Citrus Sinensis ID: 019979
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 333 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LJU7 | 437 | Purple acid phosphatase 1 | yes | no | 0.993 | 0.757 | 0.764 | 1e-153 | |
| Q8S340 | 434 | Purple acid phosphatase 2 | no | no | 0.924 | 0.709 | 0.644 | 1e-116 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.963 | 0.734 | 0.605 | 1e-109 | |
| Q9LXI7 | 427 | Probable purple acid phos | no | no | 0.972 | 0.758 | 0.571 | 1e-104 | |
| Q949Y3 | 475 | Bifunctional purple acid | no | no | 0.888 | 0.623 | 0.429 | 1e-62 | |
| O23244 | 466 | Purple acid phosphatase 2 | no | no | 0.996 | 0.712 | 0.404 | 5e-61 | |
| Q93WP4 | 481 | Phosphoenolpyruvate phosp | N/A | no | 0.888 | 0.615 | 0.453 | 1e-60 | |
| Q6TPH1 | 458 | Purple acid phosphatase 2 | no | no | 0.879 | 0.639 | 0.404 | 2e-60 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.987 | 0.707 | 0.405 | 2e-59 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.984 | 0.703 | 0.397 | 2e-59 |
| >sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 541 bits (1394), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/331 (76%), Positives = 280/331 (84%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
L V + I + +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T
Sbjct: 7 LLLVTLSVSIIFTSAAADDYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D+SSPS VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +
Sbjct: 67 NDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGE 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+W
Sbjct: 127 GPEFHLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD 242
DTFGELVQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNLYYSF+
Sbjct: 187 DTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLYYSFE 246
Query: 243 VAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD 302
VAG H IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD
Sbjct: 247 VAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGD 306
Query: 303 GMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
MMA MEPLLYA+ VD+V GHVHAYER+ R
Sbjct: 307 EMMAEMEPLLYASGVDIVFTGHVHAYERTKR 337
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Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|Q8S340|PPA22_ARATH Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1 | Back alignment and function description |
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Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/309 (64%), Positives = 232/309 (75%), Gaps = 1/309 (0%)
Query: 26 QPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAE 85
QP R + F + + S PQQVHISLAG HMRVT+IT+D SVVEYG PG Y+ A
Sbjct: 30 QPPRPIVFVHNDRSKSDPQQVHISLAGKDHMRVTFITEDNKVESVVEYGKQPGKYDGKAT 89
Query: 86 GESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEFKTPPAQFPITFAVAGDL 145
GE TSY+Y FY+SGKIHH IGPL+ +T Y+YRCG GPEF FKTPP+ FP+ FA+ GDL
Sbjct: 90 GECTSYKYFFYKSGKIHHVKIGPLQANTTYYYRCGGNGPEFSFKTPPSTFPVEFAIVGDL 149
Query: 146 GQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNH 205
GQT WT +TL HI YDV LLPGDLSYAD Q WD+FG LV+PLAS RPWMVT+GNH
Sbjct: 150 GQTEWTAATLSHINSQDYDVFLLPGDLSYADTHQPLWDSFGRLVEPLASKRPWMVTEGNH 209
Query: 206 EKESIPLI-MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQY 264
E E P+I F+SYNARW MP ES S SNLYYSFDVAG H +MLGSY D+D SDQY
Sbjct: 210 EIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQY 269
Query: 265 RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGH 324
+WL+ DL+KVDRK TPW++VLLH PWYN+NEAH+GEG+ M ME LL+ A VD+V +GH
Sbjct: 270 QWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLLFNARVDVVFSGH 329
Query: 325 VHAYERSVR 333
VHAYER R
Sbjct: 330 VHAYERFKR 338
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
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Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/327 (60%), Positives = 234/327 (71%), Gaps = 6/327 (1%)
Query: 9 AFVFISATVTTAEY----IRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDD 64
+ F+S V A Y RP PR L +P +PQQVHISLAG HMRVT+ TDD
Sbjct: 14 SLFFLSPFVCQANYDSNFTRPPPR-PLFIVSHGRPKFYPQQVHISLAGKDHMRVTYTTDD 72
Query: 65 ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGP 124
+ S+VEYG P Y+ GESTSY Y FY SGKIHH IGPL+ +T Y+YRCG G
Sbjct: 73 LNVASMVEYGKHPKKYDKKTAGESTSYTYFFYNSGKIHHVKIGPLKPNTKYYYRCGGHGD 132
Query: 125 EFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDT 184
EF FKTPP++FPI FAVAGDLGQT WT TLD I + +DV LLPGDLSYAD Q WD+
Sbjct: 133 EFSFKTPPSKFPIEFAVAGDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYADTHQPLWDS 192
Query: 185 FGELVQPLASARPWMVTQGNHEKESIPLIMD-AFQSYNARWKMPFEESGSNSNLYYSFDV 243
FG L++ LAS RPWMVT+GNHE ES P +F+SYNARW MP ES S+SNLYYSFDV
Sbjct: 193 FGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPHAESLSHSNLYYSFDV 252
Query: 244 AGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDG 303
AG H +MLGSY Y+ +SDQY WL+ DL KVDRKKTPWL+V++H PWY++N+AH GEG+
Sbjct: 253 AGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTNKAHYGEGEK 312
Query: 304 MMAIMEPLLYAASVDLVLAGHVHAYER 330
M + +E LLY A VD+V AGHVH YER
Sbjct: 313 MRSALESLLYRAQVDVVFAGHVHTYER 339
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1 | Back alignment and function description |
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Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/336 (57%), Positives = 237/336 (70%), Gaps = 12/336 (3%)
Query: 7 LTAFVFISATVTTAEYIRPQPRRTLEF-PWDPKPSSHPQQVHISLAGDSHMRVTWITDDE 65
L A + I Y R R+ L P + + P QVHISL G MR++WIT
Sbjct: 7 LVAILLIVLAGNVLSYDRQGTRKNLVIHPTNEDDPTFPDQVHISLVGPDKMRISWITQSS 66
Query: 66 SSPSVVEYGTSPGGYNCGAEGESTSYRYLF-YRSGKIHHTVIGPLEHDTVYFYRCGRQGP 124
SPSVV YGT G Y A G S+SY YL YRSG+I+ VIGPL+ +TVY+Y+CG GP
Sbjct: 67 ISPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCG--GP 123
Query: 125 ----EFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
EF F+TPP++FPI FAV+GDLG + W+KSTL+H+ + YDV +LPGDLSYA+ Q
Sbjct: 124 SSTQEFSFRTPPSKFPIKFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMYQP 183
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARWKMPFEESGSNSNLYY 239
WDTFG LVQPLAS RPWMVT GNHE E IP++ + F +YN RW+MPFEESGS+SNLYY
Sbjct: 184 LWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSNLYY 243
Query: 240 SFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG 299
SF+V G H+IMLGSY D++ S+QY+WL+++L K+DRK TPW++ ++H PWYNSNEAHQG
Sbjct: 244 SFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQG 303
Query: 300 EGDG--MMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
E + M ME LLY A VDLV AGHVHAYER R
Sbjct: 304 EKESVEMKESMETLLYKARVDLVFAGHVHAYERFSR 339
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q949Y3|PPA26_ARATH Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1 | Back alignment and function description |
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Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 189/312 (60%), Gaps = 16/312 (5%)
Query: 37 PKPSSHPQQVHISLAGD---SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
PK + PQQVHI+ GD + ++W+T DE S V YG G Y A+G +Y +
Sbjct: 48 PKGYNAPQQVHIT-QGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTF 106
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRC--GRQGPEFEFKTPPAQFP---ITFAVAGDLGQT 148
Y+SG IHH ++ LEHDT Y+Y+ G EF F TPP P F + GD+GQT
Sbjct: 107 YKYKSGFIHHCLVSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQT 166
Query: 149 GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH-----RWDTFGELVQPLASARPWMVTQG 203
+ STL+H + L GDLSYAD Q+ RWD++G V+ + +PW+ + G
Sbjct: 167 FNSLSTLEHYMESGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAG 226
Query: 204 NHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYS 261
NHE + +P + + F++Y R+ P+ S S+S L+Y+ A AH+I+L SY+ + +Y+
Sbjct: 227 NHEVDYMPYMGEVTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYT 286
Query: 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVL 321
Q+ WL ++L++VDR+KTPWL+VL+HVP YNSNEAH EG+ M A E VD++
Sbjct: 287 PQWHWLSEELTRVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIF 346
Query: 322 AGHVHAYERSVR 333
AGHVHAYERS R
Sbjct: 347 AGHVHAYERSYR 358
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Metallo-phosphoesterase involved in phosphate metabolism. Acid phosphatase activity with phosphoenolpyruvate, inorganic pyrophosphate, phenyl-phosphate and p-nitrophenyl-phosphate as the most effective substrates. No activity with phytic acid, phosphocholine or bis-p-nitrophenyl-phosphate. Has a peroxidase activity at alkaline pH. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: . EC: 7 |
| >sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 234 bits (598), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 209/361 (57%), Gaps = 29/361 (8%)
Query: 1 MELKFVLTAFVFIS-ATV----TTAEYIR-PQPRRTLEFPWDPKPSSH--PQQVHISLAG 52
M + +L FVF+S ATV TT+ ++R QP + P P+ H P+QVHI + G
Sbjct: 1 MRMNKILLVFVFLSIATVINSGTTSNFVRTAQPSTEMSLETFPSPAGHNAPEQVHI-VQG 59
Query: 53 DSHMR---VTWITD-DESSPSVVEYGTSPGG----YNCGAEGESTSYRYLFYRSGKIHHT 104
D + R ++W+T + + +VV Y + G ++SYR+ Y SG +HH
Sbjct: 60 DYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTSGFLHHA 119
Query: 105 VIGPLEHDTVYFYRCGRQGP--EFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDH-I 158
I LE+DT Y Y G G +F F +PP P TF + GDLGQT + TL H +
Sbjct: 120 TIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLYHYM 179
Query: 159 GQCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214
K L PGDLSYAD + Q +WD++G V+P A+ + ++ GNHE + +P I
Sbjct: 180 SNPKGQAVLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIG 239
Query: 215 D--AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLS 272
+ AF+ Y R+ ++ S S S L+YS A AH+I+L SY+ Y +Y+ QY WL+ +L
Sbjct: 240 EPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELK 299
Query: 273 KVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSV 332
KV+R++TPWL+V++H PWYNSN H EG+ M A+ E + VDLVL+GHVH+YERS
Sbjct: 300 KVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSE 359
Query: 333 R 333
R
Sbjct: 360 R 360
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q93WP4|PEPP_ALLCE Phosphoenolpyruvate phosphatase OS=Allium cepa GN=ACPEPP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 189/311 (60%), Gaps = 15/311 (4%)
Query: 37 PKPSSHPQQVHISLAGD---SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
PK PQQVHI+ GD + V+W+T + S V YGTSP Y+ A+G++T+Y Y
Sbjct: 54 PKNQFSPQQVHIT-QGDYDGKAVIVSWVTFIDPGKSEVVYGTSPNSYDHSAQGKTTNYTY 112
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRCGR--QGPEFEFKTPPAQFP---ITFAVAGDLGQT 148
Y SG IHH ++ LE+DT Y+Y+ G+ EF F TPP P TF + GDLGQT
Sbjct: 113 YDYTSGYIHHCLLDKLEYDTKYYYKIGKGDAAREFWFHTPPQIHPDASYTFGIIGDLGQT 172
Query: 149 GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQ----HRWDTFGELVQPLASARPWMVTQGN 204
+ STL+H + K L GDLSYAD RWD++G V+ + +PW+ T GN
Sbjct: 173 YNSLSTLEHYMKSKGQTVLFVGDLSYADRYSCNNGTRWDSWGRFVERSVAYQPWIWTVGN 232
Query: 205 HEKESIPLIMDAF--QSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSD 262
HE E P + + F ++Y R+ P S S+S L+YS A AH+I+L SY+ + +Y+
Sbjct: 233 HEIEYRPDLGEVFPFRAYLNRYPTPHLASASSSPLWYSIRRASAHIIVLSSYSPFVKYTP 292
Query: 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLA 322
Q+ WL ++L++VDR+KTPWL+VL+H P YNSNEAH EG+ M E VDLV A
Sbjct: 293 QWLWLSEELTRVDREKTPWLIVLMHAPLYNSNEAHYMEGESMRVAFESWFVQYKVDLVFA 352
Query: 323 GHVHAYERSVR 333
GHVHAYERS R
Sbjct: 353 GHVHAYERSYR 363
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Phosphoenolpyruvate phosphatase that probably operates in the vacuole to release phosphate from phosphoenolpyruvate (PEP) under phosphorus starvation. Allium cepa (taxid: 4679) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 6 EC: 0 |
| >sp|Q6TPH1|PPA23_ARATH Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 183/346 (52%), Gaps = 53/346 (15%)
Query: 40 SSHPQQVHISLAGDSHMRVTWITDD------------ESSPSVVEYGTSPGGYNCGAEGE 87
S P+Q+ ++L+ + M V+W+T D S S V YG G Y +G
Sbjct: 62 SDFPEQIALALSTPTSMWVSWVTGDAIVGKDVKPLDPSSIASEVWYGKEKGNYMLKKKGN 121
Query: 88 STSYRYLF-------YRSGKIHHTVIGPLEHDTVYFYRCG-----RQGPEFEFKTPPA-- 133
+T Y L+ Y SG IHH +I LE +T Y+YRCG E F+T P
Sbjct: 122 ATVYSQLYPSDGLLNYTSGIIHHVLIDGLEPETRYYYRCGDSSVPAMSEEISFETLPLPS 181
Query: 134 --QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYM------------- 178
+P A GDLG T T +T+DH+ + + ++ GDL+YA+
Sbjct: 182 KDAYPHRIAFVGDLGLTSNTTTTIDHLMENDPSLVIIVGDLTYANQYRTIGGKGVPCFSC 241
Query: 179 -----------QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMP 227
Q RWD +G ++PL S P MV +GNHE E + F+SY+ R+ +P
Sbjct: 242 SFPDAPIRETYQPRWDAWGRFMEPLTSKVPTMVIEGNHEIEPQASGI-TFKSYSERFAVP 300
Query: 228 FEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLH 287
ESGSNSNLYYSFD G H +MLG+Y DY+ QY WLK+DLSKVDR TPWL+ +H
Sbjct: 301 ASESGSNSNLYYSFDAGGVHFVMLGAYVDYNNTGLQYAWLKEDLSKVDRAVTPWLVATMH 360
Query: 288 VPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
PWYNS +H E + M ME LLY VD+V AGHVHAYER R
Sbjct: 361 PPWYNSYSSHYQEFECMRQEMEELLYQYRVDIVFAGHVHAYERMNR 406
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Acid phosphatase activity with ATP, ADP, dATP, pyrophosphate, polyphosphate, phosphoserine and phosphothreonine. Low or no activity with phosphotyrosine, AMP and phytate. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 195/353 (55%), Gaps = 24/353 (6%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWD------PKPSSHPQQVHISLAGD--- 53
L VL A + + T+ +IR + +T++ P D P + PQQVHI+ GD
Sbjct: 11 LAVVLAAVMNAAIAGITSSFIR-KVEKTVDMPLDSDVFRVPPGYNAPQQVHIT-QGDHVG 68
Query: 54 SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113
M V+W+T DE S V Y + + A G +Y Y Y SG IHH I LE++T
Sbjct: 69 KAMIVSWVTVDEPGSSKVVYWSENSQHKKVARGNIRTYTYFNYTSGYIHHCTIRNLEYNT 128
Query: 114 VYFYRCG--RQGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIGQ--CKYDVH 166
Y+Y G F F TPP P TF + GDLGQ+ + TL H + K
Sbjct: 129 KYYYEVGIGNTTRSFWFTTPPEVGPDVPYTFGLIGDLGQSFDSNRTLTHYERNPIKGQAV 188
Query: 167 LLPGDLSYAD-YMQH---RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA--FQSY 220
L GDLSYAD Y H RWDT+G V+ + +PW+ T GNHE + P I + F+ +
Sbjct: 189 LFVGDLSYADNYPNHDNVRWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPF 248
Query: 221 NARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTP 280
R+ +P++ SGS +Y A A++I+L SY+ Y +Y+ QY+WL+++L KV+R +TP
Sbjct: 249 TKRYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETP 308
Query: 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
WL+VL+H PWYNS H EG+ M + EP VDLV AGHVHAYERS R
Sbjct: 309 WLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSER 361
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 206/360 (57%), Gaps = 32/360 (8%)
Query: 4 KFVLTAFVFISATVT-----TAEYIRPQPRRTLEFPWDPKPS----SHPQQVHISLAGDS 54
V+ AF+F+S T T++++R Q ++E D PS + P+QVH++ GD
Sbjct: 3 NLVIFAFLFLSITTVINGGITSKFVR-QALPSIEMSLDTFPSPGGYNTPEQVHLT-QGDH 60
Query: 55 HMR---VTWITD-DESSPSVVEYGTSPGGYNCG-----AEGESTSYRYLFYRSGKIHHTV 105
R V+W+T + + +VV Y + G + A + SYR+ Y SG +HH
Sbjct: 61 DGRGMIVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLHHAT 120
Query: 106 IGPLEHDTVYFYRCG--RQGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDH-IG 159
I LE+DT Y Y G + +F F TPP P TF + GDLGQT + TL H +
Sbjct: 121 IKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMS 180
Query: 160 QCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD 215
K L GDLSYAD + Q +WDT+G ++P A+ +P++ GNHE + +P I +
Sbjct: 181 NPKGQAVLFAGDLSYADDHPNHDQRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGE 240
Query: 216 --AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSK 273
AF+ Y R+ ++ S S S L+YS A AH+I+L SY+ Y +Y+ QY WL+ +L
Sbjct: 241 PHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKN 300
Query: 274 VDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
V+R++TPWL+V++H PWYNSN H EG+ M + E L + VDLVL+GHVHAYERS R
Sbjct: 301 VNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSER 360
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 333 | ||||||
| 358248462 | 469 | uncharacterized protein LOC100782338 [Gl | 1.0 | 0.710 | 0.791 | 1e-158 | |
| 187949279 | 435 | purple acid phosphatase [Glycine max] | 1.0 | 0.765 | 0.791 | 1e-158 | |
| 357459553 | 433 | Purple acid phosphatase [Medicago trunca | 1.0 | 0.769 | 0.783 | 1e-156 | |
| 224126441 | 432 | predicted protein [Populus trichocarpa] | 0.996 | 0.768 | 0.774 | 1e-154 | |
| 357601490 | 437 | PAP18 [Gossypium hirsutum] | 0.942 | 0.718 | 0.812 | 1e-154 | |
| 22331208 | 437 | purple acid phosphatase 18 [Arabidopsis | 0.993 | 0.757 | 0.764 | 1e-151 | |
| 224117498 | 432 | predicted protein [Populus trichocarpa] | 0.996 | 0.768 | 0.768 | 1e-151 | |
| 25229112 | 437 | putative purple acid phosphatase [Arabid | 0.993 | 0.757 | 0.761 | 1e-151 | |
| 357494441 | 439 | Purple acid phosphatase [Medicago trunca | 0.960 | 0.728 | 0.776 | 1e-149 | |
| 388506104 | 436 | unknown [Lotus japonicus] | 0.993 | 0.759 | 0.772 | 1e-149 |
| >gi|358248462|ref|NP_001239630.1| uncharacterized protein LOC100782338 [Glycine max] gi|304421382|gb|ADM32490.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 265/335 (79%), Positives = 295/335 (88%), Gaps = 2/335 (0%)
Query: 1 MELKFVL-TAFVFISATVTTA-EYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRV 58
MELK +L T + +S + T A +YIRPQPR+T PW KPSS+PQQVHISLAG+ HMRV
Sbjct: 35 MELKLLLITVLMMVSLSATAAADYIRPQPRKTFHLPWHSKPSSYPQQVHISLAGEQHMRV 94
Query: 59 TWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118
TWITDD S+PS+VEYGTSPG Y+ AEGE+TSY YL Y SGKIHHTVIGPLEH++VY+YR
Sbjct: 95 TWITDDNSAPSIVEYGTSPGRYDSVAEGETTSYSYLLYSSGKIHHTVIGPLEHNSVYYYR 154
Query: 119 CGRQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYM 178
CG QGP+F+ +TPPAQ PITFAVAGDLGQTGWTKSTLDHI QCKY+VHLLPGDLSYADY+
Sbjct: 155 CGGQGPQFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLSYADYI 214
Query: 179 QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLY 238
QHRWD+FG LVQPLASARPWMVTQGNHE ESIPL+ D F SYN+RWKMPFEESGSNSNLY
Sbjct: 215 QHRWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFLSYNSRWKMPFEESGSNSNLY 274
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSF+VAG H+IMLGSYADYDEYS+QY WLK+DLSKVDR++TPWL+VL HVPWYNSN AHQ
Sbjct: 275 YSFEVAGVHIIMLGSYADYDEYSEQYGWLKEDLSKVDRERTPWLIVLFHVPWYNSNTAHQ 334
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
GEG MMA MEPLLYAAS DLVLAGHVHAYERS R
Sbjct: 335 GEGADMMASMEPLLYAASADLVLAGHVHAYERSKR 369
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|187949279|gb|ACD43082.1| purple acid phosphatase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 265/335 (79%), Positives = 295/335 (88%), Gaps = 2/335 (0%)
Query: 1 MELKFVL-TAFVFISATVTTA-EYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRV 58
MELK +L T + +S + T A +YIRPQPR+T PW KPSS+PQQVHISLAG+ HMRV
Sbjct: 1 MELKLLLITVLMMVSLSATAAADYIRPQPRKTFHLPWHSKPSSYPQQVHISLAGEQHMRV 60
Query: 59 TWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118
TWITDD S+PS+VEYGTSPG Y+ AEGE+TSY YL Y SGKIHHTVIGPLEH++VY+YR
Sbjct: 61 TWITDDNSAPSIVEYGTSPGRYDSVAEGETTSYSYLLYSSGKIHHTVIGPLEHNSVYYYR 120
Query: 119 CGRQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYM 178
CG QGP+F+ +TPPAQ PITFAVAGDLGQTGWTKSTLDHI QCKY+VHLLPGDLSYADY+
Sbjct: 121 CGGQGPQFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLSYADYI 180
Query: 179 QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLY 238
QHRWD+FG LVQPLASARPWMVTQGNHE ESIPL+ D F SYN+RWKMPFEESGSNSNLY
Sbjct: 181 QHRWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFLSYNSRWKMPFEESGSNSNLY 240
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSF+VAG H+IMLGSYADYDEYS+QY WLK+DLSKVDR++TPWL+VL HVPWYNSN AHQ
Sbjct: 241 YSFEVAGVHIIMLGSYADYDEYSEQYGWLKEDLSKVDRERTPWLIVLFHVPWYNSNTAHQ 300
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
GEG MMA MEPLLYAAS DLVLAGHVHAYERS R
Sbjct: 301 GEGADMMASMEPLLYAASADLVLAGHVHAYERSKR 335
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357459553|ref|XP_003600057.1| Purple acid phosphatase [Medicago truncatula] gi|355489105|gb|AES70308.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 261/333 (78%), Positives = 290/333 (87%)
Query: 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTW 60
M+LK + T + +S T T +Y+RPQPR+TL PW KPSS+PQQVHISLAGD HMRVTW
Sbjct: 1 MKLKLIPTVLLILSVTSTADDYVRPQPRKTLHLPWHSKPSSYPQQVHISLAGDKHMRVTW 60
Query: 61 ITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120
ITDD+S+PSVVEYGT PG Y+ AEGE+TSY Y+FY SGKIHHTVIGPLE ++VYFYRCG
Sbjct: 61 ITDDKSAPSVVEYGTLPGKYDNVAEGETTSYSYIFYSSGKIHHTVIGPLEPNSVYFYRCG 120
Query: 121 RQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
GPEFE KTPPAQFPI+FAV GDLGQTGWTKSTLDHI QCKYDV+L+PGDLSYADY+QH
Sbjct: 121 GLGPEFELKTPPAQFPISFAVVGDLGQTGWTKSTLDHIDQCKYDVNLIPGDLSYADYIQH 180
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYS 240
RWDTFG LVQPLAS+RPWMVTQGNHE E IPL+ D F SYN+RWKMPFEESGS+SNLYYS
Sbjct: 181 RWDTFGRLVQPLASSRPWMVTQGNHEVEHIPLLKDGFISYNSRWKMPFEESGSSSNLYYS 240
Query: 241 FDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE 300
F+VAGAH+IMLGSY DYD YS+QY+WLK DLSKVDRK+TPWLLV+ HVPWYNSN AHQGE
Sbjct: 241 FEVAGAHIIMLGSYDDYDVYSEQYKWLKTDLSKVDRKRTPWLLVIFHVPWYNSNTAHQGE 300
Query: 301 GDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
G MM MEPLLYAASVDLV AGHVHAYERS R
Sbjct: 301 GGDMMETMEPLLYAASVDLVFAGHVHAYERSKR 333
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224126441|ref|XP_002319839.1| predicted protein [Populus trichocarpa] gi|222858215|gb|EEE95762.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 258/333 (77%), Positives = 292/333 (87%), Gaps = 1/333 (0%)
Query: 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTW 60
ME K VL F+ ISA T EYIRP PR+TL FPW+ K SSHPQQVHISLAGD HMRV+W
Sbjct: 1 MEPKLVLFVFLLISAAAT-CEYIRPPPRKTLHFPWNSKLSSHPQQVHISLAGDKHMRVSW 59
Query: 61 ITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120
+++D+S+ +VEYGTSPG Y+ ++GESTSY YLFY SGKIHHT+IGPLE +TVY+YRCG
Sbjct: 60 VSNDKSTLPMVEYGTSPGRYSNKSQGESTSYSYLFYSSGKIHHTIIGPLEDNTVYYYRCG 119
Query: 121 RQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
GPE++ KTPPAQFP+ FAVAGDLGQTGWTKSTLDHI CKYDVHLLPGDLSYADY+QH
Sbjct: 120 GGGPEYKLKTPPAQFPVMFAVAGDLGQTGWTKSTLDHIDLCKYDVHLLPGDLSYADYIQH 179
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYS 240
RWDTFGELV+PLASARPWMVTQGNHEKESI D FQSYN+RWKMP+EESGS+SNLYYS
Sbjct: 180 RWDTFGELVEPLASARPWMVTQGNHEKESIMFFKDGFQSYNSRWKMPYEESGSSSNLYYS 239
Query: 241 FDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE 300
F+VAGAH+IMLGSY DYDE+SDQY WLK D++KVDRKKTPWL+VL HVPWYNSNEAHQ E
Sbjct: 240 FEVAGAHIIMLGSYTDYDEHSDQYNWLKADVAKVDRKKTPWLIVLFHVPWYNSNEAHQDE 299
Query: 301 GDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
GD M+A MEPLL+AASVD+VLAGHVHAYER+ R
Sbjct: 300 GDRMLAAMEPLLHAASVDIVLAGHVHAYERTER 332
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357601490|gb|AET86955.1| PAP18 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/314 (81%), Positives = 273/314 (86%)
Query: 20 AEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGG 79
+Y+RPQPR+TL FPW PK S P QVHISLAG++HMR++WITDD S+PS+VEYGT PG
Sbjct: 24 TDYVRPQPRKTLHFPWKPKHPSLPHQVHISLAGENHMRISWITDDNSAPSIVEYGTLPGQ 83
Query: 80 YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEFKTPPAQFPITF 139
Y + GE+ SY YLFY SGKIHHTVIGPLEHDT+YFYRCG QGPEF+ KTPP QFP+TF
Sbjct: 84 YTFSSSGETASYNYLFYSSGKIHHTVIGPLEHDTIYFYRCGGQGPEFQLKTPPGQFPVTF 143
Query: 140 AVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWM 199
AVAGDLGQTGWTKSTLDHI QCKYDVHLLPGDLSYAD MQH WD FGELVQPLASARPWM
Sbjct: 144 AVAGDLGQTGWTKSTLDHIDQCKYDVHLLPGDLSYADCMQHLWDNFGELVQPLASARPWM 203
Query: 200 VTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDE 259
VTQGNHEKE IP DAF+SYNARWKMPFEES S SNLYYSF+VAG H+IMLGSY DYDE
Sbjct: 204 VTQGNHEKEKIPFFTDAFESYNARWKMPFEESESTSNLYYSFEVAGVHVIMLGSYTDYDE 263
Query: 260 YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDL 319
SDQY WLK DLSKVDRKKTPWL+VL HVPWYNSN AHQGEGDGMMA MEPLLYAA VDL
Sbjct: 264 LSDQYSWLKADLSKVDRKKTPWLVVLFHVPWYNSNHAHQGEGDGMMAAMEPLLYAAGVDL 323
Query: 320 VLAGHVHAYERSVR 333
V AGHVHAYERS R
Sbjct: 324 VFAGHVHAYERSKR 337
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22331208|ref|NP_188686.2| purple acid phosphatase 18 [Arabidopsis thaliana] gi|75273656|sp|Q9LJU7.1|PPA18_ARATH RecName: Full=Purple acid phosphatase 18; Flags: Precursor gi|11994138|dbj|BAB01159.1| purple acid phosphatase-like protein [Arabidopsis thaliana] gi|17064824|gb|AAL32566.1| purple acid phosphatase-like protein [Arabidopsis thaliana] gi|20259848|gb|AAM13271.1| purple acid phosphatase-like protein [Arabidopsis thaliana] gi|332642867|gb|AEE76388.1| purple acid phosphatase 18 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 253/331 (76%), Positives = 280/331 (84%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
L V + I + +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T
Sbjct: 7 LLLVTLSVSIIFTSAAADDYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D+SSPS VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +
Sbjct: 67 NDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGE 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+W
Sbjct: 127 GPEFHLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD 242
DTFGELVQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNLYYSF+
Sbjct: 187 DTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLYYSFE 246
Query: 243 VAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD 302
VAG H IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD
Sbjct: 247 VAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGD 306
Query: 303 GMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
MMA MEPLLYA+ VD+V GHVHAYER+ R
Sbjct: 307 EMMAEMEPLLYASGVDIVFTGHVHAYERTKR 337
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224117498|ref|XP_002317591.1| predicted protein [Populus trichocarpa] gi|222860656|gb|EEE98203.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/333 (76%), Positives = 286/333 (85%), Gaps = 1/333 (0%)
Query: 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTW 60
ME K VL F+ ISAT + EYIRP R+ L+F K SSHPQQVHISLAGD HMRV+W
Sbjct: 1 MEPKLVLALFLLISATAAS-EYIRPSTRKNLDFSRPSKSSSHPQQVHISLAGDKHMRVSW 59
Query: 61 ITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120
+TDD+S+ S+VEYGTSPG Y+ A GEST Y YLFY SGKIHHTVIGPLE + VY+YRCG
Sbjct: 60 VTDDKSAASMVEYGTSPGRYSNIALGESTWYSYLFYSSGKIHHTVIGPLEDNAVYYYRCG 119
Query: 121 RQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
GPE++ KTPPAQFP+TFAVAGDLGQTGWT+STLDHI QCKYDVHLLPGDLSYADYMQH
Sbjct: 120 GGGPEYKLKTPPAQFPVTFAVAGDLGQTGWTQSTLDHIDQCKYDVHLLPGDLSYADYMQH 179
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYS 240
WDTFGELV+PLASARPWMVTQGNHE+ESIP + D F+ YN+RWKMPFEESGS+SNLYYS
Sbjct: 180 LWDTFGELVEPLASARPWMVTQGNHERESIPFLKDGFEPYNSRWKMPFEESGSSSNLYYS 239
Query: 241 FDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE 300
F+V+GAH+IMLGSY YDEYS+QY WL+ DL+KVDR KTPWLLVL HVPWYNSNEAHQ E
Sbjct: 240 FEVSGAHIIMLGSYTGYDEYSNQYNWLEADLAKVDRNKTPWLLVLFHVPWYNSNEAHQNE 299
Query: 301 GDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
GD MM MEPLLYAASVD+VLAGHVHAYER+ R
Sbjct: 300 GDRMMEAMEPLLYAASVDIVLAGHVHAYERTER 332
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|25229112|gb|AAN74649.1| putative purple acid phosphatase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/331 (76%), Positives = 279/331 (84%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
L V + I + +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T
Sbjct: 7 LLLVTLSVSIIFTSAAADDYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D+SSPS VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +
Sbjct: 67 NDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGE 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+W
Sbjct: 127 GPEFHLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD 242
DTFGELVQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNL YSF+
Sbjct: 187 DTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLNYSFE 246
Query: 243 VAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD 302
VAG H IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD
Sbjct: 247 VAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGD 306
Query: 303 GMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
MMA MEPLLYA+ VD+V GHVHAYER+ R
Sbjct: 307 EMMAEMEPLLYASGVDIVFTGHVHAYERTKR 337
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357494441|ref|XP_003617509.1| Purple acid phosphatase [Medicago truncatula] gi|355518844|gb|AET00468.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 250/322 (77%), Positives = 284/322 (88%), Gaps = 2/322 (0%)
Query: 14 SATVTTAEYIRPQPRRTLE--FPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVV 71
S+TVT +Y+RP PR+ L +PWD K +PQQVHISLAGD HMR+TWITDD+ SPS V
Sbjct: 18 SSTVTADQYVRPLPRKNLNIPWPWDSKSQPYPQQVHISLAGDRHMRITWITDDKHSPSFV 77
Query: 72 EYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEFKTP 131
EYGT PG Y+ +EGE TSY Y+ Y SGKIHHTVIGPLE++T+YFYRCG QGPEF+ KTP
Sbjct: 78 EYGTLPGRYDSISEGEFTSYNYMLYSSGKIHHTVIGPLEYNTMYFYRCGGQGPEFKLKTP 137
Query: 132 PAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQP 191
P++FPITFAVAGDLGQTGWTKSTLDHI QCKYDV+LLPGDLSYAD MQH WD+FG LV+P
Sbjct: 138 PSKFPITFAVAGDLGQTGWTKSTLDHIDQCKYDVYLLPGDLSYADCMQHLWDSFGRLVEP 197
Query: 192 LASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIML 251
LASARPWMVT+GNHE+E+IPL+ D F SYN+RWKMPFEESGS SNLYYSF+VAG H+IML
Sbjct: 198 LASARPWMVTEGNHEEENIPLLTDEFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHVIML 257
Query: 252 GSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPL 311
GSYADYD+YS+QYRWLK+DLSKVDRK+TPWL+VL HVPWYNSN+AHQG GD MM +MEPL
Sbjct: 258 GSYADYDKYSEQYRWLKEDLSKVDRKRTPWLVVLFHVPWYNSNKAHQGAGDDMMTVMEPL 317
Query: 312 LYAASVDLVLAGHVHAYERSVR 333
LYAASVDLVLAGHVHAYERS R
Sbjct: 318 LYAASVDLVLAGHVHAYERSKR 339
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388506104|gb|AFK41118.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/338 (77%), Positives = 287/338 (84%), Gaps = 7/338 (2%)
Query: 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEFPW----DPKPSSHPQQVHISLAGDSHM 56
MELK VL ISATVT AEYIRPQPR+TL PW + K S+P QVHISLAGD HM
Sbjct: 1 MELKLVLI-LTLISATVT-AEYIRPQPRKTLHIPWPLDSNSKSQSYPHQVHISLAGDKHM 58
Query: 57 RVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115
R+TWITDD+ +SPS V+YG PG Y+ AEGESTSY YL Y SGKIHHTVIGPLE +TVY
Sbjct: 59 RITWITDDKHNSPSFVQYGILPGKYDSIAEGESTSYNYLLYSSGKIHHTVIGPLEDNTVY 118
Query: 116 FYRCGRQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYA 175
FYRCG QG EF+ KTPPAQFP TFAVAGDLGQTGWT+STLDHI +CKYDV+LLPGDLSYA
Sbjct: 119 FYRCGGQGHEFQLKTPPAQFPSTFAVAGDLGQTGWTESTLDHIDRCKYDVYLLPGDLSYA 178
Query: 176 DYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNS 235
D MQH WDTFG+LV+PLAS RPWMVT+GNH +ES+ +MD F SYN+RWKMPFEESGS S
Sbjct: 179 DCMQHLWDTFGKLVEPLASTRPWMVTEGNHVEESMLSLMDGFVSYNSRWKMPFEESGSTS 238
Query: 236 NLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295
NLYYSF+VAG H+IMLGSYADYD YS+QYRWLK+DLSKVDRKKTPWLLVL HVPWYNSN+
Sbjct: 239 NLYYSFEVAGVHVIMLGSYADYDVYSEQYRWLKEDLSKVDRKKTPWLLVLFHVPWYNSNK 298
Query: 296 AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
AHQG GD MMA MEPLLYAA VDLV+AGHVHAYERS R
Sbjct: 299 AHQGAGDDMMAAMEPLLYAAGVDLVIAGHVHAYERSKR 336
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 333 | ||||||
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.969 | 0.739 | 0.778 | 1.4e-144 | |
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.987 | 0.758 | 0.608 | 7.8e-110 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.975 | 0.743 | 0.599 | 5.3e-104 | |
| TAIR|locus:2083288 | 427 | PAP20 [Arabidopsis thaliana (t | 0.972 | 0.758 | 0.571 | 9.1e-100 | |
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.888 | 0.623 | 0.429 | 1.1e-62 | |
| UNIPROTKB|Q09131 | 464 | PAP "Purple acid phosphatase" | 0.888 | 0.637 | 0.428 | 5.7e-59 | |
| TAIR|locus:2098500 | 532 | PAP15 "purple acid phosphatase | 0.462 | 0.289 | 0.509 | 3.3e-55 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.750 | 0.536 | 0.442 | 4.3e-54 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.738 | 0.527 | 0.445 | 1.1e-53 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.870 | 0.619 | 0.397 | 1.1e-53 |
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 253/325 (77%), Positives = 280/325 (86%)
Query: 9 AFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSP 68
+ +F SA +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T+D+SSP
Sbjct: 15 SIIFTSAAAD--DYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVTNDKSSP 72
Query: 69 SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEF 128
S VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +GPEF
Sbjct: 73 SFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGEGPEFHL 132
Query: 129 KTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGEL 188
KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+WDTFGEL
Sbjct: 133 KTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKWDTFGEL 192
Query: 189 VQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHL 248
VQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNLYYSF+VAG H
Sbjct: 193 VQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLYYSFEVAGVHA 252
Query: 249 IMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIM 308
IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD MMA M
Sbjct: 253 IMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEM 312
Query: 309 EPLLYAASVDLVLAGHVHAYERSVR 333
EPLLYA+ VD+V GHVHAYER+ R
Sbjct: 313 EPLLYASGVDIVFTGHVHAYERTKR 337
|
|
| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1085 (387.0 bits), Expect = 7.8e-110, P = 7.8e-110
Identities = 202/332 (60%), Positives = 242/332 (72%)
Query: 5 FVLTAFVFISATVTTAEY--IRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
F+ +F+ ++ A+ + QP R + F + + S PQQVHISLAG HMRVT+IT
Sbjct: 7 FLSFTLLFLCPFISQADVPELSRQPPRPIVFVHNDRSKSDPQQVHISLAGKDHMRVTFIT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D SVVEYG PG Y+ A GE TSY+Y FY+SGKIHH IGPL+ +T Y+YRCG
Sbjct: 67 EDNKVESVVEYGKQPGKYDGKATGECTSYKYFFYKSGKIHHVKIGPLQANTTYYYRCGGN 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF FKTPP+ FP+ FA+ GDLGQT WT +TL HI YDV LLPGDLSYAD Q W
Sbjct: 127 GPEFSFKTPPSTFPVEFAIVGDLGQTEWTAATLSHINSQDYDVFLLPGDLSYADTHQPLW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDA-FQSYNARWKMPFEESGSNSNLYYSF 241
D+FG LV+PLAS RPWMVT+GNHE E P+I F+SYNARW MP ES S SNLYYSF
Sbjct: 187 DSFGRLVEPLASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSF 246
Query: 242 DVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEG 301
DVAG H +MLGSY D+D SDQY+WL+ DL+KVDRK TPW++VLLH PWYN+NEAH+GEG
Sbjct: 247 DVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEG 306
Query: 302 DGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
+ M ME LL+ A VD+V +GHVHAYER R
Sbjct: 307 ESMREAMESLLFNARVDVVFSGHVHAYERFKR 338
|
|
| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 199/332 (59%), Positives = 238/332 (71%)
Query: 5 FVLT-AFVFISATVTTAEY----IRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVT 59
F+++ + F+S V A Y RP PR L +P +PQQVHISLAG HMRVT
Sbjct: 9 FLISFSLFFLSPFVCQANYDSNFTRPPPR-PLFIVSHGRPKFYPQQVHISLAGKDHMRVT 67
Query: 60 WITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119
+ TDD + S+VEYG P Y+ GESTSY Y FY SGKIHH IGPL+ +T Y+YRC
Sbjct: 68 YTTDDLNVASMVEYGKHPKKYDKKTAGESTSYTYFFYNSGKIHHVKIGPLKPNTKYYYRC 127
Query: 120 GRQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQ 179
G G EF FKTPP++FPI FAVAGDLGQT WT TLD I + +DV LLPGDLSYAD Q
Sbjct: 128 GGHGDEFSFKTPPSKFPIEFAVAGDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYADTHQ 187
Query: 180 HRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD-AFQSYNARWKMPFEESGSNSNLY 238
WD+FG L++ LAS RPWMVT+GNHE ES P +F+SYNARW MP ES S+SNLY
Sbjct: 188 PLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPHAESLSHSNLY 247
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSFDVAG H +MLGSY Y+ +SDQY WL+ DL KVDRKKTPWL+V++H PWY++N+AH
Sbjct: 248 YSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTNKAHY 307
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330
GEG+ M + +E LLY A VD+V AGHVH YER
Sbjct: 308 GEGEKMRSALESLLYRAQVDVVFAGHVHTYER 339
|
|
| TAIR|locus:2083288 PAP20 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 192/336 (57%), Positives = 237/336 (70%)
Query: 7 LTAFVFISATVTTAEYIRPQPRRTLEF-PWDPKPSSHPQQVHISLAGDSHMRVTWITDDE 65
L A + I Y R R+ L P + + P QVHISL G MR++WIT
Sbjct: 7 LVAILLIVLAGNVLSYDRQGTRKNLVIHPTNEDDPTFPDQVHISLVGPDKMRISWITQSS 66
Query: 66 SSPSVVEYGTSPGGYNCGAEGESTSYRYLF-YRSGKIHHTVIGPLEHDTVYFYRCGRQGP 124
SPSVV YGT G Y A G S+SY YL YRSG+I+ VIGPL+ +TVY+Y+CG GP
Sbjct: 67 ISPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCG--GP 123
Query: 125 ----EFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
EF F+TPP++FPI FAV+GDLG + W+KSTL+H+ + YDV +LPGDLSYA+ Q
Sbjct: 124 SSTQEFSFRTPPSKFPIKFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMYQP 183
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARWKMPFEESGSNSNLYY 239
WDTFG LVQPLAS RPWMVT GNHE E IP++ + F +YN RW+MPFEESGS+SNLYY
Sbjct: 184 LWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSNLYY 243
Query: 240 SFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG 299
SF+V G H+IMLGSY D++ S+QY+WL+++L K+DRK TPW++ ++H PWYNSNEAHQG
Sbjct: 244 SFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQG 303
Query: 300 EGDG--MMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
E + M ME LLY A VDLV AGHVHAYER R
Sbjct: 304 EKESVEMKESMETLLYKARVDLVFAGHVHAYERFSR 339
|
|
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 134/312 (42%), Positives = 189/312 (60%)
Query: 37 PKPSSHPQQVHISLAGDSHMR---VTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
PK + PQQVHI+ GD + ++W+T DE S V YG G Y A+G +Y +
Sbjct: 48 PKGYNAPQQVHIT-QGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTF 106
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRC--GRQGPEFEFKTPPAQFP---ITFAVAGDLGQT 148
Y+SG IHH ++ LEHDT Y+Y+ G EF F TPP P F + GD+GQT
Sbjct: 107 YKYKSGFIHHCLVSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQT 166
Query: 149 GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH-----RWDTFGELVQPLASARPWMVTQG 203
+ STL+H + L GDLSYAD Q+ RWD++G V+ + +PW+ + G
Sbjct: 167 FNSLSTLEHYMESGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAG 226
Query: 204 NHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYS 261
NHE + +P + + F++Y R+ P+ S S+S L+Y+ A AH+I+L SY+ + +Y+
Sbjct: 227 NHEVDYMPYMGEVTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYT 286
Query: 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVL 321
Q+ WL ++L++VDR+KTPWL+VL+HVP YNSNEAH EG+ M A E VD++
Sbjct: 287 PQWHWLSEELTRVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIF 346
Query: 322 AGHVHAYERSVR 333
AGHVHAYERS R
Sbjct: 347 AGHVHAYERSYR 358
|
|
| UNIPROTKB|Q09131 PAP "Purple acid phosphatase" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 134/313 (42%), Positives = 179/313 (57%)
Query: 37 PKPSSHPQQVHIS---LAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
P + PQQVHI+ L G + + V+W+T DE S V Y + AEG+ +YR+
Sbjct: 48 PPGYNAPQQVHITQGDLVGKAVI-VSWVTVDEPGSSEVHYWSENSDKKKIAEGKLVTYRF 106
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRCGRQGP--EFEFKTPPA---QFPITFAVAGDLGQT 148
Y SG IHHT I LE+ T Y+Y G +F F TPP P TF + GDLGQ+
Sbjct: 107 FNYSSGFIHHTTIRNLEYKTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQS 166
Query: 149 GWTKSTLDH--IGQCKYDVHLLPGDLSYAD-YMQH---RWDTFGELVQPLASARPWMVTQ 202
+ TL H + K L GDLSYAD Y H RWD++G + + +PW+ T
Sbjct: 167 FDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTA 226
Query: 203 GNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEY 260
GNHE P I + F+ Y R+ +P++ S S S +YS A AH+I+L SY+ Y +Y
Sbjct: 227 GNHENHFAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKY 286
Query: 261 SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLV 320
+ QY+WL+ +L KV+R +TPWL+VL+H PWYNS H EG+ M + EP VD+V
Sbjct: 287 TPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVV 346
Query: 321 LAGHVHAYERSVR 333
AGHVHAYERS R
Sbjct: 347 FAGHVHAYERSER 359
|
|
| TAIR|locus:2098500 PAP15 "purple acid phosphatase 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 420 (152.9 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 79/155 (50%), Positives = 102/155 (65%)
Query: 179 QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLY 238
Q RWD +G ++ L S P MV +GNHE E + F++Y++R+ PF ESGS+S LY
Sbjct: 252 QPRWDYWGRFMENLTSKVPLMVIEGNHEIE-LQAENKTFEAYSSRFAFPFNESGSSSTLY 310
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSF+ G H +MLG+Y YD+ ++QY WLK DL+KVDR TPWL+ H PWY+S AH
Sbjct: 311 YSFNAGGIHFVMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHY 370
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
E + M ME LLY+ D+V GHVHAYERS R
Sbjct: 371 REAECMKEAMEELLYSYGTDIVFNGHVHAYERSNR 405
|
|
| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 116/262 (44%), Positives = 159/262 (60%)
Query: 84 AEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG--RQGPEFEFKTPPA---QFPIT 138
A + SYR+ Y SG +HH I LE+DT Y Y G + +F F TPP P T
Sbjct: 99 AHASTKSYRFYDYSSGFLHHATIKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYT 158
Query: 139 FAVAGDLGQTGWTKSTLDH-IGQCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLA 193
F + GDLGQT + TL H + K L GDLSYAD + Q +WDT+G ++P A
Sbjct: 159 FGIIGDLGQTYASNETLYHYMSNPKGQAVLFAGDLSYADDHPNHDQRKWDTWGRFMEPCA 218
Query: 194 SARPWMVTQGNHEKESIPLIMD--AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIML 251
+ +P++ GNHE + +P I + AF+ Y R+ ++ S S S L+YS A AH+I+L
Sbjct: 219 AYQPFIFAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVL 278
Query: 252 GSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPL 311
SY+ Y +Y+ QY WL+ +L V+R++TPWL+V++H PWYNSN H EG+ M + E
Sbjct: 279 SSYSAYGKYTPQYIWLEQELKNVNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESW 338
Query: 312 LYAASVDLVLAGHVHAYERSVR 333
L + VDLVL+GHVHAYERS R
Sbjct: 339 LVNSKVDLVLSGHVHAYERSER 360
|
|
| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 115/258 (44%), Positives = 160/258 (62%)
Query: 88 STSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGP--EFEFKTPPA---QFPITFAVA 142
++SYR+ Y SG +HH I LE+DT Y Y G G +F F +PP P TF +
Sbjct: 103 TSSYRFYDYTSGFLHHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGII 162
Query: 143 GDLGQTGWTKSTLDH-IGQCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLASARP 197
GDLGQT + TL H + K L PGDLSYAD + Q +WD++G V+P A+ +
Sbjct: 163 GDLGQTLASNETLYHYMSNPKGQAVLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAYQT 222
Query: 198 WMVTQGNHEKESIPLIMD--AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA 255
++ GNHE + +P I + AF+ Y R+ ++ S S S L+YS A AH+I+L SY+
Sbjct: 223 FIYAAGNHEIDFVPNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYS 282
Query: 256 DYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA 315
Y +Y+ QY WL+ +L KV+R++TPWL+V++H PWYNSN H EG+ M A+ E +
Sbjct: 283 AYGKYTPQYVWLEQELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNS 342
Query: 316 SVDLVLAGHVHAYERSVR 333
VDLVL+GHVH+YERS R
Sbjct: 343 KVDLVLSGHVHSYERSER 360
|
|
| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 122/307 (39%), Positives = 173/307 (56%)
Query: 43 PQQVHISLAGDSHMR---VTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSG 99
PQQVHI+ GD + V+W+T + + V Y A G++ +Y++ Y SG
Sbjct: 59 PQQVHIT-QGDVEGKAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSG 117
Query: 100 KIHHTVIGPLEHDTVYFY--RCGRQGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKST 154
IHH I LE+DT Y+Y G+ +F F TPP P TF + GDLGQ+ + T
Sbjct: 118 FIHHCPIRNLEYDTKYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNIT 177
Query: 155 LDHI--GQCKYDVHLLPGDLSYAD-YMQH---RWDTFGELVQPLASARPWMVTQGNHEKE 208
L H K L GD+SYAD Y H RWD++G + + +PW+ T GNHE +
Sbjct: 178 LTHYENNPTKGQAVLFVGDISYADTYPDHDNRRWDSWGRFAERSTAYQPWIWTTGNHELD 237
Query: 209 SIPLIMD--AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRW 266
P I + F+ + R++ P+ SGS +YS A++I+L SY+ Y +Y+ QY+W
Sbjct: 238 FAPEIGENRPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQW 297
Query: 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVH 326
L+++ KV+R +TPWL+VL+H PWYNS + H EG+ M + E VD+V AGHVH
Sbjct: 298 LEEEFPKVNRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVH 357
Query: 327 AYERSVR 333
AYERS R
Sbjct: 358 AYERSER 364
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9LJU7 | PPA18_ARATH | 3, ., 1, ., 3, ., 2 | 0.7643 | 0.9939 | 0.7574 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | 0.963 |
| 3rd Layer | 3.6.1.13 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.3.2 | 0.946 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_fgenesh4_pg.C_LG_XIII0422 | hypothetical protein (432 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 333 | |||
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 1e-149 | |
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 8e-80 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 6e-16 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 5e-07 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 3e-06 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 5e-06 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 0.003 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 426 bits (1097), Expect = e-149
Identities = 195/334 (58%), Positives = 238/334 (71%), Gaps = 8/334 (2%)
Query: 7 LTAFVFISATVTTAEYIRPQPRRTLEF-PWDPKPSSHPQQVHISLAGDSHMRVTWITDDE 65
L A + I Y RP R+ L P + +HP QVHISL G MR++WIT D
Sbjct: 7 LVAILLIVLAGNVLSYDRPGTRKNLVIHPDNEDDPTHPDQVHISLVGPDKMRISWITQDS 66
Query: 66 SSPSVVEYGTSPGGYNCGAEGESTSYRYLF-YRSGKIHHTVIGPLEHDTVYFYRCG--RQ 122
PSVV YGT G Y A G S+SY YL YRSG+I+ VIGPL+ +TVY+Y+CG
Sbjct: 67 IPPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSS 125
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
EF F+TPP++FPI FAV+GDLG + WTKSTL+H+ + YDV +LPGDLSYA++ Q W
Sbjct: 126 TQEFSFRTPPSKFPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLW 185
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIM-DAFQSYNARWKMPFEESGSNSNLYYSF 241
DTFG LVQPLAS RPWMVT GNHE E IP++ + F +YNARW+MPFEESGS SNLYYSF
Sbjct: 186 DTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSF 245
Query: 242 DVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG-- 299
+V G H+IMLGSY D++ S+QY+WL+++L K+DRK TPW++ ++H PWYNSNEAHQG
Sbjct: 246 NVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEK 305
Query: 300 EGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
E GM ME LLY A VDLV AGHVHAYER R
Sbjct: 306 ESVGMKESMETLLYKARVDLVFAGHVHAYERFDR 339
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Length = 427 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 244 bits (626), Expect = 8e-80
Identities = 97/210 (46%), Positives = 125/210 (59%), Gaps = 11/210 (5%)
Query: 134 QFPITFAVAGDLGQ-TGWTKSTLDHIGQ--CKYDVHLLPGDLSYADY--MQHRWDTFGEL 188
P FAV GD+GQ T + +TLDH+ + YD L GDL+YAD RWDTF
Sbjct: 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQ 61
Query: 189 VQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHL 248
++PLAS P+MVT GNHE + +++ R++ P SGS SNL+YSFDV H
Sbjct: 62 IEPLASYVPYMVTPGNHEADYNFSF-YKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHF 120
Query: 249 IMLGSYADY---DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ--GEGDG 303
+ L + D+ S QY WL+ DL+KVDR KTPW++V+ H P Y SN H EG+
Sbjct: 121 VSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEK 180
Query: 304 MMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
M A +E L Y VDLVL+GHVHAYER+
Sbjct: 181 MRAALEDLFYKYGVDLVLSGHVHAYERTCP 210
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Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 74.4 bits (182), Expect = 6e-16
Identities = 38/195 (19%), Positives = 58/195 (29%), Gaps = 14/195 (7%)
Query: 138 TFAVAGDL----GQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA 193
V GDL L+ +G+ K D+ L GDL L
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGP-PSLEVLALLFALKLK 59
Query: 194 SARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS 253
+ P + +GNH+ Y +P+ +I L S
Sbjct: 60 APGPVYLVRGNHD---FDSGNSELGFYLECAGLPY------VLGNGDVSNGTVEIIGLSS 110
Query: 254 YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLY 313
+L+ + ++L+H P S ++ +E LL
Sbjct: 111 LYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEEALEDLLK 170
Query: 314 AASVDLVLAGHVHAY 328
VDLVL GH H
Sbjct: 171 DNGVDLVLRGHTHVP 185
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This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 5e-07
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 247 HLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWL-------LVLLHVPWYNSNEAHQG 299
+++LG ++ L L+ + P ++L H P Y+ +
Sbjct: 29 FVLVLGDLVGDGPDPEE--VLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSP 86
Query: 300 EGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
+ D + LL VDLVL+GH H YER
Sbjct: 87 DEDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120
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Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 3e-06
Identities = 36/155 (23%), Positives = 51/155 (32%), Gaps = 40/155 (25%)
Query: 197 PWMVTQGNHEKESIPLIMDAF--QSYNARWKMPFEESGSNSNLYYSFDVAG------AHL 248
PW + GNH+ + + + RW MP YY
Sbjct: 72 PWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEF 123
Query: 249 IML------GSYADYD---------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNS 293
IM+ G+ D +Q WL+ L+ W +V+ H P Y S
Sbjct: 124 IMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAAS---TADWKIVVGHHPIY-S 179
Query: 294 NEAHQGEGDGMMAIME--PLLYAASVDLVLAGHVH 326
+ H G + PLL VD L+GH H
Sbjct: 180 SGEH---GPTSCLVDRLLPLLKKYKVDAYLSGHDH 211
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Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 5e-06
Identities = 36/180 (20%), Positives = 63/180 (35%), Gaps = 18/180 (10%)
Query: 153 STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212
+ L I Q K D+ ++ GDL+ + EL+ L P +V GNH+ +
Sbjct: 24 ALLAAIEQLKPDLLVVTGDLTNDGEPEEY-RRLKELLARLELPAPVIVVPGNHD---ARV 79
Query: 213 IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS-YADYDE---YSDQYRWLK 268
+ S + G +I L S ++Q WL+
Sbjct: 80 VNGEAFSDQFFNRYAVLVGA--------CSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLE 131
Query: 269 DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIM--EPLLYAASVDLVLAGHVH 326
+ L+ + ++VL H P + + + + V LVL+GH+H
Sbjct: 132 EALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIH 191
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Length = 301 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.003
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 238 YYSFDVAGAHLIMLGS--YAD----YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY 291
Y+SF V G I+L S + D + Q WL++ L ++V H+PW+
Sbjct: 118 YFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWF 177
Query: 292 NSNEAHQGEGDGM----MAIMEPLL---YAASVDLVLAGHVH 326
+ E D ++ +PLL A V V +GH H
Sbjct: 178 LEDP---DEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYH 216
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 333 | |||
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.96 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.96 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.96 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.93 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.93 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.92 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.92 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.9 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.89 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.89 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.89 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.85 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.81 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.81 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.77 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.76 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.74 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.73 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.72 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.72 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.69 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.63 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.63 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.62 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.61 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.61 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.6 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.44 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.44 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.42 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.34 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.32 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.31 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.27 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.27 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.25 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.23 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.21 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.2 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.12 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.12 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.11 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.06 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.99 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.96 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.95 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.94 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.91 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.91 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.9 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.87 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.84 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.81 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.81 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.73 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.73 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.71 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.71 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.66 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.61 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.55 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.5 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.49 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.45 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.45 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.44 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.4 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 98.4 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.37 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.34 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.32 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.3 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.22 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.21 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.15 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 98.11 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 98.09 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 98.02 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.97 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 97.96 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.9 | |
| PHA02239 | 235 | putative protein phosphatase | 97.89 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.87 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 97.85 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.78 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.74 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.73 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.71 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.7 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.68 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.64 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.58 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.56 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.56 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.52 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.51 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.48 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 97.45 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.4 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.39 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.36 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 97.3 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 97.29 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 97.27 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 97.15 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 97.11 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 97.08 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 97.07 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 97.02 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.86 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 96.8 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 96.48 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 96.43 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 96.4 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 96.17 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 96.08 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 96.07 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 96.01 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 95.94 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 95.85 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 95.82 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 95.8 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 95.66 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 95.63 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 94.74 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 94.7 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 94.6 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 93.82 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 92.98 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 92.26 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 91.84 | |
| PF08139 | 25 | LPAM_1: Prokaryotic membrane lipoprotein lipid att | 86.6 | |
| PHA03376 | 221 | BARF1; Provisional | 84.73 | |
| KOG0372 | 303 | consensus Serine/threonine specific protein phosph | 84.52 | |
| PF07353 | 184 | Uroplakin_II: Uroplakin II; InterPro: IPR009952 Th | 83.25 | |
| PTZ00235 | 291 | DNA polymerase epsilon subunit B; Provisional | 82.05 | |
| KOG0371 | 319 | consensus Serine/threonine protein phosphatase 2A, | 81.73 | |
| KOG0374 | 331 | consensus Serine/threonine specific protein phosph | 81.57 |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-66 Score=483.77 Aligned_cols=331 Identities=58% Similarity=1.068 Sum_probs=279.7
Q ss_pred cchhhHHHHHHHHhcCCCCccccCCCCCCccc-cCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCC
Q 019979 2 ELKFVLTAFVFISATVTTAEYIRPQPRRTLEF-PWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGY 80 (333)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~ 80 (333)
..-|.++.++++.+...+++|+|+.+...+.. +.+..+...|+||||++++.++|+|+|.|.+. ..+.|+||++++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~qvhls~~~~~~m~V~W~T~~~-~~~~V~yG~~~~~l 80 (427)
T PLN02533 2 VKVLGLVAILLIVLAGNVLSYDRPGTRKNLVIHPDNEDDPTHPDQVHISLVGPDKMRISWITQDS-IPPSVVYGTVSGKY 80 (427)
T ss_pred hhhHHHHHHHHhhhccCcccccCCCccccccccccCCCCCCCCceEEEEEcCCCeEEEEEECCCC-CCCEEEEecCCCCC
Confidence 33344444444444455689999998886654 33457888999999999999999999999964 56899999999888
Q ss_pred CeeEEeeEEEEeee-eeecCeEEEEEeCCCCCCCEEEEEeCc--CCCeeEEECCCCCCCeeEEEEeecCCCCChhhHHHH
Q 019979 81 NCGAEGESTSYRYL-FYRSGKIHHTVIGPLEHDTVYFYRCGR--QGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDH 157 (333)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~L~p~t~Y~Y~v~~--~s~~~~F~t~p~~~~~~f~~~gD~~~~~~~~~~~~~ 157 (333)
+.++.|.+.+|++. ...++++|+|+|+||+|||+|+|||+. +++.++|+|+|...+++|+++||+|...+...+++.
T Consensus 81 ~~~a~g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~~~~~~f~v~GDlG~~~~~~~tl~~ 160 (427)
T PLN02533 81 EGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSKFPIKFAVSGDLGTSEWTKSTLEH 160 (427)
T ss_pred cceEEEEEEEEeccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCCCCCeEEEEEEeCCCCcccHHHHHH
Confidence 88888887777642 245789999999999999999999995 468899999998889999999999987777788999
Q ss_pred hhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCc-cccccccccccccCcCCCCCCCC
Q 019979 158 IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARWKMPFEESGSNSN 236 (333)
Q Consensus 158 i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~ 236 (333)
+.+.+|||||++||++|++..+..|+.|.+.++++.+.+|+|+++||||....+.. ...+..|.++|.+|.++.+...+
T Consensus 161 i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~ 240 (427)
T PLN02533 161 VSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSN 240 (427)
T ss_pred HHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhcccCCccccCCCCC
Confidence 98899999999999999888788999999999999888999999999999643321 24577888999999876666678
Q ss_pred ceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCC--ChhHHHHHHHHHHh
Q 019979 237 LYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE--GDGMMAIMEPLLYA 314 (333)
Q Consensus 237 ~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~ 314 (333)
.||+|++|++|||+||++.++....+|++||+++|++.++++.+|+|+++|+|+|++...+.+. ...+++.|+++|++
T Consensus 241 ~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~ 320 (427)
T PLN02533 241 LYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYK 320 (427)
T ss_pred ceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHH
Confidence 9999999999999999998887789999999999999877678999999999999876544333 23467899999999
Q ss_pred CCCcEEEecCccccccccC
Q 019979 315 ASVDLVLAGHVHAYERSVR 333 (333)
Q Consensus 315 ~~v~lvl~GH~H~y~R~~~ 333 (333)
++||++|+||+|.|||++|
T Consensus 321 ~~VdlvlsGH~H~YeR~~p 339 (427)
T PLN02533 321 ARVDLVFAGHVHAYERFDR 339 (427)
T ss_pred hCCcEEEecceeccccccc
Confidence 9999999999999999875
|
|
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-60 Score=431.40 Aligned_cols=293 Identities=43% Similarity=0.688 Sum_probs=249.5
Q ss_pred CCCCCCceEEEEecC-CCcEEEEEEcCCCCCCcEEEEeccCCCCC-----eeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 38 KPSSHPQQVHISLAG-DSHMRVTWITDDESSPSVVEYGTSPGGYN-----CGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~-~~~~~v~W~t~~~~~~~~v~y~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
.....|+||||++++ .++|+|+|.|.+. ....|+|+...+... ..+.+.+..|.......+++|+|+|++|+|
T Consensus 40 ~~~~~peQvhlS~~~~~~~m~VswvT~~~-~~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~ 118 (452)
T KOG1378|consen 40 SVVNSPEQVHLSFTDNLNEMRVSWVTGDG-EENVVRYGEVKDKLDNSAARGMTEAWTDGYANGWRDSGYIHDAVMKNLEP 118 (452)
T ss_pred ccCCCCCeEEEeccCCCCcEEEEEeCCCC-CCceEEEeecCCCccccccccceEEEecccccccceeeeEeeeeecCCCC
Confidence 455679999999998 5599999999964 347899998765422 223333333444446789999999999999
Q ss_pred CCEEEEEeCcC---CCeeEEECCCC-CCCeeEEEEeecCCCCChhhHHHHhhcC-CCCeEEccccccccccch-hhHHHH
Q 019979 112 DTVYFYRCGRQ---GPEFEFKTPPA-QFPITFAVAGDLGQTGWTKSTLDHIGQC-KYDVHLLPGDLSYADYMQ-HRWDTF 185 (333)
Q Consensus 112 ~t~Y~Y~v~~~---s~~~~F~t~p~-~~~~~f~~~gD~~~~~~~~~~~~~i~~~-~~d~vl~~GDl~~~~~~~-~~~~~~ 185 (333)
+|+|+|+||+. |+.|+|+|+|. ..+.+|+++||++.......++....+. ++|+|||+|||+|+++.. ..||.|
T Consensus 119 ~t~YyY~~Gs~~~wS~~f~F~t~p~~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f 198 (452)
T KOG1378|consen 119 NTRYYYQVGSDLKWSEIFSFKTPPGQDSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEF 198 (452)
T ss_pred CceEEEEeCCCCCcccceEeECCCCccCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCCCccchHHH
Confidence 99999999974 68999999995 5899999999999887766666666544 599999999999999887 699999
Q ss_pred HHhhhhhhcCCceEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC--CCCHHH
Q 019979 186 GELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY--DEYSDQ 263 (333)
Q Consensus 186 ~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~--~~~~~q 263 (333)
.++++++++.+|+|++.||||....+. ..|..|..+|.||.++.++..+.||||++|++|||+|+|+.++ ....+|
T Consensus 199 ~r~vEp~As~vPymv~~GNHE~d~~~~--~~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~Q 276 (452)
T KOG1378|consen 199 GRQVEPIASYVPYMVCSGNHEIDWPPQ--PCFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQ 276 (452)
T ss_pred HhhhhhhhccCceEEecccccccCCCc--ccccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchH
Confidence 999999999999999999999976554 3689999999999988887778999999999999999998875 346899
Q ss_pred HHHHHHHhhcccCCCCCeEEEEeccccccCCCC-CCCCCh--hHHHHHHHHHHhCCCcEEEecCccccccccC
Q 019979 264 YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA-HQGEGD--GMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333 (333)
Q Consensus 264 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~-~~~~~~--~~~~~l~~l~~~~~v~lvl~GH~H~y~R~~~ 333 (333)
.+||+++|+++++++.||+|++.|.|+|++... +..++. .++..|+++|.+++||++|.||.|+|||++|
T Consensus 277 Y~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~p 349 (452)
T KOG1378|consen 277 YQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCP 349 (452)
T ss_pred HHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccch
Confidence 999999999998855899999999999998874 444444 6788999999999999999999999999987
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=272.99 Aligned_cols=199 Identities=48% Similarity=0.812 Sum_probs=155.4
Q ss_pred CCCeeEEEEeecCCC-CChhhHHHHhhc--CCCCeEEccccccccccch--hhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 134 QFPITFAVAGDLGQT-GWTKSTLDHIGQ--CKYDVHLLPGDLSYADYMQ--HRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~-~~~~~~~~~i~~--~~~d~vl~~GDl~~~~~~~--~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
..++||+++||+|.. ....++++.+.+ .+|||||++||++|+.+.. .+|+.|++.++++...+|+++++||||..
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 81 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPYMVTPGNHEAD 81 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCcEEcCcccccc
Confidence 468999999999863 445778888865 7999999999999877654 78999999999998889999999999996
Q ss_pred CCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC---CCCHHHHHHHHHHhhcccCCCCCeEEEE
Q 019979 209 SIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY---DEYSDQYRWLKDDLSKVDRKKTPWLLVL 285 (333)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~---~~~~~q~~WL~~~L~~~~~~~~~~~iv~ 285 (333)
..... .....+..++.++........+.||+|++|+++||+||++... ....+|++||+++|+++++++.+|+|++
T Consensus 82 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~ 160 (294)
T cd00839 82 YNFSF-YKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVM 160 (294)
T ss_pred cCCCC-cccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCeEEEE
Confidence 43221 0011111112233323333457899999999999999998654 4578999999999999866567899999
Q ss_pred eccccccCCCCCCC--CChhHHHHHHHHHHhCCCcEEEecCccccccccC
Q 019979 286 LHVPWYNSNEAHQG--EGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333 (333)
Q Consensus 286 ~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R~~~ 333 (333)
+|+|+++....... .....++.|.++|++++|+++|+||.|.|+|++|
T Consensus 161 ~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p 210 (294)
T cd00839 161 GHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCP 210 (294)
T ss_pred eccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeech
Confidence 99999986553322 2345788999999999999999999999999875
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=219.88 Aligned_cols=183 Identities=26% Similarity=0.419 Sum_probs=128.9
Q ss_pred eeEEEEeecCCC-CCh-hhHH----HHhhcCCCCeEEccccccccccch----hhH-HHHHHhhhhhhcCCceEEccCCC
Q 019979 137 ITFAVAGDLGQT-GWT-KSTL----DHIGQCKYDVHLLPGDLSYADYMQ----HRW-DTFGELVQPLASARPWMVTQGNH 205 (333)
Q Consensus 137 ~~f~~~gD~~~~-~~~-~~~~----~~i~~~~~d~vl~~GDl~~~~~~~----~~~-~~~~~~~~~l~~~~P~~~~~GNH 205 (333)
++|+++||++.. ... .++. +.+.+.+|||||++||++|.++.. ..| +.+.+.+..+...+|+++++|||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 80 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNH 80 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCc
Confidence 489999999975 222 2222 223357999999999999876531 233 33445555444569999999999
Q ss_pred CCCCCCCccccccc--cccccccCcCCCCCCCCceEEEEeC------CEEEEEEeccCCC---------------CCCHH
Q 019979 206 EKESIPLIMDAFQS--YNARWKMPFEESGSNSNLYYSFDVA------GAHLIMLGSYADY---------------DEYSD 262 (333)
Q Consensus 206 D~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~ys~~~g------~v~fi~lds~~~~---------------~~~~~ 262 (333)
|..........+.. +..+|.+| ..||+|+++ +++||+|||.... ....+
T Consensus 81 D~~~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~~~ 152 (277)
T cd07378 81 DYSGNVSAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEE 152 (277)
T ss_pred ccCCCchheeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhhHHH
Confidence 99643211111111 12223333 578999998 7999999996421 12589
Q ss_pred HHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccccccc
Q 019979 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSV 332 (333)
Q Consensus 263 q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R~~ 332 (333)
|++||++.|+++. .+|+||++|+|+++..... .....++.|.+++++++|+++|+||.|.+++..
T Consensus 153 Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~ 217 (277)
T cd07378 153 QLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIK 217 (277)
T ss_pred HHHHHHHHHHhcC---CCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeee
Confidence 9999999999874 3799999999998754322 224567899999999999999999999998864
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=215.15 Aligned_cols=187 Identities=21% Similarity=0.335 Sum_probs=135.2
Q ss_pred CCCeeEEEEeecCCCCC-----------------hhhHHHHhhcC--CCCeEEccccccccccch----hhHHHHHHhhh
Q 019979 134 QFPITFAVAGDLGQTGW-----------------TKSTLDHIGQC--KYDVHLLPGDLSYADYMQ----HRWDTFGELVQ 190 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-----------------~~~~~~~i~~~--~~d~vl~~GDl~~~~~~~----~~~~~~~~~~~ 190 (333)
+++++|+++||+|.+.. .+.+++.+.+. +||+||++||+++.+... .+|+.+.+.++
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 46899999999998621 12345555554 999999999999865542 34566666666
Q ss_pred hhhcCCceEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC------CCCHHHH
Q 019979 191 PLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY------DEYSDQY 264 (333)
Q Consensus 191 ~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~------~~~~~q~ 264 (333)
.+...+|+++++||||....+. ......|...| ++.+|+|++|+++||+||+.... ....+|+
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~-~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~ql 150 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT-EESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQD 150 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC-hhHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHHHH
Confidence 6655699999999999954322 11222232222 24689999999999999995422 1247999
Q ss_pred HHHHHHhhcccCCCCCeEEEEeccccccCCCCCC----CCChhHHHHHHHHHHhCCCcEEEecCccccccc
Q 019979 265 RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ----GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERS 331 (333)
Q Consensus 265 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~----~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R~ 331 (333)
+||+++|+++++++.+++||++|+|++....... ......+++|.++|++++|+++||||.|.+.+.
T Consensus 151 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~ 221 (262)
T cd07395 151 VWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGG 221 (262)
T ss_pred HHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCce
Confidence 9999999998643556899999999985433211 112346789999999999999999999988753
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=218.25 Aligned_cols=187 Identities=18% Similarity=0.279 Sum_probs=133.4
Q ss_pred CCCeeEEEEeecCCCCChhhHHHH-h----hcCCCCeEEccccccccccc----hhhHHH-HHHhhhhhh--cCCceEEc
Q 019979 134 QFPITFAVAGDLGQTGWTKSTLDH-I----GQCKYDVHLLPGDLSYADYM----QHRWDT-FGELVQPLA--SARPWMVT 201 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~~~~~~~-i----~~~~~d~vl~~GDl~~~~~~----~~~~~~-~~~~~~~l~--~~~P~~~~ 201 (333)
...++|+++||+|.+...+..+++ | ++.++||||.+||+.+ ++. +..|+. |.+...... ..+||+++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~-~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~v 102 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFP-GGVDGLNDPKWKHCFENVYSEESGDMQIPFFTV 102 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCcccc-CCCCCccchhHHhhHhhhccCcchhhCCCeEEe
Confidence 788999999999976555544432 3 3779999999999984 433 455655 333333322 34899999
Q ss_pred cCCCCCCCCCCcccc-cc------------------ccccccccCcCCCCCCCCceEEE----Ee-------------CC
Q 019979 202 QGNHEKESIPLIMDA-FQ------------------SYNARWKMPFEESGSNSNLYYSF----DV-------------AG 245 (333)
Q Consensus 202 ~GNHD~~~~~~~~~~-~~------------------~~~~~~~~p~~~~~~~~~~~ys~----~~-------------g~ 245 (333)
+||||+.++...+-. +. ....+|.||. .||.+ .. ..
T Consensus 103 LGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f~~~~~~~~~~~~~~~~~ 174 (394)
T PTZ00422 103 LGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHFTDTSGPSLLKSGHKDMS 174 (394)
T ss_pred CCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeeeecccccccccccCCCCE
Confidence 999999654432111 10 1135777774 67754 21 12
Q ss_pred EEEEEEeccCC-----CC-CCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcE
Q 019979 246 AHLIMLGSYAD-----YD-EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDL 319 (333)
Q Consensus 246 v~fi~lds~~~-----~~-~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~l 319 (333)
+.||++||..- +. ....|++||+++|+.+. +.++|+||++|||+|+++.. +....++..|+|+|++|+||+
T Consensus 175 v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~-k~a~WkIVvGHhPIySsG~h--g~~~~L~~~L~PLL~ky~Vdl 251 (394)
T PTZ00422 175 VAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAP-KIADYIIVVGDKPIYSSGSS--KGDSYLSYYLLPLLKDAQVDL 251 (394)
T ss_pred EEEEEEECchhcccCCccccCHHHHHHHHHHHHhhc-cCCCeEEEEecCceeecCCC--CCCHHHHHHHHHHHHHcCcCE
Confidence 89999999521 11 24789999999997654 36789999999999988653 333457889999999999999
Q ss_pred EEecCcccccccc
Q 019979 320 VLAGHVHAYERSV 332 (333)
Q Consensus 320 vl~GH~H~y~R~~ 332 (333)
+|+||+|+|||..
T Consensus 252 YisGHDH~lq~i~ 264 (394)
T PTZ00422 252 YISGYDRNMEVLT 264 (394)
T ss_pred EEEccccceEEec
Confidence 9999999999864
|
|
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.4e-25 Score=195.77 Aligned_cols=180 Identities=18% Similarity=0.226 Sum_probs=125.0
Q ss_pred eeEEEEeecCCCCC--------------hhhHHHHhhcCCCCeEEccccccccccc--hhhHHHHHHhhhhhhcCCceEE
Q 019979 137 ITFAVAGDLGQTGW--------------TKSTLDHIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASARPWMV 200 (333)
Q Consensus 137 ~~f~~~gD~~~~~~--------------~~~~~~~i~~~~~d~vl~~GDl~~~~~~--~~~~~~~~~~~~~l~~~~P~~~ 200 (333)
|||+++||+|.... ..++++.+++.+||+||++||+++.+.. ...|+.+.+.+..+. +|+++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~--~p~~~ 78 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLK--GPVHH 78 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcC--CCEEE
Confidence 69999999995431 1345667777789999999999975542 145555555555543 89999
Q ss_pred ccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCC------------------------
Q 019979 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD------------------------ 256 (333)
Q Consensus 201 ~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~------------------------ 256 (333)
++||||...... .. +...+ ....+..||+|+.++++||+||+...
T Consensus 79 v~GNHD~~~~~~--~~---~~~~~------~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (267)
T cd07396 79 VLGNHDLYNPSR--EY---LLLYT------LLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNSNLGLY 147 (267)
T ss_pred ecCccccccccH--hh---hhccc------ccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhchhhhh
Confidence 999999953221 00 00000 11124679999999999999999531
Q ss_pred ----------CCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC-CCcEEEecCc
Q 019979 257 ----------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHV 325 (333)
Q Consensus 257 ----------~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~ 325 (333)
.....+|++||++.|+++.. +..++||++|+|++...... ......++.+.++++++ +|+++|+||+
T Consensus 148 ~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~v~~GH~ 225 (267)
T cd07396 148 LSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKACISGHD 225 (267)
T ss_pred ccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEEEEcCCc
Confidence 01247999999999998753 22458999999987644311 11111357889999996 8999999999
Q ss_pred cccccc
Q 019979 326 HAYERS 331 (333)
Q Consensus 326 H~y~R~ 331 (333)
|.+...
T Consensus 226 H~~~~~ 231 (267)
T cd07396 226 HEGGYA 231 (267)
T ss_pred CCCCcc
Confidence 998643
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-24 Score=202.76 Aligned_cols=228 Identities=21% Similarity=0.305 Sum_probs=124.7
Q ss_pred eecCeEEEEEeCCCCCCCEEEEEeCc-----CCCeeEEECCCC--CCCeeEEEEeecCCCCChhhHHHHhhc-CCCCeEE
Q 019979 96 YRSGKIHHTVIGPLEHDTVYFYRCGR-----QGPEFEFKTPPA--QFPITFAVAGDLGQTGWTKSTLDHIGQ-CKYDVHL 167 (333)
Q Consensus 96 ~~~~~~~~~~l~~L~p~t~Y~Y~v~~-----~s~~~~F~t~p~--~~~~~f~~~gD~~~~~~~~~~~~~i~~-~~~d~vl 167 (333)
....+..++.|+||+|+|+|+||+.. .+..++|+|+|. ...+||+++||.+.......+++.+.+ .+|||+|
T Consensus 58 ~~~d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l 137 (453)
T PF09423_consen 58 AERDFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVL 137 (453)
T ss_dssp GGGTTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT-----EEEEEE----CCC---HHHHHHTT-S--SEEE
T ss_pred cCCCeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCCceEEEEECCCCcccChHHHHHhhhccCCCcEEE
Confidence 35678999999999999999999865 267899999986 357999999999765444678888877 6999999
Q ss_pred ccccccccccc--------------------hh---h----HHHHH--HhhhhhhcCCceEEccCCCCCCCCCCcc----
Q 019979 168 LPGDLSYADYM--------------------QH---R----WDTFG--ELVQPLASARPWMVTQGNHEKESIPLIM---- 214 (333)
Q Consensus 168 ~~GDl~~~~~~--------------------~~---~----~~~~~--~~~~~l~~~~P~~~~~GNHD~~~~~~~~---- 214 (333)
++||.+|.+.. .. . |..+. ..++.+.+.+|+++++.+||+.++....
T Consensus 138 ~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~ 217 (453)
T PF09423_consen 138 HLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAEN 217 (453)
T ss_dssp E-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-ST
T ss_pred EeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCcccc
Confidence 99999998752 00 1 11111 2456666779999999999996443210
Q ss_pred -------------ccccccccccccCcCC---CCCCCCceEEEEeCC-EEEEEEeccCCCC-------------------
Q 019979 215 -------------DAFQSYNARWKMPFEE---SGSNSNLYYSFDVAG-AHLIMLGSYADYD------------------- 258 (333)
Q Consensus 215 -------------~~~~~~~~~~~~p~~~---~~~~~~~~ys~~~g~-v~fi~lds~~~~~------------------- 258 (333)
.....|.+. +|... .+.....|++|.+|+ +.|++||+....+
T Consensus 218 ~~~~~~~~~~~~~~a~~ay~e~--~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~ 295 (453)
T PF09423_consen 218 HQDTSGDFQDRRRAAYQAYFEY--QPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSR 295 (453)
T ss_dssp T---HHHHHHHHHHHHHHHHHH--S---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT-
T ss_pred ccccccchHHHHHHHHHHHHhh--cCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCcc
Confidence 011122221 22211 112346789999999 9999999953211
Q ss_pred --CCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCC------------CCCCChhHHHHHHHHHHhCCCc--EEEe
Q 019979 259 --EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA------------HQGEGDGMMAIMEPLLYAASVD--LVLA 322 (333)
Q Consensus 259 --~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~------------~~~~~~~~~~~l~~l~~~~~v~--lvl~ 322 (333)
.+.+|++||++.|++. .++|+|+..-.|+...... |.+ -...|++|.++|++.++. ++|+
T Consensus 296 ~mLG~~Q~~wL~~~L~~s---~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g-~~~er~~Ll~~l~~~~~~~vV~LS 371 (453)
T PF09423_consen 296 TMLGEEQWDWLEDWLASS---QATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDG-YPAERQRLLDFLRESGIRNVVFLS 371 (453)
T ss_dssp -SS-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGG-SHHHHHHHHHHHHHTT---EEEEE
T ss_pred CcCCHHHHHHHHHHHhcC---CCcEEEEEeCCceecccccccccccccCCCchhh-CHHHHHHHHHHHHhhCCCCEEEEe
Confidence 2689999999999985 4789999988876433221 111 135689999999988664 8999
Q ss_pred cCccccc
Q 019979 323 GHVHAYE 329 (333)
Q Consensus 323 GH~H~y~ 329 (333)
|+.|...
T Consensus 372 GDvH~~~ 378 (453)
T PF09423_consen 372 GDVHASA 378 (453)
T ss_dssp -SSSSEE
T ss_pred cCcchhe
Confidence 9999753
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-24 Score=187.67 Aligned_cols=181 Identities=17% Similarity=0.252 Sum_probs=121.6
Q ss_pred EEEEeecCCCCCh--------hhHHHHhhcCCCCeEEcccccccccc--------chhhHHHHHHhhhhhhc--CCceEE
Q 019979 139 FAVAGDLGQTGWT--------KSTLDHIGQCKYDVHLLPGDLSYADY--------MQHRWDTFGELVQPLAS--ARPWMV 200 (333)
Q Consensus 139 f~~~gD~~~~~~~--------~~~~~~i~~~~~d~vl~~GDl~~~~~--------~~~~~~~~~~~~~~l~~--~~P~~~ 200 (333)
|+.++|+|.+... ..+++.+++.+||+||++||+++... ...+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 7899999986442 12455677889999999999997532 14567777776655432 489999
Q ss_pred ccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEE--EeCCEEEEEEeccCC----------CCCCHHHHHHHH
Q 019979 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSF--DVAGAHLIMLGSYAD----------YDEYSDQYRWLK 268 (333)
Q Consensus 201 ~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~--~~g~v~fi~lds~~~----------~~~~~~q~~WL~ 268 (333)
++||||..+..... ....+..++.... .....+|.+ +.|+++||+||+... .....+|++||+
T Consensus 82 v~GNHD~~~~~~~~-~~~~~~~~y~~~~----~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~wL~ 156 (256)
T cd07401 82 IRGNHDLFNIPSLD-SENNYYRKYSATG----RDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDRLE 156 (256)
T ss_pred eCCCCCcCCCCCcc-chhhHHHHhheec----CCCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHHHHH
Confidence 99999996433211 1111222121100 001223333 358999999999632 123489999999
Q ss_pred HHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccccc
Q 019979 269 DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 269 ~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
+.|++.. +.+++||++|+|+....... . . ....+.++|++++|+++||||.|.+++
T Consensus 157 ~~L~~~~--~~~~~IV~~HhP~~~~~~~~-~--~-~~~~~~~ll~~~~v~~vl~GH~H~~~~ 212 (256)
T cd07401 157 KELEKST--NSNYTIWFGHYPTSTIISPS-A--K-SSSKFKDLLKKYNVTAYLCGHLHPLGG 212 (256)
T ss_pred HHHHhcc--cCCeEEEEEcccchhccCCC-c--c-hhHHHHHHHHhcCCcEEEeCCccCCCc
Confidence 9999864 34579999999986532211 1 1 122399999999999999999999987
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=6e-24 Score=186.79 Aligned_cols=175 Identities=26% Similarity=0.333 Sum_probs=125.0
Q ss_pred eEEEEeecCCCCCh-------------hhHHHHhhcC--CCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEcc
Q 019979 138 TFAVAGDLGQTGWT-------------KSTLDHIGQC--KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQ 202 (333)
Q Consensus 138 ~f~~~gD~~~~~~~-------------~~~~~~i~~~--~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~ 202 (333)
||+++||+|.+... +++++.+++. +||+||++||+++... ..+|+.+.+.++.+ .+|++.++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~~--~~p~~~v~ 77 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-PESYERLRELLAAL--PIPVYLLP 77 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-HHHHHHHHHHHhhc--CCCEEEeC
Confidence 69999999987431 3455666555 9999999999998644 45677777777666 48999999
Q ss_pred CCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC----CCCHHHHHHHHHHhhcccCCC
Q 019979 203 GNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVDRKK 278 (333)
Q Consensus 203 GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~WL~~~L~~~~~~~ 278 (333)
||||... . +.+.|..... ..+..+|+|+.++++||+||+.... ....+|++||++.|++..
T Consensus 78 GNHD~~~------~---~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~~~~--- 142 (240)
T cd07402 78 GNHDDRA------A---MRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAALAEAP--- 142 (240)
T ss_pred CCCCCHH------H---HHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHHHhCC---
Confidence 9999841 1 1112211100 1235688999999999999985432 125789999999999874
Q ss_pred CCeEEEEeccccccCCCCCC-CCChhHHHHHHHHHHhC-CCcEEEecCcccccc
Q 019979 279 TPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYER 330 (333)
Q Consensus 279 ~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~R 330 (333)
.+++|+++|+|++.....+. ......++.+.+++.++ +|+++|+||.|...+
T Consensus 143 ~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~ 196 (240)
T cd07402 143 DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPID 196 (240)
T ss_pred CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHH
Confidence 24589999999876533111 11112368899999999 999999999998654
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.4e-23 Score=177.21 Aligned_cols=148 Identities=20% Similarity=0.251 Sum_probs=111.2
Q ss_pred eeEEEEeecCCCCCh---------hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhh-cCCceEEccCCCC
Q 019979 137 ITFAVAGDLGQTGWT---------KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA-SARPWMVTQGNHE 206 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~---------~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~P~~~~~GNHD 206 (333)
|||++++|+|..... +.+++.+.+.+||+|+++||+++.+....+|+.+.+.++.+. ..+|+++++||||
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 80 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHD 80 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCc
Confidence 689999999975331 224444557789999999999986654678999999998886 5699999999999
Q ss_pred CCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEe
Q 019979 207 KESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLL 286 (333)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~ 286 (333)
. ++.+|+ ....+|++||++.|++.+ .+++|+++
T Consensus 81 ~----------------------------------------~~~ld~----~~~~~ql~WL~~~L~~~~---~~~~iv~~ 113 (214)
T cd07399 81 L----------------------------------------VLALEF----GPRDEVLQWANEVLKKHP---DRPAILTT 113 (214)
T ss_pred c----------------------------------------hhhCCC----CCCHHHHHHHHHHHHHCC---CCCEEEEe
Confidence 3 222332 134899999999999863 23589999
Q ss_pred ccccccCCCCCCCC-----ChhHHHHHHHHHHhC-CCcEEEecCccccccc
Q 019979 287 HVPWYNSNEAHQGE-----GDGMMAIMEPLLYAA-SVDLVLAGHVHAYERS 331 (333)
Q Consensus 287 H~P~~~~~~~~~~~-----~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~R~ 331 (333)
|+|++......... .....+.|.++++++ +|+++|+||.|.+.+.
T Consensus 114 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~ 164 (214)
T cd07399 114 HAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRT 164 (214)
T ss_pred cccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceE
Confidence 99998654322111 123456788999999 7999999999998775
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-23 Score=175.47 Aligned_cols=190 Identities=23% Similarity=0.445 Sum_probs=128.6
Q ss_pred EECCCC-CCCeeEEEEeecCCCC-ChhhHH-HH---h-hcCCCCeEEccccccccccchhhHHH-HHHhhhhh----hcC
Q 019979 128 FKTPPA-QFPITFAVAGDLGQTG-WTKSTL-DH---I-GQCKYDVHLLPGDLSYADYMQHRWDT-FGELVQPL----ASA 195 (333)
Q Consensus 128 F~t~p~-~~~~~f~~~gD~~~~~-~~~~~~-~~---i-~~~~~d~vl~~GDl~~~~~~~~~~~~-~~~~~~~l----~~~ 195 (333)
+.-|+. ++.++|+++||+|... +.+..+ .+ | ++.++||||.+||.+|.++...+.|. |..-.+.+ .-.
T Consensus 34 l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ 113 (336)
T KOG2679|consen 34 LYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ 113 (336)
T ss_pred hcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc
Confidence 444443 6889999999998543 222222 22 2 36899999999999999887554443 22222222 112
Q ss_pred CceEEccCCCCCCCCCCcccc--ccccccccccCcCCCCCCCCceEE----EEe--CCEEEEEEeccCC-------CCC-
Q 019979 196 RPWMVTQGNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYS----FDV--AGAHLIMLGSYAD-------YDE- 259 (333)
Q Consensus 196 ~P~~~~~GNHD~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~ys----~~~--g~v~fi~lds~~~-------~~~- 259 (333)
.|||.+.||||+.++-..+-. +.....+|..|. .+|. .+. -++.++++|+... +..
T Consensus 114 kpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v 185 (336)
T KOG2679|consen 114 KPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGV 185 (336)
T ss_pred cchhhhccCccccCchhhhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheecccccccccccC
Confidence 699999999999765443322 555666776664 1221 111 1344444444221 110
Q ss_pred ------CHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccccc
Q 019979 260 ------YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 260 ------~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
...++.||+..|++. .++|+||++|||+.+.+ +.|....+.++|.|+|++++||++++||+|+.|.
T Consensus 186 ~PR~~~~~~~l~~le~~L~~S---~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQh 257 (336)
T KOG2679|consen 186 LPRVKYLRALLSWLEVALKAS---RAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYINGHDHCLQH 257 (336)
T ss_pred ChHHHHHHHHHHHHHHHHHHh---hcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEecchhhhhh
Confidence 257789999999995 77899999999998754 4566677899999999999999999999999775
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-22 Score=181.90 Aligned_cols=276 Identities=25% Similarity=0.339 Sum_probs=183.9
Q ss_pred CC-ceEEEEecC-CCcEEEEEEcCC-C------CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 42 HP-QQVHISLAG-DSHMRVTWITDD-E------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 42 ~p-~~v~l~~~~-~~~~~v~W~t~~-~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
.| .+.-|+.++ ...-.|.|..-+ . +....+|+++.++..+....++.. ......+.+++.++||+|+
T Consensus 36 rpaF~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~----a~p~~dhtv~v~~~gL~P~ 111 (522)
T COG3540 36 RPAFTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVI----ASPELDHTVHVDLRGLSPD 111 (522)
T ss_pred CCccccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCcc----CCcccCceEEEeccCCCCC
Confidence 45 555566666 334445565442 1 334567777776533322222211 1134578999999999999
Q ss_pred CEEEEEeCcC---CCeeEEECCCC-CCCeeEEEEeecCCCCCh---hhHHHHhhcCCCCeEEccccccccccchhh----
Q 019979 113 TVYFYRCGRQ---GPEFEFKTPPA-QFPITFAVAGDLGQTGWT---KSTLDHIGQCKYDVHLLPGDLSYADYMQHR---- 181 (333)
Q Consensus 113 t~Y~Y~v~~~---s~~~~F~t~p~-~~~~~f~~~gD~~~~~~~---~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~---- 181 (333)
+.|+||+... +..++|||+|+ ...++++.++|..+..+. -.+.+.|.+.+|||+||.||.+|+.+....
T Consensus 112 ~~yfYRf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~ 191 (522)
T COG3540 112 QDYFYRFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSL 191 (522)
T ss_pred ceEEEEEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCccccccc
Confidence 9999998653 67899999997 567888888887655443 467788889999999999999998664211
Q ss_pred --H----------------HHHH---------HhhhhhhcCCceEEccCCCCCCCCCCcc----c--------------c
Q 019979 182 --W----------------DTFG---------ELVQPLASARPWMVTQGNHEKESIPLIM----D--------------A 216 (333)
Q Consensus 182 --~----------------~~~~---------~~~~~l~~~~P~~~~~GNHD~~~~~~~~----~--------------~ 216 (333)
| +.+. ..++...+..|+++.+.+||..++-... + .
T Consensus 192 ~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A 271 (522)
T COG3540 192 NSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAA 271 (522)
T ss_pred ccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHH
Confidence 1 1121 2445556679999999999996542210 0 1
Q ss_pred ccccccccccCcCCC--CCCCCceEEEEeCC-EEEEEEeccCCC------C----------------CCHHHHHHHHHHh
Q 019979 217 FQSYNARWKMPFEES--GSNSNLYYSFDVAG-AHLIMLGSYADY------D----------------EYSDQYRWLKDDL 271 (333)
Q Consensus 217 ~~~~~~~~~~p~~~~--~~~~~~~ys~~~g~-v~fi~lds~~~~------~----------------~~~~q~~WL~~~L 271 (333)
.+.|.+. ||-... ......|-+|.||+ +.|.+||+.... + .+..|.+||+..|
T Consensus 272 ~qAyyE~--mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L 349 (522)
T COG3540 272 RQAYYEH--MPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGL 349 (522)
T ss_pred HHHHHHh--CccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhh
Confidence 1233332 443211 11347889999998 689999985322 1 2689999999999
Q ss_pred hcccCCCCCeEEEEecccccc----CC---C-------CCCCCChhHHHHHHHHHHhCCCc--EEEecCccc
Q 019979 272 SKVDRKKTPWLLVLLHVPWYN----SN---E-------AHQGEGDGMMAIMEPLLYAASVD--LVLAGHVHA 327 (333)
Q Consensus 272 ~~~~~~~~~~~iv~~H~P~~~----~~---~-------~~~~~~~~~~~~l~~l~~~~~v~--lvl~GH~H~ 327 (333)
.+. ++.|+|+..-.|+-. .. . .+.|. ...|++|+.+++..++. ++|+|.+|.
T Consensus 350 ~~S---katWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy-~~~RerLl~fi~~~~~~N~V~LtgDvH~ 417 (522)
T COG3540 350 GAS---KATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGY-PAGRERLLRFIADRKIRNTVVLTGDVHY 417 (522)
T ss_pred hhc---chhhhhhhhhcceeEeecCCCccccCccccccCcCCC-cccHHHHHHHHHhcCCCCcEEEechhHH
Confidence 984 788999998888621 11 0 11111 24688999999988665 999999996
|
|
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-22 Score=180.11 Aligned_cols=182 Identities=21% Similarity=0.222 Sum_probs=119.1
Q ss_pred EECCCC-CCCeeEEEEeecCCCCC-------------hhhHHHHhhc--CCCCeEEccccccccccchhhHHHHHHhhhh
Q 019979 128 FKTPPA-QFPITFAVAGDLGQTGW-------------TKSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQP 191 (333)
Q Consensus 128 F~t~p~-~~~~~f~~~gD~~~~~~-------------~~~~~~~i~~--~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~ 191 (333)
.+|.++ ..+++|++++|+|.... .+++++.+++ .+|||||++||+++.+. .+.++.+.+.++.
T Consensus 5 ~~~~~~~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~-~~~~~~~~~~l~~ 83 (275)
T PRK11148 5 LTLPLAGEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS-SEAYQHFAEGIAP 83 (275)
T ss_pred cccccCCCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC-HHHHHHHHHHHhh
Confidence 556554 67899999999996321 1345566543 47999999999998543 4566666666666
Q ss_pred hhcCCceEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC----CCCHHHHHHH
Q 019979 192 LASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWL 267 (333)
Q Consensus 192 l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~WL 267 (333)
+. +|++.++||||... .+..+.....+ ...++.+..++++||+||+.... ..+.+|++||
T Consensus 84 l~--~Pv~~v~GNHD~~~------~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~~~G~l~~~ql~wL 147 (275)
T PRK11148 84 LR--KPCVWLPGNHDFQP------AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGVPHGELSEYQLEWL 147 (275)
T ss_pred cC--CcEEEeCCCCCChH------HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCCcCCEeCHHHHHHH
Confidence 53 89999999999841 11111111011 12233344557999999995321 1358999999
Q ss_pred HHHhhcccCCCCCeEEEEeccccccCCCCCCC-CChhHHHHHHHHHHhC-CCcEEEecCccccc
Q 019979 268 KDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG-EGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (333)
Q Consensus 268 ~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~ 329 (333)
++.|++.+. +..||++|||+......+.. ......+++.++++++ +|+++|+||+|...
T Consensus 148 ~~~L~~~~~---~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~ 208 (275)
T PRK11148 148 ERKLADAPE---RHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQEL 208 (275)
T ss_pred HHHHhhCCC---CCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHH
Confidence 999998743 23566666655433322211 1112357899999998 89999999999754
|
|
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-21 Score=172.95 Aligned_cols=186 Identities=22% Similarity=0.300 Sum_probs=123.1
Q ss_pred EEEeecCCCCC---hhhHHHHhhcC--CCCeEEccccccccccchh--------hHHHHHHhhhhhhcCCceEEccCCCC
Q 019979 140 AVAGDLGQTGW---TKSTLDHIGQC--KYDVHLLPGDLSYADYMQH--------RWDTFGELVQPLASARPWMVTQGNHE 206 (333)
Q Consensus 140 ~~~gD~~~~~~---~~~~~~~i~~~--~~d~vl~~GDl~~~~~~~~--------~~~~~~~~~~~l~~~~P~~~~~GNHD 206 (333)
.-+|+.++... .+.+++.+++. +|||||++||+++.+.... .+..+.+.++.....+|+++++||||
T Consensus 41 ~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD 120 (296)
T cd00842 41 GPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHD 120 (296)
T ss_pred CCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCC
Confidence 44666665432 24566677655 9999999999997655321 13445555666666799999999999
Q ss_pred CCCCCCcc------ccccccccccc--cCcCCC-CCCCCceEEEE-eCCEEEEEEeccCCC-----------CCCHHHHH
Q 019979 207 KESIPLIM------DAFQSYNARWK--MPFEES-GSNSNLYYSFD-VAGAHLIMLGSYADY-----------DEYSDQYR 265 (333)
Q Consensus 207 ~~~~~~~~------~~~~~~~~~~~--~p~~~~-~~~~~~~ys~~-~g~v~fi~lds~~~~-----------~~~~~q~~ 265 (333)
........ ..+..+.+.|. ++.... ....+.||++. .++++||+|||.... ....+|++
T Consensus 121 ~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~ 200 (296)
T cd00842 121 SYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQ 200 (296)
T ss_pred CCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHH
Confidence 96432211 11112222221 222111 11246889998 889999999995321 12478999
Q ss_pred HHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCC--CcEEEecCccccc
Q 019979 266 WLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS--VDLVLAGHVHAYE 329 (333)
Q Consensus 266 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--v~lvl~GH~H~y~ 329 (333)
||+++|+++++.+ ..++|++|+|+....... .....+++.+++++|+ |.++|+||+|..+
T Consensus 201 WL~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~ 262 (296)
T cd00842 201 WLEDELQEAEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDE 262 (296)
T ss_pred HHHHHHHHHHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccce
Confidence 9999999986433 348899999987543221 1245688999999996 7789999999854
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.8e-19 Score=156.71 Aligned_cols=165 Identities=21% Similarity=0.285 Sum_probs=106.2
Q ss_pred hHHHHhh-cCCCCeEEccccccccccc--hhhHHH----HHHhhhhhhcCCceEEccCCCCCCCCCCc-ccccccccccc
Q 019979 153 STLDHIG-QCKYDVHLLPGDLSYADYM--QHRWDT----FGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARW 224 (333)
Q Consensus 153 ~~~~~i~-~~~~d~vl~~GDl~~~~~~--~~~~~~----~~~~~~~l~~~~P~~~~~GNHD~~~~~~~-~~~~~~~~~~~ 224 (333)
+.++.+. ..+||+||++||+++.+.. ..+|.. |.+.+..+...+|++.++||||++..... ......|.+.|
T Consensus 35 ~~~~~~~~~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~~F 114 (257)
T cd08163 35 RNWRYMQKQLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLPVRQRFEKYF 114 (257)
T ss_pred HHHHHHHHhcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCHHHHHHHHHHh
Confidence 3444443 5689999999999986542 344543 33333333224799999999998532211 11223444444
Q ss_pred ccCcCCCCCCCCceEEEEeCCEEEEEEeccCC-----CCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCC
Q 019979 225 KMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD-----YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG 299 (333)
Q Consensus 225 ~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~-----~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~ 299 (333)
. ..+|++++|+++||+||+... .....+|.+||++.|+.... ..+ +||++|+|+|......++
T Consensus 115 g----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~p-~ILl~H~Plyr~~~~~cg 182 (257)
T cd08163 115 G----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK-SKP-RILLTHVPLYRPPNTSCG 182 (257)
T ss_pred C----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC-CCc-EEEEeccccccCCCCCCC
Confidence 2 346899999999999999532 12346799999999887543 333 899999999865432111
Q ss_pred ---C---------Chh----H-HHHHHHHHHhCCCcEEEecCccccc
Q 019979 300 ---E---------GDG----M-MAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 300 ---~---------~~~----~-~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
+ +.+ + .+.-..+|++.++.+||+||+|-|=
T Consensus 183 ~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C 229 (257)
T cd08163 183 PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYC 229 (257)
T ss_pred CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccc
Confidence 0 000 1 1334467778899999999999874
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.81 E-value=4e-20 Score=152.93 Aligned_cols=188 Identities=22% Similarity=0.180 Sum_probs=101.9
Q ss_pred eeEEEEeecCCCCChh-----hHHHHhhcCCCCeEEccccccccccchhhHHHHH-HhhhhhhcCCceEEccCCCCCCCC
Q 019979 137 ITFAVAGDLGQTGWTK-----STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFG-ELVQPLASARPWMVTQGNHEKESI 210 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~~-----~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~-~~~~~l~~~~P~~~~~GNHD~~~~ 210 (333)
+||+++||+|...... .........++|+||++||+++.+.....+.... ..........|+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 6999999999875432 2333445889999999999998776544443322 123334556999999999999532
Q ss_pred CCcccccccccccc-ccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCC---HHHHHHHHHHhhcccCCCCCeEEEEe
Q 019979 211 PLIMDAFQSYNARW-KMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEY---SDQYRWLKDDLSKVDRKKTPWLLVLL 286 (333)
Q Consensus 211 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~---~~q~~WL~~~L~~~~~~~~~~~iv~~ 286 (333)
... .......... ...........+........................ ..++.|+...++. ...+++|+++
T Consensus 81 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~iv~~ 156 (200)
T PF00149_consen 81 NSF-YGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEA---KNDDPVIVFT 156 (200)
T ss_dssp HHH-HHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHE---EEESEEEEEE
T ss_pred ccc-cccccccccccccccccccccCcceeeecccccccccccccccccccccchhccccccccccc---ccccceeEEE
Confidence 110 0000000000 000000000000001111222222222211111111 2333333333333 2456899999
Q ss_pred ccccccCCCCCCC--CChhHHHHHHHHHHhCCCcEEEecCcccc
Q 019979 287 HVPWYNSNEAHQG--EGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (333)
Q Consensus 287 H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 328 (333)
|+|+++....... .....++.+..++++++|+++|+||+|.|
T Consensus 157 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 157 HHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp SSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9999876543211 11246788999999999999999999987
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-18 Score=145.88 Aligned_cols=149 Identities=21% Similarity=0.258 Sum_probs=99.4
Q ss_pred CCeeEEEEeecCCCCCh------------hhHHH-HhhcCCCCeEEccccccccccchh-hHHHHHHhhhhhhc-CCceE
Q 019979 135 FPITFAVAGDLGQTGWT------------KSTLD-HIGQCKYDVHLLPGDLSYADYMQH-RWDTFGELVQPLAS-ARPWM 199 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~~------------~~~~~-~i~~~~~d~vl~~GDl~~~~~~~~-~~~~~~~~~~~l~~-~~P~~ 199 (333)
..+||++++|+|..... .+.++ .+...+||+||++||+++...... .+..+.+.++.+.. .+|++
T Consensus 1 ~~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 1 GKFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred CceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 36899999999985431 12222 345779999999999998665432 35555666666644 49999
Q ss_pred EccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhccc--CC
Q 019979 200 VTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVD--RK 277 (333)
Q Consensus 200 ~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~--~~ 277 (333)
+++||||.. . ....+|++||++.|++.. +.
T Consensus 81 ~~~GNHD~~-----------------------------------------------g-~l~~~ql~wL~~~l~~~~~~~~ 112 (199)
T cd07383 81 ATFGNHDGY-----------------------------------------------D-WIRPSQIEWFKETSAALKKKYG 112 (199)
T ss_pred EECccCCCC-----------------------------------------------C-CCCHHHHHHHHHHHHHHhhccC
Confidence 999999920 0 124789999999999863 11
Q ss_pred CCCeEEEEeccccccCCCCCC---------CC---ChhHHHHHHHH-HHhCCCcEEEecCccccccc
Q 019979 278 KTPWLLVLLHVPWYNSNEAHQ---------GE---GDGMMAIMEPL-LYAASVDLVLAGHVHAYERS 331 (333)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~---------~~---~~~~~~~l~~l-~~~~~v~lvl~GH~H~y~R~ 331 (333)
...+.++++|+|+......+. .+ .......+..+ .+..+|+++|+||+|.++..
T Consensus 113 ~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~ 179 (199)
T cd07383 113 KPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFC 179 (199)
T ss_pred CCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCccee
Confidence 334699999999865322111 01 00122344444 45669999999999997643
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-17 Score=145.48 Aligned_cols=174 Identities=18% Similarity=0.203 Sum_probs=106.7
Q ss_pred EEEEeecCCCC--------Ch---hhHHHHhhcC------CCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEc
Q 019979 139 FAVAGDLGQTG--------WT---KSTLDHIGQC------KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (333)
Q Consensus 139 f~~~gD~~~~~--------~~---~~~~~~i~~~------~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~ 201 (333)
+.+++|+|... .. ++.++.+.+. +||+||++||+++.... .......+.++.+ ..|++++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~-~~~~~~l~~l~~l--~~~v~~V 77 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKL-EEAKLDLAWIDAL--PGTKVLL 77 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCCh-HHHHHHHHHHHhC--CCCeEEE
Confidence 35789999762 22 3445554433 99999999999964332 2222333333333 2578999
Q ss_pred cCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccC----CC-----------C--CCHHHH
Q 019979 202 QGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA----DY-----------D--EYSDQY 264 (333)
Q Consensus 202 ~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~----~~-----------~--~~~~q~ 264 (333)
+||||+... ....+.+.+ +.. +..-....++.++++.|++++... .+ + ....|+
T Consensus 78 ~GNHD~~~~-----~~~~~~~~l--~~~--~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 148 (232)
T cd07393 78 KGNHDYWWG-----SASKLRKAL--EES--RLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEKIFEREL 148 (232)
T ss_pred eCCccccCC-----CHHHHHHHH--Hhc--CeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHHHHHHHH
Confidence 999998321 111121111 100 000011345667889999987421 11 0 025689
Q ss_pred HHHHHHhhcccCCC-CCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccccccc
Q 019979 265 RWLKDDLSKVDRKK-TPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSV 332 (333)
Q Consensus 265 ~WL~~~L~~~~~~~-~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R~~ 332 (333)
+||++.|+++.... ..++|+++|+|++.... ..+.+.+++++++++++|+||+|.+++..
T Consensus 149 ~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~--------~~~~~~~~~~~~~v~~vl~GH~H~~~~~~ 209 (232)
T cd07393 149 ERLELSLKAAKKREKEKIKIVMLHYPPANENG--------DDSPISKLIEEYGVDICVYGHLHGVGRDR 209 (232)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC--------CHHHHHHHHHHcCCCEEEECCCCCCcccc
Confidence 99999999864322 24699999999875432 12467888999999999999999987643
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.7e-17 Score=138.02 Aligned_cols=167 Identities=13% Similarity=0.130 Sum_probs=103.4
Q ss_pred EEEEeecCCCCChhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCcccccc
Q 019979 139 FAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQ 218 (333)
Q Consensus 139 f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~~ 218 (333)
|+++||+|........ ..+.+.++|+||++||+++.... .....+ +.+..+ ..|+++++||||.... ..
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~~-~~~~~~-~~l~~~--~~p~~~v~GNHD~~~~------~~ 69 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGGK-EAAVEI-NLLLAI--GVPVLAVPGNCDTPEI------LG 69 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCCH-HHHHHH-HHHHhc--CCCEEEEcCCCCCHHH------HH
Confidence 5789999976432222 34567889999999999975542 222222 333322 3899999999997321 11
Q ss_pred ccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCC------CCCCHHHHHHHHHHhhcccCCCCCeEEEEecccccc
Q 019979 219 SYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYN 292 (333)
Q Consensus 219 ~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~------~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 292 (333)
....... ......+.+++++|+++++... .....+|++|+ +.++.. +.+.+|+++|+|++.
T Consensus 70 ~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~---~~~~~ilv~H~pp~~ 136 (188)
T cd07392 70 LLTSAGL---------NLHGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNNL---LAKNLILVTHAPPYG 136 (188)
T ss_pred hhhcCcE---------ecCCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhcc---CCCCeEEEECCCCcC
Confidence 0000000 0111345678999999987421 12346888998 444433 224589999999976
Q ss_pred C-CCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 293 S-NEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 293 ~-~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
. ............+.+.+++++++++++||||.|.-.
T Consensus 137 ~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 137 TAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred CcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 3 211111101234788899999999999999999753
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.3e-17 Score=143.84 Aligned_cols=176 Identities=18% Similarity=0.122 Sum_probs=107.3
Q ss_pred eEEEEeecCCCCCh-------hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCC
Q 019979 138 TFAVAGDLGQTGWT-------KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (333)
Q Consensus 138 ~f~~~gD~~~~~~~-------~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~ 210 (333)
||++++|+|..... +.+++.+.+.++|+||++||++... .+...+.+.+..+ ...|++.++||||+...
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v~GNHD~~~~ 76 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFNAGNHDMLKD 76 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEECCCCCCCCC
Confidence 58999999964211 2355666778899999999999642 1222233333332 34899999999998421
Q ss_pred CCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC--------------------------C-----C
Q 019979 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY--------------------------D-----E 259 (333)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~--------------------------~-----~ 259 (333)
.. +..+.+.+. +. ...+.++.+..++++|++++...++ . .
T Consensus 77 ~~----~~~~~~~~~-~~----~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 147 (239)
T TIGR03729 77 LT----YEEIESNDS-PL----YLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKRPMSDPER 147 (239)
T ss_pred CC----HHHHHhccc-hh----hhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCCCCChHHH
Confidence 11 111111110 00 0112333344467888888842221 0 1
Q ss_pred CHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCC-------CCCCCC-hhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 260 YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE-------AHQGEG-DGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 260 ~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~-------~~~~~~-~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
..+|++||++.|++... +.+|+++|+|+..... .+.... ....+.+.+++++++|+++++||.|.-.
T Consensus 148 ~~~~l~~l~~~l~~~~~---~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 148 TAIVLKQLKKQLNQLDN---KQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHHHHHHHHHhcCC---CCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECCccCCC
Confidence 26788999999988743 2389999998854211 111100 1124789999999999999999999764
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-16 Score=148.47 Aligned_cols=93 Identities=22% Similarity=0.350 Sum_probs=71.3
Q ss_pred CCceEEEE-eCCEEEEEEeccCCC-----CCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCC-----CCChh
Q 019979 235 SNLYYSFD-VAGAHLIMLGSYADY-----DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ-----GEGDG 303 (333)
Q Consensus 235 ~~~~ys~~-~g~v~fi~lds~~~~-----~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-----~~~~~ 303 (333)
+..||+|+ .++++||+||+.... ...++|++||+++|++. +.+++||++|||++.....+. +....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 46799999 899999999996421 23589999999999985 335699999999876543221 11112
Q ss_pred HHHHHHHHHHhC-CCcEEEecCcccccc
Q 019979 304 MMAIMEPLLYAA-SVDLVLAGHVHAYER 330 (333)
Q Consensus 304 ~~~~l~~l~~~~-~v~lvl~GH~H~y~R 330 (333)
..++|.++|+++ +|.++||||.|....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i 394 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKI 394 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCcc
Confidence 347899999998 899999999998653
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=143.62 Aligned_cols=179 Identities=23% Similarity=0.302 Sum_probs=118.4
Q ss_pred eeEEEEeecCCC--CC-h----hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCC
Q 019979 137 ITFAVAGDLGQT--GW-T----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (333)
Q Consensus 137 ~~f~~~gD~~~~--~~-~----~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~ 209 (333)
++|+.++|.|.. .. . .++++.++..+||++|++||+++. +....++...+.++......|++.+|||||...
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIVVPGNHDARV 79 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEeeCCCCcCCc
Confidence 489999999988 22 1 345567778899999999999986 445667777777774445589999999999953
Q ss_pred CCCccccccccccccccCcCCCCCCCCceEEEEe-CCEEEEEEeccCCC----CCCHHHHHHHHHHhhcccCCCCCeEEE
Q 019979 210 IPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDV-AGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVDRKKTPWLLV 284 (333)
Q Consensus 210 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~-g~v~fi~lds~~~~----~~~~~q~~WL~~~L~~~~~~~~~~~iv 284 (333)
.. ...+...+.... ..+-.... ++++++.+|+.... ..+..|++||++.|++........+|+
T Consensus 80 ~~-----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~~~~~~v~ 147 (301)
T COG1409 80 VN-----GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPERAKDTVVV 147 (301)
T ss_pred hH-----HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccccCceEEE
Confidence 21 112222221110 11111112 67899999996432 246899999999999875431123577
Q ss_pred EeccccccCCCCCCCCChhHHHHHHHHHHhCC--CcEEEecCcccc
Q 019979 285 LLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS--VDLVLAGHVHAY 328 (333)
Q Consensus 285 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--v~lvl~GH~H~y 328 (333)
++|+|+.................+..++..++ |+++|+||.|.-
T Consensus 148 ~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 148 LHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred ecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 77777655433322222223466777888887 999999999975
|
|
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.9e-16 Score=131.96 Aligned_cols=174 Identities=13% Similarity=0.080 Sum_probs=104.6
Q ss_pred CCeeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCc
Q 019979 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~ 213 (333)
..-|++++||+|.+.. .+++++.+++.++|+||++||+++.+...+....+.+.+..+. .|+++++||||.. ..
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~--~pv~~V~GNhD~~-v~-- 77 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAH--LPTFYVPGPQDAP-LW-- 77 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC--CceEEEcCCCChH-HH--
Confidence 3468999999996532 2345555556789999999999985432333333344333332 7999999999973 00
Q ss_pred ccccc-ccccccccCcCCCCCCCCceEEEEe-CCEEEEEEeccCCC--CCCHHHH----HHHHH----HhhcccCCCCCe
Q 019979 214 MDAFQ-SYNARWKMPFEESGSNSNLYYSFDV-AGAHLIMLGSYADY--DEYSDQY----RWLKD----DLSKVDRKKTPW 281 (333)
Q Consensus 214 ~~~~~-~~~~~~~~p~~~~~~~~~~~ys~~~-g~v~fi~lds~~~~--~~~~~q~----~WL~~----~L~~~~~~~~~~ 281 (333)
.... .|.+....|... . .... ...+ |+++|+.++....+ ...+++. .||.+ .+.+. ..+.
T Consensus 78 -~~l~~~~~~~~~~p~~~-~-lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~---~~~~ 149 (224)
T cd07388 78 -EYLREAYNAELVHPEIR-N-VHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL---KDYR 149 (224)
T ss_pred -HHHHHHhcccccCccce-e-cCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhC---CCCC
Confidence 0001 111000112100 0 0111 2344 55999999964432 2234542 56433 33332 2235
Q ss_pred EEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcc
Q 019979 282 LLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (333)
Q Consensus 282 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 326 (333)
.|+++|+|++.....+ ...+.+.++++++++.+++|||.|
T Consensus 150 ~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 150 KVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred eEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 8999999999874322 235789999999999999999998
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.1e-15 Score=121.90 Aligned_cols=115 Identities=27% Similarity=0.310 Sum_probs=87.0
Q ss_pred EEEEeecCCCCChh-----------hHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcC-CceEEccCCCC
Q 019979 139 FAVAGDLGQTGWTK-----------STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA-RPWMVTQGNHE 206 (333)
Q Consensus 139 f~~~gD~~~~~~~~-----------~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~-~P~~~~~GNHD 206 (333)
|+.++|+|.+.... .+++.+.+.++|+|+++||+++... ..+|+.+.+.++.+... .|++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~~~~l~~~~~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGL-PEEFEEAREFLDALPAPLEPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCC-HHHHHHHHHHHHHccccCCcEEEeCCCCe
Confidence 57899999865321 1345566889999999999998554 46677777888877654 69999999999
Q ss_pred CCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEe
Q 019979 207 KESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLL 286 (333)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~ 286 (333)
. |+++
T Consensus 80 ~---------------------------------------------------------------------------iv~~ 84 (144)
T cd07400 80 V---------------------------------------------------------------------------IVVL 84 (144)
T ss_pred E---------------------------------------------------------------------------EEEe
Confidence 6 8999
Q ss_pred ccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccccc
Q 019979 287 HVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 287 H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
|+|++.......... ...+.+.+++++++++++++||+|....
T Consensus 85 Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~ 127 (144)
T cd07400 85 HHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYV 127 (144)
T ss_pred cCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCe
Confidence 999876543221111 1457799999999999999999998653
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-15 Score=125.43 Aligned_cols=143 Identities=22% Similarity=0.207 Sum_probs=87.8
Q ss_pred EEEEeecCCCCChhh-HH-HHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCcccc
Q 019979 139 FAVAGDLGQTGWTKS-TL-DHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA 216 (333)
Q Consensus 139 f~~~gD~~~~~~~~~-~~-~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~ 216 (333)
|+++||+|.+..... .+ +.+...++|+++++||+++.... ..+.. .........|+++++||||+.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~-~~~~~---~~~~~~~~~~v~~v~GNHD~~-------- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDA-PRFAP---LLLALKGFEPVIYVPGNHEFY-------- 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcch-HHHHH---HHHhhcCCccEEEeCCCcceE--------
Confidence 578999997653322 22 33457789999999999975432 22221 222333458999999999993
Q ss_pred ccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCC-CHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCC
Q 019979 217 FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDE-YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (333)
Q Consensus 217 ~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~-~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (333)
++|+......++.. ..+..+|+.++++ +.+||++|+|+.....
T Consensus 69 -----------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~-------~~~vv~~HhpP~~~~~ 112 (166)
T cd07404 69 -----------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR-------GKTVVVTHHAPSPLSL 112 (166)
T ss_pred -----------------------------EEEEeeecccccCccchHHHHhCCCCCC-------CCEEEEeCCCCCcccc
Confidence 12222222222221 2344455444433 2389999999976543
Q ss_pred CCC---C-CChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 296 AHQ---G-EGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 296 ~~~---~-~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
.+. + .....++.+.+++++.+|+++++||+|...
T Consensus 113 ~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 113 APQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred CccccCCCcchhhhhccHhHHhhcCCCEEEECCccccc
Confidence 221 1 112345667888889999999999999764
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=5e-15 Score=128.60 Aligned_cols=164 Identities=22% Similarity=0.171 Sum_probs=100.8
Q ss_pred CeeEEEEeecCCCCCh-----hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCC
Q 019979 136 PITFAVAGDLGQTGWT-----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~~-----~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~ 210 (333)
++||++++|+|..... +++++.+.+.+||+|+++||+++...... +.+.+.++.+....|+++++||||+...
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~v~GNHD~~~~ 78 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYAVLGNHDYYSG 78 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEEECCCcccccC
Confidence 4799999999986432 45666777889999999999998654322 3455566666666899999999999543
Q ss_pred CCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEecccc
Q 019979 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPW 290 (333)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~ 290 (333)
.. ..+....+..... ...+....++.++..+..+.... .....+++.+.+++.+ +.++.|++.|.|.
T Consensus 79 ~~--~~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~~~~~~~~--~~~~~I~l~H~P~ 145 (223)
T cd07385 79 DE--ENWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDD----GLGRRPDLEKALKGLD--EDDPNILLAHQPD 145 (223)
T ss_pred ch--HHHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccC----ccccCCCHHHHHhCCC--CCCCEEEEecCCC
Confidence 22 1101111111111 01234455666664444432111 1122345666666543 3346999999985
Q ss_pred ccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccccc
Q 019979 291 YNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERS 331 (333)
Q Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R~ 331 (333)
+. +. +.+.++|++++||+|..+..
T Consensus 146 ~~-------------~~----~~~~~~dl~l~GHtHggqi~ 169 (223)
T cd07385 146 TA-------------EE----AAAWGVDLQLSGHTHGGQIR 169 (223)
T ss_pred hh-------------HH----hcccCccEEEeccCCCCEEe
Confidence 31 11 25679999999999987754
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.61 E-value=2e-14 Score=132.47 Aligned_cols=92 Identities=18% Similarity=0.242 Sum_probs=65.1
Q ss_pred CceEEEE-eCCE--EEEEEeccCC---------C--CCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCC----C
Q 019979 236 NLYYSFD-VAGA--HLIMLGSYAD---------Y--DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA----H 297 (333)
Q Consensus 236 ~~~ys~~-~g~v--~fi~lds~~~---------~--~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~----~ 297 (333)
..||+|+ .|++ ++|+||+... + ....+|++||+++|++... +.+++|+++|+|+...... +
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 4599999 5855 9999998531 1 1358999999999998864 4567888888887652211 1
Q ss_pred C---------CCChhHHHHHHHHHHhC-CCcEEEecCcccc
Q 019979 298 Q---------GEGDGMMAIMEPLLYAA-SVDLVLAGHVHAY 328 (333)
Q Consensus 298 ~---------~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 328 (333)
. ..+.....+|..+|++| +|.++||||.|.-
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 1 00111124899999999 7989999999953
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.6e-15 Score=128.65 Aligned_cols=184 Identities=17% Similarity=0.153 Sum_probs=104.7
Q ss_pred eEEEEeecCCCCCh----------------hhHHHHhhcCCCCeEEccccccccccc-hhhHHHHHHhhhhhh-cCCceE
Q 019979 138 TFAVAGDLGQTGWT----------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLA-SARPWM 199 (333)
Q Consensus 138 ~f~~~gD~~~~~~~----------------~~~~~~i~~~~~d~vl~~GDl~~~~~~-~~~~~~~~~~~~~l~-~~~P~~ 199 (333)
||++++|+|.+... +++++.+.+.+||+||++||+++.... ...+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 68999999976431 334455567899999999999975432 334566667777664 358999
Q ss_pred EccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCC
Q 019979 200 VTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKT 279 (333)
Q Consensus 200 ~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~ 279 (333)
+++||||.............+........ ..-........++.+++.|++++..... ....+.++++..+.+.. +.
T Consensus 81 ~~~GNHD~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~~~--~~ 156 (223)
T cd00840 81 IIAGNHDSPSRLGALSPLLALSGLHLVGV-EEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRPLD--PD 156 (223)
T ss_pred EecCCCCCccccccccchHhhCcEEEEcc-cCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhccC--CC
Confidence 99999999643211000000100000000 0000011222334456888888753221 11333444444544443 33
Q ss_pred CeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 280 PWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 280 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
...|++.|.|+.......... .......+.+.++|++++||.|..+
T Consensus 157 ~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~ 202 (223)
T cd00840 157 DFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQ 202 (223)
T ss_pred CcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCe
Confidence 469999999986543221110 1233444667899999999999865
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-14 Score=129.28 Aligned_cols=163 Identities=20% Similarity=0.174 Sum_probs=97.0
Q ss_pred CCCCeeEEEEeecCCCCC-----hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCC
Q 019979 133 AQFPITFAVAGDLGQTGW-----TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (333)
Q Consensus 133 ~~~~~~f~~~gD~~~~~~-----~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~ 207 (333)
..+++||++++|+|.... ..++++.+++.+||+|+++||+++.+. ...++.+.+.++.+....|+++++||||+
T Consensus 46 ~~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~-~~~~~~~~~~L~~L~~~~pv~~V~GNHD~ 124 (271)
T PRK11340 46 NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDM-PLNFSAFSDVLSPLAECAPTFACFGNHDR 124 (271)
T ss_pred CCCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCc-cccHHHHHHHHHHHhhcCCEEEecCCCCc
Confidence 356799999999998632 234566677889999999999997322 22355666777777766899999999998
Q ss_pred CCCCCccccccccccccccCcCCCCCCCCceEEEEeCC--EEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEE
Q 019979 208 ESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAG--AHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVL 285 (333)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~--v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~ 285 (333)
..............+.-.. .-..+....+..++ +.++++|.... +... ..+.+++ + ..+|++
T Consensus 125 ~~~~~~~~~~~~~l~~~gi-----~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~~----~-~~~IlL 188 (271)
T PRK11340 125 PVGTEKNHLIGETLKSAGI-----TVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASEA----N-LPRLVL 188 (271)
T ss_pred ccCccchHHHHHHHHhcCc-----EEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcCC----C-CCeEEE
Confidence 4221100011111111000 00123444555543 66677763211 1111 1112222 2 248999
Q ss_pred eccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 286 LHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 286 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
.|.|-.- +.+.+.++|++||||+|--|
T Consensus 189 ~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQ 215 (271)
T PRK11340 189 AHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQ 215 (271)
T ss_pred EcCCChh-----------------HhhccCCCCEEEeccccCCe
Confidence 9999431 12456789999999999644
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.6e-13 Score=103.42 Aligned_cols=116 Identities=29% Similarity=0.285 Sum_probs=82.9
Q ss_pred EEEeecCCCCChhhHH---HHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCcccc
Q 019979 140 AVAGDLGQTGWTKSTL---DHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA 216 (333)
Q Consensus 140 ~~~gD~~~~~~~~~~~---~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~ 216 (333)
+++||+|......... ....+.++|+||++||+++..... .+..+...........|+++++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~GNHD---------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDP-EEVLAAALALLLLLGIPVYVVPGNHD---------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCc-hHHHHHHHHHhhcCCCCEEEeCCCce----------
Confidence 4689999875443332 355678999999999999865543 33333222333345599999999999
Q ss_pred ccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCC
Q 019979 217 FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA 296 (333)
Q Consensus 217 ~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~ 296 (333)
|+++|.|++.....
T Consensus 70 ------------------------------------------------------------------i~~~H~~~~~~~~~ 83 (131)
T cd00838 70 ------------------------------------------------------------------ILLTHGPPYDPLDE 83 (131)
T ss_pred ------------------------------------------------------------------EEEeccCCCCCchh
Confidence 89999998765543
Q ss_pred CCCCChhHHHHHHHHHHhCCCcEEEecCcccccccc
Q 019979 297 HQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSV 332 (333)
Q Consensus 297 ~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R~~ 332 (333)
........+..+..++.+.+++++|+||.|.+.++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 84 LSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred hcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 222222246788888999999999999999998764
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=4e-12 Score=111.95 Aligned_cols=199 Identities=21% Similarity=0.285 Sum_probs=110.0
Q ss_pred eeEEECCCCCCCeeEEEEeecCCCCCh--------------------hhHHHH-hhcCCCCeEEccccccccccchhhHH
Q 019979 125 EFEFKTPPAQFPITFAVAGDLGQTGWT--------------------KSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWD 183 (333)
Q Consensus 125 ~~~F~t~p~~~~~~f~~~gD~~~~~~~--------------------~~~~~~-i~~~~~d~vl~~GDl~~~~~~~~~~~ 183 (333)
.++|+. .++|||+.++|+|.+... ...++. ++.++||+|+++||+++.....+.-.
T Consensus 45 ~lr~~~---~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~ 121 (379)
T KOG1432|consen 45 KLRFRE---DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAAT 121 (379)
T ss_pred eeeecC---CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHH
Confidence 344544 678999999999876431 123333 35899999999999998755444445
Q ss_pred HHHHhhhhh-hcCCceEEccCCCCCCCCCCccccccccccccccCcC--CCCCCCCceE-EEEeCC--------------
Q 019979 184 TFGELVQPL-ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE--ESGSNSNLYY-SFDVAG-------------- 245 (333)
Q Consensus 184 ~~~~~~~~l-~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~y-s~~~g~-------------- 245 (333)
.++..+.+. ..++||.++.||||-...-. ......+... +|.. ...+....-| ...+|+
T Consensus 122 sl~kAvaP~I~~~IPwA~~lGNHDdes~lt-r~ql~~~i~~--lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~ 198 (379)
T KOG1432|consen 122 SLMKAVAPAIDRKIPWAAVLGNHDDESDLT-RLQLMKFISK--LPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELE 198 (379)
T ss_pred HHHHHhhhHhhcCCCeEEEecccccccccC-HHHHHHHHhc--CCCccccCCCcccceeeeecccceEEEeccCCCcccc
Confidence 566677776 44599999999999854211 0111111111 1111 0000001111 111121
Q ss_pred ----EEEEEEeccCC---------CC-CCHHHHHHHHHHhhccc---CCCCC-eEEEEeccccc--cCCCC---CCC---
Q 019979 246 ----AHLIMLGSYAD---------YD-EYSDQYRWLKDDLSKVD---RKKTP-WLLVLLHVPWY--NSNEA---HQG--- 299 (333)
Q Consensus 246 ----v~fi~lds~~~---------~~-~~~~q~~WL~~~L~~~~---~~~~~-~~iv~~H~P~~--~~~~~---~~~--- 299 (333)
..+++||+..+ |+ ..+.|.+||+..-.+-+ ..-.| --+++.|.|+- ..-.. ..+
T Consensus 199 ~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~ 278 (379)
T KOG1432|consen 199 NKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQ 278 (379)
T ss_pred cCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceee
Confidence 23455555321 11 24789999998773311 11112 36888999973 21111 000
Q ss_pred C---ChhHHHHHHHHHH-hCCCcEEEecCccccc
Q 019979 300 E---GDGMMAIMEPLLY-AASVDLVLAGHVHAYE 329 (333)
Q Consensus 300 ~---~~~~~~~l~~l~~-~~~v~lvl~GH~H~y~ 329 (333)
+ .......+...|. ..+|+.|++||+|...
T Consensus 279 E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvND 312 (379)
T KOG1432|consen 279 EGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVND 312 (379)
T ss_pred ccccccccccHHHHHHHhccCcceEEeccccccc
Confidence 1 0112345666666 7799999999999753
|
|
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.5e-12 Score=104.01 Aligned_cols=117 Identities=18% Similarity=0.160 Sum_probs=78.3
Q ss_pred eEEEEeecCCCCChhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCccccc
Q 019979 138 TFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAF 217 (333)
Q Consensus 138 ~f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~ 217 (333)
||+++||+|.... .+...++|+++++||+++.+. ..+++.+.+.++.+.. .+++.++||||...
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~-~~~~~~~~~~l~~~~~-~~~~~v~GNHD~~~-------- 64 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGT-LEELQKFLDWLKSLPH-PHKIVIAGNHDLTL-------- 64 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHhCCC-CeEEEEECCCCCcC--------
Confidence 5899999996643 334578999999999987543 2344445555554431 23578999999720
Q ss_pred cccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCC
Q 019979 218 QSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAH 297 (333)
Q Consensus 218 ~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~ 297 (333)
. . .+ ..|+++|.|++......
T Consensus 65 ------------------~-------------------------------------~--~~--~~ilv~H~~p~~~~~~~ 85 (135)
T cd07379 65 ------------------D-------------------------------------P--ED--TDILVTHGPPYGHLDLV 85 (135)
T ss_pred ------------------C-------------------------------------C--CC--CEEEEECCCCCcCcccc
Confidence 0 1 12 37899999987654332
Q ss_pred CCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 298 QGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 298 ~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
........+.+.+++++.+++++++||+|...
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 86 SSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred ccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 21111223667888889999999999999863
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=5e-12 Score=105.66 Aligned_cols=108 Identities=15% Similarity=0.267 Sum_probs=68.6
Q ss_pred HhhcCCCCeEEccccccccccc--hhhHHHHHHhhhhh---hcCCceEEccCCCCCCCCCCccccccccccccccCcCCC
Q 019979 157 HIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPL---ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEES 231 (333)
Q Consensus 157 ~i~~~~~d~vl~~GDl~~~~~~--~~~~~~~~~~~~~l---~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~ 231 (333)
.+...+||+|+++||+++.+.. ..+|....+-+.++ ...+|++.++||||.++.... ....-.++|.
T Consensus 37 a~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~~--~~~~~v~RF~------ 108 (195)
T cd08166 37 ALNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEED--PIESKIRRFE------ 108 (195)
T ss_pred HHhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCCC--cCHHHHHHHH------
Confidence 3456799999999999997664 22343332222222 224899999999999632110 0000111110
Q ss_pred CCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHH
Q 019979 232 GSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPL 311 (333)
Q Consensus 232 ~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l 311 (333)
.+ | |+++|.|+..... ..+..+
T Consensus 109 -----~~------------------------------------------F-i~lsH~P~~~~~~----------~~~~~~ 130 (195)
T cd08166 109 -----KY------------------------------------------F-IMLSHVPLLAEGG----------QALKHV 130 (195)
T ss_pred -----Hh------------------------------------------h-eeeeccccccccc----------HHHHHH
Confidence 00 1 8999999865322 366778
Q ss_pred HHhCCCcEEEecCcccccc
Q 019979 312 LYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 312 ~~~~~v~lvl~GH~H~y~R 330 (333)
+.+++++++|+||.|.+..
T Consensus 131 ~~~~~p~~Ifs~H~H~s~~ 149 (195)
T cd08166 131 VTDLDPDLIFSAHRHKSSI 149 (195)
T ss_pred HHhcCceEEEEcCccceee
Confidence 8999999999999998754
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.7e-11 Score=103.66 Aligned_cols=64 Identities=20% Similarity=0.249 Sum_probs=44.9
Q ss_pred eeEEEEeecCCCCChhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCC
Q 019979 137 ITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~ 209 (333)
+||+++||+|.... ....+.+++.+||+|+++||+++.. ..+.+.+..+ ..|+++++||||...
T Consensus 1 ~rIa~isDiHg~~~-~~~~~~l~~~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~GNHD~~~ 64 (238)
T cd07397 1 LRIAIVGDVHGQWD-LEDIKALHLLQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVILGNHDAWY 64 (238)
T ss_pred CEEEEEecCCCCch-HHHHHHHhccCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEcCCCcccc
Confidence 58999999996533 3334566778999999999998521 1222233332 279999999999854
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.1e-12 Score=111.69 Aligned_cols=75 Identities=16% Similarity=0.108 Sum_probs=60.8
Q ss_pred CCCeeEEEEeecCCCCCh---hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCC
Q 019979 134 QFPITFAVAGDLGQTGWT---KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~---~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~ 209 (333)
..+++++.++|+|..... .+.+..+.+..||+|+++||+++. ......+...+.++++.+..+++++.||||+..
T Consensus 42 ~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~av~GNHd~~~ 119 (284)
T COG1408 42 LQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVFAVLGNHDYGV 119 (284)
T ss_pred cCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEEEEeccccccc
Confidence 578999999999987665 345556667888999999999985 223556777888899988899999999999964
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.3e-11 Score=106.92 Aligned_cols=72 Identities=17% Similarity=0.099 Sum_probs=49.1
Q ss_pred eeEEEEeecCCCCChh----hHHHHhh--cCCCCeEEccccccccc---c-chhhHHHHHHhhhhhhcC-CceEEccCCC
Q 019979 137 ITFAVAGDLGQTGWTK----STLDHIG--QCKYDVHLLPGDLSYAD---Y-MQHRWDTFGELVQPLASA-RPWMVTQGNH 205 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~~----~~~~~i~--~~~~d~vl~~GDl~~~~---~-~~~~~~~~~~~~~~l~~~-~P~~~~~GNH 205 (333)
.+++++||+|.+.... ..++.+. ..+||+|+++||+++.- . .........+.++.+... +|++.++|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 3789999999765432 2334332 46899999999999631 1 112234455666666555 8999999999
Q ss_pred CCC
Q 019979 206 EKE 208 (333)
Q Consensus 206 D~~ 208 (333)
|..
T Consensus 81 D~~ 83 (241)
T PRK05340 81 DFL 83 (241)
T ss_pred chh
Confidence 984
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.9e-11 Score=100.41 Aligned_cols=175 Identities=19% Similarity=0.221 Sum_probs=90.8
Q ss_pred eeEEEEeecCCCC-ChhhHHHHhhcCCCCeEEccccccccccchhhHH--------------------------HHHHhh
Q 019979 137 ITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWD--------------------------TFGELV 189 (333)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~--------------------------~~~~~~ 189 (333)
-++++++|.+..- ...++++.+...+||+|+++||+.-......+|. .|++.+
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 4789999986432 2345666667889999999999986655566666 455555
Q ss_pred hhhhcCCceEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccC-CCC--C------C
Q 019979 190 QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA-DYD--E------Y 260 (333)
Q Consensus 190 ~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~-~~~--~------~ 260 (333)
..+. +|++++|||||........ ..|....-.|.-. . -...+.+--|.+.|+.+..+- +.. . .
T Consensus 86 ~~~~--~p~~~vPG~~Dap~~~~lr---~a~~~e~v~p~~~-~--vH~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrYP 157 (255)
T PF14582_consen 86 GELG--VPVFVVPGNMDAPERFFLR---EAYNAEIVTPHIH-N--VHESFFFWKGEYLVAGMGGEITDDQREEEFKLRYP 157 (255)
T ss_dssp HCC---SEEEEE--TTS-SHHHHHH---HHHHCCCC-TTEE-E---CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EEE
T ss_pred HhcC--CcEEEecCCCCchHHHHHH---HHhccceecccee-e--eeeeecccCCcEEEEecCccccCCCccccccccch
Confidence 5444 9999999999984211100 0111111111100 0 011223333457777776531 110 0 1
Q ss_pred HHHHHHHHHHhhcccCCCCCeEEEEecccc-ccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccc
Q 019979 261 SDQYRWLKDDLSKVDRKKTPWLLVLLHVPW-YNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327 (333)
Q Consensus 261 ~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 327 (333)
....+|..+.|...+ +.+ +|++.|.|+ ...+..+. ..+.+.+++++++.+++||||.|-
T Consensus 158 ~weaey~lk~l~elk--~~r-~IlLfhtpPd~~kg~~h~-----GS~~V~dlIk~~~P~ivl~Ghihe 217 (255)
T PF14582_consen 158 AWEAEYSLKFLRELK--DYR-KILLFHTPPDLHKGLIHV-----GSAAVRDLIKTYNPDIVLCGHIHE 217 (255)
T ss_dssp HHHHHHHHGGGGGCT--SSE-EEEEESS-BTBCTCTBTT-----SBHHHHHHHHHH--SEEEE-SSS-
T ss_pred HHHHHHHHHHHHhcc--ccc-EEEEEecCCccCCCcccc-----cHHHHHHHHHhcCCcEEEeccccc
Confidence 234456666666653 223 788899998 33322222 347899999999999999999985
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.6e-11 Score=98.97 Aligned_cols=174 Identities=18% Similarity=0.188 Sum_probs=105.8
Q ss_pred CCeeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEcccccc--ccccchhhHHHHHHhhhhhh-cCCceEEccCCCCCCCC
Q 019979 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLS--YADYMQHRWDTFGELVQPLA-SARPWMVTQGNHEKESI 210 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~--~~~~~~~~~~~~~~~~~~l~-~~~P~~~~~GNHD~~~~ 210 (333)
..+|+++++|.|.... ..+.++.+...++|+++++||++ +.+.....-+.. .++.+. ..+|+++++||-|-...
T Consensus 2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~--~~e~l~~~~~~v~avpGNcD~~~v 79 (226)
T COG2129 2 KKMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELN--KLEALKELGIPVLAVPGNCDPPEV 79 (226)
T ss_pred CcceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhh--HHHHHHhcCCeEEEEcCCCChHHH
Confidence 3579999999997754 34556666677999999999999 433321111110 034444 34999999999887321
Q ss_pred CCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEecc--CCC----CCCH-HHHHHHHHHhhcccCCCCCeEE
Q 019979 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSY--ADY----DEYS-DQYRWLKDDLSKVDRKKTPWLL 283 (333)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~--~~~----~~~~-~q~~WL~~~L~~~~~~~~~~~i 283 (333)
. ... +.....- .--+.++|++.|+.+--. +.+ ...+ +-+.-|++.+++.+. .-.|
T Consensus 80 ~------~~l-~~~~~~v--------~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~---~~~I 141 (226)
T COG2129 80 I------DVL-KNAGVNV--------HGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN---PVNI 141 (226)
T ss_pred H------HHH-Hhccccc--------ccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC---cceE
Confidence 1 101 1010000 014567777777774421 111 1123 333455555555432 1139
Q ss_pred EEeccccccCCCCC-CCCChhHHHHHHHHHHhCCCcEEEecCcccc
Q 019979 284 VLLHVPWYNSNEAH-QGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (333)
Q Consensus 284 v~~H~P~~~~~~~~-~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 328 (333)
+++|.||++..... .+........+.+++++.++.+.+|||.|-+
T Consensus 142 l~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs 187 (226)
T COG2129 142 LLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHES 187 (226)
T ss_pred EEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeeccc
Confidence 99999999876542 1112345688999999999999999999964
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.4e-11 Score=99.93 Aligned_cols=51 Identities=24% Similarity=0.393 Sum_probs=36.3
Q ss_pred hhcCCCCeEEccccccccccc--hhhHHHHHHhhhhhh-------cCCceEEccCCCCCC
Q 019979 158 IGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLA-------SARPWMVTQGNHEKE 208 (333)
Q Consensus 158 i~~~~~d~vl~~GDl~~~~~~--~~~~~~~~~~~~~l~-------~~~P~~~~~GNHD~~ 208 (333)
+...+||+||++||+++.... ...|....+.+..+. ..+|++.++||||..
T Consensus 41 i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 41 LQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 357899999999999986543 234654444343332 158999999999995
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.9e-10 Score=108.77 Aligned_cols=172 Identities=22% Similarity=0.321 Sum_probs=101.6
Q ss_pred hhHHHHhh--cCCCCeEEccccccccccc----hhhH---HHHHHhhhhhhcCCceEEccCCCCCCCCCCcccc------
Q 019979 152 KSTLDHIG--QCKYDVHLLPGDLSYADYM----QHRW---DTFGELVQPLASARPWMVTQGNHEKESIPLIMDA------ 216 (333)
Q Consensus 152 ~~~~~~i~--~~~~d~vl~~GDl~~~~~~----~~~~---~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~------ 216 (333)
..+++.|+ ..++|+|+++||++..+.. +... ....+.+......+|+|++.||||......+...
T Consensus 198 es~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~ 277 (577)
T KOG3770|consen 198 ESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRH 277 (577)
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchh
Confidence 35666665 3449999999999864421 1111 2233455556667999999999999643221100
Q ss_pred -----ccccccccc--cCcCCCC-CCCCceEEEE-eCCEEEEEEeccCCC----------CCCHHHHHHHHHHhhcccCC
Q 019979 217 -----FQSYNARWK--MPFEESG-SNSNLYYSFD-VAGAHLIMLGSYADY----------DEYSDQYRWLKDDLSKVDRK 277 (333)
Q Consensus 217 -----~~~~~~~~~--~p~~~~~-~~~~~~ys~~-~g~v~fi~lds~~~~----------~~~~~q~~WL~~~L~~~~~~ 277 (333)
+..+...|. +|..... ...+.+|.-. ++|.++|+||+..-+ ....+|++|+..+|.++..+
T Consensus 278 ~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~ 357 (577)
T KOG3770|consen 278 SQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESA 357 (577)
T ss_pred hhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhc
Confidence 011111111 3332211 1235566543 689999999995321 22478899999999988664
Q ss_pred CCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC--CCcEEEecCccccc
Q 019979 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA--SVDLVLAGHVHAYE 329 (333)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~--~v~lvl~GH~H~y~ 329 (333)
+.+ +=+++|.|+-.. ....+. ...+-.++.++ -+...|.||.|.-+
T Consensus 358 Gek-Vhil~HIPpG~~-~c~~~w----s~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 358 GEK-VHILGHIPPGDG-VCLEGW----SINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred CCE-EEEEEeeCCCCc-chhhhh----hHHHHHHHHHHHHhhhhhccccCccee
Confidence 443 888999997531 112222 23444455554 25567999999643
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.3e-11 Score=98.33 Aligned_cols=122 Identities=26% Similarity=0.320 Sum_probs=71.7
Q ss_pred eeEEEEeecCCCCCh-hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCccc
Q 019979 137 ITFAVAGDLGQTGWT-KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD 215 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~-~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~ 215 (333)
+||+++||+|..... .++++.+ .++|+|+++||+++. ..+.+.++.+ |++++.||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~GNHD~~~------ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVRGNHDNWA------ 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE--CCHSTH------
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEeCCccccc------
Confidence 589999999986432 4566666 569999999999861 3333333333 9999999999731
Q ss_pred cccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCC
Q 019979 216 AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (333)
Q Consensus 216 ~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (333)
+...... .. +.+.+.. .-....|+++|.+++....
T Consensus 62 ----~~~~~~~---------~~-----------------------------~~~~~~~---~~~~~~i~~~H~~~~~~~~ 96 (156)
T PF12850_consen 62 ----FPNENDE---------EY-----------------------------LLDALRL---TIDGFKILLSHGHPYDVQW 96 (156)
T ss_dssp ----HHSEECT---------CS-----------------------------SHSEEEE---EETTEEEEEESSTSSSSTT
T ss_pred ----chhhhhc---------cc-----------------------------cccceee---eecCCeEEEECCCCccccc
Confidence 1100000 00 1111110 0113588889987655321
Q ss_pred CCCCCChhHHHHHHHHHHhCCCcEEEecCcccccc
Q 019979 296 AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 296 ~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
..+.+..++...+++++++||.|....
T Consensus 97 --------~~~~~~~~~~~~~~~~~~~GH~H~~~~ 123 (156)
T PF12850_consen 97 --------DPAELREILSRENVDLVLHGHTHRPQV 123 (156)
T ss_dssp --------THHHHHHHHHHTTSSEEEESSSSSEEE
T ss_pred --------ChhhhhhhhcccCCCEEEcCCcccceE
Confidence 234566788899999999999998654
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.12 E-value=9.4e-10 Score=96.02 Aligned_cols=69 Identities=19% Similarity=0.139 Sum_probs=46.9
Q ss_pred EEEeecCCCCCh----hhHHHHhhc--CCCCeEEccccccccc----cchhhHHHHHHhhhhhhc-CCceEEccCCCCCC
Q 019979 140 AVAGDLGQTGWT----KSTLDHIGQ--CKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLAS-ARPWMVTQGNHEKE 208 (333)
Q Consensus 140 ~~~gD~~~~~~~----~~~~~~i~~--~~~d~vl~~GDl~~~~----~~~~~~~~~~~~~~~l~~-~~P~~~~~GNHD~~ 208 (333)
+++||+|.+... +..++.+.+ .+||+|+++||+++.- ......+.+.+.++.+.. ..|+++++||||..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCchh
Confidence 689999977532 334555543 3799999999999631 112223445556666655 38999999999984
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.3e-10 Score=91.34 Aligned_cols=51 Identities=24% Similarity=0.350 Sum_probs=35.4
Q ss_pred hhcCCCCeEEccccccccccc--hhhHHHHHHhhhhhhc---CCceEEccCCCCCC
Q 019979 158 IGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLAS---ARPWMVTQGNHEKE 208 (333)
Q Consensus 158 i~~~~~d~vl~~GDl~~~~~~--~~~~~~~~~~~~~l~~---~~P~~~~~GNHD~~ 208 (333)
+...+||+|+++||+++.... ...|..+...+..+.. ..|++.++||||..
T Consensus 34 i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 34 LWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 447899999999999975432 3445444433333322 48999999999984
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.9e-10 Score=88.58 Aligned_cols=103 Identities=19% Similarity=0.185 Sum_probs=67.9
Q ss_pred EEEeecCCCCChhhHHHHh--hcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCccccc
Q 019979 140 AVAGDLGQTGWTKSTLDHI--GQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAF 217 (333)
Q Consensus 140 ~~~gD~~~~~~~~~~~~~i--~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~ 217 (333)
+++||+|.. ...++.+ ...++|.++++||+.. ... ..+..+ ...|++.+.||||
T Consensus 1 ~viSDtH~~---~~~~~~~~~~~~~~d~ii~~GD~~~-----~~~----~~~~~~-~~~~~~~V~GN~D----------- 56 (129)
T cd07403 1 LVISDTESP---ALYSPEIKVRLEGVDLILSAGDLPK-----EYL----EYLVTM-LNVPVYYVHGNHD----------- 56 (129)
T ss_pred CeeccccCc---cccchHHHhhCCCCCEEEECCCCCh-----HHH----HHHHHH-cCCCEEEEeCCCc-----------
Confidence 479999943 2233332 2588999999999852 112 222222 2368999999999
Q ss_pred cccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCC
Q 019979 218 QSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAH 297 (333)
Q Consensus 218 ~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~ 297 (333)
.+|+++|+|++......
T Consensus 57 ---------------------------------------------------------------~~Ilv~H~pp~~~~~~~ 73 (129)
T cd07403 57 ---------------------------------------------------------------VDILLTHAPPAGIGDGE 73 (129)
T ss_pred ---------------------------------------------------------------cCEEEECCCCCcCcCcc
Confidence 25888898876443211
Q ss_pred CCCChhHHHHHHHHHHhCCCcEEEecCcccccc
Q 019979 298 QGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 298 ~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
. ......+.+.+++.+++++++|+||.|....
T Consensus 74 ~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~ 105 (129)
T cd07403 74 D-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYG 105 (129)
T ss_pred c-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcC
Confidence 1 0112346788888999999999999997543
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.3e-09 Score=92.37 Aligned_cols=120 Identities=18% Similarity=0.128 Sum_probs=75.5
Q ss_pred eEEEEeecCCCCChhhHHHHhh----cCCCCeEEccccccccccc---------------------hhhH----HHH--H
Q 019979 138 TFAVAGDLGQTGWTKSTLDHIG----QCKYDVHLLPGDLSYADYM---------------------QHRW----DTF--G 186 (333)
Q Consensus 138 ~f~~~gD~~~~~~~~~~~~~i~----~~~~d~vl~~GDl~~~~~~---------------------~~~~----~~~--~ 186 (333)
||++.|+.+...........+. +.+||++|++||.+|.+.. ...+ ..+ .
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5778888766544444445553 7899999999999998752 1111 111 1
Q ss_pred HhhhhhhcCCceEEccCCCCCCCCCCcc---------------ccccccccccccCcCCCC--CCCCceEEEEeCCE-EE
Q 019979 187 ELVQPLASARPWMVTQGNHEKESIPLIM---------------DAFQSYNARWKMPFEESG--SNSNLYYSFDVAGA-HL 248 (333)
Q Consensus 187 ~~~~~l~~~~P~~~~~GNHD~~~~~~~~---------------~~~~~~~~~~~~p~~~~~--~~~~~~ys~~~g~v-~f 248 (333)
..++.+.+.+|++.++.+||+.++.... .....|......+..... .....|+++.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 2456677779999999999997543210 111233333332222111 23478999999986 99
Q ss_pred EEEeccCCC
Q 019979 249 IMLGSYADY 257 (333)
Q Consensus 249 i~lds~~~~ 257 (333)
++||+....
T Consensus 161 ~~lD~R~~R 169 (228)
T cd07389 161 ILLDTRTYR 169 (228)
T ss_pred EEEeccccc
Confidence 999997543
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.1e-09 Score=93.27 Aligned_cols=175 Identities=15% Similarity=0.082 Sum_probs=90.8
Q ss_pred eeEEEEeecCCCC------C----hhhHHHHhhcCCCC-eEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCC
Q 019979 137 ITFAVAGDLGQTG------W----TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNH 205 (333)
Q Consensus 137 ~~f~~~gD~~~~~------~----~~~~~~~i~~~~~d-~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNH 205 (333)
++|+.++|+|... . ...+++++++.+|| +++.+||++....... +......++.+...-.-+.++|||
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~-~~~~~~~~~~l~~~g~d~~~~GNH 79 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST-ATKGEANIELMNALGYDAVTIGNH 79 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh-ccCCcHHHHHHHhcCCCEEeeccc
Confidence 5899999999432 1 13566777777788 7899999987544311 111122233332223456678999
Q ss_pred CCCCCCCccccccccccccccCc---C----C---CCCCCCceEEEEeCCEEEE--EEeccCCCC-------C---CHHH
Q 019979 206 EKESIPLIMDAFQSYNARWKMPF---E----E---SGSNSNLYYSFDVAGAHLI--MLGSYADYD-------E---YSDQ 263 (333)
Q Consensus 206 D~~~~~~~~~~~~~~~~~~~~p~---~----~---~~~~~~~~ys~~~g~v~fi--~lds~~~~~-------~---~~~q 263 (333)
|+..... .+....+....|. + . .......|..++.+++++- .+....... . ....
T Consensus 80 e~d~g~~---~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~ 156 (252)
T cd00845 80 EFDYGLD---ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWIIGLPFEDL 156 (252)
T ss_pred cccccHH---HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcccCceecCH
Confidence 9953221 1221211111110 0 0 0011234556788875544 443321100 0 0122
Q ss_pred HHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccccc
Q 019979 264 YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 264 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
.+.+++..++.+ .+...+|++.|.|... ...+.+.+ .++|++|+||.|....
T Consensus 157 ~~~~~~~~~~~~-~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 157 AEAVAVAEELLA-EGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred HHHHHHHHHHHh-CCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccC
Confidence 233433222222 3667899999987532 11222212 5899999999998654
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.7e-09 Score=85.58 Aligned_cols=61 Identities=16% Similarity=0.192 Sum_probs=41.7
Q ss_pred eeEEEEeecCCCCCh-hhHHHHhhcC-CCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCC
Q 019979 137 ITFAVAGDLGQTGWT-KSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~-~~~~~~i~~~-~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~ 207 (333)
+|++++||+|..... +..++.+... ++|.|+++||++. .. ..+.++.+ ..|++.+.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~----~~----~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS----PF----VLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC----HH----HHHHHHHh--CCceEEEccCCCc
Confidence 479999999965432 3344555555 8999999999982 11 12223332 2589999999997
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.1e-09 Score=87.85 Aligned_cols=58 Identities=22% Similarity=0.352 Sum_probs=40.3
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
|++++||+|.... ..++++.+.+ +|.|+++||+++...... +....|++.++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE-----------LELKAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch-----------hhcCCcEEEEeCCCCCc
Confidence 5899999996541 2334444433 999999999987543211 23347899999999983
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.94 E-value=4e-08 Score=86.80 Aligned_cols=175 Identities=18% Similarity=0.157 Sum_probs=96.0
Q ss_pred EEEEeecCCCCChhhHHH---Hhh---cCCCCeEEccccccccccch-----------hhHHHHHHhhhhhh-cCCceEE
Q 019979 139 FAVAGDLGQTGWTKSTLD---HIG---QCKYDVHLLPGDLSYADYMQ-----------HRWDTFGELVQPLA-SARPWMV 200 (333)
Q Consensus 139 f~~~gD~~~~~~~~~~~~---~i~---~~~~d~vl~~GDl~~~~~~~-----------~~~~~~~~~~~~l~-~~~P~~~ 200 (333)
|++.||+|.. ...+.+ .+. ..++|++|++||+....... ..+..|.+.++... ..+|+++
T Consensus 1 i~v~Gd~HG~--~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGE--LDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIF 78 (262)
T ss_pred CEEEecCCcc--HHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEE
Confidence 5789999863 333433 222 35799999999995322111 12333444444332 3478899
Q ss_pred ccCCCCCCCCCCccccccccccccccCcCCCCCCCCce-----EEEEeCCEEEEEEeccC---CCC--------CCHHHH
Q 019979 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLY-----YSFDVAGAHLIMLGSYA---DYD--------EYSDQY 264 (333)
Q Consensus 201 ~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-----ys~~~g~v~fi~lds~~---~~~--------~~~~q~ 264 (333)
+.||||... .+.. ++..+ -...+.+ ..+++++++|..|.... ++. ..+.++
T Consensus 79 i~GNHE~~~------~l~~------l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~ 145 (262)
T cd00844 79 IGGNHEASN------YLWE------LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTK 145 (262)
T ss_pred ECCCCCCHH------HHHh------hcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHH
Confidence 999999631 1110 11100 0001222 34667899999987621 111 112333
Q ss_pred HHHH-------HHhhcccCCCCCeEEEEeccccccCCCCCCC---------------CChhHHHHHHHHHHhCCCcEEEe
Q 019979 265 RWLK-------DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG---------------EGDGMMAIMEPLLYAASVDLVLA 322 (333)
Q Consensus 265 ~WL~-------~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~---------------~~~~~~~~l~~l~~~~~v~lvl~ 322 (333)
..+. ..|..... . --|+++|.|+......... ........+..++++.++++.|+
T Consensus 146 rs~y~~r~~~~~kl~~~~~-~--vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~ 222 (262)
T cd00844 146 RSAYHVRNIEVFKLKQLKQ-P--IDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFS 222 (262)
T ss_pred HHhhhhhHHHHHHHHhcCC-C--CcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEE
Confidence 2211 11222211 2 3699999998765332110 00113467889999999999999
Q ss_pred cCccc-cccc
Q 019979 323 GHVHA-YERS 331 (333)
Q Consensus 323 GH~H~-y~R~ 331 (333)
||.|. |++.
T Consensus 223 gH~H~~f~~~ 232 (262)
T cd00844 223 AHLHVKFAAL 232 (262)
T ss_pred ecCCccccee
Confidence 99998 6654
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.2e-08 Score=95.38 Aligned_cols=74 Identities=22% Similarity=0.151 Sum_probs=50.3
Q ss_pred CCeeEEEEeecCCCCCh-------------hhHHHHhhcCCCCeEEccccccccccc-hhhHHHHHHhhhh---------
Q 019979 135 FPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQP--------- 191 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vl~~GDl~~~~~~-~~~~~~~~~~~~~--------- 191 (333)
..+||++++|+|.+... .++++.+.+.++|+||++||+.+.... ......+.+.++.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~ 81 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCE 81 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccc
Confidence 56899999999976311 234555568899999999999976543 2222222333332
Q ss_pred ---h----------------------hcCCceEEccCCCCCC
Q 019979 192 ---L----------------------ASARPWMVTQGNHEKE 208 (333)
Q Consensus 192 ---l----------------------~~~~P~~~~~GNHD~~ 208 (333)
+ ...+|++++.||||..
T Consensus 82 ~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 82 LEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred hhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1258999999999985
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.5e-08 Score=89.56 Aligned_cols=179 Identities=15% Similarity=0.119 Sum_probs=93.4
Q ss_pred eeEEEEeecCCCCC-----------------hhhHHHHhhcCCCCeEEc-cccccccccchhhH---------HHHHHhh
Q 019979 137 ITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYDVHLL-PGDLSYADYMQHRW---------DTFGELV 189 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-----------------~~~~~~~i~~~~~d~vl~-~GDl~~~~~~~~~~---------~~~~~~~ 189 (333)
++|+.++|+|..-. ....++++++.+|+.+++ +||+...... ..+ ....+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPL-ADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHH-HHHhhhcccCCCChHHHHH
Confidence 47888999974310 134566666677888776 9999864331 112 1122333
Q ss_pred hhhhcCCceEEccCCCCCCCCCCccccccccccccccCc---C----C-CCCCCCceEEEEeC-CEEEEEEeccCCC---
Q 019979 190 QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----E-SGSNSNLYYSFDVA-GAHLIMLGSYADY--- 257 (333)
Q Consensus 190 ~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~-~~~~~~~~ys~~~g-~v~fi~lds~~~~--- 257 (333)
+.+ -+-+.++||||+.... ..+....+....|. | . .......|..++.+ ++++-++.-....
T Consensus 80 n~~---g~d~~~lGNHe~d~g~---~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~~ 153 (277)
T cd07410 80 NAL---GYDAGTLGNHEFNYGL---DYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIPN 153 (277)
T ss_pred Hhc---CCCEEeecccCcccCH---HHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCccccc
Confidence 333 2346678999985322 11222222222221 0 0 01112456678888 8666555532111
Q ss_pred ------------CCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHh-CCCcEEEecC
Q 019979 258 ------------DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGH 324 (333)
Q Consensus 258 ------------~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH 324 (333)
....+..++..+.|++ ++...+|+++|.+........ .. .......+.++ .+||++|+||
T Consensus 154 ~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~-~~---~~~~~~~la~~~~~vD~IlgGH 226 (277)
T cd07410 154 WEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEES-LT---GENAAYELAEEVPGIDAILTGH 226 (277)
T ss_pred ccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccc-cC---CccHHHHHHhcCCCCcEEEeCC
Confidence 0012233444444443 356789999998865322100 01 11222344444 5899999999
Q ss_pred ccccc
Q 019979 325 VHAYE 329 (333)
Q Consensus 325 ~H~y~ 329 (333)
.|...
T Consensus 227 sH~~~ 231 (277)
T cd07410 227 QHRRF 231 (277)
T ss_pred Ccccc
Confidence 99754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.4e-08 Score=89.28 Aligned_cols=72 Identities=17% Similarity=0.129 Sum_probs=48.3
Q ss_pred eeEEEEeecCCCCCh-------------hhHHHHhhcCCCCeEEccccccccccc--hhhHHHHHH-hhhhhhc-CCceE
Q 019979 137 ITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYM--QHRWDTFGE-LVQPLAS-ARPWM 199 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vl~~GDl~~~~~~--~~~~~~~~~-~~~~l~~-~~P~~ 199 (333)
+||+++||+|.+... .++++.+.+.+||+||++||+.+.... ........+ +++.+.. .+|++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 589999999986331 234444568899999999999976422 122222222 2444433 58999
Q ss_pred EccCCCCCC
Q 019979 200 VTQGNHEKE 208 (333)
Q Consensus 200 ~~~GNHD~~ 208 (333)
.++||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999984
|
|
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.8e-08 Score=88.12 Aligned_cols=172 Identities=19% Similarity=0.231 Sum_probs=89.7
Q ss_pred eeEEEEeecCCCCC-----------hhhHHHHhhcCCCC-eEEccccccccccchh--hHHHHHHhhhhhhcCCceEEcc
Q 019979 137 ITFAVAGDLGQTGW-----------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELVQPLASARPWMVTQ 202 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-----------~~~~~~~i~~~~~d-~vl~~GDl~~~~~~~~--~~~~~~~~~~~l~~~~P~~~~~ 202 (333)
++|+.++|.|.-.. ....++++++.+++ +++.+||++....... ..+...+.++.+ -.-+.++
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l---~~d~~~~ 77 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNAL---GVDLACF 77 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhc---CCcEEee
Confidence 47888888873111 13456666667788 8999999986432211 112222333332 2336689
Q ss_pred CCCCCCCCCCccccccccccccccCc---C----CC-C--CCCCceEEEEeCCEEE--EEEeccCCC------CC---CH
Q 019979 203 GNHEKESIPLIMDAFQSYNARWKMPF---E----ES-G--SNSNLYYSFDVAGAHL--IMLGSYADY------DE---YS 261 (333)
Q Consensus 203 GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~-~--~~~~~~ys~~~g~v~f--i~lds~~~~------~~---~~ 261 (333)
||||+.... ..+....+....|. | .. . ..-+.|..++.+++++ +.+.+.... .. ..
T Consensus 78 GNHefd~g~---~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~~~~~~ 154 (257)
T cd07406 78 GNHEFDFGE---DQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPEYVRYR 154 (257)
T ss_pred cccccccCH---HHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCCcceEc
Confidence 999995322 12221111111111 0 00 0 0125677888898554 444432111 00 11
Q ss_pred HHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHh-CCCcEEEecCccccc
Q 019979 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAYE 329 (333)
Q Consensus 262 ~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y~ 329 (333)
+-.+.+++.+++..+.+...+|++.|-+... ... +.++ .++|++|+||.|...
T Consensus 155 d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~------------d~~---la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 155 DYVETARELVDELREQGADLIIALTHMRLPN------------DKR---LAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHH---HHHhCCCCceEEecccceeE
Confidence 2233344444333334677899999987421 012 2333 489999999999754
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.1e-08 Score=85.42 Aligned_cols=57 Identities=16% Similarity=0.250 Sum_probs=35.6
Q ss_pred hHHHHhh-cCCCCeEEccccccccccc-hhhHHHH-HHhhhhhh-------------------cCCceEEccCCCCCCC
Q 019979 153 STLDHIG-QCKYDVHLLPGDLSYADYM-QHRWDTF-GELVQPLA-------------------SARPWMVTQGNHEKES 209 (333)
Q Consensus 153 ~~~~~i~-~~~~d~vl~~GDl~~~~~~-~~~~~~~-~~~~~~l~-------------------~~~P~~~~~GNHD~~~ 209 (333)
...+.+. ..+||.|+++||+.+..-. +++|... .++.+.+. ..+|++.++||||.+.
T Consensus 34 ~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 34 HIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred HHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 3444443 6799999999999964321 3444332 22222221 1389999999999953
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.7e-08 Score=93.76 Aligned_cols=73 Identities=23% Similarity=0.256 Sum_probs=53.6
Q ss_pred eeEEEEeecCCC-CCh-------------hhHHHHhhcCCCCeEEccccccccccc-hhhHHHHHHhhhhhhc-CCceEE
Q 019979 137 ITFAVAGDLGQT-GWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARPWMV 200 (333)
Q Consensus 137 ~~f~~~gD~~~~-~~~-------------~~~~~~i~~~~~d~vl~~GDl~~~~~~-~~~~~~~~~~~~~l~~-~~P~~~ 200 (333)
+||++++|+|.+ ... ..+++.+.+.++||||++||+.+.... ...-..+.+.++.+.. .+|+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 589999999988 211 235556678999999999999986543 2333445566666643 599999
Q ss_pred ccCCCCCCC
Q 019979 201 TQGNHEKES 209 (333)
Q Consensus 201 ~~GNHD~~~ 209 (333)
+.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999953
|
|
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.4e-07 Score=78.85 Aligned_cols=60 Identities=17% Similarity=0.241 Sum_probs=40.4
Q ss_pred eEEEEeecCCCCCh----hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCC
Q 019979 138 TFAVAGDLGQTGWT----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (333)
Q Consensus 138 ~f~~~gD~~~~~~~----~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~ 207 (333)
+++++||+|..... ..+.+.++..++|.|+++||+++ ...+ +.++.+. .|++.|.||||.
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~----~~~~----~~l~~~~--~~~~~V~GN~D~ 64 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS----KETY----DYLKTIA--PDVHIVRGDFDE 64 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC----HHHH----HHHHhhC--CceEEEECCCCc
Confidence 57999999954332 23444454568999999999985 1222 2233332 479999999997
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.3e-08 Score=85.31 Aligned_cols=174 Identities=14% Similarity=0.093 Sum_probs=85.8
Q ss_pred EEEeecCCCCChh---hHHHHhh-c---CCCCeEEcccccccccc--c---hhhHHH-HHHhhhhhhcCCceEEccCCCC
Q 019979 140 AVAGDLGQTGWTK---STLDHIG-Q---CKYDVHLLPGDLSYADY--M---QHRWDT-FGELVQPLASARPWMVTQGNHE 206 (333)
Q Consensus 140 ~~~gD~~~~~~~~---~~~~~i~-~---~~~d~vl~~GDl~~~~~--~---~~~~~~-~~~~~~~l~~~~P~~~~~GNHD 206 (333)
+++||+|.+.... .....+. . .++|.++++||+++.-. . ...... +...++......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 4799999775432 2222222 2 58999999999996311 1 111122 2334444455689999999999
Q ss_pred CCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEe
Q 019979 207 KESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLL 286 (333)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~ 286 (333)
...... +........ .......+.+++.++++.-... ++.......|+...+..... .+.++..
T Consensus 81 ~~~~~~-------~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~~~~~~---~~~~~~~ 144 (217)
T cd07398 81 FLLGDF-------FAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLGRNPYD---QLLFLNR 144 (217)
T ss_pred HHHHhH-------HHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHhCcHHH---HHHHhcc
Confidence 842111 000000000 0011215677888888876532 22233344444443221100 0000000
Q ss_pred ccc---------ccc------CCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 287 HVP---------WYN------SNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 287 H~P---------~~~------~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
+.. ... .............+.+..++++++++++++||+|...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~ 202 (217)
T cd07398 145 PLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPA 202 (217)
T ss_pred hHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 000 000 0000000111234566677788999999999999754
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.9e-07 Score=84.18 Aligned_cols=185 Identities=17% Similarity=0.165 Sum_probs=90.4
Q ss_pred eeEEEEeecCCCCC---------------hhhHHHHhhcCCCC-eEEccccccccccchhhH---HHHHHhhhhhhcCCc
Q 019979 137 ITFAVAGDLGQTGW---------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHRW---DTFGELVQPLASARP 197 (333)
Q Consensus 137 ~~f~~~gD~~~~~~---------------~~~~~~~i~~~~~d-~vl~~GDl~~~~~~~~~~---~~~~~~~~~l~~~~P 197 (333)
++|+.++|+|..-. ....++++++..++ +++.+||++........+ ....+.+..+. .-
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g--~D 78 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMG--VD 78 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhC--Ce
Confidence 47899999984311 12345555555564 899999998543321111 11222333222 22
Q ss_pred eEEccCCCCCCCCCCccccccccc------------------ccccc-----CcCCCC-CCCCceEEEEeCCEEEEEEec
Q 019979 198 WMVTQGNHEKESIPLIMDAFQSYN------------------ARWKM-----PFEESG-SNSNLYYSFDVAGAHLIMLGS 253 (333)
Q Consensus 198 ~~~~~GNHD~~~~~~~~~~~~~~~------------------~~~~~-----p~~~~~-~~~~~~ys~~~g~v~fi~lds 253 (333)
+.++||||+..... .+..+. ..|.. .....+ ..-..|..++.+++++-++.-
T Consensus 79 -a~t~GNHefd~G~~---~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~G~kIgviGl 154 (288)
T cd07412 79 -ASAVGNHEFDEGYA---ELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVGGVKVGFIGA 154 (288)
T ss_pred -eeeecccccccCHH---HHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEECCEEEEEEee
Confidence 46889999953221 111110 11111 000000 112345567888855544443
Q ss_pred cCCC-----C-------CCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHh--CCCcE
Q 019979 254 YADY-----D-------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA--ASVDL 319 (333)
Q Consensus 254 ~~~~-----~-------~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~--~~v~l 319 (333)
.... . ...+-.+-+++.+++.+.++...+|+++|.............. ......+++.+ .++|+
T Consensus 155 ~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~~~~--~~~~~~~l~~~~~~~iD~ 232 (288)
T cd07412 155 VTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDTCSA--ASGPIADIVNRLDPDVDV 232 (288)
T ss_pred cCCCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCccccc--cChhHHHHHhhcCCCCCE
Confidence 1110 0 0122234455544444333677899999987643222111000 11122334444 38999
Q ss_pred EEecCccccc
Q 019979 320 VLAGHVHAYE 329 (333)
Q Consensus 320 vl~GH~H~y~ 329 (333)
+|+||.|...
T Consensus 233 IlgGHsH~~~ 242 (288)
T cd07412 233 VFAGHTHQAY 242 (288)
T ss_pred EEeCccCccc
Confidence 9999999864
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.7e-07 Score=74.45 Aligned_cols=147 Identities=20% Similarity=0.291 Sum_probs=77.2
Q ss_pred CCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEE
Q 019979 162 KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSF 241 (333)
Q Consensus 162 ~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~ 241 (333)
.-|.|++.||++.+-..++. ..=++.+..|- -.-+.+.||||+.-... +...+. +|.. . --..-.|
T Consensus 43 ~eDiVllpGDiSWaM~l~ea-~~Dl~~i~~LP--G~K~m~rGNHDYWw~s~-----skl~n~--lp~~-l---~~~n~~f 108 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEA-EEDLRFIGDLP--GTKYMIRGNHDYWWSSI-----SKLNNA--LPPI-L---FYLNNGF 108 (230)
T ss_pred hhhEEEecccchhheechhh-hhhhhhhhcCC--CcEEEEecCCccccchH-----HHHHhh--cCch-H---hhhccce
Confidence 34899999999865443221 12233444443 23466999999953211 111111 1210 0 0001124
Q ss_pred EeCCEEEEEEecc----CCCCCCHHH--H------HHHHH-HhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHH
Q 019979 242 DVAGAHLIMLGSY----ADYDEYSDQ--Y------RWLKD-DLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIM 308 (333)
Q Consensus 242 ~~g~v~fi~lds~----~~~~~~~~q--~------~WL~~-~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l 308 (333)
.++++.++..-.. .++....+| . .-|+. ..++.++ ...-.|||.|.|+++..... ..+
T Consensus 109 ~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k-~~~~fivM~HYPP~s~~~t~--------~~~ 179 (230)
T COG1768 109 ELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPK-GVSKFIVMTHYPPFSDDGTP--------GPF 179 (230)
T ss_pred eEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhccc-CcCeEEEEEecCCCCCCCCC--------cch
Confidence 5555444443221 112112222 1 22333 2223332 44458999999998754321 356
Q ss_pred HHHHHhCCCcEEEecCccccccc
Q 019979 309 EPLLYAASVDLVLAGHVHAYERS 331 (333)
Q Consensus 309 ~~l~~~~~v~lvl~GH~H~y~R~ 331 (333)
.+++++++|+.++.||.|--.|-
T Consensus 180 sevlee~rv~~~lyGHlHgv~~p 202 (230)
T COG1768 180 SEVLEEGRVSKCLYGHLHGVPRP 202 (230)
T ss_pred HHHHhhcceeeEEeeeccCCCCC
Confidence 77888999999999999987764
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.6e-07 Score=83.32 Aligned_cols=181 Identities=17% Similarity=0.186 Sum_probs=88.1
Q ss_pred eeEEEEeecCCCCC--------h---hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcC-CceEEccCC
Q 019979 137 ITFAVAGDLGQTGW--------T---KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA-RPWMVTQGN 204 (333)
Q Consensus 137 ~~f~~~gD~~~~~~--------~---~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~-~P~~~~~GN 204 (333)
++|+.++|+|..-. . ...++++++.+.++++.+||+...... ..+..-...++.+... ..+ .++||
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~g~d~-~~~GN 78 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAVGYDA-VTPGN 78 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhcCCcE-Ecccc
Confidence 47899999985311 1 234455544467899999999864321 1111111222223222 344 57899
Q ss_pred CCCCCCCCccccccccccccccCcC-------CCCC-CCCceEEEEeC-CE--EEEEEeccCC-C-C--C------CHHH
Q 019979 205 HEKESIPLIMDAFQSYNARWKMPFE-------ESGS-NSNLYYSFDVA-GA--HLIMLGSYAD-Y-D--E------YSDQ 263 (333)
Q Consensus 205 HD~~~~~~~~~~~~~~~~~~~~p~~-------~~~~-~~~~~ys~~~g-~v--~fi~lds~~~-~-~--~------~~~q 263 (333)
||+.... +.+..+.+....|.- ..+. .-..|..++.+ ++ -|+.+-+... . . . ..+-
T Consensus 79 Hefd~G~---~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~~~d~ 155 (257)
T cd07408 79 HEFDYGL---DRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKDVTFEDP 155 (257)
T ss_pred ccccCCH---HHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCCcEEecH
Confidence 9995322 122222222222211 0010 11235556777 64 4555544210 0 0 0 0112
Q ss_pred HHHHHHH-hhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccccc
Q 019979 264 YRWLKDD-LSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 264 ~~WL~~~-L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
.+-+++. ..+.++.++..+|++.|.+....... . ....+.. +-.++|++|.||.|....
T Consensus 156 ~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~----~--~~~~la~--~~~giDvIigGH~H~~~~ 215 (257)
T cd07408 156 IEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP----W--TSTELAA--NVTGIDLIIDGHSHTTIE 215 (257)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC----c--cHHHHHH--hCCCceEEEeCCCccccc
Confidence 2223333 22222236778999999886543111 0 1122222 124899999999998653
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.4e-07 Score=82.52 Aligned_cols=156 Identities=19% Similarity=0.127 Sum_probs=78.3
Q ss_pred hHHHHhhcC-CCCeE-EccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCccccccccccccccCc--
Q 019979 153 STLDHIGQC-KYDVH-LLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF-- 228 (333)
Q Consensus 153 ~~~~~i~~~-~~d~v-l~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~-- 228 (333)
..++++++. ++|.+ +.+||+...... ..+......++.+. ..++.++.||||+..... .+....+....|.
T Consensus 40 ~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~l~-~~g~da~~GNHefd~g~~---~l~~~~~~~~~~~l~ 114 (264)
T cd07411 40 TLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMVDALN-ALGVDAMVGHWEFTYGPE---RVRELFGRLNWPFLA 114 (264)
T ss_pred HHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHHHHHH-hhCCeEEecccccccCHH---HHHHHHhhCCCCEEE
Confidence 455666666 88877 579999965432 12221122222222 255555559999964321 2222222222221
Q ss_pred -C----C-CCCCCCceEEEEeCCEE--EEEEeccCCCC--C--------CHHHHHHHHHHhhccc-CCCCCeEEEEeccc
Q 019979 229 -E----E-SGSNSNLYYSFDVAGAH--LIMLGSYADYD--E--------YSDQYRWLKDDLSKVD-RKKTPWLLVLLHVP 289 (333)
Q Consensus 229 -~----~-~~~~~~~~ys~~~g~v~--fi~lds~~~~~--~--------~~~q~~WL~~~L~~~~-~~~~~~~iv~~H~P 289 (333)
| . .......|..++.++++ ||.+.+..... . .....+.+++.+++.. +.+...+|++.|-+
T Consensus 115 aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g 194 (264)
T cd07411 115 ANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNG 194 (264)
T ss_pred EEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 0 0 00112345667888855 55554321100 0 0223344444433321 23567899999987
Q ss_pred cccCCCCCCCCChhHHHHHHHHHHh-CCCcEEEecCcccc
Q 019979 290 WYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAY 328 (333)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 328 (333)
... + . .+.++ .+||++|+||.|..
T Consensus 195 ~~~---------~---~---~la~~~~~iDlilgGH~H~~ 219 (264)
T cd07411 195 LPV---------D---V---ELAERVPGIDVILSGHTHER 219 (264)
T ss_pred chh---------h---H---HHHhcCCCCcEEEeCccccc
Confidence 421 0 1 22233 47999999999964
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.61 E-value=5.2e-07 Score=81.06 Aligned_cols=156 Identities=15% Similarity=0.182 Sum_probs=80.1
Q ss_pred hHHHHhhcCCCC-eEEccccccccccchh--hHHHHHHhhhhhhcCCceEEccCCCCCCCCCCccccccccccccccCcC
Q 019979 153 STLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE 229 (333)
Q Consensus 153 ~~~~~i~~~~~d-~vl~~GDl~~~~~~~~--~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~ 229 (333)
..++++++.+++ +++.+||+........ ..+...+.+..+. .. +.++||||+..... .+..+.+....|.-
T Consensus 39 ~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~g--~D-~~~lGNHefd~G~~---~l~~~~~~~~~p~l 112 (281)
T cd07409 39 TLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLLG--YD-AMTLGNHEFDDGVE---GLAPFLNNLKFPVL 112 (281)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhcC--CC-EEEeccccccCCHH---HHHHHHHhCCCCEE
Confidence 355566556677 5666999986433211 1122223333322 34 45679999964321 22222222222210
Q ss_pred ------CC-----CCCCCceEEEEeCCEEEE--EEeccCC--CC---C---CHHHHHHHHHHhhcccCCCCCeEEEEecc
Q 019979 230 ------ES-----GSNSNLYYSFDVAGAHLI--MLGSYAD--YD---E---YSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (333)
Q Consensus 230 ------~~-----~~~~~~~ys~~~g~v~fi--~lds~~~--~~---~---~~~q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (333)
.. ...-..|..++.+++++- .+-+... .. . ..+..+.+++.+++.+.++...+|++.|-
T Consensus 113 ~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~ 192 (281)
T cd07409 113 SANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHS 192 (281)
T ss_pred EEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 00 011134566788885544 4433211 00 0 12334556666666544457789999998
Q ss_pred ccccCCCCCCCCChhHHHHHHHHHHh-CCCcEEEecCccccc
Q 019979 289 PWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAYE 329 (333)
Q Consensus 289 P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y~ 329 (333)
+... .. ++.++ .++|++++||.|...
T Consensus 193 G~~~------------d~---~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 193 GYEV------------DK---EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred Cchh------------HH---HHHHcCCCCcEEEeCCcCccc
Confidence 6421 11 23333 489999999999863
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.8e-07 Score=82.72 Aligned_cols=72 Identities=18% Similarity=0.238 Sum_probs=51.2
Q ss_pred eeEEEEeecCCCCCh-------------hhHHHHhhcCCCCeEEccccccccccch-hhHHHHHHhhhhhhc-C-CceEE
Q 019979 137 ITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQ-HRWDTFGELVQPLAS-A-RPWMV 200 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vl~~GDl~~~~~~~-~~~~~~~~~~~~l~~-~-~P~~~ 200 (333)
+||++++|+|.+... ..+++.+.+.++|+||++||+.+..... .....+.+.++.+.. . +|+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 589999999986421 2344455678999999999999865432 223345556666644 3 89999
Q ss_pred ccCCCCCC
Q 019979 201 TQGNHEKE 208 (333)
Q Consensus 201 ~~GNHD~~ 208 (333)
++||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999984
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.8e-07 Score=80.21 Aligned_cols=69 Identities=19% Similarity=0.008 Sum_probs=42.0
Q ss_pred EEEeecCCCCC-hhhHHHHhh--------cCCCCeEEccccccccccch-hhHHHHHHhhhhh-hcCCceEEccCCCCCC
Q 019979 140 AVAGDLGQTGW-TKSTLDHIG--------QCKYDVHLLPGDLSYADYMQ-HRWDTFGELVQPL-ASARPWMVTQGNHEKE 208 (333)
Q Consensus 140 ~~~gD~~~~~~-~~~~~~~i~--------~~~~d~vl~~GDl~~~~~~~-~~~~~~~~~~~~l-~~~~P~~~~~GNHD~~ 208 (333)
+++||+|.... ..++++.+. ..+.|.++++||+++.+... ...+.+.+..... ....+++.+.||||..
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 47999986632 234454443 24689999999999866532 2222222221111 1236799999999984
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.49 E-value=8.2e-07 Score=81.72 Aligned_cols=113 Identities=18% Similarity=0.137 Sum_probs=73.2
Q ss_pred CCCeeEEEEeecCCCCCh------------------hhHHHHh-hcCCCCeEEccccccccccc--hhhHHHHHHhhhhh
Q 019979 134 QFPITFAVAGDLGQTGWT------------------KSTLDHI-GQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPL 192 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~------------------~~~~~~i-~~~~~d~vl~~GDl~~~~~~--~~~~~~~~~~~~~l 192 (333)
+..+|+++++|.|.-+.. +.....+ ...+||.++++||+.+.+.. .++|.+..+-+..+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkI 125 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKI 125 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHh
Confidence 688999999999865410 1122222 26799999999999986543 56665544334444
Q ss_pred h---cCCceEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccC
Q 019979 193 A---SARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA 255 (333)
Q Consensus 193 ~---~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~ 255 (333)
. ..+|++.++||||.+.... .......+|.-- .++..-.|+.|+..|+++|++.
T Consensus 126 f~~k~~~~~~~i~GNhDIGf~~~---~~~~~i~Rfe~~------fg~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 126 FGRKGNIKVIYIAGNHDIGFGNE---LIPEWIDRFESV------FGPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred hCCCCCCeeEEeCCccccccccc---cchhHHHHHHHh------hcchhhhhccCCceeEEeeehh
Confidence 3 2599999999999974332 112222333211 1235567899999999999864
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.45 E-value=4e-06 Score=75.45 Aligned_cols=184 Identities=21% Similarity=0.257 Sum_probs=86.7
Q ss_pred eeEEEEeecCCCCC-----------hhhHHHHhhc-----CCCCeEEccccccccccchhhHH---HHHHhhhhhhcCCc
Q 019979 137 ITFAVAGDLGQTGW-----------TKSTLDHIGQ-----CKYDVHLLPGDLSYADYMQHRWD---TFGELVQPLASARP 197 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-----------~~~~~~~i~~-----~~~d~vl~~GDl~~~~~~~~~~~---~~~~~~~~l~~~~P 197 (333)
++|+..+|+|..-. ....++++++ ...-+++.+||+..... ...+. ...+.+..+. .-
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~-~~~~~~g~~~~~~~n~~g--~D 77 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVP-ESDLQDAEPDFRGMNLVG--YD 77 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCch-hHHhcCcchHHHHHHhhC--Cc
Confidence 47889999986411 1234555543 23458999999984322 11111 1122333322 33
Q ss_pred eEEccCCCCCCCCCCccccccccccccccCc---C---CCC-CCCCceEEEEeCCEEEEEEeccCC---C--C----CC-
Q 019979 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E---ESG-SNSNLYYSFDVAGAHLIMLGSYAD---Y--D----EY- 260 (333)
Q Consensus 198 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~---~~~-~~~~~~ys~~~g~v~fi~lds~~~---~--~----~~- 260 (333)
..++||||+..... .+....+....|. | ..+ .....|..++.+++++-++.-... . . .+
T Consensus 78 -a~~~GNHEfD~G~~---~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~~~~ 153 (285)
T cd07405 78 -AMAVGNHEFDNPLE---VLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYFEGI 153 (285)
T ss_pred -EEeecccccccCHH---HHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCCcCCc
Confidence 34779999964322 1111111111111 0 001 112356667888866544432111 0 0 00
Q ss_pred --HHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 261 --SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 261 --~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
.+..+=+++.+++.+.++...+|+++|-....... .+........+.+.+...++|++|.||.|...
T Consensus 154 ~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~--~~~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 154 EFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGE--HGSNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred EEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCcc--ccccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 11111122222222213567799999988643221 11111111233333333589999999999864
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.3e-06 Score=89.01 Aligned_cols=184 Identities=16% Similarity=0.170 Sum_probs=94.3
Q ss_pred CCeeEEEEeecCCCCC----hhhHHHHhhcCCCCeEEc-cccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCC
Q 019979 135 FPITFAVAGDLGQTGW----TKSTLDHIGQCKYDVHLL-PGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~----~~~~~~~i~~~~~d~vl~-~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~ 209 (333)
..++|+.++|+|..-. ....++++++.+|+.+++ +||++..... ..+......++.+...-.-+.++||||+..
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~g~~~~~~ln~lg~d~~~~GNHEfd~ 737 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-SNLLKGLPVLKMMKEMGYDASTFGNHEFDW 737 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-hhhcCChHHHHHHhCcCCCEEEeccccccc
Confidence 4599999999995421 234566677778888766 9999864321 111111122222222223356999999954
Q ss_pred CCCccccccccccc--------------cccC-cC----CCCC---CCCceEEEEeCCEE--EEEEeccCC--C---C--
Q 019979 210 IPLIMDAFQSYNAR--------------WKMP-FE----ESGS---NSNLYYSFDVAGAH--LIMLGSYAD--Y---D-- 258 (333)
Q Consensus 210 ~~~~~~~~~~~~~~--------------~~~p-~~----~~~~---~~~~~ys~~~g~v~--fi~lds~~~--~---~-- 258 (333)
... .+..+.+. |..- .| ..+. .-..|..++.++++ ||.+-+... . .
T Consensus 738 g~~---~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p~~~ 814 (1163)
T PRK09419 738 GPD---VLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSPGNV 814 (1163)
T ss_pred ChH---HHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCCCCc
Confidence 321 11111100 1100 00 0010 11356667888855 455443210 0 0
Q ss_pred C---CHHHHHHHHHHhhccc-CCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC-CCcEEEecCccccc
Q 019979 259 E---YSDQYRWLKDDLSKVD-RKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (333)
Q Consensus 259 ~---~~~q~~WL~~~L~~~~-~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~ 329 (333)
. -.+..+.+++..++.+ .++...+|+++|......... ++ ....++.++. +||++|.||.|..-
T Consensus 815 ~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~-----~~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 815 KNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GE-----ITGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred CCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cc-----cHHHHHHHhCCCCCEEEeCCCCccc
Confidence 0 1122333444444433 136778999999886432111 11 1233444544 79999999999753
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.3e-07 Score=84.94 Aligned_cols=72 Identities=15% Similarity=0.196 Sum_probs=49.7
Q ss_pred eeEEEEeecCCCCCh-------------hhHHHHhhcCCCCeEEccccccccccchhh-HHHHHHhhhhhhc-CCceEEc
Q 019979 137 ITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQHR-WDTFGELVQPLAS-ARPWMVT 201 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~-~~~~~~~~~~l~~-~~P~~~~ 201 (333)
+||++++|+|.+... ..+++.+.+.+||+||++||+.+....... ...+.+++..+.. .+|++++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~~I 80 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLVVL 80 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 589999999986321 134455568899999999999976443221 1233445555543 4899999
Q ss_pred cCCCCCC
Q 019979 202 QGNHEKE 208 (333)
Q Consensus 202 ~GNHD~~ 208 (333)
+||||..
T Consensus 81 ~GNHD~~ 87 (407)
T PRK10966 81 AGNHDSV 87 (407)
T ss_pred cCCCCCh
Confidence 9999984
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.4e-05 Score=70.41 Aligned_cols=168 Identities=14% Similarity=0.149 Sum_probs=88.6
Q ss_pred eEEEEeecCCCCCh---hhHHHHhh-cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCc
Q 019979 138 TFAVAGDLGQTGWT---KSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (333)
Q Consensus 138 ~f~~~gD~~~~~~~---~~~~~~i~-~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~ 213 (333)
|++++||.=..... ...++.++ +.++||+|..||.+-.+.... ....+.+..+. +-++ +.|||++....
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~--~~~~~~L~~~G--~D~i-TlGNH~fD~ge-- 73 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGIT--PKIAKELLSAG--VDVI-TMGNHTWDKKE-- 73 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCC--HHHHHHHHhcC--CCEE-EecccccCcch--
Confidence 58899998322211 23444444 567999999999986432111 12222333322 4444 56999996431
Q ss_pred ccccccccccc---ccCcCC-CCCCCCceEEEEeCCEEEEEEeccCCCC--CCHHHHHHHHHHhhcccCCCCCeEEEEec
Q 019979 214 MDAFQSYNARW---KMPFEE-SGSNSNLYYSFDVAGAHLIMLGSYADYD--EYSDQYRWLKDDLSKVDRKKTPWLLVLLH 287 (333)
Q Consensus 214 ~~~~~~~~~~~---~~p~~~-~~~~~~~~ys~~~g~v~fi~lds~~~~~--~~~~q~~WL~~~L~~~~~~~~~~~iv~~H 287 (333)
...+.+.. -.|.+- ....+..|..++.+++++-+++-..... ....-++-+++.+++.+. +.+.+||.+|
T Consensus 74 ---l~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D~IIV~~H 149 (255)
T cd07382 74 ---ILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EADIIFVDFH 149 (255)
T ss_pred ---HHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCCEEEEEEC
Confidence 11121111 111111 1112345778888887766665431111 112223345556655543 5677999999
Q ss_pred cccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccc
Q 019979 288 VPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (333)
Q Consensus 288 ~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 328 (333)
.-.. .....+.. .-.-+||+++.||+|..
T Consensus 150 ~g~t-----------sEk~ala~-~ldg~VdvIvGtHTHv~ 178 (255)
T cd07382 150 AEAT-----------SEKIALGW-YLDGRVSAVVGTHTHVQ 178 (255)
T ss_pred CCCC-----------HHHHHHHH-hCCCCceEEEeCCCCcc
Confidence 7431 01122332 11336999999999974
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=9.9e-07 Score=71.19 Aligned_cols=114 Identities=17% Similarity=0.124 Sum_probs=72.6
Q ss_pred EEEeecCCCCChhhHHHHhh-----cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCcc
Q 019979 140 AVAGDLGQTGWTKSTLDHIG-----QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (333)
Q Consensus 140 ~~~gD~~~~~~~~~~~~~i~-----~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~ 214 (333)
+++||.+.. ..++++.++ +.+.|++|++||+.........|..+.. ......+|.|++-|||+
T Consensus 1 LV~G~~~G~--l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~--g~~~~pipTyf~ggn~~-------- 68 (150)
T cd07380 1 LVCGDVNGR--LKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKD--GSKKVPIPTYFLGGNNP-------- 68 (150)
T ss_pred CeeecCCcc--HHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhc--CCccCCCCEEEECCCCC--------
Confidence 467888643 344444442 5678999999999854443323333322 12233489999999996
Q ss_pred ccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCC
Q 019979 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (333)
Q Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (333)
+.-|+++|.|++...
T Consensus 69 -----------------------------------------------------------------~~DILlTh~wP~gi~ 83 (150)
T cd07380 69 -----------------------------------------------------------------GVDILLTSEWPKGIS 83 (150)
T ss_pred -----------------------------------------------------------------CCCEEECCCCchhhh
Confidence 125888888876542
Q ss_pred CCCC-----CCChhHHHHHHHHHHhCCCcEEEecCcc-cccc
Q 019979 295 EAHQ-----GEGDGMMAIMEPLLYAASVDLVLAGHVH-AYER 330 (333)
Q Consensus 295 ~~~~-----~~~~~~~~~l~~l~~~~~v~lvl~GH~H-~y~R 330 (333)
.... .........+.+++++.++.+.||||.| .|||
T Consensus 84 ~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer 125 (150)
T cd07380 84 KLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYER 125 (150)
T ss_pred hhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEee
Confidence 1110 0011234677888999999999999999 6777
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.37 E-value=5e-07 Score=76.96 Aligned_cols=68 Identities=18% Similarity=0.084 Sum_probs=43.3
Q ss_pred EEeecCCCCChh----hHHHHhhcC--CCCeEEccccccccccchhhHHHH----HHhhhhhhcC-CceEEccCCCCCC
Q 019979 141 VAGDLGQTGWTK----STLDHIGQC--KYDVHLLPGDLSYADYMQHRWDTF----GELVQPLASA-RPWMVTQGNHEKE 208 (333)
Q Consensus 141 ~~gD~~~~~~~~----~~~~~i~~~--~~d~vl~~GDl~~~~~~~~~~~~~----~~~~~~l~~~-~P~~~~~GNHD~~ 208 (333)
+|||+|.+.... -.++-+... +.|.+.++||+++.=-....|... ...+..+.++ +|+|+++||||+-
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~Dfl 80 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNHDFL 80 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCchHHH
Confidence 689999884432 233444433 559999999998632222344433 2334444444 9999999999973
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.4e-05 Score=70.10 Aligned_cols=180 Identities=18% Similarity=0.226 Sum_probs=88.2
Q ss_pred CCeeEEEEeecCCCCC--------------hhhHHHHhh----cCCCC-eEEccccccccccch--h--hHHHHHHhhhh
Q 019979 135 FPITFAVAGDLGQTGW--------------TKSTLDHIG----QCKYD-VHLLPGDLSYADYMQ--H--RWDTFGELVQP 191 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~--------------~~~~~~~i~----~~~~d-~vl~~GDl~~~~~~~--~--~~~~~~~~~~~ 191 (333)
.+++|+..+|+|..-. ..++++.++ +.+++ +++.+||........ . .+....+.+..
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~ 83 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRM 83 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHh
Confidence 5689999999985311 022333332 33555 677899998643321 1 22222333333
Q ss_pred hhcCCceEEccCCCCCCCCCCccccccccccccccCc---C-----C--CC-CCCCceEEEEeC-CEE--EEEEeccCC-
Q 019979 192 LASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E-----E--SG-SNSNLYYSFDVA-GAH--LIMLGSYAD- 256 (333)
Q Consensus 192 l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~-----~--~~-~~~~~~ys~~~g-~v~--fi~lds~~~- 256 (333)
+. -=..++||||+......-..+..+.+....|. | + .. .....|..++.+ +++ +|.+-+...
T Consensus 84 mg---yDa~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~~ 160 (282)
T cd07407 84 MP---YDLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFKG 160 (282)
T ss_pred cC---CcEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEeccccc
Confidence 22 22458999999533210011111111111111 0 0 00 112345666776 655 555543211
Q ss_pred ------CCCCHHHH--HHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC-CCc-EEEecCcc
Q 019979 257 ------YDEYSDQY--RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVD-LVLAGHVH 326 (333)
Q Consensus 257 ------~~~~~~q~--~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~-lvl~GH~H 326 (333)
+....+.. +|+.+.|++ ++...+|+++|....... . ..+....+.++. ++| ++|.||.|
T Consensus 161 ~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~~la~~~~~id~~Ii~GHsH 229 (282)
T cd07407 161 AANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHDAIRKIFPDTPIQFLGGHSH 229 (282)
T ss_pred CCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHHHHHHhCCCCCEEEEeCCcc
Confidence 01111222 487777764 256779999998864321 0 111122333444 577 79999999
Q ss_pred cc
Q 019979 327 AY 328 (333)
Q Consensus 327 ~y 328 (333)
..
T Consensus 230 ~~ 231 (282)
T cd07407 230 VR 231 (282)
T ss_pred cc
Confidence 63
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=6e-06 Score=68.13 Aligned_cols=63 Identities=19% Similarity=0.153 Sum_probs=44.2
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
.+++++||+|.... .....+.....++|+|||+||.+..... ..+ ... + ..++++|.||.|..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~-~~l---~~~---~--~~~i~~V~GN~D~~ 65 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL-DAL---EGG---L--AAKLIAVRGNCDGE 65 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch-HHh---hcc---c--ccceEEEEccCCCc
Confidence 58999999998763 2344455567899999999999864331 111 110 1 37899999999994
|
|
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.8e-05 Score=66.69 Aligned_cols=170 Identities=13% Similarity=0.147 Sum_probs=93.0
Q ss_pred eeEEEEeecCCCCChh----hHHHHhh-cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCC
Q 019979 137 ITFAVAGDLGQTGWTK----STLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIP 211 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~~----~~~~~i~-~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~ 211 (333)
.|++++||.= +...+ ..+..++ +.++||+|..||.+-.+-. -. ....+.+... .+-++.+ |||++....
T Consensus 1 m~ilfiGDi~-G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~G-i~-~~~~~~L~~~--GvDviT~-GNH~~Dkge 74 (266)
T TIGR00282 1 IKFLFIGDVY-GKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKG-LT-LKIYEFLKQS--GVNYITM-GNHTWFQKL 74 (266)
T ss_pred CeEEEEEecC-CHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCC-CC-HHHHHHHHhc--CCCEEEc-cchhccCcH
Confidence 4799999983 32223 3444444 5678999999999854311 11 1112222222 2566655 999996432
Q ss_pred Cc--cccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccC-CCC-C--CHHHHHHHHHHhhcccCCCCCeEEEE
Q 019979 212 LI--MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA-DYD-E--YSDQYRWLKDDLSKVDRKKTPWLLVL 285 (333)
Q Consensus 212 ~~--~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~-~~~-~--~~~q~~WL~~~L~~~~~~~~~~~iv~ 285 (333)
.. -+.........+.|. +..+..+..++.++.++-+++-.. .+. . ...-++-+++.+++.+. +++.+||.
T Consensus 75 ~~~~i~~~~~~lrpanyp~---~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk~-~~d~IIVd 150 (266)
T TIGR00282 75 ILDVVINQKDLVRPLNFDT---SFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLKK-DCDLIFVD 150 (266)
T ss_pred HHHHHhccccccccCCCCC---CCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhhc-CCCEEEEE
Confidence 10 000111111112222 122355677788887777766521 111 1 11122334555555433 46689999
Q ss_pred eccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccc
Q 019979 286 LHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (333)
Q Consensus 286 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 328 (333)
+|.-.- ..+.....+-+.+|++|+.-|.|.-
T Consensus 151 ~Haeat------------sEK~a~~~~ldg~vsaVvGtHtHV~ 181 (266)
T TIGR00282 151 FHAETT------------SEKNAFGMAFDGYVTAVVGTHTHVP 181 (266)
T ss_pred eCCCCH------------HHHHHHHHHhCCCccEEEeCCCCCC
Confidence 996421 1245566777889999999999964
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.6e-06 Score=71.49 Aligned_cols=70 Identities=21% Similarity=0.216 Sum_probs=46.0
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccch-----hhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQ-----HRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~-----~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
+|++++||+|.... .+++++.+.+.++|.|+++||+++.+... ...+...+.++.+ ..+++.+.||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCceEEEccCCcch
Confidence 47999999995532 13455666678999999999998643210 0122233333332 25899999999973
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.21 E-value=3e-05 Score=76.39 Aligned_cols=186 Identities=20% Similarity=0.271 Sum_probs=87.9
Q ss_pred CCCeeEEEEeecCCCCC-------h----hhHHHHhhc-----CCCCeEEccccccccccchhhHH---HHHHhhhhhhc
Q 019979 134 QFPITFAVAGDLGQTGW-------T----KSTLDHIGQ-----CKYDVHLLPGDLSYADYMQHRWD---TFGELVQPLAS 194 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-------~----~~~~~~i~~-----~~~d~vl~~GDl~~~~~~~~~~~---~~~~~~~~l~~ 194 (333)
...++|+.++|+|..-. . ...++++++ ...-++|.+||+..... ...+. ...+.+..+.
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~-~s~~~~g~~~i~~mN~~g- 109 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVP-ESDLQDAEPDFRGMNLIG- 109 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceE-hhhhcCCchhHHHHhcCC-
Confidence 45789999999986421 1 233444432 23457999999975322 11111 1122222222
Q ss_pred CCceEEccCCCCCCCCCCccccccccccccccCc---C----CCC-CCCCceEEEEeCCEEEEEEe--ccCC--CCC---
Q 019979 195 ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESG-SNSNLYYSFDVAGAHLIMLG--SYAD--YDE--- 259 (333)
Q Consensus 195 ~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~~-~~~~~~ys~~~g~v~fi~ld--s~~~--~~~--- 259 (333)
.- ..++||||+..... .+.........|. | ..+ ..-..|..++.+++++-++. +... +..
T Consensus 110 -~D-a~tlGNHEFD~G~~---~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~~ 184 (551)
T PRK09558 110 -YD-AMAVGNHEFDNPLS---VLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPEY 184 (551)
T ss_pred -CC-EEcccccccCcCHH---HHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEeccccccccCCCC
Confidence 33 45779999964321 1111111111121 0 001 11245666788886554443 3110 000
Q ss_pred -----CHHHHHHHHHHhhcccC-CCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccc
Q 019979 260 -----YSDQYRWLKDDLSKVDR-KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (333)
Q Consensus 260 -----~~~q~~WL~~~L~~~~~-~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 328 (333)
..+..+-+++..++.+. .+...+|+++|......... .........+.+-+...+||++|.||.|..
T Consensus 185 ~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~--~~~~~~d~~la~~~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 185 FTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEH--GSNAPGDVEMARSLPAGGLDMIVGGHSQDP 257 (551)
T ss_pred cCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCcc--CCCCccHHHHHHhCCccCceEEEeCCCCcc
Confidence 01112223333333321 36678999999887432111 110001122222222237999999999974
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.5e-05 Score=76.37 Aligned_cols=183 Identities=18% Similarity=0.184 Sum_probs=96.9
Q ss_pred CCCeeEEEEeecCCCCC------------h----hhHHHHhhcC-CCCeEEccccccccccchhh---HHHHHHhhhhhh
Q 019979 134 QFPITFAVAGDLGQTGW------------T----KSTLDHIGQC-KYDVHLLPGDLSYADYMQHR---WDTFGELVQPLA 193 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~------------~----~~~~~~i~~~-~~d~vl~~GDl~~~~~~~~~---~~~~~~~~~~l~ 193 (333)
...++|+..+|+|..-. . ...++++++. +..++|.+||+......... .....+.+..+.
T Consensus 24 ~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~ 103 (517)
T COG0737 24 TVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG 103 (517)
T ss_pred ceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC
Confidence 56799999999986432 1 2244455443 34679999999975443222 122223333332
Q ss_pred cCCceEEccCCCCCCCCCCccccccccccccccCc---C---C---CCCCCCceEEEEeCCEE--EEEEeccC--CC---
Q 019979 194 SARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E---E---SGSNSNLYYSFDVAGAH--LIMLGSYA--DY--- 257 (333)
Q Consensus 194 ~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~---~---~~~~~~~~ys~~~g~v~--fi~lds~~--~~--- 257 (333)
.=..++||||+..... ....+.+....|. | . .....+.|.-++.++++ +|.+.+.. .+
T Consensus 104 ---yDa~tiGNHEFd~g~~---~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~~~~ 177 (517)
T COG0737 104 ---YDAMTLGNHEFDYGLE---ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTWEKP 177 (517)
T ss_pred ---CcEEeecccccccCHH---HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccccccc
Confidence 2355899999964321 1222222222221 0 0 11123678889999854 55555311 11
Q ss_pred C-----CCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccc
Q 019979 258 D-----EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (333)
Q Consensus 258 ~-----~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 328 (333)
+ .-.+..+++++.+.+.+.+...-+|+++|-+............. .... .. .++|+++.||.|.+
T Consensus 178 ~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~-~~~~----~~-~~iD~i~~GH~H~~ 247 (517)
T COG0737 178 NAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPG-DVDV----AV-PGIDLIIGGHSHTV 247 (517)
T ss_pred cccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccccc-cccc----cc-cCcceEeccCCccc
Confidence 1 01345566666666655433677999999987543221110000 0000 00 44999999999964
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=98.11 E-value=6.4e-05 Score=73.90 Aligned_cols=156 Identities=13% Similarity=0.144 Sum_probs=74.2
Q ss_pred HHHHhhcCCC-CeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCccccccccccccccCc---C
Q 019979 154 TLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E 229 (333)
Q Consensus 154 ~~~~i~~~~~-d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~ 229 (333)
.++++++..+ -+++.+||+...... ..+..-...++-+..--.=..++||||+..... .+..+.+....|. |
T Consensus 40 ~i~~~r~~~~n~l~ldaGD~~~gs~~-~~~~~g~~~i~~~N~~g~Da~~lGNHEFd~G~~---~l~~~~~~~~fp~l~aN 115 (550)
T TIGR01530 40 EINKLRAESKNALVLHAGDAIIGTLY-FTLFGGRADAALMNAAGFDFFTLGNHEFDAGNE---GLKEFLEPLEIPVLSAN 115 (550)
T ss_pred HHHHHHhhCCCeEEEECCCCCCCccc-hhhcCCHHHHHHHhccCCCEEEeccccccCCHH---HHHHHHHhCCCCEEEEe
Confidence 4455554444 578899999854321 111110112222222223456899999964321 1222222111221 0
Q ss_pred ---CCC----CCCCceEEEEeCC--EEEEEEeccCC-C---CCC-----HHHHHHHHHHhhcccCCCCCeEEEEeccccc
Q 019979 230 ---ESG----SNSNLYYSFDVAG--AHLIMLGSYAD-Y---DEY-----SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY 291 (333)
Q Consensus 230 ---~~~----~~~~~~ys~~~g~--v~fi~lds~~~-~---~~~-----~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~ 291 (333)
... ..-..|..++.++ +-||.+.+... . ... .+..+=+++..++.++++...+|+++|....
T Consensus 116 v~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~ 195 (550)
T TIGR01530 116 VIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGFE 195 (550)
T ss_pred eecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCcH
Confidence 000 0124566678887 55666654211 0 010 1111222222222222356779999997632
Q ss_pred cCCCCCCCCChhHHHHHHHHHHhC-CCcEEEecCcccc
Q 019979 292 NSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAY 328 (333)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 328 (333)
. + ..+.++. +||++|+||.|.+
T Consensus 196 ~---------d------~~la~~~~~iD~IigGHsH~~ 218 (550)
T TIGR01530 196 K---------N------CEIAQKINDIDVIVSGDSHYL 218 (550)
T ss_pred H---------H------HHHHhcCCCCCEEEeCCCCcc
Confidence 1 0 1233333 8999999999985
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.09 E-value=5e-06 Score=69.08 Aligned_cols=52 Identities=17% Similarity=0.249 Sum_probs=34.2
Q ss_pred HHhhcCCCCeEEccccccccccc--hhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 156 DHIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 156 ~~i~~~~~d~vl~~GDl~~~~~~--~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
+.+.+.+||.++++||+++.... ...+.... ........+|++.++||||..
T Consensus 35 ~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 35 RLIEEYGPERLIILGDLKHSFGGLSRQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHhcCCCEEEEeCcccccccccCHHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 34457899999999999975432 11222211 223334458999999999984
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=98.02 E-value=4.9e-05 Score=69.25 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=25.0
Q ss_pred CCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC-CCcEEEecCcccc
Q 019979 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAY 328 (333)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 328 (333)
+...+|+++|..-+. . . ..+.++. +||++|.||.|.+
T Consensus 207 gvD~II~LsH~g~~~---------~--d---~~lA~~v~gIDvIigGHsH~~ 244 (313)
T cd08162 207 GINKIILLSHLQQIS---------I--E---QALAALLSGVDVIIAGGSNTL 244 (313)
T ss_pred CCCEEEEEecccccc---------h--H---HHHHhcCCCCCEEEeCCCCcc
Confidence 566799999984111 0 0 1234443 8999999999986
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.8e-05 Score=68.51 Aligned_cols=70 Identities=19% Similarity=0.235 Sum_probs=48.4
Q ss_pred eeEEEEeecCCCCCh--------------hhHHHHh----hcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCce
Q 019979 137 ITFAVAGDLGQTGWT--------------KSTLDHI----GQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPW 198 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~~~~i----~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~ 198 (333)
-+.++++|+|.+... .++++.+ .+.+||.+|++||+.........+..+.+.++.+. .++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~--~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF--RDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC--CcE
Confidence 457899999986421 1334433 46789999999999965443245555555555543 589
Q ss_pred EEccCCCCCC
Q 019979 199 MVTQGNHEKE 208 (333)
Q Consensus 199 ~~~~GNHD~~ 208 (333)
+.++||||..
T Consensus 93 ~~V~GNHD~~ 102 (225)
T TIGR00024 93 ILIRGNHDAL 102 (225)
T ss_pred EEECCCCCCc
Confidence 9999999974
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00014 Score=67.97 Aligned_cols=76 Identities=12% Similarity=0.251 Sum_probs=55.4
Q ss_pred CCCeeEEEEeecCCCCCh------hhHHHHhh-----cCCCCeEEccccccccccc-------------hhhHHHHHHhh
Q 019979 134 QFPITFAVAGDLGQTGWT------KSTLDHIG-----QCKYDVHLLPGDLSYADYM-------------QHRWDTFGELV 189 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~------~~~~~~i~-----~~~~d~vl~~GDl~~~~~~-------------~~~~~~~~~~~ 189 (333)
..++++++++|.|.+... ...++.+. ..+...++.+||+++.-+. .++++.+.+++
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 577899999999986432 23444443 3456899999999974322 34566777777
Q ss_pred hhhhcCCceEEccCCCCCCC
Q 019979 190 QPLASARPWMVTQGNHEKES 209 (333)
Q Consensus 190 ~~l~~~~P~~~~~GNHD~~~ 209 (333)
..+...+-++..|||||...
T Consensus 303 ~~vp~~I~v~i~PGnhDa~r 322 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAVR 322 (481)
T ss_pred hhCCCCceEEEecCCCCccc
Confidence 77777788999999999953
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.90 E-value=2.4e-05 Score=68.75 Aligned_cols=69 Identities=14% Similarity=0.204 Sum_probs=46.7
Q ss_pred EEEeecCCCCCh------hhHHHHhhcC-----CCCeEEccccccccccc-------------hhhHHHHHHhhhhhhcC
Q 019979 140 AVAGDLGQTGWT------KSTLDHIGQC-----KYDVHLLPGDLSYADYM-------------QHRWDTFGELVQPLASA 195 (333)
Q Consensus 140 ~~~gD~~~~~~~------~~~~~~i~~~-----~~d~vl~~GDl~~~~~~-------------~~~~~~~~~~~~~l~~~ 195 (333)
+++||+|.+... +.+++.+... ++|.++++||+++.... ...+..+.+.++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 689999975431 2233444332 57999999999975210 11234455677777767
Q ss_pred CceEEccCCCCCC
Q 019979 196 RPWMVTQGNHEKE 208 (333)
Q Consensus 196 ~P~~~~~GNHD~~ 208 (333)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999985
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.2e-05 Score=68.44 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=43.1
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhcC--CCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQC--KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~~--~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~ 207 (333)
+++++||+|.... ..++++.+... ..|.++++||+++.+... -+.+..+++.+....++++++||||.
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s--~~v~~~l~~~~~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRS--KDVVNYIFDLMSNDDNVVTLLGNHDD 72 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCCh--HHHHHHHHHHhhcCCCeEEEECCcHH
Confidence 6899999995421 23455555432 359999999999865431 12222222222233579999999997
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00016 Score=77.21 Aligned_cols=48 Identities=19% Similarity=0.230 Sum_probs=30.7
Q ss_pred CCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC-CCcEEEecCccccc
Q 019979 277 KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (333)
Q Consensus 277 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~ 329 (333)
+++..+|+++|.......... +. .....++.++. +||+++.||.|..-
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~-~~----en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSS-GA----EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCC-Cc----chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 467789999998864322111 11 12334455453 89999999999864
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=97.85 E-value=3.7e-05 Score=74.53 Aligned_cols=76 Identities=12% Similarity=0.218 Sum_probs=53.5
Q ss_pred CCCeeEEEEeecCCCCCh------hhHHHHhh---------cCCCCeEEccccccccccc-------------hhhHHHH
Q 019979 134 QFPITFAVAGDLGQTGWT------KSTLDHIG---------QCKYDVHLLPGDLSYADYM-------------QHRWDTF 185 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~------~~~~~~i~---------~~~~d~vl~~GDl~~~~~~-------------~~~~~~~ 185 (333)
..+.+++++||+|.+... +..++.+. ..+++.+|++||+++..+. ...++.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 567899999999976531 23444454 5679999999999974221 1123445
Q ss_pred HHhhhhhhcCCceEEccCCCCCCC
Q 019979 186 GELVQPLASARPWMVTQGNHEKES 209 (333)
Q Consensus 186 ~~~~~~l~~~~P~~~~~GNHD~~~ 209 (333)
.+.+..+...+|+++++||||...
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcchh
Confidence 566777767789999999999853
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00039 Score=61.19 Aligned_cols=133 Identities=14% Similarity=0.187 Sum_probs=75.2
Q ss_pred EEEEeecCCCCCh------hhHHHHhh-----------cCCCCeEEccccccccccc-------------------hhhH
Q 019979 139 FAVAGDLGQTGWT------KSTLDHIG-----------QCKYDVHLLPGDLSYADYM-------------------QHRW 182 (333)
Q Consensus 139 f~~~gD~~~~~~~------~~~~~~i~-----------~~~~d~vl~~GDl~~~~~~-------------------~~~~ 182 (333)
++++||++.+... +.+++.+. ..++.-+|++||.+...+. ....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 6788998876542 12223332 2345579999999874332 2234
Q ss_pred HHHHHhhhhhhcCCceEEccCCCCCCCCCCccccccccccccccCcC-CCCCCCCceEEEEeCCEEEEEEeccC-----C
Q 019979 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE-ESGSNSNLYYSFDVAGAHLIMLGSYA-----D 256 (333)
Q Consensus 183 ~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ys~~~g~v~fi~lds~~-----~ 256 (333)
+.+..++..+.+.+|+...|||||-.+...-+..+.. ..|..... ..-..-..-|.|++++++|++..... .
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~--~lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~Di~k 159 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHR--CLFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVDDILK 159 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCH--HHhhcccccCCcEEeCCCeEEEECCEEEEEECCCCHHHHHH
Confidence 4555677788888999999999999643221122111 11110000 00001133456999999999987632 1
Q ss_pred CCCCHHHHHHHHHHhhc
Q 019979 257 YDEYSDQYRWLKDDLSK 273 (333)
Q Consensus 257 ~~~~~~q~~WL~~~L~~ 273 (333)
+...++-++.|+..|+.
T Consensus 160 y~~~~~~l~~me~~L~w 176 (257)
T cd07387 160 YSSLESRLDILERTLKW 176 (257)
T ss_pred hCCCCCHHHHHHHHHHh
Confidence 22334446677777665
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.74 E-value=4.7e-05 Score=67.87 Aligned_cols=65 Identities=22% Similarity=0.163 Sum_probs=43.6
Q ss_pred eEEEEeecCCCCC-hhhHHHHhh-cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~-~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~ 207 (333)
+++++||+|.... ..++++.+. ..+.|.++++||+++.+... ....+.+..+ ..+++.+.||||.
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s---~~vl~~l~~l--~~~~~~VlGNHD~ 68 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDS---LEVLRFVKSL--GDSAVTVLGNHDL 68 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCH---HHHHHHHHhc--CCCeEEEecChhH
Confidence 5789999986532 244556554 35789999999999866532 1223333333 2468899999998
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.73 E-value=5.3e-05 Score=66.24 Aligned_cols=67 Identities=21% Similarity=0.227 Sum_probs=44.1
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhc----------CCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQ----------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHE 206 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~----------~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD 206 (333)
+++++||+|.... ..++++.+.. .+.|.++++||+++.+.. -....+.+..+...-.++.+.||||
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~---s~evl~~l~~l~~~~~~~~v~GNHE 78 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPD---SPEVLRLVMSMVAAGAALCVPGNHD 78 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCC---HHHHHHHHHHHhhCCcEEEEECCcH
Confidence 6899999986532 2455666521 136899999999986543 2223344444433346789999999
Q ss_pred C
Q 019979 207 K 207 (333)
Q Consensus 207 ~ 207 (333)
.
T Consensus 79 ~ 79 (234)
T cd07423 79 N 79 (234)
T ss_pred H
Confidence 7
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00077 Score=68.52 Aligned_cols=184 Identities=18% Similarity=0.103 Sum_probs=88.5
Q ss_pred CCCeeEEEEeecCCCCC-----------------hhhHHHHhhcCCC-CeEEccccccccccchhh---------HH--H
Q 019979 134 QFPITFAVAGDLGQTGW-----------------TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHR---------WD--T 184 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-----------------~~~~~~~i~~~~~-d~vl~~GDl~~~~~~~~~---------~~--~ 184 (333)
.-.++|+..+|+|..-. ....++++++..+ -++|.+||++........ .+ -
T Consensus 113 ~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P 192 (814)
T PRK11907 113 TVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHP 192 (814)
T ss_pred ceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchH
Confidence 34699999999986410 0224555554444 478999999864332111 00 1
Q ss_pred HHHhhhhhhcCCceEEccCCCCCCCCCCccccccccccccccCc---C----CCC-CCCCceEEEEe-----CC------
Q 019979 185 FGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESG-SNSNLYYSFDV-----AG------ 245 (333)
Q Consensus 185 ~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~~-~~~~~~ys~~~-----g~------ 245 (333)
..+.+..+. -=..++||||+..... .+..+.+....|. | ..+ ..-..|--++. ++
T Consensus 193 ~i~amN~LG---yDA~tLGNHEFDyG~d---~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~~G~~~~vK 266 (814)
T PRK11907 193 MYAALEALG---FDAGTLGNHEFNYGLD---YLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDTEGKKVTLN 266 (814)
T ss_pred HHHHHhccC---CCEEEechhhcccCHH---HHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEecCCCcccceE
Confidence 122232222 2245899999964322 1111111111221 0 000 01133444443 33
Q ss_pred EEEEEEeccC--CCCC--------CHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC
Q 019979 246 AHLIMLGSYA--DYDE--------YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA 315 (333)
Q Consensus 246 v~fi~lds~~--~~~~--------~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~ 315 (333)
+-||++-+.. .++. -.+-.+-+++...+.+.++++.+|++.|..+.........++. -..+.+--
T Consensus 267 IGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En~-----~~~LA~v~ 341 (814)
T PRK11907 267 IGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEENV-----GYQIASLS 341 (814)
T ss_pred EEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccch-----hhHHhcCC
Confidence 4556554311 1110 1222333444444443346778999999886432111111111 11222234
Q ss_pred CCcEEEecCcccc
Q 019979 316 SVDLVLAGHVHAY 328 (333)
Q Consensus 316 ~v~lvl~GH~H~y 328 (333)
+||+++.||.|..
T Consensus 342 GIDaIvgGHsH~~ 354 (814)
T PRK11907 342 GVDAVVTGHSHAE 354 (814)
T ss_pred CCCEEEECCCCCc
Confidence 8999999999985
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.70 E-value=5.3e-05 Score=64.93 Aligned_cols=64 Identities=23% Similarity=0.171 Sum_probs=41.7
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhc-CCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~-~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
|++++||+|.... ..++++.+.. .++|.++++||+++.+... . +.++.+.. .+++.+.||||..
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~---~---~~~~~l~~-~~~~~v~GNhe~~ 67 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPES---L---ACLELLLE-PWFHAVRGNHEQM 67 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH---H---HHHHHHhc-CCEEEeECCChHH
Confidence 6899999995432 1234444432 4689999999999865432 1 22333322 4688999999974
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00094 Score=67.75 Aligned_cols=47 Identities=26% Similarity=0.203 Sum_probs=28.0
Q ss_pred CCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC-CCcEEEecCccccc
Q 019979 277 KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (333)
Q Consensus 277 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~ 329 (333)
+++..+|+++|..+...... ... +.....+++. +||++|.||.|..-
T Consensus 243 ~GaDvIIaLsH~G~~~d~~~---~~~---ena~~~l~~v~gID~IlgGHsH~~~ 290 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGYN---VGM---ENASYYLTEVPGVDAVLMGHSHTEV 290 (780)
T ss_pred cCCCEEEEEeccCccccccc---ccc---hhhhHHHhcCCCCCEEEECCCCCcc
Confidence 35778999999876432110 000 1111113444 89999999999753
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.64 E-value=7.8e-05 Score=61.66 Aligned_cols=63 Identities=17% Similarity=0.145 Sum_probs=39.6
Q ss_pred EEEeecCCCCCh----------------hhHHHHhhc--CCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEc
Q 019979 140 AVAGDLGQTGWT----------------KSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (333)
Q Consensus 140 ~~~gD~~~~~~~----------------~~~~~~i~~--~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~ 201 (333)
.+++|+|.+... +.+++.+.+ .++|.|+++||+++...... + .+.++.+. .|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~-~---~~~l~~~~--~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGT-E---LELLSRLN--GRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHH-H---HHHHHhCC--CCeEEE
Confidence 367888876431 223444433 36899999999997544221 1 22333332 689999
Q ss_pred cCCCCCC
Q 019979 202 QGNHEKE 208 (333)
Q Consensus 202 ~GNHD~~ 208 (333)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999984
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=9e-05 Score=64.00 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=42.5
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhh-cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~-~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~ 207 (333)
=|++++||+|.... ..++++.+. ..+.|.++++||+++.+.... +.++.+.. ..++.+.||||.
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~------~~l~~l~~-~~~~~v~GNHE~ 80 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL------NVLRLLNQ-PWFISVKGNHEA 80 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH------HHHHHHhh-CCcEEEECchHH
Confidence 38999999986532 234555554 457899999999998665321 12222222 346789999997
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00012 Score=63.21 Aligned_cols=73 Identities=19% Similarity=0.084 Sum_probs=46.0
Q ss_pred EECCCCCCCeeEEEEeecCCCCC-hhhHHHHhhcC-CCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCC
Q 019979 128 FKTPPAQFPITFAVAGDLGQTGW-TKSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNH 205 (333)
Q Consensus 128 F~t~p~~~~~~f~~~gD~~~~~~-~~~~~~~i~~~-~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNH 205 (333)
|+.-+.+.--|+.++||+|.... ..++++.+... +.|-++++||+++.+.... +.++-+.. ..+..+.|||
T Consensus 8 ~~~~~~~~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~------~vl~~l~~-~~~~~v~GNH 80 (218)
T PRK11439 8 YQRIAGHQWRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSL------RCLQLLEE-HWVRAVRGNH 80 (218)
T ss_pred eecccCCCCCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHH------HHHHHHHc-CCceEeeCch
Confidence 33333333338999999986532 24566666533 6899999999998665321 12222222 2467899999
Q ss_pred CC
Q 019979 206 EK 207 (333)
Q Consensus 206 D~ 207 (333)
|.
T Consensus 81 E~ 82 (218)
T PRK11439 81 EQ 82 (218)
T ss_pred HH
Confidence 96
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00012 Score=64.39 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=42.3
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhc---------CCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQ---------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~---------~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~ 207 (333)
|+.++||+|.... ..++++.+.. .+-|.++++||+++.+... -+ ..+.+..+...-.++++.||||.
T Consensus 2 ~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S--~~-vl~~~~~~~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 2 KYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHS--LR-MIEIVWELVEKKAAYYVPGNHCN 78 (245)
T ss_pred ceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcCh--HH-HHHHHHHHhhCCCEEEEeCccHH
Confidence 6899999986432 2344555431 1347899999999876531 11 22233333333578999999996
|
|
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00033 Score=62.84 Aligned_cols=173 Identities=19% Similarity=0.187 Sum_probs=94.1
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhhc---CCCCeEEccccccccccc--------hhhHHH---HHHhh-hhhhcCCceEE
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIGQ---CKYDVHLLPGDLSYADYM--------QHRWDT---FGELV-QPLASARPWMV 200 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~---~~~d~vl~~GDl~~~~~~--------~~~~~~---~~~~~-~~l~~~~P~~~ 200 (333)
+|+++-|++|..-. --+++..+.+ .++|++|++||+---.+. ...+.. |.++. ..+.+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 47899999985422 1234444443 489999999999421111 112222 22222 23445588899
Q ss_pred ccCCCCCCCCCCccccccccccccccCcCCCCCCCCceE-----EEEeCCEEEEEEec---cCCCCCC--------H---
Q 019979 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYY-----SFDVAGAHLIMLGS---YADYDEY--------S--- 261 (333)
Q Consensus 201 ~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y-----s~~~g~v~fi~lds---~~~~~~~--------~--- 261 (333)
+=||||..+. .. .+|..+- -..+.|| ...+||+|+-.|.. ..+|..+ .
T Consensus 81 IGGNHEAsny----------L~--eLpyGGw-VApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~sti 147 (456)
T KOG2863|consen 81 IGGNHEASNY----------LQ--ELPYGGW-VAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNSTI 147 (456)
T ss_pred ecCchHHHHH----------HH--hcccCce-eccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchhh
Confidence 9999998431 11 1222110 0123444 46789999999886 1122110 0
Q ss_pred ----HHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCC-----------------hhHHHHHHHHHHhCCCcEE
Q 019979 262 ----DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEG-----------------DGMMAIMEPLLYAASVDLV 320 (333)
Q Consensus 262 ----~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~-----------------~~~~~~l~~l~~~~~v~lv 320 (333)
--+..=...|++. +.|--|.++|.=+.+.. ..|+. .-....+.+||++.+...+
T Consensus 148 RsiYHvR~~dV~~Lkql---k~piDIfLSHDWP~GI~--~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~yW 222 (456)
T KOG2863|consen 148 RSIYHVRISDVAKLKQL---KHPIDIFLSHDWPRGIY--YYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQYW 222 (456)
T ss_pred hhhhhhhhhhhHHHHhh---cCcceEEeecCCCcchh--hcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcchh
Confidence 0011112234444 33446888886432211 12211 1123577889999999999
Q ss_pred EecCccc
Q 019979 321 LAGHVHA 327 (333)
Q Consensus 321 l~GH~H~ 327 (333)
|+.|.|+
T Consensus 223 fsAHLH~ 229 (456)
T KOG2863|consen 223 FSAHLHV 229 (456)
T ss_pred hhhhHhh
Confidence 9999996
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00016 Score=62.62 Aligned_cols=67 Identities=21% Similarity=0.215 Sum_probs=42.0
Q ss_pred EEEEeecCCCCC-hhhHHHHhhcC--------CCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 139 FAVAGDLGQTGW-TKSTLDHIGQC--------KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 139 f~~~gD~~~~~~-~~~~~~~i~~~--------~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
+.++||+|.... ..++++.+... ..|.++++||+++.+... ....+.+..+...-.++.+.||||..
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S---~~vl~~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEI---RELLEIVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCH---HHHHHHHHHhhcCCCEEEEEccCcHH
Confidence 368999986532 24455555321 468999999999876531 12223333333334688899999973
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0002 Score=63.65 Aligned_cols=67 Identities=12% Similarity=0.114 Sum_probs=41.6
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhc------CCCCeEEccccccccccchhhHHHHHHhhhhhhcC---CceEEccCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQ------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA---RPWMVTQGNHEK 207 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~------~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~---~P~~~~~GNHD~ 207 (333)
++.++||+|.... .+++++.+.. ...+.+|++||+++.+....+ ..+.+..+... ..++++.||||.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~e---Vld~L~~l~~~~~~~~vv~LrGNHE~ 79 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRK---VIDFLISLPEKHPKQRHVFLCGNHDF 79 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHH---HHHHHHHhhhcccccceEEEecCChH
Confidence 6889999986532 2445555532 235689999999987653222 22233333222 247889999995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0023 Score=64.04 Aligned_cols=56 Identities=16% Similarity=0.200 Sum_probs=31.3
Q ss_pred HHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHh-CCCcEEEecCcccc
Q 019979 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAY 328 (333)
Q Consensus 267 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 328 (333)
+++...+.+.+++..+|++.|............+ ..... +.+ -+||+++.||.|..
T Consensus 207 a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~~~ae-----n~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 207 ARKYVPEMKEKGADIVVAIPHSGISADPYKAMAE-----NSVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred HHHHHHHHHHcCCCEEEEEecCCcCCCCcccccc-----chhHH-HhcCCCCCEEEeCCCCcc
Confidence 3333333333357789999998763221100011 11112 344 38999999999975
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0031 Score=50.17 Aligned_cols=66 Identities=21% Similarity=0.179 Sum_probs=40.1
Q ss_pred eEEEEeecCCCCCh--------------hhHHHHhh-cCC-CCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEc
Q 019979 138 TFAVAGDLGQTGWT--------------KSTLDHIG-QCK-YDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (333)
Q Consensus 138 ~f~~~gD~~~~~~~--------------~~~~~~i~-~~~-~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~ 201 (333)
.+-++||+|.+... ..++...+ -.+ -|.+.++||++..... -..+...++.|...+ ..+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~---~~~a~~IlerLnGrk--hlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANR---ERAAGLILERLNGRK--HLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccch---hhHHHHHHHHcCCcE--EEe
Confidence 35678999876321 12333332 233 4789999999864432 223345566665443 779
Q ss_pred cCCCCCC
Q 019979 202 QGNHEKE 208 (333)
Q Consensus 202 ~GNHD~~ 208 (333)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999983
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0028 Score=63.34 Aligned_cols=45 Identities=24% Similarity=0.240 Sum_probs=27.6
Q ss_pred CCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC-CCcEEEecCcccc
Q 019979 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAY 328 (333)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 328 (333)
++..+|++.|.......... . . +.....+++. +||++++||.|..
T Consensus 195 gaDvII~LsH~G~~~d~~~~-~-~----en~~~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 195 GADIIVALAHSGISADPYQP-G-A----ENSAYYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred CCCEEEEEeccCcCCCcccc-c-c----chHHHHHhcCCCCCEEEcCCCCcc
Confidence 56779999998764321100 1 1 1111223443 8999999999984
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00026 Score=62.44 Aligned_cols=64 Identities=22% Similarity=0.140 Sum_probs=42.7
Q ss_pred EEEeecCCCCC-hhhHHHHhh-cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 140 AVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 140 ~~~gD~~~~~~-~~~~~~~i~-~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
.++||+|.... .+++++.+. ..+.|.++++||+++.+... .+..+.+..+. ..+..+.||||..
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s---~evl~~l~~l~--~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDS---LETLRFVKSLG--DSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCH---HHHHHHHHhcC--CCeEEEcCCchHH
Confidence 58999986532 245666664 34689999999999866532 12233333332 3678999999983
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00031 Score=60.85 Aligned_cols=65 Identities=23% Similarity=0.183 Sum_probs=42.0
Q ss_pred EEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhc-CCceEEccCCCCCC
Q 019979 141 VAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS-ARPWMVTQGNHEKE 208 (333)
Q Consensus 141 ~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~P~~~~~GNHD~~ 208 (333)
++||+|.... ..++++.+.....|.+|++||+++.+... ......+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~---~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDS---VEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCc---HHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 7899995432 13455555556789999999999865431 222223323221 34799999999984
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00019 Score=62.39 Aligned_cols=167 Identities=21% Similarity=0.275 Sum_probs=95.4
Q ss_pred CCCeEEccccccccccch-------hhHHHHH----HhhhhhhcCCceEEccCCCCCCCCCC------ccccccccccc-
Q 019979 162 KYDVHLLPGDLSYADYMQ-------HRWDTFG----ELVQPLASARPWMVTQGNHEKESIPL------IMDAFQSYNAR- 223 (333)
Q Consensus 162 ~~d~vl~~GDl~~~~~~~-------~~~~~~~----~~~~~l~~~~P~~~~~GNHD~~~~~~------~~~~~~~~~~~- 223 (333)
.|--++..||++++++.+ .++..+. .-..++.-.+|+|.-.||||..-..- +......|...
T Consensus 126 ~plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~ 205 (392)
T COG5555 126 CPLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENY 205 (392)
T ss_pred CceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhh
Confidence 344577788999876541 1111111 11222333489999999999953211 01111122211
Q ss_pred ------cccCcCC-CCCCCCceEEEEeCCEEEEEEeccCCCCC--CHHHHHHHHHHhhcccCCCCCeEEEEeccccc--c
Q 019979 224 ------WKMPFEE-SGSNSNLYYSFDVAGAHLIMLGSYADYDE--YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY--N 292 (333)
Q Consensus 224 ------~~~p~~~-~~~~~~~~ys~~~g~v~fi~lds~~~~~~--~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~--~ 292 (333)
|..|... .-..-...||++.|+++.+-+-....-.. ....+-||+.+|.....+..+ ++++-|..+- +
T Consensus 206 Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfs 284 (392)
T COG5555 206 HRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFS 284 (392)
T ss_pred cCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCcccee
Confidence 2222110 11123567999999998887776432111 134467999999887655555 8999997652 1
Q ss_pred CCCC--------CCCC------ChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 293 SNEA--------HQGE------GDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 293 ~~~~--------~~~~------~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
+... ..+. ....+..+...++-|+|...+.||.|.+.
T Consensus 285 teawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~ 335 (392)
T COG5555 285 TEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFN 335 (392)
T ss_pred ccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccc
Confidence 1110 0111 12357788888999999999999999653
|
|
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0023 Score=45.68 Aligned_cols=70 Identities=19% Similarity=0.289 Sum_probs=47.1
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
+|..+++...+.+++.|.|...... ..-.|+|....+.... .... .......++|+||+|++.|.+
T Consensus 2 ~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~------~~~~----~~~~~~~~~i~~L~p~t~Y~~ 71 (85)
T PF00041_consen 2 APENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDW------QEVT----VPGNETSYTITGLQPGTTYEF 71 (85)
T ss_dssp SSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSSEE------EEEE----EETTSSEEEEESCCTTSEEEE
T ss_pred cCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccceee------eeee----eeeeeeeeeeccCCCCCEEEE
Confidence 5888888888999999999998411 2336677655443200 0111 112233788999999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
+|..
T Consensus 72 ~v~a 75 (85)
T PF00041_consen 72 RVRA 75 (85)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00062 Score=60.39 Aligned_cols=65 Identities=22% Similarity=0.162 Sum_probs=42.9
Q ss_pred eEEEEeecCCCCC-hhhHHHHhh-cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~-~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~ 207 (333)
+..++||+|.... ..++++.+. ....|-++++||+++.+... ....+.+..+. ..+..+.||||.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~s---levL~~l~~l~--~~~~~VlGNHD~ 68 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGS---LEVLRYVKSLG--DAVRLVLGNHDL 68 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCH---HHHHHHHHhcC--CCeEEEEChhHH
Confidence 4678999986532 356777775 34679999999999876532 11223333332 235689999997
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0069 Score=53.04 Aligned_cols=59 Identities=22% Similarity=0.222 Sum_probs=37.9
Q ss_pred HHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 265 RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 265 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
+-+++.+++.++ +.+.+|++.|-..-.. .........+...+.+.++|+|+.||.|..+
T Consensus 162 ~~~~~~i~~lr~-~~D~vIv~~H~G~e~~-----~~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q 220 (239)
T cd07381 162 ERIAADIAEAKK-KADIVIVSLHWGVEYS-----YYPTPEQRELARALIDAGADLVIGHHPHVLQ 220 (239)
T ss_pred HHHHHHHHHHhh-cCCEEEEEecCcccCC-----CCCCHHHHHHHHHHHHCCCCEEEcCCCCcCC
Confidence 445556665544 4778999999654211 1111233455555666899999999999865
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0015 Score=56.24 Aligned_cols=71 Identities=20% Similarity=0.172 Sum_probs=49.1
Q ss_pred eeEEEEeecCCCCCh--------------h---hHHH-HhhcCCCCeEEccccccccccc--hhhHHHHHHhhhhhhcCC
Q 019979 137 ITFAVAGDLGQTGWT--------------K---STLD-HIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASAR 196 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~---~~~~-~i~~~~~d~vl~~GDl~~~~~~--~~~~~~~~~~~~~l~~~~ 196 (333)
-+.++++|+|.+... . ..++ -+...+|+-+|++||+-.+-+. ..+|+....+++.+...
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~- 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER- 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC-
Confidence 467899999986321 1 1233 3458899999999999765443 45566655555555433
Q ss_pred ceEEccCCCCCC
Q 019979 197 PWMVTQGNHEKE 208 (333)
Q Consensus 197 P~~~~~GNHD~~ 208 (333)
-++.+.||||-.
T Consensus 99 evi~i~GNHD~~ 110 (235)
T COG1407 99 EVIIIRGNHDNG 110 (235)
T ss_pred cEEEEeccCCCc
Confidence 599999999985
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.009 Score=52.33 Aligned_cols=58 Identities=19% Similarity=0.233 Sum_probs=36.5
Q ss_pred HHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccccc
Q 019979 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 267 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
+++.+++++. +..++|++.|-..-... .. ......+..-+.+.++|+|+.||.|..+.
T Consensus 162 i~~~i~~lr~-~~D~vIv~~H~G~e~~~----~p-~~~~~~~A~~l~~~G~DvIiG~H~H~~~~ 219 (239)
T smart00854 162 ILADIARARK-KADVVIVSLHWGVEYQY----EP-TDEQRELAHALIDAGADVVIGHHPHVLQP 219 (239)
T ss_pred HHHHHHHHhc-cCCEEEEEecCccccCC----CC-CHHHHHHHHHHHHcCCCEEEcCCCCcCCc
Confidence 4455555543 57889999997642211 11 12234455555557999999999998753
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.021 Score=49.08 Aligned_cols=171 Identities=15% Similarity=0.187 Sum_probs=94.3
Q ss_pred eeEEEEeecCCCCChhhHH----HHhh-cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCC
Q 019979 137 ITFAVAGDLGQTGWTKSTL----DHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIP 211 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~~~~~----~~i~-~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~ 211 (333)
+|++++||+= +...+.++ ..++ +.++||||..|-.+-. +..-.|+.+..+++. .+- +.+.|||=+....
T Consensus 1 mriLfiGDvv-Gk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~-G~Git~k~y~~l~~~---G~d-viT~GNH~wd~~e 74 (266)
T COG1692 1 MRILFIGDVV-GKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAG-GFGITEKIYKELLEA---GAD-VITLGNHTWDQKE 74 (266)
T ss_pred CeEEEEeccc-CcchHHHHHHHhHHHHHhhcCcEEEEcCccccC-CcCCCHHHHHHHHHh---CCC-EEecccccccchH
Confidence 4899999993 33333333 3333 6789999999999853 333345544444332 244 3489999885321
Q ss_pred CccccccccccccccCcCC-CCCCCCceEEEEeCCEEEEEEeccC--CCC-CCHHHHHHHHHHhhcccCCCCCeEEEEec
Q 019979 212 LIMDAFQSYNARWKMPFEE-SGSNSNLYYSFDVAGAHLIMLGSYA--DYD-EYSDQYRWLKDDLSKVDRKKTPWLLVLLH 287 (333)
Q Consensus 212 ~~~~~~~~~~~~~~~p~~~-~~~~~~~~ys~~~g~v~fi~lds~~--~~~-~~~~q~~WL~~~L~~~~~~~~~~~iv~~H 287 (333)
. ..+..-..++-.|.|- .+..+..|.-|...+..+.++|-.. ... .-..-..=+++.+.+.+. +++.+||-+|
T Consensus 75 i--~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~~-~~~~iiVDFH 151 (266)
T COG1692 75 I--LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIKL-GTDLIIVDFH 151 (266)
T ss_pred H--HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCcc-CCceEEEEcc
Confidence 1 1111111222234331 1234567788888887777776532 111 112334446667776654 5567899999
Q ss_pred cccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccc
Q 019979 288 VPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (333)
Q Consensus 288 ~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 328 (333)
.-..+. +.-.-++-+-.|.+|+.=|+|.-
T Consensus 152 AEtTSE------------K~a~g~yldGrvsavvGTHTHV~ 180 (266)
T COG1692 152 AETTSE------------KNAFGWYLDGRVSAVVGTHTHVP 180 (266)
T ss_pred ccchhh------------hhhhheEEcCeEEEEEeccCccc
Confidence 642210 01111233446889999999963
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.019 Score=49.91 Aligned_cols=167 Identities=16% Similarity=0.168 Sum_probs=79.1
Q ss_pred EEEeecCCCCChhh----HHHHhh-cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCcc
Q 019979 140 AVAGDLGQTGWTKS----TLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (333)
Q Consensus 140 ~~~gD~~~~~~~~~----~~~~i~-~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~ 214 (333)
+++||.= +...++ .+..++ +.++||||..|..+-.+.- -....+.+++ . ..+-+ .+.|||=+......
T Consensus 1 LfiGDIv-G~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~G-it~~~~~~L~-~--~GvDv-iT~GNH~wdkkei~- 73 (253)
T PF13277_consen 1 LFIGDIV-GKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGFG-ITPKIAEELF-K--AGVDV-ITMGNHIWDKKEIF- 73 (253)
T ss_dssp EEE-EBB-CHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTSS---HHHHHHHH-H--HT-SE-EE--TTTTSSTTHH-
T ss_pred CeEEecC-CHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCCC-CCHHHHHHHH-h--cCCCE-EecCcccccCcHHH-
Confidence 4688882 222233 333443 6789999999999853321 1111111111 1 22454 48999998543210
Q ss_pred ccccccccccccCcCCC-CCCCCceEEEEeCCEEEEEEeccC--CCCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccc
Q 019979 215 DAFQSYNARWKMPFEES-GSNSNLYYSFDVAGAHLIMLGSYA--DYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY 291 (333)
Q Consensus 215 ~~~~~~~~~~~~p~~~~-~~~~~~~ys~~~g~v~fi~lds~~--~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~ 291 (333)
.+-.-..+.-.|.|-+ +..+..|..++.++.++.++|-.. .......-+..+++.|++.+ .+.+.+||=+|.=..
T Consensus 74 -~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l~-~~~~~iiVDFHAEaT 151 (253)
T PF13277_consen 74 -DFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEELK-EETDIIIVDFHAEAT 151 (253)
T ss_dssp -HHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S-H
T ss_pred -HHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhcc-ccCCEEEEEeecCcH
Confidence 1100011222343322 344678999999998888888632 11111233444555555542 266778998886321
Q ss_pred cCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccc
Q 019979 292 NSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327 (333)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 327 (333)
.. +.-.-.+-+-+|.+|+.-|+|.
T Consensus 152 -----------SE-K~A~g~~lDGrvsaV~GTHTHV 175 (253)
T PF13277_consen 152 -----------SE-KQAMGWYLDGRVSAVVGTHTHV 175 (253)
T ss_dssp -----------HH-HHHHHHHHBTTBSEEEEESSSS
T ss_pred -----------HH-HHHHHHHhCCcEEEEEeCCCCc
Confidence 11 2334456677899999999996
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0034 Score=59.44 Aligned_cols=45 Identities=24% Similarity=0.134 Sum_probs=33.8
Q ss_pred CCCeeEEEEeecCCCCCh-------------hhHHHHhhcCCCCeEEccccccccccc
Q 019979 134 QFPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYM 178 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vl~~GDl~~~~~~ 178 (333)
+..+||++..|.|.+... .+++.-+.+.+.|+||..||+...+..
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkP 68 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKP 68 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCc
Confidence 567999999999876421 234444458899999999999976543
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0045 Score=56.14 Aligned_cols=68 Identities=19% Similarity=0.218 Sum_probs=41.5
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcC--CceEEccCCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKE 208 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~--~P~~~~~GNHD~~ 208 (333)
+++++||+|.... ..++++.......+-++++||+++.+.. .-+. ...+..+.-. .-++.+.||||..
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~--s~Ev-i~lL~~lki~~p~~v~lLRGNHE~~ 114 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYF--SIEC-VLYLWALKILYPKTLFLLRGNHECR 114 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCC--hHHH-HHHHHHHHhhcCCCEEEEeCCCcHH
Confidence 5789999985532 2334444444456889999999986553 1122 2222222222 3578899999984
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.046 Score=48.19 Aligned_cols=61 Identities=20% Similarity=0.234 Sum_probs=42.3
Q ss_pred HHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 263 q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
..+.+.+++++++ ++.+++||+.|-..-.. .......+.+...+-+.|+|+|+.+|.|..+
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~-----~~p~~~q~~~a~~lidaGaDiIiG~HpHv~q 229 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYE-----NYPTPEQRELARALIDAGADIIIGHHPHVIQ 229 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCC-----CCCCHHHHHHHHHHHHcCCCEEEeCCCCccc
Confidence 3477888888876 37789999999743211 1112244556556666899999999999865
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0054 Score=54.73 Aligned_cols=68 Identities=19% Similarity=0.129 Sum_probs=42.5
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhh--cCCceEEccCCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~~~GNHD~~ 208 (333)
+++++||+|.... ..++++.+.....+-++++||+++.+... -+. ...+..+. ....++.+.||||..
T Consensus 29 ~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s--~e~-l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 29 PVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFS--IEV-ILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCCh--HHH-HHHHHHHHhcCCCCEEEEeccccHH
Confidence 5789999985532 23455555456678899999999866531 111 12222221 123578899999984
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0088 Score=54.47 Aligned_cols=68 Identities=15% Similarity=0.113 Sum_probs=39.7
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhcC-CCCeEEccccccccccchhhHHHHHHhhhhhh--cCCceEEccCCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~~-~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~~~GNHD~~ 208 (333)
++.++||+|.... ..++++..... .-+-+|++||+++.+.. .-+.+ .++-.+. ..--++.+.||||..
T Consensus 52 ~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~--s~Evl-~ll~~lk~~~p~~v~llRGNHE~~ 123 (321)
T cd07420 52 QVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKR--SIEIL-IILFAFFLVYPNEVHLNRGNHEDH 123 (321)
T ss_pred CeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCC--cHHHH-HHHHHHhhcCCCcEEEecCchhhh
Confidence 6789999986532 12333333222 23679999999987653 22222 1222221 123488899999985
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0082 Score=53.90 Aligned_cols=68 Identities=22% Similarity=0.206 Sum_probs=41.2
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhh--cCCceEEccCCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~~~GNHD~~ 208 (333)
.+.++||+|..-. ..++++.......+-+|++||+++.+.... +. ...+..+. ....++.+.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~--ev-l~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSV--ET-FLLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHH--HH-HHHHHHHhhcCCCcEEEEecccchH
Confidence 4789999985432 233444444445578999999998665311 11 12222222 124589999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.008 Score=54.20 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=41.5
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhh--cCCceEEccCCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~~~GNHD~~ 208 (333)
.++++||+|.... ..++++.......+-+|++||+++.+... .+.+ ..+..+. ....++.+.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s--~e~i-~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS--LETI-CLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCc--HHHH-HHHHHhhhhCCCcEEEEecccchh
Confidence 4789999985432 23455555445567899999999866532 1221 1111221 113478899999984
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.011 Score=54.76 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=40.2
Q ss_pred eeEEEEeecCCCCCh-hhHHHHhhcCCC-CeEEccccccccccchhhHHHHHHhhhhhh--cCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGWT-KSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~-~~~~~~i~~~~~-d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~~~GNHD~~ 208 (333)
-++.++||+|..... ..+++.+..... +.+|++||+++.+.. .-+.+ ..+..+. ...-++.+.||||..
T Consensus 66 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~--SlEvl-~lL~~lki~~p~~v~lLRGNHE~~ 138 (377)
T cd07418 66 CEVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAW--GLETF-LLLLSWKVLLPDRVYLLRGNHESK 138 (377)
T ss_pred CCEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCC--hHHHH-HHHHHHhhccCCeEEEEeeecccc
Confidence 468999999865321 233443322233 459999999986653 11222 2222222 123488899999984
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.011 Score=53.38 Aligned_cols=67 Identities=21% Similarity=0.252 Sum_probs=40.1
Q ss_pred EEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhc--CCceEEccCCCCCC
Q 019979 139 FAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (333)
Q Consensus 139 f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~P~~~~~GNHD~~ 208 (333)
+.++||+|.... ..++++.+.....+-++++||+++.+... -+. ...+-.+.- ..-++.+.||||..
T Consensus 45 i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s--~ev-l~ll~~lk~~~p~~v~llrGNHE~~ 114 (303)
T PTZ00239 45 VNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNS--VET-MEYLLCLKVKYPGNITLLRGNHESR 114 (303)
T ss_pred EEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCH--HHH-HHHHHHhhhcCCCcEEEEecccchH
Confidence 788999985432 23344444344557799999999866531 111 111222211 13478899999974
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.034 Score=55.47 Aligned_cols=95 Identities=18% Similarity=0.248 Sum_probs=63.3
Q ss_pred CCCccccCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEE
Q 019979 28 RRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHH 103 (333)
Q Consensus 28 ~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (333)
..+|+.+.+++.+.....|++.-.+.++++++|.-.+.+... .|+|-++..+. .+|.. ......+
T Consensus 431 ~a~vnItt~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e--------~~~~~---~~t~~~~ 499 (996)
T KOG0196|consen 431 FASVNITTNQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDE--------RSYST---LKTKTTT 499 (996)
T ss_pred ceeEEeeccccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeeccccc--------cceeE---Eecccce
Confidence 345666776666666666777767799999999988665443 34454443211 11211 1123447
Q ss_pred EEeCCCCCCCEEEEEeCc--------CCCeeEEECCCC
Q 019979 104 TVIGPLEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 104 ~~l~~L~p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
|+|+||+|||.|-+||.. -|....|.|.+.
T Consensus 500 ~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 500 ATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred EEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 899999999999999964 267788988764
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.012 Score=53.57 Aligned_cols=68 Identities=18% Similarity=0.153 Sum_probs=41.1
Q ss_pred eEEEEeecCCCC-ChhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhc--CCceEEccCCCCCC
Q 019979 138 TFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (333)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~P~~~~~GNHD~~ 208 (333)
.++++||+|..- ...++++.......+-+|++||+++.+.. ..+.+ ..+..+.- .-.++.+.||||..
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~--s~evl-~ll~~lki~~p~~v~llRGNHE~~ 130 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQ--SLETI-CLLLAYKIKYPENFFLLRGNHECA 130 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCC--cHHHH-HHHHHhcccCCCceEEEecccchh
Confidence 488999998542 22334554444455678999999986643 12222 22222211 23578899999984
|
|
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.048 Score=52.65 Aligned_cols=56 Identities=18% Similarity=0.322 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHH-HHHHHHHhC-CCcE-EEecCcccc
Q 019979 261 SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMA-IMEPLLYAA-SVDL-VLAGHVHAY 328 (333)
Q Consensus 261 ~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~-~l~~l~~~~-~v~l-vl~GH~H~y 328 (333)
-.|.+|-.+.++.. +.+-+|++.|.|.-... .++ .+.++...+ ++++ ||.||.|..
T Consensus 211 i~~~~~~~~m~~~~---~idlii~lgH~~~~~~~---------e~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 211 ITQSEWEQDMVNTT---DIDLIIALGHSPVRDDD---------EWKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred HhccchHHHHhhcc---CccEEEEecccccccch---------hhhhHHHHHhhhCCCCceEEECchhhhh
Confidence 45667877777763 56668999999864321 122 344444444 6777 999999964
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.012 Score=52.94 Aligned_cols=68 Identities=19% Similarity=0.215 Sum_probs=40.5
Q ss_pred EEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhh-hhhhcCCceEEccCCCCCC
Q 019979 139 FAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELV-QPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 139 f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~-~~l~~~~P~~~~~GNHD~~ 208 (333)
+.++||+|.... ..++++.+.....+-++++||+++.+.. ..+.+.-.+ -.+.....++.+.||||..
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~--s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKH--SVETITLQFCYKIVYPENFFLLRGNHECA 123 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCC--HHHHHHHHHHHhhccCCeEEEEecccchH
Confidence 678999985532 2345555544455578899999986653 112211111 1122234688999999974
|
|
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.3 Score=42.89 Aligned_cols=71 Identities=20% Similarity=0.161 Sum_probs=44.1
Q ss_pred CCCCeeEEEEeecCCCCChhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCC
Q 019979 133 AQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (333)
Q Consensus 133 ~~~~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~ 210 (333)
...-.||+.++|.|...... +. -..-|+.+++||.+..+. ..+-..|.+.+..+--. =-+++.||||..-.
T Consensus 58 ~~~~~r~VcisdtH~~~~~i---~~--~p~gDvlihagdfT~~g~-~~ev~~fn~~~gslph~-yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 58 GPGYARFVCISDTHELTFDI---ND--IPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGSLPHE-YKIVIAGNHELTFD 128 (305)
T ss_pred CCCceEEEEecCcccccCcc---cc--CCCCceEEeccCCccccC-HHHHHhhhHHhccCcce-eeEEEeeccceeec
Confidence 36779999999998654321 12 366799999999996443 22223344433333221 23568999999643
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.038 Score=50.37 Aligned_cols=69 Identities=16% Similarity=0.202 Sum_probs=39.2
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhhcC-CCCeEEccccccccccchhhHHHHHHhhhhh--hcCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPL--ASARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~-~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l--~~~~P~~~~~GNHD~~ 208 (333)
-++.++||+|.... ..++++..... .-|-++++||+++.+.. .-+.+. .+-.+ ....-++.+.||||..
T Consensus 60 ~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~--S~Evl~-ll~~lki~~p~~v~lLRGNHE~~ 132 (316)
T cd07417 60 EKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSF--SVEVIL-TLFAFKLLYPNHFHLNRGNHETD 132 (316)
T ss_pred ceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCC--hHHHHH-HHHHhhhccCCceEEEeeccchH
Confidence 46889999985432 22334333221 23579999999987653 122221 11122 1123477899999973
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.05 Score=49.56 Aligned_cols=21 Identities=10% Similarity=0.238 Sum_probs=19.2
Q ss_pred HHHHHHHHHhCCCcEEEecCc
Q 019979 305 MAIMEPLLYAASVDLVLAGHV 325 (333)
Q Consensus 305 ~~~l~~l~~~~~v~lvl~GH~ 325 (333)
.+++..+++++++++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 478889999999999999997
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.043 Score=46.85 Aligned_cols=113 Identities=12% Similarity=0.130 Sum_probs=54.5
Q ss_pred EEEEeecCCCCCh------hhHHHHhh-cCCCCeEEccccccccccch---------hhH-HHH----HHhhhhhhcCCc
Q 019979 139 FAVAGDLGQTGWT------KSTLDHIG-QCKYDVHLLPGDLSYADYMQ---------HRW-DTF----GELVQPLASARP 197 (333)
Q Consensus 139 f~~~gD~~~~~~~------~~~~~~i~-~~~~d~vl~~GDl~~~~~~~---------~~~-~~~----~~~~~~l~~~~P 197 (333)
|++++|.+.+... .+.++.+. ..+|+.+|++|++++..... ... ..+ ...+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788998776332 23344445 77899999999999753321 011 111 223344555689
Q ss_pred eEEccCCCCCCCCCCcc-cccccc-ccccccCcCCCCCCCCceEEEEeCCEEEEEEec
Q 019979 198 WMVTQGNHEKESIPLIM-DAFQSY-NARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS 253 (333)
Q Consensus 198 ~~~~~GNHD~~~~~~~~-~~~~~~-~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds 253 (333)
++.+||+||........ ..+... ......- ..-..-..-+.+.+++..|.+...
T Consensus 81 vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~~~--~~~~~~sNP~~~~i~~~~i~~~s~ 136 (209)
T PF04042_consen 81 VVLVPGPNDPTSSPVLPQPPLHSKLFPKLKKY--SNIHFVSNPCRISINGQEIGVTSG 136 (209)
T ss_dssp EEEE--TTCTT-S-SCSB----TTTTCHHCTT--TTEEE--CSEEEEETTEEEEE-SS
T ss_pred EEEeCCCccccccCCCCCCCCCHHHHhhhhhc--CceEEeCCCeEEEEeCCcEEEECC
Confidence 99999999996542211 111100 0000000 000001234668889999988775
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.58 Score=31.66 Aligned_cols=71 Identities=11% Similarity=0.192 Sum_probs=40.0
Q ss_pred CceEEEEecCCCcEEEEEEcCCCCC--CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 43 PQQVHISLAGDSHMRVTWITDDESS--PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 43 p~~v~l~~~~~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
|..+.+.....+++.|+|....... .-.++|........ ....... .....+...|.+|+|++.|.++|.
T Consensus 4 p~~~~~~~~~~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~i~~L~~~~~Y~v~v~ 75 (83)
T smart00060 4 PSNLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEG----SSWKEVN----VTPSSTSYTLTGLKPGTEYEFRVR 75 (83)
T ss_pred CCcEEEEEEeCCEEEEEECCCCCCCCCccEEEEEEEEecCC----CccEEEE----ecCCccEEEEeCcCCCCEEEEEEE
Confidence 3336566555669999998542221 23566654432211 0000000 111156788999999999999985
Q ss_pred c
Q 019979 121 R 121 (333)
Q Consensus 121 ~ 121 (333)
.
T Consensus 76 a 76 (83)
T smart00060 76 A 76 (83)
T ss_pred E
Confidence 3
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.94 Score=31.57 Aligned_cols=70 Identities=17% Similarity=0.303 Sum_probs=39.6
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+......++.|.|...... ..-.|+|......... ... ........+.+.+|.|++.|.+
T Consensus 3 ~p~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~-------~~~---~~~~~~~~~~i~~l~p~~~Y~~ 72 (93)
T cd00063 3 PPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWK-------EVE---VTPGSETSYTLTGLKPGTEYEF 72 (93)
T ss_pred CCCCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCE-------Eee---ccCCcccEEEEccccCCCEEEE
Confidence 3444555555578999999876432 1123344433211000 000 0112455678899999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
+|..
T Consensus 73 ~v~a 76 (93)
T cd00063 73 RVRA 76 (93)
T ss_pred EEEE
Confidence 9853
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.35 Score=50.60 Aligned_cols=82 Identities=20% Similarity=0.349 Sum_probs=51.8
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCCC--c----EEEEeccCCCCC---eeEEeeEEEEeeeeeecCeEEEEEeCC
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDDESSP--S----VVEYGTSPGGYN---CGAEGESTSYRYLFYRSGKIHHTVIGP 108 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~--~----~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~ 108 (333)
.++..|+.|.|-...+++++|.|........ . .++|+..+.... ..+.+ ....-.+++
T Consensus 614 ~PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~-------------n~~~~l~~~ 680 (1381)
T KOG4221|consen 614 VPSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKG-------------NTTQYLFNG 680 (1381)
T ss_pred CCCCCCcceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeeccc-------------chhhhHhhc
Confidence 5556666699998889999999998754321 1 344554332111 11111 112224568
Q ss_pred CCCCCEEEEEeCc--------CCCeeEEECCC
Q 019979 109 LEHDTVYFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 109 L~p~t~Y~Y~v~~--------~s~~~~F~t~p 132 (333)
|+|+|.|.+||.. .|++..+.|+-
T Consensus 681 Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 681 LEPNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred CCCCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 9999999999853 26788888864
|
|
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.84 E-value=0.63 Score=48.42 Aligned_cols=75 Identities=15% Similarity=0.156 Sum_probs=52.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCC----CCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCC
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDD----ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 113 (333)
.+..+|..+.+.-.+.+++.|.|.... ....-.|+|....+..... ... ...+..-.++|+||+|+|
T Consensus 818 ~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~~~-----~~~----~i~~~~~~~~ltgL~~~T 888 (1051)
T KOG3513|consen 818 EPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEGSL-----SRV----QIAGNRTSWRLTGLEPNT 888 (1051)
T ss_pred CCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCCCcccc-----cce----eecCCcceEeeeCCCCCc
Confidence 567788888888778999999995432 2345689998877653111 110 122455678999999999
Q ss_pred EEEEEeCc
Q 019979 114 VYFYRCGR 121 (333)
Q Consensus 114 ~Y~Y~v~~ 121 (333)
.|++.|..
T Consensus 889 ~Y~~~vrA 896 (1051)
T KOG3513|consen 889 KYRFYVRA 896 (1051)
T ss_pred eEEEEEEE
Confidence 99999863
|
|
| >PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II) | Back alignment and domain information |
|---|
Probab=86.60 E-value=0.35 Score=26.03 Aligned_cols=18 Identities=22% Similarity=0.287 Sum_probs=10.6
Q ss_pred CcchhhH-HHHHHHHhcCC
Q 019979 1 MELKFVL-TAFVFISATVT 18 (333)
Q Consensus 1 ~~~~~~~-~~~~~~~~~~~ 18 (333)
|.||+++ ++.++.|++|+
T Consensus 6 mmKkil~~l~a~~~LagCs 24 (25)
T PF08139_consen 6 MMKKILFPLLALFMLAGCS 24 (25)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 3455444 44455588887
|
The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection []. |
| >PHA03376 BARF1; Provisional | Back alignment and domain information |
|---|
Probab=84.73 E-value=6 Score=33.04 Aligned_cols=105 Identities=9% Similarity=-0.016 Sum_probs=52.3
Q ss_pred CcchhhHHHHHHHHhcCCCCccccCCCCCCccccCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCC
Q 019979 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGY 80 (333)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~ 80 (333)
|++.|+.+|++..+. |++-+..-.=.+ .+.+|| +..- ...+.+|.|.|+-.......++.|....+..
T Consensus 1 ~~~~~~~Ll~La~l~-~sg~pVta~VGE-da~LsC---------~lnp-~ssa~~MrIrWqKs~p~~~~VvL~~~ggdVv 68 (221)
T PHA03376 1 MARFIAQLLLLASCV-AAGQAVTAFLGE-RVTLTS---------YWRR-VSLGPEIEVSWFKLGPGEEQVLIGRMHHDVI 68 (221)
T ss_pred ChhHHHHHHHHHHHh-ccCcchhheeCC-cEEEEe---------cccC-ccCCCceEEEEEecCCCCCCEEEEEcCCeee
Confidence 788888777766666 443111111112 233444 2110 1125889999999853245667776655431
Q ss_pred CeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 81 NCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
.... +-..++.. ..+.-.....|.++.+.-.=.|++.
T Consensus 69 ~~Qm--EyRGrtD~-~~~~gnvsLvI~~l~lSDdGtY~C~ 105 (221)
T PHA03376 69 FIEW--PFRGFFDI-HRSANTFFLVVTAANISHDGNYLCR 105 (221)
T ss_pred eeee--ccccEEEE-EecCCeEEEEEEeeeecCCceEEEE
Confidence 1111 11111111 1223455677778877666666654
|
|
| >KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=84.52 E-value=1.8 Score=37.49 Aligned_cols=65 Identities=23% Similarity=0.237 Sum_probs=37.6
Q ss_pred EEEeecCCCCChhhHHHHhh--cCCC-CeEEccccccccccchhhHHHHHHhh-hhhhcCCceEEccCCCCCC
Q 019979 140 AVAGDLGQTGWTKSTLDHIG--QCKY-DVHLLPGDLSYADYMQHRWDTFGELV-QPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 140 ~~~gD~~~~~~~~~~~~~i~--~~~~-d~vl~~GDl~~~~~~~~~~~~~~~~~-~~l~~~~P~~~~~GNHD~~ 208 (333)
.+.||+|.. ..++++-.. ..-| .=-|++||+++.+-. .-+.+.-++ -++.-.--+..+.||||..
T Consensus 46 tvcGDIHGQ--f~Dllelf~igG~~~~t~YLFLGDyVDRG~~--SvEt~lLLl~lK~rYP~ritLiRGNHEsR 114 (303)
T KOG0372|consen 46 TVCGDIHGQ--FYDLLELFRIGGDVPETNYLFLGDYVDRGYY--SVETFLLLLALKVRYPDRITLIRGNHESR 114 (303)
T ss_pred EEeecccch--HHHHHHHHHhCCCCCCCceEeecchhccccc--hHHHHHHHHHHhhcCcceeEEeeccchhh
Confidence 689999854 344554443 2222 347899999986542 223333221 1222224577799999985
|
|
| >PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals | Back alignment and domain information |
|---|
Probab=83.25 E-value=6.6 Score=31.55 Aligned_cols=14 Identities=21% Similarity=0.408 Sum_probs=11.9
Q ss_pred EeCCCCCCCEEEEE
Q 019979 105 VIGPLEHDTVYFYR 118 (333)
Q Consensus 105 ~l~~L~p~t~Y~Y~ 118 (333)
.+++|.|||+|+.+
T Consensus 105 qVtNL~pGTkY~is 118 (184)
T PF07353_consen 105 QVTNLQPGTKYYIS 118 (184)
T ss_pred EeeccCCCcEEEEE
Confidence 46899999999766
|
Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane |
| >PTZ00235 DNA polymerase epsilon subunit B; Provisional | Back alignment and domain information |
|---|
Probab=82.05 E-value=9.6 Score=34.16 Aligned_cols=83 Identities=8% Similarity=-0.049 Sum_probs=48.8
Q ss_pred eEEECCCCCCCeeEEEEeecCCCCCh-----hhHHHHhh-----cCCCCeEEccccccccc-----cchhhHHHHHHhhh
Q 019979 126 FEFKTPPAQFPITFAVAGDLGQTGWT-----KSTLDHIG-----QCKYDVHLLPGDLSYAD-----YMQHRWDTFGELVQ 190 (333)
Q Consensus 126 ~~F~t~p~~~~~~f~~~gD~~~~~~~-----~~~~~~i~-----~~~~d~vl~~GDl~~~~-----~~~~~~~~~~~~~~ 190 (333)
|..--..++...+|+++||++.+... +.+++... ...|-.+|++|+++... .....+.+.++.+.
T Consensus 17 ~~~~~~~~~~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La 96 (291)
T PTZ00235 17 YEIIVRKNDKRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLS 96 (291)
T ss_pred EEEEEecCCCceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHH
Confidence 34333344677899999999877531 22333332 12388999999997542 11122222222222
Q ss_pred --------hhhcCCceEEccCCCCCC
Q 019979 191 --------PLASARPWMVTQGNHEKE 208 (333)
Q Consensus 191 --------~l~~~~P~~~~~GNHD~~ 208 (333)
.+....-++.|||-.|-.
T Consensus 97 ~llls~fp~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 97 VMLISKFKLILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHHHhChHHHhcCeEEEECCCCCCC
Confidence 234557799999999974
|
|
| >KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=81.73 E-value=2 Score=37.46 Aligned_cols=65 Identities=23% Similarity=0.276 Sum_probs=37.9
Q ss_pred EEEEeecCCCCChhhHHHHh--hcCCCCe-EEccccccccccchhhHHHHHHhhhhh--hcCCceEEccCCCCCC
Q 019979 139 FAVAGDLGQTGWTKSTLDHI--GQCKYDV-HLLPGDLSYADYMQHRWDTFGELVQPL--ASARPWMVTQGNHEKE 208 (333)
Q Consensus 139 f~~~gD~~~~~~~~~~~~~i--~~~~~d~-vl~~GDl~~~~~~~~~~~~~~~~~~~l--~~~~P~~~~~GNHD~~ 208 (333)
..+.||.|..- ...++.+ ....||. .++.||.++.+....+- -.++-.+ .-.--+-.++||||..
T Consensus 62 vtvcGDvHGqf--~dl~ELfkiGG~~pdtnylfmGDyvdrGy~Svet---VS~lva~Kvry~~rvtilrGNHEsr 131 (319)
T KOG0371|consen 62 VTVCGDVHGQF--HDLIELFKIGGLAPDTNYLFMGDYVDRGYYSVET---VSLLVALKVRYPDRVTILRGNHESR 131 (319)
T ss_pred eEEecCcchhH--HHHHHHHHccCCCCCcceeeeeeecccccchHHH---HHHHHHhhccccceeEEecCchHHH
Confidence 46789998543 3444444 3556665 78899999865532211 1122112 1123466799999984
|
|
| >KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=81.57 E-value=1.6 Score=40.13 Aligned_cols=68 Identities=19% Similarity=0.160 Sum_probs=39.8
Q ss_pred eEEEEeecCCCCChhhHHHHhhc---CCCC-eEEccccccccccchhhHHHH--HHhhhhhhcCCceEEccCCCCCCCC
Q 019979 138 TFAVAGDLGQTGWTKSTLDHIGQ---CKYD-VHLLPGDLSYADYMQHRWDTF--GELVQPLASARPWMVTQGNHEKESI 210 (333)
Q Consensus 138 ~f~~~gD~~~~~~~~~~~~~i~~---~~~d-~vl~~GDl~~~~~~~~~~~~~--~~~~~~l~~~~P~~~~~GNHD~~~~ 210 (333)
-+.++||+|... ..+++-+.. ..|+ -.+++||+++.+... .+.+ .-.+ .+.-.--++...||||....
T Consensus 60 PV~i~GDiHGq~--~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~s--lE~i~LL~a~-Ki~yp~~~~lLRGNHE~~~i 133 (331)
T KOG0374|consen 60 PVKIVGDIHGQF--GDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQS--LETICLLFAL-KIKYPENVFLLRGNHECASI 133 (331)
T ss_pred CEEEEccCcCCH--HHHHHHHHhcCCCCCcccEEEecccccCCccc--eEEeehhhhh-hhhCCceEEEeccccccccc
Confidence 467899998653 244443332 2354 489999999876531 1111 1111 11122568999999999643
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 333 | ||||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-58 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-58 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-58 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 2e-55 |
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 313 bits (802), Expect = e-105
Identities = 128/329 (38%), Positives = 177/329 (53%), Gaps = 22/329 (6%)
Query: 27 PRRTLEFPWD------PKPSSHPQQVHISLAGD--SHMRVTWITD-DESSPSVVEYGTSP 77
++ PWD P + PQQVHI+ + ++W T D++ + V Y +
Sbjct: 3 NAEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSEN 62
Query: 78 GGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG--RQGPEFEFKTPPA-- 133
A G +Y+Y Y S IHH I LE+DT Y+YR G +F F TPP
Sbjct: 63 SKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPG 122
Query: 134 -QFPITFAVAGDLGQTGWTKSTLDHIGQ--CKYDVHLLPGDLSYADYM----QHRWDTFG 186
P F + GD+GQT + +TL H Q K L GDLSY++ +RWDT+G
Sbjct: 123 PDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWG 182
Query: 187 ELVQPLASARPWMVTQGNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVA 244
+ + +PW+ T GNHE + P I + F + R+ P E SGS L+Y+ A
Sbjct: 183 RFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRA 242
Query: 245 GAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGM 304
AH+I+L SY+ + +YS QY+W +L KV+R +TPWL+VL+H P YNS EAH EG+ M
Sbjct: 243 SAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAM 302
Query: 305 MAIMEPLLYAASVDLVLAGHVHAYERSVR 333
AI EP VD+V +GHVH+YERS R
Sbjct: 303 RAIFEPYFVYYKVDIVFSGHVHSYERSER 331
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 310 bits (794), Expect = e-104
Identities = 130/320 (40%), Positives = 174/320 (54%), Gaps = 17/320 (5%)
Query: 31 LEFPWDPKPSSH--PQQVHISLAGDS--HMRVTWITDDESSPSVVEYGTSPGGYNCGAEG 86
L+ P + PQQVHI+ M ++W+T DE S V Y + G A+G
Sbjct: 5 LDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKG 64
Query: 87 ESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQG--PEFEFKTPPA---QFPITFAV 141
+ ++YR+ Y SG IHHT I L+++T Y+Y G + F F TPP P TF +
Sbjct: 65 KMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGL 124
Query: 142 AGDLGQTGWTKSTLDHI--GQCKYDVHLLPGDLSYADYM----QHRWDTFGELVQPLASA 195
GDLGQ+ + +TL H K L GDLSYAD RWDT+G + +
Sbjct: 125 IGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAY 184
Query: 196 RPWMVTQGNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS 253
+PW+ T GNHE E P I + F+ ++ R+ +P+E S S S +YS A AH+I+L S
Sbjct: 185 QPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSS 244
Query: 254 YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLY 313
Y+ Y + QY WLK +L KV R +TPWL+VL+H P YNS H EG+ M E
Sbjct: 245 YSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFV 304
Query: 314 AASVDLVLAGHVHAYERSVR 333
VD+V AGHVHAYERS R
Sbjct: 305 KYKVDVVFAGHVHAYERSER 324
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 7e-32
Identities = 45/227 (19%), Positives = 67/227 (29%), Gaps = 37/227 (16%)
Query: 136 PITFAVAGDLGQTGWTKSTLDH-----------IGQCKYDVHLLPGDLSYADYM----QH 180
+ F GD G + D L GD Y +
Sbjct: 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDK 65
Query: 181 RWDTFGELV--QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMP-----FEESGS 233
R+ E V P PW V GNH+ A+ + RW P
Sbjct: 66 RFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIP 125
Query: 234 NSNLYYSFDVAGAHLIMLGSYADYDEY----------SDQYRWLKDDLSKVDRKKTPWLL 283
SN+ + + + S + Q W+K L+ K ++L
Sbjct: 126 RSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVL 182
Query: 284 VLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330
V H P ++ A G ++ + PLL V L GH H +
Sbjct: 183 VAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQY 227
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 1e-27
Identities = 44/243 (18%), Positives = 71/243 (29%), Gaps = 48/243 (19%)
Query: 134 QFPITFAVAGDLG-----QTGWTKSTLDHIGQCKYDVHLLPGDLSY---ADYMQHRWDTF 185
+ + FA GD G Q K I + + PG W
Sbjct: 1 KCQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNL 60
Query: 186 GELV---QPLASARPWMVTQGNHE-------------------KESIPLIMDAFQSYNAR 223
E V + P+ G + + DA + +
Sbjct: 61 YEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPK 120
Query: 224 WKMP---------FEESGSNSNLYYSFDVAGAHLIML------GSYADYDEYSDQYRWLK 268
W MP F S S + A I + ++ + + LK
Sbjct: 121 WIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLK 180
Query: 269 DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328
LS K +++V+ P Y+S + + + PLL A VDL ++GH +
Sbjct: 181 SQLSVAK-KIADFIIVVGDQPIYSS--GYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNM 237
Query: 329 ERS 331
E
Sbjct: 238 EVI 240
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 1e-10
Identities = 29/185 (15%), Positives = 57/185 (30%), Gaps = 30/185 (16%)
Query: 154 TLDHIGQCKYDVHLL--PGDLSYADYMQHRWDTFGELVQPLASAR-PWMVTQGNHEKESI 210
+ + + + GD+ R + + Q L S P + GNH+
Sbjct: 31 VVSQLNALRERPDAVVVSGDIV----NCGRPEEYQVARQILGSLNYPLYLIPGNHD--DK 84
Query: 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSY---ADYDEYSD-QYRW 266
L ++ Q + +N+ + D L+ + S +D W
Sbjct: 85 ALFLEYLQPL------CPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISW 138
Query: 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMM-----AIMEPLLYAASVDLVL 321
L+ L + K + +H P A D + ++ + S+ +
Sbjct: 139 LEAQLFEGGDKPA---TIFMHHPPLPLGNAQ---MDPIACENGHRLLALVERFPSLTRIF 192
Query: 322 AGHVH 326
GH H
Sbjct: 193 CGHNH 197
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 1e-09
Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 31/202 (15%)
Query: 155 LDHIGQCKYDVHLLPGDLSY-ADYMQHRWDTFGELVQPLASAR-PWMVTQGNHE------ 206
L + K DV ++ GDL+ + H + + + V GNH+
Sbjct: 85 LADVESKKTDVLIISGDLTNNGEKTSHEE--LAKKLTQVEKNGTQVFVVPGNHDINNPWA 142
Query: 207 ----KESIPLIMDAFQSYNARWKMPF-----EESGSNSNLYYSFDVAGAHLIMLGSYADY 257
K+ + ++ F S S Y + + L+ML +
Sbjct: 143 RKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYK 202
Query: 258 DEYS------------DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMM 305
W+K+ + + + VL H +++ +G
Sbjct: 203 TNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYN 262
Query: 306 AIMEPLLYAASVDLVLAGHVHA 327
+ L ++D L+GH+H
Sbjct: 263 QQVIDALTEGAMDFSLSGHIHT 284
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 1e-09
Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 31/185 (16%)
Query: 154 TLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASAR--PWMVTQGNHEKES 209
L+ + Q + D + GDL+ + LV+P A+ + GNH
Sbjct: 56 LLEQLNQSGLRPDAIVFTGDLA-DKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNH---- 110
Query: 210 IPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEY----SDQYR 265
D +E+ S + L + G +I+L + + + Q
Sbjct: 111 -----DDRAELRKFL---LDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 162
Query: 266 WLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMM----AIMEPLLYAASVDLVL 321
WL ++L+ T ++ LH P S + A + +L V +L
Sbjct: 163 WLAEELATPAPDGT---ILALHHPPIPSVLDM---AVTVELRDQAALGRVLRGTDVRAIL 216
Query: 322 AGHVH 326
AGH+H
Sbjct: 217 AGHLH 221
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 51.5 bits (122), Expect = 1e-07
Identities = 32/232 (13%), Positives = 58/232 (25%), Gaps = 54/232 (23%)
Query: 154 TLDHIGQCKYDVHLLPGDLSYADYMQHRWD--TFGELVQPLASAR-PWMVTQGNHEKESI 210
+ + + + GD+ + ++ L + GNHE +
Sbjct: 43 AVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNF 102
Query: 211 P---LIMDAFQSYNARWKMPFEESGSNSNLYYSFDVA-GAHLIMLGSYADYDEYSD---- 262
L+ S + + Y F A ++L +Y +
Sbjct: 103 SRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESE 162
Query: 263 ------------------------------------------QYRWLKDDLSKVDRKKTP 280
Q +WL L+ D K+
Sbjct: 163 KHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQER 222
Query: 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSV 332
L + H+P + A++ L SV +AGH H R
Sbjct: 223 VL-IFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT 273
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 1e-05
Identities = 25/194 (12%), Positives = 50/194 (25%), Gaps = 9/194 (4%)
Query: 141 VAGDL-GQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWM 199
+ G + + D L G+L + F ++ P
Sbjct: 10 ATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAH--LPTA 67
Query: 200 VTQGNHEKESIPLIMDAFQSYNARWKM-PFEESGSNSNLYYSFDVAGAHLIMLGSYADYD 258
G + + +A +M E+ + Y G + G +++
Sbjct: 68 YVPGPQDAPIWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHE 127
Query: 259 EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVD 318
+ L + K + L H Y+ QG + L+ +
Sbjct: 128 ALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQG-----SHEVAHLIKTHNPL 182
Query: 319 LVLAGHVHAYERSV 332
LVL +
Sbjct: 183 LVLVAGKGQKHEML 196
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 333 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.96 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.94 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.89 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.89 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.88 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.85 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.67 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.65 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.54 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.46 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.45 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.35 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.31 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.28 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.23 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.2 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.17 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.16 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.15 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.13 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.13 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.13 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.08 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.07 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.03 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.91 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.89 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.78 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.74 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.7 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.65 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.65 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.48 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.42 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.33 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.3 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 98.23 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.18 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 98.16 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 98.12 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.85 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 97.75 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.71 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.71 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.7 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 97.6 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.58 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 97.57 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 97.52 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 97.51 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 97.48 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.48 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.44 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.43 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 97.42 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.39 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 97.36 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 97.34 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 97.34 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 97.31 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 97.29 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 97.27 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.27 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.27 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 97.25 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.24 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 97.22 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 97.22 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 97.19 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 97.18 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 97.14 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 97.12 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 97.12 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 97.12 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 97.12 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 97.11 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 97.08 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 97.08 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.07 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 97.06 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 97.05 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 97.02 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 97.01 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 97.0 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 97.0 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 96.99 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.98 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 96.98 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.98 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 96.97 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 96.96 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 96.95 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 96.94 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 96.93 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 96.92 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 96.91 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.91 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.91 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 96.9 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 96.88 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.88 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.87 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 96.86 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 96.85 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 96.84 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 96.82 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 96.82 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 96.79 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 96.79 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.75 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 96.75 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.74 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 96.73 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 96.72 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 96.67 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 96.63 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 96.58 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 96.48 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 96.48 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 96.48 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 96.45 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 96.45 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 96.36 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 96.35 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 96.34 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 96.33 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 96.32 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 96.31 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 96.28 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 96.21 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 96.21 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 96.14 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 96.08 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 96.06 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 96.04 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 96.04 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.92 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 95.91 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 95.91 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 95.9 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.9 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.89 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 95.81 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.8 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.75 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 95.73 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 95.72 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 95.68 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 95.67 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 95.62 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 95.61 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 95.59 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 95.55 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 95.54 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.43 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 95.42 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.42 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 95.32 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 95.26 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 95.03 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 94.75 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 94.68 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 94.67 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 94.52 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 94.4 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 94.33 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 94.21 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 94.13 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 94.08 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 94.07 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 93.77 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 93.66 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 92.99 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 92.88 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 92.81 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 92.16 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 91.9 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 91.83 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 91.54 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 91.46 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 91.33 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 91.16 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 91.06 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 91.04 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 91.04 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 90.94 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 90.92 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 90.54 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 90.54 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 90.29 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 89.92 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 89.76 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 89.21 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 89.15 | |
| 3b4n_A | 344 | Endo-pectate lyase; pectin, galacturonic acid, rig | 87.7 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 87.38 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 86.72 | |
| 4doh_R | 221 | Interleukin-20 receptor subunit alpha; IL10 family | 86.35 | |
| 4doh_B | 206 | Interleukin-20 receptor subunit beta; IL10 family | 85.08 | |
| 2nzi_A | 305 | Titin; IG-domain, FNIII-domain, transferase; 2.90A | 85.02 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 83.76 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 80.93 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 80.79 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 80.51 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-55 Score=416.32 Aligned_cols=296 Identities=42% Similarity=0.722 Sum_probs=251.0
Q ss_pred CCCCCCceEEEEecC--CCcEEEEEEcC-CCCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 38 KPSSHPQQVHISLAG--DSHMRVTWITD-DESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~--~~~~~v~W~t~-~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
.....|+||||++++ .++|+|+|.|. +.++.+.|+|++.++.+...+.++..+|.+.....++.|+|+|+||+|||+
T Consensus 20 ~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 99 (426)
T 1xzw_A 20 SGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTK 99 (426)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCE
T ss_pred CCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEEEEECCCCCCCE
Confidence 355789999999988 59999999999 777889999999988787788877766665545789999999999999999
Q ss_pred EEEEeCc--CCCeeEEECCCC---CCCeeEEEEeecCCCCChhhHHHHhhcC--CCCeEEccccccccccc----hhhHH
Q 019979 115 YFYRCGR--QGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIGQC--KYDVHLLPGDLSYADYM----QHRWD 183 (333)
Q Consensus 115 Y~Y~v~~--~s~~~~F~t~p~---~~~~~f~~~gD~~~~~~~~~~~~~i~~~--~~d~vl~~GDl~~~~~~----~~~~~ 183 (333)
|+|||+. +|+.++|+|+|. ..++||+++||+|.......+++.+.+. +|||||++||++|.++. ...|+
T Consensus 100 Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~ 179 (426)
T 1xzw_A 100 YYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWD 179 (426)
T ss_dssp EEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHH
T ss_pred EEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHH
Confidence 9999985 578999999985 5789999999998765556678887755 89999999999997654 46799
Q ss_pred HHHHhhhhhhcCCceEEccCCCCCCCCCC--ccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCH
Q 019979 184 TFGELVQPLASARPWMVTQGNHEKESIPL--IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYS 261 (333)
Q Consensus 184 ~~~~~~~~l~~~~P~~~~~GNHD~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~ 261 (333)
.|.+.++++...+|+++++||||+...+. ....+..|.++|.+|.++.+..++.||+|++|+++||+||++..+..+.
T Consensus 180 ~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~ 259 (426)
T 1xzw_A 180 TWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYS 259 (426)
T ss_dssp HHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTS
T ss_pred HHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCH
Confidence 99999999888899999999999965321 1135667888888987655555688999999999999999988777789
Q ss_pred HHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccccccC
Q 019979 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333 (333)
Q Consensus 262 ~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R~~~ 333 (333)
+|++||+++|+++++++++|+||++|+|+++....+.++...+++.|.++|++++|+++|+||+|.|+|++|
T Consensus 260 ~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p 331 (426)
T 1xzw_A 260 PQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSER 331 (426)
T ss_dssp HHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECS
T ss_pred HHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeee
Confidence 999999999999876678999999999999876544455566899999999999999999999999999875
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-54 Score=406.23 Aligned_cols=295 Identities=43% Similarity=0.742 Sum_probs=244.6
Q ss_pred CCCCCceEEEEecC--CCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 39 PSSHPQQVHISLAG--DSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 39 ~~~~p~~v~l~~~~--~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
....|+||||++++ .++|+|+|.|.+.++.+.|+|++.++.....+.|+..+|.+.....+++|+|+|+||+|||+|+
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 94 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYY 94 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEEEECSCCTTCEEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEEEECCCCCCCEEE
Confidence 34579999999987 5899999999876778899999998877777888766665544567899999999999999999
Q ss_pred EEeCc--CCCeeEEECCCC---CCCeeEEEEeecCCCCChhhHHHHhhcC--CCCeEEccccccccccc----hhhHHHH
Q 019979 117 YRCGR--QGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIGQC--KYDVHLLPGDLSYADYM----QHRWDTF 185 (333)
Q Consensus 117 Y~v~~--~s~~~~F~t~p~---~~~~~f~~~gD~~~~~~~~~~~~~i~~~--~~d~vl~~GDl~~~~~~----~~~~~~~ 185 (333)
|||+. +|+.++|+|+|. ..++||+++||+|.......+++.+.+. +|||||++||++|.++. ...|+.|
T Consensus 95 Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~ 174 (424)
T 2qfp_A 95 YEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTW 174 (424)
T ss_dssp EEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHH
T ss_pred EEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHH
Confidence 99986 478999999985 4689999999999765445567777654 89999999999997643 3578888
Q ss_pred HHhhhhhhcCCceEEccCCCCCCCCCCcc--ccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHH
Q 019979 186 GELVQPLASARPWMVTQGNHEKESIPLIM--DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQ 263 (333)
Q Consensus 186 ~~~~~~l~~~~P~~~~~GNHD~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q 263 (333)
.+.++++...+|+++++||||+...+... ..+..|..+|.+|..+.....+.||+|++|+++||+||+...+....+|
T Consensus 175 ~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q 254 (424)
T 2qfp_A 175 GRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQ 254 (424)
T ss_dssp HHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHH
T ss_pred HHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHH
Confidence 88899888889999999999986432111 2456777888888765445568899999999999999998776666799
Q ss_pred HHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccccccC
Q 019979 264 YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333 (333)
Q Consensus 264 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R~~~ 333 (333)
++||+++|++.++++++|+|+++|+|+++....+..+...+++.|.++|++++|+++|+||+|.|+|++|
T Consensus 255 ~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~ 324 (424)
T 2qfp_A 255 YTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSER 324 (424)
T ss_dssp HHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECS
T ss_pred HHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheecc
Confidence 9999999999876567899999999999865444344556788999999999999999999999999864
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=282.90 Aligned_cols=275 Identities=22% Similarity=0.308 Sum_probs=191.5
Q ss_pred EEecC--CCcEEEEEEcCCCC---------CCcEEEEeccCCC-C-CeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 48 ISLAG--DSHMRVTWITDDES---------SPSVVEYGTSPGG-Y-NCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 48 l~~~~--~~~~~v~W~t~~~~---------~~~~v~y~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
++.++ .+++ |.|...... ....|+|....+. . .....|...+. ...+++|+|.|+||+|||+
T Consensus 13 vasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~----~~~~~t~~v~v~gL~P~t~ 87 (527)
T 2yeq_A 13 VASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAK----PSLAHSVHVEADGLEPNKV 87 (527)
T ss_dssp EEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEEC----GGGTTEEEEEECSCCTTCE
T ss_pred ccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEec----CCCceEEEeecCCcCCCCE
Confidence 45454 5566 678876321 2345666555433 2 23344443221 2568999999999999999
Q ss_pred EEEEeCc---CCCeeEEECCCC----CCCeeEEEEeecCCCCChhhHHHHhhcCCCCeEEccccccccccchh-------
Q 019979 115 YFYRCGR---QGPEFEFKTPPA----QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH------- 180 (333)
Q Consensus 115 Y~Y~v~~---~s~~~~F~t~p~----~~~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~------- 180 (333)
|+||++. .|+.++|+|+|. ..+++|+++||.+.......+++.|.+.+|||||++||++|.++...
T Consensus 88 Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~ 167 (527)
T 2yeq_A 88 YYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGN 167 (527)
T ss_dssp EEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCCTTCC
T ss_pred EEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCcccccccc
Confidence 9999965 378899999986 26899999999876433346788888889999999999999865321
Q ss_pred ----------hHHHHH---------HhhhhhhcCCceEEccCCCCCCCCCCcc--c------cc-----ccccccc-ccC
Q 019979 181 ----------RWDTFG---------ELVQPLASARPWMVTQGNHEKESIPLIM--D------AF-----QSYNARW-KMP 227 (333)
Q Consensus 181 ----------~~~~~~---------~~~~~l~~~~P~~~~~GNHD~~~~~~~~--~------~~-----~~~~~~~-~~p 227 (333)
.++.|. ..++.+.+.+|+++++||||+.++.... . .| ..++.+| .+|
T Consensus 168 ~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P 247 (527)
T 2yeq_A 168 VRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMP 247 (527)
T ss_dssp CSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSC
T ss_pred cccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCC
Confidence 122221 1356677789999999999997542110 0 00 1222222 244
Q ss_pred cCC----CCCCCCceEEEEeCC-EEEEEEeccCCCC----------------------CCHHHHHHHHHHhhcccCCCCC
Q 019979 228 FEE----SGSNSNLYYSFDVAG-AHLIMLGSYADYD----------------------EYSDQYRWLKDDLSKVDRKKTP 280 (333)
Q Consensus 228 ~~~----~~~~~~~~ys~~~g~-v~fi~lds~~~~~----------------------~~~~q~~WL~~~L~~~~~~~~~ 280 (333)
... .+.....||+|++|+ ++||+||+....+ .+.+|++||++.|++. +++
T Consensus 248 ~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s---~a~ 324 (527)
T 2yeq_A 248 LRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS---TAH 324 (527)
T ss_dssp CCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHC---CSS
T ss_pred CCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcC---CCC
Confidence 321 122347899999999 9999999954211 3589999999999984 678
Q ss_pred eEEEEeccccccCCCC-----------CCCCChhHHHHHHHHHHhCCCc--EEEecCccccccc
Q 019979 281 WLLVLLHVPWYNSNEA-----------HQGEGDGMMAIMEPLLYAASVD--LVLAGHVHAYERS 331 (333)
Q Consensus 281 ~~iv~~H~P~~~~~~~-----------~~~~~~~~~~~l~~l~~~~~v~--lvl~GH~H~y~R~ 331 (333)
|+||++|+|++..... |.+ -...+++|+++|.+++|+ ++|+||+|.++++
T Consensus 325 W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g-~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~ 387 (527)
T 2yeq_A 325 WNVLAQQIFFAKWNFGTSASPIYSMDSWDG-YPAQRERVINFIKSKNLNNVVVLTGDVHASWAS 387 (527)
T ss_dssp EEEEECSSCCSCCCSSCSSSCCEETTSGGG-SHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEE
T ss_pred eEEEEeCCcccccccCCCcccccCccchhc-cHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHh
Confidence 9999999999865321 111 124689999999999984 9999999999986
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=229.88 Aligned_cols=183 Identities=19% Similarity=0.261 Sum_probs=129.8
Q ss_pred CCeeEEEEeecCCCCChhh-----HHHHhhcCCCCeEEccccccccccc---hhhHHHHH-Hhhhhh--hcCCceEEccC
Q 019979 135 FPITFAVAGDLGQTGWTKS-----TLDHIGQCKYDVHLLPGDLSYADYM---QHRWDTFG-ELVQPL--ASARPWMVTQG 203 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~~~~-----~~~~i~~~~~d~vl~~GDl~~~~~~---~~~~~~~~-~~~~~l--~~~~P~~~~~G 203 (333)
.+++|+++||+|.+...+. +.+.+++.+|||||++||++|.+.. ...|...+ +..+.+ ...+|+++++|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 5799999999997654332 2233457899999999999997331 34454433 333332 23599999999
Q ss_pred CCCCCCCCCccccc-------------------cccccccccCcCCCCCCCCceEEE----Ee---------C----CEE
Q 019979 204 NHEKESIPLIMDAF-------------------QSYNARWKMPFEESGSNSNLYYSF----DV---------A----GAH 247 (333)
Q Consensus 204 NHD~~~~~~~~~~~-------------------~~~~~~~~~p~~~~~~~~~~~ys~----~~---------g----~v~ 247 (333)
|||+..+...+..+ .....+|.||. .||++ .. | .++
T Consensus 82 NHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~~~v~ 153 (342)
T 3tgh_A 82 TRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKDLAAA 153 (342)
T ss_dssp HHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEEEEEE
T ss_pred CCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCCceEE
Confidence 99997543221111 12445677773 67765 32 3 399
Q ss_pred EEEEeccCCCC----------CCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCC
Q 019979 248 LIMLGSYADYD----------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASV 317 (333)
Q Consensus 248 fi~lds~~~~~----------~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v 317 (333)
||+|||..... ...+|++||+++|++ ++|+||++|+|+++... .+....+++.|.++|++++|
T Consensus 154 fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~--~~~~~~l~~~l~~ll~~~~V 226 (342)
T 3tgh_A 154 FIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGY--SRGSSYLAYYLLPLLKDAEV 226 (342)
T ss_dssp EEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSST--TCCCHHHHHHTHHHHHHTTC
T ss_pred EEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCC--CCCcHHHHHHHHHHHHHcCC
Confidence 99999964221 125899999999943 47999999999998754 23344578999999999999
Q ss_pred cEEEecCcccccccc
Q 019979 318 DLVLAGHVHAYERSV 332 (333)
Q Consensus 318 ~lvl~GH~H~y~R~~ 332 (333)
+++|+||.|.|+|..
T Consensus 227 dlvlsGH~H~~~~~~ 241 (342)
T 3tgh_A 227 DLYISGHDNNMEVIE 241 (342)
T ss_dssp CEEEECSSSSEEEEE
T ss_pred CEEEECCCcceeEEe
Confidence 999999999999875
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-27 Score=213.16 Aligned_cols=189 Identities=24% Similarity=0.371 Sum_probs=127.2
Q ss_pred CCCCCCCeeEEEEeecCCCCC-------h---hhHHHH-hhcCCCCeEEccccccccccchhhHH-HHHHhhhhhh----
Q 019979 130 TPPAQFPITFAVAGDLGQTGW-------T---KSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWD-TFGELVQPLA---- 193 (333)
Q Consensus 130 t~p~~~~~~f~~~gD~~~~~~-------~---~~~~~~-i~~~~~d~vl~~GDl~~~~~~~~~~~-~~~~~~~~l~---- 193 (333)
|+| .++++|+++||+|.... . .+.+.. +...+|||||++||++|..+....++ .+.+.++.+.
T Consensus 1 t~~-~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~ 79 (313)
T 1ute_A 1 TAP-TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPS 79 (313)
T ss_dssp --C-CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGG
T ss_pred CCC-CCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchh
Confidence 344 57899999999998642 1 122322 44679999999999988654321111 2233332221
Q ss_pred c-CCceEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEe------CCEEEEEEeccCC----------
Q 019979 194 S-ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDV------AGAHLIMLGSYAD---------- 256 (333)
Q Consensus 194 ~-~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~------g~v~fi~lds~~~---------- 256 (333)
. .+|+++++||||..........+.....+|.+| ..||++.+ ++++||+||+...
T Consensus 80 l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ 151 (313)
T 1ute_A 80 LRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQ 151 (313)
T ss_dssp GTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTC
T ss_pred hcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCcccccc
Confidence 2 589999999999853211001122222344444 46888888 4899999998531
Q ss_pred ----C---CCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 257 ----Y---DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 257 ----~---~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
. ....+|++||++.|++.. .+|+|+++|+|++..... +.....++.+.+++++++|+++|+||+|.++
T Consensus 152 ~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~ 226 (313)
T 1ute_A 152 QPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQ 226 (313)
T ss_dssp SCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEE
T ss_pred ccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEEECChhhhh
Confidence 0 014799999999999873 479999999999875432 2233457889999999999999999999988
Q ss_pred ccc
Q 019979 330 RSV 332 (333)
Q Consensus 330 R~~ 332 (333)
+..
T Consensus 227 ~~~ 229 (313)
T 1ute_A 227 YLQ 229 (313)
T ss_dssp EEE
T ss_pred hcc
Confidence 764
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-23 Score=190.02 Aligned_cols=186 Identities=17% Similarity=0.159 Sum_probs=124.7
Q ss_pred CCCeeEEEEeecCCCCCh--------------------hhHHHHhhcCCCCeEEccccccccccch--hhHHHHHHhhhh
Q 019979 134 QFPITFAVAGDLGQTGWT--------------------KSTLDHIGQCKYDVHLLPGDLSYADYMQ--HRWDTFGELVQP 191 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~--------------------~~~~~~i~~~~~d~vl~~GDl~~~~~~~--~~~~~~~~~~~~ 191 (333)
...+||+++||+|..... .++++.+.+.+||+||++||+++.+... ..++.+...++.
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 457999999999976421 2344455568999999999999854321 113333333333
Q ss_pred hhc-CCceEEccCCCCCCCCCCccccccccccccc-------------cCcCCCCCCCCceEEEEe-CCEEEEEEeccCC
Q 019979 192 LAS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWK-------------MPFEESGSNSNLYYSFDV-AGAHLIMLGSYAD 256 (333)
Q Consensus 192 l~~-~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~-------------~p~~~~~~~~~~~ys~~~-g~v~fi~lds~~~ 256 (333)
+.. .+|+++++||||...... ..+.+.+. +|. .+..||+|+. ++++||+||+...
T Consensus 83 l~~~~~p~~~v~GNHD~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~ld~~~~ 152 (322)
T 2nxf_A 83 LDACSVDVHHVWGNHEFYNFSR-----PSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVLLDAYDL 152 (322)
T ss_dssp HHTTCSEEEECCCHHHHHHCCH-----HHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEECCTTSB
T ss_pred HHhcCCcEEEecCCCCcccCCH-----HHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEEEcCcee
Confidence 332 489999999999842111 11222221 121 1357899998 9999999998541
Q ss_pred ----------------------------------------------CCCCHHHHHHHHHHhhcccCCCCCeEEEEecccc
Q 019979 257 ----------------------------------------------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPW 290 (333)
Q Consensus 257 ----------------------------------------------~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~ 290 (333)
.....+|++||++.|+++.+ +..++||++|+|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv~~H~p~ 231 (322)
T 2nxf_A 153 SVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPV 231 (322)
T ss_dssp CSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCC
T ss_pred cccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEEEEccCC
Confidence 01237999999999998743 1346899999999
Q ss_pred ccCCCCCCCCChhHHHHHHHHHHhC-CCcEEEecCccccccc
Q 019979 291 YNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERS 331 (333)
Q Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~R~ 331 (333)
+......... ....+.+.++++++ +|+++|+||+|.+++.
T Consensus 232 ~~~~~~~~~~-~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~ 272 (322)
T 2nxf_A 232 HPCAADPICL-AWNHEAVLSVLRSHQSVLCFIAGHDHDGGRC 272 (322)
T ss_dssp CTTSSCGGGS-CTTHHHHHHHHHTCTTEEEEEECSCTTCEEE
T ss_pred CCCCCCcccc-ccCHHHHHHHHhcCCCeEEEEcCCcCCCCce
Confidence 8654321010 11357899999999 7999999999998764
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-23 Score=188.86 Aligned_cols=181 Identities=20% Similarity=0.217 Sum_probs=128.6
Q ss_pred CCCeeEEEEeecCCCCC-------------hhhHHHHhhc--CCCCeEEccccccccccchhhHHHHHHhhhhhhc--CC
Q 019979 134 QFPITFAVAGDLGQTGW-------------TKSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--AR 196 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-------------~~~~~~~i~~--~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~ 196 (333)
..++||+++||+|.... ..++++.+.+ .++|+||++||+++.+. ...|+.+.+.++.+.. .+
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~l~~~~~~ 101 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-PAAYRKLRGLVEPFAAQLGA 101 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC-HHHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHHHHhhcCC
Confidence 67899999999997421 1345566655 79999999999997554 4567777777776633 58
Q ss_pred ceEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC----CCCHHHHHHHHHHhh
Q 019979 197 PWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLS 272 (333)
Q Consensus 197 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~WL~~~L~ 272 (333)
|+++++||||.. ..+ ...+... .......+|++++++++|++||+.... ....+|++||++.|+
T Consensus 102 pv~~v~GNHD~~------~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~ 169 (330)
T 3ib7_A 102 ELVWVMGNHDDR------AEL---RKFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELA 169 (330)
T ss_dssp EEEECCCTTSCH------HHH---HHHHHCC---CCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHTT
T ss_pred CEEEeCCCCCCH------HHH---HHHhccc---ccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHHH
Confidence 999999999983 111 1111111 111246789999999999999986421 236899999999999
Q ss_pred cccCCCCCeEEEEeccccccCCCCCCC-CChhHHHHHHHHHHhCCCcEEEecCcccccc
Q 019979 273 KVDRKKTPWLLVLLHVPWYNSNEAHQG-EGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 273 ~~~~~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
+... ..+|+++|||++........ ......+.+.+++++++++++|+||+|....
T Consensus 170 ~~~~---~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~ 225 (330)
T 3ib7_A 170 TPAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTN 225 (330)
T ss_dssp SCCT---TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred hccc---CCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCccc
Confidence 8743 23788999988764322110 1112357899999999999999999998763
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-22 Score=177.78 Aligned_cols=179 Identities=15% Similarity=0.193 Sum_probs=122.4
Q ss_pred eeEEEEeecCCCCC-------------hhhHHHHhhc--CCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEc
Q 019979 137 ITFAVAGDLGQTGW-------------TKSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-------------~~~~~~~i~~--~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~ 201 (333)
+||+++||+|.... ..++++.+++ .++|+||++||+++.+. ...|+.+.+.++.+ .+|++++
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~l--~~p~~~v 77 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-PEEYQVARQILGSL--NYPLYLI 77 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-HHHHHHHHHHHTTC--SSCEEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHhc--CCCEEEE
Confidence 58999999997641 1344555554 36899999999997544 34566666666655 4899999
Q ss_pred cCCCCCCCCCCcccccc-ccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC----CCCHHHHHHHHHHhhcccC
Q 019979 202 QGNHEKESIPLIMDAFQ-SYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVDR 276 (333)
Q Consensus 202 ~GNHD~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~WL~~~L~~~~~ 276 (333)
+||||... .+. .+...| ++.... .+..+|+++.++++|++||+.... ....+|++||++.|++.+
T Consensus 78 ~GNHD~~~------~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~~~- 147 (274)
T 3d03_A 78 PGNHDDKA------LFLEYLQPLC-PQLGSD--ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGG- 147 (274)
T ss_dssp CCTTSCHH------HHHHHHGGGS-GGGCSC--GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHT-
T ss_pred CCCCCCHH------HHHHHhhhhh-cCcccC--CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHhCC-
Confidence 99999841 111 111111 111000 024578999999999999986421 235899999999999862
Q ss_pred CCCCeEEEEeccccccCCCCCCC-CChhHHHHHHHHHHhC-CCcEEEecCcccccc
Q 019979 277 KKTPWLLVLLHVPWYNSNEAHQG-EGDGMMAIMEPLLYAA-SVDLVLAGHVHAYER 330 (333)
Q Consensus 277 ~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~R 330 (333)
.+++|+++|+|++.....+.. ......+.+.++++++ +|+++|+||+|..+.
T Consensus 148 --~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~ 201 (274)
T 3d03_A 148 --DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTM 201 (274)
T ss_dssp --TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEE
T ss_pred --CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchh
Confidence 346999999999865432111 0112346788999999 899999999998764
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=177.28 Aligned_cols=195 Identities=17% Similarity=0.193 Sum_probs=126.5
Q ss_pred CCCeeEEEEeecCCCCC-----------------------h----hhHHHHhhcCCCCeEEccccccccccchhhHHHHH
Q 019979 134 QFPITFAVAGDLGQTGW-----------------------T----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFG 186 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-----------------------~----~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~ 186 (333)
+.++||++++|+|.... . ..+++.+.+.+||+||++||+++.+. ...++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGE-KTSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCC-HHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-HHHHHHHH
Confidence 57799999999997532 1 23444555778999999999997554 34566666
Q ss_pred Hhhhhhhc-CCceEEccCCCCCCCCCCcc-c----------cccccccccccCcCC----CCCCCCceEEEEeCCEEEEE
Q 019979 187 ELVQPLAS-ARPWMVTQGNHEKESIPLIM-D----------AFQSYNARWKMPFEE----SGSNSNLYYSFDVAGAHLIM 250 (333)
Q Consensus 187 ~~~~~l~~-~~P~~~~~GNHD~~~~~~~~-~----------~~~~~~~~~~~p~~~----~~~~~~~~ys~~~g~v~fi~ 250 (333)
+.++.+.. .+|+++++||||........ . ....|.+.|...... .......|+.+..++++||+
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ 195 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEEE
Confidence 66766643 48999999999995321100 0 011122222110000 00011234445578999999
Q ss_pred EeccCC------------CCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCC-ChhHHHHHHHHHHhCCC
Q 019979 251 LGSYAD------------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE-GDGMMAIMEPLLYAASV 317 (333)
Q Consensus 251 lds~~~------------~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~-~~~~~~~l~~l~~~~~v 317 (333)
||+... .....+|++||++.|++++. +...+|+++|+|++.....+... .....+.+.+++++++|
T Consensus 196 Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v 274 (443)
T 2xmo_A 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAM 274 (443)
T ss_dssp CCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTC
T ss_pred eeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCC
Confidence 999642 12358999999999988753 23458999999997654322111 11235789999999999
Q ss_pred cEEEecCcccccc
Q 019979 318 DLVLAGHVHAYER 330 (333)
Q Consensus 318 ~lvl~GH~H~y~R 330 (333)
+++|+||+|....
T Consensus 275 ~lvl~GH~H~~~~ 287 (443)
T 2xmo_A 275 DFSLSGHIHTQNI 287 (443)
T ss_dssp CEEEECSSCSCEE
T ss_pred eEEEECCcccCch
Confidence 9999999998654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-16 Score=136.62 Aligned_cols=170 Identities=11% Similarity=-0.026 Sum_probs=100.3
Q ss_pred CeeEEEEeecCCCCCh-hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCcc
Q 019979 136 PITFAVAGDLGQTGWT-KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~~-~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~ 214 (333)
.+||+++||+|..... .++++.+.+.++|+||++||+++.+.....+..+.+.++.+ ..|+++++||||....
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~v~GNHD~~~~---- 78 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYVPGPQDAPIW---- 78 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEECCTTSCSHH----
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEEECCCCCchhH----
Confidence 5899999999976321 34445555568999999999997653333344444444332 3799999999998421
Q ss_pred ccccccccccc----cCcCCCCCCCCceEEEEeC-CEEEEEEeccC--CCCCCHHH--------HHHHHHHhhcccCCCC
Q 019979 215 DAFQSYNARWK----MPFEESGSNSNLYYSFDVA-GAHLIMLGSYA--DYDEYSDQ--------YRWLKDDLSKVDRKKT 279 (333)
Q Consensus 215 ~~~~~~~~~~~----~p~~~~~~~~~~~ys~~~g-~v~fi~lds~~--~~~~~~~q--------~~WL~~~L~~~~~~~~ 279 (333)
......+. .|.... ..+ ..+.++ +++|+.++... .+....++ .+|+++.|++...
T Consensus 79 ---~~~~~~~~~~~~~~~~~~--l~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--- 148 (228)
T 1uf3_A 79 ---EYLREAANVELVHPEMRN--VHE--TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKD--- 148 (228)
T ss_dssp ---HHHHHHHHHHHHCTTEEE--CBT--SEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCS---
T ss_pred ---HHHHhhhhhhccCcceEE--ccc--ceEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCCC---
Confidence 11111110 011000 001 134556 89999887421 11111222 2444555555432
Q ss_pred CeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcc
Q 019979 280 PWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (333)
Q Consensus 280 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 326 (333)
.++|+++|+|++....... ..+.+.+++++++++++++||+|
T Consensus 149 ~~~il~~H~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 149 YPKIFLFHTMPYHKGLNEQ-----GSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp CCEEEEESSCBCBTTTBTT-----SBHHHHHHHHHHCCSEEEECCSS
T ss_pred CCeEEEEccCcccCCcccc-----CHHHHHHHHHHhCCCEEEEcccc
Confidence 3589999999876421111 12467778888899999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.65 E-value=5.2e-16 Score=136.37 Aligned_cols=181 Identities=10% Similarity=0.094 Sum_probs=102.2
Q ss_pred CeeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhh-----------------------HHHHHHhhhh
Q 019979 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHR-----------------------WDTFGELVQP 191 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~-----------------------~~~~~~~~~~ 191 (333)
++||+++||+|.+.. ..++++.+...++|+||++||+++....... .+.+.+.++.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 589999999997643 2456666667799999999999975432110 0223444555
Q ss_pred hhc-CCceEEccCCCCCCCCCCccccccccccccc-cCcCCCCCCCCceEEEEeCCEEEEEEeccCCC-CCCHHHHH---
Q 019979 192 LAS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWK-MPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-DEYSDQYR--- 265 (333)
Q Consensus 192 l~~-~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-~~~~~q~~--- 265 (333)
+.. .+|+++++||||..... .+........ .|.- . .-.....+++++++|++++..... ....+++.
T Consensus 85 l~~~~~pv~~v~GNHD~~~~~----~~~~~~~~~~~~~~~--~-~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 157 (260)
T 2yvt_A 85 IGELGVKTFVVPGKNDAPLKI----FLRAAYEAETAYPNI--R-VLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYP 157 (260)
T ss_dssp HHTTCSEEEEECCTTSCCHHH----HHHHHHHTTTTCTTE--E-ECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEE
T ss_pred HHhcCCcEEEEcCCCCchhhh----hHHHHhhhccCCcce--E-EecCcceEEECCEEEEecCCCcCCCCcCHHHHhhcc
Confidence 544 48999999999984210 0001100000 0000 0 001122377889999999853210 11112221
Q ss_pred -HHH----HHhhcccCCCCCeEEEEeccccccCCCCCC--CCChhHHHHHHHHHHhCCCcEEEecCcc
Q 019979 266 -WLK----DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ--GEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (333)
Q Consensus 266 -WL~----~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~--~~~~~~~~~l~~l~~~~~v~lvl~GH~H 326 (333)
|+. +.|++.. + ...|+++|+|++....... .......+.+.+++++++++++++||+|
T Consensus 158 ~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 158 RWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp HHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred hhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 433 3333332 2 2469999999875311110 0001112567778888999999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2.2e-15 Score=137.68 Aligned_cols=187 Identities=13% Similarity=0.130 Sum_probs=100.0
Q ss_pred CCCeeEEEEeecCCC----CC-------------hhhHHHHhhcCCCCeEEcccc-ccccccc-hhhHHHHHHhhhhhhc
Q 019979 134 QFPITFAVAGDLGQT----GW-------------TKSTLDHIGQCKYDVHLLPGD-LSYADYM-QHRWDTFGELVQPLAS 194 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~----~~-------------~~~~~~~i~~~~~d~vl~~GD-l~~~~~~-~~~~~~~~~~~~~l~~ 194 (333)
...+||+++||+|.+ .. ...+++.+.+.+||+||++|| +++.... ......+.+.++.+..
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 467999999999966 21 123445556789999999999 7764432 2224455666666653
Q ss_pred CCceEEccCCCCCCCCCCccccccccccc----cccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC-------CCCHHH
Q 019979 195 ARPWMVTQGNHEKESIPLIMDAFQSYNAR----WKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-------DEYSDQ 263 (333)
Q Consensus 195 ~~P~~~~~GNHD~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-------~~~~~q 263 (333)
.+|+++++||||... . ..+..+... +....+.. ....+.++.+++.|++++..... ....+|
T Consensus 96 ~~pv~~i~GNHD~~~-~---~~~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~~~ 168 (336)
T 2q8u_A 96 TAPVVVLPGNHDWKG-L---KLFGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFF 168 (336)
T ss_dssp HSCEEECCC-------C---HHHHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEEEECCC-------CCSSHHHHH
T ss_pred cCCEEEECCCCCccc-c---ccHHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEEECCCCCHHHHHHHhhHHHHHH
Confidence 389999999999853 1 111112111 11111000 00011122356888888643211 112467
Q ss_pred HHHHHHHhhccc-CCCCCeEEEEeccccccCCCCCCCCChhH-HHHHHHHHHhCCCcEEEecCcccccc
Q 019979 264 YRWLKDDLSKVD-RKKTPWLLVLLHVPWYNSNEAHQGEGDGM-MAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 264 ~~WL~~~L~~~~-~~~~~~~iv~~H~P~~~~~~~~~~~~~~~-~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
++|+.+.|...- . ...++|+++|.|+....... ++.. . ...+...+.+.++|++++||+|..+.
T Consensus 169 ~~~~~~~l~~~~~~-~~~~~Ill~H~~~~~~~~~~-~~~~-~~~~~v~~~l~~~~~d~v~~GH~H~~~~ 234 (336)
T 2q8u_A 169 LESRLNKLYEEALK-KEDFAIFMGHFTVEGLAGYA-GIEQ-GREIIINRALIPSVVDYAALGHIHSFRE 234 (336)
T ss_dssp HHHHHHHHHHHHHT-CSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEESCSSCEE
T ss_pred HHHHHHHHHHhccC-CCCCEEEEECccccCCCCCC-Cccc-hhhcccCHHHccccCCEEEEccccCceE
Confidence 889888876531 1 23579999999986432110 0000 0 00011123346899999999998764
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=7.9e-13 Score=122.95 Aligned_cols=178 Identities=15% Similarity=-0.029 Sum_probs=97.6
Q ss_pred CCCeeEEEEeecCCCCC--------------hhhHHHHhhcCCCCeEEccccccccccc-hhhHHHHHHhhhhhhc-CCc
Q 019979 134 QFPITFAVAGDLGQTGW--------------TKSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARP 197 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------~~~~~~~i~~~~~d~vl~~GDl~~~~~~-~~~~~~~~~~~~~l~~-~~P 197 (333)
..++||+++||+|.+.. ..++++.+.+.+||+||++||+++.... ...+..+.+.++.+.. .+|
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 67799999999998742 1234555567899999999999875532 2344556667777754 389
Q ss_pred eEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCC
Q 019979 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRK 277 (333)
Q Consensus 198 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~ 277 (333)
+++++||||.............+......-. ....+..+-+++.+++++...... ..+..+||+..-.+..
T Consensus 98 v~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~~~~~-- 168 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGEESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNFESEAK-- 168 (386)
T ss_dssp EEECCCGGGSCSSTTSCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHHHHHHH--
T ss_pred EEEEcCCCCCCccccccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhhhhcc--
Confidence 9999999998532110000001111000000 011111111468888888643221 1233344432111111
Q ss_pred CCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
...+.|+++|.|+........... +.. +. ++|++++||+|...
T Consensus 169 ~~~~~Ill~H~~~~~~~~~~~~~~------~~~-l~--~~d~v~~GH~H~~~ 211 (386)
T 3av0_A 169 NYKKKILMLHQGINPYIPLDYELE------HFD-LP--KFSYYALGHIHKRI 211 (386)
T ss_dssp TCSSEEEEECCCCTTTSSSSCSSC------GGG-SC--CCSEEEECSCCSCE
T ss_pred cCCCEEEEECcCccccCCCCcccC------HHH-hh--hCCeEEccCCCCCc
Confidence 123589999998753211100000 001 11 39999999999764
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.5e-13 Score=120.56 Aligned_cols=184 Identities=14% Similarity=0.033 Sum_probs=100.5
Q ss_pred CCCeeEEEEeecCCCCChhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCc
Q 019979 134 QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~ 213 (333)
...+||+++||+|..... + .-.++|+||++||+++.+. ..+.+.+.+.++.+. ..++++++||||.......
T Consensus 57 ~~~mri~~iSD~H~~~~~---l---~i~~~D~vi~aGDl~~~g~-~~e~~~~~~~L~~l~-~~~v~~V~GNHD~~~d~~~ 128 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDG---I---QMPYGDILLHTGDFTELGL-PSEVKKFNDWLGNLP-YEYKIVIAGNHELTFDKEF 128 (296)
T ss_dssp TTEEEEEEEBCCTTCCTT---C---CCCSCSEEEECSCCSSSCC-HHHHHHHHHHHHTSC-CSEEEECCCTTCGGGCHHH
T ss_pred CCCeEEEEEeeCCCCcch---h---ccCCCCEEEECCcccCCCC-HHHHHHHHHHHHhCC-CCeEEEEcCCcccccchhh
Confidence 567999999999976432 1 2368999999999998554 334555555555542 2468999999999532110
Q ss_pred cc-----cccccccccccCcC---CC-CCCCCce----EEEEeCCEEEEEEeccCCCC---CCHHHHHHHHHHhhcccCC
Q 019979 214 MD-----AFQSYNARWKMPFE---ES-GSNSNLY----YSFDVAGAHLIMLGSYADYD---EYSDQYRWLKDDLSKVDRK 277 (333)
Q Consensus 214 ~~-----~~~~~~~~~~~p~~---~~-~~~~~~~----ys~~~g~v~fi~lds~~~~~---~~~~q~~WL~~~L~~~~~~ 277 (333)
.. .+..+...-..+.. .. .-..+.. -+..+++++|++..-...+. ...++.+++.+...+...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~~ip~- 207 (296)
T 3rl5_A 129 MADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPE- 207 (296)
T ss_dssp HHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHTTSCT-
T ss_pred hhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHhhCCC-
Confidence 00 00000000000000 00 0000111 24567889998855322111 111222344333443322
Q ss_pred CCCeEEEEeccccccCCCCCC-CCChhHHHHHHHHH-HhCCCcEEEecCcccc
Q 019979 278 KTPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLL-YAASVDLVLAGHVHAY 328 (333)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~-~~~~v~lvl~GH~H~y 328 (333)
+ ..|+++|.|++...+... .......+.+.+.+ ++.+++++++||+|..
T Consensus 208 ~--~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~ 258 (296)
T 3rl5_A 208 G--TDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEG 258 (296)
T ss_dssp T--CSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGG
T ss_pred C--CeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCC
Confidence 2 369999999987643210 00011225666666 6899999999999974
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-12 Score=120.95 Aligned_cols=185 Identities=14% Similarity=0.163 Sum_probs=101.3
Q ss_pred eeEEEEeecCCCCC----h-------------hhHHHHhhcCCCCeEEcccccc-ccccc-hhhHHHHHHhhhhhhcCCc
Q 019979 137 ITFAVAGDLGQTGW----T-------------KSTLDHIGQCKYDVHLLPGDLS-YADYM-QHRWDTFGELVQPLASARP 197 (333)
Q Consensus 137 ~~f~~~gD~~~~~~----~-------------~~~~~~i~~~~~d~vl~~GDl~-~~~~~-~~~~~~~~~~~~~l~~~~P 197 (333)
+||++++|+|.+.. . ..+++.+.+.+||+||++||++ +.... ...+..+.+.+..+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 58999999998654 1 2334444578999999999999 53322 3345556666666654489
Q ss_pred eEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEE--eC-CEEEEEEeccCCCC----CCHHHHHHHHHH
Q 019979 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD--VA-GAHLIMLGSYADYD----EYSDQYRWLKDD 270 (333)
Q Consensus 198 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~--~g-~v~fi~lds~~~~~----~~~~q~~WL~~~ 270 (333)
+++++||||..... -+...... ++.+.........+.+. .| .+.|..+.-..... ...++.+|+.+.
T Consensus 81 v~~i~GNHD~~~~~----~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~~l~~~ 154 (379)
T 3tho_B 81 VVVLPGNQDWKGLK----LFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESR 154 (379)
T ss_dssp EEECCCTTSCTTHH----HHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHHHHHHH
T ss_pred EEEEcCCCccccCc----cccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHHHHHHH
Confidence 99999999963210 01111110 11100000001112233 23 47777775322111 125678899888
Q ss_pred hh----cccCCCCCeEEEEeccccccCCCCCCCCChh-HHHHHHHHHHhCCCcEEEecCcccccc
Q 019979 271 LS----KVDRKKTPWLLVLLHVPWYNSNEAHQGEGDG-MMAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 271 L~----~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~-~~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
|+ +... ...+.|+++|.++...... +..+. ....+...+...++|++++||.|..+.
T Consensus 155 l~~~~~~~~~-~~~~~I~l~H~~v~g~~~~--~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~ 216 (379)
T 3tho_B 155 LNKLYEEALK-KEDFAIFMGHFTVEGLAGY--AGIEQGREIIINRALIPSVVDYAALGHIHSFRE 216 (379)
T ss_dssp HHHHHHHHHT-CSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCSSCEE
T ss_pred HHHHHHHhcC-CCCCeEEEEeccccCCccC--CCCccccccccCHHHcCcCCCEEEcccccCCeE
Confidence 87 2211 3346899999987543220 00000 000111112246899999999998753
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.3e-12 Score=114.22 Aligned_cols=169 Identities=9% Similarity=-0.012 Sum_probs=89.7
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhh---cC--CCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIG---QC--KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~---~~--~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~ 210 (333)
.+|+++||+|.... ..++++.+. .. ++|+||++||+++.+... ....+.+..+....|+++++||||....
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~---~~~~~~l~~l~~~~~~~~v~GNhD~~~~ 78 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYP---KEVIEVIKDLTKKENVKIIRGKYDQIIA 78 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCH---HHHHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCH---HHHHHHHHhhHhhcCeeEEecchHHHhh
Confidence 58999999996432 234556665 55 799999999999755322 1223344444333689999999997310
Q ss_pred CCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEec--cCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEecc
Q 019979 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS--YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (333)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds--~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (333)
. +...+. .. ..+ .. +++.... ... ........+|++||++........-...+|++.|+
T Consensus 79 ~--------~~~~~~-~~-~~~---~~---~~~~~~~---~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~ 139 (252)
T 1nnw_A 79 M--------SDPHAT-DP-GYI---DK---LELPGHV---KKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYG 139 (252)
T ss_dssp H--------SCTTCS-SS-GGG---GG---SSCCHHH---HHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESS
T ss_pred c--------cccccC-Cc-ccc---cc---hhhhHHH---HHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcC
Confidence 0 000000 00 000 00 0000000 000 00000135788898764332211001247888998
Q ss_pred ccccCC-CCCCCCChhHHHHHHHHHHhC-CCcEEEecCccccc
Q 019979 289 PWYNSN-EAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (333)
Q Consensus 289 P~~~~~-~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~ 329 (333)
+++... ...... ...+.+..+++++ +++++++||+|...
T Consensus 140 ~p~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~vi~GHtH~~~ 180 (252)
T 1nnw_A 140 SPINPFDGEVLAE--QPTSYYEAIMRPVKDYEMLIVASPMYPV 180 (252)
T ss_dssp CSSCTTTCCCCSS--CCHHHHHHHHGGGTTSSEEEESTTCSEE
T ss_pred CCCCCcccccCCC--CCHHHHHHHHhcCCCCCEEEECCccccc
Confidence 874322 111111 1235677888888 99999999999743
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.2e-11 Score=103.97 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=83.0
Q ss_pred eeEEEEeecCCCCCh--------------hhHHHHhhc--CCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEE
Q 019979 137 ITFAVAGDLGQTGWT--------------KSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMV 200 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~~~~i~~--~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~ 200 (333)
++++++||+|.+... +.+++.+.+ .++|+|+++||+++.+ ..+....+.++.+. .|++.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l~--~~~~~ 76 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKALP--GRKIL 76 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHSS--SEEEE
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHCC--CCEEE
Confidence 579999999975432 122334443 5899999999999753 22333344455443 58999
Q ss_pred ccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCC
Q 019979 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTP 280 (333)
Q Consensus 201 ~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~ 280 (333)
++||||... . .+...| -. +. +..||+ +. . .
T Consensus 77 v~GNhD~~~-----~---~~~~~~--------------~~----------l~----------~~~~l~----~~---~-~ 106 (195)
T 1xm7_A 77 VMGNHDKDK-----E---SLKEYF--------------DE----------IY----------DFYKII----EH---K-G 106 (195)
T ss_dssp ECCTTCCCH-----H---HHTTTC--------------SE----------EE----------SSEEEE----EE---T-T
T ss_pred EeCCCCCch-----h---hhhhhh--------------hc----------hh----------HHHHHH----hc---C-C
Confidence 999999831 0 111111 00 00 111221 11 1 2
Q ss_pred eEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 281 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
.+|+++|.|++....... ....+.+.+++++++++++++||+|...
T Consensus 107 ~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~ 152 (195)
T 1xm7_A 107 KRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNR 152 (195)
T ss_dssp EEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred cEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCC
Confidence 489999999876433221 1235788889999999999999999754
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.23 E-value=5.5e-11 Score=108.28 Aligned_cols=72 Identities=24% Similarity=0.230 Sum_probs=53.2
Q ss_pred eeEEEEeecCCCCCh--------------hhHHHHhhcCCCCeEEccccccccccc-hhhHHHHHHhhhhhhc-CCceEE
Q 019979 137 ITFAVAGDLGQTGWT--------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARPWMV 200 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~~~~i~~~~~d~vl~~GDl~~~~~~-~~~~~~~~~~~~~l~~-~~P~~~ 200 (333)
+||++++|+|.+... .++++.+.+.+||+||++||+++.... ...+..+.+.++.+.. .+|+++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 589999999987531 234455567899999999999975432 2345566667777754 489999
Q ss_pred ccCCCCCC
Q 019979 201 TQGNHEKE 208 (333)
Q Consensus 201 ~~GNHD~~ 208 (333)
++||||..
T Consensus 81 v~GNHD~~ 88 (333)
T 1ii7_A 81 IEGNHDRT 88 (333)
T ss_dssp ECCTTTCC
T ss_pred eCCcCCCc
Confidence 99999985
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.20 E-value=4.1e-11 Score=102.25 Aligned_cols=63 Identities=14% Similarity=0.216 Sum_probs=44.3
Q ss_pred CeeEEEEeecCCCCC---hhhHHHH-hhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 136 PITFAVAGDLGQTGW---TKSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~---~~~~~~~-i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
.+||+++||+|.... ..+.+.. +...++|+|+++||+++ ....+.++.+. .|++.++||||..
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~--------~~~l~~l~~~~--~~v~~V~GNHD~~ 91 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS--------QEYVEMLKNIT--KNVYIVSGDLDSA 91 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC--------HHHHHHHHHHC--SCEEECCCTTCCS
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC--------HHHHHHHHHcC--CCEEEecCCCcCc
Confidence 589999999997532 1233333 45678999999999985 12233344332 6899999999984
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=2.3e-11 Score=107.44 Aligned_cols=166 Identities=14% Similarity=0.072 Sum_probs=90.0
Q ss_pred CCCeeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCC
Q 019979 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~ 212 (333)
..+.|++++||+|.... ..++++.+...++|.|+++||+++.+.. .....+.++. ..|++.+.||||....
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~---~~~~~~~l~~---~~~~~~v~GNhD~~~~-- 80 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTG---RRRILDLLDQ---LPITARVLGNWEDSLW-- 80 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSC---SHHHHHHHHT---SCEEEECCCHHHHHHH--
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCC---HHHHHHHHHc---cCCEEEEcCChHHHHH--
Confidence 56799999999996532 2456667777789999999999975442 1223333333 2478999999997310
Q ss_pred ccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEecccccc
Q 019979 213 IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYN 292 (333)
Q Consensus 213 ~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 292 (333)
......+..+.. ...+.. . ...+..-....++++||+.........-....|++.|..+..
T Consensus 81 -----~~~~~~~~~~~~-----~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~ 141 (270)
T 3qfm_A 81 -----HGVRKELDSTRP-----SQRYLL----R-----QCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDK 141 (270)
T ss_dssp -----HHHTTCSCTTSH-----HHHHHH----H-----HHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTB
T ss_pred -----HhhccccCCCcH-----HHHHHH----H-----HHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCC
Confidence 000000000000 000000 0 000001123578899988654432111112468888866543
Q ss_pred CCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccc
Q 019979 293 SNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327 (333)
Q Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 327 (333)
...... ......+.+..++++.+++++++||+|.
T Consensus 142 ~~~~~~-~~~~~~~~l~~~~~~~~~d~~i~GHtH~ 175 (270)
T 3qfm_A 142 NWGREL-IHTGKQEEFDRLVTHPPCDIAVYGHIHQ 175 (270)
T ss_dssp SSSSTT-STTCCHHHHHHTTTTTTCSEEECCSSCS
T ss_pred CCCcee-cCCCcHHHHHHHhcccCCCEEEECCcCc
Confidence 211110 0011235677777788999999999995
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-10 Score=95.23 Aligned_cols=64 Identities=17% Similarity=0.200 Sum_probs=42.5
Q ss_pred CCeeEEEEeecCCCCC---hhhHHHH-hhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 135 FPITFAVAGDLGQTGW---TKSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~---~~~~~~~-i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
..+||+++||+|.... ..+.+.. +...++|+|+++||+++ . ...+.++.+. .|++.++||||..
T Consensus 9 ~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~----~----~~~~~l~~~~--~~~~~v~GNhD~~ 76 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT----K----ESYDYLKTLA--GDVHIVRGDFDEN 76 (192)
T ss_dssp --CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS----H----HHHHHHHHHC--SEEEECCCTTCCC
T ss_pred cceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC----H----HHHHHHHhcC--CCEEEEcCCcCcc
Confidence 3479999999997532 1233333 34567999999999984 1 1223333332 5899999999984
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.4e-11 Score=107.36 Aligned_cols=151 Identities=16% Similarity=0.131 Sum_probs=85.5
Q ss_pred CCeeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCc
Q 019979 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~ 213 (333)
..+|++++||+|.... ..++++.+. ++|.++++||+++.+... ....+.+..+. +++.+.||||.......
T Consensus 2 ~~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~---~~~~~~l~~~~---~~~~v~GNhD~~~~~~~ 73 (246)
T 3rqz_A 2 NAMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRP---RECVELVRVLA---PNISVIGNHDWACIGRL 73 (246)
T ss_dssp CCCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCH---HHHHHHHHHHC---SSEECCCHHHHHHTCCC
T ss_pred CCcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCH---HHHHHHHHhcC---CCEEEeCchHHHHhccC
Confidence 4589999999995421 133445554 899999999999755421 22233333332 36889999998421100
Q ss_pred cccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccC
Q 019979 214 MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNS 293 (333)
Q Consensus 214 ~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~ 293 (333)
... .+.... .....| .......++++||++....... + .|++.|.++...
T Consensus 74 --~~~----~~~~~~----~~~~~~----------------~~~~l~~~~~~~L~~lp~~~~~-~---~i~~~Hg~p~~~ 123 (246)
T 3rqz_A 74 --SLD----EFNPVA----RFASYW----------------TTMQLQAEHLQYLESLPNRMID-G---DWTVVHGSPRHP 123 (246)
T ss_dssp --CCC------CGGG----GCHHHH----------------HHHHCCHHHHHHHHHCCSEEEE-T---TEEEESSCSSST
T ss_pred --Ccc----ccCHHH----HHHHHH----------------HHHHcCHHHHHHHHhCCcEEEE-C---CEEEEECCcCCc
Confidence 000 000000 000000 0001247889999865443321 1 477888876543
Q ss_pred CCCCCCCChhHHHHHHHHHHhCCCcEEEecCccc
Q 019979 294 NEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327 (333)
Q Consensus 294 ~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 327 (333)
... .... ...+.+++++++++++|+||+|.
T Consensus 124 ~~~-~~~~---~~~~~~~l~~~~~~l~i~GHtH~ 153 (246)
T 3rqz_A 124 IWE-YIYN---ARIAALNFPAFDTPLCFVGHTHV 153 (246)
T ss_dssp TTC-CCCS---HHHHHHHGGGCCSSEEECCSSSS
T ss_pred ccc-ccCC---hHHHHHHHhccCCCEEEECCcCc
Confidence 211 1111 25677888999999999999996
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.13 E-value=4.5e-10 Score=104.31 Aligned_cols=76 Identities=18% Similarity=0.160 Sum_probs=52.2
Q ss_pred CCCCeeEEEEeecCCCCC---------h----hhHHHHhhcCCCCeEEccccccccccc-hhhHHHHHHhhhh-------
Q 019979 133 AQFPITFAVAGDLGQTGW---------T----KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQP------- 191 (333)
Q Consensus 133 ~~~~~~f~~~gD~~~~~~---------~----~~~~~~i~~~~~d~vl~~GDl~~~~~~-~~~~~~~~~~~~~------- 191 (333)
....+||++++|+|.+.. . .++++.+.+.+||+||++||+++.... ......+.+.++.
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~ 89 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKP 89 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCC
T ss_pred CCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCc
Confidence 367899999999998642 1 345566668899999999999976543 1222233333322
Q ss_pred -----h----------------------hcCCceEEccCCCCCC
Q 019979 192 -----L----------------------ASARPWMVTQGNHEKE 208 (333)
Q Consensus 192 -----l----------------------~~~~P~~~~~GNHD~~ 208 (333)
| ...+|++++.||||..
T Consensus 90 ~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~ 133 (417)
T 4fbw_A 90 CELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 133 (417)
T ss_dssp CCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-
T ss_pred ccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCc
Confidence 2 1258999999999985
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.13 E-value=2e-10 Score=95.96 Aligned_cols=63 Identities=13% Similarity=0.135 Sum_probs=44.6
Q ss_pred CeeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
.+||+++||+|.... ..++++.+...++|+|+++||+++. ...+.++.+ ..|+++++||||..
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIATYGNNDGE 88 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEEECCTTCCC
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEeCCCcch
Confidence 389999999994321 1345566666899999999999852 123333333 37999999999984
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.13 E-value=6.5e-10 Score=91.66 Aligned_cols=112 Identities=18% Similarity=0.153 Sum_probs=72.3
Q ss_pred CeeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCcc
Q 019979 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~ 214 (333)
..|++++||+|.... ..++++.+.+ ++|+|+++||+.. +.++.+. .|++.++||||...
T Consensus 6 ~m~i~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~------------~~l~~l~--~~~~~v~GNhD~~~----- 65 (176)
T 3ck2_A 6 KQTIIVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSEL------------RPDSPLW--EGIRVVKGNMDFYA----- 65 (176)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCS------------CTTCGGG--TTEEECCCTTCCST-----
T ss_pred CcEEEEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCch------------HHHHhhh--CCeEEecCcccchh-----
Confidence 479999999995321 1344455544 8999999999842 1223333 28999999999831
Q ss_pred ccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCC
Q 019979 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (333)
Q Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (333)
..|. ...+ +. ...+|+++|.|++...
T Consensus 66 ----------~~p~---------~~~~-------------------------------~~----~~~~i~~~Hg~~~~~~ 91 (176)
T 3ck2_A 66 ----------GYPE---------RLVT-------------------------------EL----GSTKIIQTHGHLFDIN 91 (176)
T ss_dssp ----------TCCS---------EEEE-------------------------------EE----TTEEEEEECSGGGTTT
T ss_pred ----------cCCc---------EEEE-------------------------------EE----CCeEEEEECCCccCCC
Confidence 0121 0000 00 1247899999886432
Q ss_pred CCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 295 EAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 295 ~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
. + .+.+.+++++++++++++||+|...
T Consensus 92 ~-----~---~~~l~~~~~~~~~d~vi~GHtH~~~ 118 (176)
T 3ck2_A 92 F-----N---FQKLDYWAQEEEAAICLYGHLHVPS 118 (176)
T ss_dssp T-----C---SHHHHHHHHHTTCSEEECCSSCCEE
T ss_pred C-----C---HHHHHHHHHhcCCCEEEECCcCCCC
Confidence 1 1 1456777888999999999999753
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.3e-09 Score=102.10 Aligned_cols=75 Identities=19% Similarity=0.157 Sum_probs=52.6
Q ss_pred CCCeeEEEEeecCCCCCh-------------hhHHHHhhcCCCCeEEccccccccccc-hhhHHHHHHhhhh--------
Q 019979 134 QFPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQP-------- 191 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vl~~GDl~~~~~~-~~~~~~~~~~~~~-------- 191 (333)
...+||++++|+|.+... .++++.+.+.+||+||++||+++.... ......+.+.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~~ 153 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPC 153 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCCC
T ss_pred CCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcc
Confidence 678999999999986421 345666678999999999999976543 1222223333322
Q ss_pred ----h----------------------hcCCceEEccCCCCCC
Q 019979 192 ----L----------------------ASARPWMVTQGNHEKE 208 (333)
Q Consensus 192 ----l----------------------~~~~P~~~~~GNHD~~ 208 (333)
| ...+|++++.||||..
T Consensus 154 ~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 154 ELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred hheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 1258999999999985
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.7e-09 Score=98.56 Aligned_cols=77 Identities=22% Similarity=0.216 Sum_probs=55.4
Q ss_pred CCCCCeeEEEEeecCCCCCh-------------hhHHHHhhcCCCCeEEccccccccccc-hhhHHHHHHhhhhhh----
Q 019979 132 PAQFPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLA---- 193 (333)
Q Consensus 132 p~~~~~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vl~~GDl~~~~~~-~~~~~~~~~~~~~l~---- 193 (333)
+....+||++++|+|.+... ..+++.+.+.+||+||++||+++.... ......+.+.++.+.
T Consensus 28 ~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~ 107 (431)
T 3t1i_A 28 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDR 107 (431)
T ss_dssp CGGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSS
T ss_pred CCCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCC
Confidence 33678999999999976421 345566668899999999999976543 233444555555431
Q ss_pred ------------------------------cCCceEEccCCCCCC
Q 019979 194 ------------------------------SARPWMVTQGNHEKE 208 (333)
Q Consensus 194 ------------------------------~~~P~~~~~GNHD~~ 208 (333)
..+|++.+.||||..
T Consensus 108 ~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 108 PVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp CCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred cccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 259999999999985
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.03 E-value=3e-09 Score=87.85 Aligned_cols=62 Identities=15% Similarity=0.037 Sum_probs=43.3
Q ss_pred CCeeEEEEeecCCCC---ChhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCC
Q 019979 135 FPITFAVAGDLGQTG---WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~---~~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~ 207 (333)
..+|++++||+|... ...++++.+. .++|+|+++||+++. ...+.++.+. .|++.++||||.
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~~~--~~v~~V~GNhD~ 85 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL--------DTVILLEKFS--KEFYGVHGNMDY 85 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH--------HHHHHHHHHT--SSEEECCCSSSC
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH--------HHHHHHHhcC--CCEEEEECCCCc
Confidence 347999999999421 2235556554 789999999999851 2233333332 699999999998
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.91 E-value=2.1e-09 Score=104.33 Aligned_cols=172 Identities=18% Similarity=0.155 Sum_probs=92.4
Q ss_pred CCCeeEEEEeecCCCC--C----------------hhhHHHHhhcCCCC-eEEccccccccccchh--hHHHHHHhhhhh
Q 019979 134 QFPITFAVAGDLGQTG--W----------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELVQPL 192 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~--~----------------~~~~~~~i~~~~~d-~vl~~GDl~~~~~~~~--~~~~~~~~~~~l 192 (333)
...++|++++|+|..- . ....++++++.+|| +++.+||++....... ......+.+..+
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~l 106 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRL 106 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHT
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhc
Confidence 5679999999998531 1 13456666677787 8999999986433111 112222333333
Q ss_pred hcCCceEEccCCCCCCCCCCccccccccccccccCcCC-----CC-----CCCCceEEEEeCC--EEEEEEeccC-----
Q 019979 193 ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEE-----SG-----SNSNLYYSFDVAG--AHLIMLGSYA----- 255 (333)
Q Consensus 193 ~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~-----~~-----~~~~~~ys~~~g~--v~fi~lds~~----- 255 (333)
-+-+.++||||+.... +.+..+.+....|.-. .. .....|..++.++ +.|+.+.+..
T Consensus 107 ---g~d~~~lGNHEfd~g~---~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~ 180 (552)
T 2z1a_A 107 ---RYRAMALGNHEFDLGP---GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREIS 180 (552)
T ss_dssp ---TCCEEECCGGGGTTCH---HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHS
T ss_pred ---CCCccccccccccCCH---HHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhcc
Confidence 2447789999995321 1122222221111100 00 0123566788887 5555555421
Q ss_pred CCC------CCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHh-CCCcEEEecCcccc
Q 019979 256 DYD------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAY 328 (333)
Q Consensus 256 ~~~------~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 328 (333)
... ...++.+...+.|++ ++...+|+++|.|... + ..+.++ .+||++|+||.|..
T Consensus 181 ~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~-------------d--~~la~~~~gvDlIlgGHtH~~ 242 (552)
T 2z1a_A 181 NPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE-------------D--LKLARRLVGVQVIVGGHSHTL 242 (552)
T ss_dssp CCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH-------------H--HHHHTTCSSCCEEEECSSCCC
T ss_pred CCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcch-------------H--HHHHHhCCCccEEEeCCcCcc
Confidence 000 011333333334443 2455699999998532 0 122333 48999999999975
Q ss_pred c
Q 019979 329 E 329 (333)
Q Consensus 329 ~ 329 (333)
.
T Consensus 243 ~ 243 (552)
T 2z1a_A 243 L 243 (552)
T ss_dssp B
T ss_pred c
Confidence 4
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.89 E-value=2.6e-09 Score=102.88 Aligned_cols=185 Identities=18% Similarity=0.176 Sum_probs=94.0
Q ss_pred CCCeeEEEEeecCCCCCh-----------hhHHHHhhcC----CC-CeEEccccccccccch--hhHHHHHHhhhhhhcC
Q 019979 134 QFPITFAVAGDLGQTGWT-----------KSTLDHIGQC----KY-DVHLLPGDLSYADYMQ--HRWDTFGELVQPLASA 195 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-----------~~~~~~i~~~----~~-d~vl~~GDl~~~~~~~--~~~~~~~~~~~~l~~~ 195 (333)
...++|++++|+|..... ...++++++. ++ +++|.+||++...... ...+...+.+..+.
T Consensus 6 ~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg-- 83 (516)
T 1hp1_A 6 TYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG-- 83 (516)
T ss_dssp CEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT--
T ss_pred ceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC--
Confidence 356899999999875321 2345555432 46 7999999998532211 11223334444443
Q ss_pred CceEEccCCCCCCCCCCccccccccccccccCc---C----CCC-CCCCceEEEEeCC--EEEEEEeccCC--CCC----
Q 019979 196 RPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESG-SNSNLYYSFDVAG--AHLIMLGSYAD--YDE---- 259 (333)
Q Consensus 196 ~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~~-~~~~~~ys~~~g~--v~fi~lds~~~--~~~---- 259 (333)
+-++++||||+.... ..+....+....|. | ..+ .....|..++.++ +.|+.+.+... +..
T Consensus 84 -~d~~~~GNHEfd~g~---~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~ 159 (516)
T 1hp1_A 84 -YDAMAIGNHEFDNPL---TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYF 159 (516)
T ss_dssp -CCEEECCGGGGSSCH---HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSC
T ss_pred -CCEEeeccccccCCH---HHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCcc
Confidence 346789999995321 11111111111111 1 000 0123456678887 45555654321 110
Q ss_pred -------CHH-HHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 260 -------YSD-QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 260 -------~~~-q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
..+ ..+|+++ |++. .+...+|+++|.|....... +........+...+...+||++|+||.|...
T Consensus 160 ~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~~~~~~~--~~~~~~~~~la~~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 160 TDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGHYDNGEH--GSNAPGDVEMARALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp TTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCCCGGGCC--TTSCCCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred CCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCccCCCcc--cccCchHHHHHHhCCCCceeEEECCCCCccc
Confidence 012 2234433 3321 14567999999997543221 1110111233333334459999999999753
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.78 E-value=2.3e-08 Score=96.51 Aligned_cols=185 Identities=16% Similarity=0.187 Sum_probs=93.1
Q ss_pred CCCeeEEEEeecCCCCC-----------------hhhHHHHhhcCCCC-eEEccccccccccchhh-------HHHHHHh
Q 019979 134 QFPITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHR-------WDTFGEL 188 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-----------------~~~~~~~i~~~~~d-~vl~~GDl~~~~~~~~~-------~~~~~~~ 188 (333)
...++|+.++|+|..-. ....++++++..++ ++|.+||++........ .....+.
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ 96 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDF 96 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHH
Confidence 46799999999985321 12456666666776 67889999964322110 1222333
Q ss_pred hhhhhcCCceEEccCCCCCCCCCCccccccccccccccCcCCC-----C--CCCCceEEEEeCCEE--EEEEeccC--CC
Q 019979 189 VQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEES-----G--SNSNLYYSFDVAGAH--LIMLGSYA--DY 257 (333)
Q Consensus 189 ~~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~-----~--~~~~~~ys~~~g~v~--fi~lds~~--~~ 257 (333)
+..+ -+-+.++||||+.... +.+..+.+....|.-.. + .....|..++.++++ ||.+.+.. .+
T Consensus 97 ln~l---g~D~~t~GNHefd~G~---~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~ 170 (527)
T 3qfk_A 97 YNRM---AFDFGTLGNHEFNYGL---PYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHW 170 (527)
T ss_dssp HHHT---CCCEECCCGGGGTTCH---HHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGT
T ss_pred HHhc---CCcEEeccccccccCH---HHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccc
Confidence 3333 2335679999985321 12222222222221100 0 011346677888854 55554421 11
Q ss_pred CC--------CHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCC-C-----CCCCChhHHHHHHHHHHhCCCcEEEec
Q 019979 258 DE--------YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE-A-----HQGEGDGMMAIMEPLLYAASVDLVLAG 323 (333)
Q Consensus 258 ~~--------~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~-~-----~~~~~~~~~~~l~~l~~~~~v~lvl~G 323 (333)
.. ..+..+.+++.+++.+ ++...+|+++|.+...... . ..++.. ...+..-+ ..+||++|+|
T Consensus 171 ~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~--~~~la~~~-~~giDlIlgG 246 (527)
T 3qfk_A 171 EQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE--GYAMLEAF-SKDIDIFITG 246 (527)
T ss_dssp SCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC--HHHHHHHH-GGGCSEEECC
T ss_pred cCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH--HHHHHHhc-CCCCcEEEEC
Confidence 11 0122334444444333 2456799999987543211 0 011111 11222222 2489999999
Q ss_pred Ccccc
Q 019979 324 HVHAY 328 (333)
Q Consensus 324 H~H~y 328 (333)
|.|..
T Consensus 247 HtH~~ 251 (527)
T 3qfk_A 247 HQHRQ 251 (527)
T ss_dssp SSCCE
T ss_pred CCCcc
Confidence 99974
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=2.1e-08 Score=97.22 Aligned_cols=175 Identities=15% Similarity=0.153 Sum_probs=92.7
Q ss_pred CCCeeEEEEeecCCCCC---------------------hhhHHHHhhcCCC-CeEEccccccccccch--hhHHHHHHhh
Q 019979 134 QFPITFAVAGDLGQTGW---------------------TKSTLDHIGQCKY-DVHLLPGDLSYADYMQ--HRWDTFGELV 189 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~---------------------~~~~~~~i~~~~~-d~vl~~GDl~~~~~~~--~~~~~~~~~~ 189 (333)
...++|+.++|+|..-. ....++++++.++ +++|.+||++...... .......+.+
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 45699999999985311 1235566666666 5999999999644321 1122233344
Q ss_pred hhhhcCCceEEccCCCCCCCCCCcccccc-ccccccccCcCCCC---C---------CCCceEEEEeCCEEE--EEEecc
Q 019979 190 QPLASARPWMVTQGNHEKESIPLIMDAFQ-SYNARWKMPFEESG---S---------NSNLYYSFDVAGAHL--IMLGSY 254 (333)
Q Consensus 190 ~~l~~~~P~~~~~GNHD~~~~~~~~~~~~-~~~~~~~~p~~~~~---~---------~~~~~ys~~~g~v~f--i~lds~ 254 (333)
..+. +-++++||||+.... +... .+.+....|.-... . ....|..++.+++++ |.+.+.
T Consensus 103 n~lg---~d~~~~GNHEfd~g~---~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~~~ 176 (546)
T 4h2g_A 103 NALR---YDAMALGNHEFDNGV---EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSK 176 (546)
T ss_dssp HHHT---CSEEECCGGGGTTHH---HHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEECT
T ss_pred HhcC---CcEEeccCcccccCH---HHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEeccc
Confidence 4433 335789999985321 1122 22222222211000 0 124566788888554 444431
Q ss_pred C-----CCC-C--CHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHh-CCCcEEEecCc
Q 019979 255 A-----DYD-E--YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHV 325 (333)
Q Consensus 255 ~-----~~~-~--~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~ 325 (333)
. ... . ..+..+.+++.+++.+.++...+|+++|.+... ... +.++ .+||++|+||.
T Consensus 177 ~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~------------d~~---la~~~~giDlIlgGHt 241 (546)
T 4h2g_A 177 ETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM------------DKL---IAQKVRGVDVVVGGHS 241 (546)
T ss_dssp THHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH------------HHH---HHHHSTTCCEEECCSS
T ss_pred ccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc------------hHH---HHHhCCCCcEEEeCCc
Confidence 1 000 0 012233444444443323466799999987531 112 2223 38999999999
Q ss_pred cccc
Q 019979 326 HAYE 329 (333)
Q Consensus 326 H~y~ 329 (333)
|...
T Consensus 242 H~~~ 245 (546)
T 4h2g_A 242 NTFL 245 (546)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 9853
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=6.6e-08 Score=92.89 Aligned_cols=186 Identities=17% Similarity=0.166 Sum_probs=92.2
Q ss_pred CCeeEEEEeecCCCCC-------------------hhhHHHHhhcCCCCeEEc-cccccccccchhhHHHHHHhhhhhhc
Q 019979 135 FPITFAVAGDLGQTGW-------------------TKSTLDHIGQCKYDVHLL-PGDLSYADYMQHRWDTFGELVQPLAS 194 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~-------------------~~~~~~~i~~~~~d~vl~-~GDl~~~~~~~~~~~~~~~~~~~l~~ 194 (333)
..++|+.++|+|..-. ....++++++.+++.+++ +||++..... ..+......++.+..
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~-~~~~~g~~~~~~ln~ 83 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI-SSLTKGKAIIDIMNT 83 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-HHTTTTHHHHHHHTT
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-hhhcCChHHHHHHHh
Confidence 4689999999984311 033566666778887766 9999863211 111111112222322
Q ss_pred CCceEEccCCCCCCCCCCccccccccccccccCc---C----CCC-CC-CCceEEEEeCCE--EEEEEecc-----CCCC
Q 019979 195 ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESG-SN-SNLYYSFDVAGA--HLIMLGSY-----ADYD 258 (333)
Q Consensus 195 ~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~~-~~-~~~~ys~~~g~v--~fi~lds~-----~~~~ 258 (333)
.-+-++++||||+.... ..+..+.+....|. | ..+ .. ...|..++.+++ -||.+-+. ..+.
T Consensus 84 lg~D~~tlGNHEfd~G~---~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~~~ 160 (509)
T 3ive_A 84 MPFDAVTIGNHEFDHGW---DNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSA 160 (509)
T ss_dssp SCCSEECCCGGGGTTCH---HHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHHHSCG
T ss_pred cCCcEEeecccccccCH---HHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCccccccccc
Confidence 23456789999985321 11222222211121 0 001 11 244666788885 45555321 0000
Q ss_pred ---C---CHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCC----CChhHHHHHHHHHHh-CCCcEEEecCccc
Q 019979 259 ---E---YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG----EGDGMMAIMEPLLYA-ASVDLVLAGHVHA 327 (333)
Q Consensus 259 ---~---~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~----~~~~~~~~l~~l~~~-~~v~lvl~GH~H~ 327 (333)
. ..+..+.+++.+++.+. +...+|+++|.+.......... ...... ..+.++ .+||++|+||.|.
T Consensus 161 ~~~~g~~~~d~~~~~~~~v~~Lk~-~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDlIlgGHtH~ 236 (509)
T 3ive_A 161 ATRVGIEARDEIKWLQRYIDELKG-KVDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDILITGHAHV 236 (509)
T ss_dssp GGCTTEEECCHHHHHHHHHHHHTT-TCSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCEEEEESSCC
T ss_pred ccCCCCEEcCHHHHHHHHHHHHHh-cCCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcEEEeCCcCc
Confidence 0 12233445555554443 3667999999875321111000 001111 233344 3799999999997
Q ss_pred c
Q 019979 328 Y 328 (333)
Q Consensus 328 y 328 (333)
.
T Consensus 237 ~ 237 (509)
T 3ive_A 237 G 237 (509)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.65 E-value=2.4e-07 Score=89.86 Aligned_cols=150 Identities=13% Similarity=0.032 Sum_probs=77.0
Q ss_pred HHHHhhcC--C--CC-eEEccccccccccchhh---HHHHHHhhhhhhcCCceEEccCCCCCCCCCCccccccccccccc
Q 019979 154 TLDHIGQC--K--YD-VHLLPGDLSYADYMQHR---WDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWK 225 (333)
Q Consensus 154 ~~~~i~~~--~--~d-~vl~~GDl~~~~~~~~~---~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~ 225 (333)
.++++++. + || ++|.+||++..... .. .+...+.+..+. .+++ + ||||+.... +.+..+.+...
T Consensus 110 ~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~-~~~~~g~~~~~~ln~lg--~d~~-~-GNHEfd~G~---~~l~~~l~~~~ 181 (562)
T 2wdc_A 110 LIRDQKARVEAEGGKALVLDGGDTWTNSGL-SLLTRGEAVVRWQNLVG--VDHM-V-SHWEWTLGR---ERVEELLGLFR 181 (562)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSSSHH-HHHHTTHHHHHHHHHHT--CCEE-C-CSGGGGGCH---HHHHHHHHHCC
T ss_pred HHHHHHhhhhcCCCCEEEEeCCCCCCcchh-hhhhCCHHHHHHHHhhC--CcEE-e-cchhcccCH---HHHHHHHHhCC
Confidence 44555443 4 88 89999999964331 11 223334455443 5665 6 999984321 12222222222
Q ss_pred cCcCC-------CC-CCCCceEEEEeCCE--EEEEEeccC-----------C--CCCCHHHHHHHHHHhhcccCCCCCeE
Q 019979 226 MPFEE-------SG-SNSNLYYSFDVAGA--HLIMLGSYA-----------D--YDEYSDQYRWLKDDLSKVDRKKTPWL 282 (333)
Q Consensus 226 ~p~~~-------~~-~~~~~~ys~~~g~v--~fi~lds~~-----------~--~~~~~~q~~WL~~~L~~~~~~~~~~~ 282 (333)
.|.-. .+ .....|..++.+++ -||.+.+.. . +....+..+-..+.|++ ++...+
T Consensus 182 ~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~i 258 (562)
T 2wdc_A 182 GEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAV 258 (562)
T ss_dssp SEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEE
T ss_pred CCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEE
Confidence 22110 00 01234556788874 555554321 0 11112332222223433 245679
Q ss_pred EEEeccccccCCCCCCCCChhHHHHHHHHHHh-CCCcEEEecCccccc
Q 019979 283 LVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAYE 329 (333)
Q Consensus 283 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y~ 329 (333)
|+++|.|... . ..+.++ .+||++|+||.|...
T Consensus 259 IvLsH~g~~~------------d---~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 259 VLLSHNGMQL------------D---AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp EEEECSCHHH------------H---HHHHTTSSSCCEEEECSSCCCC
T ss_pred EEEeCCCCcc------------h---HHHHhcCCCCcEEEeCCCCCCC
Confidence 9999998531 0 123334 489999999999753
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=2e-07 Score=90.85 Aligned_cols=174 Identities=14% Similarity=0.129 Sum_probs=91.6
Q ss_pred CCeeEEEEeecCCCCCh----------------------hhHHHHhhcCCCC-eEEccccccccccch--hhHHHHHHhh
Q 019979 135 FPITFAVAGDLGQTGWT----------------------KSTLDHIGQCKYD-VHLLPGDLSYADYMQ--HRWDTFGELV 189 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~~----------------------~~~~~~i~~~~~d-~vl~~GDl~~~~~~~--~~~~~~~~~~ 189 (333)
-.++|+.++|+|..-.. ...++++++.+++ ++|.+||++...... .......+.+
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 90 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVM 90 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHH
Confidence 45899999999843111 2355566666666 899999999643211 1122233344
Q ss_pred hhhhcCCceEEccCCCCCCCCCCccccccccccccccCc---C---CCCC----CCCceEEEEeCCE--EEEEEec-c--
Q 019979 190 QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E---ESGS----NSNLYYSFDVAGA--HLIMLGS-Y-- 254 (333)
Q Consensus 190 ~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~---~~~~----~~~~~ys~~~g~v--~fi~lds-~-- 254 (333)
..+. +-++++||||+.... +.+..+.+....|. | ..+. .-..|..++.+++ -||.+.+ .
T Consensus 91 n~lg---~D~~tlGNHEfd~G~---~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~~~~~ 164 (579)
T 3ztv_A 91 NAGN---FHYFTLGNHEFDAGN---EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTVNKT 164 (579)
T ss_dssp HHHT---CSEEECCSGGGTTHH---HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEECSHHH
T ss_pred HhcC---cCeeeccccccccCH---HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEcCCcc
Confidence 4332 335689999985321 12222222222221 0 0011 1134566788874 5556633 1
Q ss_pred ---CCCCCC---HHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHh-CCCcEEEecCccc
Q 019979 255 ---ADYDEY---SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHA 327 (333)
Q Consensus 255 ---~~~~~~---~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~ 327 (333)
.....+ .+..+-+++.+++.+.++...+|+++|.+... .. .+.++ .+||++|+||.|.
T Consensus 165 ~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~---~la~~~~giDlIlgGHtH~ 229 (579)
T 3ztv_A 165 VNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NI---EIAQKVNDIDVIVTGDSHY 229 (579)
T ss_dssp HHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HH---HHHHHCSSCCEEEECSSCC
T ss_pred ccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hH---HHHHhCCCCCEEEeCCCCc
Confidence 111110 12233444444444333466799999987421 11 22233 3799999999998
Q ss_pred cc
Q 019979 328 YE 329 (333)
Q Consensus 328 y~ 329 (333)
..
T Consensus 230 ~~ 231 (579)
T 3ztv_A 230 LY 231 (579)
T ss_dssp EE
T ss_pred cc
Confidence 64
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.48 E-value=1.5e-06 Score=84.15 Aligned_cols=180 Identities=16% Similarity=0.179 Sum_probs=89.5
Q ss_pred CCCeeEEEEeecCCCCC--------------hhhHHHHhh----cCCCC-eEEccccccccccchh----hHHHHHHhhh
Q 019979 134 QFPITFAVAGDLGQTGW--------------TKSTLDHIG----QCKYD-VHLLPGDLSYADYMQH----RWDTFGELVQ 190 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------~~~~~~~i~----~~~~d-~vl~~GDl~~~~~~~~----~~~~~~~~~~ 190 (333)
...++|+.++|+|..-. ..++...++ +.+++ ++|.+||++....... ..+...+.+.
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 56799999999986421 122233332 36788 5799999995432111 1111122333
Q ss_pred hhhcCCceEEccCCCCCCCCCCccccccccccccccCc---C-----CCCC---CCCceEEEEe--CCEEEEEEeccCCC
Q 019979 191 PLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E-----ESGS---NSNLYYSFDV--AGAHLIMLGSYADY 257 (333)
Q Consensus 191 ~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~-----~~~~---~~~~~ys~~~--g~v~fi~lds~~~~ 257 (333)
.+ -.=+.++||||+......-..+....+....|. | ..+. ....|..++. +++++-++.-...+
T Consensus 93 ~l---g~Da~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt~~~ 169 (557)
T 3c9f_A 93 KQ---DYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDF 169 (557)
T ss_dssp TS---CCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCC
T ss_pred hc---CCCEEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEeecCC
Confidence 22 233568999999632110001111111122221 1 0010 1234556787 77555554432222
Q ss_pred CC--------CHHH--H-HHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHh--CCCc-EEEec
Q 019979 258 DE--------YSDQ--Y-RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA--ASVD-LVLAG 323 (333)
Q Consensus 258 ~~--------~~~q--~-~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~--~~v~-lvl~G 323 (333)
.. ...+ . +|+++.++ ++...+|+++|.+..... .. . ......+.+ .++| ++|+|
T Consensus 170 ~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~------d~-~-~~~~~~lA~~~~giDilIlgG 237 (557)
T 3c9f_A 170 KRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW------GE-F-YQVHQYLRQFFPDTIIQYFGG 237 (557)
T ss_dssp CCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT------CH-H-HHHHHHHHHHCTTSEEEEEEC
T ss_pred CCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC------cc-c-cHHHHHHHHhCCCCCEEEECC
Confidence 11 1111 2 46665543 256779999998862100 11 1 222222333 4899 49999
Q ss_pred Ccccc
Q 019979 324 HVHAY 328 (333)
Q Consensus 324 H~H~y 328 (333)
|.|..
T Consensus 238 HtH~~ 242 (557)
T 3c9f_A 238 HSHIR 242 (557)
T ss_dssp SSCCE
T ss_pred CCCCC
Confidence 99985
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.42 E-value=1.9e-06 Score=78.25 Aligned_cols=46 Identities=17% Similarity=0.279 Sum_probs=27.5
Q ss_pred CCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHh-CCCcEEEecCcccc
Q 019979 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAY 328 (333)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 328 (333)
+...+|+++|............++. ... +.++ .+||++|.||.|..
T Consensus 207 g~D~II~l~H~G~~~d~~~~~~e~~--~~~---lA~~v~giD~IigGHsH~~ 253 (341)
T 3gve_A 207 GADVIIALAHTGIEKQAQSSGAENA--VFD---LATKTKGIDAIISGHQHGL 253 (341)
T ss_dssp TCSEEEEEECCCCCSSCCCTTCSSC--HHH---HHHHCSCCCEEEECSSCCE
T ss_pred CCCEEEEEeccCccccccccccchh--HHH---HHhcCCCCcEEEECCCCcc
Confidence 5678999999876432111111111 112 2223 48999999999985
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.33 E-value=1.1e-05 Score=70.78 Aligned_cols=170 Identities=12% Similarity=0.087 Sum_probs=90.4
Q ss_pred CeeEEEEeecCCCCCh---hhHHHHhhcC-CCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCC
Q 019979 136 PITFAVAGDLGQTGWT---KSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIP 211 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~~---~~~~~~i~~~-~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~ 211 (333)
.++|+++||.+..... ...++++++. ++|+++..||.+..+... .....+.+..+. +-+ .+.||||+....
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~--~~~~~~~ln~~G--~Da-~TlGNHefD~g~ 78 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGL--SLKHYEFLKEAG--VNY-ITMGNHTWFQKL 78 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC--CHHHHHHHHHHT--CCE-EECCTTTTCCGG
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc--CHHHHHHHHhcC--CCE-EEEccCcccCCc
Confidence 5899999999733211 2344555443 689999999988644221 223333444333 333 477999996541
Q ss_pred Cccccccccccc------cccCcCCCCC-CCCceEEEEeCCEEEEEEe--ccCCCC--CCHHHHHHHHHHhhcccCCCCC
Q 019979 212 LIMDAFQSYNAR------WKMPFEESGS-NSNLYYSFDVAGAHLIMLG--SYADYD--EYSDQYRWLKDDLSKVDRKKTP 280 (333)
Q Consensus 212 ~~~~~~~~~~~~------~~~p~~~~~~-~~~~~ys~~~g~v~fi~ld--s~~~~~--~~~~q~~WL~~~L~~~~~~~~~ 280 (333)
. ...|.+. -+.|...... .+..|..++.++.++-+++ +...+. ....-.+-+++.++ +++.+
T Consensus 79 ~----~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~---~~~~d 151 (281)
T 1t71_A 79 D----LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL---KRDCD 151 (281)
T ss_dssp G----HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---TCCCS
T ss_pred c----HHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---hcCCC
Confidence 1 1111111 1122211000 2346777888875555444 332122 11223445566666 23677
Q ss_pred eEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 281 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
.+|+.+|.-. ....+.+.. .-.-+||+++.||+|...
T Consensus 152 iIIv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t 188 (281)
T 1t71_A 152 LHIVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp EEEEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCC
T ss_pred EEEEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 8999999521 111122222 223469999999999854
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.30 E-value=7.1e-07 Score=75.37 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=48.6
Q ss_pred CeeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccc---hhh--HHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYM---QHR--WDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~---~~~--~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
.++++++||+|.... ..++++.+...++|+|+++||+++.+.. ... -....+.++.+. .|++.++||||..
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD~~ 101 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA--HKVIAVRGNCDSE 101 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG--GGEEECCCTTCCH
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC--CceEEEECCCchH
Confidence 479999999996532 2345566656789999999999975431 111 133444444443 5899999999983
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.23 E-value=3.9e-05 Score=66.32 Aligned_cols=166 Identities=17% Similarity=0.136 Sum_probs=87.7
Q ss_pred eeEEEEeecCCCCCh----hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCC
Q 019979 137 ITFAVAGDLGQTGWT----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~----~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~ 212 (333)
.|++++||.= +... ...++++++.. |++|..|+.+..+.... ....+.+..+. +-++ +.||||+... .
T Consensus 1 m~ilf~GDv~-g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~--~~~~~~l~~~G--~Da~-TlGNHefD~~-~ 72 (255)
T 1t70_A 1 MRVLFIGDVF-GQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMH--RDAARGALEAG--AGCL-TLGNHAWHHK-D 72 (255)
T ss_dssp CEEEEECCBB-HHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCC--HHHHHHHHHHT--CSEE-ECCTTTTSST-T
T ss_pred CEEEEEeccC-ChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCC--HHHHHHHHhCC--CCEE-EeccccccCc-h
Confidence 4899999982 2212 34556665555 99888888775442111 22233333333 4444 6799999642 1
Q ss_pred ccccccccccc----cccCcCC--CCCCCCceEEEEeCCEEEEEEe--ccCCCCCCHHHHHHHHHHhhcccCCCCCeEEE
Q 019979 213 IMDAFQSYNAR----WKMPFEE--SGSNSNLYYSFDVAGAHLIMLG--SYADYDEYSDQYRWLKDDLSKVDRKKTPWLLV 284 (333)
Q Consensus 213 ~~~~~~~~~~~----~~~p~~~--~~~~~~~~ys~~~g~v~fi~ld--s~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv 284 (333)
...+.+. .-.|.|- .+..+..|..++.++.++-+++ +.........-.+-+++.+++. +.+.+|+
T Consensus 73 ----l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d~IIv 145 (255)
T 1t70_A 73 ----IYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLGTVFV 145 (255)
T ss_dssp ----HHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCCEEEE
T ss_pred ----HHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCCEEEE
Confidence 1111111 1112221 1222456777888875555554 3311111223344466666655 4567999
Q ss_pred EeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 285 LLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 285 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
.+|.-. ....+.+.. .-.-+||+++.||+|...
T Consensus 146 ~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~~ 178 (255)
T 1t70_A 146 DFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp EEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSCB
T ss_pred EeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 999421 111222222 223469999999999754
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.18 E-value=5.8e-05 Score=65.01 Aligned_cols=167 Identities=16% Similarity=0.182 Sum_probs=88.1
Q ss_pred eeEEEEeecCCCC---ChhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCc
Q 019979 137 ITFAVAGDLGQTG---WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (333)
Q Consensus 137 ~~f~~~gD~~~~~---~~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~ 213 (333)
.|++++||.=... .....++++++.. |++|..|..+..+.... +...+.+..+. +-++ +.||||+....
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~--~~~~~~l~~~G--~D~~-T~GNHefD~~~-- 72 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLD--RRSYRLLREAG--VDLV-SLGNHAWDHKE-- 72 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC--HHHHHHHHHHT--CCEE-ECCTTTTSCTT--
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC--HHHHHHHHhCC--CCEE-EeccEeeECch--
Confidence 4899999982111 1134566666666 98777766654333211 23333343333 4554 77999996531
Q ss_pred cccccccccc--cccCcCC-CCCCCCceEEEEeCCEEEEEEecc--CCCCCCHHHHHHHHHHhhcccCCCCCeEEEEecc
Q 019979 214 MDAFQSYNAR--WKMPFEE-SGSNSNLYYSFDVAGAHLIMLGSY--ADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (333)
Q Consensus 214 ~~~~~~~~~~--~~~p~~~-~~~~~~~~ys~~~g~v~fi~lds~--~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (333)
...|.+. .-.|.|- .+..+..|..++.++.++-+++-. ........-.+-+++.+++.+ .+.+|+.+|.
T Consensus 73 ---l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~IIv~~H~ 146 (252)
T 2z06_A 73 ---VYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADYVLVEVHA 146 (252)
T ss_dssp ---HHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSEEEEEEEC
T ss_pred ---HHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCEEEEEeCC
Confidence 1112111 1112221 112245777889998776666642 111111222334555555553 5679999996
Q ss_pred ccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccc
Q 019979 289 PWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (333)
Q Consensus 289 P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 329 (333)
-.. ...+.+. ..-.-+||+|+.||+|...
T Consensus 147 g~t-----------sek~~la-~~~dg~Vd~VvGgHTHv~t 175 (252)
T 2z06_A 147 EAT-----------SEKMALA-HYLDGRASAVLGTHTHVPT 175 (252)
T ss_dssp SCH-----------HHHHHHH-HHHBTTBSEEEEESSCSCB
T ss_pred CcH-----------HHHHHHH-HhCCCCeEEEEcCCCCcCC
Confidence 321 1112222 2234569999999999853
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.16 E-value=5e-06 Score=80.21 Aligned_cols=169 Identities=15% Similarity=0.124 Sum_probs=85.4
Q ss_pred CeeEEEEeecCCCCC---------------------hhhHHHHhhcCCCC-eEEccccccccccchh--hHHHHHHhhhh
Q 019979 136 PITFAVAGDLGQTGW---------------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELVQP 191 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~---------------------~~~~~~~i~~~~~d-~vl~~GDl~~~~~~~~--~~~~~~~~~~~ 191 (333)
.++|+.++|+|..-. ....++++++.+++ ++|.+||++....... ......+.+..
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 478999999984210 12345566555665 6788999996433111 11111223333
Q ss_pred hhcCCceEEccCCCCCCCCCCccccc-cccccccccCcCC-----C-------CCCCCceEEEEeCCEEE--EEEeccC-
Q 019979 192 LASARPWMVTQGNHEKESIPLIMDAF-QSYNARWKMPFEE-----S-------GSNSNLYYSFDVAGAHL--IMLGSYA- 255 (333)
Q Consensus 192 l~~~~P~~~~~GNHD~~~~~~~~~~~-~~~~~~~~~p~~~-----~-------~~~~~~~ys~~~g~v~f--i~lds~~- 255 (333)
+. .=..++||||+..... .+ ..+.+....|.-. . ...-..|..++.+++++ |.+-+..
T Consensus 83 lg---yDa~~lGNHEFd~G~~---~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~~ 156 (530)
T 4h1s_A 83 LR---YDAMALGNHEFDNGVE---GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKET 156 (530)
T ss_dssp TT---CCEEECCGGGGTTTTH---HHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTTH
T ss_pred cC---CCEEEEchhhhccCHH---HHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccce
Confidence 22 2346899999964321 11 1111212222110 0 01113566788888554 4444311
Q ss_pred ----CCC------CCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC-CCcEEEecC
Q 019979 256 ----DYD------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGH 324 (333)
Q Consensus 256 ----~~~------~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH 324 (333)
... ..-+..+..-+.|++ ++...+|+++|.... ... .+.++. +||+++.||
T Consensus 157 ~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~------------~d~---~la~~v~giD~IlgGH 218 (530)
T 4h1s_A 157 PFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE------------MDK---LIAQKVRGVDVVVGGH 218 (530)
T ss_dssp HHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH------------HHH---HHHHHSTTCCEEECCS
T ss_pred eeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch------------HHH---HHHhcCCCCCeeccCC
Confidence 011 112222333334443 255679999997531 111 233343 899999999
Q ss_pred cccc
Q 019979 325 VHAY 328 (333)
Q Consensus 325 ~H~y 328 (333)
.|.+
T Consensus 219 sH~~ 222 (530)
T 4h1s_A 219 SNTF 222 (530)
T ss_dssp SCCC
T ss_pred ccce
Confidence 9974
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.12 E-value=2.4e-05 Score=70.84 Aligned_cols=41 Identities=17% Similarity=0.124 Sum_probs=28.3
Q ss_pred CCeeEEEEeecCCCCC-----------------hhhHHHHhhcCCCC-eEEcccccccc
Q 019979 135 FPITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYD-VHLLPGDLSYA 175 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~-----------------~~~~~~~i~~~~~d-~vl~~GDl~~~ 175 (333)
-.++|+..+|+|..-. ....++++++..++ ++|.+||++..
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qG 65 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQG 65 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCC
Confidence 3588999999985321 12355666666665 77899999953
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00015 Score=55.44 Aligned_cols=90 Identities=17% Similarity=0.084 Sum_probs=58.9
Q ss_pred ccCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEE
Q 019979 33 FPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHT 104 (333)
Q Consensus 33 ~~~~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (333)
.|....+...|..+++.-.+.+++.|+|....... .-.|+|+......... ... ......+
T Consensus 12 ~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~--------~~~---~~~~~~~ 80 (123)
T 2edd_A 12 VPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKY--------KSE---DTTSLSY 80 (123)
T ss_dssp CSSCCCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCC--------CCE---EESSSEE
T ss_pred CCccCCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccE--------EEE---eCCceEE
Confidence 34444566789999988778999999999653221 3467887753211100 000 0113367
Q ss_pred EeCCCCCCCEEEEEeCc--------CCCeeEEECCCC
Q 019979 105 VIGPLEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 105 ~l~~L~p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
+|+||+|+|.|.++|.. +|....|+|.+.
T Consensus 81 ~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 81 TATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp EEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred EecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 89999999999999853 256778888763
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.75 E-value=1.4e-05 Score=67.93 Aligned_cols=68 Identities=26% Similarity=0.209 Sum_probs=44.9
Q ss_pred CCCeeEEEEeecCCCCC-hhhHHHHhhc-CCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~~~~i~~-~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
....+++++||+|.... ..++++.+.. .++|.++++||+++.+.... +.++.+. ..+++.+.||||..
T Consensus 10 ~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~------~~~~~l~-~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV------ECLELIT-FPWFRAVRGNHEQM 79 (221)
T ss_dssp GGCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH------HHHGGGG-STTEEECCCHHHHH
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChH------HHHHHHh-cCCEEEEccCcHHH
Confidence 34578999999995421 1344555543 47899999999997554221 1222232 25899999999973
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00029 Score=52.73 Aligned_cols=88 Identities=11% Similarity=0.137 Sum_probs=55.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC------CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
.+...|..+.+...+.+++.|+|..... ...-.|+|.............. ...+....++|++|+|
T Consensus 7 ~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p 78 (114)
T 1x4y_A 7 GPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--------MVEGDRYWHSISHLQP 78 (114)
T ss_dssp SCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--------EEETTCCEEEECSCCT
T ss_pred CCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeE--------ecCCcEeEEEcCCCCC
Confidence 4456788888887779999999997631 1223677765543210000000 0111124578999999
Q ss_pred CCEEEEEeCc--------CCCeeEEECCCC
Q 019979 112 DTVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
+|.|.+||.. .|+...++|.+.
T Consensus 79 ~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~ 108 (114)
T 1x4y_A 79 ETSYDIKMQCFNEGGESEFSNVMICETKAR 108 (114)
T ss_dssp TCEEEEEEEEECTTCCCCCCCCEEEECCCC
T ss_pred CCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 9999999853 256778888764
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00038 Score=51.87 Aligned_cols=85 Identities=21% Similarity=0.270 Sum_probs=55.7
Q ss_pred CCCCCceEEEEec--CCCcEEEEEEcCCCCC----CcEEEEeccCCCC--CeeEEeeEEEEeeeeeecCeEEEEEeCCCC
Q 019979 39 PSSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGY--NCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (333)
Q Consensus 39 ~~~~p~~v~l~~~--~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 110 (333)
+...|..+.+... +.+++.|+|....... .-.|+|....+.. ..... ........++|++|+
T Consensus 8 P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~ 77 (114)
T 2ede_A 8 PTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIME----------TISGDRLTHQIMDLN 77 (114)
T ss_dssp CCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEE----------EEETTCCEEEECSCC
T ss_pred CCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEE----------EECCCceEEEEcCCC
Confidence 4467888888877 6799999999764322 3367776643221 11110 011233467899999
Q ss_pred CCCEEEEEeCc--------CCCeeEEECCCC
Q 019979 111 HDTVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
|++.|.+||.. .|+...|+|++.
T Consensus 78 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 108 (114)
T 2ede_A 78 LDTMYYFRIQARNSKGVGPLSDPILFRTLKV 108 (114)
T ss_dssp SSCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred CCCEEEEEEEEEeCCcCcCCcccEEEEecCC
Confidence 99999999953 256788888764
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.70 E-value=1.6e-05 Score=69.47 Aligned_cols=65 Identities=17% Similarity=0.142 Sum_probs=42.7
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhhcCCC-CeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~-d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
.+++++||+|.... ..++++.+...++ |.+|++||+++.+... .+ ..+.+.. .+++.+.||||..
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~--~~-~l~~l~~----~~~~~v~GNHd~~ 85 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDS--FG-VVRLLKR----LGAYSVLGNHDAK 85 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCH--HH-HHHHHHH----HTCEECCCHHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCH--HH-HHHHHHH----CCCEEEeCcChHH
Confidence 48999999994321 2345555555555 9999999999765432 11 2222222 4799999999973
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00019 Score=53.92 Aligned_cols=83 Identities=17% Similarity=0.201 Sum_probs=53.7
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCC
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 110 (333)
+...|..|++...+.+++.|+|.-..... .-.|+|+........ +.. .......++|+||+
T Consensus 8 pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~--------~~~---~~~~~~~~~i~gL~ 76 (113)
T 1x5j_A 8 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK--------YKN---ANATTLSYLVTGLK 76 (113)
T ss_dssp CCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCC--------CEE---CCBCSSEEEEESCC
T ss_pred CCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeE--------EEE---EecCcCEEEeCCCC
Confidence 34579999998888999999998653221 345778763211110 000 11223467899999
Q ss_pred CCCEEEEEeCc--------CCCeeEEECCC
Q 019979 111 HDTVYFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~t~p 132 (333)
|+|.|.++|.. .|....++|.+
T Consensus 77 P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~ 106 (113)
T 1x5j_A 77 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 106 (113)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECCC
T ss_pred CCcEEEEEEEEecCCccCCCcccEEeeccC
Confidence 99999999853 25566777765
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.58 E-value=4.2e-05 Score=67.39 Aligned_cols=67 Identities=19% Similarity=0.123 Sum_probs=43.4
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhhc-CCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~-~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
++++++||+|.... ..++++.+.. .++|.++++||+++.+.... ...+.+..+. .+++.+.||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~---~~l~~l~~l~--~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL---DVLRYVKSLG--DSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH---HHHHHHHHTG--GGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH---HHHHHHHhCC--CceEEEECCCcHH
Confidence 36899999995421 2344555544 56899999999998654321 2233333332 3799999999973
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00058 Score=50.30 Aligned_cols=83 Identities=17% Similarity=0.145 Sum_probs=51.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
.|..+.+.....+ +.|+|....... .-.|+|........... . .. . ...+....++|+||+|+|.|.
T Consensus 9 ~P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~--~---~~-~-~~~~~~~~~~i~~L~p~t~Y~ 80 (105)
T 2haz_A 9 SPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK--W---YD-A-KEASMEGIVTIVGLKPETTYA 80 (105)
T ss_dssp CCEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE--E---EE-H-HHHHHHSEEEECSCCTTCEEE
T ss_pred CCCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccc--e---EE-c-cccCCccEEEECCCCCCCEEE
Confidence 3888877766666 999999764321 23577776653312110 0 00 0 011123467899999999999
Q ss_pred EEeCc--------CCCeeEEECCC
Q 019979 117 YRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p 132 (333)
+||.. .|+...|+|.|
T Consensus 81 ~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 81 VRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEcCCccCCCcCCEeeEEec
Confidence 99863 26677898876
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.001 Score=49.96 Aligned_cols=83 Identities=22% Similarity=0.259 Sum_probs=55.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCC-CC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDD-ES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~-~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
..|..+.+...+.+++.|.|.... .. ..-.|+|............ ........++|+||+|+|.|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y 88 (120)
T 1x5f_A 19 SAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN----------TSHPGEMQVTIQNLMPATVY 88 (120)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE----------CSSTTCSEEEECSCCTTCEE
T ss_pred CCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEE----------eccCCccEEEeCCCCCCCEE
Confidence 478889888778999999998764 22 2236777765432211100 11122446789999999999
Q ss_pred EEEeCc--------CCCeeEEECCCC
Q 019979 116 FYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p~ 133 (333)
.+||.. .++...|+|.+.
T Consensus 89 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 89 IFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEECCCccCCCCCCEEEEeCCC
Confidence 999863 256678888653
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00075 Score=49.56 Aligned_cols=77 Identities=14% Similarity=0.235 Sum_probs=48.1
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCC------CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCC
Q 019979 37 PKPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (333)
Q Consensus 37 ~~~~~~p~~v~l~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 110 (333)
|.++..|..+.+...+++++.|+|..... ...-.|.|+............. . ..+....++|.||+
T Consensus 2 ~~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~--~------v~~~~~~~~l~~L~ 73 (102)
T 3n1f_C 2 STPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRD--V------VEGSKQWHMIGHLQ 73 (102)
T ss_dssp --CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEE--E------EETTCSEEEECSCC
T ss_pred CCCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEE--E------EcCCceEEECCCCC
Confidence 34667899998887889999999987632 1233688887653210000000 0 11112246899999
Q ss_pred CCCEEEEEeCc
Q 019979 111 HDTVYFYRCGR 121 (333)
Q Consensus 111 p~t~Y~Y~v~~ 121 (333)
|+|.|.++|..
T Consensus 74 p~t~Y~v~V~A 84 (102)
T 3n1f_C 74 PETSYDIKMQC 84 (102)
T ss_dssp TTCEEEEEEEE
T ss_pred CCCEEEEEEEE
Confidence 99999999863
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00047 Score=50.89 Aligned_cols=81 Identities=12% Similarity=0.128 Sum_probs=52.6
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+...+.+++.|.|........ -.|+|............ .......++|+||+|++.|.+
T Consensus 10 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~l~~L~p~t~Y~~ 78 (108)
T 2djs_A 10 TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSM-----------ARSQTNTARIDGLRPGMVYVV 78 (108)
T ss_dssp CCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEE-----------EEESSSEEEEESCCTTCEEEE
T ss_pred CCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeE-----------EecCccEEEEcCCCCCCEEEE
Confidence 577777777789999999987643322 24556555432111100 001123567899999999999
Q ss_pred EeCc--------CCCeeEEECCCC
Q 019979 118 RCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 118 ~v~~--------~s~~~~F~t~p~ 133 (333)
||.. .|+...|+|++.
T Consensus 79 ~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 79 QVRARTVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp EEEEEESSCEEEECCCEEEECCCS
T ss_pred EEEEEeCCEECCCCCCEEEEeCCC
Confidence 9864 256778999875
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00019 Score=52.47 Aligned_cols=81 Identities=20% Similarity=0.249 Sum_probs=50.8
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCC--CC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDD--ES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~--~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
++..|..+.+...+.+++.|+|.... .. ..-.|+|....+....... . ......|+||+|+
T Consensus 8 pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~-----------~--~~~~~~i~~L~p~ 74 (103)
T 2edy_A 8 PSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNI-----------T--TDTRFTLTGLKPD 74 (103)
T ss_dssp CSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEE-----------E--SSSCCEECSCCTT
T ss_pred CCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEc-----------C--CcceEEEcCCCCC
Confidence 34467788776666899999998772 11 2235667665442111111 1 1224578999999
Q ss_pred CEEEEEeCc--------CCCeeEEECCC
Q 019979 113 TVYFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~t~p 132 (333)
+.|.+||.. .|+...|+|.|
T Consensus 75 t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 75 TTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred CEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 999999964 24556677654
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0008 Score=49.77 Aligned_cols=81 Identities=11% Similarity=0.181 Sum_probs=51.8
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+.....+++.|.|...... ..-.|+|............ .......++|++|+|++.|.+
T Consensus 13 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 81 (111)
T 1x5l_A 13 QVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----------LKAVTTRATVSGLKPGTRYVF 81 (111)
T ss_dssp CCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----------EEESSSEEEECSCCTTCEEEE
T ss_pred CCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEE-----------ecCCCCEEEEcCCCCCCEEEE
Confidence 5777766656689999999866432 2235677665421111100 011123578899999999999
Q ss_pred EeCc--------CCCeeEEECCCC
Q 019979 118 RCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 118 ~v~~--------~s~~~~F~t~p~ 133 (333)
||.. .|+...|+|++.
T Consensus 82 ~V~A~n~~G~g~~S~~~~~~T~~~ 105 (111)
T 1x5l_A 82 QVRARTSAGCGRFSQAMEVETGKP 105 (111)
T ss_dssp CEEEEETTEECCCCCCEEEECCCT
T ss_pred EEEEEeCCcCCCCcccEEEEcCCC
Confidence 9863 367788998775
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0016 Score=48.67 Aligned_cols=86 Identities=16% Similarity=0.253 Sum_probs=55.4
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCC
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 113 (333)
.....|..+.+...+.+++.|.|........ -.|+|............ .........+|++|+|++
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t 85 (119)
T 2ed7_A 16 VLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----------TTQPGSLQLTVGNLKPEA 85 (119)
T ss_dssp SSCCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----------CCCTTCCEEEECSCCSSS
T ss_pred CCCcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----------eecCCceEEEeCCCCCCC
Confidence 3445788888887789999999987643222 24556554432221110 111224467899999999
Q ss_pred EEEEEeCc--------CCCeeEEECCCC
Q 019979 114 VYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
.|.|||.. .|+...++|.+.
T Consensus 86 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 86 MYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 99999853 256677888653
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00047 Score=50.89 Aligned_cols=80 Identities=16% Similarity=0.195 Sum_probs=51.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+.+.....+++.+.|......+ .-.|+|....+....... .. ....+|+||+|++.|.
T Consensus 9 ~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~-----------~~--~~~~~v~~L~p~t~Y~ 75 (106)
T 1x4x_A 9 DQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYC-----------GP--GLSYEIKGLSPATTYY 75 (106)
T ss_dssp CCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEE-----------ES--CSEEEEESCCSSCEEE
T ss_pred CCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEe-----------CC--cceEEEcCCCCCCEEE
Confidence 356667677667999999998764322 235667655432211111 11 1256788999999999
Q ss_pred EEeCc--------CCCeeEEECCCC
Q 019979 117 YRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p~ 133 (333)
|||.. .|+...++|++.
T Consensus 76 frV~A~n~~G~g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 76 CRVQALSVVGAGPFSEVVACVTPPS 100 (106)
T ss_dssp EEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEEEcCCcCCCCcCCEEEECCCC
Confidence 99863 256778888764
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00017 Score=64.34 Aligned_cols=70 Identities=20% Similarity=0.192 Sum_probs=44.3
Q ss_pred CeeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhc--CCceEEccCCCCCC
Q 019979 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~P~~~~~GNHD~~ 208 (333)
..++.++||+|.... ..++++.+.....+.++++||+++.+.... + ....+..+.. .-.++.+.||||..
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~--e-vl~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSV--E-TVTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHH--H-HHHHHHHHHHHCTTTEEECCCTTSST
T ss_pred cCCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChH--H-HHHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 356899999985422 234455554556788999999998665321 1 2233333321 23589999999985
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00089 Score=50.35 Aligned_cols=87 Identities=21% Similarity=0.240 Sum_probs=54.8
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
.++..|..+.+...+.+++.|+|..... ...-.|+|....+...... .. ...+....++|+||+|+|.|
T Consensus 17 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~-----~~----~~~~~~~~~~i~~L~p~t~Y 87 (119)
T 2ee2_A 17 APSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAAN-----RV----QVTSQEYSARLENLLPDTQY 87 (119)
T ss_dssp CCCCCCCSCEEEEEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCE-----EE----EEETTCSEEEECSCCTTCEE
T ss_pred CCCCCCCcEEEEEccCCEEEEEecCCCCCccceEEEEEEECCCcccCcE-----EE----EcCCCEeEEEECCCCCCCEE
Confidence 3445677888877779999999987642 2233677765543211100 00 01122346789999999999
Q ss_pred EEEeCc--------CCCeeEEECCCC
Q 019979 116 FYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p~ 133 (333)
.+||.. .|+...|+|.+.
T Consensus 88 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ee2_A 88 FIEVGACNSAGCGPPSDMIEAFTKKA 113 (119)
T ss_dssp EEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEEEEEcCCccCCCCCCEEEECCCC
Confidence 999853 256678888653
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0021 Score=46.83 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=47.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+.+...+.+++.|+|.-.... ..-.|+|............ ........++|+||+|+|.|.++|
T Consensus 3 ~~P~~l~~~~~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~----------~~~~~~t~~~i~~L~p~t~Y~~~V 72 (100)
T 3b83_A 3 QPPFNIKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTV----------DLTSSITSLTLTNLEPNTTYEIRI 72 (100)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEE----------EECTTEEEEEECSCCTTCEEEEEE
T ss_pred ccCCccEEEEecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEE----------EECCcceEEEECCCCCCCEEEEEE
Confidence 36888888877799999999866432 3346778755422111100 122344578899999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 73 ~A 74 (100)
T 3b83_A 73 VA 74 (100)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0025 Score=46.88 Aligned_cols=78 Identities=19% Similarity=0.231 Sum_probs=51.4
Q ss_pred CCceEEEEe--cCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 42 HPQQVHISL--AGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 42 ~p~~v~l~~--~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
.|..+.+.. .+.+++.|+|........ -.|+|....+....... .. ...++|++|+|++.|
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~--~~~~~l~~L~p~t~Y 76 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQR-----------AA--SNFTEIKNLLVNTLY 76 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEE-----------ES--SSEEEECSCCSSCEE
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEec-----------CC--ccEEEeCCCCCCCEE
Confidence 788887776 358899999997643222 35666655432222111 11 126789999999999
Q ss_pred EEEeCc--------CCCeeEEECCC
Q 019979 116 FYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p 132 (333)
.+||.. .|+...++|.+
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 77 TVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEECCCceeCCCCCEEEECCC
Confidence 999864 25677788854
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0021 Score=47.18 Aligned_cols=83 Identities=19% Similarity=0.215 Sum_probs=51.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+.+...+.+++.|+|.-.... ..-.|+|.......... .. ...+....++|+||+|||.|.++|
T Consensus 4 ~~P~~l~v~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~------~~----~v~~~~~~~~l~~L~p~t~Y~~~V 73 (104)
T 2rb8_A 4 DAPSQIEVKDVTDTTALITWMPPSQPVDGFELTYGIKDVPGDRT------TI----DLTEDENQYSIGNLKPDTEYEVSL 73 (104)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCE------EE----EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCccEEEEecCCeEEEEEcCCCCccceEEEEEEECcCCCceE------EE----EcCCCcCEEEeCCCCCCCEEEEEE
Confidence 36888988877799999999765322 23467776543211110 00 011223467899999999999998
Q ss_pred CcC-------CCeeEEECCCC
Q 019979 120 GRQ-------GPEFEFKTPPA 133 (333)
Q Consensus 120 ~~~-------s~~~~F~t~p~ 133 (333)
..- .....|+|.+.
T Consensus 74 ~A~~~~g~s~p~~~~~~T~~~ 94 (104)
T 2rb8_A 74 ISRRGDMSSNPAKETFTTGLA 94 (104)
T ss_dssp EEEETTEECCCEEEEEECCC-
T ss_pred EEEeCCccCCCEEEEEECCCC
Confidence 641 22456888663
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0014 Score=48.53 Aligned_cols=80 Identities=14% Similarity=0.203 Sum_probs=52.7
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCC--CCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGG--YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
.|..+++.....+++.|.|....... .-.|+|....+. ...... . ... ..++|+||+|++.|
T Consensus 10 ~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~---------~~~--~~~~i~~L~p~t~Y 77 (109)
T 2e7h_A 10 AVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFL-K---------TSE--NRAELRGLKRGASY 77 (109)
T ss_dssp CCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEE-E---------ESS--SEEEEESCCTTSCE
T ss_pred CCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEE-c---------cCC--CEEEECCCCCCCeE
Confidence 47778887777999999998764322 236777665411 111111 0 111 26788999999999
Q ss_pred EEEeCc--------CCCeeEEECCCC
Q 019979 116 FYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p~ 133 (333)
.+||.. .|+...|+|.+.
T Consensus 78 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 103 (109)
T 2e7h_A 78 LVQVRARSEAGYGPFGQEHHSQTQLD 103 (109)
T ss_dssp EEEEEEECSSCBCCCCSCEECCCCCC
T ss_pred EEEEEEEeCCccCCCCCCEEEEcCCC
Confidence 999863 256778888764
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00027 Score=63.48 Aligned_cols=69 Identities=16% Similarity=0.139 Sum_probs=43.6
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhh--hcCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPL--ASARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l--~~~~P~~~~~GNHD~~ 208 (333)
.++.++||+|.... ..++++.+.....+-+|++||+++.+.... + ....+..+ ...-.++.+.||||..
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~--e-vl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--E-TICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHH--H-HHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChH--H-HHHHHHHhhhhcCCceEEecCCchHh
Confidence 46899999986532 234455554555688999999998665321 1 22223222 2123589999999974
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00024 Score=64.41 Aligned_cols=71 Identities=13% Similarity=-0.028 Sum_probs=44.2
Q ss_pred CCCeeEEEEeecCCCCC-hhhHHHHhhc--------CCCCeEEccccccccccchhhHHHHHHhhhhhh-----cCCceE
Q 019979 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQ--------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA-----SARPWM 199 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~~~~i~~--------~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~-----~~~P~~ 199 (333)
....+++++||+|.... ..++++.+.. .++|.++++||+++.+.... .....+..+. ...+++
T Consensus 68 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~---evl~~l~~l~~~~~~~~~~v~ 144 (342)
T 2z72_A 68 LGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVN---EVLWFMYQLDQQARDAGGMVH 144 (342)
T ss_dssp CCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHH---HHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHH---HHHHHHHHHHHHHhhCCCeEE
Confidence 45678999999995421 1233443321 15799999999998665321 1222232322 235699
Q ss_pred EccCCCCC
Q 019979 200 VTQGNHEK 207 (333)
Q Consensus 200 ~~~GNHD~ 207 (333)
.+.||||.
T Consensus 145 ~v~GNHE~ 152 (342)
T 2z72_A 145 LLMGNHEQ 152 (342)
T ss_dssp ECCCHHHH
T ss_pred EEecCCcH
Confidence 99999997
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0022 Score=46.92 Aligned_cols=78 Identities=12% Similarity=0.028 Sum_probs=51.8
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+.....+++.|+|...... ..-.|+|............ .. ...++|++|+|++.|.+
T Consensus 10 ~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~--~~~~~i~~L~p~t~Y~~ 76 (106)
T 2ed8_A 10 PVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIE-----------VD--GLSYKLEGLKKFTEYSL 76 (106)
T ss_dssp CCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEE-----------EC--SSCEEEESCCTTCEEEE
T ss_pred CCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEe-----------CC--ccEEEECCCCCCCEEEE
Confidence 7888888877799999999976322 2236677665432211110 11 23567899999999999
Q ss_pred EeCc--------CCCeeEEECCC
Q 019979 118 RCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 118 ~v~~--------~s~~~~F~t~p 132 (333)
||.. .|+...++|..
T Consensus 77 ~V~A~n~~G~g~~S~~~~~~T~~ 99 (106)
T 2ed8_A 77 RFLAYNRYGPGVSTDDITVVTLS 99 (106)
T ss_dssp EEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEeCCccCCCcCCEEEEcCC
Confidence 9863 25667788864
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0015 Score=48.33 Aligned_cols=77 Identities=16% Similarity=0.175 Sum_probs=48.3
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+++.-.+.+++.++|.....+. .-.|+|..... ... .......++|+||+|||.|.+
T Consensus 10 ~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--~~~-------------~~~~~t~~~i~gL~PgT~Y~~ 74 (104)
T 2dle_A 10 QVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD--SSN-------------LNVSEPRAVIPGLRSSTFYNI 74 (104)
T ss_dssp BEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC--EEE-------------EEESSSEEECCSCCSSCEEEE
T ss_pred CCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC--eEE-------------EcCCCCEEEECCCCCCCEEEE
Confidence 56666677667999999998653332 24566654321 000 001123688999999999999
Q ss_pred EeCcC-------CCeeEEECCCC
Q 019979 118 RCGRQ-------GPEFEFKTPPA 133 (333)
Q Consensus 118 ~v~~~-------s~~~~F~t~p~ 133 (333)
+|... +....++|.|.
T Consensus 75 ~V~A~~~~~~~~p~~~~~~T~p~ 97 (104)
T 2dle_A 75 TVCPVLGDIEGTPGFLQVHTPPV 97 (104)
T ss_dssp EEEEESSSCCCBCEEEEEECCCC
T ss_pred EEEEEECCcccCCeeEEEEccCC
Confidence 98641 23456777664
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0015 Score=47.71 Aligned_cols=81 Identities=12% Similarity=0.142 Sum_probs=52.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCC-CeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGY-NCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
..|..+.+.....+++.|.|..... ...-.|+|....... ...+. .......+|++|+|++.|.|
T Consensus 9 ~~P~~~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~~i~~L~p~t~Y~~ 76 (106)
T 2dju_A 9 KPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD------------GVATTRYSIGGLSPFSEYAF 76 (106)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC------------CCCSSEEEEESCCTTCEEEE
T ss_pred cCCCCcEEEeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc------------CCCccEEEEeCCCCCcEEEE
Confidence 3688888877778999999997631 123467776654321 11111 11122467889999999999
Q ss_pred EeCc--------CCCeeEEECCCC
Q 019979 118 RCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 118 ~v~~--------~s~~~~F~t~p~ 133 (333)
||.. .|+...++|.+.
T Consensus 77 ~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 77 RVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EEEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEEeCCccCCCcccEEeEcCCC
Confidence 9863 245677888653
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0016 Score=48.10 Aligned_cols=80 Identities=18% Similarity=0.280 Sum_probs=49.6
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
.|....+.-.+.+++++.|...... ..-.|+|....+......... .. ....+|++|+|++.|.
T Consensus 10 ~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~--~~~~~v~~L~p~t~Y~ 78 (109)
T 1x5x_A 10 MPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD---------GE--DLAYTVKNLRRSTKYK 78 (109)
T ss_dssp CCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE---------ES--CSEEEEESCCSSCEEE
T ss_pred CCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEe---------CC--ccEEEECCCCCCCEEE
Confidence 4555556667799999999865432 223677766543211111000 11 2356788999999999
Q ss_pred EEeCc--------CCCeeEEECCC
Q 019979 117 YRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p 132 (333)
|||.. .|+...++|.+
T Consensus 79 frV~A~n~~G~s~~S~~~~~~T~~ 102 (109)
T 1x5x_A 79 FKVIAYNSEGKSNPSEVVEFTTCP 102 (109)
T ss_dssp EEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEeCCCCcCCccCEEeEeCC
Confidence 99864 14566778865
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00097 Score=49.75 Aligned_cols=79 Identities=18% Similarity=0.202 Sum_probs=52.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+++...+.+++.|+|...... ..-.|+|............ . ....++|+||+|+|.|.
T Consensus 19 ~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-----------~--~~~~~~i~~L~p~t~Y~ 85 (116)
T 1x5g_A 19 GPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVD-----------V--SSHSYTINGLKKYTEYS 85 (116)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEE-----------E--CSSEEEECSCCTTCEEE
T ss_pred cCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEe-----------c--CCceEEEcCCCCCCEEE
Confidence 36788888777799999999876322 2336777665433221111 1 12367889999999999
Q ss_pred EEeCc--------CCCeeEEECCC
Q 019979 117 YRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p 132 (333)
+||.. .|+...|+|.+
T Consensus 86 ~~V~A~n~~G~g~~S~~~~~~T~~ 109 (116)
T 1x5g_A 86 FRVVAYNKHGPGVSTPDVAVRTLS 109 (116)
T ss_dssp EEEEEECSSCCCCBCCCCCEECCC
T ss_pred EEEEEEcCCCcCCCCCCEEEECCC
Confidence 99853 25567788865
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.002 Score=48.40 Aligned_cols=88 Identities=16% Similarity=0.177 Sum_probs=55.8
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC--C----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDE--S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
++..|..+.+...+.+++.|.|..... . ..-.|+|............-. .....+....++|+||+|+
T Consensus 15 P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~~L~p~ 88 (122)
T 1va9_A 15 PDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV------EMKATGDSEVYTLDNLKKF 88 (122)
T ss_dssp CSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC------BCCCCSSEEEEEEESCCSS
T ss_pred CCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEE------EEecCCceeEEEeCCCCCC
Confidence 344788888887789999999997743 1 223677766543211000000 0012234567889999999
Q ss_pred CEEEEEeCc--------CCCeeEEECCC
Q 019979 113 TVYFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~t~p 132 (333)
+.|.+||.. .|+...|+|..
T Consensus 89 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 116 (122)
T 1va9_A 89 AQYGVVVQAFNRAGTGPSSSEINATTLE 116 (122)
T ss_dssp CCEEEEEEEEETTEECCCCCCEECCCCS
T ss_pred CEEEEEEEEEcCCCCCCCccCEEEEeCC
Confidence 999999863 25567787765
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0045 Score=57.92 Aligned_cols=138 Identities=14% Similarity=0.151 Sum_probs=79.8
Q ss_pred CCCeeEEEEeecCCCCCh---hh----HHHHhh-----------cCCCCeEEccccccccccc-----------------
Q 019979 134 QFPITFAVAGDLGQTGWT---KS----TLDHIG-----------QCKYDVHLLPGDLSYADYM----------------- 178 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~---~~----~~~~i~-----------~~~~d~vl~~GDl~~~~~~----------------- 178 (333)
..+..++++||+|.+... .. .++.+. ..++.-+|++||++...+.
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 456789999999987652 11 222232 3568899999999975322
Q ss_pred --hhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCccccccccccccccCcC-CCCCCCCceEEEEeCCEEEEEEeccC
Q 019979 179 --QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE-ESGSNSNLYYSFDVAGAHLIMLGSYA 255 (333)
Q Consensus 179 --~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ys~~~g~v~fi~lds~~ 255 (333)
....+.+.+++..+...+|+...|||||-.+...-+..+. ...|..... ..-..-..-|.+++++++|++.....
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh--~~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGqn 355 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLH--PCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQN 355 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCC--TTSCHHHHTSTTEEECCSSEEEEETTEEEEECSSHH
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcC--HHHhhhhhhcCccEEeCCCeEEEECCEEEEEECCCC
Confidence 1233455567777888899999999999854322111111 011110000 00001133466999999999876421
Q ss_pred -----CCCCCHHHHHHHHHHhhc
Q 019979 256 -----DYDEYSDQYRWLKDDLSK 273 (333)
Q Consensus 256 -----~~~~~~~q~~WL~~~L~~ 273 (333)
.+...+.-++.++..|+.
T Consensus 356 idDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 356 VSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp HHHHHHHSCCCCHHHHHHHHHHB
T ss_pred HHHHHhcCCCCCHHHHHHHHHHH
Confidence 011223456788888876
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0013 Score=48.68 Aligned_cols=77 Identities=18% Similarity=0.292 Sum_probs=49.0
Q ss_pred CCceEEEEecCCCcEEEEE--EcCCCC---CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 42 HPQQVHISLAGDSHMRVTW--ITDDES---SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W--~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
.|..+++.....+++.|.| ...... ..-.|+|....+ . ..+... ... ++|+||+|+|.|.
T Consensus 12 ~p~~l~~~~~~~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~~--------~-~~~~~~---~~~---~~i~~L~p~t~Y~ 76 (107)
T 1x5a_A 12 SGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE--------E-WHQMVL---EPR---VLLTKLQPDTTYI 76 (107)
T ss_dssp CSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSC--------E-EEEEES---SSE---EEEESCCSSCEEE
T ss_pred CCCceEEEecCCCEEEEEECCCCCCCCCCceEEEEEEEeCCC--------C-ceEEEe---cce---EEECCCCCCCEEE
Confidence 5667777767799999999 654322 123466654410 0 011111 111 8899999999999
Q ss_pred EEeCc--------CCCeeEEECCCC
Q 019979 117 YRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p~ 133 (333)
+||.. .|+...|+|.+.
T Consensus 77 f~V~A~~~~G~g~~S~~~~~~T~~~ 101 (107)
T 1x5a_A 77 VRVRTLTPLGPGPFSPDHEFRTSPP 101 (107)
T ss_dssp EEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEEEECCCccCCCCCCEEEEECCC
Confidence 99963 356778998775
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0016 Score=49.65 Aligned_cols=85 Identities=12% Similarity=0.179 Sum_probs=54.4
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
...|..+.+...+.+++.|+|....... .-.|+|............ . .........+|++|+|++.|
T Consensus 28 P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~--------~~~~~~~~~~i~~L~p~t~Y 98 (130)
T 1wfo_A 28 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV-E--------VLAPSARQYTATGLKPESVY 98 (130)
T ss_dssp CCCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE-E--------EECTTCCEEEEESCCSSSEE
T ss_pred CCCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEE-E--------EeCCCceEEEEcCCCCCCEE
Confidence 3478888888778999999998764322 235677665432111000 0 12233456788999999999
Q ss_pred EEEeCc--------CCCeeEEECCCC
Q 019979 116 FYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p~ 133 (333)
.+||.. .++...|+|.+.
T Consensus 99 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 99 LFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEEEEeCCcCCCCcccEEEecCCC
Confidence 999864 145567888653
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.003 Score=46.84 Aligned_cols=81 Identities=11% Similarity=0.237 Sum_probs=52.4
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
..|..+++...+.+++.|+|...... ..-.|+|............ ... ...++|+||+|++.|.+|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~--~~~~~i~~L~p~t~Y~~~ 86 (115)
T 1x5z_A 19 GQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----------IEP--GTSYRLQGLKPNSLYYFR 86 (115)
T ss_dssp CCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----------ECS--SSEEEEECCCTTCEEEEC
T ss_pred CCCccCEeeeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEe----------cCC--CcEEEECCCCCCCeEEEE
Confidence 47888888777799999999876432 2235556554332111100 011 235778999999999999
Q ss_pred eCc--------CCCeeEEECCCC
Q 019979 119 CGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 119 v~~--------~s~~~~F~t~p~ 133 (333)
|.. .|+...|+|.+.
T Consensus 87 V~A~n~~G~g~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 87 LAARSPQGLGASTAEISARTMQS 109 (115)
T ss_dssp EEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCcccCCCcCEEEecCCC
Confidence 863 256678888653
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0014 Score=48.09 Aligned_cols=71 Identities=10% Similarity=0.128 Sum_probs=46.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
..|..+++...+.+++.++|.-......-.|+|....+......... ..... .++|+||+|+|.|.++|.
T Consensus 10 ~~P~~l~~~~~~~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~~~--------~~~~~--~~~l~~L~p~t~Y~~~V~ 79 (104)
T 2dkm_A 10 PPPRALTLAAVTPRTVHLTWQPSAGATHYLVRCSPASPKGEEEEREV--------QVGRP--EVLLDGLEPGRDYEVSVQ 79 (104)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSSCSEEEEEEEESSSCCSSCCEEE--------EESSS--EEEEESCCTTCCEEEEEE
T ss_pred CCCceeEEEecCCCEEEEEEeCCCCCCeEEEEEEECCCCCCcceEEE--------ecCCC--EEEECCCCCCCEEEEEEE
Confidence 47888888888899999999765433334677766543211100000 01122 788999999999999986
Q ss_pred c
Q 019979 121 R 121 (333)
Q Consensus 121 ~ 121 (333)
.
T Consensus 80 A 80 (104)
T 2dkm_A 80 S 80 (104)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0017 Score=48.33 Aligned_cols=82 Identities=23% Similarity=0.297 Sum_probs=53.2
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
...|..+.+.-.+++++.|+|..... ...-.|+|....+....... ..+....+.|+||+|+|.|.++
T Consensus 8 ~~pP~~l~~~~vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~-----------v~~~~t~~~l~~L~p~T~Y~v~ 76 (108)
T 2ee3_A 8 LAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTE-----------APGNATSAMLGPLSSSTTYTVR 76 (108)
T ss_dssp CCCSSCEEEESCCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEE-----------EETTCCEEEECSCCSSCEEEEE
T ss_pred CCCCceEEEEEccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEE-----------cCCCcCEEEcCCCCCCCEEEEE
Confidence 35788998887789999999976532 23447888776542211100 1122346789999999999999
Q ss_pred eCc---C--C--CeeEEECCC
Q 019979 119 CGR---Q--G--PEFEFKTPP 132 (333)
Q Consensus 119 v~~---~--s--~~~~F~t~p 132 (333)
|.. . + ....|+|.+
T Consensus 77 V~A~~~~g~s~p~~~~~~T~~ 97 (108)
T 2ee3_A 77 VTCLYPGGGSSTLTGRVTTKK 97 (108)
T ss_dssp EEEECTTSCEEEEEEEEECCC
T ss_pred EEEEeCCCcCCCccCEEEeCC
Confidence 853 1 1 124688863
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0013 Score=49.57 Aligned_cols=73 Identities=15% Similarity=0.284 Sum_probs=45.9
Q ss_pred cCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCcC----
Q 019979 51 AGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ---- 122 (333)
Q Consensus 51 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~---- 122 (333)
.+.++++|+|.-....+ .-.|+|+......+..... .++....++|.||+|++.|.+||...
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~Y~frV~A~N~~G 88 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK----------VQGNKDHIILEHLQWTMGYEVQITAANRLG 88 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE----------EETTTCCEEECCCCTTCCEEEEEEEECTTS
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE----------cCCCcCEEEEcCCCCCCEEEEEEEEEeCCc
Confidence 46899999997643222 2378888864332222110 11223357899999999999998641
Q ss_pred ---CCeeEEECCCC
Q 019979 123 ---GPEFEFKTPPA 133 (333)
Q Consensus 123 ---s~~~~F~t~p~ 133 (333)
.....|+|.+.
T Consensus 89 ~s~pS~~~~~T~~~ 102 (114)
T 2kbg_A 89 YSEPTVYEFSMPPK 102 (114)
T ss_dssp CEEEEEEEECCCCC
T ss_pred CcCCcCCEEEcCCC
Confidence 12467888654
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0011 Score=49.65 Aligned_cols=75 Identities=16% Similarity=0.155 Sum_probs=47.1
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCC-----CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 37 PKPSSHPQQVHISLAGDSHMRVTWITDDE-----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 37 ~~~~~~p~~v~l~~~~~~~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
+.+...|....+.-.+.++++|.|..... ...-.|+|...++..+..+.. .....-..+++||+|
T Consensus 8 ~~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p 77 (112)
T 1bpv_A 8 SSPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF----------SNILENEFTVSGLTE 77 (112)
T ss_dssp -CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC----------SCCCSSEEEECSCCS
T ss_pred CCCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeec----------ccCccCEEEECCCCC
Confidence 34555677777776779999999984321 133478887765332222110 011122467899999
Q ss_pred CCEEEEEeCc
Q 019979 112 DTVYFYRCGR 121 (333)
Q Consensus 112 ~t~Y~Y~v~~ 121 (333)
|+.|.|||..
T Consensus 78 ~t~Y~frV~A 87 (112)
T 1bpv_A 78 DAAYEFRVIA 87 (112)
T ss_dssp SCCEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999864
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0028 Score=48.41 Aligned_cols=86 Identities=22% Similarity=0.209 Sum_probs=53.0
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcC--CCCCCc----EEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITD--DESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~--~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
++..|..+.+...+.+++.|.|... ...... .|+|............ ..........++|+||+|+
T Consensus 18 P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~L~p~ 89 (134)
T 2edx_A 18 PSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHV--------VDGISREHSSWDLVGLEKW 89 (134)
T ss_dssp CSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEE--------ECCCBTTCSEEEEESCCTT
T ss_pred CCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEE--------EEeeCCCccEEEeCCCCCC
Confidence 3446888888877789999999977 222222 4555544332111000 0001233456789999999
Q ss_pred CEEEEEeCc--------CCCeeEEECCC
Q 019979 113 TVYFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~t~p 132 (333)
|.|.+||.. .|+...++|..
T Consensus 90 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 117 (134)
T 2edx_A 90 TEYRVWVRAHTDVGPGPESSPVLVRTDE 117 (134)
T ss_dssp CEEEEEEEEEETTBCCCCCCCEEEECCC
T ss_pred CEEEEEEEEEcCCCcCCCCCCEEeecCC
Confidence 999999853 25567788864
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0015 Score=49.31 Aligned_cols=82 Identities=15% Similarity=0.269 Sum_probs=53.9
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC--C----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDE--S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
++..|..+.+.....+++.|.|..... . ..-.|+|....+...... .......++|.+|+|+
T Consensus 28 P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~i~~L~p~ 95 (124)
T 2ed9_A 28 PSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------------LEPNNLWYLFTGLEKG 95 (124)
T ss_dssp CSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------------ECSSCSEEEEECCCSS
T ss_pred CCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------------ecCCcCEEEEcCCCCC
Confidence 444687888877779999999987643 1 123566766543322110 1223345788999999
Q ss_pred CEEEEEeCc--------CCCeeEEECCC
Q 019979 113 TVYFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~t~p 132 (333)
+.|.+||.. .|+...|+|+.
T Consensus 96 t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 96 SQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp CEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred CEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 999999853 25667788764
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0031 Score=47.43 Aligned_cols=73 Identities=25% Similarity=0.258 Sum_probs=46.5
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCC-CCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPG-GYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
...|..+.+...+.++++|.|.-.... ..-.|+|..... ..+.... . ........++|++|+|++.
T Consensus 18 P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~-~--------~~~~~~~~~~v~~L~p~t~ 88 (121)
T 1x4z_A 18 PEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILAT-S--------AIPPSRLSVEITGLEKGIS 88 (121)
T ss_dssp CCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEE-E--------EECTTCCEEEEESCCTTCE
T ss_pred CccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEee-c--------ccCCCcCEEEECCCCCCCE
Confidence 347888888877899999999843222 223677776542 2221111 1 0122334678899999999
Q ss_pred EEEEeCc
Q 019979 115 YFYRCGR 121 (333)
Q Consensus 115 Y~Y~v~~ 121 (333)
|.|||..
T Consensus 89 Y~frV~A 95 (121)
T 1x4z_A 89 YKFRVRA 95 (121)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0038 Score=45.91 Aligned_cols=80 Identities=16% Similarity=0.141 Sum_probs=52.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+.+...+.+++.|+|.-.... ..-.|+|....+. ... . ........++|+||+|++.|.++|
T Consensus 9 ~~P~~l~v~~~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~~-~~~-------~----~~~~~~ts~~l~~L~p~t~Y~~~V 76 (105)
T 2cum_A 9 EAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQ-TQE-------I----LLPGGITSHQLLGLFPSTSYNARL 76 (105)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTSC-EEE-------E----EECSSCSEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEeccCCEEEEEEcCCCCccceEEEEEEeCCCc-eEE-------E----EECCCccEEEECCCCCCCEEEEEE
Confidence 46888888877899999999865322 2336777754431 100 0 012233467899999999999998
Q ss_pred CcC-------CCeeEEECCC
Q 019979 120 GRQ-------GPEFEFKTPP 132 (333)
Q Consensus 120 ~~~-------s~~~~F~t~p 132 (333)
... .....|+|..
T Consensus 77 ~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 77 QAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp EEEBTTBCCCCEEEEEECCC
T ss_pred EEEeCCcccCCEEEEEEeCC
Confidence 641 2345788864
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0099 Score=44.27 Aligned_cols=81 Identities=15% Similarity=0.169 Sum_probs=50.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+.+...+.+++.|.|......... .|+|............. .... ...+|.+|+|++.|.
T Consensus 19 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~---------~~~~--~~~~v~~L~p~t~Y~ 87 (118)
T 1x3d_A 19 DIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY---------MGSQ--KQFKITKLSPAMGCK 87 (118)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE---------EESC--SEEEEESCCTTCEEE
T ss_pred cCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEee---------ccCC--cEEEeCCCCCCCEEE
Confidence 46777777777799999999886433323 45555443311111100 0111 346789999999999
Q ss_pred EEeCc--------CCCeeEEECCC
Q 019979 117 YRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p 132 (333)
|||.. .|+...++|.+
T Consensus 88 frV~A~n~~G~s~~S~~~~~~T~~ 111 (118)
T 1x3d_A 88 FRLSARNDYGTSGFSEEVLYYTSG 111 (118)
T ss_dssp EECCEEESSCBCCCCCCEEEECSC
T ss_pred EEEEEEECCCCCCCccCEEEEcCC
Confidence 99964 24566777765
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.003 Score=45.84 Aligned_cols=70 Identities=16% Similarity=0.209 Sum_probs=45.8
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
.|..+.++-.+.+++.|+|...... ..-.|+|....+..... .. ...+..-.++|+||+|+|.|.++|.
T Consensus 4 ~P~~l~v~~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~----~~------~~~~~~t~~~l~gL~P~t~Y~~~V~ 73 (98)
T 3tes_A 4 APKNLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAI----NL------TVPGSERSYDLTGLKPGTEYTVSIY 73 (98)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCE----EE------EEETTCSEEEECSCCTTCEEEEEEE
T ss_pred CCCceEEEecCCCeEEEEecCCcCccceEEEEEEECCCCCceE----EE------EcCCCcCEEEECCCCCCCEEEEEEE
Confidence 4788888877799999999876432 23467787654211110 00 0112234678999999999999986
Q ss_pred c
Q 019979 121 R 121 (333)
Q Consensus 121 ~ 121 (333)
.
T Consensus 74 A 74 (98)
T 3tes_A 74 G 74 (98)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0044 Score=44.67 Aligned_cols=71 Identities=14% Similarity=0.185 Sum_probs=46.9
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+.+.-.+.+++.|+|...... ..-.|+|....+....... ........++|.||+|++.|.++|
T Consensus 3 ~~P~~l~v~~~~~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 72 (98)
T 3teu_A 3 DAPTDLQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKEL----------TVPPSSTSVTITGLTPGVEYVVSV 72 (98)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEE----------EECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEEecCCEEEEEEeCCCCcccEEEEEEEECCCCCceEEE----------EcCCCcCEEEecCCCCCCEEEEEE
Confidence 36888888877899999999976422 3346778754432111100 011233467899999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 73 ~A 74 (98)
T 3teu_A 73 YA 74 (98)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00091 Score=59.11 Aligned_cols=68 Identities=18% Similarity=0.168 Sum_probs=42.6
Q ss_pred eEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhh--hcCCceEEccCCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPL--ASARPWMVTQGNHEKE 208 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l--~~~~P~~~~~GNHD~~ 208 (333)
+++++||+|.... ..++++.+.....+-++++||+++.+.... +. ...+..+ ...-.++.+.||||..
T Consensus 57 ~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~--ev-l~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 57 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--ET-ICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHH--HH-HHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcH--HH-HHHHHHHHhhCCCcEEEEecCchhh
Confidence 5899999986532 134445554556678999999998765321 11 2222222 2223589999999973
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0066 Score=45.49 Aligned_cols=74 Identities=15% Similarity=0.225 Sum_probs=38.5
Q ss_pred EEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeEEEEeee--eeecCeEEEEEeCCCCCCCEEEEEeCc
Q 019979 48 ISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYL--FYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (333)
Q Consensus 48 l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 121 (333)
+.-.+.+++++.|.-....+.+ .|+|.................+... ....+....++|+||+|++.|.|||..
T Consensus 11 v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 11 VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCCCCEEEEEEEE
Confidence 5666799999999976443333 5666665221122211111110000 001123446789999999999999964
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0032 Score=48.10 Aligned_cols=80 Identities=23% Similarity=0.315 Sum_probs=50.4
Q ss_pred CCCc-eEEEEecCCCcEEEEEEcCCCCC-Cc-EEEEeccCC-----------CCCeeEEeeEEEEeeeeeecCeEEEEEe
Q 019979 41 SHPQ-QVHISLAGDSHMRVTWITDDESS-PS-VVEYGTSPG-----------GYNCGAEGESTSYRYLFYRSGKIHHTVI 106 (333)
Q Consensus 41 ~~p~-~v~l~~~~~~~~~v~W~t~~~~~-~~-~v~y~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l 106 (333)
..|. .+.+...+.+++++.|....... .. .++|....+ ..+..+. .... ...+|
T Consensus 17 ~~P~~~~~~~~~~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~----------~~~~--~~~~v 84 (127)
T 2dmk_A 17 NPPSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVP----------NIKQ--NHYTV 84 (127)
T ss_dssp CCCEEEEEEEEEETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEE----------EECS--SEEEE
T ss_pred cCCCCCCEEEeeeCCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEee----------cccC--CeEEE
Confidence 3677 77777777999999999875422 22 677865111 0011110 0111 24578
Q ss_pred CCCCCCCEEEEEeCc-------CCCeeEEECCC
Q 019979 107 GPLEHDTVYFYRCGR-------QGPEFEFKTPP 132 (333)
Q Consensus 107 ~~L~p~t~Y~Y~v~~-------~s~~~~F~t~p 132 (333)
+||+|++.|.|||.. .++...++|++
T Consensus 85 ~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~ 117 (127)
T 2dmk_A 85 HGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNS 117 (127)
T ss_dssp ESCCSSCEEEEEEEEEESSCEEECCCEEEECCS
T ss_pred CCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCC
Confidence 899999999999964 24566777765
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0038 Score=47.56 Aligned_cols=84 Identities=17% Similarity=0.283 Sum_probs=53.0
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEE----eccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEY----GTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
++..|..+.+.....+++.|+|..... .......| ...... .. .... ...+.....+|+||+|+
T Consensus 18 P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~~--~~~~--~~~~~~~~~~i~~L~p~ 87 (132)
T 1x5h_A 18 PSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SD--VTET--LVSGTQLSQLIEGLDRG 87 (132)
T ss_dssp CCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EE--EECC--BCCTTCCEEEEECCCSS
T ss_pred CCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------Cc--cEEE--EeCCCccEEEeCCCCCC
Confidence 344678888877779999999998753 22233444 332210 00 0000 12334556789999999
Q ss_pred CEEEEEeCc--------CCCeeEEECCC
Q 019979 113 TVYFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~t~p 132 (333)
+.|.++|.. .|+...|+|.+
T Consensus 88 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 115 (132)
T 1x5h_A 88 TEYNFRVAALTINGTGPATDWLSAETFE 115 (132)
T ss_dssp CEEEEECEEEETTEEEEECCCEEEECCS
T ss_pred CEEEEEEEEEcCCccCCCCcCEEeEcCc
Confidence 999999864 25667888865
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0014 Score=58.74 Aligned_cols=72 Identities=18% Similarity=0.274 Sum_probs=43.7
Q ss_pred CCCeeEEEEeecCCCCC-hhhHHHHhhcCCC-CeEEccccccccccchhhHHHHHHhhhhhh--cCCceEEccCCCCCC
Q 019979 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~~~~i~~~~~-d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~~~GNHD~~ 208 (333)
....+++++||+|.... ..++++.+..... +.+|++||+++.+.... +. ...+..+. ..-.++.+.||||..
T Consensus 61 ~~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~--ev-l~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 61 TPDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSC--EV-ALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp STTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHH--HH-HHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChH--HH-HHHHHHHhhhCCCcEEEecCchhhh
Confidence 46689999999986532 2334444433333 46999999998665321 11 12222221 124588999999963
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0047 Score=46.76 Aligned_cols=76 Identities=14% Similarity=0.101 Sum_probs=47.2
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEecc---CCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCC
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTS---PGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 110 (333)
.....|..+.+.-.+.+++.|.|.-..... .-.|+|... ....+..+... ........++|.||+
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~--------~~~~~~~~~~v~~L~ 87 (124)
T 1wis_A 16 ELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL--------SNEPDARSMEVPDLN 87 (124)
T ss_dssp CCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE--------ESCTTCSEEEECSCC
T ss_pred CCCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE--------ccCCCceEEEeCCCC
Confidence 344578888888777999999996543222 236777763 21112111100 012233467899999
Q ss_pred CCCEEEEEeCc
Q 019979 111 HDTVYFYRCGR 121 (333)
Q Consensus 111 p~t~Y~Y~v~~ 121 (333)
|++.|.|||..
T Consensus 88 p~t~Y~frV~A 98 (124)
T 1wis_A 88 PFTCYSFRMRQ 98 (124)
T ss_dssp TTSEECCCCEE
T ss_pred CCCEEEEEEEE
Confidence 99999999863
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0032 Score=47.13 Aligned_cols=78 Identities=14% Similarity=0.179 Sum_probs=48.3
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCe--eEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNC--GAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
...|.+++++-.+.++++|+|...... ..-.|+|....+.... ...+..... ...+....++|+||+|||.|.
T Consensus 9 pp~p~~L~v~~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~----~v~~~~t~~~l~gL~PgT~Y~ 84 (112)
T 2cui_A 9 RPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQREL----MVPGTRHSAVLRDLRSGTLYS 84 (112)
T ss_dssp CCCCCCCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEE----EEETTCCEEEECSCCTTCEEE
T ss_pred CCCCCceEEEeecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEE----EcCCCcCEEEeCCCCCCCEEE
Confidence 346788888888899999999865322 4457888765432000 000000000 112234478999999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
++|..
T Consensus 85 ~~V~A 89 (112)
T 2cui_A 85 LTLYG 89 (112)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99854
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00085 Score=60.58 Aligned_cols=69 Identities=19% Similarity=0.219 Sum_probs=42.9
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhh--cCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~~~GNHD~~ 208 (333)
-+++++||+|.... ..++++.......+-++++||+++.+.... +. ...+..+. ..-.++.+.||||..
T Consensus 70 ~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~--Ev-l~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSI--EC-VLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHH--HH-HHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCcChH--HH-HHHHHHhhhhcCCcEEEEeCchhhh
Confidence 35899999986532 233444444556788999999998665321 11 12222222 123588999999974
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0041 Score=46.60 Aligned_cols=72 Identities=19% Similarity=0.344 Sum_probs=48.0
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
+..|..+.+.-.+.+++.|+|...... ..-.|+|....+..... . .. ..+....++|+||+|||.|.++
T Consensus 4 P~~P~~L~v~~~t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~---~~----v~~~~ts~~l~gL~P~T~Y~v~ 73 (114)
T 3qwq_B 4 SDVPRDLEVVAATPTSLLISWDSGRGSYQYYRITYGETGGNSPVQ---E---FT----VPGPVHTATISGLKPGVDYTIT 73 (114)
T ss_dssp -CCCEEEEEEEEETTEEEEEEECCSCCCSEEEEEEEESSCSSCCE---E---EE----EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCCceEEEecCCCEEEEEEcCCcCcccEEEEEEEECCCCCccE---E---EE----eCCCcCEEEeCCCCCCCEEEEE
Confidence 347889988877899999999876422 33467887755421100 0 00 1122446889999999999999
Q ss_pred eCc
Q 019979 119 CGR 121 (333)
Q Consensus 119 v~~ 121 (333)
|..
T Consensus 74 V~A 76 (114)
T 3qwq_B 74 VYA 76 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0019 Score=48.41 Aligned_cols=86 Identities=20% Similarity=0.279 Sum_probs=52.2
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
++..|..+.+...+.+++.|+|......... .|+|....+..... +.. ........+.|++|+|++.
T Consensus 18 P~~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-------~~~--~~~~~~~~~~i~~L~p~t~ 88 (121)
T 2dlh_A 18 PSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNN-------WMK--HNVADSQITTIGNLVPQKT 88 (121)
T ss_dssp CCSCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTT-------SCC--CCCSSCSEECCBSCCSSCE
T ss_pred CCCCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccc-------cEE--EecCCceEEEecCCCCCCE
Confidence 4457888877766799999999987433333 34444332211000 000 0111233568899999999
Q ss_pred EEEEeCc--------CCCeeEEECCCC
Q 019979 115 YFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
|.+||.. .|+...|+|.+.
T Consensus 89 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 89 YSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp EEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 9999963 256778888653
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0058 Score=46.29 Aligned_cols=73 Identities=16% Similarity=0.253 Sum_probs=48.1
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
+...|..+.+...+.+++.|+|.-.... ..-.|+|....+..... . . ...+....++|+||+|||.|.+
T Consensus 28 p~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~---~---~----~v~~~~t~~~l~gL~P~t~Y~~ 97 (121)
T 2ocf_D 28 VSDVPTKLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQ---E---F----TVPGSKSTATISGLKPGVDYTI 97 (121)
T ss_dssp -CCSCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEETTTCSCBE---E---E----EEETTCCEEEECCCCTTCEEEE
T ss_pred CCCCCCccEEEecCCCEEEEEEcCCCCCCcEEEEEEEECCCCCccE---E---E----EeCCCcCEEEeCCCCCCCEEEE
Confidence 4467899999888899999999866422 23467777654321100 0 0 0112234688999999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
+|..
T Consensus 98 ~V~A 101 (121)
T 2ocf_D 98 TVYA 101 (121)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0037 Score=45.57 Aligned_cols=70 Identities=14% Similarity=0.191 Sum_probs=46.2
Q ss_pred CCceEEEEecCCCcEEEEEEcCCC---CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDE---SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~---~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
.|..+++.-.+.+++.+.|..... ...-.|+|....+..... . .. .......++|+||+||+.|.++
T Consensus 7 ~P~~l~v~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~---~---~~----v~~~~t~~~l~~L~p~t~Y~~~ 76 (101)
T 3k2m_C 7 VPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQ---E---FT----VPYSSSTATISGLSPGVDYTIT 76 (101)
T ss_dssp SSCEEEEEEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCE---E---EE----EETTCCEEEECSCCTTCEEEEE
T ss_pred CCcceEEeecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCccE---E---EE----cCCCccEEEECCCCCCCEEEEE
Confidence 688888887789999999987641 123367787654321100 0 00 1122346889999999999999
Q ss_pred eCc
Q 019979 119 CGR 121 (333)
Q Consensus 119 v~~ 121 (333)
|..
T Consensus 77 V~A 79 (101)
T 3k2m_C 77 VYA 79 (101)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0055 Score=50.71 Aligned_cols=83 Identities=17% Similarity=0.157 Sum_probs=53.0
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC--------CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCC
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDE--------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~--------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 110 (333)
+...|..+.+...+.++++|+|..... ...-.|+|+........... .......++|++|+
T Consensus 4 P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~ 72 (211)
T 3p4l_A 4 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----------ANATTLSYLVTGLK 72 (211)
T ss_dssp CCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEE-----------EEESSSEEEECSCC
T ss_pred CCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEE-----------eCCCceEEEecCcC
Confidence 345789998887889999999996421 12346777665432111100 11123357789999
Q ss_pred CCCEEEEEeCc--------CCCeeEEECCC
Q 019979 111 HDTVYFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~t~p 132 (333)
|++.|.++|.. .+....++|..
T Consensus 73 p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~ 102 (211)
T 3p4l_A 73 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 102 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CCCEEEEEEEEEcCCCCCccceeEeeeccc
Confidence 99999999863 24567788854
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0095 Score=41.96 Aligned_cols=66 Identities=18% Similarity=0.352 Sum_probs=42.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
..|..+.+...+.+++.++|..... ......|....+. ... +. ... -...+++|+||+.|+|+|.
T Consensus 5 ~~P~~l~~~~~~~~sv~L~W~~~~~-~~~i~~Y~v~~~~-~~~--~~---------~~~--~~~~~~~L~~~t~Y~~~V~ 69 (88)
T 1k85_A 5 TAPTNLASTAQTTSSITLSWTASTD-NVGVTGYDVYNGT-ALA--TT---------VTG--TTATISGLAADTSYTFTVK 69 (88)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSC-CSSEEEEEEEESS-SEE--EE---------ESS--SEEEECCCCSSCEEEEEEE
T ss_pred CCCCccEEEeccCCEEEEEECCCCC-CCCccEEEEEECC-EEE--ee---------cCC--CEEEeCCCCCCCEEEEEEE
Confidence 4688888887789999999987642 2234555443211 111 01 111 1456889999999999986
Q ss_pred c
Q 019979 121 R 121 (333)
Q Consensus 121 ~ 121 (333)
.
T Consensus 70 A 70 (88)
T 1k85_A 70 A 70 (88)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0047 Score=46.10 Aligned_cols=80 Identities=11% Similarity=0.049 Sum_probs=51.0
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+++...+.+++.|+|.-.... ..-.|+|....+... . . ...+....++|+||+|+|.|.++|
T Consensus 9 ~~P~~l~~~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~-~-------~----~v~~~~t~~~l~~L~P~t~Y~~~V 76 (115)
T 2cuh_A 9 DGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-Q-------A----ETPGSAVDYPLHDLVLHTNYTATV 76 (115)
T ss_dssp SSCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSCCE-E-------E----EEETTCSEEEECSCCSSSEEEEEE
T ss_pred CCCcceEEEeccCCeEEEEEECCCCCccEEEEEEEcCCCCcE-E-------E----EECCCccEEEEeCCCCCCEEEEEE
Confidence 36888877766799999999865322 234577765432111 0 0 011223467899999999999998
Q ss_pred CcC-------CCeeEEECCC
Q 019979 120 GRQ-------GPEFEFKTPP 132 (333)
Q Consensus 120 ~~~-------s~~~~F~t~p 132 (333)
... .....|+|.+
T Consensus 77 ~A~~~~~~s~~~~~~~~T~~ 96 (115)
T 2cuh_A 77 RGLRGPNLTSPASITFTTGL 96 (115)
T ss_dssp EEEETTEECCCEEEEEESCC
T ss_pred EEEeCCCcCCCEEEEEEeCC
Confidence 641 2345688865
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0051 Score=45.34 Aligned_cols=71 Identities=20% Similarity=0.173 Sum_probs=44.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC-C----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS-P----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~-~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
..|..+.+...+.++++|.|....... . -.|+|............ .........+|++|+|++.|
T Consensus 9 ~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~----------~~~~~~~~~~v~~L~p~t~Y 78 (110)
T 2yuw_A 9 SPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVAN----------KDLIDKTKFTITGLPTDAKI 78 (110)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECC----------SSCCCSSEEEECSCCTTCEE
T ss_pred CCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEec----------cccCccCEEEECCCCCCCEE
Confidence 478888888777999999999764221 1 24566654332111110 01112335678999999999
Q ss_pred EEEeCc
Q 019979 116 FYRCGR 121 (333)
Q Consensus 116 ~Y~v~~ 121 (333)
.|||..
T Consensus 79 ~frV~A 84 (110)
T 2yuw_A 79 FVRVKA 84 (110)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.004 Score=45.97 Aligned_cols=80 Identities=11% Similarity=0.075 Sum_probs=48.7
Q ss_pred CCCceEEEE-ecCCCcEEEEEEcCCC-C----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 41 SHPQQVHIS-LAGDSHMRVTWITDDE-S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 41 ~~p~~v~l~-~~~~~~~~v~W~t~~~-~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
..|..+.+. ..+.+++.|.|..... . ..-.|+|....+.....+. . . .....+|++|+|++.
T Consensus 10 ~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~--~~~~~~v~~L~p~t~ 77 (110)
T 2crz_A 10 GPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-Q---------G--SEVECTVSSLLPGKT 77 (110)
T ss_dssp CCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-E---------E--SCSEEEEESCCTTCE
T ss_pred CCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE-e---------C--CcEEEEECCcCCCCE
Confidence 367777663 3457899999965421 1 2246777654432222111 0 1 123467889999999
Q ss_pred EEEEeCc--------CCCeeEEECCC
Q 019979 115 YFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~p 132 (333)
|.|||.. .|+...++|.+
T Consensus 78 Y~frV~A~n~~G~g~~S~~~~~~T~~ 103 (110)
T 2crz_A 78 YSFRLRAANKMGFGPFSEKCDITTAP 103 (110)
T ss_dssp EEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEcCCccCCCCCccccccCC
Confidence 9999863 25667777765
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0014 Score=58.37 Aligned_cols=71 Identities=14% Similarity=0.141 Sum_probs=42.2
Q ss_pred CCeeEEEEeecCCCCC-hhhHHHHhhcC-CCCeEEccccccccccchhhHHHHHHhhhhhh--cCCceEEccCCCCCC
Q 019979 135 FPITFAVAGDLGQTGW-TKSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~~~~i~~~-~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~~~GNHD~~ 208 (333)
...+++++||+|.... ..++++..... ..+.++++||+++.+... -+. ...+..+. ..-.++.+.||||..
T Consensus 58 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s--~ev-l~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 58 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFS--VEV-ILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTH--HHH-HHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcCh--HHH-HHHHHHhhhhcCCcEEEEecCcccc
Confidence 4578999999986521 12344444332 335699999999876531 111 22222221 123588899999973
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0014 Score=62.11 Aligned_cols=71 Identities=14% Similarity=0.132 Sum_probs=43.0
Q ss_pred CCeeEEEEeecCCCCC-hhhHHHHhhcCC-CCeEEccccccccccchhhHHHHHHhhhhh--hcCCceEEccCCCCCC
Q 019979 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCK-YDVHLLPGDLSYADYMQHRWDTFGELVQPL--ASARPWMVTQGNHEKE 208 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~~~~i~~~~-~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l--~~~~P~~~~~GNHD~~ 208 (333)
...+++++||+|.... ..++++.+.... .+.+|++||+++.+... -+. ...+..+ .....++.+.||||..
T Consensus 211 ~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s--~e~-~~~l~~l~~~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 211 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFS--VEV-ILTLFGFKLLYPDHFHLLRGNHETD 285 (477)
T ss_dssp SSCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTH--HHH-HHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCcch--HHH-HHHHHHHHhhCCCceEeecCCccHH
Confidence 4578999999986521 133444443333 35699999999866531 111 1222222 2235789999999963
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0022 Score=47.03 Aligned_cols=71 Identities=17% Similarity=0.249 Sum_probs=46.7
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC----CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDE----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+++.-.+.+++.|+|..... ...-.|+|.......... . . ...+....++|+||+|+|.|.
T Consensus 9 ~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~---~---~----~v~~~~ts~~l~~L~p~t~Y~ 78 (103)
T 3t04_D 9 SVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ---E---F----TVPGYYSTATISGLKPGVDYT 78 (103)
T ss_dssp CCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE---E---E----EEETTCCEEEECSCCTTCCEE
T ss_pred CCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccE---E---E----EcCCCcCEEEeCCCCCCCEEE
Confidence 4688888887789999999987642 122367787653211110 0 0 011224568899999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
++|..
T Consensus 79 ~~V~A 83 (103)
T 3t04_D 79 ITVYA 83 (103)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99853
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0063 Score=45.96 Aligned_cols=83 Identities=16% Similarity=0.092 Sum_probs=48.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC-C----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS-P----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~-~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
.|..+.+.....+ +.|+|.-..... . -.|+|.......+.... ... ........++|++|+|+|.|.
T Consensus 10 ~P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~------~~~-~~~~~~~~~~i~~L~p~t~Y~ 81 (122)
T 2e3v_A 10 SPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW------YDA-KEASMEGIVTIVGLKPETTYA 81 (122)
T ss_dssp CCEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEE------EEH-HHHHTTTEEEECSCCTTCEEE
T ss_pred CCCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccce------eee-eecCccceEEeCCCCCCCEEE
Confidence 3888877766666 999999764322 1 24666655432221110 000 011123357899999999999
Q ss_pred EEeCc--------CCCeeEEECCC
Q 019979 117 YRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p 132 (333)
+||.. .|+...|+|.|
T Consensus 82 ~rV~A~n~~G~g~~S~~~~~~t~~ 105 (122)
T 2e3v_A 82 VRLAALNGKGLGEISAASEFKTQP 105 (122)
T ss_dssp EEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEeCCccCCCcccccccccC
Confidence 99863 25566777755
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0036 Score=46.32 Aligned_cols=72 Identities=17% Similarity=0.197 Sum_probs=46.0
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
...|..+.+...+.++++|+|...... ..-.|+|.......+.... . ........+|++|+|++.
T Consensus 9 P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~-~---------~~~~~~~~~v~~L~p~t~ 78 (111)
T 1x5y_A 9 TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN-K---------EPVERCGFTVKDLPTGAR 78 (111)
T ss_dssp CCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS-S---------SCBSSSEEEEECCCTTCC
T ss_pred CcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEcc-c---------cCCcccEEEECCCCCCCE
Confidence 347888888877899999999975422 2235667654432221110 0 111233567889999999
Q ss_pred EEEEeCc
Q 019979 115 YFYRCGR 121 (333)
Q Consensus 115 Y~Y~v~~ 121 (333)
|.|||..
T Consensus 79 Y~frV~A 85 (111)
T 1x5y_A 79 ILFRVVG 85 (111)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0064 Score=45.96 Aligned_cols=87 Identities=13% Similarity=0.140 Sum_probs=52.0
Q ss_pred CCCCCCceEEEE-ecCCCcEEEEEEcC--CCCCCc----EEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCC
Q 019979 38 KPSSHPQQVHIS-LAGDSHMRVTWITD--DESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (333)
Q Consensus 38 ~~~~~p~~v~l~-~~~~~~~~v~W~t~--~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 110 (333)
.++..|..+.+. ..+.+++.|+|.-. ...... .|+|....... ... ... ........++|++|+
T Consensus 17 ~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~----~~~---~~~--~~~~~~~~~~l~~L~ 87 (124)
T 2dbj_A 17 APSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGI----SKE---LLE--EVGQNGSRARISVQV 87 (124)
T ss_dssp CCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTE----EEE---EEE--EEESTTSCEEEECCC
T ss_pred CCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCC----ccc---eEE--EeCCCcceEEecCCC
Confidence 344578888887 35689999999876 222222 34443221110 000 000 011223456789999
Q ss_pred CCCEEEEEeCc--------CCCeeEEECCCC
Q 019979 111 HDTVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
|++.|.+||.. .|+...++|++.
T Consensus 88 p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 88 HNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp SSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred CCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 99999999863 267788888765
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0087 Score=44.39 Aligned_cols=82 Identities=13% Similarity=0.073 Sum_probs=51.9
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
...|..+.+.- ..+++.+.|.-.... ..-.|+|+... ..+..+. .. ........+|.+|+||+.|
T Consensus 8 ~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~~-~~W~~~~-~~--------~~~~~t~~~v~~L~pg~~Y 76 (108)
T 1v5j_A 8 LSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGS-QGWEVLD-PA--------VAGTETELLVPGLIKDVLY 76 (108)
T ss_dssp CCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETT-CCCEEEE-EE--------ECSSCCEEECCCCCTTSCE
T ss_pred CCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeCC-CCcEEee-ee--------cCCCcCEEEeCCCCCCCEE
Confidence 35788887764 467899999987532 23378888732 2222211 10 1223345679999999999
Q ss_pred EEEeCc--------CCCeeEEECCC
Q 019979 116 FYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p 132 (333)
.|||.. .|+...++|..
T Consensus 77 ~FRV~A~n~~G~s~pS~~~~v~T~~ 101 (108)
T 1v5j_A 77 EFRLVAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp ECCBEEEETTEEEEECSCCCCCCSS
T ss_pred EEEEEEEcCCCCcCCCCCEEEEeCC
Confidence 999864 14566666654
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0054 Score=45.11 Aligned_cols=68 Identities=15% Similarity=0.207 Sum_probs=42.0
Q ss_pred CCCceEEEEec-CCCcEEEEEEcCCCCCCcEEEEeccCC--CCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 41 SHPQQVHISLA-GDSHMRVTWITDDESSPSVVEYGTSPG--GYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 41 ~~p~~v~l~~~-~~~~~~v~W~t~~~~~~~~v~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
..|..+.++.. +.+++.++|.... .......|+.... .+...+.+. ... .-+.++|+||++|+|
T Consensus 6 ~aP~~l~a~~~~~~~~v~LsW~~~~-~~~~Y~VyR~~~~~~~~~~i~~~~----------~~t--sy~d~~l~~g~~Y~Y 72 (103)
T 3mpc_A 6 AFPTGLSAVLDSSGNTANLTWNAAP-GANSYNVKRSTKSGGPYTTIATNI----------TST--NYTDTGVATGTKYYY 72 (103)
T ss_dssp CCCEEEEEEECTTSCCEEEEEECCT-TCSEEEEEEESSTTCCCEEEEEEE----------CSS--EEEETTCCTTCCCEE
T ss_pred CCCceeEEEEeCCCCEEEEEEECCC-CCCEEEEEEecCCCCCcEEEeecC----------CCC--EEEECCCCCCCEEEE
Confidence 37888887765 3689999999864 3445555655432 222222111 111 223479999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
+|..
T Consensus 73 ~V~A 76 (103)
T 3mpc_A 73 VVSA 76 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9963
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.014 Score=42.51 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=43.5
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|. +.|...+.+++.|.|....... .-.|+|............ ........+|++|+|++.|.+
T Consensus 10 ~p~-~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 77 (107)
T 2dn7_A 10 RPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----------FGKDDQHFTVTGLHKGTTYIF 77 (107)
T ss_dssp CCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----------EETTCCEEEEECCCTTCEEEE
T ss_pred CCc-EeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEE-----------eCCCccEEEeCCCCCCCEEEE
Confidence 455 6677667899999999764222 236777765432221110 112233577899999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
||..
T Consensus 78 ~V~A 81 (107)
T 2dn7_A 78 RLAA 81 (107)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0031 Score=47.56 Aligned_cols=89 Identities=18% Similarity=0.225 Sum_probs=54.1
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC------CCCcEEEEeccCCCCCe---eEEeeEEEEeeeeeecCeEEEEEeCCC
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGYNC---GAEGESTSYRYLFYRSGKIHHTVIGPL 109 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~L 109 (333)
++..|..+.+.....+++.|+|..... ...-.|+|......... ........ ..+....++|+||
T Consensus 14 P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~L 87 (125)
T 1uen_A 14 PMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILT------FQGSKTHGMLPGL 87 (125)
T ss_dssp CCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEE------EESSCSEEEEESC
T ss_pred CCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEE------ecCCccEEEeCCC
Confidence 345788888877778999999987521 11235666655432211 00001100 1123346789999
Q ss_pred CCCCEEEEEeCc--------CCCeeEEECCCC
Q 019979 110 EHDTVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
+|+|.|.++|.. .|+...|+|.+.
T Consensus 88 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 88 EPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 999999999863 256677888653
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0014 Score=61.70 Aligned_cols=69 Identities=19% Similarity=0.217 Sum_probs=41.4
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhh--cCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~~~GNHD~~ 208 (333)
.+++++||+|.... ..++++.......+-+|++||+++.+.... + ....+..+. ..-.++.+.||||..
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~--E-vl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSI--E-CVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHH--H-HHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHH--H-HHHHHHHHhhhCCCeEEEecCCccHH
Confidence 46899999985532 123343222345688999999998765321 1 112222222 123488999999973
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0042 Score=44.85 Aligned_cols=71 Identities=20% Similarity=0.263 Sum_probs=46.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+++.-.+.+++.|.|...... ..-.|+|....+..... . . ...+....++|+||+|+|.|.++|
T Consensus 6 ~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~---~-~------~v~~~~t~~~l~~L~p~t~Y~v~V 75 (97)
T 3qht_C 6 SVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQ---E-F------TVPGSSSTATISGLSPGVDYTITV 75 (97)
T ss_dssp CSSSSCEEEEEETTEEEEECCCCCSSCCEEEEEEEESSSCSCCE---E-E------EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEecCCCEEEEEEeCCCCCCCEEEEEEEECCCCCccE---E-E------EeCCCcCEEEeCCCCCCCEEEEEE
Confidence 46888888877799999999865322 23467787654321110 0 0 012234468899999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 76 ~A 77 (97)
T 3qht_C 76 YA 77 (97)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0038 Score=48.53 Aligned_cols=77 Identities=12% Similarity=0.046 Sum_probs=46.4
Q ss_pred EEEEecCCCcEEEEEEcCCCC-C------------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 46 VHISLAGDSHMRVTWITDDES-S------------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 46 v~l~~~~~~~~~v~W~t~~~~-~------------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
+.+...++++++++|.-.... . .-.|+|..+........ . ..+-...++|+||+|+
T Consensus 24 p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~-----~------~~g~~ts~~v~~L~P~ 92 (137)
T 1wk0_A 24 PVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKS-----V------YVGEETNITLNDLKPA 92 (137)
T ss_dssp CEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEE-----E------EEESCSEEEECSCCTT
T ss_pred cEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEE-----E------EecCccEEEEcCCCCC
Confidence 335666799999999875432 1 11234433322111110 0 0112246789999999
Q ss_pred CEEEEEeCc--------CCCeeEEECCCC
Q 019979 113 TVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
|.|.+||.. .|+...|+|++.
T Consensus 93 T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 93 MDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp CEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred CEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 999999953 267788999754
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0028 Score=45.40 Aligned_cols=70 Identities=14% Similarity=0.265 Sum_probs=45.4
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
.|..+++...+.+++.|+|.-.... ..-.|+|....+... . ... ...+-...++|+||+||+.|.++|.
T Consensus 4 ~P~~l~~~~~~~~si~lsW~~p~~~i~~Y~v~y~~~~~~~~-----~--~~~---~~~~~~~~~~l~~L~p~t~Y~~~V~ 73 (94)
T 1j8k_A 4 RPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIH-----E--LFP---APDGEEDTAELQGLRPGSEYTVSVV 73 (94)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEEE-----E--ECC---CCCSSCCEEEECSCCCCSEEEEEEE
T ss_pred CCCccEEEeecCCEEEEEEcCCCCCcceEEEEEEeCCCCCc-----e--EEe---cCCCCccEEEeCCCCCCCEEEEEEE
Confidence 5778888877799999999665321 234677776542100 0 000 1123345788999999999999986
Q ss_pred c
Q 019979 121 R 121 (333)
Q Consensus 121 ~ 121 (333)
.
T Consensus 74 A 74 (94)
T 1j8k_A 74 A 74 (94)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=96.63 E-value=0.011 Score=47.79 Aligned_cols=82 Identities=17% Similarity=0.125 Sum_probs=50.6
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
...|..+.+...+.+++.|+|.-.... ..-.|+|....+....... ..+.....+|+||+||+.|.++
T Consensus 95 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~ 163 (186)
T 1qr4_A 95 VGSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----------VDGSKTRTKLVKLVPGVDYNVN 163 (186)
T ss_dssp CCCCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----------EETTCCEEEECSCCSSCEEEEE
T ss_pred CCCCCccEEEEeCCCEEEEEEECCCCcccEEEEEEEeCCCCCceEEE-----------cCCCcCEEEEcCCCCCCEEEEE
Confidence 346788877766789999999865322 3346777765432111110 1122346789999999999999
Q ss_pred eCcC-----C--CeeEEECCC
Q 019979 119 CGRQ-----G--PEFEFKTPP 132 (333)
Q Consensus 119 v~~~-----s--~~~~F~t~p 132 (333)
|... | ....|+|.|
T Consensus 164 V~A~~~~g~s~p~~~~~~T~p 184 (186)
T 1qr4_A 164 IISVKGFEESEPISGILKTAL 184 (186)
T ss_dssp EEEEETTEECCCEEEEEEC--
T ss_pred EEEEcCCCcCcCEEEEEEecC
Confidence 8641 2 235677766
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.015 Score=47.04 Aligned_cols=69 Identities=14% Similarity=0.189 Sum_probs=45.6
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
.|..+.+...+.+++.|.|...... ..-.|+|.............. .......+++|+|++.|.
T Consensus 8 ~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t~Y~ 76 (197)
T 3lpw_A 8 PPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGCSYY 76 (197)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTCEEE
T ss_pred CCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCCEEE
Confidence 7888888877899999999976321 223667766543322221100 112356789999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
|+|..
T Consensus 77 ~~V~a 81 (197)
T 3lpw_A 77 FRVLA 81 (197)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99863
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.012 Score=43.91 Aligned_cols=79 Identities=18% Similarity=0.222 Sum_probs=47.4
Q ss_pred CCceEEEE-ecCCCcEEEEEEcCCCC-----CCcEEEEeccCCC-CCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 42 HPQQVHIS-LAGDSHMRVTWITDDES-----SPSVVEYGTSPGG-YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 42 ~p~~v~l~-~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
.|....+. -.+.+++.|.|...... ..-.|+|...... ....+. .+.....+|++|+|++.
T Consensus 20 ~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~~v~~L~p~t~ 87 (120)
T 2crm_A 20 IPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY------------SGATREHLCDRLNPGCF 87 (120)
T ss_dssp CCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE------------CSSCSEEEECSCCTTSC
T ss_pred CCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE------------eccccEEEECCCCCCCE
Confidence 55555555 44588999999865332 2235666655431 111110 11133567899999999
Q ss_pred EEEEeCc--------CCCeeEEECCC
Q 019979 115 YFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~p 132 (333)
|.|||.. .|+...++|.+
T Consensus 88 Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 2crm_A 88 YRLRVYCISDGGQSAVSESLLVQTPA 113 (120)
T ss_dssp EEEEEEEEETTEECCCCCCCCCCCCC
T ss_pred EEEEEEEEcCCccCCCcccEEEEcCC
Confidence 9999964 24556666654
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=96.48 E-value=0.02 Score=48.21 Aligned_cols=83 Identities=13% Similarity=0.113 Sum_probs=54.4
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
+...|..+.+...+.++++|+|.-... ...-.|+|....+....... ........+|+||+|+|.|.+
T Consensus 5 p~~~P~~l~~~~~~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 73 (234)
T 3f7q_A 5 DLGAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHL-----------LDSKVPSVELTNLYPYCDYEM 73 (234)
T ss_dssp CCCCCEEEEEEECSSSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEE-----------EEESSSEEEECSCCTTCEEEE
T ss_pred CCCCCcceEEEEcCCCEEEEEEECCCCccceEEEEEEECCCCccceEE-----------EcCCccEEEECCCCCCCEEEE
Confidence 446799998888889999999987632 23346777765432211100 001223577899999999999
Q ss_pred EeCc--------CCCeeEEECCC
Q 019979 118 RCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 118 ~v~~--------~s~~~~F~t~p 132 (333)
+|.. .+....++|..
T Consensus 74 ~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 74 KVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp EEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEeCCCcCCCCCeEEEEcCC
Confidence 9853 24567788763
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.013 Score=44.28 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=44.9
Q ss_pred CCCcEEEEEEcCCCC---CCcEEEEeccCCC---CCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCc----
Q 019979 52 GDSHMRVTWITDDES---SPSVVEYGTSPGG---YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR---- 121 (333)
Q Consensus 52 ~~~~~~v~W~t~~~~---~~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~---- 121 (333)
+++++.|+|.-.... ..-.|.|+..... ...... . ...+-...++|+||+|+|.|.++|..
T Consensus 28 sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~------~---v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~ 98 (120)
T 1ujt_A 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNL------D---AKVPTERSAVLVNLKKGVTYEIKVRPYFNE 98 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEE------E---CCCTTCCEEEEESCCSSEEEEEEEEEESSS
T ss_pred cCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEE------E---ecCCCcCEEEECCCCCCCEEEEEEEEECCC
Confidence 478999999964221 1237888876531 111100 0 01223456889999999999999853
Q ss_pred ----CCCeeEEECCC
Q 019979 122 ----QGPEFEFKTPP 132 (333)
Q Consensus 122 ----~s~~~~F~t~p 132 (333)
.|+...|+|+.
T Consensus 99 G~Gp~S~~v~~~T~e 113 (120)
T 1ujt_A 99 FQGMDSESKTVRTTE 113 (120)
T ss_dssp CCCCCCCCEEEEECS
T ss_pred ccCCCCCCEEEECCC
Confidence 25667788764
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.02 Score=42.15 Aligned_cols=76 Identities=14% Similarity=0.091 Sum_probs=49.6
Q ss_pred cCCCCCCCCCceEEEEecC--CCcEEEEEEcCCC---C----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEE
Q 019979 34 PWDPKPSSHPQQVHISLAG--DSHMRVTWITDDE---S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHT 104 (333)
Q Consensus 34 ~~~~~~~~~p~~v~l~~~~--~~~~~v~W~t~~~---~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (333)
|++......|..+.+.... .+++.|+|..... + -.-.|+|....+........ .. ...+
T Consensus 2 P~~ivkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~----------~~--~~~~ 69 (109)
T 1uc6_A 2 PLGSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL----------SN--GTAH 69 (109)
T ss_dssp CTTSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE----------SS--CSEE
T ss_pred CcCEEecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEec----------cc--CCEE
Confidence 4444455688998888653 6899999997642 1 23467888765432221110 11 1356
Q ss_pred EeCCCCCCCEEEEEeCc
Q 019979 105 VIGPLEHDTVYFYRCGR 121 (333)
Q Consensus 105 ~l~~L~p~t~Y~Y~v~~ 121 (333)
.|.+|+||+.|.+||..
T Consensus 70 ~l~~L~p~t~Y~~~VRa 86 (109)
T 1uc6_A 70 TITDAYAGKEYIIQVAA 86 (109)
T ss_dssp EETTCCSSSCEEEEEEC
T ss_pred EEeCCCCCCEEEEEEEE
Confidence 78999999999999964
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0083 Score=45.04 Aligned_cols=70 Identities=14% Similarity=0.150 Sum_probs=46.1
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
..|..+.+...+.+++.|.|...... ..-.|+|.......+..+. ........+|++|+|++.|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~-----------~~~~~~~~~v~~L~p~t~Y 87 (120)
T 2yux_A 19 GPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVI-----------EHYHRTSATITELVIGNEY 87 (120)
T ss_dssp CCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEE-----------SSCCSSCCEECCCCSSEEE
T ss_pred CcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEee-----------ecCCcCEEEECCCCCCCEE
Confidence 47888888767789999999865322 2346778765433222211 0112234578999999999
Q ss_pred EEEeCc
Q 019979 116 FYRCGR 121 (333)
Q Consensus 116 ~Y~v~~ 121 (333)
.|||..
T Consensus 88 ~frV~A 93 (120)
T 2yux_A 88 YFRVFS 93 (120)
T ss_dssp EEEECC
T ss_pred EEEEEE
Confidence 999975
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.019 Score=48.06 Aligned_cols=91 Identities=15% Similarity=0.152 Sum_probs=58.3
Q ss_pred cCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeC
Q 019979 34 PWDPKPSSHPQQVHISLAGDSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (333)
Q Consensus 34 ~~~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 107 (333)
|+.+.-...|..+++...+.++..|+|....... .-.|+|...... ....... ........+.|.
T Consensus 100 P~~~vk~~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~~~~--------~~~~~~~~~~l~ 170 (214)
T 2b5i_B 100 PFENLRLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEAPLL--------TLKQKQEWICLE 170 (214)
T ss_dssp GGGSBCCCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTSCCE--------EECSCCCEEEEC
T ss_pred cccccCCCCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCC-hheeeee--------eecccceEEEec
Confidence 4444445678899888777789999999874321 236777765431 1111000 011224467789
Q ss_pred CCCCCCEEEEEeCc------------CCCeeEEECCCC
Q 019979 108 PLEHDTVYFYRCGR------------QGPEFEFKTPPA 133 (333)
Q Consensus 108 ~L~p~t~Y~Y~v~~------------~s~~~~F~t~p~ 133 (333)
+|+||+.|..||.. +|+...|+|.+.
T Consensus 171 ~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 171 TLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp SCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred cCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 99999999999862 256688999774
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.012 Score=48.50 Aligned_cols=82 Identities=16% Similarity=0.172 Sum_probs=50.1
Q ss_pred CCCceEEEEecCCCcEEEEEEcCC-----CCCCcEEEEeccCCC-CCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDD-----ESSPSVVEYGTSPGG-YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~-----~~~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
..|..+.+...+.+++.|+|.... ....-.|+|+..... ...... .........+|+||+|++.
T Consensus 117 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~ 186 (214)
T 2ibg_A 117 PVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT----------IEGAHARSFKIAPLETATM 186 (214)
T ss_dssp CCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE----------EECTTCCEEEECSCCTTCE
T ss_pred CCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEee----------ccCCcceEEEeCCCCCCCE
Confidence 356766666556889999999863 112336777765431 111110 0111123567899999999
Q ss_pred EEEEeCc--------CCCeeEEECCC
Q 019979 115 YFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~p 132 (333)
|.|||.. .|+...++|..
T Consensus 187 Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 187 YEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEcCCccCCCcceEeeEecC
Confidence 9999863 25567777753
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0068 Score=45.17 Aligned_cols=71 Identities=21% Similarity=0.302 Sum_probs=44.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
..|..+.+...+.+++.|.|......+ .-.|+|....+...... . ........++|+||+|++.|.+
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~-------~---~~~~~~~~~~i~~L~p~t~Y~~ 88 (118)
T 2yrz_A 19 DTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRL-------N---IPNPAQTSVVVEDLLPNHSYVF 88 (118)
T ss_dssp CCCCCCEECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEE-------E---ESCTTCCEEEEESCCTTCEEEE
T ss_pred CCCCceEEEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEE-------E---cCCCCcCEEEeCCCCCCCEEEE
Confidence 467777777667899999998764331 12455655433211110 0 1112234678899999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
||..
T Consensus 89 ~V~A 92 (118)
T 2yrz_A 89 RVRA 92 (118)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0049 Score=46.71 Aligned_cols=31 Identities=26% Similarity=0.331 Sum_probs=24.5
Q ss_pred EEEeCCCCCCCEEEEEeCc--------CCCeeEEECCCC
Q 019979 103 HTVIGPLEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 103 ~~~l~~L~p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
.++|+||+|+|.|.|||.. .|+...++|.+.
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 4788999999999999964 156678888753
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0043 Score=46.01 Aligned_cols=70 Identities=14% Similarity=0.182 Sum_probs=43.3
Q ss_pred CCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCc------
Q 019979 52 GDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR------ 121 (333)
Q Consensus 52 ~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~------ 121 (333)
+.++++|.|...... ..-.|+|............ .. .....+|+||+|++.|.|||..
T Consensus 23 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~--~~~~~~v~~L~p~t~Y~frV~A~n~~G~ 90 (110)
T 2db8_A 23 HNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY----------VG--KETMCTVDGLHFNSTYNARVKAFNKTGV 90 (110)
T ss_dssp SSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEE----------EE--SCSCEEEECCCSSSCCEEEEEEECSSCB
T ss_pred CCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEE----------eC--CcCEEEECCCCCCCEEEEEEEEEeCCcC
Confidence 478999999876432 2235777664322111111 01 1124578899999999999853
Q ss_pred --CCCeeEEECCCC
Q 019979 122 --QGPEFEFKTPPA 133 (333)
Q Consensus 122 --~s~~~~F~t~p~ 133 (333)
.|+...++|.+.
T Consensus 91 s~~S~~~~~~T~~~ 104 (110)
T 2db8_A 91 SPYSKTLVLQTSEG 104 (110)
T ss_dssp CCCCSCEECCCCCC
T ss_pred CCCCCCEEEEcCCC
Confidence 256678888764
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.016 Score=46.71 Aligned_cols=81 Identities=11% Similarity=0.142 Sum_probs=51.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+.+...+.+++.|+|.-.... ..-.|+|....+. ... . ........+.|+||+|++.|.|+|
T Consensus 8 ~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~-~~~-------~----~~~~~~~~~~i~~L~p~t~Y~~~V 75 (186)
T 1qr4_A 8 DNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGK-KNE-------M----EIPVDSTSFILRGLDAGTEYTISL 75 (186)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECTTCC-EEE-------E----EECTTCSEEEEESCCSSCEEEEEE
T ss_pred cCCCceEEEecCCCEEEEEEeCCCCCccEEEEEEEeCCCC-eeE-------E----ECCCCCCEEEECCCCCCCEEEEEE
Confidence 47888888877899999999975332 3446777743321 000 0 011223356789999999999998
Q ss_pred Cc-----CC--CeeEEECCCC
Q 019979 120 GR-----QG--PEFEFKTPPA 133 (333)
Q Consensus 120 ~~-----~s--~~~~F~t~p~ 133 (333)
.. .+ ....++|+|.
T Consensus 76 ~a~~~~~~s~~~~~~~~t~p~ 96 (186)
T 1qr4_A 76 VAEKGRHKSKPTTIKGSTVVG 96 (186)
T ss_dssp EEESSSCBCCCEEEEEECCCC
T ss_pred EEEcCCccCCCEEEEEECCCC
Confidence 64 12 2456777654
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.036 Score=41.73 Aligned_cols=82 Identities=13% Similarity=0.185 Sum_probs=48.1
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCC-CCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGG-YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
..|..+.+...+.+++.|.|.-...... -.|+|...... ........ . .... .. .+.+|+|++.|
T Consensus 18 ~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~------~-~~~~-~~--~i~~L~p~t~Y 87 (127)
T 1uey_A 18 NPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------V-SGTQ-TT--AQLNLSPYVNY 87 (127)
T ss_dssp CCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEE------E-ESSC-CE--EEECCCTTCEE
T ss_pred cCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEee------e-CCCc-eE--EEecCCCCCEE
Confidence 4788888887779999999996533232 24556554321 11111100 0 0111 12 36699999999
Q ss_pred EEEeCc--------CCCe-eEEECCC
Q 019979 116 FYRCGR--------QGPE-FEFKTPP 132 (333)
Q Consensus 116 ~Y~v~~--------~s~~-~~F~t~p 132 (333)
.|||.. .|+. ..|+|.+
T Consensus 88 ~frV~A~n~~G~s~~S~~~~~~~T~~ 113 (127)
T 1uey_A 88 SFRVMAVNSIGKSLPSEASEQYLTKA 113 (127)
T ss_dssp CCEEEEEESSCBCCCCSCCCCEECCC
T ss_pred EEEEEEEeCCccCCccccccceEcCC
Confidence 999863 1333 4677754
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.014 Score=43.18 Aligned_cols=71 Identities=10% Similarity=0.202 Sum_probs=43.4
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+.+...+.+++.|.|....... .-.|+|....+........ ........+|++|+|++.|.
T Consensus 17 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~Y~ 86 (117)
T 1uem_A 17 GPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA----------NHVKTTLYTVRGLRPNTIYL 86 (117)
T ss_dssp BCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE----------EEECSSEEEECSCCTTCEEE
T ss_pred cCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcc----------cccCcCEEEECCCCCCCEEE
Confidence 367788888777999999998654222 2356665543111110000 00112256889999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
|||..
T Consensus 87 frV~A 91 (117)
T 1uem_A 87 FMVRA 91 (117)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.012 Score=44.03 Aligned_cols=71 Identities=13% Similarity=0.150 Sum_probs=42.5
Q ss_pred CCCceE--EEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 41 SHPQQV--HISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 41 ~~p~~v--~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
..|..+ .+...+.+++.|.|.-...... -.|+|....+. +..... ...+....++|+||+|++.
T Consensus 19 ~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~~~~~~---------~~~~~~~~~~v~~L~p~t~ 88 (121)
T 1wf5_A 19 HAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAP-WTVLLA---------SVDPKATSVTVKGLVPARS 88 (121)
T ss_dssp CCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCC-CEEEES---------SCCTTCCEEEEESCCTTCE
T ss_pred ccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCCCC-ceEeEc---------ccCCCccEEEECCcCCCCE
Confidence 367777 5555568999999986533232 24555544311 111100 1122334578899999999
Q ss_pred EEEEeCc
Q 019979 115 YFYRCGR 121 (333)
Q Consensus 115 Y~Y~v~~ 121 (333)
|.|||..
T Consensus 89 Y~frV~A 95 (121)
T 1wf5_A 89 YQFRLCA 95 (121)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.044 Score=47.19 Aligned_cols=95 Identities=13% Similarity=0.146 Sum_probs=58.7
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCC-CCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDD-ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
....|..+.+...+.+++.|.|.-.. ....-.|+|+......... . . ........+.|++|+|++.|.+
T Consensus 14 ~p~~P~~l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~----~--~----~~~~~~~~~~i~~L~p~t~Y~~ 83 (283)
T 1tdq_A 14 VIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKT----T--F----RLQPPLSQYSVQALRPGSRYEV 83 (283)
T ss_dssp SSCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCE----E--E----EECTTCSEEEECSCCTTCEEEE
T ss_pred CCCCCcEEEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCCCcE----E--E----EeCCCCCEEEecCCCCCCEEEE
Confidence 34578999888788999999999874 2233467776543221110 0 0 0122344678999999999999
Q ss_pred EeCcC-------CCeeEEECCCC-CCCeeEEEEe
Q 019979 118 RCGRQ-------GPEFEFKTPPA-QFPITFAVAG 143 (333)
Q Consensus 118 ~v~~~-------s~~~~F~t~p~-~~~~~f~~~g 143 (333)
+|... .....|+|+|. ...+++...+
T Consensus 84 ~V~a~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~ 117 (283)
T 1tdq_A 84 SISAVRGTNESDASSTQFTTEIDAPKNLRVGSRT 117 (283)
T ss_dssp EEEEEETTEECCCEEEEEECCCCCCEEEEEEEEC
T ss_pred EEEEECCCCCCCCeeEEEECCCCCCCceEEEecC
Confidence 98641 23456777764 3334443333
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.013 Score=48.09 Aligned_cols=73 Identities=18% Similarity=0.207 Sum_probs=46.5
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
....|..+++...+.+++.++|...... ..-.|.|....+..... . . ...+....++|+||+|+|.|.+
T Consensus 103 ~~~~P~~l~v~~~t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~---~---~----~v~~~~t~~~l~gL~p~t~Y~~ 172 (195)
T 2qbw_A 103 VSSVPTNLEVVAATPTSLLISWDASYYGVSYYRITYGETGGNSPVQ---E---F----TVPYSSSTATISGLKPGVDYTI 172 (195)
T ss_dssp -CCSSCCCEEEEEETTEEEEECCCCCSSCSEEEEEEEETTCCSCCE---E---E----EEETTCSEEEECSCCTTCEEEE
T ss_pred cCCCCcccEEEeCCCCEEEEEEeCCCCCccEEEEEEEECCCCCcce---E---E----EeCCCCCEEEeCCCCCCCEEEE
Confidence 3456788888877899999999765322 23367776654321110 0 0 0112234688999999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
+|..
T Consensus 173 ~V~A 176 (195)
T 2qbw_A 173 TVYA 176 (195)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0036 Score=45.94 Aligned_cols=71 Identities=15% Similarity=0.178 Sum_probs=46.4
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+++.-.+.+++.|+|...... ..-.|+|....+..... . . ...+....++|+||+|+|.|.++|
T Consensus 9 ~~P~~l~v~~~t~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~---~----~v~~~~~~~~l~~L~p~t~Y~~~V 78 (105)
T 2ekj_A 9 SPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEK---S---V----SVPGARSHVTLPDLQAATKYRVLV 78 (105)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCSSCCSBBCBBCCCTTSCSCCC---C---B----CCBTTSSEEEECSCCSSCCCBCBB
T ss_pred CCCCceEEEeCCCCEEEEEEeCCCCcceEEEEEEEECCCCCccE---E---E----EeCCCcCEEEeCCCCCCCEEEEEE
Confidence 37889988877899999999887422 23356666543321100 0 0 012233467899999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 79 ~A 80 (105)
T 2ekj_A 79 SA 80 (105)
T ss_dssp CB
T ss_pred EE
Confidence 74
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.1 Score=44.85 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=48.4
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
...|..+.+...+.+++.|.|...... ..-.|+|....+.......-. ...+-.....|+||+|++.|.++
T Consensus 105 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~~ 176 (283)
T 1tdq_A 105 IDAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGVG 176 (283)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEEE
T ss_pred CCCCCceEEEecCCCeEEEEecCCCCCccEEEEEEEeCCCCcceEEECC--------CCCcccceEEEecCCCCCEEEEE
Confidence 456888888877899999999977422 344677776544222111000 01111567889999999999999
Q ss_pred eCc
Q 019979 119 CGR 121 (333)
Q Consensus 119 v~~ 121 (333)
|..
T Consensus 177 V~A 179 (283)
T 1tdq_A 177 ISA 179 (283)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=96.04 E-value=0.025 Score=46.46 Aligned_cols=84 Identities=17% Similarity=0.083 Sum_probs=50.4
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC-----CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDE-----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
..|..+.+...+. +++|+|..... ...-.|+|+...........-. ....+.....+|+||+|++.|
T Consensus 10 ~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~L~p~t~Y 81 (209)
T 2vkw_A 10 SSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD-------AKEASMEGIVTIVGLKPETTY 81 (209)
T ss_dssp CCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEE-------HHHHHHHSEEEECCCCTTCEE
T ss_pred cCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEee-------ccCCCccceEEeCCCCCCCeE
Confidence 3688888775555 69999997632 1223577776553322211100 000112335788999999999
Q ss_pred EEEeCc--------CCCeeEEECCC
Q 019979 116 FYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p 132 (333)
.|||.. .+....++|.+
T Consensus 82 ~~~V~A~n~~G~~~~s~~~~~~T~~ 106 (209)
T 2vkw_A 82 AVRLAALNGKGLGEISAASEFKTQP 106 (209)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEcCCcccCCcccccccccC
Confidence 999863 24556677754
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.034 Score=41.36 Aligned_cols=67 Identities=16% Similarity=0.278 Sum_probs=43.6
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+++.-.+ +++.|+|.-.... ..-.|+|..... ..... .........+|+||+|++.|.+
T Consensus 20 ~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~~-----------~~~~~~~~~~l~~L~p~t~Y~~ 86 (116)
T 2edb_A 20 QPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAETV-----------RVDSKQRYYSIERLESSSHYVI 86 (116)
T ss_dssp CCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEEE-----------EEETTCCEEEECSCCSSSBEEE
T ss_pred CCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEEE-----------EeCCCeeEEEeCCCCCCCEEEE
Confidence 78888888777 9999999876432 123567764221 11110 0112234678999999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
+|..
T Consensus 87 ~V~A 90 (116)
T 2edb_A 87 SLKA 90 (116)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.042 Score=44.95 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=47.0
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCC--C----CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDD--E----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~--~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
.+...|..+.+.....+++.|+|.... . ...-.|+|............. .........+|+||+|
T Consensus 103 ~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~p 173 (205)
T 1cfb_A 103 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN---------IFDWRQNNIVIADQPT 173 (205)
T ss_dssp CCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE---------ECCTTCCEEEECSCCS
T ss_pred CCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE---------ecCCCccEEEEcCCCC
Confidence 344567888777667899999998653 1 122367777655432111100 0111234678899999
Q ss_pred CCEEEEEeCc
Q 019979 112 DTVYFYRCGR 121 (333)
Q Consensus 112 ~t~Y~Y~v~~ 121 (333)
++.|.+||..
T Consensus 174 ~t~Y~~~V~A 183 (205)
T 1cfb_A 174 FVKYLIKVVA 183 (205)
T ss_dssp SCEEEEEEEE
T ss_pred CcEEEEEEEE
Confidence 9999999963
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=95.91 E-value=0.027 Score=48.77 Aligned_cols=79 Identities=23% Similarity=0.341 Sum_probs=49.7
Q ss_pred CCceEEEEecCCCcEEEEEEcC------CCCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITD------DESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~------~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
.|.++.+...+.+++.|+|... +....-.|+|....+.. ... . ........+|+||+||+.|
T Consensus 199 ~~p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~-~~~-----~------~~~~~~~~~~~~L~p~t~Y 266 (290)
T 3l5i_A 199 KGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE-TAV-----N------VDSSHTEYTLSSLTSDTLY 266 (290)
T ss_dssp SCCCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC-EEE-----E------EETTCSEEEECSCCTTCEE
T ss_pred CCCeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe-EEE-----E------eCCCceEEEeCCCCCCCEE
Confidence 3346666666789999999722 11223357777654321 110 0 1122335789999999999
Q ss_pred EEEeCc-------CCCeeEEECCC
Q 019979 116 FYRCGR-------QGPEFEFKTPP 132 (333)
Q Consensus 116 ~Y~v~~-------~s~~~~F~t~p 132 (333)
.++|.. .|+...|+|++
T Consensus 267 ~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 267 MVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEEEEEETTEEEECCCEEEECCC
T ss_pred EEEEEEEeCCCCCCCCceEeecCC
Confidence 999953 25678888865
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.021 Score=46.68 Aligned_cols=70 Identities=14% Similarity=0.140 Sum_probs=44.8
Q ss_pred CCceEEEEecC--CCcEEEEEEcCC--CCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAG--DSHMRVTWITDD--ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~--~~~~~v~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|.++.++-.. .+++.|.|.... ....-.|+|+.......... . ...+....+.|+||+|++.|.+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~------~----~~~~~~~~~~i~~L~p~t~Y~~ 71 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE------A----TIPGHLNSYTIKGLKPGVVYEG 71 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEE------E----EECTTCCEEEECSCCTTEEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEE------E----ecCCCccEEEecCCCCCCEEEE
Confidence 57777777655 899999999863 12334677876543211110 0 0112233678999999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
+|..
T Consensus 72 ~V~a 75 (201)
T 2ha1_A 72 QLIS 75 (201)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.90 E-value=0.04 Score=40.92 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=44.7
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+.+.....+++.|.|....... .-.|+|........... . ........++|++|+|++.|.
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--~--------~~~~~~~~~~i~~L~p~t~Y~ 88 (119)
T 1wfn_A 19 GPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVT--H--------YLPNVTLEYRVTGLTALTTYT 88 (119)
T ss_dssp CCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCC--E--------EECSSCCEEEEESCCTTCEEE
T ss_pred CCCCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEE--E--------EeCCCceEEEEcCCCCCCEEE
Confidence 357778777667899999998664322 23566655432111000 0 112334467889999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
+||..
T Consensus 89 ~~V~A 93 (119)
T 1wfn_A 89 IEVAA 93 (119)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.05 Score=44.71 Aligned_cols=87 Identities=22% Similarity=0.313 Sum_probs=52.1
Q ss_pred CCCCCCceEEEEecC--CCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 38 KPSSHPQQVHISLAG--DSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~--~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
.++..|..+.+...+ .+++.|+|....... .-.|+|............-. ...+....++|+||+|
T Consensus 104 ~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p 175 (211)
T 3p4l_A 104 VPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE--------PVVGNRLTHQIQELTL 175 (211)
T ss_dssp CCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEE--------EEESSCSEEEECCCCT
T ss_pred CCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEE--------EecCCeeEEEEcCCCC
Confidence 344578888887664 789999999754322 23566765543221100000 0112234678999999
Q ss_pred CCEEEEEeCc--------CCCeeEEECCC
Q 019979 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p 132 (333)
++.|.++|.. .|+...|+|..
T Consensus 176 ~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 176 DTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp TCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred CCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 9999999863 24556666644
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=95.81 E-value=0.054 Score=44.44 Aligned_cols=71 Identities=14% Similarity=0.172 Sum_probs=45.0
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
...|..+.+...+.+++.|+|...... ..-.|+|....+...... .........+|+||+|++.|
T Consensus 110 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y 178 (209)
T 2vkw_A 110 PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI-----------RLPSGSDHVMLKSLDWNAEY 178 (209)
T ss_dssp CCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCE-----------EECTTCCEEEECSCCTTCEE
T ss_pred CCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEECCCCCCceee-----------ecCCCccEEEecCCCCCCEE
Confidence 446777776666799999999986322 233677776222111110 01122335679999999999
Q ss_pred EEEeCc
Q 019979 116 FYRCGR 121 (333)
Q Consensus 116 ~Y~v~~ 121 (333)
.|||..
T Consensus 179 ~~~V~A 184 (209)
T 2vkw_A 179 EVYVVA 184 (209)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.099 Score=45.19 Aligned_cols=89 Identities=16% Similarity=0.143 Sum_probs=55.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+.+...+.+++.|.|..... ...-.|+|....+...... ..........|+||+|++.|.++|
T Consensus 114 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~~V 182 (290)
T 3r8q_A 114 SPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQR-----------TIKPDVRSYTITGLQPGTDYKIYL 182 (290)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCCCEEEEEEEESSSCCCEEE-----------EECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCceeEEEEcCCCeEEEEEeCCCCcccEEEEEEEECCCCcceEE-----------ecCCCccEEEECCCCCCCEEEEEE
Confidence 5788888887789999999998643 2334677766543221110 011223357899999999999998
Q ss_pred CcC-----C--CeeEEECCCC-CCCeeEE
Q 019979 120 GRQ-----G--PEFEFKTPPA-QFPITFA 140 (333)
Q Consensus 120 ~~~-----s--~~~~F~t~p~-~~~~~f~ 140 (333)
... + ....++|.|. ...+++.
T Consensus 183 ~A~n~~g~s~~~~~~~~t~p~~P~~l~~~ 211 (290)
T 3r8q_A 183 YTLNDNARSSPVVIDASTAIDAPSNLRFL 211 (290)
T ss_dssp EEEETTEECCCEEEEEECCCCCCEEEEEE
T ss_pred EEEeCCcccCCEEEEecCCCCCCCccEEE
Confidence 631 2 2345566653 2334443
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.75 E-value=0.052 Score=44.54 Aligned_cols=70 Identities=13% Similarity=0.121 Sum_probs=45.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
.|..+.+...+.+++.|+|...... ..-.|+|...++....... .........+|+||+|++.|.++|
T Consensus 25 ~P~~l~~~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 94 (203)
T 2gee_A 25 QPTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED----------FVDSSVGYYTVTGLEPGIDYDISV 94 (203)
T ss_dssp CCEEEEEECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE----------EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCccEEEecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE----------EcCCCccEEEeCCCCCCCEEEEEE
Confidence 5888888877799999999976421 2346777765433211110 011223357889999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 95 ~a 96 (203)
T 2gee_A 95 YT 96 (203)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=95.73 E-value=0.024 Score=46.81 Aligned_cols=74 Identities=16% Similarity=0.194 Sum_probs=45.2
Q ss_pred CCCCceEEEEec--CCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCC
Q 019979 40 SSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (333)
Q Consensus 40 ~~~p~~v~l~~~--~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 113 (333)
...|..+.+... +.+++.|.|....... .-.|+|....+......... .........+|++|+|+|
T Consensus 104 p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t 175 (215)
T 1bqu_A 104 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 175 (215)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSE
T ss_pred CCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc--------cccCccceEEeCCCCCCC
Confidence 347888877754 5789999998654322 23666766543222111000 002223467899999999
Q ss_pred EEEEEeCc
Q 019979 114 VYFYRCGR 121 (333)
Q Consensus 114 ~Y~Y~v~~ 121 (333)
.|.+||..
T Consensus 176 ~Y~~~V~A 183 (215)
T 1bqu_A 176 EYVFRIRC 183 (215)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999863
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.068 Score=44.39 Aligned_cols=67 Identities=13% Similarity=0.225 Sum_probs=43.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCC-CeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGY-NCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..++.+-.+++++.++|..... ..+.-.|..--+.. -..+.+. . -.-+++||+|+|.|.|||
T Consensus 152 ~Pp~NL~At~VT~tSVtLsW~aP~~-~~GI~gY~ly~~g~~v~~v~~~-----------~--tsyt~~gLk~~TeYsF~V 217 (238)
T 2w1n_A 152 NPVRDFKASEINKKNVTVTWTEPET-TEGLEGYILYKDGKKVAEIGKD-----------E--TSYTFKKLNRHTIYNFKI 217 (238)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSC-CTTEEEEEEEETTEEEEEEETT-----------C--CEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEEccCCeEEEEecCCCC-CCCceeEEEEeCCceeEEeecc-----------c--eEEEecCCCCCCEEEEEE
Confidence 6788898888899999999998854 32344444322210 0111111 1 124578999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 218 ~A 219 (238)
T 2w1n_A 218 AA 219 (238)
T ss_dssp EE
T ss_pred EE
Confidence 63
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.061 Score=43.25 Aligned_cols=70 Identities=14% Similarity=0.226 Sum_probs=45.7
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
...|..+.+...+.+++.|+|....... .-.|+|....+....... . . .....+|++|+|++.
T Consensus 103 p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~--~~~~~~~~~L~p~t~ 170 (197)
T 3lpw_A 103 PLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCA-T---------V--KVTEATITGLIQGEE 170 (197)
T ss_dssp CCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEE-E---------E--SSSEEEECCCCTTCE
T ss_pred CCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEee-c---------c--cccEEEeCCcCCCCE
Confidence 3478888888777999999999754322 236667665433221111 0 1 122467899999999
Q ss_pred EEEEeCc
Q 019979 115 YFYRCGR 121 (333)
Q Consensus 115 Y~Y~v~~ 121 (333)
|.|+|..
T Consensus 171 Y~~~V~A 177 (197)
T 3lpw_A 171 YSFRVSA 177 (197)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=95.67 E-value=0.07 Score=44.02 Aligned_cols=83 Identities=11% Similarity=0.120 Sum_probs=51.0
Q ss_pred CCCCceEEEEec------CCCcEEEEEEcCCCCC----CcEEEEe-ccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCC
Q 019979 40 SSHPQQVHISLA------GDSHMRVTWITDDESS----PSVVEYG-TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (333)
Q Consensus 40 ~~~p~~v~l~~~------~~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 108 (333)
...|..+.+... ..+++.|.|......+ .-.|+|+ ...+.....+.. ..+......|.+
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~ 178 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFH----------LPSSKDQFELCG 178 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEE----------EESCEEEEEECC
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEec----------ccCcceEEEEcC
Confidence 456777776654 4788999998764221 2357777 444332222110 112235678999
Q ss_pred CCCCCEEEEEeCc-----------CCCeeEEECCC
Q 019979 109 LEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (333)
Q Consensus 109 L~p~t~Y~Y~v~~-----------~s~~~~F~t~p 132 (333)
|+|+|.|.+||.. +|+...|+|+.
T Consensus 179 L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 179 LHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 9999999999853 24556777754
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.063 Score=43.87 Aligned_cols=70 Identities=13% Similarity=0.175 Sum_probs=43.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCe-eEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNC-GAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
..|..+.+.. +.+++.|+|.-..... .-.|+|+........ ..... ..+......+ +|+|++.|
T Consensus 7 ~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---------~~~~~~~~~~-~L~p~t~Y 75 (205)
T 1cfb_A 7 NAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK---------VPNTDSSFVV-QMSPWANY 75 (205)
T ss_dssp CCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE---------EETTCSEEEE-ECCSSEEE
T ss_pred CCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeec---------cCCCceEEEE-eCCCCCEE
Confidence 3788998888 9999999999763222 236777654322111 11111 1111123345 99999999
Q ss_pred EEEeCc
Q 019979 116 FYRCGR 121 (333)
Q Consensus 116 ~Y~v~~ 121 (333)
.|||..
T Consensus 76 ~~~V~A 81 (205)
T 1cfb_A 76 TFRVIA 81 (205)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999863
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=95.61 E-value=0.036 Score=48.51 Aligned_cols=86 Identities=16% Similarity=0.128 Sum_probs=53.0
Q ss_pred CCCCCceEEEEec--CCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 39 PSSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 39 ~~~~p~~v~l~~~--~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
....|..+.+... +.+++.|+|....... .-.|+|+.........+... .........+|++|+|+
T Consensus 199 ~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~--------~~~~~~~~~~l~~L~p~ 270 (303)
T 1i1r_A 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPF 270 (303)
T ss_dssp ECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCTT
T ss_pred ecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc--------cCCCceeEEEeCCCCCC
Confidence 3457888877654 4789999999764321 23677776653222111100 00122346789999999
Q ss_pred CEEEEEeCc-----------CCCeeEEECCC
Q 019979 113 TVYFYRCGR-----------QGPEFEFKTPP 132 (333)
Q Consensus 113 t~Y~Y~v~~-----------~s~~~~F~t~p 132 (333)
|.|.+||.. +|+...|+|+.
T Consensus 271 t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 271 TEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp CEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred CEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 999999863 24567788864
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=95.59 E-value=0.0073 Score=43.71 Aligned_cols=63 Identities=19% Similarity=0.168 Sum_probs=40.2
Q ss_pred EecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCc
Q 019979 49 SLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (333)
Q Consensus 49 ~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 121 (333)
+-.++++++|+|...... ..-.|+|....+..... + . ..++....+.|+||+|||.|...|..
T Consensus 15 t~vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~---~---~----~v~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 15 TEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ---Y---L----DLPSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp CCCGGGCEEEECCCSCTTEEEEEEEEEETTTCCCCE---E---E----EEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEeCCCeEEEEECCCCCCccEEEEEEEeCCCCCcce---E---E----ECCCCccEEEECCCCCCCEEEEEEEE
Confidence 434578999999876432 44577787765421110 0 0 12234457889999999999988753
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=95.55 E-value=0.045 Score=49.28 Aligned_cols=73 Identities=14% Similarity=0.145 Sum_probs=48.3
Q ss_pred CCCCceEEEEecCCC-cEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 40 SSHPQQVHISLAGDS-HMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~-~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
...|..+.+...+.+ ++.|+|..... ...-.|+|....+......... .......+.|++|+|++.|.
T Consensus 3 ~~~P~~l~~~~~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 73 (375)
T 3t1w_A 3 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEYN 73 (375)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEEE---------EETTCCEEEECCCCTTCCEE
T ss_pred CCCCCccEEEecCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeEE---------cCCCccEEEEcCCcCCCEEE
Confidence 457889988877788 99999997642 2334677877554221111100 11223467889999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
|+|..
T Consensus 74 ~~V~a 78 (375)
T 3t1w_A 74 VSVYT 78 (375)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=95.54 E-value=0.12 Score=42.48 Aligned_cols=82 Identities=10% Similarity=0.094 Sum_probs=52.4
Q ss_pred CCCCCceEEEEecC----CCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEe
Q 019979 39 PSSHPQQVHISLAG----DSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVI 106 (333)
Q Consensus 39 ~~~~p~~v~l~~~~----~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 106 (333)
....|..+.+.... .+++.|+|....... .-.|+|+...+....... ........|
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~~------------~~~~~~~~l 169 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKI 169 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEEE------------EETCSEEEE
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEEe------------ccCceEEEE
Confidence 34578888887643 589999999764322 125667665432221110 011235678
Q ss_pred CCCCCCCEEEEEeCc---------CCCeeEEECCC
Q 019979 107 GPLEHDTVYFYRCGR---------QGPEFEFKTPP 132 (333)
Q Consensus 107 ~~L~p~t~Y~Y~v~~---------~s~~~~F~t~p 132 (333)
.+|+|++.|.+||.. +|+...|+|+.
T Consensus 170 ~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 170 LSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp CCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred eccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 999999999999853 35678899865
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.43 E-value=0.071 Score=46.13 Aligned_cols=83 Identities=10% Similarity=0.013 Sum_probs=53.6
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
...|..+.+...+.+++.|+|...... ..-.|+|............ ........+.|++|+|++.|.|+
T Consensus 21 p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~ 90 (290)
T 3r8q_A 21 IPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----------NLAPDSSSVVVSGLMVATKYEVS 90 (290)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE----------EECTTCCEEEECSCCSSCEEEEE
T ss_pred CCCCCceEEEECCCCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE----------EcCCCccEEEeCCCCCCCEEEEE
Confidence 347889988888899999999987422 3346777765432111100 01223446789999999999999
Q ss_pred eCcC-----C--CeeEEECCC
Q 019979 119 CGRQ-----G--PEFEFKTPP 132 (333)
Q Consensus 119 v~~~-----s--~~~~F~t~p 132 (333)
|... + ....++|.+
T Consensus 91 V~a~~~~g~s~~s~~~~~t~~ 111 (290)
T 3r8q_A 91 VYALKDTLTSRPAQGVVTTLE 111 (290)
T ss_dssp EEEEETTEECCCEEEEEECCC
T ss_pred EEEEeCCCCCCCcceeEecCC
Confidence 8641 1 234577754
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=95.42 E-value=0.064 Score=44.04 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=44.0
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeEEEEeeee--eecCeEEEEEeCCCCCCCEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLF--YRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~L~p~t~Y 115 (333)
.|..+.+...+.+++.|+|.-...... -.|+|...+.............+.... .........+|++|+|++.|
T Consensus 4 pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 83 (214)
T 2ibg_A 4 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTY 83 (214)
T ss_dssp CCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEE
T ss_pred CCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEE
Confidence 456666665678999999987543222 256666543211111111100000000 01123456789999999999
Q ss_pred EEEeCc
Q 019979 116 FYRCGR 121 (333)
Q Consensus 116 ~Y~v~~ 121 (333)
.|||..
T Consensus 84 ~~~V~A 89 (214)
T 2ibg_A 84 RFRILA 89 (214)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999863
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.42 E-value=0.048 Score=44.73 Aligned_cols=70 Identities=21% Similarity=0.271 Sum_probs=46.5
Q ss_pred CCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
.|..+.+...+.+++.|+|..... ...-.|+|....+..... . . ...+....++|+||+|++.|.++|
T Consensus 116 ~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~---~-~------~~~~~~~~~~i~~L~p~t~Y~~~V 185 (203)
T 2gee_A 116 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVA---E-L------SISPSDNAVVLTNLLPGTEYVVSV 185 (203)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGCE---E-E------EECTTCCEEEECSCCTTCEEEEEE
T ss_pred CCCceEEEEcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCccE---E-E------EcCCCcCEEEECCCCCCCEEEEEE
Confidence 688888777779999999998742 133467777644321111 0 0 112334567899999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 186 ~A 187 (203)
T 2gee_A 186 SS 187 (203)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.042 Score=41.55 Aligned_cols=68 Identities=15% Similarity=0.237 Sum_probs=43.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+++.-.. +++.|+|.-..... .-.|+|.... . ... . . .........+|++|+|++.|.
T Consensus 29 ~~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~-~-~~~------~-~---~~~~~~~~~~i~~L~p~t~Y~ 95 (126)
T 1x5i_A 29 EVPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGIGS-P-HAQ------T-I---KVDYKQRYYTIENLDPSSHYV 95 (126)
T ss_dssp CSCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECSSC-G-GGE------E-E---ECCTTCCEEEECSCCSSCEEC
T ss_pred CCCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEcCC-C-Cce------E-E---EeCCCeeEEEEeCCCCCCEEE
Confidence 478888888765 99999999764322 2356665311 1 100 0 0 122334567899999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
++|..
T Consensus 96 ~~V~A 100 (126)
T 1x5i_A 96 ITLKA 100 (126)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 99863
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=0.085 Score=50.51 Aligned_cols=81 Identities=17% Similarity=0.278 Sum_probs=50.4
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+.+...+.++++|+|....... .-.|+|....+...... .......++|+||+|+|.|.
T Consensus 442 ~~Ps~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~------------v~~~~ts~~l~gL~P~T~Y~ 509 (536)
T 3fl7_A 442 TEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNV------------RRTEGFSVTLDDLAPDTTYL 509 (536)
T ss_dssp CCCCEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCEE------------EEESSSEEECCSCCSSCEEE
T ss_pred cCCCCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEEE------------EcCCCCEEEECCCCCCCEEE
Confidence 357777776566899999999653322 23677776544311110 01112357799999999999
Q ss_pred EEeCc--------CCCeeEEECCCC
Q 019979 117 YRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p~ 133 (333)
++|.. .|+...|+|++.
T Consensus 510 frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 510 VQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EEEEEECC---CEECCCEEEECCC-
T ss_pred EEEEEEcCCcccCCCCCEEEEeCCC
Confidence 99963 266788998764
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=95.03 E-value=0.083 Score=47.30 Aligned_cols=72 Identities=14% Similarity=0.157 Sum_probs=46.6
Q ss_pred CCCceEEEEecCCC-cEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 41 SHPQQVHISLAGDS-HMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 41 ~~p~~v~l~~~~~~-~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
..|..+.+...+.+ ++.|.|..... ...-.|+|....+......... ..+....++|++|+|++.|.|
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~~ 73 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEYNV 73 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEE---------ECTTCCEEECCCCCTTSCEEE
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEEE---------ecCCcCEEEECCCCCCCEEEE
Confidence 47888988866655 69999998642 2334777776554221111100 122334678999999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
+|..
T Consensus 74 ~V~a 77 (368)
T 1fnf_A 74 SVYT 77 (368)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=94.75 E-value=0.037 Score=51.87 Aligned_cols=71 Identities=17% Similarity=0.206 Sum_probs=47.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
..|..+++.-.+.+|++++|..... ...-.|+|......... . +.. ..+-..+++|+||+|||.|..+
T Consensus 371 ~~~~~l~~~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~----~---~~~---~~~~~~~~~i~~L~p~t~Y~~~ 440 (461)
T 3csg_A 371 SVPTNLEVVAATPTSLLISWDASYSSSVSYYRITYGETGGNSPV----Q---EFT---VPGSKSTATISGLSPGVDYTIT 440 (461)
T ss_dssp CSSCCCEEEEECSSCEEEECCCTTGGGCSEEEEEEEETTCCSCC----E---EEE---EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCcceEEeccCCCeEEEEecCCCCCcceEEEEEEEECCCCccc----e---EEE---ecCCCceEEecCCCCCCEEEEE
Confidence 4688888998889999999987521 12346777766422100 0 011 1122357899999999999999
Q ss_pred eCc
Q 019979 119 CGR 121 (333)
Q Consensus 119 v~~ 121 (333)
|..
T Consensus 441 v~a 443 (461)
T 3csg_A 441 VYA 443 (461)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.68 E-value=0.13 Score=36.37 Aligned_cols=79 Identities=18% Similarity=0.222 Sum_probs=50.7
Q ss_pred CCceEEEEecC--CCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAG--DSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~--~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|-|+.++-.. .++-.|.|...... ..-.+.|+......... .. .-++....-+|+||+||..|.=
T Consensus 7 gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wk------e~----~Ip~h~nSYtI~GL~P~~~YE~ 76 (98)
T 1oww_A 7 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWK------EA----TIPGHLNSYTIKGLKPGVVYEG 76 (98)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCE------EE----EECSSCCEEEECSCCSSEEEEE
T ss_pred cceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCcee------EE----EecCccceEEEecCCCCcEEEE
Confidence 46677665444 78899999998643 34466677665421111 11 1334666678999999999999
Q ss_pred EeCc-----CC--CeeEEEC
Q 019979 118 RCGR-----QG--PEFEFKT 130 (333)
Q Consensus 118 ~v~~-----~s--~~~~F~t 130 (333)
+|.+ ++ ..+.|+|
T Consensus 77 qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 77 QLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEEEESSSCEEEEEEEEEE
T ss_pred EEEEeeccCcccceEEEEEe
Confidence 8754 22 2677766
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.67 E-value=0.15 Score=44.76 Aligned_cols=83 Identities=10% Similarity=0.034 Sum_probs=50.8
Q ss_pred CCCCceEEEEec------CCCcEEEEEEcCCCCC----CcEEEEe-ccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCC
Q 019979 40 SSHPQQVHISLA------GDSHMRVTWITDDESS----PSVVEYG-TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (333)
Q Consensus 40 ~~~p~~v~l~~~------~~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 108 (333)
...|..+.+... ..+++.|+|......+ .-.|+|+ ..++..+..+. . .........|.+
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~-~---------~~~~~~~~~l~~ 272 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVG-P---------LPLEALQYELCG 272 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEE-E---------ECSCEEEEEECS
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcc-c---------ccCcceEEEEeC
Confidence 346777765543 3589999999753211 2367777 44332222211 0 122346788999
Q ss_pred CCCCCEEEEEeCc-----------CCCeeEEECCC
Q 019979 109 LEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (333)
Q Consensus 109 L~p~t~Y~Y~v~~-----------~s~~~~F~t~p 132 (333)
|+|+|.|.+||.. +|+...++|+.
T Consensus 273 L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~ 307 (313)
T 2d9q_B 273 LLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 307 (313)
T ss_dssp CCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCeEEEEEEeeECCCCCccCCCCCccceeCCc
Confidence 9999999999863 24556777764
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=94.52 E-value=0.23 Score=41.77 Aligned_cols=85 Identities=15% Similarity=0.180 Sum_probs=53.1
Q ss_pred CCCCCceEEEEecC-CCcEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 39 PSSHPQQVHISLAG-DSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 39 ~~~~p~~v~l~~~~-~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
....|..+.+.... ..++.|+|....... .-.|+|+........... . .......+.+.+|+|
T Consensus 112 KPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v-~---------~~~t~~~i~l~~L~P 181 (223)
T 3up1_A 112 KPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHV-N---------LSSTKLTLLQRKLQP 181 (223)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEE-E---------ESSSEEEEEGGGSCT
T ss_pred EcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEE-E---------ecCceeEEeccccCC
Confidence 34478888888765 678999999874221 235777765321111111 0 112233456789999
Q ss_pred CCEEEEEeCc------------CCCeeEEECCCC
Q 019979 112 DTVYFYRCGR------------QGPEFEFKTPPA 133 (333)
Q Consensus 112 ~t~Y~Y~v~~------------~s~~~~F~t~p~ 133 (333)
|+.|..||.. +|+...|+|++.
T Consensus 182 gt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 182 AAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp TCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred CcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 9999999852 255678888763
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=94.40 E-value=0.33 Score=40.53 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=46.2
Q ss_pred CCCCCceEEEEecC-CCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 39 PSSHPQQVHISLAG-DSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 39 ~~~~p~~v~l~~~~-~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
....|..|++...+ .+++.|+|....... .-.|+|....+....... . .......+.|.+|+||
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~-~---------~~~~~~~~~l~~L~p~ 190 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV-E---------ILEGRTECVLSNLRGR 190 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE-E---------ECTTCCEEEECCCCSS
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE-E---------EecCceEEEEcccCCC
Confidence 34578889888765 789999998774321 236677755432221100 0 0111336788999999
Q ss_pred CEEEEEeC
Q 019979 113 TVYFYRCG 120 (333)
Q Consensus 113 t~Y~Y~v~ 120 (333)
+.|..||.
T Consensus 191 t~Y~vqVR 198 (227)
T 1eer_B 191 TRYTFAVR 198 (227)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEE
Confidence 99999986
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.33 E-value=0.1 Score=38.83 Aligned_cols=81 Identities=16% Similarity=0.162 Sum_probs=47.7
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCC--CCCC----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDD--ESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~--~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
.++..|..|.+.. ..+++.|+|.-.. .... -.|.|+........... ... ..+.+. |+|
T Consensus 17 ~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~-----------~~~--~~~~~~-L~~ 81 (117)
T 1wj3_A 17 PPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN-----------TNK--TSAELV-LPI 81 (117)
T ss_dssp CCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE-----------ESS--SEEEEE-CCC
T ss_pred CCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEEe-----------CCC--cEEEEE-CCC
Confidence 3445566666554 6788999998662 1221 24556655432211100 111 245666 999
Q ss_pred CCEEEEEeCc--------CCCeeEEECCCC
Q 019979 112 DTVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
++.|.+||.. .|+...|+|...
T Consensus 82 ~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 82 KEDYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp SSCEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred CCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 9999999863 255677888653
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=94.21 E-value=0.23 Score=47.96 Aligned_cols=68 Identities=21% Similarity=0.180 Sum_probs=47.2
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
.|....++-.+.++++++|...... ..-.||+...++..+..+. .. . .. ..+++||.||+.|.
T Consensus 12 pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~--------~-~t--~~~V~~L~~g~~Y~ 79 (573)
T 3uto_A 12 PPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS--------R-YT--YTTIEGLRAGKQYE 79 (573)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE--------S-SS--EEEECCCCTTCEEE
T ss_pred cCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc--------c-CC--EEEeCCCCCCCcEe
Confidence 5777778878899999999975322 2236788877766554432 21 1 11 35789999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
|||..
T Consensus 80 FRV~A 84 (573)
T 3uto_A 80 FRIIA 84 (573)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99963
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=94.13 E-value=0.22 Score=44.71 Aligned_cols=71 Identities=11% Similarity=0.063 Sum_probs=46.1
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+.+...+.+++.|+|..... ...-.|+|....+...... . .........+|+||+||+.|.|+|
T Consensus 279 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~--~--------~~~~~~~~~~i~~L~p~t~Y~~~V 348 (375)
T 3t1w_A 279 DSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE--D--------RVPHSRNSITLTNLTPGTEYVVSI 348 (375)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEE--E--------EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCccEeeeccCCEEEEEECCCCcceeeEEEEEEECCCCCccee--E--------EcCCCccEEEECCCCCCCEEEEEE
Confidence 4678887776678999999998533 2334677776653111110 0 011223357899999999999999
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 349 ~A 350 (375)
T 3t1w_A 349 VA 350 (375)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=94.08 E-value=0.093 Score=43.95 Aligned_cols=76 Identities=17% Similarity=0.239 Sum_probs=46.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+.+...+.+++.|.|.-..... .-.|+|....+..... +...... .........+|+||+|++.|.
T Consensus 100 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~ 174 (234)
T 3f7q_A 100 SEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVL---VDNPKNRMLLIENLRESQPYR 174 (234)
T ss_dssp CCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECC---CSCTTCCEEEEECCCTTCCEE
T ss_pred CCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEE---ecCCcceEEEeCCCCCCCeEE
Confidence 357888888778999999998653321 2366776654332110 0000000 112223467899999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
++|..
T Consensus 175 ~~V~A 179 (234)
T 3f7q_A 175 YTVKA 179 (234)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99963
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=94.07 E-value=0.35 Score=43.33 Aligned_cols=82 Identities=17% Similarity=0.295 Sum_probs=46.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|. +.....+.+++.|+|.-..... .-.|+|............ ...+.....+|++|+|++.|.
T Consensus 295 ~~p~-~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~~~t~Y~ 363 (389)
T 2jll_A 295 SPPS-IHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEK----------KVQGNKDHIILEHLQWTMGYE 363 (389)
T ss_dssp CCCC-EEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBCC----------EECTTCCEEEECSCCTTCEEE
T ss_pred CCCc-cccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeEe----------eccCCcceEEeCCcCCCCEEE
Confidence 3443 5555567999999998643222 235667653321111000 112233457889999999999
Q ss_pred EEeCcC-------CCeeEEECCCC
Q 019979 117 YRCGRQ-------GPEFEFKTPPA 133 (333)
Q Consensus 117 Y~v~~~-------s~~~~F~t~p~ 133 (333)
|||... .....|+|++.
T Consensus 364 ~~V~A~n~~G~s~~s~~~~~T~~~ 387 (389)
T 2jll_A 364 VQITAANRLGYSEPTVYEFSMPPK 387 (389)
T ss_dssp EEEEEEC-CCBCCCEEEEEECCCC
T ss_pred EEEEEEcCCcCCCceeeEecCCCC
Confidence 998631 12357888763
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=93.77 E-value=0.51 Score=42.00 Aligned_cols=71 Identities=11% Similarity=0.079 Sum_probs=45.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+.+...+.+++.|.|...... ..-.|+|........... . .........+|+||+|++.|.|+|
T Consensus 187 ~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~--~--------~~~~~~~~~~i~~L~p~t~Y~~~V 256 (368)
T 1fnf_A 187 DSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE--D--------RVPHSRNSITLTNLTPGTEYVVSI 256 (368)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEE--E--------EEETTCCEEEEESCCTTCEEEEEE
T ss_pred CCCCccEEEEccCCEEEEEEeCCCCCcCEEEEEEecCCCCCCccE--E--------EeCCCcCEEEECCCCCCCEEEEEE
Confidence 46778877766789999999876432 234677766543211110 0 011223356788999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 257 ~A 258 (368)
T 1fnf_A 257 VA 258 (368)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=93.66 E-value=0.13 Score=48.73 Aligned_cols=87 Identities=11% Similarity=0.148 Sum_probs=54.0
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
....|..+.+.....+++.|+|........ -.|+|+......... . . . .. ......+.+.|.+|+|+|.
T Consensus 386 ~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~-~-~--~--~~-~~~~~~~~v~l~~L~P~T~ 458 (488)
T 2q7n_A 386 APHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVR-N-A--T--IR-GAEDSTYHVAVDKLNPYTA 458 (488)
T ss_dssp CCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEE-E-E--E--EE-CCEEEEEEEEECSCCSSCC
T ss_pred CCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceE-E-E--E--Ee-cCCCcEEEEEeCCCCCCce
Confidence 345788888876678999999997743222 246676654321110 0 0 0 00 0112356679999999999
Q ss_pred EEEEeCc----------CCCeeEEECCC
Q 019979 115 YFYRCGR----------QGPEFEFKTPP 132 (333)
Q Consensus 115 Y~Y~v~~----------~s~~~~F~t~p 132 (333)
|.+||.. +|+...|+|++
T Consensus 459 Y~~rVRA~~~g~G~WS~WS~~v~~~T~e 486 (488)
T 2q7n_A 459 YTFRVRCSSKTFWKWSRWSDEKRHLTTE 486 (488)
T ss_dssp BBCCEEEEESSCSSCCCCCCCCCBCCCC
T ss_pred EEEEEEEEECCCCCCCCCcCCEeEECCC
Confidence 9999852 24556777765
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.99 E-value=0.34 Score=39.53 Aligned_cols=84 Identities=17% Similarity=0.113 Sum_probs=48.4
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-CCc----EEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-SPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
.|..+.+. ...+++++.|...... ..+ .|+|...+...+....-. . .........+|.+|+|++.|.
T Consensus 116 ~p~~~~~~-~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~-----~--~~~~~~~~l~i~~L~~~~~y~ 187 (215)
T 3mtr_A 116 SPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD-----A--KEASMEGIVTIVGLKPETTYA 187 (215)
T ss_dssp CCEEEEEE-EETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEE-----H--HHHHHHTEEEEECCCTTCEEE
T ss_pred CCcceEEE-EecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccc-----c--ccccccccEEECCCCCCCEEE
Confidence 45555443 3477899999854321 222 466766554322221100 0 010111456789999999999
Q ss_pred EEeCc--------CCCeeEEECCCC
Q 019979 117 YRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p~ 133 (333)
|||.. .|....|+|+|.
T Consensus 188 ~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 188 VRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp EEEEEEESSCBCCCCCCEEEECCC-
T ss_pred EEEEEEeCCcccCcccceeeEeccc
Confidence 99853 256778999874
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.88 E-value=0.097 Score=42.59 Aligned_cols=67 Identities=18% Similarity=0.158 Sum_probs=39.7
Q ss_pred eEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCc
Q 019979 45 QVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (333)
Q Consensus 45 ~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 121 (333)
.+.+...+.+++.|+|...... ..-.|+|.......... . . ...+....+.|+||+||+.|.++|..
T Consensus 117 ~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~-~---~------~v~~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 117 SESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ-Y---L------DLPSTATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp CSSCCCCCSCCEEEECCCSCTTEEEEEEEEEETTTCCCCE-E---E------EEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred ceEEEecCCCeEEEEEeCCCCCccEEEEEEEECCCCCcee-E---E------EcCCceeEEEeCCCCCCCEEEEEEEE
Confidence 3344545588999999766322 22356676542211110 0 0 01223446789999999999999864
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.81 E-value=0.23 Score=40.83 Aligned_cols=75 Identities=12% Similarity=0.105 Sum_probs=41.9
Q ss_pred CCCCCCceEEEEec-CCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCC
Q 019979 38 KPSSHPQQVHISLA-GDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (333)
Q Consensus 38 ~~~~~p~~v~l~~~-~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 113 (333)
.....|..+.+... ..+++.|.|....... .-.|+|.............. .......+.|.+|+|||
T Consensus 108 vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~---------~~~~~~~~~l~~L~p~t 178 (206)
T 3v6o_A 108 VKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEV---------YDAKSKSVSLPVPDLCA 178 (206)
T ss_dssp BCCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEEEE---------CC---CEEEECCSCTTS
T ss_pred EcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEec---------ccCcceeEEeecCCCCC
Confidence 34457877877765 4889999998764322 23566776542111111100 11112357899999999
Q ss_pred EEEEEeCc
Q 019979 114 VYFYRCGR 121 (333)
Q Consensus 114 ~Y~Y~v~~ 121 (333)
.|.+||..
T Consensus 179 ~Y~vqVRa 186 (206)
T 3v6o_A 179 VYAVQVRC 186 (206)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=92.16 E-value=0.67 Score=39.71 Aligned_cols=73 Identities=14% Similarity=0.202 Sum_probs=43.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+.+... .+++.|+|.-... ...-.|+|............ +.. ..........+++|+|++.|.++|
T Consensus 103 ~p~~~~~~~~~-~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~L~p~t~Y~~~V 174 (290)
T 3l5i_A 103 HPVMDLKAFPK-DNMLWVEWTTPRESVKKYILEWCVLSDKAPCITD-----WQQ--EDGTVHRTYLRGNLAESKCYLITV 174 (290)
T ss_dssp CCCEEEEEEEE-TTEEEEEEECCSSCCCEEEEEEEEECSSSCCCCE-----EEE--EETTCSEEECCSCCCTTCEEEEEE
T ss_pred CccceeEEEeC-CCeEEEEEeCCCCCCCcEEEEEEECCCCCCCCcC-----eEE--ccCCCcceEEecCcCCccEEEEEE
Confidence 34555555543 4799999987743 23446777765543111000 000 122334556789999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 175 ~A 176 (290)
T 3l5i_A 175 TP 176 (290)
T ss_dssp EE
T ss_pred EE
Confidence 63
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.90 E-value=0.15 Score=48.13 Aligned_cols=87 Identities=10% Similarity=0.058 Sum_probs=54.0
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
.+..|..+.+.....+++.|+|...... -.-.|+|.......... ..... ......+.+.|.+|+|||.
T Consensus 381 kP~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~------~vsv~-~~~~~~~s~~l~~L~PgT~ 453 (483)
T 3e0g_A 381 YPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR------NVTIQ-GVENSSYLVALDKLNPYTL 453 (483)
T ss_dssp CCCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE------ECCCB-CCSSSBCCCCCCSCCSSSS
T ss_pred CCCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE------EEEEe-ccCCceeEEEEeccCCCcE
Confidence 3457888877755688999999976432 13478888765432111 00000 0112234567899999999
Q ss_pred EEEEeCc----------CCCeeEEECCC
Q 019979 115 YFYRCGR----------QGPEFEFKTPP 132 (333)
Q Consensus 115 Y~Y~v~~----------~s~~~~F~t~p 132 (333)
|..||.. +|+...|+|+.
T Consensus 454 Y~vrVRA~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 454 YTFRIRCSTETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp CEEEEECCCSSCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEeeCCCCCcCCCCCceeeECCC
Confidence 9999863 24556677754
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.83 E-value=0.35 Score=45.06 Aligned_cols=115 Identities=10% Similarity=0.002 Sum_probs=65.0
Q ss_pred CCeeEEEEeecCCCCCh------hhHHHHhhcC-CCCeEEccccccccccc----------------hhhHHHHH-Hhh-
Q 019979 135 FPITFAVAGDLGQTGWT------KSTLDHIGQC-KYDVHLLPGDLSYADYM----------------QHRWDTFG-ELV- 189 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~~------~~~~~~i~~~-~~d~vl~~GDl~~~~~~----------------~~~~~~~~-~~~- 189 (333)
.++++++.+.......+ .++++.+... +||.+|++|.+++.... ...++.++ ..+
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~ 225 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFT 225 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHH
Confidence 67899999887544321 3566777664 89999999999976531 12334433 333
Q ss_pred ---hhhhcCCceEEccCCCCCCC-CCCcc-ccccccccccccCc-CCCCCCCCceEEEEeCCEEEEEEec
Q 019979 190 ---QPLASARPWMVTQGNHEKES-IPLIM-DAFQSYNARWKMPF-EESGSNSNLYYSFDVAGAHLIMLGS 253 (333)
Q Consensus 190 ---~~l~~~~P~~~~~GNHD~~~-~~~~~-~~~~~~~~~~~~p~-~~~~~~~~~~ys~~~g~v~fi~lds 253 (333)
+.+...+-++.+||+||... ...+. ..+.. +...+|. + -..-..-..|.++++.|.+...
T Consensus 226 ~il~~l~~~t~VVlVPS~rD~~~~~~v~PQPpf~~--k~l~l~k~n--v~~~sNPc~~~in~v~igvss~ 291 (460)
T 3flo_A 226 PILKTISPHIQTVLIPSTKDAISNHAAYPQASLIR--KALQLPKRN--FKCMANPSSFQINEIYFGCSNV 291 (460)
T ss_dssp HHHTTSCTTSEEEEECCTTBTTCSCCSBSBCCCCT--TTTTCCTTT--EEECCBSEEEEETTEEEEECCS
T ss_pred HHHHhccCCCEEEEeCCcccccCCCCCcCCCCCCh--hhhcCCccc--EEEeCCCEEEEECCEEEEEEcH
Confidence 33334467999999999953 22221 11211 1111121 1 0011233568888888766554
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=91.54 E-value=0.38 Score=39.34 Aligned_cols=71 Identities=7% Similarity=0.045 Sum_probs=44.7
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCC-CCCCEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL-EHDTVY 115 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~p~t~Y 115 (333)
...|..+.+...+.++++++|.-..... .-.|+|....+... .+. ........+.|.+| +|++.|
T Consensus 8 P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~~-----~~~------~~~~~~~~~~i~~L~~~~t~Y 76 (215)
T 1bqu_A 8 PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DCK------AKRDTPTSCTVDYSTVYFVNI 76 (215)
T ss_dssp CCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CEE------CCSSCTTEEECSSCCCTTSCE
T ss_pred CCCCEeeEeEECCCCcEEEEcCCCCCCCCCceEEEEEEEcCCCcc-----ccc------cccCCcceEEEcCCccccccE
Confidence 3478888777667789999999764432 23555554321100 000 01222346789999 999999
Q ss_pred EEEeCc
Q 019979 116 FYRCGR 121 (333)
Q Consensus 116 ~Y~v~~ 121 (333)
.++|..
T Consensus 77 ~~~V~A 82 (215)
T 1bqu_A 77 EVWVEA 82 (215)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.46 E-value=0.72 Score=45.38 Aligned_cols=79 Identities=10% Similarity=0.148 Sum_probs=46.0
Q ss_pred CCCCCCceEEEEec--CCC---cEEEEEEcCCCCC----CcEEEEecc-CCCCCeeEEeeEEEEeeeeeecCeEEEEEeC
Q 019979 38 KPSSHPQQVHISLA--GDS---HMRVTWITDDESS----PSVVEYGTS-PGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (333)
Q Consensus 38 ~~~~~p~~v~l~~~--~~~---~~~v~W~t~~~~~----~~~v~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 107 (333)
.+...|..+.+... ..+ +++|+|.-..... .-.|+|... ....... ....... ...+....++|+
T Consensus 265 ~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~-~~~~~~~----~v~~~~~~~~l~ 339 (680)
T 1zlg_A 265 SAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVP-TKKKRRK----TTDGFQNSVILE 339 (680)
T ss_pred CCCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCC-ccceEEE----EEcCCeeEEEeC
Confidence 45667888888766 567 9999999543222 235666521 1110000 0000000 122344678899
Q ss_pred CCCCCCEEEEEeCc
Q 019979 108 PLEHDTVYFYRCGR 121 (333)
Q Consensus 108 ~L~p~t~Y~Y~v~~ 121 (333)
||+|++.|.+||..
T Consensus 340 ~L~p~t~Y~~~V~A 353 (680)
T 1zlg_A 340 KLQPDCDYVVELQA 353 (680)
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999863
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.33 E-value=0.077 Score=36.29 Aligned_cols=65 Identities=14% Similarity=0.093 Sum_probs=36.8
Q ss_pred EEEEcCCC--CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCc-----CC--CeeEE
Q 019979 58 VTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR-----QG--PEFEF 128 (333)
Q Consensus 58 v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~-----~s--~~~~F 128 (333)
|.|..... ...-.+.|..+......... ..++..+.-+|.||+||.+|.=++.+ .+ ..+.|
T Consensus 2 IqWnap~~shi~~YIL~w~pk~~~~~wKev----------~IPgh~nSYtIsGLkPGvtYegQLisV~r~g~~Evtrfdf 71 (89)
T 1q38_A 2 RGSNAPQPSHISKYILRWRPKNSVGRWKEA----------TIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDF 71 (89)
T ss_dssp CCCCCSSCSSCSEEEEEEEETTTTCCCEEE----------EECSSSSCCCCCCCCTTCCEEEEEEEECTTSCCCEEEEEE
T ss_pred ccccCCCcccceeeEEEEEecCCCCccEEE----------EcCCccceEEEeccCCCcEEEEEEEeeeecccCCceEEEE
Confidence 45653321 23446677766543322100 13344555568899999999988643 22 35777
Q ss_pred ECCC
Q 019979 129 KTPP 132 (333)
Q Consensus 129 ~t~p 132 (333)
+|-.
T Consensus 72 TT~~ 75 (89)
T 1q38_A 72 TTTS 75 (89)
T ss_dssp CSSS
T ss_pred Eecc
Confidence 7743
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=91.16 E-value=1.4 Score=42.01 Aligned_cols=110 Identities=14% Similarity=0.196 Sum_probs=57.3
Q ss_pred CccccCCCCCCccccCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCC-eeEEeeEEEEee
Q 019979 20 AEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYN-CGAEGESTSYRY 93 (333)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~-~~~~~~~~~~~~ 93 (333)
..|.|...+. ++.|+.. ++..|..+. ...+.++++|.|.-..... .-.|+|........ ....+....+..
T Consensus 316 ng~~ra~~d~-~~~~ct~-pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~ 392 (536)
T 3fl7_A 316 EGFFRAPQDP-ASMPCTR-PPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSE 392 (536)
T ss_dssp TTCBCCTTCC-TTSCCBC-CCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESS
T ss_pred ccccccCCCc-ccccccc-CCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEE
Confidence 3455544222 2334433 445788884 4467899999998654322 12566665321110 000000011110
Q ss_pred eeeecCeEEEEEeCCCCCCCEEEEEeCcC-----------CCeeEEECCCC
Q 019979 94 LFYRSGKIHHTVIGPLEHDTVYFYRCGRQ-----------GPEFEFKTPPA 133 (333)
Q Consensus 94 ~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~~-----------s~~~~F~t~p~ 133 (333)
. ........++|++|+|+|.|.|+|... +....++|++.
T Consensus 393 ~-~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~ 442 (536)
T 3fl7_A 393 P-PHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQT 442 (536)
T ss_dssp C-SSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSC
T ss_pred e-ecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeeccc
Confidence 0 111234567899999999999998531 23456777653
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.06 E-value=0.97 Score=44.70 Aligned_cols=88 Identities=15% Similarity=0.135 Sum_probs=55.2
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC------CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDES------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
+...|..+.+...+.++++|+|.-.... ..-.|+|....+......... .. .........+|++|+|+
T Consensus 359 p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~----~~--~~~~~~~~~~i~~L~p~ 432 (731)
T 2v5y_A 359 PMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEV----SW--DTENSHPQHTITNLSPY 432 (731)
T ss_dssp CSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEE----EC--CSSCSSCEEEECSCCSS
T ss_pred CCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeE----EE--EecCCcceEEECCCCCC
Confidence 4457888888877899999999875311 123577776553211111100 00 12233456789999999
Q ss_pred CEEEEEeCc-------CCCeeEEECCC
Q 019979 113 TVYFYRCGR-------QGPEFEFKTPP 132 (333)
Q Consensus 113 t~Y~Y~v~~-------~s~~~~F~t~p 132 (333)
+.|.++|.. .++...++|+.
T Consensus 433 t~Y~~~V~A~n~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 433 TNVSVKLILMNPEGRKESQELIVQTDE 459 (731)
T ss_dssp CEEEEEEEEECSSCEEECCCEEEECCC
T ss_pred CEEEEEEEEEcCCCCCCCceEEEEccC
Confidence 999999853 25567788753
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=91.04 E-value=0.79 Score=37.66 Aligned_cols=87 Identities=9% Similarity=0.039 Sum_probs=44.9
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC---C----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCC
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDDES---S----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~~---~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 110 (333)
.-...|..+.+....+....|+|...... . .-.|+|+...+..... ... . ..........+.+|.
T Consensus 96 Vkp~PP~nl~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~-~~~-----~--~~~~~~~~~~~~~L~ 167 (207)
T 1iar_B 96 VKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-IYN-----V--TYLEPSLRIAASTLK 167 (207)
T ss_dssp BCCCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-EEE-----E--CSSCCEEEECC----
T ss_pred cccCCCCCeEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCchhhe-eee-----e--ecCCcEEEEEHHHCC
Confidence 34457888877754466899999887321 1 2367777654322111 100 0 122344556667999
Q ss_pred CCCEEEEEeCc-----------CCCeeEEECCC
Q 019979 111 HDTVYFYRCGR-----------QGPEFEFKTPP 132 (333)
Q Consensus 111 p~t~Y~Y~v~~-----------~s~~~~F~t~p 132 (333)
||+.|..||.. +|+...|+|.+
T Consensus 168 p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~ 200 (207)
T 1iar_B 168 SGISYRARVRAWAQAYNTTWSEWSPSTKWHNSY 200 (207)
T ss_dssp -CCCEEEEEEEECGGGTCCCCCCCCCEEEC---
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCcCeEEECCC
Confidence 99999999963 35667888865
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=91.04 E-value=0.8 Score=40.30 Aligned_cols=71 Identities=14% Similarity=0.098 Sum_probs=45.5
Q ss_pred CCCCceEEEEecC--CCcEEEEEEcCCCC--C----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 40 SSHPQQVHISLAG--DSHMRVTWITDDES--S----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 40 ~~~p~~v~l~~~~--~~~~~v~W~t~~~~--~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
...|..+.+...+ .+++.|+|...... . .-.|+|+......+..+. .........|.+|+|
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~-----------~~~~~~~~~l~~L~p 265 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-----------VKDLQHHCVIHDAWS 265 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-----------CGGGCSEEEESSCCT
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEc-----------ccCCceEEEEeCCCC
Confidence 4578888887654 46999999976431 1 225777765432222111 011223567899999
Q ss_pred CCEEEEEeCc
Q 019979 112 DTVYFYRCGR 121 (333)
Q Consensus 112 ~t~Y~Y~v~~ 121 (333)
++.|.+||..
T Consensus 266 ~t~Y~~rVrA 275 (325)
T 1n26_A 266 GLRHVVQLRA 275 (325)
T ss_dssp TCCEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 9999999863
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=90.94 E-value=0.38 Score=40.55 Aligned_cols=80 Identities=13% Similarity=0.099 Sum_probs=46.9
Q ss_pred CCCCceEEEEecC--CC----cEEEEEEcCCCC--------CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEE
Q 019979 40 SSHPQQVHISLAG--DS----HMRVTWITDDES--------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTV 105 (333)
Q Consensus 40 ~~~p~~v~l~~~~--~~----~~~v~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (333)
...|..+.++... .+ ++.|.|...... -.-.|+|....+....... ......+.
T Consensus 131 p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------~~~~~~~~ 198 (236)
T 1axi_B 131 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSVP 198 (236)
T ss_dssp CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEEE
T ss_pred cCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe------------ccCCCEEE
Confidence 4467777655443 22 499999987432 1225667665432211110 11124577
Q ss_pred eCCCCCCCEEEEEeCc----------CCCeeEEECC
Q 019979 106 IGPLEHDTVYFYRCGR----------QGPEFEFKTP 131 (333)
Q Consensus 106 l~~L~p~t~Y~Y~v~~----------~s~~~~F~t~ 131 (333)
|.+|+||+.|.+||.. +|+...|+|+
T Consensus 199 l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 199 VYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp EEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred EeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 8899999999999963 2445566654
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.92 E-value=1 Score=37.41 Aligned_cols=88 Identities=11% Similarity=0.213 Sum_probs=53.1
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC---------CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCC
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDDES---------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~~---------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 108 (333)
.-...|..+.+.. ...+.|.|...... -.-.|+|......-....... .. ...+....+.+.+
T Consensus 99 Vkp~PP~nltv~~--~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~~W~~~~~~~-----~~-~~~~~~~~~~~~~ 170 (219)
T 3tgx_A 99 IKPAPPFDVTVTF--SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGDPWAVSPRRK-----LI-SVDSRSVSLLPLE 170 (219)
T ss_dssp BCCCCCEEEEEEE--SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTSCTTSCCEEE-----EE-CSSCSEEEECTTS
T ss_pred EEeCCCCceEEEe--CCCEEEEEeCCcCCccccccccCEEEEEEEecCCCCceecccce-----eE-ecCCCEEEEEecc
Confidence 3445688777763 46899999986321 123577777653211110111 00 1123455677889
Q ss_pred CCCCCEEEEEeCc--------------CCCeeEEECCCC
Q 019979 109 LEHDTVYFYRCGR--------------QGPEFEFKTPPA 133 (333)
Q Consensus 109 L~p~t~Y~Y~v~~--------------~s~~~~F~t~p~ 133 (333)
|.||+.|..||.. +|+...|+|++.
T Consensus 171 L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 171 FRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp SCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 9999999999842 256778998874
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=90.54 E-value=2.3 Score=37.84 Aligned_cols=81 Identities=21% Similarity=0.171 Sum_probs=49.7
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCc----EEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
..|..+.+.-...+++.+.|...... +.+ .|+|...+....... ...+......|.+|+|++.|
T Consensus 197 ~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~l~~~~~y 265 (389)
T 2jll_A 197 SSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIV-----------RSHGVQTMVVLNNLEPNTTY 265 (389)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEE-----------ECSTTCSEEEECSCCTTCEE
T ss_pred CCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEe-----------eccCCcceEEECCccCCCEE
Confidence 35667777666788999999854222 222 456665543222111 11223346788999999999
Q ss_pred EEEeCc--------CCCeeEEECCC
Q 019979 116 FYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p 132 (333)
.|+|.. .+....|+|.+
T Consensus 266 ~~~v~A~N~~G~~~~s~~~~~~t~~ 290 (389)
T 2jll_A 266 EIRVAAVNGKGQGDYSKIEIFQTLP 290 (389)
T ss_dssp EEEEEEEESSCBCCCCCCEEEECCC
T ss_pred EEEEEEEcCCccCCCCcceEEEecC
Confidence 999853 14456777754
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=90.54 E-value=1.6 Score=37.04 Aligned_cols=69 Identities=13% Similarity=0.199 Sum_probs=45.2
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC--CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDESS--PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
...|..+.+.......+.|.|....... .-.|+|+...+........ .......|.+|+|++.|..
T Consensus 137 P~PP~nl~v~~~~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~------------~~~~~~~l~~L~p~~~Y~v 204 (247)
T 2erj_C 137 PWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRYTF 204 (247)
T ss_dssp CCCCEEEEEEESSSSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEE------------CSSCEEEESCCCTTSCEEE
T ss_pred eCCCCeEEEEECCCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEec------------CCceEEEecCCCCCCEEEE
Confidence 4478888888766789999999874211 1257787654432222110 1123566789999999999
Q ss_pred EeC
Q 019979 118 RCG 120 (333)
Q Consensus 118 ~v~ 120 (333)
||.
T Consensus 205 qVR 207 (247)
T 2erj_C 205 RVR 207 (247)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=90.29 E-value=1.2 Score=38.91 Aligned_cols=81 Identities=12% Similarity=0.031 Sum_probs=45.5
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeEEEE--eeeeeecCeEEEEEeCCCCCCC
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSY--RYLFYRSGKIHHTVIGPLEHDT 113 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~L~p~t 113 (333)
...|..+++. ...+++.|+|........ -.|+|....+............- ............+.|.+|+||+
T Consensus 200 P~pP~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t 278 (314)
T 3bpo_C 200 PDPPHIKNLS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDT 278 (314)
T ss_dssp CCCCEEEEEE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTS
T ss_pred eCCCCEEEEE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCC
Confidence 4578888887 557899999998753221 35667665433221110000000 0000011235678899999999
Q ss_pred EEEEEeCc
Q 019979 114 VYFYRCGR 121 (333)
Q Consensus 114 ~Y~Y~v~~ 121 (333)
.|.+||..
T Consensus 279 ~Y~~qVra 286 (314)
T 3bpo_C 279 LNTVRIRV 286 (314)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEe
Confidence 99999863
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=89.92 E-value=3.5 Score=37.64 Aligned_cols=88 Identities=18% Similarity=0.162 Sum_probs=52.1
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCCCC----------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEE
Q 019979 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDESS----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTV 105 (333)
Q Consensus 36 ~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (333)
+......|..|.+...+ +.+.|+|....... .-.|+|+... .....+... ........+.
T Consensus 105 ~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~--------~~~~~~~~~~ 174 (419)
T 2gys_A 105 QHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL--------LSNTSQATLG 174 (419)
T ss_dssp GSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEE--------EESSSEEEEC
T ss_pred HcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeee--------cccceEEEec
Confidence 33455678899888666 69999999874321 1256676654 222111100 0122233333
Q ss_pred eCCCCCCCEEEEEeCc--------------CCCeeEEECCCC
Q 019979 106 IGPLEHDTVYFYRCGR--------------QGPEFEFKTPPA 133 (333)
Q Consensus 106 l~~L~p~t~Y~Y~v~~--------------~s~~~~F~t~p~ 133 (333)
+.+|.|++.|..||.. +|+...|+|++.
T Consensus 175 ~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~ 216 (419)
T 2gys_A 175 PEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 216 (419)
T ss_dssp TTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred hhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeecccc
Confidence 4499999999999862 145678888764
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=89.76 E-value=1.5 Score=35.53 Aligned_cols=70 Identities=13% Similarity=0.186 Sum_probs=46.1
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
...|..+++....+..+.|.|...... -.-.|+|+...+........ .......|.+|.|++.|..
T Consensus 99 P~pP~~l~~~~~~~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~------------~~~~~~~l~~l~p~~~Y~v 166 (199)
T 2b5i_C 99 PWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRYTF 166 (199)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEE------------CSSCEEEECSCCTTSCEEE
T ss_pred cCCCcEEEEEECCCCCEEEEECCCCCCCceEEEEEEeecCCcccEEEec------------cCceEEEecCCCCCcEEEE
Confidence 447888888866678999999987421 12358888755432222110 1123566789999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
||..
T Consensus 167 qVR~ 170 (199)
T 2b5i_C 167 RVRS 170 (199)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9963
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.21 E-value=0.88 Score=44.73 Aligned_cols=75 Identities=11% Similarity=0.157 Sum_probs=42.4
Q ss_pred CCC-ceEEEEecCCCcEEEEEEcCCCC-CC---cEEEEeccCCC-CCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 41 SHP-QQVHISLAGDSHMRVTWITDDES-SP---SVVEYGTSPGG-YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 41 ~~p-~~v~l~~~~~~~~~v~W~t~~~~-~~---~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
..| ..+.+.-.+.+++.|.|...... .. -.|+|+...+. ........ +... .......++|++|+|++.
T Consensus 161 ~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~~~~~~~---w~~v--~~~~~~~~~i~~L~P~t~ 235 (680)
T 1zlg_A 161 LKPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATH---WQTV--AQTTDERVQLTDIRPSRW 235 (680)
T ss_pred ccccccceEEeccCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcCccccCc---eEEE--EecCCCeEEeCCCCCCCE
Confidence 356 67777767799999999975221 11 35666654220 00000000 0000 011223577899999999
Q ss_pred EEEEeC
Q 019979 115 YFYRCG 120 (333)
Q Consensus 115 Y~Y~v~ 120 (333)
|.|||.
T Consensus 236 Y~frV~ 241 (680)
T 1zlg_A 236 YQFRVA 241 (680)
T ss_pred EEEEEE
Confidence 999985
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.15 E-value=0.19 Score=48.18 Aligned_cols=85 Identities=16% Similarity=0.127 Sum_probs=50.4
Q ss_pred CCCCceEEEEe--cCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCC
Q 019979 40 SSHPQQVHISL--AGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (333)
Q Consensus 40 ~~~p~~v~l~~--~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 113 (333)
...|..+.+.. ...+++.|+|....... .-.|+|....+......... ..........|.+|+|++
T Consensus 199 p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--------~~~~~~~~~~i~~L~p~t 270 (589)
T 3l5h_A 199 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 270 (589)
T ss_dssp CCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT--------SSCSCCSEEEECSCCSSC
T ss_pred cCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc--------cCcCceeEEEECCCCCCC
Confidence 34677777753 34889999998653221 23566766543222111000 011223456789999999
Q ss_pred EEEEEeCc-----------CCCeeEEECCC
Q 019979 114 VYFYRCGR-----------QGPEFEFKTPP 132 (333)
Q Consensus 114 ~Y~Y~v~~-----------~s~~~~F~t~p 132 (333)
.|.+||.. +|+...++|++
T Consensus 271 ~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~ 300 (589)
T 3l5h_A 271 EYVFRIRCMKEDGKGYWSDWSEEASGITYE 300 (589)
T ss_dssp CEEEEEEEEESSSCSCCCCCCCCBCCCCCC
T ss_pred EEEEEEEEEeCCCCCccCCCCCccccccCc
Confidence 99999863 14556677754
|
| >3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A | Back alignment and structure |
|---|
Probab=87.70 E-value=0.73 Score=40.52 Aligned_cols=61 Identities=15% Similarity=0.228 Sum_probs=34.9
Q ss_pred EEEec-CCCcEEEEEEcCCCCCCcEEEEeccCCCC---CeeEE--eeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 47 HISLA-GDSHMRVTWITDDESSPSVVEYGTSPGGY---NCGAE--GESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 47 ~l~~~-~~~~~~v~W~t~~~~~~~~v~y~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
.|... ..+.+.++|.+.......+=.|+.....- .+.+. ++.++|+ =+++.+|++|||.|.
T Consensus 23 ~L~at~~~~~v~LsWs~s~~~v~~~~VYRdT~s~~sgr~ria~~~~st~tyt-------------Dt~~~~GttYyYwVk 89 (344)
T 3b4n_A 23 TLMLSQKSDVNYLGWSTDESKVARQEVYRGTTSNPDLRERIAVLDAETRTFK-------------DADTNSGLNYWYWVD 89 (344)
T ss_dssp EEEEEEETTEEEEEEEECCSSEEEEEEEEESSSCGGGCEEEEEECSSCCEEE-------------ECCCCTTCCCEEEEE
T ss_pred eeeeeccCCeEEEEeecCCCCeeeEEEEccCCCCCCcceEEEeecccccEEE-------------ecCcCCCcEEEEEEE
Confidence 34433 48999999998852222233355443321 12222 2222333 258999999999986
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.38 E-value=2.1 Score=34.87 Aligned_cols=74 Identities=11% Similarity=0.044 Sum_probs=43.8
Q ss_pred eEEEEecCCCcEEEEEEcCCCC--------------CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCC
Q 019979 45 QVHISLAGDSHMRVTWITDDES--------------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (333)
Q Consensus 45 ~v~l~~~~~~~~~v~W~t~~~~--------------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 110 (333)
.|.+. ...+++.|.|...... -.-.|.|............ .....++|.+|+
T Consensus 98 ~v~~~-~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~-------------~~~~~~~l~~L~ 163 (201)
T 3lqm_A 98 GMQVE-VLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQIT-------------PQYDFEVLRNLE 163 (201)
T ss_dssp EEEEE-EETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEEC-------------CSSSEEEECSCC
T ss_pred EEEEE-EeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEE-------------ecCceEEEecCC
Confidence 57764 3368999999875311 1224555554332111100 111247899999
Q ss_pred CCCEEEEEeCc----------CCCeeEEECCC
Q 019979 111 HDTVYFYRCGR----------QGPEFEFKTPP 132 (333)
Q Consensus 111 p~t~Y~Y~v~~----------~s~~~~F~t~p 132 (333)
|+|.|..+|.. .|+...|+|.+
T Consensus 164 p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~ 195 (201)
T 3lqm_A 164 PWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTH 195 (201)
T ss_dssp TTCEEEEEEEEEETTTTEECCCCCCEEEECCC
T ss_pred CCCcEEEEEEEEeccCCCCCCcCCCEeEEeCC
Confidence 99999999863 14556677755
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=86.72 E-value=1.2 Score=38.45 Aligned_cols=72 Identities=8% Similarity=0.091 Sum_probs=44.4
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCC-CCCCE
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL-EHDTV 114 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~p~t~ 114 (333)
+...|..+.....+.++++++|....... .-.|+|....+... .. . ...+....+.|.+| +|++.
T Consensus 103 ~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~~-----~~---~---~~~~~~~~~~i~~L~~p~t~ 171 (303)
T 1i1r_A 103 PPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DC---K---AKRDTPTSCTVDYSTVYFVN 171 (303)
T ss_dssp CCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CE---E---CCSSCTTEEECSSCCCTTSC
T ss_pred CCCCCeeeEEEECCCCcEEEEccCCCCCCCCcCEEEEEEecCCCCc-----cC---C---CcCCCceEEEECCcCccccc
Confidence 34567778766566789999999764322 23555654321100 00 0 11223356789999 99999
Q ss_pred EEEEeCc
Q 019979 115 YFYRCGR 121 (333)
Q Consensus 115 Y~Y~v~~ 121 (333)
|.+||..
T Consensus 172 Y~f~V~A 178 (303)
T 1i1r_A 172 IEVWVEA 178 (303)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.35 E-value=3.4 Score=34.25 Aligned_cols=78 Identities=14% Similarity=0.112 Sum_probs=47.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-----C------------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-----S------------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHH 103 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-----~------------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (333)
..|. |.|+ ...+++.|.|.-.... + .-.|.|+...+... .... .. .+.
T Consensus 110 gPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~--~~~~---------~~--~~~ 174 (221)
T 4doh_R 110 GPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRT--WSQC---------VT--NHT 174 (221)
T ss_dssp CCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEE--EEEE---------EC--SSE
T ss_pred CCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcE--EEEe---------ec--CcE
Confidence 3454 8887 5678999999965321 0 12566666543211 0000 11 236
Q ss_pred EEeCCCCCCCEEEEEeCc----------CCCeeEEECCCC
Q 019979 104 TVIGPLEHDTVYFYRCGR----------QGPEFEFKTPPA 133 (333)
Q Consensus 104 ~~l~~L~p~t~Y~Y~v~~----------~s~~~~F~t~p~ 133 (333)
+.|.+|+|+|.|..+|.. .|+...|+|.+.
T Consensus 175 ~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 175 LVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp EEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred EEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 789999999999999853 145667777653
|
| >4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.08 E-value=1.6 Score=35.90 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=40.5
Q ss_pred EEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCc
Q 019979 46 VHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (333)
Q Consensus 46 v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 121 (333)
+.|+ ...+++.|.|......-.-.|.|+..+....... ... ......++|.+|+|++.|.++|..
T Consensus 115 v~v~-~~~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~-------~~~---~~~~~~~~i~~L~p~t~Ycv~Vra 179 (206)
T 4doh_B 115 MEIT-KDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHV-------KMV---RSGGIPVHLETMEPGAAYCVKAQT 179 (206)
T ss_dssp EEEE-EETTEEEEEECCCCTTCEEEEEEEESSSSCCCEE-------EEE---CCSSSEEEEEECCSSSCEEEEEEE
T ss_pred EEEE-eCCCEEEEEecCCCCcEEEEEEEEEcCCCceeEE-------eEE---ccCCeEEEEeCCCCCCcEEEEEEE
Confidence 6676 5688999999855322344677877654322110 000 011235789999999999999863
|
| >2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.02 E-value=4.4 Score=34.45 Aligned_cols=69 Identities=17% Similarity=0.221 Sum_probs=41.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcE----EEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSV----VEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
..|..+.+.....+++++.|...... .... |+|...+.. .....+. .. ....+|.+|+|++.|
T Consensus 200 ~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~-~w~~~~~---------~~--~~~~~i~~l~~~~~y 267 (305)
T 2nzi_A 200 DPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAE-RWLRVGQ---------AR--ETRYTVINLFGKTSY 267 (305)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSC-CEEEEEE---------ES--SSEEEECSCCSSCEE
T ss_pred CCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCC-ccEECcc---------cc--CceEEecCCCCCCeE
Confidence 35777766656688999999864222 2233 344443322 1111111 11 235678999999999
Q ss_pred EEEeCc
Q 019979 116 FYRCGR 121 (333)
Q Consensus 116 ~Y~v~~ 121 (333)
.|||..
T Consensus 268 ~~~~~A 273 (305)
T 2nzi_A 268 QFRVIA 273 (305)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.76 E-value=4.5 Score=35.20 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=42.9
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC-----------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCC
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS-----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 109 (333)
..|. |.+.. ..+++.|.|. ..... .-.|.|+..+........ . ....++|.+|
T Consensus 103 ~pP~-v~~~~-~~~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~-----------~--~~~~~~l~~L 166 (306)
T 3s98_A 103 GPPE-VHLEA-EDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIE-----------N--IYSRHKIYKL 166 (306)
T ss_dssp CCCE-EEEEE-CSSCEEEEEE-CC---CCCC-----CCEEEEEEEETTTCCCEEEE-----------E--ECTEEEECSC
T ss_pred CCCe-EEEEE-cCCEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCCCeEEEe-----------c--ccceEEEccC
Confidence 3454 77764 3468999998 32211 114556555433221111 0 1235789999
Q ss_pred CCCCEEEEEeCc----------CCCeeEEECC
Q 019979 110 EHDTVYFYRCGR----------QGPEFEFKTP 131 (333)
Q Consensus 110 ~p~t~Y~Y~v~~----------~s~~~~F~t~ 131 (333)
+|+|.|.++|.. .|+...++|.
T Consensus 167 ~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~ 198 (306)
T 3s98_A 167 SPETTYCLKVKAALLTSWKIGVYSPVHCIKTT 198 (306)
T ss_dssp CTTCEEEEEEEEEEGGGTEECCCCCCEEEECC
T ss_pred CCCCeEEEEEEEEEccCCCCCCCCCcEeeEec
Confidence 999999999852 1455566664
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=80.93 E-value=0.97 Score=37.48 Aligned_cols=15 Identities=27% Similarity=0.359 Sum_probs=12.5
Q ss_pred hCCCcEEEecCcccc
Q 019979 314 AASVDLVLAGHVHAY 328 (333)
Q Consensus 314 ~~~v~lvl~GH~H~y 328 (333)
..+++++++||+|.-
T Consensus 176 ~~~~~~vv~GHth~~ 190 (221)
T 1g5b_A 176 IKGADTFIFGHTPAV 190 (221)
T ss_dssp CBTSSEEEECSSCCS
T ss_pred ccCCCEEEECCCCCc
Confidence 357899999999975
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.79 E-value=8.9 Score=31.67 Aligned_cols=74 Identities=7% Similarity=0.023 Sum_probs=34.8
Q ss_pred EEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeE---EeeEEEEeeeeeecCeEEEE-------EeCCCCCCC
Q 019979 48 ISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGA---EGESTSYRYLFYRSGKIHHT-------VIGPLEHDT 113 (333)
Q Consensus 48 l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-------~l~~L~p~t 113 (333)
+...+.+++.|.|......... .|+|........... ......+............+ .+.+|+|++
T Consensus 95 ~~~~~~~sv~l~W~~P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~t 174 (232)
T 4go6_B 95 KISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKP 174 (232)
T ss_dssp EEEEETTEEEEEEECCSCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSSE
T ss_pred EEecCCCEEEEEEeCCCCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCccCC
Confidence 3334588999999976433222 566655443221110 00000111010111122222 356899999
Q ss_pred EEEEEeCc
Q 019979 114 VYFYRCGR 121 (333)
Q Consensus 114 ~Y~Y~v~~ 121 (333)
.|.|||..
T Consensus 175 ~Y~frV~A 182 (232)
T 4go6_B 175 AIIFRIAA 182 (232)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEE
Confidence 99999863
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=80.51 E-value=6.3 Score=35.77 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=37.6
Q ss_pred eEEEEecCCCcEEEEEEcCCCCC-----------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCC
Q 019979 45 QVHISLAGDSHMRVTWITDDESS-----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (333)
Q Consensus 45 ~v~l~~~~~~~~~v~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 113 (333)
.|.+.. ..+++.|+|. ..... .-.|.|+..++....... +.....+|.+|+|++
T Consensus 110 ~v~~~~-~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~-------------~~~~~~~i~~L~p~t 174 (414)
T 3se4_A 110 EVHLEA-EDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIE-------------NIYSRHKIYKLSPET 174 (414)
T ss_dssp EEEEEE-CSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEE-------------EECSEEEECCCCTTC
T ss_pred eEEEEE-cCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEe-------------cCCcEEEEcCCCCCC
Confidence 376663 3568999999 53221 125666665543211111 112357899999999
Q ss_pred EEEEEeC
Q 019979 114 VYFYRCG 120 (333)
Q Consensus 114 ~Y~Y~v~ 120 (333)
.|.++|.
T Consensus 175 ~Y~~~V~ 181 (414)
T 3se4_A 175 TYCLKVK 181 (414)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9999985
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 333 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 6e-49 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 2e-31 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 1e-29 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 7e-14 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 1e-07 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 7e-06 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 3e-04 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 4e-04 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 0.002 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 164 bits (415), Expect = 6e-49
Identities = 91/206 (44%), Positives = 119/206 (57%), Gaps = 8/206 (3%)
Query: 136 PITFAVAGDLGQTGWTKSTLDHIGQC--KYDVHLLPGDLSYAD----YMQHRWDTFGELV 189
P TF + GDLGQ+ + +TL H K L GDLSYAD + RWDT+G
Sbjct: 7 PYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFT 66
Query: 190 QPLASARPWMVTQGNHEKESIPLI--MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAH 247
+ + +PW+ T GNHE E P I + F+ ++ R+ +P+E S S S +YS A AH
Sbjct: 67 ERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAH 126
Query: 248 LIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAI 307
+I+L SY+ Y + QY WLK +L KV R +TPWL+VL+H P YNS H EG+ M
Sbjct: 127 IIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTK 186
Query: 308 MEPLLYAASVDLVLAGHVHAYERSVR 333
E VD+V AGHVHAYERS R
Sbjct: 187 FEAWFVKYKVDVVFAGHVHAYERSER 212
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 112 bits (281), Expect = 2e-31
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 31 LEFPWDPKPSSH--PQQVHISLAGD--SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEG 86
L+ P + PQQVHI+ M ++W+T DE S V Y + G A+G
Sbjct: 5 LDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKG 64
Query: 87 ESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQG--PEFEFKTPP 132
+ ++YR+ Y SG IHHT I L+++T Y+Y G + F F TPP
Sbjct: 65 KMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 107 bits (269), Expect = 1e-29
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 27 PRRTLEFPWD------PKPSSHPQQVHISLAGD--SHMRVTWIT-DDESSPSVVEYGTSP 77
++ PWD P + PQQVHI+ + ++W T D++ + V Y +
Sbjct: 3 NAEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSEN 62
Query: 78 GGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQG--PEFEFKTPP 132
A G +Y+Y Y S IHH I LE+DT Y+YR G +F F TPP
Sbjct: 63 SKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 69.0 bits (167), Expect = 7e-14
Identities = 44/228 (19%), Positives = 67/228 (29%), Gaps = 37/228 (16%)
Query: 136 PITFAVAGDLG-----------QTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDT 184
+ F GD G + K+ + D L GD Y + D
Sbjct: 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDK 63
Query: 185 ------FGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMP-----FEESGS 233
P PW V GNH+ A+ + RW P
Sbjct: 64 RFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIP 123
Query: 234 NSNLYYSFDVAGAHLIMLGSYADYDEY----------SDQYRWLKDDLSKVDRKKTPWLL 283
SN+ + + + S + Q W+K L+ K ++L
Sbjct: 124 RSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKEDYVL 180
Query: 284 VLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERS 331
V H P ++ A G ++ + PLL V L GH H +
Sbjct: 181 VAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYL 226
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 50.1 bits (118), Expect = 1e-07
Identities = 30/235 (12%), Positives = 57/235 (24%), Gaps = 54/235 (22%)
Query: 152 KSTLDHIGQCKYDVHLLPGDLSYAD--YMQHRWDTFGELVQPLASAR-PWMVTQGNHEKE 208
+ + + + + GD+ ++ L + GNHE
Sbjct: 39 RDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFY 98
Query: 209 SIPLIMDAFQSYNARWKM----PFEESGSNSNLYYSFDVAGAHLIMLGSY---------- 254
+ N+ + + G + Y ++L +Y
Sbjct: 99 NFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEE 158
Query: 255 ------------------------------------ADYDEYSDQYRWLKDDLSKVDRKK 278
+ Q +WL L+ D K+
Sbjct: 159 SEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ 218
Query: 279 TPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
L + H+P + A++ L SV +AGH H R
Sbjct: 219 ERVL-IFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD 272
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 44.3 bits (103), Expect = 7e-06
Identities = 17/176 (9%), Positives = 37/176 (21%), Gaps = 6/176 (3%)
Query: 155 LDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214
+ D L G+L D + P G + +
Sbjct: 25 VKLAPDTGADAIALIGNL--MPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLR 82
Query: 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKV 274
+A +M I + E W+ + K
Sbjct: 83 EAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKA 142
Query: 275 DRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330
+ + + L ++ + +++ + LVL
Sbjct: 143 LWELKDYPKIFLFHTMPYHKGLNEQGSHEVAHLIKT----HNPLLVLVAGKGQKHE 194
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 39.7 bits (91), Expect = 3e-04
Identities = 21/175 (12%), Positives = 52/175 (29%), Gaps = 14/175 (8%)
Query: 162 KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYN 221
+ D ++ GD+ + +++ P + GNH+ + F Y
Sbjct: 41 RPDAVVVSGDIVN-CGRPEEYQVARQILGS--LNYPLYLIPGNHDDK------ALFLEYL 91
Query: 222 ARWKMPFEESGSNSNLYYSFDVAGAHLIMLG-SYADYDEYSDQYRWLKDDLSKVDRKKTP 280
+N+ + D L+ + S A + + +++
Sbjct: 92 QPLCPQL--GSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDK 149
Query: 281 WLLVLLHVPWYNSNEAH--QGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333
+ +H P A + ++ + S+ + GH H+ +
Sbjct: 150 PATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY 204
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 39.0 bits (89), Expect = 4e-04
Identities = 27/181 (14%), Positives = 51/181 (28%), Gaps = 15/181 (8%)
Query: 152 KSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209
L+ + Q + D + GDL+ R +
Sbjct: 33 GELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRK-----------LRGLVEPFAAQLGAE 81
Query: 210 IPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS--YADYDEYSDQYRWL 267
+ +M K +E+ S + L + G +I+L + + +
Sbjct: 82 LVWVMGNHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 141
Query: 268 KDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327
+L L H P + + A + +L V +LAGH+H
Sbjct: 142 WLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHY 201
Query: 328 Y 328
Sbjct: 202 S 202
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 36.6 bits (83), Expect = 0.002
Identities = 25/191 (13%), Positives = 55/191 (28%), Gaps = 11/191 (5%)
Query: 141 VAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMV 200
V G++ + + + + + + + ++ F E+ V
Sbjct: 35 VVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFREI---GELGVKTFV 91
Query: 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEE--SGSNSNLYYSFDVAGAHLIMLGSYADYD 258
G ++ PL + +Y A P + F+V G ++ + D
Sbjct: 92 VPGKND---APLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEED 148
Query: 259 EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS-- 316
RW + + K + P LV + + D +
Sbjct: 149 FVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSL 208
Query: 317 -VDLVLAGHVH 326
++ + GHV
Sbjct: 209 NPEVAIVGHVG 219
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 333 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.95 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.9 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.89 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.88 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.87 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.86 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.75 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.72 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.28 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.1 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.02 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.01 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.0 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.86 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.78 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.65 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.47 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.14 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.09 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.92 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.9 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.88 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.87 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.86 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.81 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.81 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.76 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.72 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.71 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.71 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 97.68 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.61 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.6 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 97.59 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 97.59 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.59 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.58 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.58 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 97.57 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.56 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.55 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.5 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 97.49 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.48 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 97.48 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.46 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.46 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 97.45 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.44 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.43 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.43 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.41 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 97.41 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.41 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 97.4 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.36 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.33 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 97.32 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 97.29 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.29 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.27 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 97.26 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 97.24 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.24 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.23 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 97.22 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 97.13 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.13 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 97.11 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.1 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 97.1 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 97.09 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.08 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 97.04 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 97.02 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 97.01 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.99 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 96.99 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 96.88 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.86 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.83 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.83 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.83 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.78 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.77 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 96.76 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.76 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 96.7 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.65 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 96.62 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 96.59 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.57 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.52 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 96.46 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 96.37 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.28 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.03 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 95.97 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 95.64 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 95.52 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 95.37 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 94.85 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 94.8 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 94.34 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 94.28 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 94.17 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 93.57 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 91.9 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 91.76 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 91.61 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 88.67 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 85.03 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=5.5e-43 Score=315.38 Aligned_cols=204 Identities=45% Similarity=0.756 Sum_probs=173.3
Q ss_pred ECCCCCCCeeEEEEeecCCCCChhhHHHHh--hcCCCCeEEccccccccccc----hhhHHHHHHhhhhhhcCCceEEcc
Q 019979 129 KTPPAQFPITFAVAGDLGQTGWTKSTLDHI--GQCKYDVHLLPGDLSYADYM----QHRWDTFGELVQPLASARPWMVTQ 202 (333)
Q Consensus 129 ~t~p~~~~~~f~~~gD~~~~~~~~~~~~~i--~~~~~d~vl~~GDl~~~~~~----~~~~~~~~~~~~~l~~~~P~~~~~ 202 (333)
+|.| +.|+||+++||+|......+.+..+ ...+|||||++||++|.++. ..+|+.|++.++++...+|+++++
T Consensus 1 ~~g~-~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~ 79 (312)
T d2qfra2 1 QTGL-DVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTA 79 (312)
T ss_dssp CCCS-SCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECC
T ss_pred CCCC-CCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcceEEEec
Confidence 3555 7899999999998776656666543 46789999999999986543 568999999999998889999999
Q ss_pred CCCCCCCCCC--ccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCC
Q 019979 203 GNHEKESIPL--IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTP 280 (333)
Q Consensus 203 GNHD~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~ 280 (333)
||||+...+. ....+..|..+|.+|.++.....+.||+|++|+++||+||++..+..+.+|++||+++|+++++++.+
T Consensus 80 GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 159 (312)
T d2qfra2 80 GNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETP 159 (312)
T ss_dssp CGGGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHTCCTTTCC
T ss_pred ccccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHHHHHHHHHhhcCCC
Confidence 9999854322 12456778888999987766667889999999999999999988888899999999999998877889
Q ss_pred eEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccccccccC
Q 019979 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSVR 333 (333)
Q Consensus 281 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R~~~ 333 (333)
|+||++|+|+|++..........+++.|.++|++++||++|+||.|.|||++|
T Consensus 160 w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p 212 (312)
T d2qfra2 160 WLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSER 212 (312)
T ss_dssp EEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECS
T ss_pred EEEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEee
Confidence 99999999999887665556667889999999999999999999999999986
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.95 E-value=1.3e-28 Score=219.18 Aligned_cols=186 Identities=25% Similarity=0.380 Sum_probs=130.9
Q ss_pred CCCeeEEEEeecCCCCCh-----------hhHHHHhhcCCCCeEEccccccccccc----hhhHHHHHHhh-h-hhhcCC
Q 019979 134 QFPITFAVAGDLGQTGWT-----------KSTLDHIGQCKYDVHLLPGDLSYADYM----QHRWDTFGELV-Q-PLASAR 196 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-----------~~~~~~i~~~~~d~vl~~GDl~~~~~~----~~~~~~~~~~~-~-~l~~~~ 196 (333)
...+||+++||+|..... ..+.+.+++.+|||||++||++|.++. ..+|..+...+ . .....+
T Consensus 2 ~~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (302)
T d1utea_ 2 TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNV 81 (302)
T ss_dssp CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTC
T ss_pred CCCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCC
Confidence 357999999999865432 123445567899999999999987554 33454433322 2 234469
Q ss_pred ceEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeC------CEEEEEEeccC---------CC----
Q 019979 197 PWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVA------GAHLIMLGSYA---------DY---- 257 (333)
Q Consensus 197 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g------~v~fi~lds~~---------~~---- 257 (333)
|+++++||||+.........+..+..++.+| ..+|++.++ .++|+++|+.. ..
T Consensus 82 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~~~ 153 (302)
T d1utea_ 82 PWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPER 153 (302)
T ss_dssp CEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCS
T ss_pred ceEEeecccccccccccccchhhccccccCC--------CcccceeecccCCCCcEEEEEccceeEeecccccccccccc
Confidence 9999999999854322112233344444444 346666543 69999999731 00
Q ss_pred ----CCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccccccc
Q 019979 258 ----DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSV 332 (333)
Q Consensus 258 ----~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R~~ 332 (333)
....+|++||++.|++. +.+|+|+++|+|+++... .+.....+..|.++|++++|+++||||+|.|+|+.
T Consensus 154 ~~~~~~~~~Q~~WL~~~L~~~---~~~~~iv~~h~~~~~~~~--~~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~~ 227 (302)
T d1utea_ 154 PRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAE--HGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ 227 (302)
T ss_dssp CSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSS--SCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEE
T ss_pred cccchhHHHHHHHHHHHHHhh---ccCceEEEEeccccccCC--CCCchhhhhhhhHHHHhcCceEEEeCCCcceEEEe
Confidence 01368999999999986 557999999999987643 23445678899999999999999999999999974
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.90 E-value=1.5e-23 Score=182.57 Aligned_cols=181 Identities=19% Similarity=0.235 Sum_probs=124.5
Q ss_pred CCCeeEEEEeecCCCCCh-------------hhHHHHhh--cCCCCeEEccccccccccchhhHHHHHHhhhhhhc--CC
Q 019979 134 QFPITFAVAGDLGQTGWT-------------KSTLDHIG--QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--AR 196 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-------------~~~~~~i~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~ 196 (333)
...+||++++|+|..... +++++.++ ..+|||||++||+++.+. ..+++.+.+.+.++.. .+
T Consensus 2 ~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~-~~~~~~~~~~l~~~~~~~~~ 80 (256)
T d2hy1a1 2 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-PAAYRKLRGLVEPFAAQLGA 80 (256)
T ss_dssp CCSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCC-HHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-hhHHHHHHHHhhhhhhhcCC
Confidence 357999999999964321 33455554 458999999999997544 4567777777665543 48
Q ss_pred ceEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC----CCCHHHHHHHHHHhh
Q 019979 197 PWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLS 272 (333)
Q Consensus 197 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~WL~~~L~ 272 (333)
|++.++||||.. ..+..+ +... .......+|+++.++++|+++|+.... ....+|++||++.|+
T Consensus 81 p~~~v~GNHD~~------~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~wl~~~L~ 148 (256)
T d2hy1a1 81 ELVWVMGNHDDR------AELRKF---LLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELA 148 (256)
T ss_dssp EEEECCCTTSCH------HHHHHH---TTCC---CCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHHHHHHHT
T ss_pred CEEEEcccccch------hhhhhh---hccc---cccccccceEEEecccceeeeeeeecCCcCCcccHHHHHHHHHHHH
Confidence 999999999962 122221 1111 112235678899999999999986432 234789999999999
Q ss_pred cccCCCCCeEEEEeccccccCCCCCC-CCChhHHHHHHHHHHhCCCcEEEecCcccccc
Q 019979 273 KVDRKKTPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (333)
Q Consensus 273 ~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 330 (333)
+... +.+||++|+|++....... .......+.+.+++++++|+++||||.|...+
T Consensus 149 ~~~~---~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~ 204 (256)
T d2hy1a1 149 TPAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTN 204 (256)
T ss_dssp SCCT---TCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred hhhc---cCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhc
Confidence 8632 3488999999876533110 11112246788999999999999999997543
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.89 E-value=2.9e-23 Score=182.40 Aligned_cols=180 Identities=16% Similarity=0.216 Sum_probs=121.6
Q ss_pred eeEEEEeecCCCCC-------------hhhHHHHhh--cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEc
Q 019979 137 ITFAVAGDLGQTGW-------------TKSTLDHIG--QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-------------~~~~~~~i~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~ 201 (333)
++|+.++|+|.... .+++++.++ ..+||+||++||+++.+. ...|+.+.+.++++. +|++.+
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~-~~~y~~~~~~l~~l~--~p~~~i 77 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-PEEYQVARQILGSLN--YPLYLI 77 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-HHHHHHHHHHHTTCS--SCEEEE
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCc-chhHHHHHHHHhccC--CCEEEE
Confidence 47999999996422 124555554 458999999999998543 556777777776653 899999
Q ss_pred cCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC----CCCHHHHHHHHHHhhcccCC
Q 019979 202 QGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVDRK 277 (333)
Q Consensus 202 ~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~WL~~~L~~~~~~ 277 (333)
+||||... .+..+...+. +. .........|.++.++++||+||+.... ....+|++||++.|++..
T Consensus 78 ~GNHD~~~------~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~L~~~~-- 147 (271)
T d3d03a1 78 PGNHDDKA------LFLEYLQPLC-PQ-LGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGG-- 147 (271)
T ss_dssp CCTTSCHH------HHHHHHGGGS-GG-GCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHT--
T ss_pred ecCccchH------HHHHHhhhhh-hc-cccccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHHHhhhc--
Confidence 99999831 1111111110 00 0011134567888899999999986432 235899999999999863
Q ss_pred CCCeEEEEeccccccCCCCCCCC-ChhHHHHHHHHHHhC-CCcEEEecCcccccc
Q 019979 278 KTPWLLVLLHVPWYNSNEAHQGE-GDGMMAIMEPLLYAA-SVDLVLAGHVHAYER 330 (333)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~-~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~R 330 (333)
+ +++||++|||++.....+... .....+++.++++++ +|+++|+||.|....
T Consensus 148 ~-~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~ 201 (271)
T d3d03a1 148 D-KPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTM 201 (271)
T ss_dssp T-SCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEE
T ss_pred c-ceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhc
Confidence 2 347888899887654432211 112346899999998 699999999997543
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.88 E-value=3.4e-22 Score=150.67 Aligned_cols=95 Identities=39% Similarity=0.666 Sum_probs=82.6
Q ss_pred CCCCCCceEEEEecC--CCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 38 KPSSHPQQVHISLAG--DSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~--~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
+...+|+||||++++ .++|+|+|+|.+.+..+.|+||.+++.+...+.+.+..+.......+++|+|+|+||+|||.|
T Consensus 14 ~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v~Lt~L~P~T~Y 93 (112)
T d2qfra1 14 PGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKY 93 (112)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEEEECSCCTTCEE
T ss_pred CCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEEEECCCCCCCEE
Confidence 446789999999987 589999999987778899999999988888888887666554456789999999999999999
Q ss_pred EEEeCcC--CCeeEEECCC
Q 019979 116 FYRCGRQ--GPEFEFKTPP 132 (333)
Q Consensus 116 ~Y~v~~~--s~~~~F~t~p 132 (333)
+|||++. |++++|+|+|
T Consensus 94 ~YrVG~~~~S~~~~F~T~P 112 (112)
T d2qfra1 94 YYEVGLRNTTRRFSFITPP 112 (112)
T ss_dssp EEEECCSSSCEEEEEECCC
T ss_pred EEEECCCCceeeEEEEcCC
Confidence 9999974 8899999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.87 E-value=1.1e-21 Score=149.49 Aligned_cols=94 Identities=35% Similarity=0.534 Sum_probs=80.4
Q ss_pred CCCCCceEEEEecC--CCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 39 PSSHPQQVHISLAG--DSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 39 ~~~~p~~v~l~~~~--~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
....|+||||++++ .++|+|+|+|... .+.+.|+||..++.+...+.+.+..|.......+++|+|+|+||+|||+|
T Consensus 21 ~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~LtgL~P~T~Y 100 (119)
T d1xzwa1 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKY 100 (119)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCEE
T ss_pred CCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECCCCCCCEE
Confidence 35689999999997 6899999999543 45679999999988888888887666654456789999999999999999
Q ss_pred EEEeCcC--CCeeEEECCC
Q 019979 116 FYRCGRQ--GPEFEFKTPP 132 (333)
Q Consensus 116 ~Y~v~~~--s~~~~F~t~p 132 (333)
+|||++. |++++|+|+|
T Consensus 101 ~YrVG~~~~S~~~~F~T~P 119 (119)
T d1xzwa1 101 YYRLGFGDAKRQFWFVTPP 119 (119)
T ss_dssp EEEECCGGGCEEEEEECCC
T ss_pred EEEECCCCccceEEEeCCC
Confidence 9999974 8899999997
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.86 E-value=6.1e-22 Score=175.44 Aligned_cols=192 Identities=17% Similarity=0.141 Sum_probs=119.2
Q ss_pred eeEEEEeecCCCCC--------------------hhhHHHHhhcCCCCeEEccccccccccc--hhhHHHHHHhhhhhhc
Q 019979 137 ITFAVAGDLGQTGW--------------------TKSTLDHIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLAS 194 (333)
Q Consensus 137 ~~f~~~gD~~~~~~--------------------~~~~~~~i~~~~~d~vl~~GDl~~~~~~--~~~~~~~~~~~~~l~~ 194 (333)
|||++++|+|.+.. .+++++.+++.+|||||++||+++.... ......+....+.+..
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDA 83 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHT
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHHH
Confidence 99999999996521 1234566678999999999999975332 1111222233333322
Q ss_pred -CCceEEccCCCCCCCCCCcccccccccc--cc--ccCcCCCCCCCCceEEEEeCCEEEEEEeccCC-------------
Q 019979 195 -ARPWMVTQGNHEKESIPLIMDAFQSYNA--RW--KMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD------------- 256 (333)
Q Consensus 195 -~~P~~~~~GNHD~~~~~~~~~~~~~~~~--~~--~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~------------- 256 (333)
.+|+++++||||................ ++ .......+......+....++++|+.+++...
T Consensus 84 ~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (320)
T d2nxfa1 84 CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHT 163 (320)
T ss_dssp TCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHHH
T ss_pred cCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCcccccccccccccccc
Confidence 4999999999997432110000000000 00 00000111123455677889999999986310
Q ss_pred ---------------------------------CCCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChh
Q 019979 257 ---------------------------------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDG 303 (333)
Q Consensus 257 ---------------------------------~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~ 303 (333)
...+.+|++||++.|+++++ +..++|+++|+|++.......... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-~~~~viv~~H~p~~~~~~~~~~~~-~ 241 (320)
T d2nxfa1 164 HSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPVHPCAADPICLA-W 241 (320)
T ss_dssp HHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCCCTTSSCGGGSC-T
T ss_pred cccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-cCCceEEEECCCCccCCCCCccch-h
Confidence 01258899999999998754 335699999999876544321111 2
Q ss_pred HHHHHHHHHHhC-CCcEEEecCcccccc
Q 019979 304 MMAIMEPLLYAA-SVDLVLAGHVHAYER 330 (333)
Q Consensus 304 ~~~~l~~l~~~~-~v~lvl~GH~H~y~R 330 (333)
..+++.++|.++ +|+++|+||.|.+++
T Consensus 242 ~~~~~~~~l~~~~~V~~v~~GH~H~~~~ 269 (320)
T d2nxfa1 242 NHEAVLSVLRSHQSVLCFIAGHDHDGGR 269 (320)
T ss_dssp THHHHHHHHHTCTTEEEEEECSCTTCEE
T ss_pred hHHHHHHHHHhCCCeeEEEeCCcCCcCe
Confidence 357789999998 599999999998764
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.75 E-value=2.1e-18 Score=146.05 Aligned_cols=177 Identities=12% Similarity=0.001 Sum_probs=112.8
Q ss_pred CeeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCCcc
Q 019979 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~~~ 214 (333)
+-+|+++||+|.... .+++++.+.+.++|+||++||+++.+....++..+.+.+..+ .+|+++++||||......
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~--~~pv~~i~GNHD~~~~~~-- 80 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYVPGPQDAPIWEY-- 80 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEECCTTSCSHHHH--
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccc--cceEEEEecCCCchhhhh--
Confidence 356789999986532 245666667789999999999997665545555555555444 389999999999732110
Q ss_pred ccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCC----------CCCCHHHHHHHHHHhhcccCCCCCeEEE
Q 019979 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD----------YDEYSDQYRWLKDDLSKVDRKKTPWLLV 284 (333)
Q Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~----------~~~~~~q~~WL~~~L~~~~~~~~~~~iv 284 (333)
....+......+. .......+.+..+++.++.++.... .....++.+|+.+.++... ....|+
T Consensus 81 -~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~il 153 (228)
T d1uf3a_ 81 -LREAANVELVHPE---MRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELK---DYPKIF 153 (228)
T ss_dssp -HHHHHHHHHHCTT---EEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSC---SCCEEE
T ss_pred -hhhhccccccccc---ccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhcc---CCceEE
Confidence 0000000000000 0001233556778888888775211 1124678889988887753 234899
Q ss_pred EeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccc
Q 019979 285 LLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (333)
Q Consensus 285 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 328 (333)
++|+|++.......+ .+.+.+++++++++++++||+|..
T Consensus 154 ~~H~p~~~~~~~~~~-----~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 154 LFHTMPYHKGLNEQG-----SHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp EESSCBCBTTTBTTS-----BHHHHHHHHHHCCSEEEECCSSCE
T ss_pred EEeeeccCccccccc-----cHHHHHHHHhcCCcEEEEcccccc
Confidence 999998765432222 256778889999999999999964
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.72 E-value=8.9e-18 Score=144.43 Aligned_cols=184 Identities=10% Similarity=0.097 Sum_probs=108.3
Q ss_pred CeeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHH-----------------------HHHhhhh
Q 019979 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDT-----------------------FGELVQP 191 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~-----------------------~~~~~~~ 191 (333)
+.||+++||+|.... ..++++.+.+.+||+||++||+++.......|.. +...++.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~~ 81 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 81 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhHHHHHHH
Confidence 579999999996532 2456667778999999999999976543332221 2223344
Q ss_pred hhc-CCceEEccCCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCC---C------CCH
Q 019979 192 LAS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY---D------EYS 261 (333)
Q Consensus 192 l~~-~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~---~------~~~ 261 (333)
+.. .+|++.++||||...... ....+......+. .......+.+..+++.|+.+++.... . ...
T Consensus 82 L~~~~~pv~~i~GNHD~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T d2yvta1 82 IGELGVKTFVVPGKNDAPLKIF---LRAAYEAETAYPN---IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPR 155 (257)
T ss_dssp HHTTCSEEEEECCTTSCCHHHH---HHHHHHTTTTCTT---EEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEH
T ss_pred HHhcCCcEEEEeCCCcchhhHH---HHHhccccccccc---cccccceeEEecCCeEEEEeccccCCccccchhhhhhhh
Confidence 433 389999999999732110 1111111110110 00012334455677888877653211 0 113
Q ss_pred HHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCC--ChhHHHHHHHHHHhCCCcEEEecCcccc
Q 019979 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE--GDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (333)
Q Consensus 262 ~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~~~v~lvl~GH~H~y 328 (333)
.+..|++..+++. +...+|+++|+|++.+....... .....+.+.+++++++++++++||.|..
T Consensus 156 ~~~~~~~~~~~~~---~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~ 221 (257)
T d2yvta1 156 WYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKG 221 (257)
T ss_dssp HHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCE
T ss_pred hHHHHHHHHhhhc---ccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCC
Confidence 3344555555443 33458999999987644321111 1122467889999999999999999964
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.28 E-value=1.7e-12 Score=115.18 Aligned_cols=73 Identities=23% Similarity=0.227 Sum_probs=51.9
Q ss_pred eeEEEEeecCCCCCh--------------hhHHHHhhcCCCCeEEccccccccccc-hhhHHHHHHhhhhhhc-CCceEE
Q 019979 137 ITFAVAGDLGQTGWT--------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARPWMV 200 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~~~~i~~~~~d~vl~~GDl~~~~~~-~~~~~~~~~~~~~l~~-~~P~~~ 200 (333)
+||+++||+|.+... .++++.+.+.++|+||++||+++.... ......+.+.+..+.. .+|++.
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~~ 80 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEEE
Confidence 589999999975331 123444557899999999999975432 3334455566666654 499999
Q ss_pred ccCCCCCCC
Q 019979 201 TQGNHEKES 209 (333)
Q Consensus 201 ~~GNHD~~~ 209 (333)
++||||...
T Consensus 81 i~GNHD~~~ 89 (333)
T d1ii7a_ 81 IEGNHDRTQ 89 (333)
T ss_dssp ECCTTTCCS
T ss_pred eCCCCcccc
Confidence 999999853
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.10 E-value=3.9e-11 Score=102.00 Aligned_cols=68 Identities=12% Similarity=0.101 Sum_probs=46.7
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhh-----cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIG-----QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~-----~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~ 207 (333)
++|+++||+|.... .+++++.+. ..++|.+|++||+++.+.. -....+.+..+....++++++||||.
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~---~~evi~~l~~l~~~~~v~~v~GNHD~ 74 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY---PKEVIEVIKDLTKKENVKIIRGKYDQ 74 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC---HHHHHHHHHHHHHHSCEEEECCHHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCC---cHHHHHHHHHHhhcCCEEEEeccHHH
Confidence 58999999995422 244555553 2457999999999976542 23344555555545688999999996
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.02 E-value=1.5e-09 Score=87.95 Aligned_cols=62 Identities=18% Similarity=0.240 Sum_probs=41.8
Q ss_pred eeEEEEeecCCCCCh---hhHHHH-hhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGWT---KSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~---~~~~~~-i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
.+++++||+|..... .+.+.+ ++..++|.|+++||++. . ...+.++.+. .|++.+.||||..
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~----~----e~l~~l~~~~--~~v~~V~GN~D~~ 66 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT----K----ESYDYLKTLA--GDVHIVRGDFDEN 66 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS----H----HHHHHHHHHC--SEEEECCCTTCCC
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccc----h----hhHHHHHhhC--CceEEEeCCcCcc
Confidence 489999999965322 133333 44568999999999984 1 1223344333 5789999999973
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.01 E-value=3e-09 Score=87.01 Aligned_cols=60 Identities=13% Similarity=0.230 Sum_probs=41.0
Q ss_pred EEEEeecCCCCCh----hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 139 FAVAGDLGQTGWT----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 139 f~~~gD~~~~~~~----~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
|+++||+|..... ....+.+...++|.|+++||++.. ...+.++.+. .+++.+.||||..
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~~--------~~l~~l~~l~--~~v~~V~GN~D~~ 69 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ--------EYVEMLKNIT--KNVYIVSGDLDSA 69 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH--------HHHHHHHHHC--SCEEECCCTTCCS
T ss_pred EEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCCH--------HHHHHHHhhC--CCEEEEcCCCCcc
Confidence 7899999964322 234444557789999999999841 1223334433 4688999999984
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.00 E-value=6.1e-10 Score=88.88 Aligned_cols=62 Identities=11% Similarity=0.125 Sum_probs=44.6
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
.|++++||+|.... ..++++.+++.++|.|+++||++.. ... +.+.. ...|++.+.||||..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~----~~~----~~l~~--~~~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL----FVI----KEFEN--LNANIIATYGNNDGE 63 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST----HHH----HHGGG--CSSEEEEECCTTCCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH----HHH----HHHhh--cCccEEEEccccccc
Confidence 48999999996532 3567777788899999999999842 111 11222 237999999999973
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.86 E-value=2.3e-08 Score=80.03 Aligned_cols=59 Identities=20% Similarity=0.086 Sum_probs=40.1
Q ss_pred CCeeEEEEeecCCCCCh-hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 135 FPITFAVAGDLGQTGWT-KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~~-~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
...||+++||+|..... +++++.+ ..++|.|+++||+.+..... +. .++..+.||||..
T Consensus 2 ~~~kI~viSD~Hgn~~al~~vl~~~-~~~~D~iih~GD~~~~~~~~------------~~--~~~~~V~GN~D~~ 61 (173)
T d3ck2a1 2 AKQTIIVMSDSHGDSLIVEEVRDRY-VGKVDAVFHNGDSELRPDSP------------LW--EGIRVVKGNMDFY 61 (173)
T ss_dssp CCEEEEEECCCTTCHHHHHHHHHHH-TTTSSEEEECSCCCSCTTCG------------GG--TTEEECCCTTCCS
T ss_pred CCCEEEEEeccCCCHHHHHHHHHHh-hcCCCEEEECCcccCcccch------------hh--cCCeEEecCcccc
Confidence 35799999999954221 2344433 45799999999998643211 11 4788999999973
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.78 E-value=3.6e-08 Score=79.99 Aligned_cols=132 Identities=17% Similarity=0.219 Sum_probs=76.2
Q ss_pred EEEEeecCCCCCh--------------hhHHHHhhc--CCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEcc
Q 019979 139 FAVAGDLGQTGWT--------------KSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQ 202 (333)
Q Consensus 139 f~~~gD~~~~~~~--------------~~~~~~i~~--~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~ 202 (333)
+-++||+|.+... ..+++..++ .+.|.|+++||++......++ +.+.++.|. ...+.+.
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~---~~~~l~~L~--g~~~lI~ 78 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNE---YLRIWKALP--GRKILVM 78 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTS---HHHHHHHSS--SEEEEEC
T ss_pred EEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHH---HHHHHHHCC--CceEEEe
Confidence 4579999975321 234444432 467999999999875432222 334555554 3567899
Q ss_pred CCCCCCCCCCccccccccccccccCcCCCCCCCCceEEEEeCCEEEEEEeccCCCCCCHHHHHHHHHHhhcccCCCCCeE
Q 019979 203 GNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWL 282 (333)
Q Consensus 203 GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~ 282 (333)
||||... .. ....+... ..++ ..+- . .+ -.
T Consensus 79 GNHD~~~-----~~---~~~~~~~~--------~~~~-------~~~~-----------------------~--~g--~~ 108 (188)
T d1xm7a_ 79 GNHDKDK-----ES---LKEYFDEI--------YDFY-------KIIE-----------------------H--KG--KR 108 (188)
T ss_dssp CTTCCCH-----HH---HTTTCSEE--------ESSE-------EEEE-----------------------E--TT--EE
T ss_pred cCCCchh-----hh---hhhchhhH--------HHHH-------HHhh-----------------------h--CC--eE
Confidence 9999731 00 00101000 0000 0010 0 01 27
Q ss_pred EEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccc
Q 019979 283 LVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (333)
Q Consensus 283 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 328 (333)
|+++|.|+....... .......+.....+.+++++|+||+|..
T Consensus 109 i~l~H~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lhGH~H~~ 151 (188)
T d1xm7a_ 109 ILLSHYPAKDPITER---YPDRQEMVREIYFKENCDLLIHGHVHWN 151 (188)
T ss_dssp EEEESSCSSCSSCCS---CHHHHHHHHHHHHHTTCSEEEECCCCCC
T ss_pred EEEEeCCCccccccc---cccchhHHHHHHHhcCceEEEEeeccCC
Confidence 999999986443221 1224467788899999999999999954
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=8.5e-08 Score=85.03 Aligned_cols=183 Identities=18% Similarity=0.177 Sum_probs=91.2
Q ss_pred CeeEEEEeecCCCCC-----------hhhHHHHh----hcCCCC-eEEccccccccccc--hhhHHHHHHhhhhhhcCCc
Q 019979 136 PITFAVAGDLGQTGW-----------TKSTLDHI----GQCKYD-VHLLPGDLSYADYM--QHRWDTFGELVQPLASARP 197 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~-----------~~~~~~~i----~~~~~d-~vl~~GDl~~~~~~--~~~~~~~~~~~~~l~~~~P 197 (333)
.++|+.++|+|..-. ....++.+ ...+++ ++|.+||+...... ........+.+..+. .
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~~~g~~~~~~mn~~g--~- 84 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG--Y- 84 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT--C-
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHHHhCChHHHHHHHhcC--C-
Confidence 478999999984211 01234433 235565 56669999853221 111222333444332 2
Q ss_pred eEEccCCCCCCCCCCccccccccccccccCcC-------CCC-CCCCceEEEEeCCEEE--EEEeccCC-------CC--
Q 019979 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFE-------ESG-SNSNLYYSFDVAGAHL--IMLGSYAD-------YD-- 258 (333)
Q Consensus 198 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~-------~~~-~~~~~~ys~~~g~v~f--i~lds~~~-------~~-- 258 (333)
=..++||||+.... ..+..+......|.- ..+ .....|..++.+++++ |.+-+... ..
T Consensus 85 Da~~~GNHEfd~G~---~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~~~~~~~ 161 (337)
T d1usha2 85 DAMAIGNHEFDNPL---TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTD 161 (337)
T ss_dssp CEEECCGGGGSSCH---HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCCCTT
T ss_pred eEEEechhhhccch---HHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccCcccccC
Confidence 24578999995332 122222222222210 001 1124566788898655 55543210 00
Q ss_pred ----CCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCcccc
Q 019979 259 ----EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (333)
Q Consensus 259 ----~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 328 (333)
...+..+...+.|++. ++...+|+++|.+............ ....+...+...+||+++.||.|..
T Consensus 162 ~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~--~~~~la~~~~~~~vD~IvgGHsH~~ 231 (337)
T d1usha2 162 IEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAP--GDVEMARALPAGSLAMIVGGHSQDP 231 (337)
T ss_dssp EEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCC--CHHHHHHHSCTTSSSEEECCSSCCB
T ss_pred cccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccc--hhHHHHHhCcccCceEEecCccCcc
Confidence 0123333333344433 2566799999998754322111111 1233444444458999999999964
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.47 E-value=3e-07 Score=80.89 Aligned_cols=183 Identities=16% Similarity=0.202 Sum_probs=87.8
Q ss_pred CCCeeEEEEeecCCCCC--------------hhhHHHHh----hcCCCC-eEEccccccccccchhhHHHHHHhhhhhhc
Q 019979 134 QFPITFAVAGDLGQTGW--------------TKSTLDHI----GQCKYD-VHLLPGDLSYADYMQHRWDTFGELVQPLAS 194 (333)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------~~~~~~~i----~~~~~d-~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~ 194 (333)
-+.++|+..+|+|..-. ..+....+ ++.+++ ++|.+||+............-...+-++..
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn 88 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 88 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHHHh
Confidence 46799999999985210 01122222 345676 566799999643321100000112223333
Q ss_pred CCce-EEccCCCCCCCCCCccccccccccccccCcC--------CCC---CCCCceEEEEeC--CEEEEEEeccCCCCC-
Q 019979 195 ARPW-MVTQGNHEKESIPLIMDAFQSYNARWKMPFE--------ESG---SNSNLYYSFDVA--GAHLIMLGSYADYDE- 259 (333)
Q Consensus 195 ~~P~-~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~~--------~~~---~~~~~~ys~~~g--~v~fi~lds~~~~~~- 259 (333)
.+++ ..++||||+......-..+....+.+..|.- ..+ .....|..++.+ ++.++.+........
T Consensus 89 ~lgyDa~t~GNHEfd~g~~~l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~~~~~~~~ 168 (322)
T d3c9fa2 89 KQDYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRF 168 (322)
T ss_dssp TSCCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCCCCC
T ss_pred ccCCcEEeecceecccchHHHHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEeeccccccC
Confidence 4454 6688999995422100111111122222211 001 112445566765 588888765332211
Q ss_pred -------CH-H--HHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC-CCc-EEEecCccc
Q 019979 260 -------YS-D--QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVD-LVLAGHVHA 327 (333)
Q Consensus 260 -------~~-~--q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~-lvl~GH~H~ 327 (333)
.. + +..|.++.++ ++...+|+++|.++.... .........+.+.. +++ ++|.||.|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~-------~~~~~~~~~la~~~~~~~~~iigGHsH~ 237 (322)
T d3c9fa2 169 NSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW-------GEFYQVHQYLRQFFPDTIIQYFGGHSHI 237 (322)
T ss_dssp CTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT-------CHHHHHHHHHHHHCTTSEEEEEECSSCC
T ss_pred CCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc-------cccchHHHHHHHhCCCCCEEEecccccc
Confidence 11 1 1134444433 256779999998753211 11112222333333 344 699999995
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.14 E-value=1.3e-06 Score=69.89 Aligned_cols=70 Identities=17% Similarity=0.138 Sum_probs=46.5
Q ss_pred eeEEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccc-----hhhHHHHHHhhhhhhcCCceEEccCCCCCC
Q 019979 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYM-----QHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~-----~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~ 208 (333)
.||+++||+|.... .+++++.+.+.++|.+|++||+++.+.. ........+.+..+. .|++.+.||||..
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA--HKVIAVRGNCDSE 77 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG--GGEEECCCTTCCH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhcC--CcEEEecCCCCch
Confidence 58999999995422 2456666677899999999999864332 111122223333322 6899999999983
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=98.09 E-value=1.6e-05 Score=68.76 Aligned_cols=169 Identities=16% Similarity=0.103 Sum_probs=87.2
Q ss_pred CeeEEEEeecCCCCC------------------hhhHHHHhhcCCC-CeEEccccccccccchhhH---HHHHHhhhhhh
Q 019979 136 PITFAVAGDLGQTGW------------------TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRW---DTFGELVQPLA 193 (333)
Q Consensus 136 ~~~f~~~gD~~~~~~------------------~~~~~~~i~~~~~-d~vl~~GDl~~~~~~~~~~---~~~~~~~~~l~ 193 (333)
.++|+..+|+|..-. ....++++++.++ -++|-+||+...... ..+ ....+.++.+
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~-~~~~~g~~~~~~~n~~- 79 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY-FNQYRGLADRYFMHRL- 79 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH-HHHHTTHHHHHHHHHT-
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHh-HhhhcchhHHHHHHhc-
Confidence 368899999984311 1235555554444 578899999864321 111 1112233322
Q ss_pred cCCceEEccCCCCCCCCCCccccccccccccccCc---C-------CCCCCCCceEEEEeCCEEEEEEeccCC-------
Q 019979 194 SARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E-------ESGSNSNLYYSFDVAGAHLIMLGSYAD------- 256 (333)
Q Consensus 194 ~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~p~---~-------~~~~~~~~~ys~~~g~v~fi~lds~~~------- 256 (333)
-.=..++||||+..... .+..+.+....|. | .....-..|...+.+++++-++.-...
T Consensus 80 --gyDa~~~GNHEfd~G~~---~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~~~~~ 154 (302)
T d2z1aa2 80 --RYRAMALGNHEFDLGPG---PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISN 154 (302)
T ss_dssp --TCCEEECCGGGGTTCHH---HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSC
T ss_pred --ccccccccchhhhcChh---HHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccccccc
Confidence 23456899999964321 1111111111111 0 000112456678889866655543111
Q ss_pred ----C--CCCHHHHHHHHHHhhcccCCCCCeEEEEeccccccCCCCCCCCChhHHHHHHHHHHhC-CCcEEEecCccccc
Q 019979 257 ----Y--DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (333)
Q Consensus 257 ----~--~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~ 329 (333)
. ....+..++..+.|++ ++..-+|++.|.+.. .=..+.++. ++|++++||.|..-
T Consensus 155 ~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~---------------~d~~la~~~~giD~ii~gh~h~~~ 216 (302)
T d2z1aa2 155 PGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYG---------------EDLKLARRLVGVQVIVGGHSHTLL 216 (302)
T ss_dssp CCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH---------------HHHHHHTTCSSCCEEEECSSCCCB
T ss_pred ccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcc---------------hhhHHHhcCCCeeeeecCccceee
Confidence 0 1113334444444543 245669999998631 112233343 79999999999743
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.92 E-value=6e-05 Score=52.38 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=50.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
.+|..+.+...+.+++.|.|...... ..-.|+|....+......... ...+....++|+||+|++.|.++|
T Consensus 2 daP~~l~v~~~~~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~~V 73 (92)
T d1tdqa2 2 DAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGVGI 73 (92)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEEEE
T ss_pred ccCcCCEEEEecCCEEEEEEEecCCcccceEEEEEEcCCCcceeeEEE--------ecCCCeeEEEECCccCCCEEEEEE
Confidence 36888988888899999999876433 445678876554322211111 133456678999999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 74 ~a 75 (92)
T d1tdqa2 74 SA 75 (92)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.90 E-value=1.3e-05 Score=56.71 Aligned_cols=78 Identities=18% Similarity=0.280 Sum_probs=49.3
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEE----eccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEY----GTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
+..|..+.+.-.+.++++|+|..... .....++| +...+. .... .. ...++|+||+|+|.
T Consensus 3 p~~p~~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~--~~~~-----------~~--~t~~~i~~L~p~t~ 67 (94)
T d1x5aa1 3 SLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEE--WHQM-----------VL--EPRVLLTKLQPDTT 67 (94)
T ss_dssp CCCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSCE--EEEE-----------ES--SSEEEEESCCSSCE
T ss_pred CCCCCceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCce--EEEe-----------ec--cCEEEECCCCCCCE
Confidence 34677777777789999999976432 22223344 333211 0000 11 12467899999999
Q ss_pred EEEEeCc--------CCCeeEEECCC
Q 019979 115 YFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~p 132 (333)
|.+||.. .|+...|+|.|
T Consensus 68 Y~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 68 YIVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 9999963 26778899876
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.88 E-value=4.1e-05 Score=54.55 Aligned_cols=81 Identities=14% Similarity=0.171 Sum_probs=53.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC------CcEEEEeccCCCCCe-eEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS------PSVVEYGTSPGGYNC-GAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
.|..+.+...+++++.|+|....... .-.++|....+.... ... ........+.|.||+|+|.
T Consensus 5 pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~ 74 (104)
T d2b5ib2 5 APISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLL----------TLKQKQEWICLETLTPDTQ 74 (104)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCE----------EECSCCCEEEECSCCTTCE
T ss_pred CCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeEE----------ecCCCcEEEEECCCCCCCE
Confidence 79999999999999999998764321 124666655433211 111 1122344568899999999
Q ss_pred EEEEeCc------------CCCeeEEECCC
Q 019979 115 YFYRCGR------------QGPEFEFKTPP 132 (333)
Q Consensus 115 Y~Y~v~~------------~s~~~~F~t~p 132 (333)
|.+||.. +|+...|+|.|
T Consensus 75 Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 75 YEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp EEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 9999863 14567888876
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=2.9e-05 Score=54.54 Aligned_cols=80 Identities=18% Similarity=0.277 Sum_probs=49.0
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----C-cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----P-SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~-~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
.|..+.+.-.+.+++.|.|....... . -.++|.............. .. ....+|+||+|++.|.
T Consensus 3 ~P~~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~---------~~--~~~~~v~~L~p~t~Y~ 71 (96)
T d1x5xa1 3 MPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD---------GE--DLAYTVKNLRRSTKYK 71 (96)
T ss_dssp CCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE---------ES--CSEEEEESCCSSCEEE
T ss_pred cCCCCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeec---------CC--CCEEEECCCCCCCEEE
Confidence 46666777778999999998643221 1 1444444333222211111 11 1245788999999999
Q ss_pred EEeCc--------CCCeeEEECCC
Q 019979 117 YRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p 132 (333)
|||.. .|+...|+|.|
T Consensus 72 ~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 72 FKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEcCCcEeCCCCCEEEEeCc
Confidence 99863 25677888877
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.86 E-value=1.9e-05 Score=55.38 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=49.2
Q ss_pred CceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 43 PQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 43 p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
|..+.|...+.+++.|.|....... .-.|+|....+.......+. ....+|+||+|++.|.||
T Consensus 4 P~~~~v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~ 70 (93)
T d1x4xa1 4 CKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGP-------------GLSYEIKGLSPATTYYCR 70 (93)
T ss_dssp CCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEES-------------CSEEEEESCCSSCEEEEE
T ss_pred CCCCEEEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcceEeecCC-------------ccEEEEcccceeeEEEEE
Confidence 3334455556899999998543322 23566766554433222211 123568899999999999
Q ss_pred eCc--------CCCeeEEECCCC
Q 019979 119 CGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 119 v~~--------~s~~~~F~t~p~ 133 (333)
|.. .|+...|+|+|+
T Consensus 71 V~A~n~~G~s~~S~~~~~~Tpps 93 (93)
T d1x4xa1 71 VQALSVVGAGPFSEVVACVTPPS 93 (93)
T ss_dssp EEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEECCcCcCCCCcEEEEeCCC
Confidence 853 256788999873
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.81 E-value=0.00015 Score=52.06 Aligned_cols=82 Identities=22% Similarity=0.260 Sum_probs=53.9
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-C----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-S----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
..|..+.+...+.++++|.|.-.... . .-.|.|....+....... ........++|++|+|++.|
T Consensus 12 ~~P~~l~~~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~L~p~t~Y 81 (107)
T d1x5fa1 12 SAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN----------TSHPGEMQVTIQNLMPATVY 81 (107)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE----------CSSTTCSEEEECSCCTTCEE
T ss_pred cCCCccEEEEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEE----------EeCCCccEEEecCCCCCCEE
Confidence 37888988888899999999854211 1 236667665443222211 12223456889999999999
Q ss_pred EEEeCc--------CCCeeEEECCC
Q 019979 116 FYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p 132 (333)
.+||.. .|....++|.|
T Consensus 82 ~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 82 IFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEeCCCCcCCCCCEEEECCC
Confidence 999864 14566777765
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.81 E-value=0.00012 Score=52.63 Aligned_cols=87 Identities=22% Similarity=0.311 Sum_probs=53.2
Q ss_pred CCCCCCceEEEEec--CCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 38 KPSSHPQQVHISLA--GDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 38 ~~~~~p~~v~l~~~--~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
.++..|..+.+... +.+++.|+|.-...... -.+.|....+.......-. ...+.....+|.||+|
T Consensus 10 ~P~~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p 81 (111)
T d1x5ka1 10 VPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE--------PVVGNRLTHQIQELTL 81 (111)
T ss_dssp CCCSCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEE--------EESTTCSEEEECSCCS
T ss_pred CCCCCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEE--------EeCCCeeEEEECCCCC
Confidence 44567888887654 37799999986543222 2556665443221110000 1122334567899999
Q ss_pred CCEEEEEeCc--------CCCeeEEECCC
Q 019979 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p 132 (333)
++.|.+||.. .|+...|+|+.
T Consensus 82 ~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 82 DTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp SSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred CCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 9999999863 25677888865
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.76 E-value=0.00014 Score=50.68 Aligned_cols=79 Identities=15% Similarity=0.241 Sum_probs=51.7
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+.-.+.+++.|.|....... .-.|+|+...+....... ........+|+||+|++.|.+
T Consensus 3 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 71 (93)
T d2vkwa2 3 APKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIR-----------LPSGSDHVMLKSLDWNAEYEV 71 (93)
T ss_dssp CCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEE-----------ECTTCCEEEECSCCTTCEEEE
T ss_pred CCccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeeee-----------ccCCceEEEEeccccceEEEE
Confidence 57777777667999999999865432 236777776543221110 122234578899999999999
Q ss_pred EeCcC-----C--CeeEEECC
Q 019979 118 RCGRQ-----G--PEFEFKTP 131 (333)
Q Consensus 118 ~v~~~-----s--~~~~F~t~ 131 (333)
||... | ....|+|.
T Consensus 72 ~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 72 YVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EEEEEETTEECCCEEEEEECC
T ss_pred EEEEEcCCCCcCCEeEEEEec
Confidence 99641 2 24667774
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.72 E-value=0.0001 Score=51.25 Aligned_cols=80 Identities=14% Similarity=0.128 Sum_probs=53.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
.+|..+.+...+.+++.|+|.-.... ..-.|+|............ .......+.|++|+|++.|.+||
T Consensus 3 ~aP~n~~~~~~s~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~V 71 (92)
T d1qg3a1 3 GAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHL-----------LDSKVPSVELTNLYPYCDYEMKV 71 (92)
T ss_dssp CCCEEEEEEECSTTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEE-----------EEESSSEEEECSCCTTCEEEEEE
T ss_pred CcCCCCEEEEccCCEEEEEEEecCCCccceEEeeeeccccccEEEE-----------ecCCccEEEECCCCCCcEEEEEE
Confidence 46888888888899999999876422 3346777766543221111 11123357789999999999998
Q ss_pred Cc--------CCCeeEEECC
Q 019979 120 GR--------QGPEFEFKTP 131 (333)
Q Consensus 120 ~~--------~s~~~~F~t~ 131 (333)
.. .|+...++|+
T Consensus 72 ~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 72 CAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp EEECSSCBCCCCCCEEEECC
T ss_pred EEEeCCcCcCCCCCEEEEcC
Confidence 63 2456667764
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.71 E-value=6.4e-05 Score=52.61 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=50.7
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCCcE----EEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESSPSV----VEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+++...+.++++|.|.-........ |+|.............. .....++|.||+|++.|.+
T Consensus 3 ~~~~l~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~ 71 (95)
T d2djsa1 3 TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVYVV 71 (95)
T ss_dssp CCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEEEE
T ss_pred CCCccEEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeec-----------CCccEEEEeecCCccEEEE
Confidence 35567777778999999998654433333 44444433222111100 1123567899999999999
Q ss_pred EeCc--------CCCeeEEECCC
Q 019979 118 RCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 118 ~v~~--------~s~~~~F~t~p 132 (333)
||.. .|+...|+|.|
T Consensus 72 ~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 72 QVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp EEEEEESSCEEEECCCEEEECCC
T ss_pred EEEEEcCCCCCCCCCCEEEEeCC
Confidence 9964 26677888876
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.71 E-value=6e-05 Score=53.35 Aligned_cols=79 Identities=11% Similarity=0.199 Sum_probs=51.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+.-.+.+++.|.|....... .-.|+|...++....... ........+|+||+|++.|.+
T Consensus 6 ~p~~~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 74 (98)
T d1x5la1 6 QVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----------LKAVTTRATVSGLKPGTRYVF 74 (98)
T ss_dssp CCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----------EEESSSEEEECSCCTTCEEEE
T ss_pred CCCceEEEeccCCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEE-----------ecCCceEEEECCCCCCCEEEE
Confidence 67777777677999999998654322 235777765543222111 011223667899999999999
Q ss_pred EeCc--------CCCeeEEECC
Q 019979 118 RCGR--------QGPEFEFKTP 131 (333)
Q Consensus 118 ~v~~--------~s~~~~F~t~ 131 (333)
||.. +|+...|+|.
T Consensus 75 ~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 75 QVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp CEEEEETTEECCCCCCEEEECC
T ss_pred EEEEEcCCCCcCCCCCEEEEcC
Confidence 9953 3667788884
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.68 E-value=7.9e-05 Score=52.26 Aligned_cols=72 Identities=15% Similarity=0.233 Sum_probs=46.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
..|..+.+...+.+++.|.|....... .-.|+|+..+......... ..........|+||+|+|.|
T Consensus 8 ~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~p~t~Y 78 (95)
T d2ibga1 8 PVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT---------IEGAHARSFKIAPLETATMY 78 (95)
T ss_dssp CCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE---------EECTTCCEEEECSCCTTCEE
T ss_pred CCCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeee---------ccCCceeEEEEeeccCCeEE
Confidence 357777777667899999998543221 1267887655432211110 12233456789999999999
Q ss_pred EEEeCc
Q 019979 116 FYRCGR 121 (333)
Q Consensus 116 ~Y~v~~ 121 (333)
.+||..
T Consensus 79 ~~~V~A 84 (95)
T d2ibga1 79 EFKLQS 84 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.61 E-value=0.00014 Score=50.25 Aligned_cols=71 Identities=11% Similarity=0.079 Sum_probs=48.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+.++-.+.+++.|+|.-.... ..-.|+|+...+....... ..++....+.|+||+|++.|.++|
T Consensus 2 d~P~~l~v~~vt~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~~----------~v~~~~~~~~i~~L~p~t~Y~~~V 71 (89)
T d1fnfa3 2 DSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----------RVPHSRNSITLTNLTPGTEYVVSI 71 (89)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE----------EEETTCCEEEEESCCTTCEEEEEE
T ss_pred ccCcCCEEEEecCCEEEEEEEeCCCEEeeEEEEEEECCCCCceEEE----------EECCCccEEEECCCcccCEEEEEE
Confidence 36888988877899999999876433 3346888776543221110 012234467889999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 72 ~a 73 (89)
T d1fnfa3 72 VA 73 (89)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.60 E-value=0.00016 Score=52.07 Aligned_cols=73 Identities=22% Similarity=0.212 Sum_probs=45.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+.+.-.+.+++.|.|.-....+ .-.|+|.............. .........+|+||+|++.|.
T Consensus 12 ~~P~~~~v~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~v~~L~p~t~Y~ 83 (108)
T d1x4za1 12 EAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--------AIPPSRLSVEITGLEKGISYK 83 (108)
T ss_dssp CCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--------EECTTCCEEEEESCCTTCEEE
T ss_pred ccCCCCEEEEccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEE--------eecCCccEEEECCCCCCCEEE
Confidence 467777788778999999995332212 23567766543322221111 112233456789999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
|||..
T Consensus 84 frV~A 88 (108)
T d1x4za1 84 FRVRA 88 (108)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.59 E-value=0.00014 Score=51.64 Aligned_cols=80 Identities=13% Similarity=0.282 Sum_probs=50.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
..|..+.+.-.+.+++.|+|...... ..-.|+|............ .... ...+|+||+|++.|.+|
T Consensus 12 ~~P~~~~~~~~~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~----------~~~~--~~~~i~~L~p~t~Y~~~ 79 (102)
T d1x5za1 12 GQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----------IEPG--TSYRLQGLKPNSLYYFR 79 (102)
T ss_dssp CCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----------ECSS--SEEEEECCCTTCEEEEC
T ss_pred cCCCCeEEEEccCCEEEEEEECCCCCCccceEEEEEeCCCCceEEEE----------cCCc--CEEEECCCCCCCEEEEE
Confidence 46888988877799999999865321 2235566654432211111 0111 13578999999999999
Q ss_pred eCc--------CCCeeEEECCC
Q 019979 119 CGR--------QGPEFEFKTPP 132 (333)
Q Consensus 119 v~~--------~s~~~~F~t~p 132 (333)
|.. .|+...++|..
T Consensus 80 V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 80 LAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp EEEECSSCEEEECCCEEEECCC
T ss_pred EEEEcCCCEeCCCCCEEEEcCC
Confidence 853 14566777754
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=97.59 E-value=0.00029 Score=48.58 Aligned_cols=66 Identities=18% Similarity=0.350 Sum_probs=43.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
..|..+.+...+.+++.|+|.-.. .......|....+. ..... ... -..++.||+||+.|.|+|.
T Consensus 5 ~~P~~l~~~~~~~~sv~lsW~~p~-~~~~i~~Y~i~~~~-~~~~~-----------~~~--t~~~~~~L~p~t~Y~~~V~ 69 (88)
T d1k85a_ 5 TAPTNLASTAQTTSSITLSWTAST-DNVGVTGYDVYNGT-ALATT-----------VTG--TTATISGLAADTSYTFTVK 69 (88)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCS-CCSSEEEEEEEESS-SEEEE-----------ESS--SEEEECCCCSSCEEEEEEE
T ss_pred CCCCCcEEEEecCCEEEEEEeCCC-CCCCEEEEEEEccc-eEEEe-----------cCC--CEEEECCCCCCCEEEEEEE
Confidence 478889888778999999997553 23345666553221 11110 111 1357899999999999986
Q ss_pred c
Q 019979 121 R 121 (333)
Q Consensus 121 ~ 121 (333)
.
T Consensus 70 A 70 (88)
T d1k85a_ 70 A 70 (88)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.59 E-value=6.9e-05 Score=53.13 Aligned_cols=80 Identities=14% Similarity=0.171 Sum_probs=49.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeE--EeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGA--EGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
+...+|..+++.-.+.++++|.|...... ....|+|........... ....... ...+......|.||+|++.
T Consensus 2 g~Pp~~~~l~v~~~t~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~L~p~t~ 77 (101)
T d2cuia1 2 GSRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQREL----MVPGTRHSAVLRDLRSGTL 77 (101)
T ss_dssp CCCCCCCCCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEE----EEETTCCEEEECSCCTTCE
T ss_pred CCccCCCCcEEEEECCCEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEe----ecccceeEEEeCCCCcCCE
Confidence 34457888988888899999999654322 334777776543221111 1111111 1223345567899999999
Q ss_pred EEEEeCc
Q 019979 115 YFYRCGR 121 (333)
Q Consensus 115 Y~Y~v~~ 121 (333)
|.++|..
T Consensus 78 Y~~~V~a 84 (101)
T d2cuia1 78 YSLTLYG 84 (101)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.58 E-value=0.00027 Score=49.21 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=48.7
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
.+|..+.+...+.++++|+|.-.... ..-.|+|....+...... . ........++|+||+||++|.++|
T Consensus 5 ~~P~~l~v~~v~~~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~~------~----~~~~~~~~~~i~~L~p~t~Y~v~V 74 (93)
T d1tdqa1 5 DGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTT------F----RLQPPLSQYSVQALRPGSRYEVSI 74 (93)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCEE------E----EECTTCSEEEECSCCTTCEEEEEE
T ss_pred CcCCCCEEEEeCCCEEEEEEEccccCCCceEEEEEeccCcceeeE------E----EeCCCceEEEEeCcccceEEEEEE
Confidence 57899999988899999999865433 334777776654322110 0 122223456899999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 75 ~a 76 (93)
T d1tdqa1 75 SA 76 (93)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.58 E-value=0.00026 Score=50.01 Aligned_cols=83 Identities=12% Similarity=0.140 Sum_probs=52.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC------CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
.+|..+.+.....++++|.|...... ..-.|+|...++.......-. ...+.....+|.+|+|++.
T Consensus 3 ~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~ 74 (101)
T d1x4ya1 3 AGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--------MVEGDRYWHSISHLQPETS 74 (101)
T ss_dssp SCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--------EEETTCCEEEECSCCTTCE
T ss_pred CCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEE--------EEcCCeeEEEEcCCCCCCE
Confidence 57999999888899999999864221 122577776554322111100 0112233457899999999
Q ss_pred EEEEeCc--------CCCeeEEECC
Q 019979 115 YFYRCGR--------QGPEFEFKTP 131 (333)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~ 131 (333)
|.+||.. .|+...++|.
T Consensus 75 Y~~~v~a~n~~G~s~~S~~~~~~T~ 99 (101)
T d1x4ya1 75 YDIKMQCFNEGGESEFSNVMICETK 99 (101)
T ss_dssp EEEEEEEECTTCCCCCCCCEEEECC
T ss_pred EEEEEEEEcCCCCCCCCCcEEEEcc
Confidence 9999863 2566777774
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.57 E-value=0.00026 Score=48.87 Aligned_cols=71 Identities=18% Similarity=0.179 Sum_probs=48.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+++.-.+.+++.|.|.-.... ..-.|+|....+....... ...+....++|.||+||+.|.++|
T Consensus 3 d~P~~l~v~~~s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 72 (90)
T d1tena_ 3 DAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTI----------DLTEDENQYSIGNLKPDTEYEVSL 72 (90)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEE----------EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCCcEEEEecCCEEEEEEEeCceEeccEEEEEEEcCCCceeEEE----------EecCCcceeeEeeecCCCEEEEEE
Confidence 36889999877899999999865433 3447788765543221110 012233467899999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 73 ~a 74 (90)
T d1tena_ 73 IS 74 (90)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.56 E-value=0.00021 Score=50.68 Aligned_cols=83 Identities=17% Similarity=0.097 Sum_probs=49.1
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
.|.-..+ -...++++|.|.-..... .-.|+|+...+......... . ........++|+||+|++.|.
T Consensus 5 ~P~~~~~-~~~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~i~~L~p~t~Y~ 76 (101)
T d2haza1 5 SPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD-----A--KEASMEGIVTIVGLKPETTYA 76 (101)
T ss_dssp CCEEEEE-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEE-----H--HHHHHHSEEEECSCCTTCEEE
T ss_pred CCccCEE-EeeCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeee-----e--ecccceeEEEecCCCCCeEEE
Confidence 5643333 345789999999753322 23567776554322111100 0 011122357899999999999
Q ss_pred EEeCc--------CCCeeEEECCC
Q 019979 117 YRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p 132 (333)
|||.. .|+...|+|.|
T Consensus 77 frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 77 VRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEeCCcCcCCCCceeEEeCC
Confidence 99963 25677888876
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.55 E-value=0.0002 Score=49.40 Aligned_cols=69 Identities=17% Similarity=0.178 Sum_probs=47.7
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
.|..+.+.-.+++++.|.|...... ..-.|+|....+....... .......+.|+||+||+.|.++|.
T Consensus 3 ~P~~l~v~~v~~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~V~ 71 (88)
T d1qr4a2 3 SPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----------VDGSKTRTKLVKLVPGVDYNVNII 71 (88)
T ss_dssp CCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----------EETTCCEEEECSCCSSCEEEEEEE
T ss_pred CCcceEEEEecCCEEEEEEEcccEeeceEEEEEEeccCCceEEEE-----------ecCCccEEEECCCCCCCEEEEEEE
Confidence 5888888888899999999865332 3447778776543222111 112234678999999999999986
Q ss_pred c
Q 019979 121 R 121 (333)
Q Consensus 121 ~ 121 (333)
.
T Consensus 72 a 72 (88)
T d1qr4a2 72 S 72 (88)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.50 E-value=0.00014 Score=51.06 Aligned_cols=80 Identities=16% Similarity=0.202 Sum_probs=51.5
Q ss_pred CCceEEEEecC--CCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAG--DSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~--~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|.++.++..+ .+++.|+|..... ...-.|+|....+...... . ..++-...++|+||+||+.|.+
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~------~----~v~~~~~~~~l~gL~P~t~Y~v 71 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE------A----TIPGHLNSYTIKGLKPGVVYEG 71 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEE------E----EECSSCCEEEECSCCSSEEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceeee------e----ccCCCccEEEECCcccCcEEEE
Confidence 58888887665 5899999997632 1334777876554322110 0 1234455679999999999999
Q ss_pred EeCc-----CC--CeeEEECC
Q 019979 118 RCGR-----QG--PEFEFKTP 131 (333)
Q Consensus 118 ~v~~-----~s--~~~~F~t~ 131 (333)
+|.. .+ ....|+|.
T Consensus 72 ~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 72 QLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp EEEEEESSSCEEEEEEEEEEC
T ss_pred EEEEEeCCCccCcEEEEEEec
Confidence 9853 12 24667764
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.49 E-value=0.00034 Score=49.90 Aligned_cols=78 Identities=15% Similarity=0.179 Sum_probs=49.9
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
+++..|..+.+...+.+++.|.|....... .-.|+|.............. .. .........+|++|+|
T Consensus 7 ~P~~pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~i~~L~p 80 (109)
T d1va9a1 7 APDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV----EM--KATGDSEVYTLDNLKK 80 (109)
T ss_dssp CCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC----BC--CCCSSEEEEEEESCCS
T ss_pred CCCCCCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeee----EE--ecCCCeeEEEECCCCc
Confidence 455678999988888999999999643211 12566766543221110000 00 1234456788999999
Q ss_pred CCEEEEEeCc
Q 019979 112 DTVYFYRCGR 121 (333)
Q Consensus 112 ~t~Y~Y~v~~ 121 (333)
++.|.+||..
T Consensus 81 ~t~Y~~~V~a 90 (109)
T d1va9a1 81 FAQYGVVVQA 90 (109)
T ss_dssp SCCEEEEEEE
T ss_pred ceEEEEEEEE
Confidence 9999999864
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.48 E-value=0.00023 Score=48.76 Aligned_cols=68 Identities=10% Similarity=0.204 Sum_probs=47.5
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
.|..+.++..+.+++.|.|...... ..-.|+|....+...... ..+....+.|+||+||+.|.++|.
T Consensus 3 ~P~nl~v~~~~~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~~~~L~p~t~Y~v~V~ 70 (86)
T d1tdqa3 3 SPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGISSEVT------------VPRDRTSYTLTDLEPGAEYIISIT 70 (86)
T ss_dssp CCEEEEEEEECSSCEEEEEECCCSCCSEEEEEEECSSSCCEEEE------------EESSCSEEEECCCCTTCCEEEEEE
T ss_pred cCCCCEEEEecCCEEEEEEeCCCCCccceEEEEecccccceEEE------------eCCCccEEEECCCccccEEEEEEE
Confidence 5888988888899999999876433 344788876553221110 112233678999999999999986
Q ss_pred c
Q 019979 121 R 121 (333)
Q Consensus 121 ~ 121 (333)
.
T Consensus 71 a 71 (86)
T d1tdqa3 71 A 71 (86)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.48 E-value=0.00019 Score=50.66 Aligned_cols=72 Identities=17% Similarity=0.197 Sum_probs=46.9
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
...|..+.+.-.+.++++|.|.-.... ..-.|+|...++..+..+. . ........+|+||+||+.
T Consensus 2 P~~P~~~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~-~---------~~~~~~~~~v~~L~~~~~ 71 (98)
T d1x5ya1 2 TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN-K---------EPVERCGFTVKDLPTGAR 71 (98)
T ss_dssp CCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS-S---------SCBSSSEEEEECCCTTCC
T ss_pred CCCCcCcEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEee-e---------ecCceeEEEECCCcCCeE
Confidence 347888988877899999999853221 2246777766543322111 0 111223567889999999
Q ss_pred EEEEeCc
Q 019979 115 YFYRCGR 121 (333)
Q Consensus 115 Y~Y~v~~ 121 (333)
|.|||..
T Consensus 72 Y~frV~A 78 (98)
T d1x5ya1 72 ILFRVVG 78 (98)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999974
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.46 E-value=0.00018 Score=49.49 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=47.4
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
+|..+++...+.+++.|.|...... ..-.|+|.......... .........+|+||+||+.|.++|.
T Consensus 2 aP~~l~v~~~t~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~~~~------------~~~~~~~~~~~~~L~p~t~Y~v~V~ 69 (87)
T d1qr4a1 2 NPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKKNEM------------EIPVDSTSFILRGLDAGTEYTISLV 69 (87)
T ss_dssp CCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECTTCCEEEE------------EECTTCSEEEEESCCSSCEEEEEEE
T ss_pred cCcCcEEEEecCCEEEEEEECCCCCcceeEEEeecCCcceeEE------------eCCCCcCEEEECCCCcCCEEEEEEE
Confidence 6889999888899999999976433 34477787654321100 1122334678999999999999986
Q ss_pred c
Q 019979 121 R 121 (333)
Q Consensus 121 ~ 121 (333)
.
T Consensus 70 a 70 (87)
T d1qr4a1 70 A 70 (87)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=0.00019 Score=50.51 Aligned_cols=70 Identities=16% Similarity=0.214 Sum_probs=43.9
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
..|..|.+.-.+.+++.|+|....... .-.|+|...+........ .......++|.||+|+
T Consensus 3 ~pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~ 71 (100)
T d1x5ja1 3 MPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----------ANATTLSYLVTGLKPN 71 (100)
T ss_dssp CCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEE-----------CCBCSSEEEEESCCTT
T ss_pred CCCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEe-----------cCCCccEEEECCCCCC
Confidence 468889888888999999998542111 124555554432221111 1111224678999999
Q ss_pred CEEEEEeCc
Q 019979 113 TVYFYRCGR 121 (333)
Q Consensus 113 t~Y~Y~v~~ 121 (333)
|.|.+||..
T Consensus 72 t~Y~~~V~a 80 (100)
T d1x5ja1 72 TLYEFSVMV 80 (100)
T ss_dssp CEECCEEEE
T ss_pred CEEEEEEEE
Confidence 999999863
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00034 Score=49.30 Aligned_cols=72 Identities=10% Similarity=0.043 Sum_probs=39.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCC-------cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESSP-------SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~~-------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
.|..|.+...+++++.|.|........ -.|+|+...+......... ........+.|.+|+|++.
T Consensus 4 ~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~ 75 (101)
T d1iarb2 4 APGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNV--------TYLEPSLRIAASTLKSGIS 75 (101)
T ss_dssp CCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEE--------CSSCCEEEECC-----CCC
T ss_pred cCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeee--------ccCccceEEEECCCCCCCE
Confidence 688888877778999999997643221 2577776654333221111 1233445678999999999
Q ss_pred EEEEeCc
Q 019979 115 YFYRCGR 121 (333)
Q Consensus 115 Y~Y~v~~ 121 (333)
|.+||..
T Consensus 76 Y~~rVrA 82 (101)
T d1iarb2 76 YRARVRA 82 (101)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.44 E-value=0.00026 Score=50.26 Aligned_cols=77 Identities=18% Similarity=0.201 Sum_probs=49.4
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+...+.+++.|+|....... .-.|+|...+.......... .....|+||+|++.|.+
T Consensus 13 ~P~~l~v~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~ 79 (103)
T d1x5ga1 13 PAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTEYSF 79 (103)
T ss_dssp CCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCEEEE
T ss_pred cCCCcEEEEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEecc-------------ccEEecCCCCCCCEEEE
Confidence 67788888777999999998543221 22567776554322222111 12457899999999999
Q ss_pred EeCc--------CCCeeEEECC
Q 019979 118 RCGR--------QGPEFEFKTP 131 (333)
Q Consensus 118 ~v~~--------~s~~~~F~t~ 131 (333)
+|.. .|+...++|.
T Consensus 80 ~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 80 RVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEEECSSCCCCBCCCCCEECC
T ss_pred EEEEEcCCcCcCCCCCEEEEcC
Confidence 9853 1345556664
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.43 E-value=0.00041 Score=47.76 Aligned_cols=70 Identities=10% Similarity=0.062 Sum_probs=46.7
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
.|..+.+...+.+++.|.|...... ....++|............ . ...-....+|+||+||+.|.+||.
T Consensus 2 pP~~l~~~~v~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~-~---------~~~~~~~~~i~~L~p~t~Y~~~V~ 71 (90)
T d1fnha1 2 APTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI-N---------LAPDSSSVVVSGLMVATKYEVSVY 71 (90)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSCSCCCEE-E---------ECTTCCEEEECSCCTTCEEEEEEE
T ss_pred CCCCEEEEEecCCEEEEEEEccceeccceEEEEEeeeCCCceEEE-E---------eCCCCeEEEEecccCceEEEEEEE
Confidence 4788888888899999999876433 3446777665432211110 0 112223578999999999999996
Q ss_pred c
Q 019979 121 R 121 (333)
Q Consensus 121 ~ 121 (333)
.
T Consensus 72 a 72 (90)
T d1fnha1 72 A 72 (90)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.43 E-value=0.00026 Score=50.18 Aligned_cols=79 Identities=11% Similarity=0.067 Sum_probs=51.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
+|..+++...+.+++.|.|...... ..-.|+|....+...... ..+-.....|+||+||+.|.++|.
T Consensus 3 ~P~~l~~~~~t~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~l~~L~p~t~Y~~~V~ 70 (102)
T d2cuha1 3 GPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPLQAE------------TPGSAVDYPLHDLVLHTNYTATVR 70 (102)
T ss_dssp SCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSCCEEEE------------EETTCSEEEECSCCSSSEEEEEEE
T ss_pred CCCccEEEEeCCCEEEEEEEeeeccceeeEEEEEeccccceeee------------eeeeeeeEEEccEEeeEEEEEEEE
Confidence 6888888777799999999875432 345677765543211110 112233578999999999999986
Q ss_pred cC-----C--CeeEEECCC
Q 019979 121 RQ-----G--PEFEFKTPP 132 (333)
Q Consensus 121 ~~-----s--~~~~F~t~p 132 (333)
.- | ....|+|.+
T Consensus 71 a~~~~~~s~~~~~~~~T~~ 89 (102)
T d2cuha1 71 GLRGPNLTSPASITFTTGL 89 (102)
T ss_dssp EEETTEECCCEEEEEESCC
T ss_pred EEeCCCCcCCEEEEEECCC
Confidence 31 2 245678765
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=0.00043 Score=47.72 Aligned_cols=70 Identities=20% Similarity=0.248 Sum_probs=47.2
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
.|..+++.-.+.+++.|.|...... ..-.|+|....+....... ...+....+.|+||+|++.|.++|
T Consensus 3 pP~~l~~~~~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 72 (91)
T d1fnfa2 3 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL----------SISPSDNAVVLTNLLPGTEYVVSV 72 (91)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEEE----------EECTTCCEEEECSCCTTCEEEEEE
T ss_pred cCCceEEEEeCCCEEEEEEEecCCCCcceeEEEEEECCCCccEEEE----------EeCCCceEEEEeceeCCCEEEEEE
Confidence 4888888877799999999865322 2346788766543221110 122334467899999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 73 ~a 74 (91)
T d1fnfa2 73 SS 74 (91)
T ss_dssp EE
T ss_pred EE
Confidence 63
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=0.00014 Score=53.58 Aligned_cols=91 Identities=18% Similarity=0.211 Sum_probs=55.1
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCCC------CCcEEEEeccCCCCC---eeEEeeEEEEeeeeeecCeEEEEEeC
Q 019979 37 PKPSSHPQQVHISLAGDSHMRVTWITDDES------SPSVVEYGTSPGGYN---CGAEGESTSYRYLFYRSGKIHHTVIG 107 (333)
Q Consensus 37 ~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~ 107 (333)
.++...|..|.+...+.++++|.|...... ....+.|........ ....... . ...+....++|.
T Consensus 12 ~~P~~~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~i~ 85 (125)
T d1uena_ 12 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKI--L----TFQGSKTHGMLP 85 (125)
T ss_dssp CCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEE--E----EEESSCSEEEEE
T ss_pred cCCCCCCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceE--E----EeCCCccEEEEC
Confidence 345567899988877899999999754211 112344443322111 1111110 0 112334468899
Q ss_pred CCCCCCEEEEEeCc--------CCCeeEEECCCC
Q 019979 108 PLEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 108 ~L~p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
+|+|+|.|.+||.. .|+...|+|++.
T Consensus 86 ~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 86 GLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 99999999999863 256788999763
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=0.00043 Score=47.75 Aligned_cols=70 Identities=17% Similarity=0.191 Sum_probs=47.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+++.-.+.++++|.|.-.... ..-.|+|....+...... ..........|+||+||+.|.++|
T Consensus 3 spP~~l~v~~~~~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~~V 71 (90)
T d1fnha2 3 SPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQR-----------TIKPDVRSYTITGLQPGTDYKIYL 71 (90)
T ss_dssp CCCEEEEEEEECSSEEEEEEECCSSCCCCEEEEEEESSSSCCEEE-----------ECCTTCSEEEEESCCTTCEEEEEE
T ss_pred CcCCCCEEEEecCCEEEEEEECCCCCCceeEEEEEEccCCceEEE-----------ecCCCccEEEeCCCCCCcEEEEEE
Confidence 35888999888899999999854333 344677776544322111 112233456889999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 72 ~a 73 (90)
T d1fnha2 72 YT 73 (90)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.40 E-value=0.00049 Score=48.93 Aligned_cols=69 Identities=9% Similarity=0.031 Sum_probs=40.1
Q ss_pred CceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 43 PQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 43 p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
|..+.+.-.+.+++.|.|.-..... .-.|+|+...+......... ..+.....+|.||+||+.|.+|
T Consensus 10 P~~p~~~~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~fr 80 (105)
T d2d9qb2 10 DPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP---------LPLEALQYELCGLLPATAYTLQ 80 (105)
T ss_dssp CC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE---------ECSCEEEEEECSCCSCCCEEEE
T ss_pred CCCCEeecCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeec---------ccCCcceeEEecccCCeEEEEE
Confidence 3344455556889999998653222 23677776554332221111 2344566789999999999999
Q ss_pred eC
Q 019979 119 CG 120 (333)
Q Consensus 119 v~ 120 (333)
|.
T Consensus 81 Vr 82 (105)
T d2d9qb2 81 IR 82 (105)
T ss_dssp EE
T ss_pred EE
Confidence 85
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.36 E-value=5.3e-05 Score=61.98 Aligned_cols=63 Identities=29% Similarity=0.304 Sum_probs=43.0
Q ss_pred eEEEEeecCCCCC-hhhHHHHhh-cCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCC
Q 019979 138 TFAVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (333)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~-~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~ 207 (333)
|+.++||+|.... ..++++.+. ....|.++++||+++.+.... +.++-+ ...-+..+.||||.
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~s~------~vl~~l-~~~~~~~i~GNHE~ 78 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV------ECLELI-TFPWFRAVRGNHEQ 78 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH------HHHGGG-GSTTEEECCCHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccccCccHH------HHHHHh-hccccccccCcHHH
Confidence 7889999986532 245666665 356689999999998665321 122222 23457889999996
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=0.00039 Score=48.26 Aligned_cols=69 Identities=16% Similarity=0.166 Sum_probs=46.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
..|..+.+.-.+.+++.|+|...... ..-.|+|....+... . . ..........|+||+||+.|.++|
T Consensus 3 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~-~-------~----~~~~~~~~~~i~~L~p~t~Y~~~V 70 (93)
T d2cuma1 3 EAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQTQ-E-------I----LLPGGITSHQLLGLFPSTSYNARL 70 (93)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTSCEE-E-------E----EECSSCSEEEECSCCTTCEEEEEE
T ss_pred CcCCCCEEEEeCCCEEEEEEEccccccccEEEEEEccccccE-E-------E----EECCCccEEEEeCccCCCEEEEEE
Confidence 36888888877799999999876433 445777876543211 0 0 012233457899999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 71 ~a 72 (93)
T d2cuma1 71 QA 72 (93)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.32 E-value=0.00094 Score=48.06 Aligned_cols=83 Identities=19% Similarity=0.240 Sum_probs=52.4
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCC
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 110 (333)
..|..|+++. ..+++.|+|....... .-.|+|+........... . ........+.+.+|.
T Consensus 7 ~pP~nl~v~~-~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~L~ 76 (114)
T d2gysa2 7 PEPRDLQIST-DQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAI-L--------LSNTSQATLGPEHLM 76 (114)
T ss_dssp CCCEEEEEEE-ETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEE-E--------EESSSEEEECTTTCC
T ss_pred CcCCCeEEEE-eCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEE-e--------eccCceEEEEeCCCC
Confidence 3788898863 4678999998764221 124666665543222111 1 122234467889999
Q ss_pred CCCEEEEEeCc--------------CCCeeEEECCCC
Q 019979 111 HDTVYFYRCGR--------------QGPEFEFKTPPA 133 (333)
Q Consensus 111 p~t~Y~Y~v~~--------------~s~~~~F~t~p~ 133 (333)
|++.|.+||.. +|+...|+|+|.
T Consensus 77 p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 77 PSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp TTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred CCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 99999999953 256788999874
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.29 E-value=0.00068 Score=48.34 Aligned_cols=64 Identities=13% Similarity=0.091 Sum_probs=38.5
Q ss_pred EEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 48 ISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 48 l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
+.-.+.+++.|.|........ -.|+|+...+......... ........+|++|.|+|.|.+||.
T Consensus 16 ~~~~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~---------~~~~~~~~~l~~L~p~t~Y~frVr 83 (106)
T d1cd9b2 16 VVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFH---------LPSSKDQFELCGLHQAPVYTLQMR 83 (106)
T ss_dssp ----CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEE---------EESCEEEEEECCCCSCSCEEEEEE
T ss_pred EecCCCCEEEEEEcCcccCCccceEEEEEEeeccccccceeeec---------ccCCceEEEEeccCCCeEEEEEEE
Confidence 444568899999986543322 2788876544322221111 112345677999999999999995
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00038 Score=47.85 Aligned_cols=70 Identities=13% Similarity=0.129 Sum_probs=47.2
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
+|..+.+.-.+.+++.|+|.-.... ..-.|+|...++...... . ........+.|+||+||+.|.++|.
T Consensus 3 aP~nl~v~~~~~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~L~p~t~Y~~~V~ 72 (89)
T d1fnha3 3 APSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVV--------P--RPRPGVTEATITGLEPGTEYTIYVI 72 (89)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSSCCSEEEEEEECTTSCCEECT--------T--CCCTTCCEEEEESCCTTCEEEEEEE
T ss_pred cCcCCEEEEecCCEEEEEEeCCCcCCceEEEEEeeccCCccEEE--------E--EcCCCccEEEEEeeeCCCEEEEEEE
Confidence 6888888877899999999865433 334777876553211100 0 1122234678899999999999986
Q ss_pred c
Q 019979 121 R 121 (333)
Q Consensus 121 ~ 121 (333)
.
T Consensus 73 a 73 (89)
T d1fnha3 73 A 73 (89)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00081 Score=46.80 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=46.4
Q ss_pred CCCceEEEEecC-CCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 41 SHPQQVHISLAG-DSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 41 ~~p~~v~l~~~~-~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
..|..+++.-.. .++++|.|.-.... ..-.|+|....+....... . ...+....+.|+||+||+.|..
T Consensus 3 ~PP~~l~v~~~~~ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~-~--------~~~~~~~~~~i~~L~p~t~Y~v 73 (94)
T d1fnfa1 3 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLE-E--------VVHADQSSCTFDNLSPGLEYNV 73 (94)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEE-E--------EECTTCCEEECCCCCTTSCEEE
T ss_pred CcCcCcEEEEecCCCEEEEEeeCCCCCCeeEEEEEEEEecccCceEEE-E--------EeCCCccEEEECCCCCCCEEEE
Confidence 468899888665 45689999865332 3346778765433221111 0 1223345788999999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
+|..
T Consensus 74 ~V~a 77 (94)
T d1fnfa1 74 SVYT 77 (94)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.26 E-value=0.00059 Score=47.70 Aligned_cols=69 Identities=13% Similarity=0.194 Sum_probs=48.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
.+|..+.|...+.+++.|+|...... -.-.|+|....+....... . ......+|.+|+|++.|.+|
T Consensus 4 ~~P~nl~v~~~~~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-~-----------~~~~~~~~~~L~p~t~Y~fr 71 (95)
T d2b5ic1 4 WAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-V-----------DYRHKFSLPSVDGQKRYTFR 71 (95)
T ss_dssp CCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEE-E-----------CSSCEEEECSCCTTSCEEEE
T ss_pred cCCCCCEEEEEeCCEEEEEECCCCCceeEEEEEEEEcCCCceeeEee-e-----------cccceeEcCCCCCCCEEEEE
Confidence 37999999877899999999976432 2347778776543222111 1 12236788999999999999
Q ss_pred eCc
Q 019979 119 CGR 121 (333)
Q Consensus 119 v~~ 121 (333)
|..
T Consensus 72 VRa 74 (95)
T d2b5ic1 72 VRS 74 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.24 E-value=0.0003 Score=49.92 Aligned_cols=71 Identities=15% Similarity=0.198 Sum_probs=43.9
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
..|..+.+.-.+.++++|+|...... ..-.++|............ .........+++||+|+|.|
T Consensus 4 ~pP~~p~~~~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y 73 (104)
T d1bpva_ 4 DPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKAN----------FSNILENEFTVSGLTEDAAY 73 (104)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECC----------CSCCCSSEEEECSCCSSCCE
T ss_pred CCCCCCEEEEecCCEEEEEEEeccccCcceEEEEEEEeecccccceeEEE----------eeccceeEEEEcCCCCCCEE
Confidence 35666666666789999999854221 2246666665433222111 01122335678999999999
Q ss_pred EEEeCc
Q 019979 116 FYRCGR 121 (333)
Q Consensus 116 ~Y~v~~ 121 (333)
.|||..
T Consensus 74 ~frV~A 79 (104)
T d1bpva_ 74 EFRVIA 79 (104)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.24 E-value=0.00053 Score=47.72 Aligned_cols=70 Identities=11% Similarity=0.071 Sum_probs=45.3
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
.|..+.+.-.+.+++.|.|...... ..-.|+|....+....... .........+|+||+||+.|.++|
T Consensus 8 ~P~~l~v~~~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~t~~~i~~L~p~t~Y~~~V 77 (95)
T d2fnba_ 8 QLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED----------FVDSSVGYYTVTGLEPGIDYDISV 77 (95)
T ss_dssp CCTTCEEECCCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEEEEE----------ECCSSCSEEEECCCCTTSEEEEEE
T ss_pred cCCCeEEEEEcCCEEEEEEEecCCceEEeEEEEEEEeeccceEEEE----------EeCCCCeEEEEecccCCEEEEEEE
Confidence 4778878877899999999754322 2335777665432111100 112333467899999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 78 ~a 79 (95)
T d2fnba_ 78 IT 79 (95)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=0.00022 Score=49.64 Aligned_cols=71 Identities=14% Similarity=0.219 Sum_probs=47.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v 119 (333)
.+|..+.++-.+.++++|.|..... ...-.++|....+... . ... .........+|+||+||+.|.++|
T Consensus 3 d~P~~l~v~~vt~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~-----~---~~~--~~~~~~~~~~i~~L~p~t~Y~~~V 72 (94)
T d1j8ka_ 3 DRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIH-----E---LFP--APDGEEDTAELQGLRPGSEYTVSV 72 (94)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEEE-----E---ECC--CCCSSCCEEEECSCCCCSEEEEEE
T ss_pred CCCCCCEEEEecCCEEEEEEeCCCccccceEEEEEeecCCCc-----e---EEE--ecCCCccEEEECCCCCCCEEEEEE
Confidence 4688888887889999999976532 2344677766543211 0 000 122344567899999999999998
Q ss_pred Cc
Q 019979 120 GR 121 (333)
Q Consensus 120 ~~ 121 (333)
..
T Consensus 73 ~a 74 (94)
T d1j8ka_ 73 VA 74 (94)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.22 E-value=0.0007 Score=48.44 Aligned_cols=70 Identities=13% Similarity=0.191 Sum_probs=40.4
Q ss_pred CCceEEEEe--cCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 42 HPQQVHISL--AGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 42 ~p~~v~l~~--~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
.|....+.. .+.+++.|.|........ -.|+|+...+..... .. .........+|+||+|++.|
T Consensus 13 ~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~~~-~~---------~~~~~~~~~~i~~L~p~t~Y 82 (108)
T d1wf5a1 13 APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVL-LA---------SVDPKATSVTVKGLVPARSY 82 (108)
T ss_dssp CCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCEEE-ES---------SCCTTCCEEEEESCCTTCEE
T ss_pred CCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCceEE-ee---------eecCCccEEEECCCCCCCEE
Confidence 444433333 447899999986533222 245666544321111 10 11222335678999999999
Q ss_pred EEEeCc
Q 019979 116 FYRCGR 121 (333)
Q Consensus 116 ~Y~v~~ 121 (333)
.|||..
T Consensus 83 ~frV~A 88 (108)
T d1wf5a1 83 QFRLCA 88 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.13 E-value=0.0013 Score=46.95 Aligned_cols=76 Identities=14% Similarity=0.073 Sum_probs=45.9
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+.+.-.+.++++|.|.-..... .-.|+|............... . . ..........|.||+|++.|.
T Consensus 12 ~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~-~--~--~~~~~~~~~~v~~L~p~t~Y~ 86 (111)
T d1wisa1 12 GPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIH-Q--L--SNEPDARSMEVPDLNPFTCYS 86 (111)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEE-E--E--ESCTTCSEEEECSCCTTSEEC
T ss_pred cCCCCCEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeee-e--e--ecccceeEEEeCCCCCCCEEE
Confidence 378888888677999999998553222 235666654432221111000 0 0 122333456789999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
|||..
T Consensus 87 frV~A 91 (111)
T d1wisa1 87 FRMRQ 91 (111)
T ss_dssp CCCEE
T ss_pred EEEEE
Confidence 99864
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.13 E-value=0.0015 Score=47.45 Aligned_cols=85 Identities=16% Similarity=0.284 Sum_probs=52.7
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEe----ccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYG----TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
++..|..+.+...+.+++.|.|..... .......|. ..... .. .... ...+......|+||+|+
T Consensus 11 P~~~P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~------~~--~~~~--~~~~~~~~~~i~~L~p~ 80 (119)
T d1x5ha1 11 PSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SD--VTET--LVSGTQLSQLIEGLDRG 80 (119)
T ss_dssp CCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EE--EECC--BCCTTCCEEEEECCCSS
T ss_pred CCCCCcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccc------cc--eeee--ecCCCccEEEeCCCCCC
Confidence 345688998887789999999986421 112233343 32210 00 0000 12233456789999999
Q ss_pred CEEEEEeCc--------CCCeeEEECCCC
Q 019979 113 TVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
+.|.++|.. .|+...|+|.+.
T Consensus 81 t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 81 TEYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp CEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred CEEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 999999863 256778888653
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.11 E-value=0.0014 Score=46.67 Aligned_cols=78 Identities=14% Similarity=0.217 Sum_probs=40.8
Q ss_pred ceEEEEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeEEEE--eeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 44 QQVHISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSY--RYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 44 ~~v~l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
..+.++-.+.++++|+|......+.. .|+|.................- .............+|+||+|++.|.|
T Consensus 4 ~~p~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~f 83 (107)
T d2ic2a1 4 TPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRF 83 (107)
T ss_dssp CCCEEEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEE
T ss_pred cCCEEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEE
Confidence 33345656799999999976443333 4566654432221111111000 00001223456789999999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
||..
T Consensus 84 rV~A 87 (107)
T d2ic2a1 84 RILA 87 (107)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.00092 Score=46.84 Aligned_cols=70 Identities=14% Similarity=0.111 Sum_probs=43.3
Q ss_pred cCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCc----
Q 019979 51 AGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR---- 121 (333)
Q Consensus 51 ~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~---- 121 (333)
...++++|+|...... ..-.|+|+.........+.. .. ....+|++|+|++.|.|||..
T Consensus 14 ~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~~----------~~--~~~~~v~~L~p~t~Y~frV~A~N~~ 81 (97)
T d2crza1 14 PKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ----------GS--EVECTVSSLLPGKTYSFRLRAANKM 81 (97)
T ss_dssp CCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEE----------ES--CSEEEEESCCTTCEEEECCEEECSS
T ss_pred eeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEeec----------CC--ceEEEEcCCCCCEEEEEEEEEecCC
Confidence 3478999999853221 22466676655433222110 11 124578999999999999863
Q ss_pred ----CCCeeEEECCC
Q 019979 122 ----QGPEFEFKTPP 132 (333)
Q Consensus 122 ----~s~~~~F~t~p 132 (333)
.|+...++|.|
T Consensus 82 G~s~~S~~~~~~T~p 96 (97)
T d2crza1 82 GFGPFSEKCDITTAP 96 (97)
T ss_dssp CBCCCCCCEEEECCC
T ss_pred eEcCCcCCCeEEeCc
Confidence 25667788876
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.003 Score=44.51 Aligned_cols=71 Identities=17% Similarity=0.215 Sum_probs=43.3
Q ss_pred CCCceEEEEecC-CCcEEEEEEcCCCC-CC----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCE
Q 019979 41 SHPQQVHISLAG-DSHMRVTWITDDES-SP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (333)
Q Consensus 41 ~~p~~v~l~~~~-~~~~~v~W~t~~~~-~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 114 (333)
..|..+.+.... .+.+.+.|...... .. -.|+|....+....... ........+.|.+|+||+.
T Consensus 6 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~----------~~~~~~t~~~i~~L~p~t~ 75 (105)
T d1erna2 6 DAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRV----------EILEGRTECVLSNLRGRTR 75 (105)
T ss_dssp CCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEEE----------EECTTCCEEEECSCCSSCE
T ss_pred CCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCceEEE----------eecCCccEEEEeCCCCCcE
Confidence 468888888765 56799999865322 11 25666665432221110 0112223577999999999
Q ss_pred EEEEeCc
Q 019979 115 YFYRCGR 121 (333)
Q Consensus 115 Y~Y~v~~ 121 (333)
|.+||..
T Consensus 76 Y~~rVRa 82 (105)
T d1erna2 76 YTFAVRA 82 (105)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999953
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.09 E-value=0.00076 Score=47.89 Aligned_cols=80 Identities=13% Similarity=0.141 Sum_probs=48.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCCcEEE----EeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVE----YGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~----y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+.+.-.+.++++|+|.-.......... |.............. .. .....+.+|+|++.|.
T Consensus 12 ~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~~---------~~--~~~~~~~~L~p~t~Y~ 80 (105)
T d1x3da1 12 DIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYM---------GS--QKQFKITKLSPAMGCK 80 (105)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEE---------ES--CSEEEEESCCTTCEEE
T ss_pred cCCCCCEEEEccCCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEec---------CC--ccEEEecCCcCCcEEE
Confidence 46888888877899999999876433334333 333322211111100 11 2245678999999999
Q ss_pred EEeCc--------CCCeeEEECC
Q 019979 117 YRCGR--------QGPEFEFKTP 131 (333)
Q Consensus 117 Y~v~~--------~s~~~~F~t~ 131 (333)
+||.. .|+...|+|.
T Consensus 81 frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 81 FRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EECCEEESSCBCCCCCCEEEECS
T ss_pred EEEEEECCCeEcCCCCcEEEECC
Confidence 99974 2456677764
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.08 E-value=0.00036 Score=49.36 Aligned_cols=75 Identities=16% Similarity=0.232 Sum_probs=46.4
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+...+.+++.|.|.-..... .-.|+|.......... +...... ....-...++|.||+|++.|.+
T Consensus 5 ~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~~ 79 (103)
T d1qg3a2 5 EPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVL---VDNPKNRMLLIENLRESQPYRY 79 (103)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBC--SCCEEEE---ECCTTCCEEEECCCCTTCCEEE
T ss_pred cCCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccc--cceEEEE---ecCCCceEEEEeecCCCCEEEE
Confidence 68888888888999999998654322 2256665554322111 0000000 1222234678999999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
||..
T Consensus 80 ~V~A 83 (103)
T d1qg3a2 80 TVKA 83 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.04 E-value=0.00019 Score=52.62 Aligned_cols=87 Identities=15% Similarity=0.200 Sum_probs=49.0
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCC-CeeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 38 KPSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGY-NCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
.+...|..+.+.-.+.++++|.|...... ..-.++|....... ..... . .+ ... ....+|++|+|
T Consensus 14 ~pp~~P~~p~v~~vt~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~~-~--~~----~~~--~~~~~v~~L~p 84 (120)
T d1wfua_ 14 VPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYG-V--IY----TGY--ATRHVVEGLEP 84 (120)
T ss_dssp CCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEE-E--EE----EES--CSEEEEESCCT
T ss_pred cCCCcCCCCEEeEecCCEEEEEEECCcccCcccccceeeeeeeeccccccccee-e--ec----ccc--ccEEeCCCCCC
Confidence 34456666655545589999999854321 12246665422111 10000 0 00 011 12457899999
Q ss_pred CCEEEEEeCc--------CCCeeEEECCCC
Q 019979 112 DTVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
++.|.|||.. .|+...++|.+.
T Consensus 85 ~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 85 RTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp TCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred CcEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 9999999864 256778888653
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0025 Score=45.27 Aligned_cols=77 Identities=14% Similarity=0.073 Sum_probs=47.9
Q ss_pred ccCCCCCCCCCceEEEEecC--CCcEEEEEEcCCCC---C----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEE
Q 019979 33 FPWDPKPSSHPQQVHISLAG--DSHMRVTWITDDES---S----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHH 103 (333)
Q Consensus 33 ~~~~~~~~~~p~~v~l~~~~--~~~~~v~W~t~~~~---~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (333)
+|+...-...|..+.+.... .+++.|+|...... . .-.++|....+....... ......
T Consensus 1 ~p~~iVkP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~------------~~~~~~ 68 (109)
T d1uc6a_ 1 GPLGSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVE------------LSNGTA 68 (109)
T ss_dssp CCTTSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEE------------ESSCSE
T ss_pred CCCCCEECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEec------------cCCcee
Confidence 35555555678899887653 67899999975321 1 124555554433222111 111235
Q ss_pred EEeCCCCCCCEEEEEeCc
Q 019979 104 TVIGPLEHDTVYFYRCGR 121 (333)
Q Consensus 104 ~~l~~L~p~t~Y~Y~v~~ 121 (333)
.+|.+|+|+|.|.+||..
T Consensus 69 ~~i~~L~~~t~Y~~rVrA 86 (109)
T d1uc6a_ 69 HTITDAYAGKEYIIQVAA 86 (109)
T ss_dssp EEETTCCSSSCEEEEEEC
T ss_pred EEeCCCCCCCEEEEEEEE
Confidence 678999999999999964
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=97.01 E-value=0.0011 Score=46.57 Aligned_cols=70 Identities=13% Similarity=0.183 Sum_probs=42.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+.. ..+++.|+|.-..... .-.|+|............... ... .....+.+|+|++.|.|
T Consensus 8 ~P~~~~v~~-~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~L~p~t~Y~f 77 (100)
T d1cfba1 8 APKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK-------VPN--TDSSFVVQMSPWANYTF 77 (100)
T ss_dssp CCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE-------EET--TCSEEEEECCSSEEEEE
T ss_pred cCcCcEEEE-cCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeee-------cCC--ceEEEEecCCCCCEEEE
Confidence 788888774 5678999998554322 236777765443322211110 011 12345779999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
||..
T Consensus 78 rV~A 81 (100)
T d1cfba1 78 RVIA 81 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.0017 Score=46.26 Aligned_cols=80 Identities=15% Similarity=0.145 Sum_probs=49.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+.+. .+.++++|.|.-.... ..-.|+|+...+.. ..... ........++|.||+|++.|.
T Consensus 9 sPP~~~~~~-~t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~-~~~~~---------~~~~~~~~~~i~~L~p~t~Y~ 77 (108)
T d1v5ja_ 9 SPPRGLVAV-RTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGW-EVLDP---------AVAGTETELLVPGLIKDVLYE 77 (108)
T ss_dssp CCCEEEEEE-ECSSSEEEEEECCSCCSSCCCBEEEEEEETTCCC-EEEEE---------EECSSCCEEECCCCCTTSCEE
T ss_pred CcCCCeEEE-EcCCEEEEEEEecccCCCceeEEEEEeeeeeeee-eeccc---------cccceeeeEEEEeccCCcEEE
Confidence 457777654 4678999999854322 22367777654332 11111 122334567899999999999
Q ss_pred EEeCcC--------CCeeEEECC
Q 019979 117 YRCGRQ--------GPEFEFKTP 131 (333)
Q Consensus 117 Y~v~~~--------s~~~~F~t~ 131 (333)
|||..- ++...++|.
T Consensus 78 ~rV~A~n~~g~s~~S~~~~~~T~ 100 (108)
T d1v5ja_ 78 FRLVAFAGSFVSDPSNTANVSTS 100 (108)
T ss_dssp CCBEEEETTEEEEECSCCCCCCS
T ss_pred EEEEEEeCCCEeCCcCceEEECC
Confidence 998641 445556664
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=96.99 E-value=0.0014 Score=46.49 Aligned_cols=74 Identities=12% Similarity=0.101 Sum_probs=46.7
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCC--C----CCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 39 PSSHPQQVHISLAGDSHMRVTWITDD--E----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~v~W~t~~--~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
+...|..|.+.....++++|+|.-.. . ...-.|+|............ . .........+|.+|+|+
T Consensus 4 P~~~P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~-------~--~~~~~~~~~~i~~L~p~ 74 (105)
T d1cfba2 4 PFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN-------N--IFDWRQNNIVIADQPTF 74 (105)
T ss_dssp CSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEE-------E--ECCTTCCEEEECSCCSS
T ss_pred CCCCCcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEE-------E--ecCCCccEEEECCCCCC
Confidence 44678888888777999999996421 1 11225677655433221110 0 12233456789999999
Q ss_pred CEEEEEeCc
Q 019979 113 TVYFYRCGR 121 (333)
Q Consensus 113 t~Y~Y~v~~ 121 (333)
+.|.++|..
T Consensus 75 t~Y~~~V~A 83 (105)
T d1cfba2 75 VKYLIKVVA 83 (105)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999864
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.0014 Score=47.12 Aligned_cols=71 Identities=17% Similarity=0.223 Sum_probs=43.1
Q ss_pred CCceEEEEecC--CCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 42 HPQQVHISLAG--DSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 42 ~p~~v~l~~~~--~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
.|..+.+...+ .++++|.|.-..... .-.|+|+...+......... ...+....+.|++|+|++.|
T Consensus 7 pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~~~t~Y 78 (115)
T d1bqua2 7 PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTEY 78 (115)
T ss_dssp CCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSEEE
T ss_pred CCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccccc--------cccccccEEeeCCCccCcEE
Confidence 57777776544 788999998543222 23566766544322111000 12233456789999999999
Q ss_pred EEEeC
Q 019979 116 FYRCG 120 (333)
Q Consensus 116 ~Y~v~ 120 (333)
.+||.
T Consensus 79 ~~~V~ 83 (115)
T d1bqua2 79 VFRIR 83 (115)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99995
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.86 E-value=0.0026 Score=46.58 Aligned_cols=71 Identities=14% Similarity=0.193 Sum_probs=44.1
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+...+.+++.|.|.-...... ..++|.............. .........|.+|+|++.|.+
T Consensus 19 ~P~~~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~f 89 (127)
T d1ueya_ 19 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT---------EVSGTQTTAQLNLSPYVNYSF 89 (127)
T ss_dssp CCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE---------EEESSCCEEEECCCTTCEECC
T ss_pred CCCCcEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEe---------ecCCceEEEECCCccCCEEEE
Confidence 688898887889999999986543322 2445554443322211111 111223456789999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
||..
T Consensus 90 rV~A 93 (127)
T d1ueya_ 90 RVMA 93 (127)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9863
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.0016 Score=44.81 Aligned_cols=66 Identities=14% Similarity=0.230 Sum_probs=42.1
Q ss_pred EEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCc
Q 019979 46 VHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (333)
Q Consensus 46 v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 121 (333)
+.++-.++++++|.|...... ..-.|+|....+...... .. .++....+.|+||+||+.|.++|..
T Consensus 3 l~v~~~t~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~------~~----~~~~~t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 3 LEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQE------FT----VPGSKSTATISGLKPGVDYTITVYA 69 (91)
T ss_dssp CEEEEECSSCEEEECCCCSSCCSEEEEEEEETTCCSCCEE------EE----EETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CEEEEeCCCEEEEEEEccceEecEEEEEEEcCCCCceeEE------EE----eCCCccEEEeCCCCCCCEEEEEEEE
Confidence 445666799999999765333 344777877654322110 00 1122336789999999999999853
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.0011 Score=48.09 Aligned_cols=70 Identities=9% Similarity=0.188 Sum_probs=42.7
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+.-.+.++++|+|.-..... .-.|+|.............. ... ....+|+||+|++.|.|
T Consensus 18 pP~~~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~~--~~~~~v~~L~p~t~Y~f 87 (117)
T d1uema_ 18 PPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN--------HVK--TTLYTVRGLRPNTIYLF 87 (117)
T ss_dssp CCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEE--------EEC--SSEEEECSCCTTCEEEE
T ss_pred CCCCCEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEecc--------ccc--cccceECCCCCCCEEEE
Confidence 67888888778999999996432211 23555655442211111000 011 12457899999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
||..
T Consensus 88 rV~A 91 (117)
T d1uema_ 88 MVRA 91 (117)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.0027 Score=44.96 Aligned_cols=72 Identities=18% Similarity=0.250 Sum_probs=41.1
Q ss_pred EecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCc--
Q 019979 49 SLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR-- 121 (333)
Q Consensus 49 ~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~-- 121 (333)
.-.++++++|.|...... ..-.++|............ .........+.||+||+.|.+||..
T Consensus 21 ~~~~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~rV~A~n 89 (107)
T d2crma1 21 GKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMI-----------YSGATREHLCDRLNPGCFYRLRVYCIS 89 (107)
T ss_dssp EEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEE-----------ECSSCSEEEECSCCTTSCEEEEEEEEE
T ss_pred eeecCCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEe-----------ecCCccEEEEeccCCCCEEEEEEEEEC
Confidence 334588999999854321 1235555544432222111 1111224578999999999999964
Q ss_pred ------CCCeeEEECC
Q 019979 122 ------QGPEFEFKTP 131 (333)
Q Consensus 122 ------~s~~~~F~t~ 131 (333)
.|+...++|+
T Consensus 90 ~~G~s~~S~~v~v~Tp 105 (107)
T d2crma1 90 DGGQSAVSESLLVQTP 105 (107)
T ss_dssp TTEECCCCCCCCCCCC
T ss_pred CCcCcCCCCcEEEECC
Confidence 2445556654
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0056 Score=42.71 Aligned_cols=78 Identities=10% Similarity=0.081 Sum_probs=42.9
Q ss_pred CCceEEEEec----CCCcEEEEEEcCCCC----CCcEE----EEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCC
Q 019979 42 HPQQVHISLA----GDSHMRVTWITDDES----SPSVV----EYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (333)
Q Consensus 42 ~p~~v~l~~~----~~~~~~v~W~t~~~~----~~~~v----~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 109 (333)
.|..+.+... +.+++.|+|...... ....+ +|....+....... ......++|.||
T Consensus 5 pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~------------~~~~~~~~i~~L 72 (104)
T d3d48r2 5 PPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKILSL 72 (104)
T ss_dssp CCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEE------------EETCSEEEECC-
T ss_pred CCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeec------------cccccEEEECCC
Confidence 6777777633 367899999975321 11233 44444332221111 112235678999
Q ss_pred CCCCEEEEEeCc---------CCCeeEEECC
Q 019979 110 EHDTVYFYRCGR---------QGPEFEFKTP 131 (333)
Q Consensus 110 ~p~t~Y~Y~v~~---------~s~~~~F~t~ 131 (333)
+|++.|.+||.. +|+...++||
T Consensus 73 ~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 73 HPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp -CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 999999999963 2555667665
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.77 E-value=0.0026 Score=45.91 Aligned_cols=72 Identities=11% Similarity=0.181 Sum_probs=45.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+.+.-.+.+++.|.|.-..... .-.|+|.............. .........|+||+|++.|.
T Consensus 22 ~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 92 (117)
T d1wfoa1 22 GPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEV---------LAPSARQYTATGLKPESVYL 92 (117)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEE---------ECTTCCEEEEESCCSSSEEE
T ss_pred cCCCCcEEEEecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeEEe---------cCCceEEEEECCCCCCCEEE
Confidence 478888888778999999997543222 22577765544322111100 11222345689999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
+||..
T Consensus 93 ~~V~A 97 (117)
T d1wfoa1 93 FRITA 97 (117)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.0066 Score=41.61 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=42.2
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
+|. +.+.-.+.+++.|.|.-..... .-.|+|+........... ........+|+||+|++.|.+
T Consensus 3 ~P~-~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 70 (94)
T d2dn7a1 3 RPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----------FGKDDQHFTVTGLHKGTTYIF 70 (94)
T ss_dssp CCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----------EETTCCEEEEECCCTTCEEEE
T ss_pred CCc-EeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEE-----------cCCCccEEEEEccCCeeEEEE
Confidence 464 4355566899999999654322 235677665543222111 111223457899999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
||..
T Consensus 71 ~V~A 74 (94)
T d2dn7a1 71 RLAA 74 (94)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.76 E-value=0.0075 Score=42.13 Aligned_cols=68 Identities=7% Similarity=-0.004 Sum_probs=41.3
Q ss_pred CCceEEEEec----CCCcEEEEEEcCCCC----CCc----EEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCC
Q 019979 42 HPQQVHISLA----GDSHMRVTWITDDES----SPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (333)
Q Consensus 42 ~p~~v~l~~~----~~~~~~v~W~t~~~~----~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 109 (333)
.|..+.+... ..+++.|+|...... ... .|+|...+......... . .....+|.||
T Consensus 5 pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~----------~--~~~~~~i~~L 72 (103)
T d1f6fb2 5 PPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFT----------G--HQTQFKVFDL 72 (103)
T ss_dssp CCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEE----------E--TCSEEEECCC
T ss_pred CCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeecc----------c--ceeEEEeCCC
Confidence 5777666532 367899999876321 112 45555555433322110 1 1235788999
Q ss_pred CCCCEEEEEeCc
Q 019979 110 EHDTVYFYRCGR 121 (333)
Q Consensus 110 ~p~t~Y~Y~v~~ 121 (333)
+||+.|.+||..
T Consensus 73 ~p~t~Y~~rVra 84 (103)
T d1f6fb2 73 YPGQKYLVQTRC 84 (103)
T ss_dssp CTTCEEEEEEEE
T ss_pred CcceEEEEEEEE
Confidence 999999999963
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.70 E-value=0.0053 Score=43.10 Aligned_cols=69 Identities=16% Similarity=0.123 Sum_probs=44.2
Q ss_pred CCceEEEEecC--CCcEEEEEEcCCC--CC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCC
Q 019979 42 HPQQVHISLAG--DSHMRVTWITDDE--SS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (333)
Q Consensus 42 ~p~~v~l~~~~--~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 113 (333)
.|..+.++..+ .+++.|+|..... .. .-.|+|............ ..+......|.+|+|++
T Consensus 4 pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t 72 (104)
T d1n26a3 4 PPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-----------VKDLQHHCVIHDAWSGL 72 (104)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-----------CGGGCSEEEESSCCTTC
T ss_pred CCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeec-----------cccceEEEEECCCCCCC
Confidence 68888887654 6789999996431 11 135666665543222111 11223467899999999
Q ss_pred EEEEEeCc
Q 019979 114 VYFYRCGR 121 (333)
Q Consensus 114 ~Y~Y~v~~ 121 (333)
.|.+||..
T Consensus 73 ~Y~~rVra 80 (104)
T d1n26a3 73 RHVVQLRA 80 (104)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.65 E-value=0.017 Score=46.94 Aligned_cols=164 Identities=19% Similarity=0.277 Sum_probs=90.4
Q ss_pred eeEEEEeecCCCCChhh----HHHHhhcCCCCeEEccccccccccc--hhhHHHHHHhhhhhhcCCceEEccCCCCCCCC
Q 019979 137 ITFAVAGDLGQTGWTKS----TLDHIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~~~----~~~~i~~~~~d~vl~~GDl~~~~~~--~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~ 210 (333)
+||+++||.= +...++ .+..+ +.+.||||..|..+-.+.- ....+++++ ..+-+ .+.|||=+...
T Consensus 1 MkiLfiGDIv-G~~Gr~~v~~~Lp~L-k~~~DfVIaNgENaa~G~Git~k~~~~L~~------~GVDv-IT~GNH~wdkk 71 (252)
T d2z06a1 1 MRVLFIGDVM-AEPGLRAVGLHLPDI-RDRYDLVIANGENAARGKGLDRRSYRLLRE------AGVDL-VSLGNHAWDHK 71 (252)
T ss_dssp CEEEEECCBC-HHHHHHHHHHHHHHH-GGGCSEEEEECTTTTTTSSCCHHHHHHHHH------HTCCE-EECCTTTTSCT
T ss_pred CeEEEEeccC-CHHHHHHHHHHhHHH-HhhCCEEEEeeeccCCCcCCCHHHHHHHHH------hCCCE-EEcCcccccch
Confidence 4899999982 222233 33444 3468999999999753321 222222221 22554 48999988543
Q ss_pred CCccccccccccccccCcCC-CCCCCCceEEEEeCCEEEEEEeccCC--CCCCHHHHHHHHHHhhcccCCCCCeEEEEec
Q 019979 211 PLIMDAFQSYNARWKMPFEE-SGSNSNLYYSFDVAGAHLIMLGSYAD--YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLH 287 (333)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~-~~~~~~~~ys~~~g~v~fi~lds~~~--~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H 287 (333)
.. ..+-. .++.-.|.|- .+..+..|+.++.++.++.++|-... ....+.-.+-+++.+++. +.+.+||=+|
T Consensus 72 ei--~~~i~-~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~~---~~~~i~VDfH 145 (252)
T d2z06a1 72 EV--YALLE-SEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEE---KADYVLVEVH 145 (252)
T ss_dssp TH--HHHHH-HSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHC---CCSEEEEEEE
T ss_pred hh--hhhhc-cccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhhc---CccEEEEEcc
Confidence 22 11111 1122234332 23345778889999888888876321 111122233344445442 4566888888
Q ss_pred cccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccc
Q 019979 288 VPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327 (333)
Q Consensus 288 ~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 327 (333)
.=. ... +.-.-.+-+-+|.+|+.=|+|.
T Consensus 146 aEa-----------TSE-K~A~g~~ldGrvsavvGTHTHV 173 (252)
T d2z06a1 146 AEA-----------TSE-KMALAHYLDGRASAVLGTHTHV 173 (252)
T ss_dssp CSC-----------HHH-HHHHHHHHBTTBSEEEEESSCS
T ss_pred cch-----------hhh-heeeeEecCCCEEEEEecCccc
Confidence 532 111 2233445567899999999996
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.62 E-value=0.015 Score=47.54 Aligned_cols=164 Identities=16% Similarity=0.163 Sum_probs=92.5
Q ss_pred eeEEEEeecCCCCChh----hHHHHhhcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCCCCC
Q 019979 137 ITFAVAGDLGQTGWTK----STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (333)
Q Consensus 137 ~~f~~~gD~~~~~~~~----~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~~~~ 212 (333)
+||+++||. .+...+ +.+..++ .+.||||..|..+-.+ ..-..+.+.++++ + .+-+ .+.|||=+....
T Consensus 1 MkILfiGDI-vG~~Gr~~v~~~Lp~lk-~~~DfVIaNgENaa~G-~Git~~~~~~l~~-~--GvDv-iT~GNH~wdkke- 72 (255)
T d1t70a_ 1 MRVLFIGDV-FGQPGRRVLQNHLPTIR-PQFDFVIVNMENSAGG-FGMHRDAARGALE-A--GAGC-LTLGNHAWHHKD- 72 (255)
T ss_dssp CEEEEECCB-BHHHHHHHHHHHHHHHG-GGCSEEEEECTBTTTT-SSCCHHHHHHHHH-H--TCSE-EECCTTTTSSTT-
T ss_pred CeEEEEecC-CCHHHHHHHHHHhHHHH-hhCCEEEECCccCCCC-cCCCHHHHHHHHH-c--CCcE-EEcCchhhcchh-
Confidence 489999998 222223 3344453 4689999999998543 2111222222221 1 2554 489999885322
Q ss_pred ccccccccc----cccccCcCC--CCCCCCceEEEEeCCEEEEEEeccC--CCCCCHHHHHHHHHHhhcccCCCCCeEEE
Q 019979 213 IMDAFQSYN----ARWKMPFEE--SGSNSNLYYSFDVAGAHLIMLGSYA--DYDEYSDQYRWLKDDLSKVDRKKTPWLLV 284 (333)
Q Consensus 213 ~~~~~~~~~----~~~~~p~~~--~~~~~~~~ys~~~g~v~fi~lds~~--~~~~~~~q~~WL~~~L~~~~~~~~~~~iv 284 (333)
...|. .+.-.|.|- .+..+..|+.++..+.++.++|-.. .....+.-..-+++.|++. +.+.+||
T Consensus 73 ----i~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~~~---~~~~i~V 145 (255)
T d1t70a_ 73 ----IYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLGTVFV 145 (255)
T ss_dssp ----HHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCCEEEE
T ss_pred ----HHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHhhc---CCCeEEE
Confidence 12221 122234332 2344677888888887888877632 1112233344566667653 4456888
Q ss_pred EeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccc
Q 019979 285 LLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327 (333)
Q Consensus 285 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 327 (333)
=+|.=. ... +.-.-.+-+-+|.+|+.=|+|.
T Consensus 146 DfHaEa-----------TSE-K~A~g~~ldGrvsav~GTHTHV 176 (255)
T d1t70a_ 146 DFHAEA-----------TSE-KEAMGWHLAGRVAAVIGTHTHV 176 (255)
T ss_dssp EEECSC-----------HHH-HHHHHHHHTTSSSEEEEESSCS
T ss_pred Eccchh-----------HHH-HHHHHhhhcCcEEEEEecCccc
Confidence 888532 111 2233345567899999999996
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.59 E-value=0.0027 Score=47.17 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=24.9
Q ss_pred EEEEeCCCCCCCEEEEEeCc--------CCCeeEEECCC
Q 019979 102 HHTVIGPLEHDTVYFYRCGR--------QGPEFEFKTPP 132 (333)
Q Consensus 102 ~~~~l~~L~p~t~Y~Y~v~~--------~s~~~~F~t~p 132 (333)
..++|+||+|+|.|.+||.. .|+...|+|++
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~ 120 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLS 120 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCC
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCC
Confidence 35789999999999999863 25677899964
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.003 Score=44.59 Aligned_cols=70 Identities=13% Similarity=0.113 Sum_probs=43.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y 117 (333)
.|..+.+.-.+.+++.|.|....... .-.|+|............ .........+|+||+|++.|.+
T Consensus 13 ~p~~l~~~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~ 82 (106)
T d1wfna1 13 PVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTH----------YLPNVTLEYRVTGLTALTTYTI 82 (106)
T ss_dssp CCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCE----------EECSSCCEEEEESCCTTCEEEE
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEEE----------ecCCCeeEEEEccCCCCCEEEE
Confidence 67888887677899999997543322 234666554432111100 0122234567899999999999
Q ss_pred EeCc
Q 019979 118 RCGR 121 (333)
Q Consensus 118 ~v~~ 121 (333)
+|..
T Consensus 83 ~V~A 86 (106)
T d1wfna1 83 EVAA 86 (106)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.52 E-value=0.0074 Score=42.54 Aligned_cols=79 Identities=6% Similarity=0.002 Sum_probs=46.9
Q ss_pred CCCCceEE-EEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEE
Q 019979 40 SSHPQQVH-ISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (333)
Q Consensus 40 ~~~p~~v~-l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 115 (333)
+..|..|. ++....++|+++|.-..... ...+.|................ ...........+.+.+|+|++.|
T Consensus 5 P~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~~~t~Y 81 (107)
T d1cd9b1 5 PASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPD---CVAKKRQNNCSIPRKNLLLYQYM 81 (107)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEE---EECCTTCCEEEEEGGGCCTTSCE
T ss_pred cCCCcCCEEEEecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeee---eccccCccccEEEcCCCCcCceE
Confidence 34788886 56566899999998654332 2355565543221111100000 00012345667889999999999
Q ss_pred EEEeCc
Q 019979 116 FYRCGR 121 (333)
Q Consensus 116 ~Y~v~~ 121 (333)
.+||..
T Consensus 82 ~frV~A 87 (107)
T d1cd9b1 82 AIWVQA 87 (107)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.46 E-value=0.012 Score=42.55 Aligned_cols=92 Identities=9% Similarity=0.002 Sum_probs=50.9
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEee--EEEEeee---eeecCeEEEEEeCCCCC
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGE--STSYRYL---FYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~l~~L~p 111 (333)
..|..|.++. ..+++.|+|.-.... ..-.|+|.............. ...+... ....+......|.+|+|
T Consensus 9 ~aP~~v~v~~-~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 87 (123)
T d1wfta_ 9 GAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDYTS 87 (123)
T ss_dssp CCCEEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBCSS
T ss_pred cCCcccEEEe-CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcCCCC
Confidence 3788888874 578999999954322 234677776554321110000 0000000 00111112336789999
Q ss_pred CCEEEEEeCc--------CCCeeEEECCCC
Q 019979 112 DTVYFYRCGR--------QGPEFEFKTPPA 133 (333)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (333)
++.|.|||.. .++...|+|...
T Consensus 88 ~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~ 117 (123)
T d1wfta_ 88 RPAIVFRISAKNEKGYGPATQIRWLQGNSK 117 (123)
T ss_dssp SCEEEEEEEEBSSSSBCCCEEEEEECCSCC
T ss_pred CCEEEEEEEEecCCcCCCCCCcEEEEecCC
Confidence 9999999964 145667777543
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=96.37 E-value=0.019 Score=47.51 Aligned_cols=170 Identities=14% Similarity=0.129 Sum_probs=91.2
Q ss_pred CCeeEEEEeecCCCCChhhH----HHHh-hcCCCCeEEccccccccccchhhHHHHHHhhhhhhcCCceEEccCCCCCCC
Q 019979 135 FPITFAVAGDLGQTGWTKST----LDHI-GQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (333)
Q Consensus 135 ~~~~f~~~gD~~~~~~~~~~----~~~i-~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~~~GNHD~~~ 209 (333)
...|++++||. .+...+++ +..+ ++.++||||..|-.+-.+ ..-..+.+.+++ . ..+-+ .+.|||=+..
T Consensus 3 ~~MkILfiGDI-vG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G-~Git~k~~~eL~-~--~GvDv-IT~GNH~wd~ 76 (281)
T d1t71a_ 3 NSIKFIFLGDV-YGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHG-KGLSLKHYEFLK-E--AGVNY-ITMGNHTWFQ 76 (281)
T ss_dssp CCCEEEEECEE-BHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTT-SSCCHHHHHHHH-H--HTCCE-EECCTTTTCC
T ss_pred ccceEEEEEcc-CCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCCC-cCCCHHHHHHHH-H--hCCcE-EEcCchhhhc
Confidence 46899999998 22223333 3333 377999999999998633 211122222221 1 22554 4899998743
Q ss_pred CCCccccccccccccccCcCC-----CCCCCCceEEEEeCCEEEEEEeccCC-CC---CCHHHHHHHHHHhhcccCCCCC
Q 019979 210 IPLIMDAFQSYNARWKMPFEE-----SGSNSNLYYSFDVAGAHLIMLGSYAD-YD---EYSDQYRWLKDDLSKVDRKKTP 280 (333)
Q Consensus 210 ~~~~~~~~~~~~~~~~~p~~~-----~~~~~~~~ys~~~g~v~fi~lds~~~-~~---~~~~q~~WL~~~L~~~~~~~~~ 280 (333)
... ..+-.-..+.-.|.|- .+..+..+..++.++.++.++|-... +. .......-+++.+.+ .+.+
T Consensus 77 kei--~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~---~~~d 151 (281)
T d1t71a_ 77 KLD--LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK---RDCD 151 (281)
T ss_dssp GGG--HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT---CCCS
T ss_pred hhh--HHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHHhhcc---cCCC
Confidence 211 0110001112223331 12345678889988777777776321 11 111223334444443 2556
Q ss_pred eEEEEeccccccCCCCCCCCChhHHHHHHHHHHhCCCcEEEecCccc
Q 019979 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327 (333)
Q Consensus 281 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 327 (333)
.+||=+|.=. ... +.-.-.+-+-+|.+|+.=|+|.
T Consensus 152 ~i~VDfHaEA-----------TSE-K~A~g~~lDGrvsaVvGTHTHV 186 (281)
T d1t71a_ 152 LHIVDFHAET-----------TSE-KNAFCMAFDGYVTTIFGTHTHV 186 (281)
T ss_dssp EEEEEEECSC-----------HHH-HHHHHHHHTTTSSEEEEESSSS
T ss_pred eEEEEeccch-----------hhh-hhhheeeeCCcEEEEEecCccc
Confidence 7888888532 111 2223345567899999999996
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.28 E-value=0.0064 Score=44.12 Aligned_cols=76 Identities=14% Similarity=0.184 Sum_probs=45.0
Q ss_pred CCCcEEEEEEcCCCC---CCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCc-------
Q 019979 52 GDSHMRVTWITDDES---SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR------- 121 (333)
Q Consensus 52 ~~~~~~v~W~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~------- 121 (333)
+++++.|+|.-.... ..-.|.|.......... ...... .........+|.||+|+|.|.+||..
T Consensus 28 s~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~~---~~~~~~---v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G 101 (120)
T d1ujta_ 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATS---SWQNLD---AKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQG 101 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTT---CCEEEE---CCCTTCCEEEEESCCSSEEEEEEEEEESSSCCC
T ss_pred CCCeEEEEecCCCCCCcEEEEEEEeeecccCCCCc---ceEEEE---eccCceeEEEECCCCCCCEEEEEEEEEeCCcCc
Confidence 479999999866322 23467786554321100 000000 12233446778999999999999853
Q ss_pred -CCCeeEEECCCC
Q 019979 122 -QGPEFEFKTPPA 133 (333)
Q Consensus 122 -~s~~~~F~t~p~ 133 (333)
.|+...++|++.
T Consensus 102 ~~S~~~~~~T~e~ 114 (120)
T d1ujta_ 102 MDSESKTVRTTEE 114 (120)
T ss_dssp CCCCCEEEEECSS
T ss_pred CCCCCEEEEeCCC
Confidence 255667888653
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.03 E-value=0.008 Score=42.88 Aligned_cols=68 Identities=15% Similarity=0.195 Sum_probs=42.9
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
..|..+++.. ..+++.|.|.-..... .-.|+|+..... .... .........+|.+|+|++.|.
T Consensus 22 ~~P~~~~~~~-~~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~-~~~~-----------~~~~~~~~~~i~~L~p~t~Y~ 88 (113)
T d1x5ia1 22 EVPSSLHVRP-LVTSIVVSWTPPENQNIVVRGYAIGYGIGSPH-AQTI-----------KVDYKQRYYTIENLDPSSHYV 88 (113)
T ss_dssp CSCSEEEEEE-ETTEEEEEEECCSCTTBCCCEEEEEECSSCGG-GEEE-----------ECCTTCCEEEECSCCSSCEEC
T ss_pred CCCEeeeeee-CCCEEEEEEEccccCCccEEEEEEEeeecccc-ceee-----------eeeCCccEEEEeccccCcEEE
Confidence 4788888764 4679999999543322 225666554321 1110 122334466899999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
+||..
T Consensus 89 ~~V~A 93 (113)
T d1x5ia1 89 ITLKA 93 (113)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 99864
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.97 E-value=0.0092 Score=42.11 Aligned_cols=68 Identities=13% Similarity=0.138 Sum_probs=40.5
Q ss_pred CCceEEEEecC------CCcEEEEEEcCCCC----C----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeC
Q 019979 42 HPQQVHISLAG------DSHMRVTWITDDES----S----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (333)
Q Consensus 42 ~p~~v~l~~~~------~~~~~v~W~t~~~~----~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 107 (333)
.|..+.++... ..++.|+|.-.... . .-.|+|+...+....... ......++|+
T Consensus 3 PP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~------------~~~~~~~~i~ 70 (106)
T d1axib2 3 PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSVPVY 70 (106)
T ss_dssp CCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEEEEE
T ss_pred CCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeee------------ecccceEEEC
Confidence 46666665432 34799999865321 1 135666665543322211 1112367789
Q ss_pred CCCCCCEEEEEeCc
Q 019979 108 PLEHDTVYFYRCGR 121 (333)
Q Consensus 108 ~L~p~t~Y~Y~v~~ 121 (333)
+|+||+.|.+||..
T Consensus 71 ~L~~~t~Y~frVRa 84 (106)
T d1axib2 71 SLKVDKEYEVRVRS 84 (106)
T ss_dssp EEETTSCEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999953
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.64 E-value=0.018 Score=39.53 Aligned_cols=73 Identities=11% Similarity=0.020 Sum_probs=45.1
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 40 SSHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
...|..+.+...+.++++++|.-..... .-.|+|....+....... ....-.....+.+|+|++.|+
T Consensus 4 P~~P~n~~~~~~~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~L~~~~~Y~ 73 (95)
T d1bqua1 4 PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKA----------KRDTPTSCTVDYSTVYFVNIE 73 (95)
T ss_dssp CCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEEC----------CSSCTTEEECSSCCCTTSCEE
T ss_pred cCCCeeeEEEEccCCEEEEEEeCcccCCCceEEEEEEEEcccceeEeec----------ccccceeeeeeeecCCCcEEE
Confidence 3478888888788999999998764332 235666554322111100 011112224567999999999
Q ss_pred EEeCcC
Q 019979 117 YRCGRQ 122 (333)
Q Consensus 117 Y~v~~~ 122 (333)
+||...
T Consensus 74 f~V~A~ 79 (95)
T d1bqua1 74 VWVEAE 79 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999753
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.52 E-value=0.01 Score=41.11 Aligned_cols=69 Identities=14% Similarity=0.250 Sum_probs=37.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 116 (333)
+|..|+++. +.+++.|.|....... .-.|+|+...+.-....... ......+.|.+|+||+.|.
T Consensus 7 ~Pp~l~v~~-~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~----------~~~~~~~~l~~L~p~t~Y~ 75 (100)
T d2gysa4 7 APPSLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTET----------LQNAHSMALPALEPSTRYW 75 (100)
T ss_dssp CCCEEEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEE----------EESCSEEECCCCCSSCCCE
T ss_pred CCCccEEEE-CCCEEEEEEecCcccCCccceEEEEEEeecccceeceeecc----------cCCceEEEeCCCCCCCeEE
Confidence 455566653 3578999998764322 23677776543321110000 0112367789999999999
Q ss_pred EEeCc
Q 019979 117 YRCGR 121 (333)
Q Consensus 117 Y~v~~ 121 (333)
+||..
T Consensus 76 ~rVRa 80 (100)
T d2gysa4 76 ARVRV 80 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.37 E-value=0.00055 Score=48.51 Aligned_cols=86 Identities=13% Similarity=0.043 Sum_probs=46.9
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeC
Q 019979 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (333)
Q Consensus 41 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~ 120 (333)
..|..|.+.....+++.|+|..........+.|...=............. .......+...|.+|+|++ |.+||.
T Consensus 6 d~P~~v~~~~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~----~~~~~~~~~~~~~~L~~~t-Y~~rV~ 80 (102)
T d2dtge1 6 DIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDT----RKHFALERGCRLRGLSPGN-YSVRIR 80 (102)
T ss_dssp CCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCC----SSSCCCTTCCCCCSCCSSE-ECCCCC
T ss_pred CCCCCCEEEEECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeee----eecccceEEEEEeccceee-EEEEEE
Confidence 35566655556688999999865444444566644211000000000000 0122334557789999985 999986
Q ss_pred c--------CCCeeEEECC
Q 019979 121 R--------QGPEFEFKTP 131 (333)
Q Consensus 121 ~--------~s~~~~F~t~ 131 (333)
. .|+...|.|+
T Consensus 81 A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 81 ATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp EEETTBCCCCCCCCEECCC
T ss_pred EEcCCccCCCCCCEEEEcc
Confidence 3 2556667664
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.85 E-value=0.021 Score=48.04 Aligned_cols=68 Identities=21% Similarity=0.200 Sum_probs=39.6
Q ss_pred EEEEeecCCCCCh-hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHh-hhhhhcCCceEEccCCCCCC
Q 019979 139 FAVAGDLGQTGWT-KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGEL-VQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 139 f~~~gD~~~~~~~-~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~-~~~l~~~~P~~~~~GNHD~~ 208 (333)
+.++||+|..-.. ..+++......-.-.|++||+++.+.. ..+.+.-+ .-.+....-++.+.||||..
T Consensus 47 v~VvGDlHG~~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~--slEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 47 VTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYY--SVETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp EEEECBCTTCHHHHHHHHHHHCCTTTSCEEECSCCCCSSSS--HHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred eEEEeeCCCCHHHHHHHHHhcCCCccceEEecCcccCCCCc--ceeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 7899999865321 223333222223458999999987653 22322211 11223335699999999984
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=94.80 E-value=0.023 Score=47.82 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=40.5
Q ss_pred EEEEeecCCCCC-hhhHHHHhhcCCCCeEEccccccccccchhhHHHHHHhh-hhhhcCCceEEccCCCCCC
Q 019979 139 FAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELV-QPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 139 f~~~gD~~~~~~-~~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~-~~l~~~~P~~~~~GNHD~~ 208 (333)
+.++||+|..-. ...+++......-.-.|++||+++.+.. ..+.+.-++ -++...--++...||||..
T Consensus 54 v~VvGDiHG~~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~--slE~i~lL~aLKi~~P~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 54 LKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ--SLETICLLLAYKIKYPENFFLLRGNHECA 123 (294)
T ss_dssp EEEECBCTTCHHHHHHHHHHHCCTTSSCEEECSCCSSSSSC--HHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred eEEEEECCCChHhHHHHHhhcCCCccceEEeeccccCCCcc--chHHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 689999985522 1233333323333458999999986653 334332211 1233335699999999984
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.34 E-value=0.01 Score=42.69 Aligned_cols=74 Identities=19% Similarity=0.285 Sum_probs=44.8
Q ss_pred CCCCCceEEEEec-CCCcEEEEEEcCC------CCCCcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCC
Q 019979 39 PSSHPQQVHISLA-GDSHMRVTWITDD------ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (333)
Q Consensus 39 ~~~~p~~v~l~~~-~~~~~~v~W~t~~------~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 111 (333)
+...|..|.+... +.+++.|+|.-.. ......+.|....+... .. + ..........++|+||+|
T Consensus 10 pp~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~-~~--~------~~~~~~~~~~~~i~~L~~ 80 (117)
T d2cspa1 10 PPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQR-VA--E------VIFPTADSTAVELVRLRS 80 (117)
T ss_dssp CCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSE-EE--E------ECCTTCSEEEEESHHHHH
T ss_pred CCCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeeccc-ce--e------eeeeccceeeeeccCCCC
Confidence 4457888877543 4779999998531 12234666765432111 10 0 001223345678999999
Q ss_pred CCEEEEEeCc
Q 019979 112 DTVYFYRCGR 121 (333)
Q Consensus 112 ~t~Y~Y~v~~ 121 (333)
++.|.+||..
T Consensus 81 ~t~Y~v~V~A 90 (117)
T d2cspa1 81 LEAKGVTVRT 90 (117)
T ss_dssp HTCSCBEEEE
T ss_pred CcEEEEEEEE
Confidence 9999999864
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.28 E-value=0.033 Score=47.50 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=40.2
Q ss_pred eEEEEeecCCCCChhhHHHHhh--cCCC--CeEEccccccccccchhhHHHHHHhh-hhhhcCCceEEccCCCCCC
Q 019979 138 TFAVAGDLGQTGWTKSTLDHIG--QCKY--DVHLLPGDLSYADYMQHRWDTFGELV-QPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 138 ~f~~~gD~~~~~~~~~~~~~i~--~~~~--d~vl~~GDl~~~~~~~~~~~~~~~~~-~~l~~~~P~~~~~GNHD~~ 208 (333)
.+.++||+|..- ..+++-+. ...+ .-.|++||+++.+.. ..+.+.-++ -.+.-.--++.+.||||..
T Consensus 61 pv~VvGDiHGq~--~DL~~if~~~g~p~~~~~ylFLGDYVDRG~~--slEvi~lL~~lKi~yP~~v~LLRGNHE~~ 132 (324)
T d1s95a_ 61 KITVCGDTHGQF--YDLLNIFELNGLPSETNPYIFNGDFVDRGSF--SVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (324)
T ss_dssp EEEEECCCTTCH--HHHHHHHHHHCCCBTTBCEEEESCCSSSSTT--HHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CEEEEEECCCCH--HHHHHHHHHCCCCCCCCeEEEecccccCcCc--ceeehHHHHHHHHhCCCcEEeccCCcccc
Confidence 678899998652 34444332 1222 348999999987653 333332211 1222235699999999984
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.17 E-value=0.035 Score=49.56 Aligned_cols=68 Identities=19% Similarity=0.230 Sum_probs=38.5
Q ss_pred EEEEeecCCCCCh-hhHHHHhhcCCCCeEEccccccccccchhhHHHHHHh-hhhhhcCCceEEccCCCCCC
Q 019979 139 FAVAGDLGQTGWT-KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGEL-VQPLASARPWMVTQGNHEKE 208 (333)
Q Consensus 139 f~~~gD~~~~~~~-~~~~~~i~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~-~~~l~~~~P~~~~~GNHD~~ 208 (333)
+.++||+|..-.. .++++......-.-.|++||+++.+.. ..+.+.-+ .-++...--++.+.||||..
T Consensus 72 v~VvGDIHGq~~DLl~If~~~G~P~~~~yLFLGDYVDRG~~--SlEvlllL~aLKi~yP~~V~LLRGNHE~~ 141 (473)
T d1auia_ 72 VTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYF--SIECVLYLWALKILYPKTLFLLRGNHECR 141 (473)
T ss_dssp EEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSC--HHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred EEEEEeCCCCHHHHHHHHHHcCCCCcceEEecCccccCCcc--cHHHHHHHHHHHHhCCCeEEEeCCCCccH
Confidence 6889999865321 223332222223347899999987653 22222111 11223335699999999963
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.57 E-value=0.03 Score=40.36 Aligned_cols=23 Identities=13% Similarity=-0.091 Sum_probs=18.9
Q ss_pred CeEEEEEeCCCCCCCEEEEEeCc
Q 019979 99 GKIHHTVIGPLEHDTVYFYRCGR 121 (333)
Q Consensus 99 ~~~~~~~l~~L~p~t~Y~Y~v~~ 121 (333)
......+|+||+|+|.|.++|..
T Consensus 79 ~~~~~~~l~~L~p~T~Y~~~V~A 101 (125)
T d2dtge3 79 QNHPGWLMRGLKPWTQYAIFVKT 101 (125)
T ss_dssp SSCCEEEECSCCSSCBCCBEEEE
T ss_pred CccCEEEECCCccCCEEEEEEEE
Confidence 34556789999999999999853
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.90 E-value=0.23 Score=34.90 Aligned_cols=57 Identities=18% Similarity=0.127 Sum_probs=31.7
Q ss_pred cCCCcEEEEEEcCC--CCCCc----EEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEEeCc
Q 019979 51 AGDSHMRVTWITDD--ESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (333)
Q Consensus 51 ~~~~~~~v~W~t~~--~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~ 121 (333)
.+.+++.|.|.... ..... .|+|+........... ... ...+.+|+|++.|.+||..
T Consensus 29 ~~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~~~~~~~-----------~~~---~~~~~~L~p~t~Y~~~V~A 91 (117)
T d1wj3a_ 29 ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN-----------TNK---TSAELVLPIKEDYIIEVKA 91 (117)
T ss_dssp EETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE-----------ESS---SEEEEECCCSSCEEEEEEE
T ss_pred ecCCEEEEEEeecccccCCCceeEEEEEEEecCCCceeeee-----------cee---eEEEeeccCCcEEEEEEEE
Confidence 34789999998532 11112 4555544432211111 111 1234589999999999963
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.76 E-value=0.46 Score=31.89 Aligned_cols=71 Identities=14% Similarity=-0.033 Sum_probs=39.6
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCCcE--EEEeccCCCCCe-eEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESSPSV--VEYGTSPGGYNC-GAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~~~~--v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
.|..|.+... ...+++.|.-....+... +++......... ..... ..........+.+|.+++.|++|
T Consensus 3 ~P~nv~v~s~-n~~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~Y~fR 73 (98)
T d1fyhb1 3 TPTNVTIESY-NMNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACI--------NISHHYCNISDHVGDPSNSLWVR 73 (98)
T ss_dssp CCEEEEEECB-SSCCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEE--------EESSSEEECGGGCCSTTSCEEEE
T ss_pred cCCceEEEEe-CCcEEEEECCCCCCCCCceeEEEEEeccccceeEEeee--------ecccceeeeEecccCCCCEEEEE
Confidence 4777777644 445679999764433332 333332222111 11111 12233445667899999999999
Q ss_pred eCc
Q 019979 119 CGR 121 (333)
Q Consensus 119 v~~ 121 (333)
|..
T Consensus 74 V~A 76 (98)
T d1fyhb1 74 VKA 76 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 974
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.61 E-value=0.19 Score=34.03 Aligned_cols=65 Identities=9% Similarity=0.013 Sum_probs=35.6
Q ss_pred CCceEEEEecC-CCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCC
Q 019979 42 HPQQVHISLAG-DSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (333)
Q Consensus 42 ~p~~v~l~~~~-~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 112 (333)
.|..|.+.... ++.+.|.|....... .-.|+|+............ .... +..|.||
T Consensus 4 PP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~----------~~~t-----~~~L~p~ 68 (94)
T d3d85d3 4 PPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVF----------TDKT-----SATVICR 68 (94)
T ss_dssp CCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEE----------ESSS-----EEEECCC
T ss_pred CCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEecc----------ccce-----EEEecCC
Confidence 68888888765 678999999875321 1256666544332211110 1111 1248899
Q ss_pred CEEEEEeCc
Q 019979 113 TVYFYRCGR 121 (333)
Q Consensus 113 t~Y~Y~v~~ 121 (333)
+.|.+||..
T Consensus 69 ~~Y~v~VRa 77 (94)
T d3d85d3 69 KNASISVRA 77 (94)
T ss_dssp SSCEEEEEE
T ss_pred CCEEEEEEE
Confidence 999999964
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.67 E-value=0.16 Score=38.31 Aligned_cols=32 Identities=25% Similarity=0.151 Sum_probs=24.2
Q ss_pred EEEEEeCCCCCCCEEEEEeCc-----------CCCeeEEECCC
Q 019979 101 IHHTVIGPLEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (333)
Q Consensus 101 ~~~~~l~~L~p~t~Y~Y~v~~-----------~s~~~~F~t~p 132 (333)
....+|+||+|+|.|.++|.. .+....+||.|
T Consensus 154 ~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 154 KESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp CSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred eEEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 345789999999999999853 13456778876
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.03 E-value=0.52 Score=32.00 Aligned_cols=72 Identities=18% Similarity=-0.020 Sum_probs=41.6
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeEEEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 019979 42 HPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (333)
Q Consensus 42 ~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 118 (333)
.|..|.|. ......++.|.-..... .-.|+|.......+..+..-.. .....-...+.+|.++..|++|
T Consensus 6 ~P~nv~~~-s~n~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~c~~-------~t~~~~~~~~~~l~~~~~Y~fR 77 (99)
T d1y6kr1 6 SPPSVWFE-AEFFHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQ-------TLSYDLTAVTLDLYHSNGYRAR 77 (99)
T ss_dssp CCSCEEEE-EETTEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEEES-------SSEEECGGGGTTGGGSSCEEEE
T ss_pred CCCcceEE-EECCEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEeecc-------ccccceeeeeeecCCCCEEEEE
Confidence 37788775 33567889997443322 2478887665444433322110 0000111246789999999999
Q ss_pred eCc
Q 019979 119 CGR 121 (333)
Q Consensus 119 v~~ 121 (333)
|..
T Consensus 78 VrA 80 (99)
T d1y6kr1 78 VRA 80 (99)
T ss_dssp EEE
T ss_pred EEE
Confidence 974
|