Citrus Sinensis ID: 019994

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330--
MIMIHQALCYKRANFWPHVPTKVTQNGVKRHVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
ccEEcccccccccEEcccccHHHHHHHHcccccEEccccccHHHHHHHHHHHccccEEEcccccccccccccccHHHHHHHHHHHHcccHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccHHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcc
ccEEEHHHHHHHcccccccccEEEEccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHHHHHHccEEEEEcccccEEEcccccHHHHHHHHHHHccccHHcHHHHHHHHHHHHHHHHccccEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHEEEccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccc
MIMIHQALCYkranfwphvptkvtqngvkrhVGFMYHSLVEDYFTGFkqlhckgwrsvylnperpqflgtsttnlndslvqgtrwsSGLVQVAISKycpliygpprmslLESMAyadlgmfpllnclplwcfatvpqlcllhgiplypevlsssspIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAeasfsatnkvaddeqvklygmgkfdfrtskmflAPLVTIILLNIAAFVCGAIrstiitgdwdKMFVQISLSFYILVMNYAIIEGMIvrkdngrippsvTLSSALLSGIFLPLVSIILRH
MIMIHQALCykranfwphvPTKVTQNGVKRHVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTggsikiwrnEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLssallsgiflPLVSIILRH
MIMIHQALCYKRANFWPHVPTKVTQNGVKRHVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
**MIHQALCYKRANFWPHVPTKVTQNGVKRHVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIIL**
*IMIH*ALCYKRANFWPHVPTKVTQNGVKRHVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVAD*EQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
MIMIHQALCYKRANFWPHVPTKVTQNGVKRHVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
MIMIHQALCYKRANFWPHVPTKVTQNGVKRHVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
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MIMIHQALCYKRANFWPHVPTKVTQNGVKRHVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILRH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query332 2.2.26 [Sep-21-2011]
Q651X6728 Cellulose synthase-like p yes no 0.879 0.401 0.365 8e-49
Q8VYR4722 Cellulose synthase-like p yes no 0.849 0.390 0.362 5e-48
Q651X7737 Cellulose synthase-like p yes no 0.849 0.382 0.349 8e-47
Q0WVN5751 Cellulose synthase-like p no no 0.855 0.378 0.347 1e-44
Q570S7760 Cellulose synthase-like p no no 0.816 0.356 0.350 5e-44
Q0DXZ1745 Cellulose synthase-like p no no 0.846 0.377 0.357 8e-44
Q8VZK9729 Cellulose synthase-like p no no 0.864 0.393 0.369 2e-41
Q84JA61049 Cellulose synthase A cata no no 0.852 0.269 0.342 3e-40
Q9AV711063 Cellulose synthase A cata no no 0.861 0.269 0.328 4e-40
Q69P511055 Cellulose synthase A cata no no 0.855 0.269 0.324 5e-39
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function desciption
 Score =  194 bits (493), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 109/298 (36%), Positives = 164/298 (55%), Gaps = 6/298 (2%)

Query: 31  HVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLV 90
            +G  Y   VED  TG   +HC+GW SVY+ P+R  F+G +   L  +++Q  RWS G  
Sbjct: 435 EIGVKYGCPVEDVITGL-AIHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWSEGNF 493

Query: 91  QVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEV 150
            + +SK+   ++G  ++SL   M Y   G++   N LP   +  +P L L+ G PL+PE+
Sbjct: 494 TIFLSKHNTFLFGHGKISLQLQMGYCIYGLWAA-NSLPTIYYVMIPALGLVKGTPLFPEI 552

Query: 151 LSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKL 210
           +S  +  F++VF       LYE L +G ++K W N QR+WM++ +T  LYG ++ I   L
Sbjct: 553 MSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMVKRITSYLYGFIDTIRKLL 612

Query: 211 GLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTII 270
           GL++ SF  T KV+D ++ K Y     +F +S      + T+ LLN    V G   S I+
Sbjct: 613 GLSKMSFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIATVALLNFVCLVAGL--SKIM 670

Query: 271 TGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSA--LLSGIFLPLV 326
            G W+    Q+ L   I++ N  I E M VRKD GRIP  VTL+S   ++    LP+V
Sbjct: 671 AGVWNVFLPQVILCGLIVITNIPIYEAMFVRKDKGRIPLPVTLASIGFVMLAFLLPIV 728
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function description
>sp|Q84JA6|CESA4_ARATH Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1 Back     alignment and function description
>sp|Q9AV71|CESA7_ORYSJ Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1 Back     alignment and function description
>sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query332
297737188 822 unnamed protein product [Vitis vinifera] 0.915 0.369 0.612 1e-105
359477392 678 PREDICTED: cellulose synthase-like prote 0.915 0.448 0.612 1e-105
147785659 643 hypothetical protein VITISV_002996 [Viti 0.897 0.463 0.617 1e-104
224111028 857 predicted protein [Populus trichocarpa] 0.888 0.344 0.646 1e-103
359477703 733 PREDICTED: cellulose synthase-like prote 0.915 0.414 0.583 1e-99
255576870 762 cellulose synthase, putative [Ricinus co 0.852 0.371 0.620 4e-99
356535446 740 PREDICTED: cellulose synthase-like prote 0.900 0.404 0.565 3e-90
356548660 736 PREDICTED: cellulose synthase-like prote 0.903 0.407 0.534 5e-86
255576868 711 cellulose synthase, putative [Ricinus co 0.897 0.419 0.524 7e-86
359477705 720 PREDICTED: cellulose synthase-like prote 0.840 0.387 0.567 1e-85
>gi|297737188|emb|CBI26389.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/307 (61%), Positives = 233/307 (75%), Gaps = 3/307 (0%)

Query: 24  TQNGVKRHVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGT 83
            Q    + VGF+Y S++EDY T F  +HC+GW SVY NP +PQFLG+  TN+ND LVQGT
Sbjct: 495 NQTKWGKEVGFLYQSVLEDYLTAFT-MHCRGWTSVYCNPSKPQFLGSGVTNMNDLLVQGT 553

Query: 84  RWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHG 143
           RWSSGL  VAISK+ PLIYGP RMS+LES  YA L  FPL   + +WCF  +PQLCLL+G
Sbjct: 554 RWSSGLFDVAISKFSPLIYGPLRMSILESFCYAYLAYFPLY-FISVWCFGIIPQLCLLNG 612

Query: 144 IPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSL 203
           IPLYP+V  S   IF F+F+S+LSKHLYEVL TGGS + W NEQR WMI+++TC LYGS+
Sbjct: 613 IPLYPKVSDSFFMIFAFIFVSSLSKHLYEVLFTGGSFQTWMNEQRNWMIKSLTCHLYGSM 672

Query: 204 NAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCG 263
           +AIM K+G+ EASF  TNKV D+EQ KLY MGKFDFRTS   LAP+V +++ N+AAF+ G
Sbjct: 673 DAIMKKIGMREASFLTTNKVVDNEQEKLYQMGKFDFRTSTAILAPVVILVISNMAAFMVG 732

Query: 264 AIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFL 323
             R  I  G+WDKMFVQ+ LSFYIL+M+Y I+EGMI+RKD GR+PPS+TL S +L+ + L
Sbjct: 733 LAR-VIAAGNWDKMFVQVVLSFYILIMSYPIVEGMILRKDKGRVPPSITLLSTVLAMVLL 791

Query: 324 PLVSIIL 330
            L S  L
Sbjct: 792 TLGSTAL 798

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359477392|ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147785659|emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224111028|ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359477703|ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255576870|ref|XP_002529321.1| cellulose synthase, putative [Ricinus communis] gi|223531245|gb|EEF33090.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356535446|ref|XP_003536256.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|356548660|ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|255576868|ref|XP_002529320.1| cellulose synthase, putative [Ricinus communis] gi|223531244|gb|EEF33089.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359477705|ref|XP_002280742.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query332
TAIR|locus:2138116722 CSLG2 "AT4G24000" [Arabidopsis 0.846 0.389 0.367 1.9e-48
TAIR|locus:2012050729 CSLE1 "AT1G55850" [Arabidopsis 0.876 0.399 0.372 1.8e-45
TAIR|locus:2138106751 CSLG3 "AT4G23990" [Arabidopsis 0.858 0.379 0.362 1.4e-44
TAIR|locus:2138126760 CSLG1 "AT4G24010" [Arabidopsis 0.816 0.356 0.350 9.1e-44
TAIR|locus:21724571049 CESA4 "cellulose synthase A4" 0.855 0.270 0.340 9.5e-42
TAIR|locus:2124167985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.846 0.285 0.337 1.6e-40
TAIR|locus:21789351026 IRX3 "IRREGULAR XYLEM 3" [Arab 0.840 0.271 0.336 3.7e-40
TAIR|locus:21567891065 CEV1 "CONSTITUTIVE EXPRESSION 0.840 0.261 0.323 3.4e-38
TAIR|locus:21277761081 CESA1 "cellulose synthase 1" [ 0.846 0.259 0.304 3.2e-37
TAIR|locus:20525761088 CESA9 "cellulose synthase A9" 0.837 0.255 0.317 4.2e-37
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 506 (183.2 bits), Expect = 1.9e-48, P = 1.9e-48
 Identities = 107/291 (36%), Positives = 171/291 (58%)

Query:    32 VGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQ 91
             +GF Y SLVEDYFTGF  LHC+GWRS++ +P +  F G S   L D + Q  RWS GL++
Sbjct:   427 IGFRYGSLVEDYFTGF-MLHCEGWRSIFCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLE 485

Query:    92 VAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVL 151
             VA S+Y PL YG   +SLL S+ Y     +P   C+PL  +  +PQ+ L+HG+ ++P+  
Sbjct:   486 VAFSRYNPLTYGIKPLSLLMSLGYCHYAFWPFW-CIPLVVYGILPQVALIHGVSVFPKAS 544

Query:   152 SSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLG 211
                  +++ +FL   ++ L + L  GG+ + W N+QR+WM+R ++   +G     +  L 
Sbjct:   545 DPWFWLYIILFLGGYAQDLSDFLLEGGTYRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLN 604

Query:   212 LAEASFSATNKVADD-EQVKLYGMGKFDFR-TSKMFLAPLVTIILLNIAAFVCGAIRSTI 269
             L+   ++ T+K  DD EQ+K Y    FDF  +S MFL P+ T+ ++N+ AF+ G     I
Sbjct:   605 LSTQGYNVTSKSNDDNEQMKRYEQEIFDFGPSSSMFL-PITTVAIMNLLAFMRGLYG--I 661

Query:   270 ITGDWDK-MFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLS 319
              T  W +   +++ L+ + +V    I E M++R D+G++P  +   + LLS
Sbjct:   662 FT--WGEGPVLELMLASFAVVNCLPIYEAMVLRIDDGKLPKRICFLAGLLS 710
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016740 "transferase activity" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
4th Layer2.4.1.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00020164001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (741 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 1e-78
PLN029151044 PLN02915, PLN02915, cellulose synthase A [UDP-form 6e-53
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 6e-50
PLN021891040 PLN02189, PLN02189, cellulose synthase 5e-49
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 8e-47
PLN02195977 PLN02195, PLN02195, cellulose synthase A 5e-46
PLN024361094 PLN02436, PLN02436, cellulose synthase A 1e-44
PLN024001085 PLN02400, PLN02400, cellulose synthase 2e-44
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 2e-28
PLN02190756 PLN02190, PLN02190, cellulose synthase-like protei 1e-23
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 1e-09
TIGR03030713 TIGR03030, CelA, cellulose synthase catalytic subu 2e-05
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  253 bits (649), Expect = 1e-78
 Identities = 118/305 (38%), Positives = 189/305 (61%), Gaps = 13/305 (4%)

Query: 32  VGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQ 91
           +GF Y SLVEDY+TG+ +L C+GW+S++ NP+RP FLG S  NL+D L Q  RWS GL++
Sbjct: 438 MGFRYGSLVEDYYTGY-RLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLE 496

Query: 92  VAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVL 151
           VA SKY P+ +G   + LL  + YA    +P+   +P+  +A +PQL LL+G+ ++P+  
Sbjct: 497 VAFSKYSPITFGVKSIGLLMGLGYAHYAFWPIW-SIPITIYAFLPQLALLNGVSIFPKA- 554

Query: 152 SSSSPIF---VFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMH 208
             S P F   +F+FL A  + L + L +GG+I+ W N+QR+WMIR ++  L+G +  ++ 
Sbjct: 555 --SDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLK 612

Query: 209 KLGLAEASFSATNKVADDEQVKLYGMGKFDFRT-SKMFLAPLVTIILLNIAAFVCGAIRS 267
            LG++   F+ T+KV D+EQ K Y  G F+F   S MFL PL T  ++N+ +F+ G  + 
Sbjct: 613 TLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFL-PLTTAAIINLVSFLWGIAQ- 670

Query: 268 TIITGDW-DKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLV 326
            I      + +F+Q+ L+ + +V  + I E M++R D+G++P  +TL S +L+       
Sbjct: 671 -IFRQRNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLAS 729

Query: 327 SIILR 331
           S   +
Sbjct: 730 SFAFK 734

Length = 734
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 332
PLN02893734 Cellulose synthase-like protein 100.0
PF03552720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PLN02190756 cellulose synthase-like protein 100.0
PLN02195977 cellulose synthase A 100.0
PLN026381079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN021891040 cellulose synthase 100.0
PLN024001085 cellulose synthase 100.0
PLN024361094 cellulose synthase A 100.0
PLN029151044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN022481135 cellulose synthase-like protein 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK05454691 glucosyltransferase MdoH; Provisional 99.59
PRK14583444 hmsR N-glycosyltransferase; Provisional 99.46
PRK11204420 N-glycosyltransferase; Provisional 99.45
COG1215439 Glycosyltransferases, probably involved in cell wa 99.41
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 99.41
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 99.28
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 99.21
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.06
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.05
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 98.88
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 98.82
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 98.8
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 98.72
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 98.61
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 98.6
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 98.35
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 98.27
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 98.21
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 98.12
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 98.09
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 98.0
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 97.72
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 97.69
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 97.49
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 97.42
KOG2571862 consensus Chitin synthase/hyaluronan synthase (gly 96.46
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 96.15
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 82.27
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 80.24
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information 
Probab=100.00  E-value=3.2e-76  Score=606.25  Aligned_cols=305  Identities=37%  Similarity=0.747  Sum_probs=293.1

Q ss_pred             cccccccccccccCcchhhHHHhHHHHHHCCCeEEecCCCCCccccccCCChHHhhhhhhhhhhhhHHHHHhhcCccccC
Q 019994           24 TQNGVKRHVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG  103 (332)
Q Consensus        24 ~~t~wg~eIG~~~~siTED~~Tg~~~Lh~~GwrsvY~~~~~~af~GlaP~~l~~~l~Qr~RWa~G~~Qi~~~k~~Pl~~~  103 (332)
                      ++|.||+|+||.|||+|||++||++ ||++||||+|++|++++|.|+||+|++++++||+|||+|++||+++|+||++.|
T Consensus       430 ~~t~WG~~~G~~ygsvtED~~Tg~~-lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g  508 (734)
T PLN02893        430 NQTNWGSKMGFRYGSLVEDYYTGYR-LQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFG  508 (734)
T ss_pred             cCCccccccceEeccccccHHHHHH-HHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhc
Confidence            4899999999999999999999999 999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCHhhHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCCcccccccchhHHHHHHHHHHHHHHHHHHHHcCCccccc
Q 019994          104 PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIW  183 (332)
Q Consensus       104 ~~~L~~~Qrl~Y~~~~~y~~~~sl~~l~y~l~P~l~ll~gi~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~w  183 (332)
                      .++|++.||++|++.++|| +.|+|+++|+++|++|+++|++++|+++++++.++++++++.++++++|++++|.++++|
T Consensus       509 ~~~L~~~Qrl~Y~~~~~~~-~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~W  587 (734)
T PLN02893        509 VKSIGLLMGLGYAHYAFWP-IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRW  587 (734)
T ss_pred             ccCCCHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhh
Confidence            7899999999999999999 999999999999999999999999998888988888888888889999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCCchhhhhhhcCcceeeccchhhHHHHHHHHHHHHHHHHHH
Q 019994          184 RNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCG  263 (332)
Q Consensus       184 w~~qr~~~i~~~~~~~~a~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~P~~~l~~l~l~alv~g  263 (332)
                      ||+||+|+|.++++++++++++++|.+|+++.+|+||+|+.++++.++|++|.|+|+.++++++|.++++++|++|+++|
T Consensus       588 Wn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~G  667 (734)
T PLN02893        588 WNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWG  667 (734)
T ss_pred             cchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998877778999999999966999999999999999999999


Q ss_pred             HhhhheecCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHhhhhhc
Q 019994          264 AIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKDNGRIPPSVTLSSALLSGIFLPLVSIILR  331 (332)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~w~v~~l~p~~~~l~~r~~k~~~P~~~~~~s~~~~~~~~~~~~~~~~  331 (332)
                      +++. +.++.++.+++++++++|++++++|+++|+++||||+++|+|++++|++|+.++|.++|+++|
T Consensus       668 i~~~-~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~~~~  734 (734)
T PLN02893        668 IAQI-FRQRNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLASSFAFK  734 (734)
T ss_pred             HHHH-HhCCchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHhhhcC
Confidence            9998 766678888999999999999999999999999999999999999999999999999999876

>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
4hg6_A 802 Structure Of A Cellulose Synthase - Cellulose Trans 4e-04
>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 Back     alignment and structure 
Iteration: 1

 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 4   IHQALCYKRANFWPHVPTKVTQNGVKRHVGFMYHSLVEDYFTGFKQLHCKGWRSVYLNPE 63
           IH+ L      F+      + +  +    GF   ++ ED  T   ++H +GW+S+Y++  
Sbjct: 305 IHRGLDRWGGAFFCGSAAVLRRRALDEAGGFAGETITEDAETAL-EIHSRGWKSLYID-- 361
Query: 64  RPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG---PPRMSLLESMAYADLGM 120
           R    G         + Q  RW++G++Q+ + K      G     R+  L SM++     
Sbjct: 362 RAMIAGLQPETFASFIQQRGRWATGMMQMLLLKNPLFRRGLGIAQRLCYLNSMSF---WF 418
Query: 121 FPLLNCLPLWCFATVPQLCLLHGIPLY 147
           FPL+  +    F   P + L  GI ++
Sbjct: 419 FPLVRMM----FLVAPLIYLFFGIEIF 441

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query332
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 99.94
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 95.97
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 89.12
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 87.37
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 83.03
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=99.94  E-value=1.7e-25  Score=237.12  Aligned_cols=249  Identities=16%  Similarity=0.244  Sum_probs=178.7

Q ss_pred             ccccccccccc-cccCcchhhHHHhHHHHHHCCCeEEecCCCCCccccccCCChHHhhhhhhhhhhhhHHHHHhhcCccc
Q 019994           23 VTQNGVKRHVG-FMYHSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI  101 (332)
Q Consensus        23 ~~~t~wg~eIG-~~~~siTED~~Tg~~~Lh~~GwrsvY~~~~~~af~GlaP~~l~~~l~Qr~RWa~G~~Qi~~~k~~Pl~  101 (332)
                      +++... +++| |++++++||.+++.+ ++++|||++|+++....  +.+|+|+.++++||.||++|.+|+++ +++|+.
T Consensus       324 ~Rr~al-~~vGgf~~~~~~ED~~l~~r-l~~~G~ri~~~~~~~~~--~~~p~t~~~~~~Qr~RW~~G~~q~l~-~~~pl~  398 (802)
T 4hg6_A          324 LRRRAL-DEAGGFAGETITEDAETALE-IHSRGWKSLYIDRAMIA--GLQPETFASFIQQRGRWATGMMQMLL-LKNPLF  398 (802)
T ss_dssp             EEHHHH-HHHTTCCCSSSSHHHHHHHH-HHTTTCCEEECCCCCEE--ECCCCSHHHHHHHHHHHHHHHHHHHH-HSCTTS
T ss_pred             hhHHHH-HHcCCcCCCCcchHHHHHHH-HHHcCCeEEEecCCEEE--ecCCCCHHHHHHHHHHHHccHHHHHH-HhCccc
Confidence            455555 5777 999999999999999 99999999999876654  99999999999999999999999997 458988


Q ss_pred             cCCCCCCHhhHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCCcccccccchhHHHHHHHHHHHHHHH--HHHHHcCCc
Q 019994          102 YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHL--YEVLSTGGS  179 (332)
Q Consensus       102 ~~~~~L~~~Qrl~Y~~~~~y~~~~sl~~l~y~l~P~l~ll~gi~~~~~~~~~~~~~~~~~~~~~~~~~l--l~~~~~g~~  179 (332)
                      .  +++++.||++|+++..++ +.+++.++++++|++++++|+.++......++.+    ++++.+...  ......+. 
T Consensus       399 ~--~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~----~lp~~l~~~~~~~~~~~~~-  470 (802)
T 4hg6_A          399 R--RGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAY----MPGYLAVSFLVQNALFARQ-  470 (802)
T ss_dssp             C--SSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHH----HHHHHHHHHHHHHHHHTTT-
T ss_pred             c--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHH----HHHHHHHHHHHHHHHhcCc-
Confidence            7  899999999999999999 8899999999999999999998876533222222    222222111  11222111 


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCCchhhhhhhcCcceeeccchhhHHHHHHHHHHHHHH
Q 019994          180 IKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAA  259 (332)
Q Consensus       180 ~~~ww~~qr~~~i~~~~~~~~a~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~P~~~l~~l~l~a  259 (332)
                      -..||.     .+......++.+...+...+++++.+|+||+|+.+.++.        .+   +....|+++++++++++
T Consensus       471 r~~~~~-----~l~~~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~--------~~---~~~~~p~~~~~~l~~~~  534 (802)
T 4hg6_A          471 RWPLVS-----EVYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSEN--------YI---SPIYRPLLFTFLLCLSG  534 (802)
T ss_dssp             SCTTHH-----HHHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSSC--------CB---CTTCHHHHHHHHHHHHH
T ss_pred             HHHHHH-----HHHHHHHHHHHHHHHHHHHhCCCCCcceECCCCcccccc--------ch---hhHHHHHHHHHHHHHHH
Confidence            112222     222232333333444455568899999999999865431        11   26778999999999999


Q ss_pred             HHHHHhhhheecCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 019994          260 FVCGAIRSTIITGDWDKMFVQISLSFYILVMNYAIIEGMIVRKD  303 (332)
Q Consensus       260 lv~g~~~~~~~~~~~~~~~~~~~~~~w~v~~l~p~~~~l~~r~~  303 (332)
                      +++++++. ...+  ......++.+.|.++|++.+..++....+
T Consensus       535 ~~~~~~~~-~~~~--~~~~~~~~~~~w~~~~l~~l~~~~~~~~~  575 (802)
T 4hg6_A          535 VLATLVRW-VAFP--GDRSVLLVVGGWAVLNVLLVGFALRAVAE  575 (802)
T ss_dssp             HHHHHHHH-HHCG--GGHHHHHHHHHHHHHHHHHHHHHHTTTBC
T ss_pred             HHHHHHHH-hccC--CccchhhhhhHHHHHHHHHHHHHHHHHhc
Confidence            99999987 5332  12234456677777777777777654433
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00