Citrus Sinensis ID: 020022

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330--
Protein Sequence
MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCLS
Secondary Structure (PSIPRED)
ccccccEEEEEccccHHHHHHHHHHHHcccccccccEEEEEEccccHHHHHHHHHHHHHcccccccccEEEEccHHHHcccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHccccccccEEEEHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccEEEEccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccEEEEEEEEEEccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccEEEEEcccccHHHHHHHHHHHccccccccccEEEEEEccHHHHHHHHHHHHHHHccccccEEEEEEEccHHHHHccccEEEEcccccccccccccccccccHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHcccccccccEEEccHHHHHHHHHHHHHHHcccHHHEEccEEEEccccccEEEccccEEEEccEEccHHHHHccHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccEEEEEEccccHHcccccEEEEEEEEEccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MAKEPVRVLVTGAAGQIGYALVPMIARgvmlgtdqpvilhmldippaaealnGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMvggfprkegmerkdvmsKNVSIYKAQASALeqhaapnckVLVVANPANTNALIlkefapsipaknitcltrldhnralgqiseklnvqvsDVKNVIIWgnhsssqypdvnhatvntaagekpvRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSAcdhirdwvlgtpegtwvsmgvysdgsynvpagliysfpvtcrngewtivQGLSIDEFSRKKLDLTAEELSEEKALAYSCLS
Flexible Loop (DISEMBL)
MAKEPVRVLVtgaagqigyALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNhsssqypdvnHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAeelseekalayscls
Low Complexity Region (SEG)
MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKlssalsaassaCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCLS
Disordered region (IsUnstruct)
*****VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPR************NVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSR**********************
Disordered Region (DISOPRED)
***EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCLS
Disordered Region (DISEMBL)
MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA*************CDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEE*************
Disordered Region (DISPRO)
***EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSA*SSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCLS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	332	2.2.26 [Sep-21-2011]
O48905	332	Malate dehydrogenase, cyt	N/A	no	1.0	1.0	0.921	1e-176
Q08062	332	Malate dehydrogenase, cyt	N/A	no	0.996	0.996	0.918	1e-176
P93819	332	Malate dehydrogenase, cyt	yes	no	1.0	1.0	0.912	1e-176
P57106	332	Malate dehydrogenase, cyt	no	no	1.0	1.0	0.921	1e-176
Q7XDC8	332	Malate dehydrogenase, cyt	yes	no	1.0	1.0	0.903	1e-174
O24047	332	Malate dehydrogenase, cyt	N/A	no	1.0	1.0	0.909	1e-173
Q9SML8	332	Malate dehydrogenase, cyt	N/A	no	1.0	1.0	0.897	1e-170
P11708	334	Malate dehydrogenase, cyt	yes	no	0.990	0.985	0.609	1e-114
P40925	334	Malate dehydrogenase, cyt	yes	no	0.990	0.985	0.603	1e-114
O88989	334	Malate dehydrogenase, cyt	yes	no	0.990	0.985	0.609	1e-114

>sp|O48905|MDHC_MEDSA Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1

 Score =  618 bits (1593), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 306/332 (92%), Positives = 322/332 (96%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAK+PVRVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDI PAAE+LNGVKMELVD
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIAPAAESLNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTD VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+H
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AA NCKVLVVANPANTNALILKEFAPSIP +NI+CLTRLDHNRALGQISE+LNVQVSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLNVQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSS+QYPDVNHATVNT AGEKPVR+LV DDAWLNGEFI+TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVNTPAGEKPVRQLVSDDAWLNGEFISTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAAS+ACDHIRDWVLGTP+GT+VSMGVYSDGSYNVP+GLIYSFPVTC NGEW IV
Sbjct: 241 LSSALSAASAACDHIRDWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGLSIDEFSRKKLDLTAEEL+EEK LA+SCLS
Sbjct: 301 QGLSIDEFSRKKLDLTAEELTEEKNLAHSCLS 332

Medicago sativa (taxid: 3879)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 7

>sp|Q08062|MDHC_MAIZE Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2

 Score =  617 bits (1591), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 304/331 (91%), Positives = 315/331 (95%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAKEP+RVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAKEPMRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTD VEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE H
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AAPNCKVLVVANPANTNALILKEFAPSIP KN+TCLTRLDHNRALGQISE+LNVQVSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNVTCLTRLDHNRALGQISERLNVQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSSQYPDVNHATV T+ GEKPVRELV DD WLNGEFITTVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHATVKTSTGEKPVRELVSDDEWLNGEFITTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
            SSALSAASSACDHIRDWVLGTPEGT+VSMGVYSDGSY VP+GLIYSFPVTC  GEW IV
Sbjct: 241 FSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGEWKIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCL 331
           QGL IDEFSRKK+D TA+EL+EEK LAYSCL
Sbjct: 301 QGLPIDEFSRKKMDATAQELTEEKTLAYSCL 331

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|P93819|MDHC1_ARATH Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2

 Score =  616 bits (1588), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 303/332 (91%), Positives = 322/332 (96%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAKEPVRVLVTGAAGQIGYALVPMIARG+MLG DQPVILHMLDIPPAAEALNGVKMEL+D
Sbjct: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELID 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTDAVE CTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QA+ALE+H
Sbjct: 61  AAFPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AAPNCKVLVVANPANTNALILKEFAPSIP KNI+CLTRLDHNRALGQISE+L+V VSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLSVPVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSSQYPDVNHA V T++GEKPVRELVKDDAWL+GEFI+TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHAKVQTSSGEKPVRELVKDDAWLDGEFISTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAASSACDHIRDWVLGTPEGT+VSMGVYSDGSY+VP+GLIYSFPVTCRNG+W+IV
Sbjct: 241 LSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGL IDE SRKK+DLTAEEL EEK LAYSCLS
Sbjct: 301 QGLPIDEVSRKKMDLTAEELKEEKDLAYSCLS 332

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|P57106|MDHC2_ARATH Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1

 Score =  615 bits (1587), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 306/332 (92%), Positives = 321/332 (96%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAKEPVRVLVTGAAGQIGYALVPMIARG+MLG DQPVILHMLDIP AAEALNGVKMELVD
Sbjct: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTDAVEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+H
Sbjct: 61  AAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AAPNCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQ+SE+L+V VSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSS+QYPDVNHATV T+ GEKPVRELVK+D WLNGEFI+TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVKTSVGEKPVRELVKNDEWLNGEFISTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAASSACDHIRDWV+GTPEGT+VSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV
Sbjct: 241 LSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGL ID+ SRKK+DLTAEEL EEK LAYSCLS
Sbjct: 301 QGLPIDDASRKKMDLTAEELKEEKDLAYSCLS 332

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q7XDC8|MDHC_ORYSJ Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3

 Score =  609 bits (1571), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 300/332 (90%), Positives = 314/332 (94%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAKEP+RVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPA E+LNG+KMELVD
Sbjct: 1   MAKEPMRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPATESLNGLKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKG+VATTD VEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE H
Sbjct: 61  AAFPLLKGIVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AAPNCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQISEKLNVQV+DVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISEKLNVQVTDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           N IIWGNHSS+QYPDVNHATV T +GEKPVRELV DD WLN EFI+TVQQRGAAIIKARK
Sbjct: 181 NAIIWGNHSSTQYPDVNHATVKTPSGEKPVRELVADDEWLNTEFISTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
            SSALSAASSACDHIRDWVLGTPEGT+VSMGVYSDGSY VPAGLIYSFPVTC  GEWTIV
Sbjct: 241 QSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPAGLIYSFPVTCSGGEWTIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGL IDEFSRKK+D TA+ELSEEK LAYSCL+
Sbjct: 301 QGLPIDEFSRKKMDATAQELSEEKTLAYSCLN 332

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|O24047|MDHC_MESCR Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1

 Score =  608 bits (1567), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 302/332 (90%), Positives = 315/332 (94%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MA EP+RVLVTGAAGQIGYALVPMIARG+MLG +QPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAVEPLRVLVTGAAGQIGYALVPMIARGIMLGANQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTDA EAC GVN+AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH
Sbjct: 61  AAFPLLKGVVATTDAAEACKGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AAPNCKVLVVANPANTNALILKEFAPSIP KNI+CLTRLDHNRALGQISE+LNVQVSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNVQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSS+QYPDVNHATV T   +KPVRELV DDAWLNGEFITTVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVKTQGVDKPVRELVADDAWLNGEFITTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAASSACDHI DWVLGTPEGTWVSMGVYSDGSYNVPAG+IYSFPVTC+NGEWTIV
Sbjct: 241 LSSALSAASSACDHIHDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKNGEWTIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGL ID+ SRKK+D TA EL EEK LAYSCL+
Sbjct: 301 QGLPIDDDSRKKMDATAAELVEEKTLAYSCLT 332

Mesembryanthemum crystallinum (taxid: 3544)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q9SML8|MDHC_BETVU Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1

 Score =  597 bits (1540), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 298/332 (89%), Positives = 311/332 (93%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MA EP+RVLVTGAAGQIGYALVPMIARGVMLG +QPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAVEPLRVLVTGAAGQIGYALVPMIARGVMLGANQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTD  EAC GVN+AVMVGGFPRKEGMERKDVM KNVSIYK+QASALEQ+
Sbjct: 61  AAFPLLKGVVATTDVAEACKGVNVAVMVGGFPRKEGMERKDVMPKNVSIYKSQASALEQY 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AAPNCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQISE+LN QVSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNAQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSSQYPDVN  TV T +GEK VRELV DDAWLNGEFITTVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNPCTVKTGSGEKAVRELVADDAWLNGEFITTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAG+IYSFPVTC++GEW IV
Sbjct: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKDGEWKIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGL IDE SR+K+D T  EL EEKALAYSCL+
Sbjct: 301 QGLPIDEVSRQKMDATGAELVEEKALAYSCLT 332

Beta vulgaris (taxid: 161934)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|P11708|MDHC_PIG Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4

 Score =  413 bits (1061), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/330 (60%), Positives = 248/330 (75%), Gaps = 1/330 (0%)

Query: 4   EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
           EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct: 3   EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 62

Query: 64  PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
           PLLK V+AT     A   +++A++VG  PR++GMERKD++  NV I+K Q +AL+++A  
Sbjct: 63  PLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKK 122

Query: 124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
           + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V   DVKNVI
Sbjct: 123 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVI 182

Query: 184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS 243
           IWGNHSS+QYPDVNHA V   A E  V E VKDD+WL GEFITTVQQRGAA+IKARKLSS
Sbjct: 183 IWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARKLSS 242

Query: 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
           A+SAA + CDH+RD   GTPEG +VSMG+ SDG SY VP  L+YSFPVT ++  W IV+G
Sbjct: 243 AMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEG 302

Query: 303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           L I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct: 303 LPINDFSREKMDLTAKELAEEKETAFEFLS 332

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|P40925|MDHC_HUMAN Malate dehydrogenase, cytoplasmic OS=Homo sapiens GN=MDH1 PE=1 SV=4

 Score =  411 bits (1056), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/330 (60%), Positives = 247/330 (74%), Gaps = 1/330 (0%)

Query: 4   EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
           EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct: 3   EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 62

Query: 64  PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
           PLLK V+AT     A   +++A++VG  PR+EGMERKD++  NV I+K+Q +AL+++A  
Sbjct: 63  PLLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKK 122

Query: 124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
           + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V  +DVKNVI
Sbjct: 123 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVI 182

Query: 184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS 243
           IWGNHSS+QYPDVNHA V     E  V E +KDD+WL GEF+TTVQQRGAA+IKARKLSS
Sbjct: 183 IWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLSS 242

Query: 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
           A+SAA + CDH+RD   GTPEG +VSMGV SDG SY VP  L+YSFPV  +N  W  V+G
Sbjct: 243 AMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEG 302

Query: 303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           L I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct: 303 LPINDFSREKMDLTAKELTEEKESAFEFLS 332

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|O88989|MDHC_RAT Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus GN=Mdh1 PE=1 SV=3

 Score =  410 bits (1054), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/330 (60%), Positives = 245/330 (74%), Gaps = 1/330 (0%)

Query: 4   EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
           EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct: 3   EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 62

Query: 64  PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
           PLL+ V+AT     A   +++AV+VG  PR+EGMERKD++  NV I+K+Q +ALE++A  
Sbjct: 63  PLLQDVIATDKEEVAFKDLDVAVLVGSMPRREGMERKDLLKANVKIFKSQGAALEKYAKK 122

Query: 124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
           + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V   DVKNVI
Sbjct: 123 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDVKNVI 182

Query: 184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS 243
           IWGNHSS+QYPDVNHA V     E  V E +KDD+WL GEFITTVQQRGAA+IKARKLSS
Sbjct: 183 IWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFITTVQQRGAAVIKARKLSS 242

Query: 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
           A+SAA +  DHIRD   GTPEG +VSMGV SDG SY VP  L+YSFPV  +N  W  V+G
Sbjct: 243 AMSAAKAISDHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEG 302

Query: 303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           L I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct: 303 LPINDFSREKMDLTAKELTEEKETAFEFLS 332

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	332
211906490	332	malate dehydrogenase [Gossypium hirsutum	1.0	1.0	0.951	0.0
10798652	332	malate dehydrogenase [Nicotiana tabacum]	1.0	1.0	0.942	1e-178
224112569	332	predicted protein [Populus trichocarpa]	1.0	1.0	0.948	1e-178
83283965	332	malate dehydrogenase-like protein [Solan	1.0	1.0	0.942	1e-178
224102193	332	predicted protein [Populus trichocarpa]	1.0	1.0	0.948	1e-177
328908589	332	cytosolic malate dehydrogenase [Lupinus	1.0	1.0	0.939	1e-177
347516612	332	Cr611 [Catharanthus roseus]	1.0	1.0	0.930	1e-177
15982948	332	NAD-dependent malate dehydrogenase [Prun	1.0	1.0	0.933	1e-176
255585546	332	malate dehydrogenase, putative [Ricinus	1.0	1.0	0.930	1e-176
78216493	332	cytosolic malate dehydrogenase [Malus x	1.0	1.0	0.927	1e-176

>gi|211906490|gb|ACJ11738.1| malate dehydrogenase [Gossypium hirsutum]

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/332 (95%), Positives = 325/332 (97%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAKEPVRVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTD VEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QASALEQH
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEQH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSSQYPDVNHATV T +GEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHATVMTPSGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAAS+ACDHIRDWVLGTPEGTWVSMGVYSDGSYN PAG+IYSFPVTC+NGEWTIV
Sbjct: 241 LSSALSAASAACDHIRDWVLGTPEGTWVSMGVYSDGSYNAPAGVIYSFPVTCKNGEWTIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGL+IDEFSRKKLDLT +EL+EEK LAYSCLS
Sbjct: 301 QGLAIDEFSRKKLDLTGQELTEEKELAYSCLS 332

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10798652|emb|CAC12826.1| malate dehydrogenase [Nicotiana tabacum]

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 313/332 (94%), Positives = 324/332 (97%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAK+PVRVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTDAVEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+H
Sbjct: 61  AAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AAPNCKVLVVANPANTNALILKE+APSIP KNI+CLTRLDHNRALGQISE+LNVQVSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEYAPSIPEKNISCLTRLDHNRALGQISERLNVQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSSQYPDVNHATV T AGEKPVRELV DDAWLNGEFI+TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHATVATPAGEKPVRELVADDAWLNGEFISTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPV C+NGEW+IV
Sbjct: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVACKNGEWSIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGL IDEFSRKKLD TAEELSEEKALAYSCL+
Sbjct: 301 QGLPIDEFSRKKLDATAEELSEEKALAYSCLT 332

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112569|ref|XP_002332745.1| predicted protein [Populus trichocarpa] gi|222833073|gb|EEE71550.1| predicted protein [Populus trichocarpa]

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 315/332 (94%), Positives = 322/332 (96%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAKEP RVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAKEPARVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTD VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+H
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AA NCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQISE+LNVQVSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNVQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSS+QYPDVNHATV T AGEKPVRELVKDDAWLN EFITTVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVKTPAGEKPVRELVKDDAWLNAEFITTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAASSACDHI DWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC+NGEW IV
Sbjct: 241 LSSALSAASSACDHIHDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCQNGEWKIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGLSIDEFSRKKLDLTA+ELSEEKALAYSCL+
Sbjct: 301 QGLSIDEFSRKKLDLTADELSEEKALAYSCLT 332

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|83283965|gb|ABC01890.1| malate dehydrogenase-like protein [Solanum tuberosum]

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 313/332 (94%), Positives = 325/332 (97%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAK+PVRVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTDAVEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+H
Sbjct: 61  AAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AAPNCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQISE+L+VQVSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLSVQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSSQYPDVNHATV T AG+KPVRELV DDAWLNGEFI+TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHATVTTPAGDKPVRELVADDAWLNGEFISTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAASSACDHIRDWVLGTPEGT+VSMGVYSDGSYNVPAGLIYSFPVTC+NGEW+IV
Sbjct: 241 LSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCKNGEWSIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           Q L IDEFSRKKLDLTAEELSEEKALAYSCL+
Sbjct: 301 QDLPIDEFSRKKLDLTAEELSEEKALAYSCLT 332

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102193|ref|XP_002312583.1| predicted protein [Populus trichocarpa] gi|118481649|gb|ABK92766.1| unknown [Populus trichocarpa] gi|222852403|gb|EEE89950.1| predicted protein [Populus trichocarpa]

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 315/332 (94%), Positives = 321/332 (96%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAKEPVRVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTD VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+H
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AA NCKVLVVANPANTNALILKEFAPSI  KNITCLTRLDHNRALGQISE+L+VQV DVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSISEKNITCLTRLDHNRALGQISERLSVQVCDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSSQYPDVNHATV T AGEKPVRELVKDD WLN EFITTVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHATVKTPAGEKPVRELVKDDEWLNAEFITTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC+NGEW IV
Sbjct: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCQNGEWKIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGLSIDEFSRKKLDLTA+ELSEEKALAYSCLS
Sbjct: 301 QGLSIDEFSRKKLDLTADELSEEKALAYSCLS 332

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|328908589|gb|AEB60994.1| cytosolic malate dehydrogenase [Lupinus angustifolius]

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 312/332 (93%), Positives = 323/332 (97%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAK+PVRVLVTGAAGQIGYALVPMIARGVMLG+DQPVILH+LDIPPAAE+LNGVKMELVD
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGSDQPVILHLLDIPPAAESLNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+H
Sbjct: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AA NCKVLVVANPANTNALILKEFAPSIP KNI+CLTRLDHNRALGQISE+LNVQVSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNVQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSSQYPDVNHATV T AGEKPVRELV DDAWLN EFI TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHATVTTPAGEKPVRELVADDAWLNSEFIATVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAAS+ACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVT +NGEW IV
Sbjct: 241 LSSALSAASAACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTTQNGEWKIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGL+IDEFSRKKLDLTAEELSEEKALAYSCLS
Sbjct: 301 QGLAIDEFSRKKLDLTAEELSEEKALAYSCLS 332

Source: Lupinus angustifolius

Species: Lupinus angustifolius

Genus: Lupinus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|347516612|gb|AEO99201.1| Cr611 [Catharanthus roseus]

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 309/332 (93%), Positives = 321/332 (96%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAKEPVRVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTD  EAC GVNIAVMVGGFPRKEGMERKDVMSKNVSIYK+QASALEQ+
Sbjct: 61  AAFPLLKGVVATTDVAEACAGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEQY 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AAPNCKVL VANPANTNALILKEFAPSIPAKN+TCLTRLDHNRALGQISE+LNV VS+VK
Sbjct: 121 AAPNCKVLFVANPANTNALILKEFAPSIPAKNVTCLTRLDHNRALGQISERLNVPVSEVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSS+QYPDVNHATV T+AGEKPVRELVKDD WLNGEFITTVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVKTSAGEKPVRELVKDDEWLNGEFITTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAAS+ACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC+NGEWT+V
Sbjct: 241 LSSALSAASAACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCKNGEWTVV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGL IDE SRKK+D TAEELSEEKALAYSCL+
Sbjct: 301 QGLPIDELSRKKMDSTAEELSEEKALAYSCLT 332

Source: Catharanthus roseus

Species: Catharanthus roseus

Genus: Catharanthus

Family: Apocynaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15982948|gb|AAL11502.1|AF367442_1 NAD-dependent malate dehydrogenase [Prunus persica]

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 310/332 (93%), Positives = 319/332 (96%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAK PVRVLVTGAAGQIGYALVPMIARGVMLG DQPVILH+LDIPPAAEALNGVKMELVD
Sbjct: 1   MAKGPVRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHLLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTD VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+H
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AA NCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQ+SE+LNVQVSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLNVQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSSQYPDVNHATV T +GEK VRELV DDAWL GEFITTVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHATVKTPSGEKAVRELVADDAWLTGEFITTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LS ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVP+GLIYSFPVTC+NGEW IV
Sbjct: 241 LSRALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPSGLIYSFPVTCQNGEWKIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGLSIDEFSRKKLD TA+ELSEEKALAYSCLS
Sbjct: 301 QGLSIDEFSRKKLDATADELSEEKALAYSCLS 332

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585546|ref|XP_002533463.1| malate dehydrogenase, putative [Ricinus communis] gi|223526678|gb|EEF28915.1| malate dehydrogenase, putative [Ricinus communis]

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 309/332 (93%), Positives = 323/332 (97%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAKEPVRVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMELVD
Sbjct: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTD VEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+H
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AA NCKVLVVANPANTNALIL+EFAPSIP KNITCLTRLDHNRALGQISE+LNVQVSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILREFAPSIPEKNITCLTRLDHNRALGQISERLNVQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSS+QYPDVNHATV T +GEKPV+ELV DDAWL+G+FI+TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVKTPSGEKPVKELVNDDAWLHGDFISTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAASSACDHIR+WVLGTPEGTWVSMGVYSDGSYNVP+GLIYSFPVTC+NGEW IV
Sbjct: 241 LSSALSAASSACDHIRNWVLGTPEGTWVSMGVYSDGSYNVPSGLIYSFPVTCQNGEWKIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGLSIDEFSRKKLD TAEELSEEKALAYSCLS
Sbjct: 301 QGLSIDEFSRKKLDSTAEELSEEKALAYSCLS 332

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|78216493|gb|ABB36659.1| cytosolic malate dehydrogenase [Malus x domestica]

 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 308/332 (92%), Positives = 323/332 (97%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAKEPVRVLVTGAAGQIGYALVPMIARG+MLG DQPVILH+LDIPPAAEALNGVKMELVD
Sbjct: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHLLDIPPAAEALNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           AAFPLLKGVVATTD VEACTGVNIAVMVGGFPRKEGMERKDVM+KNVSIYK+QASALE+H
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           AAPNCKVLVVANPANTNALILKEFAPSIP KN+TCLTRLDHNRALGQ+SE+LNVQVSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNVTCLTRLDHNRALGQVSERLNVQVSDVK 180

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSSQYPDVNHATV T +GEK VRELV DDAWLNGEFI+TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHATVKTPSGEKCVRELVADDAWLNGEFISTVQQRGAAIIKARK 240

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
           LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY+VP+GLI+SFPVTC++GEW IV
Sbjct: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYDVPSGLIFSFPVTCQHGEWKIV 300

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           QGLSIDEFSRKKLD TAEELSEEKALAYSCLS
Sbjct: 301 QGLSIDEFSRKKLDATAEELSEEKALAYSCLS 332

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	332
TAIR|locus:2176441	332	c-NAD-MDH2 "cytosolic-NAD-depe	1.0	1.0	0.888	3.3e-157
TAIR|locus:2018244	332	c-NAD-MDH1 "cytosolic-NAD-depe	1.0	1.0	0.879	1.1e-156
TAIR|locus:2165066	339	c-NAD-MDH3 "cytosolic-NAD-depe	0.993	0.973	0.715	2.8e-130
UNIPROTKB|P11708	334	MDH1 "Malate dehydrogenase, cy	0.990	0.985	0.587	5e-99
UNIPROTKB|P40925	334	MDH1 "Malate dehydrogenase, cy	0.990	0.985	0.581	1.7e-98
UNIPROTKB|Q3T145	334	MDH1 "Malate dehydrogenase, cy	0.990	0.985	0.572	9.4e-98
UNIPROTKB|E2QV08	348	MDH1 "Malate dehydrogenase" [C	0.990	0.945	0.575	9.4e-98
MGI|MGI:97051	334	Mdh1 "malate dehydrogenase 1,	0.990	0.985	0.587	9.4e-98
RGD|3072	334	Mdh1 "malate dehydrogenase 1,	0.990	0.985	0.587	9.4e-98
UNIPROTKB|Q5ZME2	334	MDH1 "Malate dehydrogenase, cy	0.990	0.985	0.572	2.2e-96

TAIR|locus:2176441 c-NAD-MDH2 "cytosolic-NAD-dependent malate dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1532 (544.3 bits), Expect = 3.3e-157, P = 3.3e-157
 Identities = 295/332 (88%), Positives = 310/332 (93%)

Query:     1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
             MAKEPVRVLVTGAAGQIGYALVPMIARG+MLG DQPVILHMLDIP AAEALNGVKMELVD
Sbjct:     1 MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVD 60

Query:    61 AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
             AAFPLLKGVVATTDAVEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+H
Sbjct:    61 AAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query:   121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
             AAPNCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQ+SE+L+V VSDVK
Sbjct:   121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVK 180

Query:   181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
             NVIIWGNHSS+QYPDVNHATV T+ GEKPVRELVK+D WLNGEFI+TVQQRGAAIIKARK
Sbjct:   181 NVIIWGNHSSTQYPDVNHATVKTSVGEKPVRELVKNDEWLNGEFISTVQQRGAAIIKARK 240

Query:   241 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
                        CDHIRDWV+GTPEGT+VSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV
Sbjct:   241 LSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300

Query:   301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
             QGL ID+ SRKK+DLTAEEL EEK LAYSCLS
Sbjct:   301 QGLPIDDASRKKMDLTAEELKEEKDLAYSCLS 332

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2018244 c-NAD-MDH1 "cytosolic-NAD-dependent malate dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
 Identities = 292/332 (87%), Positives = 311/332 (93%)

Query:     1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
             MAKEPVRVLVTGAAGQIGYALVPMIARG+MLG DQPVILHMLDIPPAAEALNGVKMEL+D
Sbjct:     1 MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELID 60

Query:    61 AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
             AAFPLLKGVVATTDAVE CTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QA+ALE+H
Sbjct:    61 AAFPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKH 120

Query:   121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
             AAPNCKVLVVANPANTNALILKEFAPSIP KNI+CLTRLDHNRALGQISE+L+V VSDVK
Sbjct:   121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLSVPVSDVK 180

Query:   181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
             NVIIWGNHSSSQYPDVNHA V T++GEKPVRELVKDDAWL+GEFI+TVQQRGAAIIKARK
Sbjct:   181 NVIIWGNHSSSQYPDVNHAKVQTSSGEKPVRELVKDDAWLDGEFISTVQQRGAAIIKARK 240

Query:   241 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
                        CDHIRDWVLGTPEGT+VSMGVYSDGSY+VP+GLIYSFPVTCRNG+W+IV
Sbjct:   241 LSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIV 300

Query:   301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
             QGL IDE SRKK+DLTAEEL EEK LAYSCLS
Sbjct:   301 QGLPIDEVSRKKMDLTAEELKEEKDLAYSCLS 332

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0009507 "chloroplast" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0010043 "response to zinc ion" evidence=IEP

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

TAIR|locus:2165066 c-NAD-MDH3 "cytosolic-NAD-dependent malate dehydrogenase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1278 (454.9 bits), Expect = 2.8e-130, P = 2.8e-130
 Identities = 236/330 (71%), Positives = 277/330 (83%)

Query:     3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
             K+P+RVL+TGAAG IGYA+ PMIARG+MLG DQP+ILH+LDI PA+ +L  VKMEL D+A
Sbjct:     9 KDPIRVLITGAAGNIGYAIAPMIARGIMLGPDQPMILHLLDIEPASSSLEAVKMELQDSA 68

Query:    63 FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
             FPLLKGV+ATT+ VEAC  VNI +M+GGFPR  GMERKDVMSKNV IYKAQASALE++A+
Sbjct:    69 FPLLKGVIATTNVVEACKDVNIVIMIGGFPRIAGMERKDVMSKNVVIYKAQASALERYAS 128

Query:   123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182
              +CKVLVVANPANTNALILKEFAPSIP +NITCLTRLDHNRAL Q+++KL+V VS VKNV
Sbjct:   129 DDCKVLVVANPANTNALILKEFAPSIPEENITCLTRLDHNRALAQLADKLSVPVSSVKNV 188

Query:   183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXX 242
             I+WGNHSS+QYPD NHATV+T  G++P++ELV D  WL  EFI  VQQRGAA+++ARK  
Sbjct:   189 IVWGNHSSTQYPDTNHATVSTKTGDRPLKELVTDHNWLKNEFIVEVQQRGAAVLRARKQS 248

Query:   243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQG 302
                      CDHIRDW LGTP+GTWVSMGV SDGSY +P GL+YSFPV C  G W IVQG
Sbjct:   249 SAFSAAGAACDHIRDWFLGTPKGTWVSMGVCSDGSYGIPPGLVYSFPVICEKGSWKIVQG 308

Query:   303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
             LSIDEFSR+K+D +A EL+EEK LAYSCL+
Sbjct:   309 LSIDEFSREKMDDSARELAEEKDLAYSCLN 338

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016020 "membrane" evidence=IDA

UNIPROTKB|P11708 MDH1 "Malate dehydrogenase, cytoplasmic" [Sus scrofa (taxid:9823)]

 Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
 Identities = 194/330 (58%), Positives = 239/330 (72%)

Query:     4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
             EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct:     3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 62

Query:    64 PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
             PLLK V+AT     A   +++A++VG  PR++GMERKD++  NV I+K Q +AL+++A  
Sbjct:    63 PLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKK 122

Query:   124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
             + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V   DVKNVI
Sbjct:   123 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVI 182

Query:   184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXX 243
             IWGNHSS+QYPDVNHA V   A E  V E VKDD+WL GEFITTVQQRGAA+IKARK   
Sbjct:   183 IWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARKLSS 242

Query:   244 XXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
                     CDH+RD   GTPEG +VSMG+ SDG SY VP  L+YSFPVT ++  W IV+G
Sbjct:   243 AMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEG 302

Query:   303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
             L I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct:   303 LPINDFSREKMDLTAKELAEEKETAFEFLS 332

GO:0005829 "cytosol" evidence=IDA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P40925 MDH1 "Malate dehydrogenase, cytoplasmic" [Homo sapiens (taxid:9606)]

 Score = 978 (349.3 bits), Expect = 1.7e-98, P = 1.7e-98
 Identities = 192/330 (58%), Positives = 238/330 (72%)

Query:     4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
             EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct:     3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 62

Query:    64 PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
             PLLK V+AT     A   +++A++VG  PR+EGMERKD++  NV I+K+Q +AL+++A  
Sbjct:    63 PLLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKK 122

Query:   124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
             + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V  +DVKNVI
Sbjct:   123 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVI 182

Query:   184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXX 243
             IWGNHSS+QYPDVNHA V     E  V E +KDD+WL GEF+TTVQQRGAA+IKARK   
Sbjct:   183 IWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLSS 242

Query:   244 XXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
                     CDH+RD   GTPEG +VSMGV SDG SY VP  L+YSFPV  +N  W  V+G
Sbjct:   243 AMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEG 302

Query:   303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
             L I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct:   303 LPINDFSREKMDLTAKELTEEKESAFEFLS 332

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0047860 "diiodophenylpyruvate reductase activity" evidence=IEA

GO:0004470 "malic enzyme activity" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0006006 "glucose metabolic process" evidence=TAS

GO:0006094 "gluconeogenesis" evidence=TAS

GO:0030060 "L-malate dehydrogenase activity" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

UNIPROTKB|Q3T145 MDH1 "Malate dehydrogenase, cytoplasmic" [Bos taurus (taxid:9913)]

 Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
 Identities = 189/330 (57%), Positives = 238/330 (72%)

Query:     4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
             EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct:     3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 62

Query:    64 PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
             PLLK V+AT     A   +++A++VG  PR++GMERKD++  NV I+K Q +AL+++A  
Sbjct:    63 PLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKK 122

Query:   124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
             + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V   DVKNVI
Sbjct:   123 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVI 182

Query:   184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXX 243
             IWGNHSS+QYPDVNHA V     E  V E +KDD+WL GEFITTVQQRGAA+IKARK   
Sbjct:   183 IWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFITTVQQRGAAVIKARKLSS 242

Query:   244 XXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
                     CDH+RD   GTPEG +VSMG+ SDG SY +P  L+YSFPVT ++  W +V+G
Sbjct:   243 AMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGIPDDLLYSFPVTIKDKTWKVVEG 302

Query:   303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
             L I++FSR+K+DLTA+EL+EEK  A+  L+
Sbjct:   303 LPINDFSREKMDLTAKELAEEKETAFEFLA 332

GO:0005813 "centrosome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2QV08 MDH1 "Malate dehydrogenase" [Canis lupus familiaris (taxid:9615)]

 Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
 Identities = 190/330 (57%), Positives = 239/330 (72%)

Query:     4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
             EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct:    17 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 76

Query:    64 PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
             PLLK V+AT     A   +++A++VG  PR++GMERKD++  NV I+K Q +ALE++A  
Sbjct:    77 PLLKDVIATDKEDVAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALEKYAKK 136

Query:   124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
             + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V   DVKNVI
Sbjct:   137 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVI 196

Query:   184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXX 243
             IWGNHSS+QYPDV+HA V     E  V + +KD++WL GEFITTVQQRGAA+IKARK   
Sbjct:   197 IWGNHSSTQYPDVSHAKVKLQGKEVGVYDALKDESWLKGEFITTVQQRGAAVIKARKLSS 256

Query:   244 XXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCRNGEWTIVQG 302
                     CDH+RD   GTPEG +VSMG+ SDG+ Y VP  L+YSFPVT +N  W IV+G
Sbjct:   257 AMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNPYGVPDDLLYSFPVTIKNKTWKIVEG 316

Query:   303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
             L+I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct:   317 LTINDFSREKMDLTAKELAEEKETAFEFLS 346

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:97051 Mdh1 "malate dehydrogenase 1, NAD (soluble)" [Mus musculus (taxid:10090)]

 Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
 Identities = 194/330 (58%), Positives = 236/330 (71%)

Query:     4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
             EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct:     3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 62

Query:    64 PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
             PLL+ V+AT     A   +++AV+VG  PR+EGMERKD++  NV I+K+Q +ALE++A  
Sbjct:    63 PLLQDVIATDKEEIAFKDLDVAVLVGSMPRREGMERKDLLKANVKIFKSQGTALEKYAKK 122

Query:   124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
             + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V   DVKNVI
Sbjct:   123 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDVKNVI 182

Query:   184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXX 243
             IWGNHSS+QYPDVNHA V     E  V E +KDD+WL GEFITTVQQRGAA+IKARK   
Sbjct:   183 IWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFITTVQQRGAAVIKARKLSS 242

Query:   244 XXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
                      DHIRD   GTPEG +VSMGV SDG SY VP  L+YSFPV  +N  W  V+G
Sbjct:   243 AMSAAKAIADHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEG 302

Query:   303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
             L I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct:   303 LPINDFSREKMDLTAKELTEEKETAFEFLS 332

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005829 "cytosol" evidence=ISO

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0006107 "oxaloacetate metabolic process" evidence=ISO

GO:0006108 "malate metabolic process" evidence=ISO

GO:0006734 "NADH metabolic process" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=ISO

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0019674 "NAD metabolic process" evidence=ISO

GO:0030060 "L-malate dehydrogenase activity" evidence=ISO

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

RGD|3072 Mdh1 "malate dehydrogenase 1, NAD (soluble)" [Rattus norvegicus (taxid:10116)]

 Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
 Identities = 194/330 (58%), Positives = 236/330 (71%)

Query:     4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
             EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct:     3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 62

Query:    64 PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
             PLL+ V+AT     A   +++AV+VG  PR+EGMERKD++  NV I+K+Q +ALE++A  
Sbjct:    63 PLLQDVIATDKEEVAFKDLDVAVLVGSMPRREGMERKDLLKANVKIFKSQGAALEKYAKK 122

Query:   124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
             + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V   DVKNVI
Sbjct:   123 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDVKNVI 182

Query:   184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXX 243
             IWGNHSS+QYPDVNHA V     E  V E +KDD+WL GEFITTVQQRGAA+IKARK   
Sbjct:   183 IWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFITTVQQRGAAVIKARKLSS 242

Query:   244 XXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
                      DHIRD   GTPEG +VSMGV SDG SY VP  L+YSFPV  +N  W  V+G
Sbjct:   243 AMSAAKAISDHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEG 302

Query:   303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
             L I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct:   303 LPINDFSREKMDLTAKELTEEKETAFEFLS 332

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005813 "centrosome" evidence=IEA;ISO

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0006107 "oxaloacetate metabolic process" evidence=IDA

GO:0006108 "malate metabolic process" evidence=IDA

GO:0006734 "NADH metabolic process" evidence=IDA

GO:0016615 "malate dehydrogenase activity" evidence=IDA

GO:0019674 "NAD metabolic process" evidence=IDA

GO:0030060 "L-malate dehydrogenase activity" evidence=IDA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0051287 "NAD binding" evidence=IDA

UNIPROTKB|Q5ZME2 MDH1 "Malate dehydrogenase, cytoplasmic" [Gallus gallus (taxid:9031)]

 Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
 Identities = 189/330 (57%), Positives = 236/330 (71%)

Query:     4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
             EP+RVLVTGAAGQI Y+L+  IA+G + G +QP++L +LDI P    L GV MEL D A 
Sbjct:     3 EPIRVLVTGAAGQIAYSLLYSIAKGDVFGKEQPLVLVLLDITPMMTVLEGVVMELQDCAL 62

Query:    64 PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
             PLL+ V+ T     A   ++IA++VG  PR+EGMERKD++  NV I+K+Q +AL+++A  
Sbjct:    63 PLLREVIPTDKEEVAFKDLDIAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKK 122

Query:   124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
               KV+VV NPANTN LI  + APSIP +N +CLTRLDHNRA  QI+ KL V  +DVKNVI
Sbjct:   123 TVKVVVVGNPANTNCLIASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTSNDVKNVI 182

Query:   184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXX 243
             IWGNHSS+QYPDVNHA VN    E  V E +KDD+WL G+FI TVQQRGAA+IKARK   
Sbjct:   183 IWGNHSSTQYPDVNHAKVNVKGKEVGVYEAIKDDSWLKGDFILTVQQRGAAVIKARKLSS 242

Query:   244 XXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
                     CDH+RD   GTP G +VSMGV SDG SY VP  L+YSFPV  ++  W  V+G
Sbjct:   243 AMSAAKAICDHVRDIWFGTPAGEFVSMGVISDGNSYGVPEDLLYSFPVVIKDKTWKFVEG 302

Query:   303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
             L I++FSR+K+DLTA+EL+EEK  A   LS
Sbjct:   303 LPINDFSREKMDLTAKELTEEKETAVEFLS 332

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0006094 "gluconeogenesis" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A9IIS3	MDH_BORPD	1, ., 1, ., 1, ., 3, 7	0.5552	0.9608	0.9696	yes	no
O48905	MDHC_MEDSA	1, ., 1, ., 1, ., 3, 7	0.9216	1.0	1.0	N/A	no
Q0VQ52	MDH_ALCBS	1, ., 1, ., 1, ., 3, 7	0.5714	0.9548	0.9664	yes	no
Q9RXI8	MDH_DEIRA	1, ., 1, ., 1, ., 3, 7	0.5776	0.9548	0.9606	yes	no
A4FFX3	MDH_SACEN	1, ., 1, ., 1, ., 3, 7	0.5586	0.9608	0.9725	yes	no
O88989	MDHC_RAT	1, ., 1, ., 1, ., 3, 7	0.6090	0.9909	0.9850	yes	no
B1W3N4	MDH_STRGG	1, ., 1, ., 1, ., 3, 7	0.5432	0.9638	0.9726	yes	no
O24047	MDHC_MESCR	1, ., 1, ., 1, ., 3, 7	0.9096	1.0	1.0	N/A	no
Q7NZ60	MDH_CHRVO	1, ., 1, ., 1, ., 3, 7	0.5572	0.9578	0.9754	yes	no
Q0ABE6	MDH_ALHEH	1, ., 1, ., 1, ., 3, 7	0.5745	0.9548	0.9723	yes	no
Q0AFK6	MDH_NITEC	1, ., 1, ., 1, ., 3, 7	0.5329	0.9487	0.9633	yes	no
Q21K60	MDH_SACD2	1, ., 1, ., 1, ., 3, 7	0.5683	0.9759	0.9908	yes	no
Q54VM2	MDHC_DICDI	1, ., 1, ., 1, ., 3, 7	0.5692	1.0	0.9969	yes	no
Q5ZME2	MDHC_CHICK	1, ., 1, ., 1, ., 3, 7	0.5939	0.9909	0.9850	yes	no
A1R2B5	MDH_ARTAT	1, ., 1, ., 1, ., 3, 7	0.5389	0.9548	0.9664	yes	no
Q6DIY9	MDHC_XENTR	1, ., 1, ., 1, ., 3, 7	0.6030	0.9909	0.9850	yes	no
A1K5Q9	MDH_AZOSB	1, ., 1, ., 1, ., 3, 7	0.5535	0.9608	0.9666	yes	no
A1WV94	MDH_HALHL	1, ., 1, ., 1, ., 3, 7	0.5652	0.9548	0.9723	yes	no
Q1Q932	MDH_PSYCK	1, ., 1, ., 1, ., 3, 7	0.5727	0.9548	0.9635	yes	no
Q82WB9	MDH_NITEU	1, ., 1, ., 1, ., 3, 7	0.5109	0.9487	0.9633	yes	no
Q08062	MDHC_MAIZE	1, ., 1, ., 1, ., 3, 7	0.9184	0.9969	0.9969	N/A	no
B3PHI3	MDH_CELJU	1, ., 1, ., 1, ., 3, 7	0.5714	0.9548	0.9694	yes	no
P93819	MDHC1_ARATH	1, ., 1, ., 1, ., 3, 7	0.9126	1.0	1.0	yes	no
P14152	MDHC_MOUSE	1, ., 1, ., 1, ., 3, 7	0.6090	0.9909	0.9850	yes	no
B2UKY5	MDH_AKKM8	1, ., 1, ., 1, ., 3, 7	0.5454	0.9789	0.9878	yes	no
Q47TT4	MDH_THEFY	1, ., 1, ., 1, ., 3, 7	0.5740	0.9638	0.9696	yes	no
Q6PAB3	MDHC_XENLA	1, ., 1, ., 1, ., 3, 7	0.5909	0.9909	0.9850	N/A	no
A5WGM2	MDH_PSYWF	1, ., 1, ., 1, ., 3, 7	0.5603	0.9548	0.9694	yes	no
B1XV63	MDH_POLNS	1, ., 1, ., 1, ., 3, 7	0.5449	0.9849	0.9939	yes	no
Q7XDC8	MDHC_ORYSJ	1, ., 1, ., 1, ., 3, 7	0.9036	1.0	1.0	yes	no
C5BU70	MDH_TERTT	1, ., 1, ., 1, ., 3, 7	0.5714	0.9548	0.9694	yes	no
P57106	MDHC2_ARATH	1, ., 1, ., 1, ., 3, 7	0.9216	1.0	1.0	no	no
Q7YRU4	MDHC_FELCA	1, ., 1, ., 1, ., 3, 7	0.5969	0.9909	0.9850	N/A	no
P10584	MDH_THETH	1, ., 1, ., 1, ., 3, 7	0.5420	0.9518	0.9663	yes	no
P11708	MDHC_PIG	1, ., 1, ., 1, ., 3, 7	0.6090	0.9909	0.9850	yes	no
C1CY73	MDH_DEIDV	1, ., 1, ., 1, ., 3, 7	0.5807	0.9548	0.9606	yes	no
Q3T145	MDHC_BOVIN	1, ., 1, ., 1, ., 3, 7	0.5939	0.9909	0.9850	yes	no
P40925	MDHC_HUMAN	1, ., 1, ., 1, ., 3, 7	0.6030	0.9909	0.9850	yes	no
Q7W5Q8	MDH_BORPA	1, ., 1, ., 1, ., 3, 7	0.5552	0.9608	0.9696	yes	no
Q2L068	MDH_BORA1	1, ., 1, ., 1, ., 3, 7	0.5460	0.9608	0.9696	yes	no
Q7WD94	MDH_BORBR	1, ., 1, ., 1, ., 3, 7	0.5552	0.9608	0.9696	yes	no
Q7VW97	MDH_BORPE	1, ., 1, ., 1, ., 3, 7	0.5552	0.9608	0.9696	yes	no
Q9SML8	MDHC_BETVU	1, ., 1, ., 1, ., 3, 7	0.8975	1.0	1.0	N/A	no
Q04820	MDHC_ECHGR	1, ., 1, ., 1, ., 3, 7	0.5243	0.9849	0.9849	N/A	no
A4SWW0	MDH_POLSQ	1, ., 1, ., 1, ., 3, 7	0.5535	0.9638	0.9726	yes	no
Q82HS2	MDH_STRAW	1, ., 1, ., 1, ., 3, 7	0.5462	0.9638	0.9726	yes	no
Q4FQU7	MDH_PSYA2	1, ., 1, ., 1, ., 3, 7	0.5665	0.9548	0.9635	yes	no
Q1IWC9	MDH_DEIGD	1, ., 1, ., 1, ., 3, 7	0.5822	0.9367	0.9311	yes	no
Q9K3J3	MDH_STRCO	1, ., 1, ., 1, ., 3, 7	0.5617	0.9638	0.9726	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.998
3rd Layer	1.1.1.37	0.993

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_2730019	malate dehydrogenase (EC-1.1.1.37) (332 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_Genewise1_v1.C_LG_XVI2794	citrate synthase (EC-2.3.3.1) (509 aa)						•	•		0.975
	estExt_Genewise1_v1.C_LG_XIV2957	citrate synthase (EC-2.3.3.1) (512 aa)						•	•		0.975
	estExt_fgenesh4_pm.C_1480010	citrate synthase (EC-2.3.3.1) (478 aa)	•					•	•		0.969
	fgenesh4_pg.C_LG_XV000664	malate synthase (EC-2.3.3.9) (554 aa)						•	•		0.944
	eugene3.00021795	aspartate ammonia-lyase (EC-4.2.1.2) (490 aa)						•	•		0.923
	estExt_Genewise1_v1.C_LG_VII3984	phosphoenolpyruvate carboxykinase (ATP) (EC-4.1.1.49) (664 aa)						•	•		0.913
	estExt_fgenesh4_pg.C_LG_II0983	phosphoenolpyruvate carboxykinase (ATP) (EC-4.1.1.49) (667 aa)						•	•		0.913
	eugene3.00061692	hypothetical protein (570 aa)						•	•		0.905
	estExt_fgenesh4_pg.C_LG_XVIII0238	hypothetical protein (570 aa)						•	•		0.905
	estExt_Genewise1_v1.C_LG_XVIII2568	RecName- Full=NADP-dependent malic enzyme; Short=NADP-ME; EC=1.1.1.40; (591 aa)						•	•		0.905

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	332
PLN00135	309	PLN00135, PLN00135, malate dehydrogenase	0.0
cd01336	325	cd01336, MDH_cytoplasmic_cytosolic, Cytoplasmic an	0.0
TIGR01758	324	TIGR01758, MDH_euk_cyt, malate dehydrogenase, NAD-	0.0
TIGR01759	323	TIGR01759, MalateDH-SF1, malate dehydrogenase	0.0
PRK05442	326	PRK05442, PRK05442, malate dehydrogenase; Provisio	0.0
cd01338	322	cd01338, MDH_choloroplast_like, Chloroplast-like m	1e-177
cd00704	323	cd00704, MDH, Malate dehydrogenase	1e-175
PLN00112	444	PLN00112, PLN00112, malate dehydrogenase (NADP); P	1e-101
TIGR01757	387	TIGR01757, Malate-DH_plant, malate dehydrogenase,	1e-93
TIGR01756	313	TIGR01756, LDH_protist, lactate dehydrogenase	2e-89
cd05295	452	cd05295, MDH_like, Malate dehydrogenase-like	4e-87
COG0039	313	COG0039, Mdh, Malate/lactate dehydrogenases [Energ	8e-74
cd00650	263	cd00650, LDH_MDH_like, NAD-dependent, lactate dehy	9e-58
pfam02866	173	pfam02866, Ldh_1_C, lactate/malate dehydrogenase,	2e-50
pfam00056	142	pfam00056, Ldh_1_N, lactate/malate dehydrogenase,	4e-37
cd01339	300	cd01339, LDH-like_MDH, L-lactate dehydrogenase-lik	3e-17
PTZ00117	319	PTZ00117, PTZ00117, malate dehydrogenase; Provisio	1e-15
PRK06223	307	PRK06223, PRK06223, malate dehydrogenase; Reviewed	8e-15
cd05294	309	cd05294, LDH-like_MDH_nadp, A lactate dehydrogenas	1e-14
cd00300	300	cd00300, LDH_like, L-lactate dehydrogenase-like en	2e-14
TIGR01772	312	TIGR01772, MDH_euk_gproteo, malate dehydrogenase,	6e-12
cd01337	310	cd01337, MDH_glyoxysomal_mitochondrial, Glyoxysoma	2e-11
TIGR01763	305	TIGR01763, MalateDH_bact, malate dehydrogenase, NA	1e-10
cd05293	312	cd05293, LDH_1, A subgroup of L-lactate dehydrogen	2e-09
PRK05086	312	PRK05086, PRK05086, malate dehydrogenase; Provisio	5e-09
PTZ00082	321	PTZ00082, PTZ00082, L-lactate dehydrogenase; Provi	7e-09
PLN00106	323	PLN00106, PLN00106, malate dehydrogenase	2e-08
PRK00066	315	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	3e-07
TIGR01771	299	TIGR01771, L-LDH-NAD, L-lactate dehydrogenase	4e-07
PTZ00325	321	PTZ00325, PTZ00325, malate dehydrogenase; Provisio	4e-06
PLN02602	350	PLN02602, PLN02602, lactate dehydrogenase	5e-06
cd05291	306	cd05291, HicDH_like, L-2-hydroxyisocapronate dehyd	6e-05
cd05292	308	cd05292, LDH_2, A subgroup of L-lactate dehydrogen	3e-04

>gnl|CDD|177744 PLN00135, PLN00135, malate dehydrogenase

 Score =  667 bits (1723), Expect = 0.0
 Identities = 283/309 (91%), Positives = 293/309 (94%)

Query: 24  MIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83
           MIARGVMLG DQPVILHMLDIPPAAEALNGVKMEL+DAAFPLLKGVVATTD VEAC GVN
Sbjct: 1   MIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKGVN 60

Query: 84  IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE 143
           IAVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+HAAP+CKVLVVANPANTNALILKE
Sbjct: 61  IAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPDCKVLVVANPANTNALILKE 120

Query: 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNT 203
           FAPSIP KNITCLTRLDHNRALGQISE+L V VSDVKNVIIWGNHSS+QYPDVNHATV T
Sbjct: 121 FAPSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHSSTQYPDVNHATVKT 180

Query: 204 AAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTP 263
            +GEKPVRELV DDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTP
Sbjct: 181 PSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTP 240

Query: 264 EGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 323
           EGTWVSMGVYSDGSY VP GLIYSFPVTC  GEW+IVQGLSIDEFSRKK+D TA+EL EE
Sbjct: 241 EGTWVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQGLSIDEFSRKKMDATAKELKEE 300

Query: 324 KALAYSCLS 332
           K LAYSCLS
Sbjct: 301 KELAYSCLS 309

Length = 309

>gnl|CDD|133421 cd01336, MDH_cytoplasmic_cytosolic, Cytoplasmic and cytosolic Malate dehydrogenases

 Score =  645 bits (1666), Expect = 0.0
 Identities = 231/325 (71%), Positives = 267/325 (82%)

Query: 4   EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
           EP+RVLVTGAAGQI Y+L+PMIA+G + G DQPVILH+LDIPPA +AL GV MEL D AF
Sbjct: 1   EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAF 60

Query: 64  PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
           PLLK VVATTD  EA   V++A++VG  PRKEGMERKD++  NV I+K Q  AL+++A  
Sbjct: 61  PLLKSVVATTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKK 120

Query: 124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
           N KVLVV NPANTNALIL ++APSIP +N T LTRLDHNRA  QI+ KL V VSDVKNVI
Sbjct: 121 NVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHNRAKSQIALKLGVPVSDVKNVI 180

Query: 184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS 243
           IWGNHSS+QYPDVNHATV      KP RE VKDDAWLNGEFI+TVQ+RGAA+IKARKLSS
Sbjct: 181 IWGNHSSTQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAAVIKARKLSS 240

Query: 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGL 303
           A+SAA + CDH+ DW  GTPEG +VSMGVYSDGSY VP GLI+SFPVTC+NG+W IVQGL
Sbjct: 241 AMSAAKAICDHVHDWWFGTPEGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQGL 300

Query: 304 SIDEFSRKKLDLTAEELSEEKALAY 328
           SID+FSR+K+D TA+EL EEK  A 
Sbjct: 301 SIDDFSREKIDATAKELVEEKETAL 325

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 325

>gnl|CDD|130819 TIGR01758, MDH_euk_cyt, malate dehydrogenase, NAD-dependent

 Score =  573 bits (1479), Expect = 0.0
 Identities = 231/324 (71%), Positives = 270/324 (83%), Gaps = 1/324 (0%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           RV+VTGAAGQIGYAL+PMIARG MLG DQP+ILH+LDIPPA + L GV MEL+D AFPLL
Sbjct: 1   RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLL 60

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
            GVV T D   A T V++A++VG FPRKEGMER+D++SKNV I+K Q  AL++ A  +CK
Sbjct: 61  DGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCK 120

Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186
           VLVV NPANTNAL+L  +APSIP KN + LTRLDHNRAL Q++E+  V VSDVKNVIIWG
Sbjct: 121 VLVVGNPANTNALVLSNYAPSIPPKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWG 180

Query: 187 NHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALS 246
           NHSS+QYPDVNHATV     +KPVRE +KDDA+L+GEFITTVQQRGAAII+ARKLSSALS
Sbjct: 181 NHSSTQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRARKLSSALS 240

Query: 247 AASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCRNGEWTIVQGLSI 305
           AA +A D + DWVLGTPEGT+VSMGVYSDGS Y VP GLI+SFPVTC+NGEW IV+GL +
Sbjct: 241 AAKAAVDQMHDWVLGTPEGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEGLCV 300

Query: 306 DEFSRKKLDLTAEELSEEKALAYS 329
           D+ SRKKL LTA+EL EE+  A S
Sbjct: 301 DDSSRKKLALTAKELEEERDEALS 324

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography. Length = 324

>gnl|CDD|130820 TIGR01759, MalateDH-SF1, malate dehydrogenase

 Score =  545 bits (1406), Expect = 0.0
 Identities = 209/327 (63%), Positives = 248/327 (75%), Gaps = 6/327 (1%)

Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           K+PVRV VTGAAGQIGY+L+  IA G + G DQPV+LH+LDIPPA +AL GV MEL D A
Sbjct: 1   KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCA 60

Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           FPLL GVVATTD  EA   V+ A++VG FPRK GMER D++SKN  I+K Q  AL + A 
Sbjct: 61  FPLLAGVVATTDPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAK 120

Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182
            + KVLVV NPANTNALI  + AP IP KN + +TRLDHNRA  Q++ K  V VSDVKNV
Sbjct: 121 KDVKVLVVGNPANTNALIASKNAPDIPPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNV 180

Query: 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242
           IIWGNHS++Q PD  HATV      +PV+E++KDD WL GEFI TVQQRGAA+I+AR  S
Sbjct: 181 IIWGNHSNTQVPDFTHATV----DGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEARGAS 236

Query: 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTC-RNGEWTIV 300
           SA SAA++A DH+RDWV GTPEG WVSMGVYSDG  Y +P G+I+SFPVTC  +GEW IV
Sbjct: 237 SAASAANAAIDHVRDWVTGTPEGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIV 296

Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALA 327
           +GL +D+F R KLD T +EL EEK  A
Sbjct: 297 EGLPLDDFVRGKLDATEDELLEEKEEA 323

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. Length = 323

>gnl|CDD|235468 PRK05442, PRK05442, malate dehydrogenase; Provisional

 Score =  524 bits (1353), Expect = 0.0
 Identities = 197/324 (60%), Positives = 240/324 (74%), Gaps = 4/324 (1%)

Query: 2   AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA 61
            K PVRV VTGAAGQIGY+L+  IA G MLG DQPVIL +L+IPPA +AL GV MEL D 
Sbjct: 1   MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDC 60

Query: 62  AFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA 121
           AFPLL GVV T D   A    ++A++VG  PR  GMERKD++  N +I+ AQ  AL + A
Sbjct: 61  AFPLLAGVVITDDPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVA 120

Query: 122 APNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181
           A + KVLVV NPANTNALI  + AP +PA+N T +TRLDHNRAL Q++ K  V V+D+K 
Sbjct: 121 ARDVKVLVVGNPANTNALIAMKNAPDLPAENFTAMTRLDHNRALSQLAAKAGVPVADIKK 180

Query: 182 VIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKL 241
           + +WGNHS++QYPD  HAT++     KP  E++ D AWL   FI TVQ+RGAAII+AR  
Sbjct: 181 MTVWGNHSATQYPDFRHATIDG----KPAAEVINDQAWLEDTFIPTVQKRGAAIIEARGA 236

Query: 242 SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQ 301
           SSA SAA++A DH+RDWVLGTPEG WVSMGV SDGSY +P GLI+ FPVTC NGE+ IVQ
Sbjct: 237 SSAASAANAAIDHVRDWVLGTPEGDWVSMGVPSDGSYGIPEGLIFGFPVTCENGEYEIVQ 296

Query: 302 GLSIDEFSRKKLDLTAEELSEEKA 325
           GL ID+FSR+K+D T  EL EE+ 
Sbjct: 297 GLEIDDFSREKIDATLAELEEERD 320

Length = 326

>gnl|CDD|133423 cd01338, MDH_choloroplast_like, Chloroplast-like malate dehydrogenases

 Score =  494 bits (1274), Expect = e-177
 Identities = 185/322 (57%), Positives = 228/322 (70%), Gaps = 4/322 (1%)

Query: 4   EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
           +PVRV VTGAAGQIGY+L+  IA G M G DQPVIL +L++P A +AL GV MEL D AF
Sbjct: 1   KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAF 60

Query: 64  PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
           PLL  +V T D   A    + A++VG  PR  GMER D++  N  I+ AQ  AL   A+ 
Sbjct: 61  PLLAEIVITDDPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASR 120

Query: 124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
           + KVLVV NP NTNALI  + AP IP  N T +TRLDHNRA  Q+++K  V V+DVKN++
Sbjct: 121 DVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMV 180

Query: 184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS 243
           IWGNHS +QYPD  +AT+    G KP  E++ D AWL  EFI TVQ+RGAAIIKAR  SS
Sbjct: 181 IWGNHSPTQYPDFTNATI----GGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKARGASS 236

Query: 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGL 303
           A SAA++A DH+RDWVLGTPEG W SM V SDGSY +P GLI+SFPV  + G + IV+GL
Sbjct: 237 AASAANAAIDHMRDWVLGTPEGDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEGL 296

Query: 304 SIDEFSRKKLDLTAEELSEEKA 325
            ID+F+R+K+D T  EL EE+ 
Sbjct: 297 EIDDFAREKIDATLAELLEERE 318

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 322

>gnl|CDD|133420 cd00704, MDH, Malate dehydrogenase

 Score =  489 bits (1261), Expect = e-175
 Identities = 189/323 (58%), Positives = 237/323 (73%), Gaps = 2/323 (0%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
           + VL+TGAAGQIGY L+ +IA G + G DQPVILH+LDIPPA +AL GV MEL D AFPL
Sbjct: 1   LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPL 60

Query: 66  LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC 125
           LKGVV TTD  EA   V++A++VG FPRK GMER D++ KN  I+K Q  AL + A P  
Sbjct: 61  LKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTV 120

Query: 126 KVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIW 185
           KVLVV NPANTNALI  + AP++P KN T LTRLDHNRA  Q++ KL V+VSDVKNVIIW
Sbjct: 121 KVLVVGNPANTNALIALKNAPNLPPKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIW 180

Query: 186 GNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSAL 245
           GNHS++Q PD+++A V    G + V   + D+ WLN EF+ TVQ+RGAAIIK R  SSA 
Sbjct: 181 GNHSNTQVPDLSNAVVYGPGGTEWV-LDLLDEEWLNDEFVKTVQKRGAAIIKKRGASSAA 239

Query: 246 SAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLS 304
           SAA +  DH++DW+ GTP G  VSMGVYS G  Y +P G+++SFP TC+ G W +V+ L 
Sbjct: 240 SAAKAIADHVKDWLFGTPPGEIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVEDLK 299

Query: 305 IDEFSRKKLDLTAEELSEEKALA 327
           ++++ R+KL  T EEL EEK +A
Sbjct: 300 LNDWLREKLKATEEELIEEKEIA 322

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 323

>gnl|CDD|215060 PLN00112, PLN00112, malate dehydrogenase (NADP); Provisional

 Score =  303 bits (778), Expect = e-101
 Identities = 141/326 (43%), Positives = 192/326 (58%), Gaps = 10/326 (3%)

Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           K+ + V V+GAAG I   L+  +A G + G DQP+ L +L    + +AL GV MEL D+ 
Sbjct: 98  KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSL 157

Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           +PLL+ V    D  E       A+++G  PR  GMER D++  N  I+  Q  AL + A+
Sbjct: 158 YPLLREVSIGIDPYEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVAS 217

Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182
            N KV+VV NP NTNALI  + AP+IPAKN   LTRLD NRA  Q++ K  V    V NV
Sbjct: 218 RNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNV 277

Query: 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242
            IWGNHS++Q PD     +N      PV+E++ D  WL  EF   VQ+RG  +IK    S
Sbjct: 278 TIWGNHSTTQVPDF----LNAKINGLPVKEVITDHKWLEEEFTPKVQKRGGVLIKKWGRS 333

Query: 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCR---NGEWT 298
           SA S A S  D I+  V  TPEG W S GVY+DG+ Y +  GL++S P  CR   +G++ 
Sbjct: 334 SAASTAVSIADAIKSLVTPTPEGDWFSTGVYTDGNPYGIAEGLVFSMP--CRSKGDGDYE 391

Query: 299 IVQGLSIDEFSRKKLDLTAEELSEEK 324
           IV+ + ID++ R+++  +  EL  EK
Sbjct: 392 IVKDVEIDDYLRERIKKSEAELLAEK 417

Length = 444

>gnl|CDD|130818 TIGR01757, Malate-DH_plant, malate dehydrogenase, NADP-dependent

 Score =  283 bits (725), Expect = 1e-93
 Identities = 147/326 (45%), Positives = 199/326 (61%), Gaps = 10/326 (3%)

Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           K+ V V V+GAAG I   L+ M+A G + G DQP+ L +L    + EAL GV MEL D+ 
Sbjct: 42  KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSL 101

Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           +PLL+ V    D  E     + A+++G  PR  GMER D++  N  I+  Q  AL   A+
Sbjct: 102 YPLLREVSIGIDPYEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVAS 161

Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182
            NCKVLVV NP NTNALI  + AP+IP KN   LTRLD NRA  Q++ K     + V NV
Sbjct: 162 KNCKVLVVGNPCNTNALIAMKNAPNIPRKNFHALTRLDENRAKCQLALKSGKFYTSVSNV 221

Query: 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242
            IWGNHS++Q PD     VN   G +P +E++KD  WL  EF  TVQ+RG A+IK    S
Sbjct: 222 TIWGNHSTTQVPDF----VNAKIGGRPAKEVIKDTKWLEEEFTPTVQKRGGALIKKWGRS 277

Query: 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCR---NGEWT 298
           SA S A S  D I+  V+ TPEG W S GVY+DG+ Y +  GL++S P  CR   +G++ 
Sbjct: 278 SAASTAVSIADAIKSLVVPTPEGDWFSTGVYTDGNPYGIAEGLVFSMP--CRSKGDGDYE 335

Query: 299 IVQGLSIDEFSRKKLDLTAEELSEEK 324
           +   +S+D+F R+++  + +EL +EK
Sbjct: 336 LATDVSMDDFLRERIRKSEDELLKEK 361

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. Length = 387

>gnl|CDD|130817 TIGR01756, LDH_protist, lactate dehydrogenase

 Score =  270 bits (691), Expect = 2e-89
 Identities = 114/311 (36%), Positives = 174/311 (55%), Gaps = 5/311 (1%)

Query: 25  IARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84
           IA G + G ++PV LH+L+IPPA   L  + MEL D AFP L G + TT   EA   ++ 
Sbjct: 5   IANGDLYG-NRPVCLHLLEIPPALNRLEALAMELEDCAFPNLAGTIVTTKLEEAFKDIDC 63

Query: 85  AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144
           A +V   P K G  R D+++KN  I+KA   AL ++A P  KVLV+ NP NTN L+    
Sbjct: 64  AFLVASVPLKPGEVRADLLTKNTPIFKATGEALSEYAKPTVKVLVIGNPVNTNCLVAMLH 123

Query: 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTA 204
           AP + A+N + L  LDHNRA+ +I+ KL V V  + +V++WGNH+ S   D+ HA     
Sbjct: 124 APKLSAENFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVWGNHAESMVADLTHAEFTKN 183

Query: 205 AGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPE 264
              + V + +  D +   +F   + QR   I++ R  +SA S   ++  H++ W+ GT  
Sbjct: 184 GKHQKVFDELCRD-YPEPDFFEVIAQRAWKILEMRGFTSAASPVKASLQHMKAWLFGTRP 242

Query: 265 GTWVSMG--VYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELS 321
           G  +SMG  V     Y +  G+I+SFP T   +G+  +V+   ++ + + KL  T ++L 
Sbjct: 243 GEVLSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENFELNPWLKTKLAQTEKDLF 302

Query: 322 EEKALAYSCLS 332
           EE+  A   L+
Sbjct: 303 EERETALKALA 313

This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule. Length = 313

>gnl|CDD|133431 cd05295, MDH_like, Malate dehydrogenase-like

 Score =  268 bits (688), Expect = 4e-87
 Identities = 114/332 (34%), Positives = 182/332 (54%), Gaps = 13/332 (3%)

Query: 5   PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP 64
           P++V +T A+  + Y L+P +A G + G ++ + +H+LD P   E L G+ ME+ D AFP
Sbjct: 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFP 182

Query: 65  LLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN 124
           LL+G+  TTD   A    ++ V++  F  KEG + +  +   V+I +     +E++A  +
Sbjct: 183 LLRGISVTTDLDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKED 242

Query: 125 CKVLVVA-NPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
            KV+V      N    IL ++APSIP KNI  + RL  NRA   ++ KLNV  + +K+VI
Sbjct: 243 VKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVI 302

Query: 184 IWGNHSSSQYPDVNHATVNTAAG--------EKPVRELVKDDAWLNGEFITTVQQRGAAI 235
           +WGN   + Y D++ A V              +PV ELV D  W+NGEF+ T++   +  
Sbjct: 303 VWGNIGGNTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEFVATLKSLSS-- 360

Query: 236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNG 295
             +    +A+S A +    +  W  G+P G   S+GV S+G Y +P G+++S PV  +NG
Sbjct: 361 --SLNHEAAISPAHAIATTLSYWYHGSPPGEIFSLGVISEGWYGIPEGIVFSMPVKFQNG 418

Query: 296 EWTIVQGLSIDEFSRKKLDLTAEELSEEKALA 327
            W +V  L + E  R+ L     +L +EK +A
Sbjct: 419 SWEVVTDLELSEILREVLKRITSDLIQEKLVA 450

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 452

>gnl|CDD|223117 COG0039, Mdh, Malate/lactate dehydrogenases [Energy production and conversion]

 Score =  230 bits (588), Expect = 8e-74
 Identities = 105/325 (32%), Positives = 156/325 (48%), Gaps = 21/325 (6%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
           ++V V GA G +G +L  ++     LG++    L ++DI    E   GV ++L  AA PL
Sbjct: 1   MKVAVIGA-GNVGSSLAFLLLLQ-GLGSE----LVLIDINE--EKAEGVALDLSHAAAPL 52

Query: 66  LKGVVATTDA-VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN 124
              V  T D   E   G +I V+  G PRK GM R D++ KN  I K  A A+ ++A P+
Sbjct: 53  GSDVKITGDGDYEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA-PD 111

Query: 125 CKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVII 184
             VLVV NP +    I  +F+     + I   T LD  R    ++EKL V   DV   +I
Sbjct: 112 AIVLVVTNPVDILTYIAMKFSGFPKNRVIGSGTVLDSARFRTFLAEKLGVSPKDVHAYVI 171

Query: 185 WGNHSSSQYPDVNHATVNTAAGEKPVRELVK-DDAWLNGEFITTVQQRGAAIIKARKLSS 243
            G H  +  P  + ATV    G KP+ EL+K D      E I  V+  GA II+A+   +
Sbjct: 172 -GEHGDTMVPLWSQATV----GGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAKGAGT 226

Query: 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVT-CRNGEWTIVQG 302
               A++    +   +    E   + + VY DG Y     + +  P    +NG   I++ 
Sbjct: 227 YYGPAAALARMVEAILRD--EKRVLPVSVYLDGEYG-VEDVYFGVPAVLGKNGVEEILEL 283

Query: 303 LSIDEFSRKKLDLTAEELSEEKALA 327
           L  D+  ++KLD +AEEL +   L 
Sbjct: 284 LLSDD-EQEKLDKSAEELKKNIELV 307

Length = 313

>gnl|CDD|133419 cd00650, LDH_MDH_like, NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

 Score =  187 bits (476), Expect = 9e-58
 Identities = 83/318 (26%), Positives = 131/318 (41%), Gaps = 57/318 (17%)

Query: 8   VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-L 66
           + V GA G +G AL   +A G        + L + DI    E L GV M+L DA  PL  
Sbjct: 1   IAVIGAGGNVGPALAFGLADG---SVLLAIELVLYDIDE--EKLKGVAMDLQDAVEPLAD 55

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
             V  T D  EA    ++ ++  G  RK GM R D++ +NV I K     +E++ +P+  
Sbjct: 56  IKVSITDDPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY-SPDAW 114

Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186
           ++VV+NP +    ++  ++  +P + +  L  LD  R    ++EKL V   DVK V I G
Sbjct: 115 IIVVSNPVDIITYLVWRYSG-LPKEKVIGLGTLDPIRFRRILAEKLGVDPDDVK-VYILG 172

Query: 187 NHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALS 246
            H  SQ PD +                                                 
Sbjct: 173 EHGGSQVPDWSTVR---------------------------------------------- 186

Query: 247 AASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSID 306
            A+S  D IR  +    EG  + +GV ++G   +P  ++ S P             + + 
Sbjct: 187 IATSIADLIRSLL--NDEGEILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIEVGLT 244

Query: 307 EFSRKKLDLTAEELSEEK 324
           +F  +KL  +A+ L +E 
Sbjct: 245 DFELEKLQKSADTLKKEL 262

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 263

>gnl|CDD|202437 pfam02866, Ldh_1_C, lactate/malate dehydrogenase, alpha/beta C-terminal domain

 Score =  165 bits (419), Expect = 2e-50
 Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 4/172 (2%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           T LD  RA   ++EK  V    V NV + G HS +Q+PD +HA V        V+E +KD
Sbjct: 1   TTLDTARARTFLAEKFGVDPRSV-NVYVIGEHSGTQFPDWSHAKVTIIPLISQVKENLKD 59

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
             W   E I  VQ  G  +I+A+  S+  S A +A    +  + GT  G  +S+GVY DG
Sbjct: 60  TDWELEELIERVQNAGYEVIEAKAGSTTYSMAYAAARIAKAILRGT--GGVLSVGVYLDG 117

Query: 277 SYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALA 327
            Y  P  + +S PV   ++G   +V+ L +++F R+KL+ +A EL +E    
Sbjct: 118 YYGSPDDIYFSVPVVLGKDGVEKVVEILPLNDFEREKLEKSAAELKKEIEKG 169

L-lactate dehydrogenases are metabolic enzymes which catalyze the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyze the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. Length = 173

>gnl|CDD|200963 pfam00056, Ldh_1_N, lactate/malate dehydrogenase, NAD binding domain

 Score =  129 bits (327), Expect = 4e-37
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 8/150 (5%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
           V+V V GA G +G +L   +A    L  +    L ++DI    +   GV M+L   +  L
Sbjct: 1   VKVAVVGAGGGVGSSLAFALA-LQGLADE----LVLVDINK--DKAEGVAMDLSHGSTFL 53

Query: 66  LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC 125
               +   D  EA    ++ V+  G PRK GM R D++++N  I+K    A+ +  AP+ 
Sbjct: 54  SVPGIVGGDDYEALKDADVVVITAGVPRKPGMTRLDLLNRNAGIFKDIVPAIAKS-APDA 112

Query: 126 KVLVVANPANTNALILKEFAPSIPAKNITC 155
            VLVV+NP +    I  + +   P + I  
Sbjct: 113 IVLVVSNPVDILTYIAWKVSGLPPERVIGS 142

L-lactate dehydrogenases are metabolic enzymes which catalyze the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyze the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold. Length = 142

>gnl|CDD|133424 cd01339, LDH-like_MDH, L-lactate dehydrogenase-like malate dehydrogenase proteins

 Score = 80.2 bits (199), Expect = 3e-17
 Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 33/196 (16%)

Query: 69  VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL 128
           V  T D  E   G ++ V+  G PRK GM R D++  N  I K  A  ++++ APN  V+
Sbjct: 55  VTGTNDY-EDIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY-APNAIVI 112

Query: 129 VVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNVQV 176
           VV NP +    +  +             +    NR +G             I+E+L V V
Sbjct: 113 VVTNPLDVMTYVAYKA------------SGFPRNRVIGMAGVLDSARFRYFIAEELGVSV 160

Query: 177 SDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAII 236
            DV+ +++ G H  +  P   ++TV    G  P+ EL+  +     E +   +  GA I+
Sbjct: 161 KDVQAMVL-GGHGDTMVPLPRYSTVG---G-IPLTELITKEEI--DEIVERTRNGGAEIV 213

Query: 237 KARKLSSALSAASSAC 252
              K  SA  A ++A 
Sbjct: 214 NLLKTGSAYYAPAAAI 229

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 300

>gnl|CDD|173409 PTZ00117, PTZ00117, malate dehydrogenase; Provisional

 Score = 75.9 bits (187), Expect = 1e-15
 Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 14/213 (6%)

Query: 73  TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132
           T+  E     ++ V+  G  RKE M R+D+++ N  I K+ A +++++  PN  V+ V N
Sbjct: 65  TNNYEDIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY-CPNAFVICVTN 123

Query: 133 PANTNALILKEFAPSIPAKNITCLT-RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSS 191
           P +    + +E +  IP+  I  +   LD +R    ++EKL V   DV  V+I G H   
Sbjct: 124 PLDCMVKVFQEKS-GIPSNKICGMAGVLDSSRFRCNLAEKLGVSPGDVSAVVI-GGHGDL 181

Query: 192 QYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQR---GAAIIKARKLSSALSA- 247
             P   + TVN      P+ + VK  A    E    +++    G  I+K  K  SA  A 
Sbjct: 182 MVPLPRYCTVNGI----PLSDFVKKGAITEKEINEIIKKTRNMGGEIVKLLKKGSAFFAP 237

Query: 248 ASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNV 280
           A++    I  ++    E   +   VY +G YN 
Sbjct: 238 AAAIVAMIEAYL--KDEKRVLVCSVYLNGQYNC 268

Length = 319

>gnl|CDD|180477 PRK06223, PRK06223, malate dehydrogenase; Reviewed

 Score = 73.6 bits (182), Expect = 8e-15
 Identities = 67/253 (26%), Positives = 113/253 (44%), Gaps = 45/253 (17%)

Query: 14  AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVA 71
           AG +G  L  ++A        +   + + DI        G  +++ +AA P+      + 
Sbjct: 10  AGNVGATLAHLLAL------KELGDVVLFDI--VEGVPQGKALDIAEAA-PVEGFDTKIT 60

Query: 72  TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131
            T+  E   G ++ V+  G PRK GM R D++  N  I K  A  ++++ AP+  V+VV 
Sbjct: 61  GTNDYEDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY-APDAIVIVVT 119

Query: 132 NPANT-NALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNVQVSD 178
           NP +    + LKE             +    NR +G             I+E+LNV V D
Sbjct: 120 NPVDAMTYVALKE-------------SGFPKNRVIGMAGVLDSARFRTFIAEELNVSVKD 166

Query: 179 VKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA 238
           V   ++ G H  S  P V ++TV    G  P+ +L+  +  L+ E +   ++ GA I+  
Sbjct: 167 VTAFVL-GGHGDSMVPLVRYSTV----GGIPLEDLLSKEK-LD-EIVERTRKGGAEIVGL 219

Query: 239 RKLSSALSAASSA 251
            K  SA  A +++
Sbjct: 220 LKTGSAYYAPAAS 232

Length = 307

>gnl|CDD|133430 cd05294, LDH-like_MDH_nadp, A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

 Score = 72.8 bits (179), Expect = 1e-14
 Identities = 64/237 (27%), Positives = 113/237 (47%), Gaps = 22/237 (9%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKMELVDAAF 63
           ++V + GA+G++G A   ++A+       + V+  ++++  P + E L G+++++ DA  
Sbjct: 1   MKVSIIGASGRVGSATALLLAK-------EDVVKEINLISRPKSLEKLKGLRLDIYDALA 53

Query: 64  PLLKGVVATTDAVEACT-GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
                      +  +   G +I ++  G PRKEGM R D+  KN  I K  A  + +  A
Sbjct: 54  AAGIDAEIKISSDLSDVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF-A 112

Query: 123 PNCKVLVVANPANT---NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDV 179
           P+ K+LVV NP +     AL    F  +   +     T LD  R    I++  NV +S+V
Sbjct: 113 PDTKILVVTNPVDVMTYKALKESGFDKN---RVFGLGTHLDSLRFKVAIAKHFNVHISEV 169

Query: 180 KNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAII 236
              II G H  S  P ++    +T+ G  P++   +   +   + + TV+  G  II
Sbjct: 170 HTRII-GEHGDSMVPLIS----STSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNII 221

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)- binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 309

>gnl|CDD|133418 cd00300, LDH_like, L-lactate dehydrogenase-like enzymes

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 16/284 (5%)

Query: 41  MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERK 100
           ++D+    E   G  ++L  A+  L  G +            +I V+  G PRK G  R 
Sbjct: 28  LVDVNE--EKAKGDALDLSHASAFLATGTIVRGGDYADAADADIVVITAGAPRKPGETRL 85

Query: 101 DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLD 160
           D++++N  I ++  + L+++  P+  +LVV+NP +    + ++ +     + I   T LD
Sbjct: 86  DLINRNAPILRSVITNLKKY-GPDAIILVVSNPVDILTYVAQKLSGLPKNRVIGSGTLLD 144

Query: 161 HNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL 220
             R    ++EKL+V    V   ++ G H  SQ    + ATV       P+ EL       
Sbjct: 145 SARFRSLLAEKLDVDPQSVHAYVL-GEHGDSQVVAWSTATVGG----LPLEELAPFTKLD 199

Query: 221 NGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNV 280
                  V+  G  II+  K ++    A++  D ++  +L   E   + +    +G Y +
Sbjct: 200 LEAIEEEVRTSGYEIIR-LKGATNYGIATAIADIVKS-ILLD-ERRVLPVSAVQEGQYGI 256

Query: 281 PAGLIYSFP-VTCRNGEWTIVQG-LSIDEFSRKKLDLTAEELSE 322
              +  S P V  R G   I++  L+ DE    KL  +AE L E
Sbjct: 257 E-DVALSVPAVVGREGVVRILEIPLTEDE--EAKLQKSAEALKE 297

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 300

>gnl|CDD|130833 TIGR01772, MDH_euk_gproteo, malate dehydrogenase, NAD-dependent

 Score = 65.1 bits (159), Expect = 6e-12
 Identities = 58/191 (30%), Positives = 84/191 (43%), Gaps = 23/191 (12%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKMEL--VDAA 62
           +V V GAAG IG  L  ++         QP +  L + DI  AA    GV  +L  +  A
Sbjct: 1   KVAVLGAAGGIGQPLSLLLKL-------QPYVSELSLYDIAGAA----GVAADLSHIPTA 49

Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
              +KG         A  G ++ V+  G PRK GM R D+ + N  I K   +A+ +   
Sbjct: 50  -ASVKGFSGEEGLENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-C 107

Query: 123 PNCKVLVVANPANTN----ALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSD 178
           P   +LV+ NP N+     A +LK+     P   +  +T LD  RA   ++E        
Sbjct: 108 PKAMILVITNPVNSTVPIAAEVLKKKGVYDP-NKLFGVTTLDIVRANTFVAELKGKD-PM 165

Query: 179 VKNVIIWGNHS 189
             NV + G HS
Sbjct: 166 EVNVPVIGGHS 176

This model represents the NAD-dependent malate dehydrogenase found in eukaryotes and certain gamma proteobacteria. The enzyme is involved in the citric acid cycle as well as the glyoxalate cycle. Several isoforms exidt in eukaryotes. In S. cereviseae, for example, there are cytoplasmic, mitochondrial and peroxisomal forms. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases [Energy metabolism, TCA cycle]. Length = 312

>gnl|CDD|133422 cd01337, MDH_glyoxysomal_mitochondrial, Glyoxysomal and mitochondrial malate dehydrogenases

 Score = 63.3 bits (155), Expect = 2e-11
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 25/193 (12%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKMEL--VDA 61
           V+V V GAAG IG  L        +L    P++  L + DI        GV  +L  ++ 
Sbjct: 1   VKVAVLGAAGGIGQPLS-------LLLKLNPLVSELALYDI----VNTPGVAADLSHINT 49

Query: 62  AFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA 121
               + G +   +  +A  G ++ V+  G PRK GM R D+ + N  I +  A+A+ +  
Sbjct: 50  P-AKVTGYLGPEELKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA- 107

Query: 122 APNCKVLVVANPANTN----ALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVS 177
            P   +L+++NP N+     A +LK+     P K +  +T LD  RA   ++E L +  +
Sbjct: 108 CPKALILIISNPVNSTVPIAAEVLKKAGVYDP-KRLFGVTTLDVVRANTFVAELLGLDPA 166

Query: 178 DVK-NVIIWGNHS 189
            V   VI  G HS
Sbjct: 167 KVNVPVI--GGHS 177

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 310

>gnl|CDD|233562 TIGR01763, MalateDH_bact, malate dehydrogenase, NAD-dependent

 Score = 61.0 bits (148), Expect = 1e-10
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 22/290 (7%)

Query: 37  VILHMLDIPPAAEALNGVK---MELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPR 93
           V+L +++  P  +AL+  +   +   D         V  T+        +I V+  G PR
Sbjct: 29  VLLDVVEGIPQGKALDMYEASPVGGFDTK-------VTGTNNYADTANSDIVVITAGLPR 81

Query: 94  KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI 153
           K GM R+D++S N  I +     + +H +PN  ++VV+NP +    +  + +     + I
Sbjct: 82  KPGMSREDLLSMNAGIVREVTGRIMEH-SPNPIIVVVSNPLDAMTYVAWQKSGFPKERVI 140

Query: 154 TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVREL 213
                LD  R    I+ +L V V DV   ++ G H  +  P V ++TV       PV +L
Sbjct: 141 GQAGVLDSARFRTFIAMELGVSVQDVTACVL-GGHGDAMVPLVRYSTV----AGIPVADL 195

Query: 214 VKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVY 273
           +  +     E +   ++ G  I+   K  SA  A +++   + + +L   +   +    Y
Sbjct: 196 ISAERI--AEIVERTRKGGGEIVNLLKQGSAYYAPAASVVEMVEAILKDRKRV-LPCAAY 252

Query: 274 SDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSE 322
            DG Y +  G+    PV   +NG   I + L +D+     L+ +A+ + E
Sbjct: 253 LDGQYGI-DGIYVGVPVILGKNGVEHIYE-LKLDQSELALLNKSAKIVDE 300

This enzyme converts malate into oxaloacetate in the citric acid cycle. The critical residues which discriminate malate dehydrogenase from lactate dehydrogenase have been characterized , and have been used to set the cutoffs for this model. Sequences showing [aflimv][ap]R[rk]pgM[st] and [ltv][ilm]gGhgd were kept above trusted, while those in which the capitalized residues in the patterns were found to be Q, E and E were kept below the noise cutoff. Some sequences in the grey zone have been annotated as malate dehydrogenases, but none have been characterized. Phylogenetically, a clade of sequences from eukaryotes such as Toxoplasma and Plasmodium which include a characterized lactate dehydrogenase and show abiguous critical residue patterns appears to be more closely related to these bacterial sequences than other eukaryotic sequences. These are relatively long branch and have been excluded from the model. All other sequences falling below trusted appear to be phylogenetically outside of the clade including the trusted hits. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable [Energy metabolism, TCA cycle]. Length = 305

>gnl|CDD|133429 cd05293, LDH_1, A subgroup of L-lactate dehydrogenases

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 71/262 (27%), Positives = 106/262 (40%), Gaps = 36/262 (13%)

Query: 3   KEPVRVLVTGAAGQIGYALVPMI-ARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD- 60
           K   +V V G  GQ+G A    I A+G+    D+   L ++D+       + +K E +D 
Sbjct: 1   KPRNKVTVVGV-GQVGMACAISILAKGL---ADE---LVLVDVVE-----DKLKGEAMDL 48

Query: 61  ---AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 117
              +AF     + A  D         + ++  G  + EG  R D++ +NV I+K     L
Sbjct: 49  QHGSAFLKNPKIEADKD-YSVTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKL 107

Query: 118 EQHAAPNCKVLVVANPANTNALILKEFAPSI----PAKNITCLTRLDHNRALGQISEKLN 173
            +++ PN  +LVV+NP +    I+   A  +      + I     LD  R    I+E+L 
Sbjct: 108 VKYS-PNAILLVVSNPVD----IMTYVAWKLSGLPKHRVIGSGCNLDSARFRYLIAERLG 162

Query: 174 VQVSDVKNVIIWGNHSSSQYP---DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQ 230
           V  S V   II G H  S  P    VN A V       P     KD      E    V  
Sbjct: 163 VAPSSVHGWII-GEHGDSSVPVWSGVNVAGVRLQDL-NPDIGTDKDPEKWK-EVHKQVVD 219

Query: 231 RGAAIIKARKLSS---ALSAAS 249
               +IK +  +S    LS A 
Sbjct: 220 SAYEVIKLKGYTSWAIGLSVAD 241

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 312

>gnl|CDD|235340 PRK05086, PRK05086, malate dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 27/205 (13%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL- 65
           +V V GAAG IG AL  ++   +  G++    L + DI P      GV ++L      + 
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPAGSE----LSLYDIAPVTP---GVAVDLSHIPTAVK 54

Query: 66  LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA--P 123
           +KG  +  D   A  G ++ ++  G  RK GM+R D+ + N  I K   + +E+ A   P
Sbjct: 55  IKGF-SGEDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVK---NLVEKVAKTCP 110

Query: 124 NCKVLVVANPANTNALILKEF---APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
              + ++ NP NT   I  E    A       +  +T LD  R+   ++E    Q  +V+
Sbjct: 111 KACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVAELKGKQPGEVE 170

Query: 181 -NVIIWGNHSS-------SQYPDVN 197
             VI  G HS        SQ P V+
Sbjct: 171 VPVI--GGHSGVTILPLLSQVPGVS 193

Length = 312

>gnl|CDD|173376 PTZ00082, PTZ00082, L-lactate dehydrogenase; Provisional

 Score = 55.9 bits (135), Expect = 7e-09
 Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 15/153 (9%)

Query: 70  VATTDAVEACTGVNIAVMVGGFPRKEGME-----RKDVMSKNVSIYKAQASALEQHAAPN 124
           V  T+  E   G ++ ++  G  ++ G       R D++  N  I    A  ++++  PN
Sbjct: 63  VIGTNNYEDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC-PN 121

Query: 125 CKVLVVANPANTNALILKEFAPSIPAKNITC--LTRLDHNRALGQISEKLNVQVSDVKNV 182
             V+V+ NP +    +L+E    +P KN  C     LD +R    I+EKL V   DV   
Sbjct: 122 AFVIVITNPLDVMVKLLQE-HSGLP-KNKVCGMAGVLDSSRLRTYIAEKLGVNPRDVHAS 179

Query: 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK 215
           +I G H     P   + TV       P+ E +K
Sbjct: 180 VI-GAHGDKMVPLPRYVTVGGI----PLSEFIK 207

Length = 321

>gnl|CDD|215058 PLN00106, PLN00106, malate dehydrogenase

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 19/188 (10%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL--VDAAFP 64
           +V V GAAG IG  L  ++    ++       LH+ DI        GV  ++  ++    
Sbjct: 20  KVAVLGAAGGIGQPLSLLMKMNPLVSE-----LHLYDIANTP----GVAADVSHINTP-A 69

Query: 65  LLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN 124
            ++G +      +A  G ++ ++  G PRK GM R D+ + N  I K    A+ +H  PN
Sbjct: 70  QVRGFLGDDQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPN 128

Query: 125 CKVLVVANPANTN----ALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
             V +++NP N+     A +LK+ A     K +  +T LD  RA   ++EK  +  +DV 
Sbjct: 129 ALVNIISNPVNSTVPIAAEVLKK-AGVYDPKKLFGVTTLDVVRANTFVAEKKGLDPADV- 186

Query: 181 NVIIWGNH 188
           +V + G H
Sbjct: 187 DVPVVGGH 194

Length = 323

>gnl|CDD|178836 PRK00066, ldh, L-lactate dehydrogenase; Reviewed

 Score = 51.0 bits (123), Expect = 3e-07
 Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 32/178 (17%)

Query: 77  EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136
             C   ++ V+  G P+K G  R D++ KN+ I+K+    +      +   LV +NP + 
Sbjct: 69  SDCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS-GFDGIFLVASNPVD- 126

Query: 137 NALIL-----------KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIW 185
              IL           KE       + I   T LD  R    +SEKL+V    V   II 
Sbjct: 127 ---ILTYATWKLSGFPKE-------RVIGSGTSLDSARFRYMLSEKLDVDPRSVHAYII- 175

Query: 186 GNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQ--RGAA--IIKAR 239
           G H  +++P  +HA V       P+ E ++++   + E +  + +  R AA  II+ +
Sbjct: 176 GEHGDTEFPVWSHANV----AGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIEKK 229

Length = 315

>gnl|CDD|233566 TIGR01771, L-LDH-NAD, L-lactate dehydrogenase

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 30/172 (17%)

Query: 56  MELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAS 115
           M+L  AA  L       +     C   ++ V+  G P+K G  R +++ +NV I K+   
Sbjct: 39  MDLQHAASFLPTPKKIRSGDYSDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVP 98

Query: 116 ALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ-------- 167
            +   +  +   LV  NP +    IL   A          L+    NR +G         
Sbjct: 99  EV-VKSGFDGIFLVATNPVD----ILTYVAWK--------LSGFPKNRVIGSGTVLDTAR 145

Query: 168 ----ISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK 215
               ++EKL V    V   II G H  S+ P  + AT+    G  P+ + +K
Sbjct: 146 LRYLLAEKLGVDPQSVHAYII-GEHGDSEVPVWSSATI----GGVPLLDYLK 192

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases [Energy metabolism, Anaerobic, Energy metabolism, Glycolysis/gluconeogenesis]. Length = 299

>gnl|CDD|240360 PTZ00325, PTZ00325, malate dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 4e-06
 Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 19/190 (10%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL--VDAAF 63
            +V V GAAG IG  L  ++ +     ++    L + DI  A     GV  +L  +D   
Sbjct: 9   FKVAVLGAAGGIGQPL-SLLLKQNPHVSE----LSLYDIVGAP----GVAADLSHIDTP- 58

Query: 64  PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
             + G        +A  G ++ ++  G PRK GM R D+ + N  I +    A    +AP
Sbjct: 59  AKVTGYADGELWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVR-DLVAAVASSAP 117

Query: 124 NCKVLVVANPANTNALILKEFAPSI----PAKNITCLTRLDHNRALGQISEKLNVQVSDV 179
              V +V+NP N+   I  E         P K +  +T LD  RA   ++E L +   DV
Sbjct: 118 KAIVGIVSNPVNSTVPIAAETLKKAGVYDPRK-LFGVTTLDVVRARKFVAEALGMNPYDV 176

Query: 180 KNVIIWGNHS 189
            NV + G HS
Sbjct: 177 -NVPVVGGHS 185

Length = 321

>gnl|CDD|178212 PLN02602, PLN02602, lactate dehydrogenase

 Score = 47.5 bits (113), Expect = 5e-06
 Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 14/194 (7%)

Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           +   +V V G  G +G A+   I     L  D    L ++D+ P  + L G  ++L  AA
Sbjct: 35  RRHTKVSVVGV-GNVGMAIAQTI-----LTQDLADELALVDVNP--DKLRGEMLDLQHAA 86

Query: 63  --FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
              P  K ++A+TD      G ++ ++  G  +  G  R +++ +NV++++     L ++
Sbjct: 87  AFLPRTK-ILASTD-YAVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY 144

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
            +P+  +L+V+NP +    +  + +     + I   T LD +R    I++ L+V   DV+
Sbjct: 145 -SPDTILLIVSNPVDVLTYVAWKLSGFPANRVIGSGTNLDSSRFRFLIADHLDVNAQDVQ 203

Query: 181 NVIIWGNHSSSQYP 194
             I+ G H  S   
Sbjct: 204 AYIV-GEHGDSSVA 216

Length = 350

>gnl|CDD|133427 cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

 Score = 43.6 bits (104), Expect = 6e-05
 Identities = 67/288 (23%), Positives = 105/288 (36%), Gaps = 88/288 (30%)

Query: 77  EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK-------VLV 129
             C   +I V+  G P+K G  R D++ KN  I K           P  K        LV
Sbjct: 64  SDCKDADIVVITAGAPQKPGETRLDLLEKNAKIMK--------SIVPKIKASGFDGIFLV 115

Query: 130 VANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNVQVS 177
            +NP +    ++++            L+ L  NR +G             ++EKLNV   
Sbjct: 116 ASNPVDVITYVVQK------------LSGLPKNRVIGTGTSLDTARLRRALAEKLNV--- 160

Query: 178 DVKNVI--IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFI---TTVQQRG 232
           D ++V   + G H  SQ+   +  TV      KP+ +L+K+      +       V++ G
Sbjct: 161 DPRSVHAYVLGEHGDSQFVAWSTVTVGG----KPLLDLLKEGKLSELDLDEIEEDVRKAG 216

Query: 233 AAIIKARKLSS---ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYN-------VPA 282
             II  +  +    A + A      I   +L   E   + +  Y DG Y        VPA
Sbjct: 217 YEIINGKGATYYGIATALA-----RIVKAILND-ENAILPVSAYLDGEYGEKDVYIGVPA 270

Query: 283 GLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSC 330
                  +  RNG   ++           +LDLT EE    +    S 
Sbjct: 271 -------IIGRNGVEEVI-----------ELDLTEEEQ---EKFEKSA 297

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 306

>gnl|CDD|133428 cd05292, LDH_2, A subgroup of L-lactate dehydrogenases

 Score = 41.7 bits (99), Expect = 3e-04
 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)

Query: 56  MELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAS 115
           M+L     P +K V         C G ++ V+  G  +K G  R D++ +NV+I+K    
Sbjct: 43  MDLAHGT-PFVKPVRIYAGDYADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIP 101

Query: 116 ALEQHAAPNCKVLVVANPANTNALILKEFAPSI----PAKNITCLTRLDHNRALGQISEK 171
            + ++ AP+  +LVV NP +    +L   A  +    P + I   T LD  R    + E 
Sbjct: 102 QILKY-APDAILLVVTNPVD----VLTYVAYKLSGLPPNRVIGSGTVLDTARFRYLLGEH 156

Query: 172 LNVQVSDVKNVIIWGNHSSSQYPDVNHATV 201
           L V    V   II G H  S+    + A +
Sbjct: 157 LGVDPRSVHAYII-GEHGDSEVAVWSSANI 185

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 308

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	332
PRK05442	326	malate dehydrogenase; Provisional	100.0
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	100.0
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	100.0
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	100.0
PLN00112	444	malate dehydrogenase (NADP); Provisional	100.0
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	100.0
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	100.0
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	100.0
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	100.0
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	100.0
KOG1495	332	consensus Lactate dehydrogenase [Energy production	100.0
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	100.0
PLN00135	309	malate dehydrogenase	100.0
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	100.0
PLN02602	350	lactate dehydrogenase	100.0
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	100.0
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	100.0
TIGR01756	313	LDH_protist lactate dehydrogenase. This model repr	100.0
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	100.0
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	100.0
KOG1496	332	consensus Malate dehydrogenase [Energy production	100.0
PTZ00117	319	malate dehydrogenase; Provisional	100.0
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	100.0
PTZ00082	321	L-lactate dehydrogenase; Provisional	100.0
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	100.0
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	100.0
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	100.0
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	100.0
PTZ00325	321	malate dehydrogenase; Provisional	100.0
PRK06223	307	malate dehydrogenase; Reviewed	100.0
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	100.0
PLN00106	323	malate dehydrogenase	100.0
PRK05086	312	malate dehydrogenase; Provisional	100.0
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	100.0
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	100.0
PF02866	174	Ldh_1_C: lactate/malate dehydrogenase, alpha/beta	100.0
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	100.0
cd05197	425	GH4_glycoside_hydrolases Glycoside Hydrases Family	99.97
PRK15076	431	alpha-galactosidase; Provisional	99.97
cd05296	419	GH4_P_beta_glucosidase Glycoside Hydrolases Family	99.96
cd05298	437	GH4_GlvA_pagL_like Glycoside Hydrolases Family 4;	99.96
cd05297	423	GH4_alpha_glucosidase_galactosidase Glycoside Hydr	99.95
COG1486	442	CelF Alpha-galactosidases/6-phospho-beta-glucosida	99.93
PF02056	183	Glyco_hydro_4: Family 4 glycosyl hydrolase; InterP	99.77
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	99.03
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.93
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.91
COG1250	307	FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabo	98.84
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	98.83
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	98.83
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	98.75
KOG2304	298	consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid t	98.74
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.74
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.72
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.7
PRK11730	715	fadB multifunctional fatty acid oxidation complex	98.7
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	98.67
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	98.65
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	98.64
PLN02206	442	UDP-glucuronate decarboxylase	98.64
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.61
PLN00198	338	anthocyanidin reductase; Provisional	98.59
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.59
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.57
PLN02650	351	dihydroflavonol-4-reductase	98.56
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	98.56
PLN02427	386	UDP-apiose/xylose synthase	98.56
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.54
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.54
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	98.52
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	98.51
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	98.49
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	98.46
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.46
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.45
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	98.44
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	98.44
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.44
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.44
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.42
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	98.42
PLN02572	442	UDP-sulfoquinovose synthase	98.42
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.41
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	98.38
PLN02214	342	cinnamoyl-CoA reductase	98.38
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.38
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.38
PLN02896	353	cinnamyl-alcohol dehydrogenase	98.35
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.34
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	98.34
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	98.3
CHL00194	317	ycf39 Ycf39; Provisional	98.27
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	98.26
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.26
PLN02353	473	probable UDP-glucose 6-dehydrogenase	98.25
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.23
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.22
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	98.21
PLN02778	298	3,5-epimerase/4-reductase	98.2
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.19
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.18
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	98.18
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	98.17
PLN02260	668	probable rhamnose biosynthetic enzyme	98.17
PRK09135	249	pteridine reductase; Provisional	98.14
PLN02240	352	UDP-glucose 4-epimerase	98.14
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	98.14
PLN02583	297	cinnamoyl-CoA reductase	98.13
PRK06194	287	hypothetical protein; Provisional	98.11
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	98.08
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	98.07
PLN03209	576	translocon at the inner envelope of chloroplast su	98.06
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	98.05
PLN02686	367	cinnamoyl-CoA reductase	98.02
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	98.01
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.0
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	97.99
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	97.99
TIGR03376	342	glycerol3P_DH glycerol-3-phosphate dehydrogenase (	97.99
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.98
PRK12439	341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.97
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	97.96
PLN02653	340	GDP-mannose 4,6-dehydratase	97.96
PRK10675	338	UDP-galactose-4-epimerase; Provisional	97.95
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.95
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	97.94
PRK07067	257	sorbitol dehydrogenase; Provisional	97.93
PRK07806	248	short chain dehydrogenase; Provisional	97.93
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.92
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.9
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	97.89
PRK06180	277	short chain dehydrogenase; Provisional	97.88
PTZ00345	365	glycerol-3-phosphate dehydrogenase; Provisional	97.87
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.87
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	97.87
PRK05865	854	hypothetical protein; Provisional	97.86
PRK08265	261	short chain dehydrogenase; Provisional	97.86
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	97.85
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.85
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	97.85
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.84
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	97.83
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.82
PRK05717	255	oxidoreductase; Validated	97.81
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	97.81
PRK10538	248	malonic semialdehyde reductase; Provisional	97.8
PRK07326	237	short chain dehydrogenase; Provisional	97.78
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.78
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.77
PRK07825	273	short chain dehydrogenase; Provisional	97.76
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.76
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.75
PRK06500	249	short chain dehydrogenase; Provisional	97.75
PLN02253	280	xanthoxin dehydrogenase	97.74
PRK06172	253	short chain dehydrogenase; Provisional	97.73
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.73
PRK12746	254	short chain dehydrogenase; Provisional	97.73
PRK12937	245	short chain dehydrogenase; Provisional	97.72
PRK07856	252	short chain dehydrogenase; Provisional	97.72
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.71
PRK05875	276	short chain dehydrogenase; Provisional	97.71
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.69
PRK07201	657	short chain dehydrogenase; Provisional	97.69
PRK07890	258	short chain dehydrogenase; Provisional	97.69
PRK08339	263	short chain dehydrogenase; Provisional	97.69
PRK08278	273	short chain dehydrogenase; Provisional	97.69
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.69
PRK06482	276	short chain dehydrogenase; Provisional	97.67
PRK07774	250	short chain dehydrogenase; Provisional	97.66
PRK14982	340	acyl-ACP reductase; Provisional	97.66
PRK08264	238	short chain dehydrogenase; Validated	97.65
PRK06128	300	oxidoreductase; Provisional	97.65
PRK07478	254	short chain dehydrogenase; Provisional	97.65
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	97.65
PRK06138	252	short chain dehydrogenase; Provisional	97.65
PRK07069	251	short chain dehydrogenase; Validated	97.64
PRK12320	699	hypothetical protein; Provisional	97.63
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.63
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.63
PRK07576	264	short chain dehydrogenase; Provisional	97.63
PRK08643	256	acetoin reductase; Validated	97.61
PRK05876	275	short chain dehydrogenase; Provisional	97.61
PRK07680	273	late competence protein ComER; Validated	97.6
PRK09072	263	short chain dehydrogenase; Provisional	97.6
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.59
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.59
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.58
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.58
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.58
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	97.58
PRK12939	250	short chain dehydrogenase; Provisional	97.57
PRK07814	263	short chain dehydrogenase; Provisional	97.57
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.56
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.56
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.55
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.55
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.55
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.54
PRK07024	257	short chain dehydrogenase; Provisional	97.54
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.54
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	97.54
PRK08269	314	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.53
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.53
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.53
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.53
PRK08267	260	short chain dehydrogenase; Provisional	97.52
PRK05993	277	short chain dehydrogenase; Provisional	97.52
COG2910	211	Putative NADH-flavin reductase [General function p	97.52
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.52
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	97.52
PRK06179	270	short chain dehydrogenase; Provisional	97.52
PRK12828	239	short chain dehydrogenase; Provisional	97.52
PRK06701	290	short chain dehydrogenase; Provisional	97.51
PRK08263	275	short chain dehydrogenase; Provisional	97.51
PRK08655	437	prephenate dehydrogenase; Provisional	97.5
PRK07060	245	short chain dehydrogenase; Provisional	97.5
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.5
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	97.49
PRK07102	243	short chain dehydrogenase; Provisional	97.49
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	97.49
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.48
PRK06398	258	aldose dehydrogenase; Validated	97.48
PRK07417	279	arogenate dehydrogenase; Reviewed	97.48
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.47
PRK12829	264	short chain dehydrogenase; Provisional	97.46
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	97.46
PRK06101	240	short chain dehydrogenase; Provisional	97.46
PRK12742	237	oxidoreductase; Provisional	97.46
PRK12935	247	acetoacetyl-CoA reductase; Provisional	97.45
PRK12747	252	short chain dehydrogenase; Provisional	97.45
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.45
PRK08628	258	short chain dehydrogenase; Provisional	97.45
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.44
PRK07063	260	short chain dehydrogenase; Provisional	97.44
PRK06182	273	short chain dehydrogenase; Validated	97.44
PRK12744	257	short chain dehydrogenase; Provisional	97.43
PLN02260	668	probable rhamnose biosynthetic enzyme	97.42
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	97.42
PRK06914	280	short chain dehydrogenase; Provisional	97.42
PLN02688	266	pyrroline-5-carboxylate reductase	97.41
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.4
PRK06196	315	oxidoreductase; Provisional	97.4
PRK07985	294	oxidoreductase; Provisional	97.4
PRK05866	293	short chain dehydrogenase; Provisional	97.39
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	97.39
PRK06924	251	short chain dehydrogenase; Provisional	97.39
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.39
PRK06197	306	short chain dehydrogenase; Provisional	97.38
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.37
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	97.37
PRK07109	334	short chain dehydrogenase; Provisional	97.37
PRK08226	263	short chain dehydrogenase; Provisional	97.36
PRK07454	241	short chain dehydrogenase; Provisional	97.36
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	97.36
PRK08219	227	short chain dehydrogenase; Provisional	97.36
PRK06928	277	pyrroline-5-carboxylate reductase; Reviewed	97.35
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.35
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	97.34
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.34
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	97.34
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.33
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	97.32
PRK05884	223	short chain dehydrogenase; Provisional	97.32
PRK07832	272	short chain dehydrogenase; Provisional	97.32
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	97.31
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.3
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	97.3
PRK12827	249	short chain dehydrogenase; Provisional	97.29
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	97.29
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.29
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.28
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	97.27
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	97.26
PRK05867	253	short chain dehydrogenase; Provisional	97.26
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	97.25
PRK06841	255	short chain dehydrogenase; Provisional	97.25
PRK07035	252	short chain dehydrogenase; Provisional	97.23
PRK09134	258	short chain dehydrogenase; Provisional	97.23
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	97.23
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	97.23
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.23
PRK06198	260	short chain dehydrogenase; Provisional	97.23
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.22
PRK08589	272	short chain dehydrogenase; Validated	97.22
PRK12480	330	D-lactate dehydrogenase; Provisional	97.21
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	97.21
PRK09291	257	short chain dehydrogenase; Provisional	97.21
PRK09242	257	tropinone reductase; Provisional	97.2
PRK07578	199	short chain dehydrogenase; Provisional	97.2
PRK08703	239	short chain dehydrogenase; Provisional	97.19
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.19
PRK06139	330	short chain dehydrogenase; Provisional	97.18
KOG2711	372	consensus Glycerol-3-phosphate dehydrogenase/dihyd	97.18
PRK06181	263	short chain dehydrogenase; Provisional	97.17
PLN02996	491	fatty acyl-CoA reductase	97.16
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	97.13
PRK07074	257	short chain dehydrogenase; Provisional	97.12
PRK09009	235	C factor cell-cell signaling protein; Provisional	97.12
COG0677	436	WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas	97.11
PRK05650	270	short chain dehydrogenase; Provisional	97.11
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	97.11
PRK09186	256	flagellin modification protein A; Provisional	97.11
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	97.11
PRK06114	254	short chain dehydrogenase; Provisional	97.1
PRK06947	248	glucose-1-dehydrogenase; Provisional	97.1
TIGR01746	367	Thioester-redct thioester reductase domain. It has	97.1
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.1
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.09
PRK06125	259	short chain dehydrogenase; Provisional	97.09
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.09
PRK06057	255	short chain dehydrogenase; Provisional	97.09
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	97.08
PRK06523	260	short chain dehydrogenase; Provisional	97.08
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.08
PRK06123	248	short chain dehydrogenase; Provisional	97.07
PRK08177	225	short chain dehydrogenase; Provisional	97.06
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.05
PRK05693	274	short chain dehydrogenase; Provisional	97.05
PRK07577	234	short chain dehydrogenase; Provisional	97.04
PRK12367	245	short chain dehydrogenase; Provisional	97.03
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.02
PRK05855	582	short chain dehydrogenase; Validated	97.02
PLN02780	320	ketoreductase/ oxidoreductase	97.02
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.02
PRK08251	248	short chain dehydrogenase; Provisional	97.01
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.01
PRK06484	520	short chain dehydrogenase; Validated	97.01
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	97.0
PRK06484	520	short chain dehydrogenase; Validated	96.99
PRK07023	243	short chain dehydrogenase; Provisional	96.98
PRK07775	274	short chain dehydrogenase; Provisional	96.95
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	96.95
PRK07904	253	short chain dehydrogenase; Provisional	96.94
PRK06545	359	prephenate dehydrogenase; Validated	96.93
PRK06949	258	short chain dehydrogenase; Provisional	96.93
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.92
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.91
PLN00016	378	RNA-binding protein; Provisional	96.91
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.91
PRK08324	681	short chain dehydrogenase; Validated	96.9
PRK07062	265	short chain dehydrogenase; Provisional	96.89
KOG2305	313	consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid t	96.89
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.87
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.87
PRK12743	256	oxidoreductase; Provisional	96.85
PRK06483	236	dihydromonapterin reductase; Provisional	96.85
PRK12824	245	acetoacetyl-CoA reductase; Provisional	96.84
PRK05872	296	short chain dehydrogenase; Provisional	96.84
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.83
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.83
PRK05854	313	short chain dehydrogenase; Provisional	96.83
PRK08862	227	short chain dehydrogenase; Provisional	96.82
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	96.81
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.79
PLN02256	304	arogenate dehydrogenase	96.79
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.79
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.78
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.77
PRK08507	275	prephenate dehydrogenase; Validated	96.76
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.74
PTZ00431	260	pyrroline carboxylate reductase; Provisional	96.74
PRK07677	252	short chain dehydrogenase; Provisional	96.73
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.72
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.72
PRK15059	292	tartronate semialdehyde reductase; Provisional	96.7
PLN02503	605	fatty acyl-CoA reductase 2	96.68
PRK05599	246	hypothetical protein; Provisional	96.67
PRK06940	275	short chain dehydrogenase; Provisional	96.67
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.67
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.66
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.64
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.64
PRK06953	222	short chain dehydrogenase; Provisional	96.62
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.6
PRK07831	262	short chain dehydrogenase; Provisional	96.59
PRK06720	169	hypothetical protein; Provisional	96.55
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.52
PRK05479	330	ketol-acid reductoisomerase; Provisional	96.52
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.52
PRK07574	385	formate dehydrogenase; Provisional	96.51
PF11975	232	Glyco_hydro_4C: Family 4 glycosyl hydrolase C-term	96.51
cd05312	279	NAD_bind_1_malic_enz NAD(P) binding domain of mali	96.51
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	96.5
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.49
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.47
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	96.45
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.45
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.45
PRK07201	657	short chain dehydrogenase; Provisional	96.43
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.4
PRK07791	286	short chain dehydrogenase; Provisional	96.39
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.39
PRK13243	333	glyoxylate reductase; Reviewed	96.39
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.37
PRK06407	301	ornithine cyclodeaminase; Provisional	96.34
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.33
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.33
PF03949	255	Malic_M: Malic enzyme, NAD binding domain; InterPr	96.32
PLN02712	667	arogenate dehydrogenase	96.32
KOG2666	481	consensus UDP-glucose/GDP-mannose dehydrogenase [C	96.31
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	96.28
PRK08605	332	D-lactate dehydrogenase; Validated	96.28
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.26
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	96.25
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	96.24
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	96.24
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.24
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	96.22
PRK08291	330	ectoine utilization protein EutC; Validated	96.22
PRK08303	305	short chain dehydrogenase; Provisional	96.22
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.21
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.18
PLN03139	386	formate dehydrogenase; Provisional	96.16
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.16
PRK06141	314	ornithine cyclodeaminase; Validated	96.15
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	96.15
PRK08300	302	acetaldehyde dehydrogenase; Validated	96.15
PRK08017	256	oxidoreductase; Provisional	96.15
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	96.15
PRK07589	346	ornithine cyclodeaminase; Validated	96.13
PRK07340	304	ornithine cyclodeaminase; Validated	96.13
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.1
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.09
PRK08618	325	ornithine cyclodeaminase; Validated	96.06
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.06
cd00762	254	NAD_bind_malic_enz NAD(P) binding domain of malic	96.04
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.04
PRK07041	230	short chain dehydrogenase; Provisional	96.03
PLN02928	347	oxidoreductase family protein	96.02
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.0
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.99
PRK06823	315	ornithine cyclodeaminase; Validated	95.99
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.97
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.96
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.95
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.94
COG0345	266	ProC Pyrroline-5-carboxylate reductase [Amino acid	95.94
PLN02712	667	arogenate dehydrogenase	95.93
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	95.92
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.91
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	95.91
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	95.91
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.89
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.84
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.82
PRK14806	735	bifunctional cyclohexadienyl dehydrogenase/ 3-phos	95.79
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.78
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	95.77
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	95.75
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.74
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	95.72
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	95.71
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	95.66
PLN02858	1378	fructose-bisphosphate aldolase	95.65
PLN02383	344	aspartate semialdehyde dehydrogenase	95.65
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.65
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.61
PRK06199	379	ornithine cyclodeaminase; Validated	95.61
KOG0409	327	consensus Predicted dehydrogenase [General functio	95.6
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.59
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	95.58
PRK13304	265	L-aspartate dehydrogenase; Reviewed	95.58
PRK12557	342	H(2)-dependent methylenetetrahydromethanopterin de	95.56
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	95.53
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	95.52
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	95.48
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.47
PRK08818	370	prephenate dehydrogenase; Provisional	95.45
PLN02306	386	hydroxypyruvate reductase	95.44
KOG1208	314	consensus Dehydrogenases with different specificit	95.43
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.43
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.35
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	95.35
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	95.33
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	95.3
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.28
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	95.23
PRK06436	303	glycerate dehydrogenase; Provisional	95.22
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.17
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.16
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.15
PRK06046	326	alanine dehydrogenase; Validated	95.13
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.13
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	95.11
PRK13301	267	putative L-aspartate dehydrogenase; Provisional	95.1
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.09
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.08
PLN02494	477	adenosylhomocysteinase	95.01
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	95.0
PRK13940	414	glutamyl-tRNA reductase; Provisional	94.99
PLN02858	1378	fructose-bisphosphate aldolase	94.97
PLN03129	581	NADP-dependent malic enzyme; Provisional	94.96
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.96
PLN00203	519	glutamyl-tRNA reductase	94.95
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.95
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.88
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	94.85
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	94.83
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.83
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	94.82

>PRK05442 malate dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-73  Score=524.91  Aligned_cols=325  Identities=61%  Similarity=0.954  Sum_probs=292.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      -.+|+||+||||+|+||+++++.|+..++++...+.||+|+|+++++++++|+++||+|+.++...++.++++.+++++|
T Consensus         1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~d   80 (326)
T PRK05442          1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKD   80 (326)
T ss_pred             CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCC
Confidence            03567999999779999999999999998875566699999998766789999999999986555566777889999999


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHH
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDH  161 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds  161 (332)
                      ||+||++||.++++|++|++++..|+++++++++.|.++++|++++|++|||+|+||++++++++|+|++|++|.|.||+
T Consensus        81 aDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~LDs  160 (326)
T PRK05442         81 ADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNAPDLPAENFTAMTRLDH  160 (326)
T ss_pred             CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHcCCCCHHHEEeeeHHHH
Confidence            99999999999999999999999999999999999999987789999999999999999999955999999766699999


Q ss_pred             HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCc
Q 020022          162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKL  241 (332)
Q Consensus       162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~  241 (332)
                      +||++++|++++++|++|++++||||||+++||+||++++    +|.|+.+++.+++|..+++.+++++++++|+++||+
T Consensus       161 ~R~r~~la~~l~v~~~~V~~~vV~GeHG~s~~~~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~  236 (326)
T PRK05442        161 NRALSQLAAKAGVPVADIKKMTVWGNHSATQYPDFRHATI----DGKPAAEVINDQAWLEDTFIPTVQKRGAAIIEARGA  236 (326)
T ss_pred             HHHHHHHHHHhCcChHHeEEeEEEECCcCceeeccccCEE----CCEEHHHHccchhhHHHHHHHHHHhhHHHHHhCcCC
Confidence            9999999999999999999987799999999999999999    999999988666676679999999999999999999


Q ss_pred             cchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEecCCcEEEecCCCCCHHHHHHHHHHHHHHH
Q 020022          242 SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELS  321 (332)
Q Consensus       242 ~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  321 (332)
                      ++|.+++.++++++++++.++|+++++|+|++++|+||+|+|+|||+||++.+|+++++++++|+++|+++|++|++.|+
T Consensus       237 t~~~~a~~~~~~iv~ail~~~~~~~i~~~sv~~~g~ygi~~~v~~s~P~~ig~Gv~~iv~~l~L~~~E~~~l~~s~~~l~  316 (326)
T PRK05442        237 SSAASAANAAIDHVRDWVLGTPEGDWVSMGVPSDGSYGIPEGLIFGFPVTCENGEYEIVQGLEIDDFSREKIDATLAELE  316 (326)
T ss_pred             ccHHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCccCCcCCeEEEEEEEEcCcEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            99987664368988876665446999999999999999999999999998559999996668999999999999999999


Q ss_pred             HHHHHHhhh
Q 020022          322 EEKALAYSC  330 (332)
Q Consensus       322 ~~~~~~~~~  330 (332)
                      ++.+.+-..
T Consensus       317 ~~~~~~~~~  325 (326)
T PRK05442        317 EERDAVKHL  325 (326)
T ss_pred             HHHHHHHhh
Confidence            999887654

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=100.00  E-value=6.1e-73  Score=524.60  Aligned_cols=319  Identities=64%  Similarity=0.992  Sum_probs=289.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ++|.||+||||+|+||+++++.|+..++++.+..+||+|+|++++.++++|+++||+|++.+...++.++++.+++++||
T Consensus         1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~da   80 (323)
T TIGR01759         1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDV   80 (323)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCC
Confidence            36789999997699999999999999887755566999999986557789999999999865555666777889999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN  162 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~  162 (332)
                      |+||++||.++++|++|++++..|++++++++++|.+++||++++|++|||+|+||++++++++|+|++|++|+|.|||+
T Consensus        81 DvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~LDs~  160 (323)
T TIGR01759        81 DAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIASKNAPDIPPKNFSAMTRLDHN  160 (323)
T ss_pred             CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEeeHHHHH
Confidence            99999999999999999999999999999999999999976899999999999999999999439999997667999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS  242 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~  242 (332)
                      ||++++|++++++|++|+.++||||||+++||+||++++    +|+|+.+++.++.|..+++.+++++++++|+++||++
T Consensus       161 R~r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t  236 (323)
T TIGR01759       161 RAKYQLAAKAGVPVSDVKNVIIWGNHSNTQVPDFTHATV----DGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEARGAS  236 (323)
T ss_pred             HHHHHHHHHhCcChHHeEEeEEEecCCCceeeccccCEE----CCccHHHHhcchhhHHHHHHHHHHhhHHHHHhccCCc
Confidence            999999999999999998787899999999999999999    9999999877655656899999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHcCCCC--ceEEEeeeecCC-CCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          243 SALSAASSACDHIRDWVLGTPE--GTWVSMGVYSDG-SYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       243 ~~~~~a~~~~~~i~~~i~~~~~--~~i~~~sv~~~g-~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      +|+++|.++++++.+ +.+| +  ++++|+|++++| +||+|+|+|||+||++ ++|+++++++++|+++|+++|++|++
T Consensus       237 ~~~~~a~a~~~iv~a-il~~-~~~~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l~L~~~E~~~l~~sa~  314 (323)
T TIGR01759       237 SAASAANAAIDHVRD-WVTG-TPEGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGLPLDDFVRGKLDATED  314 (323)
T ss_pred             chHHHHHHHHHHHHH-HHcC-CCCCcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHH
Confidence            987777789998876 4455 5  899999999999 9999899999999997 99999998768999999999999999


Q ss_pred             HHHHHHHHH
Q 020022          319 ELSEEKALA  327 (332)
Q Consensus       319 ~i~~~~~~~  327 (332)
                      .|+++++.+
T Consensus       315 ~lk~~~~~~  323 (323)
T TIGR01759       315 ELLEEKEEA  323 (323)
T ss_pred             HHHHHHhcC
Confidence            999998753

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=100.00  E-value=1.5e-71  Score=522.41  Aligned_cols=322  Identities=43%  Similarity=0.692  Sum_probs=292.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +|.||+||||+|+||+++++.|+..++++++++++|+|+|++.++++++|+++||+|+.+++..+++++++.+++++|||
T Consensus        43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~~kdaD  122 (387)
T TIGR01757        43 KTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYEVFEDAD  122 (387)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCCHHHhCCCC
Confidence            57899999977999999999999999988777788999966555789999999999998666556777788899999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~  162 (332)
                      +||++||.|+++|++|.+++..|+++++++++.|.++++|++++|++|||+|+||+++++. +|+|++| |++||.||++
T Consensus       123 IVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~k~-sg~~~~rviG~gT~LDsa  201 (387)
T TIGR01757       123 WALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAMKN-APNIPRKNFHALTRLDEN  201 (387)
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHHHH-cCCCcccEEEecchhHHH
Confidence            9999999999999999999999999999999999998878999999999999999999998 5776666 7899999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS  242 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~  242 (332)
                      ||+++||+++++++++|+..+||||||++|||+||+++|    +|+|+.+++.++.|..+++.+++++++++|++.||++
T Consensus       202 R~r~~LA~~l~v~~~~V~~~~V~GeHGds~vp~~S~a~V----~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~~KG~t  277 (387)
T TIGR01757       202 RAKCQLALKSGKFYTSVSNVTIWGNHSTTQVPDFVNAKI----GGRPAKEVIKDTKWLEEEFTPTVQKRGGALIKKWGRS  277 (387)
T ss_pred             HHHHHHHHHHCcChhHcceeEEEecCCCcEEecceeeEE----CCEEhHHhcccccchHHHHHHHHHHHHHHHHhccCch
Confidence            999999999999999997555799999999999999999    9999999887666777899999999999999999988


Q ss_pred             chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEe-cCCCCCHHHHHHHHHHHHH
Q 020022          243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIV-QGLSIDEFSRKKLDLTAEE  319 (332)
Q Consensus       243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~-~~~~l~~~E~~~l~~s~~~  319 (332)
                      +|+++|.++++.+++|+.+.++++++|+|++++|+ ||+|+|+|||+||++ ++|+++++ + ++|+++|+++|++|++.
T Consensus       278 ~~~s~a~ai~~~i~ai~~g~d~~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~-l~L~~~E~~~l~~Sa~~  356 (387)
T TIGR01757       278 SAASTAVSIADAIKSLVVPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATD-VSMDDFLRERIRKSEDE  356 (387)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCC-CCCCHHHHHHHHHHHHH
Confidence            88777888999998877554489999999999996 999899999999997 89999996 6 99999999999999999


Q ss_pred             HHHHHHHHhhhh
Q 020022          320 LSEEKALAYSCL  331 (332)
Q Consensus       320 i~~~~~~~~~~~  331 (332)
                      |+++.+.+...+
T Consensus       357 L~~e~~~~~~~~  368 (387)
T TIGR01757       357 LLKEKECVAHLI  368 (387)
T ss_pred             HHHHHHHHHHhh
Confidence            999998886643

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=3.9e-71  Score=502.72  Aligned_cols=307  Identities=34%  Similarity=0.478  Sum_probs=281.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-ChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-~~~~al~~aDi   84 (332)
                      +||+|||| |+||+++++.|+..++..     |++|+|++  +++++|.++||.|+..+......++. +.+++++|||+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~-----el~LiDi~--~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDi   72 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGS-----ELVLIDIN--EEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADI   72 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccc-----eEEEEEcc--cccccchhcchhhcchhccCceEEecCCChhhhcCCCE
Confidence            59999995 999999999997776543     89999999  47899999999999876655565554 55899999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHHH
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNR  163 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r  163 (332)
                      ||++||.||+|||+|+|++..|++|+++++++|.++| |+++++++|||+|+|||+++++ +|+|++| |+++|.||++|
T Consensus        73 VvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~-~d~ivlVvtNPvD~~ty~~~k~-sg~p~~rvig~gt~LDsaR  150 (313)
T COG0039          73 VVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA-PDAIVLVVTNPVDILTYIAMKF-SGFPKNRVIGSGTVLDSAR  150 (313)
T ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCeEEEEecCcHHHHHHHHHHh-cCCCccceecccchHHHHH
Confidence            9999999999999999999999999999999999999 4899999999999999999998 7899888 79999999999


Q ss_pred             HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhh-hcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022          164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK-DDAWLNGEFITTVQQRGAAIIKARKLS  242 (332)
Q Consensus       164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~-~~~~~~~~~~~~v~~~~~~i~~~kg~~  242 (332)
                      |+++||+++++++++|++++ +|+||++|||+||+++|    +|+|+.++++ .+.|..+++.+++++++++|++.||+.
T Consensus       151 ~~~~lae~~~v~~~~V~~~V-iGeHGdt~vp~~S~a~v----~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~kG~~  225 (313)
T COG0039         151 FRTFLAEKLGVSPKDVHAYV-IGEHGDTMVPLWSQATV----GGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAKGAG  225 (313)
T ss_pred             HHHHHHHHhCCChhHceeeE-eccCCCceEEeeeeeeE----CCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHccCcc
Confidence            99999999999999999885 79999999999999999    9999999988 566777899999999999999999764


Q ss_pred             chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHH
Q 020022          243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELS  321 (332)
Q Consensus       243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  321 (332)
                      +++++|.+++++.++ |+.| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|+
T Consensus       226 t~~~~A~a~a~~~~a-il~d-~~~vl~~s~~l~G~yg~-~dv~~gvP~~lg~~Gv~~iie-~~l~~~E~~~l~~s~~~lk  301 (313)
T COG0039         226 TYYGPAAALARMVEA-ILRD-EKRVLPVSVYLDGEYGV-EDVYFGVPAVLGKNGVEEILE-LLLSDDEQEKLDKSAEELK  301 (313)
T ss_pred             chhhHHHHHHHHHHH-HHcC-CCceEEEEEeecCccCc-CCeEEEeeEEEcCCCcEEEec-CCCCHHHHHHHHHHHHHHH
Confidence            677888889997765 6667 89999999999999994 99999999997 999999998 9999999999999999999


Q ss_pred             HHHHHHhhhh
Q 020022          322 EEKALAYSCL  331 (332)
Q Consensus       322 ~~~~~~~~~~  331 (332)
                      +.++.+..++
T Consensus       302 ~~i~~~~~~~  311 (313)
T COG0039         302 KNIELVKELV  311 (313)
T ss_pred             HHHHHHHHhh
Confidence            9999998875

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=100.00  E-value=5e-70  Score=518.95  Aligned_cols=320  Identities=40%  Similarity=0.632  Sum_probs=290.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCce--EEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPV--ILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~--ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      ++.||+||||+|+||+++++.|+..+++++++++  ||+|+|++  +++++|+++||+|+.+++..++.++++.+++++|
T Consensus        99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~--~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kd  176 (444)
T PLN00112         99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERS--KQALEGVAMELEDSLYPLLREVSIGIDPYEVFQD  176 (444)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCC--cchhHHHHHHHHHhhhhhcCceEEecCCHHHhCc
Confidence            4689999997799999999999999888765555  89999988  4789999999999987666677777889999999


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-cCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechH
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH-AAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRL  159 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~l  159 (332)
                      ||+||++||.|+++|++|.|++..|+++++++++.|.++ + |++++|++|||+|+||+++++. +|+++++ |+.||.|
T Consensus       177 aDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~-p~~ivIVVsNPvDv~t~v~~k~-sg~~~~rViGtgT~L  254 (444)
T PLN00112        177 AEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVAS-RNVKVIVVGNPCNTNALICLKN-APNIPAKNFHALTRL  254 (444)
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEcCCcHHHHHHHHHHH-cCCCCcceEEeeccH
Confidence            999999999999999999999999999999999999995 6 6899999999999999999998 5766666 8999999


Q ss_pred             HHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhc
Q 020022          160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKAR  239 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~k  239 (332)
                      |++||+++||+++++++++|++++||||||++|||+||+++|    +|+|+.+++.++.|+.+++.+++++++++|+++|
T Consensus       255 DsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsqvp~wS~a~V----~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~~k  330 (444)
T PLN00112        255 DENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKI----NGLPVKEVITDHKWLEEEFTPKVQKRGGVLIKKW  330 (444)
T ss_pred             HHHHHHHHHHHHhCcCHHHcccceEEecCCCceeeccceeEE----CCccHHHhhccccchHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999997766799999999999999999    9999999987767877899999999999999999


Q ss_pred             CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCC-CCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHH
Q 020022          240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTA  317 (332)
Q Consensus       240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g-~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~  317 (332)
                      |+++++++|.+++++|.+|+.+.++++++|+|++++| +||+|+|+|||+||++ ++|+++++++++|+++|+++|++|+
T Consensus       331 G~t~~~s~a~ai~~~I~ail~~~d~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el~L~~~E~~~l~~Sa  410 (444)
T PLN00112        331 GRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDVEIDDYLRERIKKSE  410 (444)
T ss_pred             CchhHHHHHHHHHHHHHHHHcCCCCCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCCCCCHHHHHHHHHHH
Confidence            9888877788999999887655448999999999999 5999899999999997 8999999933999999999999999


Q ss_pred             HHHHHHHHHHhhhh
Q 020022          318 EELSEEKALAYSCL  331 (332)
Q Consensus       318 ~~i~~~~~~~~~~~  331 (332)
                      ++|.++.+.+...+
T Consensus       411 ~~L~~e~~~~~~~~  424 (444)
T PLN00112        411 AELLAEKRCVAHLT  424 (444)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999998886553

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=100.00  E-value=1.5e-69  Score=502.71  Aligned_cols=317  Identities=56%  Similarity=0.862  Sum_probs=288.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +|+||+||||+|+||+++++.|+..++++++.++||+|+|++++.++++|+++||+|++++...+++++++.+++++|||
T Consensus         1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD   80 (322)
T cd01338           1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDAD   80 (322)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCC
Confidence            47899999966999999999999999988667779999999876677999999999998665556777788899999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR  163 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r  163 (332)
                      +||++||.++++|++|.+++..|+++++++++.|.+++||++++|++|||+|+||++++++++++|+++++|.|.||++|
T Consensus        81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~R  160 (322)
T cd01338          81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNR  160 (322)
T ss_pred             EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHHHHHH
Confidence            99999999999999999999999999999999999999668999999999999999999984369999976779999999


Q ss_pred             HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccc
Q 020022          164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS  243 (332)
Q Consensus       164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~  243 (332)
                      |++.+|+++|+++++|++++|||+||+++||+||++++    +|.|+.+++.+..|..+++.+++++++++|+++||+++
T Consensus       161 l~~~la~~lgv~~~~v~~~~V~GeHG~s~vp~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t~  236 (322)
T cd01338         161 AKSQLAKKAGVPVTDVKNMVIWGNHSPTQYPDFTNATI----GGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKARGASS  236 (322)
T ss_pred             HHHHHHHHhCcChhHeEEEEEEeCCcccEEEehhhcEE----CCEeHHHhcChHhhHHHHHHHHHHhhHHHHHhCcCCcc
Confidence            99999999999999999888899999999999999999    99999888766566678999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHcCCCC--ceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHH
Q 020022          244 ALSAASSACDHIRDWVLGTPE--GTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEEL  320 (332)
Q Consensus       244 ~~~~a~~~~~~i~~~i~~~~~--~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  320 (332)
                      |.+++.++++++.+++ +| +  ++++|+|++++|+||+|+|+|||+||++ ++|++++++ ++|+++|+++|++|++.|
T Consensus       237 ~~~~a~a~~~iv~ail-~~-~~~~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~l  313 (322)
T cd01338         237 AASAANAAIDHMRDWV-LG-TPEGDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEG-LEIDDFAREKIDATLAEL  313 (322)
T ss_pred             HHHHHHHHHHHHHHHh-cC-CCCCeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeC-CCCCHHHHHHHHHHHHHH
Confidence            8776568999887655 45 5  6999999999999999999999999987 999999997 999999999999999999


Q ss_pred             HHHHHHH
Q 020022          321 SEEKALA  327 (332)
Q Consensus       321 ~~~~~~~  327 (332)
                      +++.+.+
T Consensus       314 ~~~~~~~  320 (322)
T cd01338         314 LEEREAV  320 (322)
T ss_pred             HHHHHHh
Confidence            9998765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00704 MDH Malate dehydrogenase

Probab=100.00  E-value=3.7e-69  Score=500.17  Aligned_cols=315  Identities=57%  Similarity=0.880  Sum_probs=282.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      .||+||||+|+||+++++.|+..++++.+...+++|+|+++..++++++++||.|+..+..+.+.++++.+++++|||+|
T Consensus         1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiV   80 (323)
T cd00704           1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVA   80 (323)
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEE
Confidence            48999997799999999999999988744455799999985336789999999999766555566767889999999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC-CCCCcEEEechHHHHHH
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS-IPAKNITCLTRLDHNRA  164 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~-~~~~~i~~~t~lds~r~  164 (332)
                      |++||.++++|++|.+++..|+++++++++.|+++|.|++++|++|||+|+||++++++ +| +|++|++|+|.|||+||
T Consensus        81 VitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~-sg~~p~~~vig~t~LDs~R~  159 (323)
T cd00704          81 ILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIALKN-APNLPPKNFTALTRLDHNRA  159 (323)
T ss_pred             EEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHH-cCCCCHHHEEEeeHHHHHHH
Confidence            99999999999999999999999999999999999646899999999999999999999 67 69999767799999999


Q ss_pred             HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhh---hhcccchhHHHHHHHhhHHHHHHhcCc
Q 020022          165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV---KDDAWLNGEFITTVQQRGAAIIKARKL  241 (332)
Q Consensus       165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~---~~~~~~~~~~~~~v~~~~~~i~~~kg~  241 (332)
                      ++++|++++++|++|++++||||||+++||+||+++|    +|.|+.++.   .++.|..+++.+++++++++|+++||+
T Consensus       160 r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~kg~  235 (323)
T cd00704         160 KAQVARKLGVRVSDVKNVIIWGNHSNTQVPDLSNAVV----YGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKKRGA  235 (323)
T ss_pred             HHHHHHHhCcCHHHceeeeEEecccCceeecccccee----cCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhccCc
Confidence            9999999999999998777899999999999999999    999998874   233566678999999999999999999


Q ss_pred             cchHHHHHHHHHHHHHHHcCCCCc--eEEEeeeecCCCC-CCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHH
Q 020022          242 SSALSAASSACDHIRDWVLGTPEG--TWVSMGVYSDGSY-NVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTA  317 (332)
Q Consensus       242 ~~~~~~a~~~~~~i~~~i~~~~~~--~i~~~sv~~~g~y-gi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~  317 (332)
                      ++|+++|.++++++.+++ +| ++  +++|+|++++|+| |+|+|+|||+||++ ++||+++++ ++|+++|+++|++|+
T Consensus       236 t~~~~~a~a~~~iv~ail-~~-~~~~~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~-l~L~~~E~~~l~~s~  312 (323)
T cd00704         236 SSAASAAKAIADHVKDWL-FG-TPPGEIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVED-LKLNDWLREKLKATE  312 (323)
T ss_pred             chhHHHHHHHHHHHHHHH-hC-CCCCcEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecC-CCCCHHHHHHHHHHH
Confidence            998766778999887755 45 66  9999999999999 99999999999987 999999987 999999999999999


Q ss_pred             HHHHHHHHHHh
Q 020022          318 EELSEEKALAY  328 (332)
Q Consensus       318 ~~i~~~~~~~~  328 (332)
                      +.|+++.+.++
T Consensus       313 ~~l~~~~~~~~  323 (323)
T cd00704         313 EELIEEKEIAL  323 (323)
T ss_pred             HHHHHHHHhhC
Confidence            99999988763

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=100.00  E-value=2.5e-68  Score=495.82  Aligned_cols=320  Identities=70%  Similarity=1.066  Sum_probs=286.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +|.||+||||+|+||+++++.|+..++++++...+|+|+|++++.++++++++|+.|++.++..+++...+++++++|||
T Consensus         1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aD   80 (325)
T cd01336           1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVD   80 (325)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCC
Confidence            47899999988999999999999988775333348999999765566888999999987655556666677789999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR  163 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r  163 (332)
                      +|||+||.+++++++|.+++..|+++++++++.|.++++|++++|++|||+|+||++++++++++|+++|+++|.||++|
T Consensus        81 iVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs~R  160 (325)
T cd01336          81 VAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHNR  160 (325)
T ss_pred             EEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHHHH
Confidence            99999999999999999999999999999999999998678999999999999999999996688888899999999999


Q ss_pred             HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCC----CcchhhhhhhcccchhHHHHHHHhhHHHHHHhc
Q 020022          164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG----EKPVRELVKDDAWLNGEFITTVQQRGAAIIKAR  239 (332)
Q Consensus       164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~----g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~k  239 (332)
                      |++++|+++++++++|++++||||||++|||+||++++    +    |+|+.+++.++.|..+++.+++++++++|++.|
T Consensus       161 ~r~~la~~l~v~~~~v~~~~V~GeHG~s~~~~~S~~~v----~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~~  236 (325)
T cd01336         161 AKSQIALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATV----ELNGKGKPAREAVKDDAWLNGEFISTVQKRGAAVIKAR  236 (325)
T ss_pred             HHHHHHHHhCcChhhceEeEEEEcCCCCeeecccccee----ecCCCCccHHHHhcccchhHHHHHHHHHhhHHHHHHcc
Confidence            99999999999999998887899999999999999999    8    999999887666767899999999999999975


Q ss_pred             CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      ++++++++|.++++++++++.+.++++++|+|++++|+||+|+|+|||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       237 ~g~t~~~~a~~~~~i~~ail~~~~~~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~-~~L~~~E~~~l~~s~~  315 (325)
T cd01336         237 KLSSAMSAAKAICDHVHDWWFGTPEGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQG-LSIDDFSREKIDATAK  315 (325)
T ss_pred             ccchHHHHHHHHHHHHHHHHcCCCCCeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecC-CCCCHHHHHHHHHHHH
Confidence            54566667778999888755542358999999999999999999999999997 999999997 9999999999999999


Q ss_pred             HHHHHHHHHh
Q 020022          319 ELSEEKALAY  328 (332)
Q Consensus       319 ~i~~~~~~~~  328 (332)
                      .|+++++.++
T Consensus       316 ~l~~e~~~~~  325 (325)
T cd01336         316 ELVEEKETAL  325 (325)
T ss_pred             HHHHHHHhhC
Confidence            9999998763

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=1.4e-67  Score=489.91  Aligned_cols=317  Identities=70%  Similarity=1.083  Sum_probs=277.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEE
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV   86 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi   86 (332)
                      ||+||||+|+||+++++.|+..++++.+++++++|+|++++.++++++++||.|++.+....+..+++.+++++|||+||
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV   80 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI   80 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence            69999977999999999999988876434457999999876667899999999998655555555557799999999999


Q ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHHHHH
Q 020022           87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG  166 (332)
Q Consensus        87 ~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~  166 (332)
                      ++||.+++++++|.+++..|+++++++++.|.++++|++++|++|||+|+||++++++++++|++.|++||.|||+||++
T Consensus        81 itAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg~~~~~vig~gt~LDs~R~r~  160 (324)
T TIGR01758        81 LVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAPSIPPKNFSALTRLDHNRALA  160 (324)
T ss_pred             EcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCcceEEEeeehHHHHHHH
Confidence            99999999999999999999999999999999996468999999999999999999995455656689999999999999


Q ss_pred             HHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCC-C---cchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022          167 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG-E---KPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS  242 (332)
Q Consensus       167 ~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~-g---~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~  242 (332)
                      ++|++++++|++|++++||||||+++||+||+++|    + |   +|+.+++.++.|+.+++.+++++++++|++.||++
T Consensus       161 ~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~~  236 (324)
T TIGR01758       161 QVAERAGVPVSDVKNVIIWGNHSSTQYPDVNHATV----TKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRARKLS  236 (324)
T ss_pred             HHHHHhCCChhhceEeEEEECCCCCccccccccee----cCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhccCCC
Confidence            99999999999998766799999999999999999    8 9   99999876655666899999999999999988766


Q ss_pred             chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHH
Q 020022          243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEEL  320 (332)
Q Consensus       243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  320 (332)
                      +++++|.++++++++++.+.++++++|+|++++|+ ||+|+|+|||+||++ ++|++.+.+ ++|+++|+++|++|++.|
T Consensus       237 t~~~ia~~~~~i~~ai~~~~~~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~e-l~L~~~E~~~l~~s~~~l  315 (324)
T TIGR01758       237 SALSAAKAAVDQMHDWVLGTPEGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEG-LCVDDSSRKKLALTAKEL  315 (324)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecC-CCCCHHHHHHHHHHHHHH
Confidence            67777888999888755332389999999999999 999899999999997 455555554 999999999999999999


Q ss_pred             HHHHHHHh
Q 020022          321 SEEKALAY  328 (332)
Q Consensus       321 ~~~~~~~~  328 (332)
                      ++.++.+.
T Consensus       316 k~~~~~~~  323 (324)
T TIGR01758       316 EEERDEAL  323 (324)
T ss_pred             HHHHHHhh
Confidence            99998874

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=1.7e-67  Score=485.80  Aligned_cols=298  Identities=20%  Similarity=0.312  Sum_probs=269.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-cceEeeCChhhhcCCCcEE
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~~~~~~~~~~~al~~aDiV   85 (332)
                      ||+||| +|+||+++|+.|+..++++     |++|+|+++  ++++|+++||+|...... .+++++++.+++++|||+|
T Consensus         1 Ki~IIG-aG~VG~~~a~~l~~~~~~~-----elvL~Di~~--~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIG-AGHVGSAVLNYALALGLFS-----EIVLIDVNE--GVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADII   72 (307)
T ss_pred             CEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--chhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEE
Confidence            799999 5999999999999998877     999999984  788999999999764332 3556666779999999999


Q ss_pred             EEeCCCCCCCCCC--HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHH
Q 020022           86 VMVGGFPRKEGME--RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN  162 (332)
Q Consensus        86 i~~ag~~~~~~~~--r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~  162 (332)
                      |++||.+++||++  |+|++..|+++++++++.+.+++ |++++|++|||+|+||++++++ +|+|++| |+.||.|||+
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~-p~~i~ivvsNPvDv~t~~~~k~-sg~p~~rviG~gt~LDs~  150 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT-KEAVIILITNPLDIAVYIAATE-FDYPANKVIGTGTMLDTA  150 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecCcHHHHHHHHHHH-hCcChhheecccchHHHH
Confidence            9999999999999  69999999999999999999999 6899999999999999999998 7999998 6778999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh---cccchhHHHHHHHhhHHHHHHhc
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD---DAWLNGEFITTVQQRGAAIIKAR  239 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~---~~~~~~~~~~~v~~~~~~i~~~k  239 (332)
                      ||++++|+++|++|++|+++ ||||||++|||+||++++    +|.|+.++++.   +.|..+++.+++++++++|+++|
T Consensus       151 R~~~~la~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~v----~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~K  225 (307)
T cd05290         151 RLRRIVADKYGVDPKNVTGY-VLGEHGSHAFPVWSLVNI----AGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNRK  225 (307)
T ss_pred             HHHHHHHHHhCCCcccEEEE-EEecCCCceEEeeeeeEE----CCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHcc
Confidence            99999999999999999988 589999999999999999    99999988742   23345789999999999999999


Q ss_pred             CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      |+++|.. |.++++++.+ |+.| +++++|+|++++|+|| ++|+|+|+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       226 G~t~~~i-a~a~~~ii~a-il~d-~~~v~~vsv~~~G~yg-~~~v~~svP~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~  300 (307)
T cd05290         226 GWTNAGI-AKSASRLIKA-ILLD-ERSILPVCTLLSGEYG-LSDVALSLPTVIGAKGIERVLE-IPLDEWELEKLHKSAK  300 (307)
T ss_pred             CeehHHH-HHHHHHHHHH-HHhC-CCeEEEEEEeeCCccC-CCCEEEEEEEEEeCCCceEecC-CCCCHHHHHHHHHHHH
Confidence            9888765 5688997766 6667 8999999999999999 589999999997 999999998 9999999999999999


Q ss_pred             HHHHHH
Q 020022          319 ELSEEK  324 (332)
Q Consensus       319 ~i~~~~  324 (332)
                      .|++.+
T Consensus       301 ~i~~~~  306 (307)
T cd05290         301 AIRETI  306 (307)
T ss_pred             HHHHHh
Confidence            999864

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.3e-67  Score=455.97  Aligned_cols=299  Identities=24%  Similarity=0.352  Sum_probs=272.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~aD   83 (332)
                      ..||+|+| +|.||.+++..++.+++..     |++|+|.++  ++++|++|||+|++..+ .+++.... +|.+.++++
T Consensus        20 ~~KItVVG-~G~VGmAca~siL~k~Lad-----el~lvDv~~--dklkGE~MDLqH~s~f~~~~~V~~~~-Dy~~sa~S~   90 (332)
T KOG1495|consen   20 HNKITVVG-VGQVGMACAISILLKGLAD-----ELVLVDVNE--DKLKGEMMDLQHGSAFLSTPNVVASK-DYSVSANSK   90 (332)
T ss_pred             CceEEEEc-cchHHHHHHHHHHHhhhhh-----ceEEEecCc--chhhhhhhhhccccccccCCceEecC-cccccCCCc
Confidence            36999999 7999999999999999876     999999985  78999999999987533 35665554 578899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~  162 (332)
                      +||+|||..+++|++|.+++++|+.+++.+.+.+.+|. |++++|++|||+|+|||+.|++ +|||.+| ||.||.|||+
T Consensus        91 lvIiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~yS-pd~~llvvSNPVDilTYv~wKL-SgfP~nRViGsGcnLDsa  168 (332)
T KOG1495|consen   91 LVIITAGARQSEGESRLDLVQRNVDIFKAIIPALVKYS-PDCILLVVSNPVDILTYVTWKL-SGFPKNRVIGSGCNLDSA  168 (332)
T ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecCchHHHHHHHHHH-cCCcccceeccCcCccHH
Confidence            99999999999999999999999999999999999997 7999999999999999999999 8999998 7889999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh-------cccchhHHHHHHHhhHHHH
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD-------DAWLNGEFITTVQQRGAAI  235 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~-------~~~~~~~~~~~v~~~~~~i  235 (332)
                      ||+++++++||++|+++++++ +||||++.||+||.+.|    .|.++.++..+       +.|  +++.+++.+.+|||
T Consensus       169 RFryLi~~~Lg~~pss~hgwI-iGEHGdSsV~vWSgvni----AGv~l~~l~~~~~t~~d~e~w--~eihK~v~~sayev  241 (332)
T KOG1495|consen  169 RFRYLIGNRLGVHPSSCHGWI-IGEHGDSSVPVWSGVNI----AGVSLKDLNPDLGTDYDPENW--KEIHKQVVDSAYEV  241 (332)
T ss_pred             HHHHHHHHHhCCCcccceEEE-eeccCCccceecccccc----cceEHhHhChhhcCCCCHHHH--HHHHHHHHHHHHHH
Confidence            999999999999999999996 79999999999999999    99999887542       346  68999999999999


Q ss_pred             HHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       236 ~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                      ++.||||+|..+. +.++++. +|.+| .++++|+|+..+|.||+..|+|+|+||++ ++|+..++. .+|+++|.++|+
T Consensus       242 iklKGyTswaIgl-sva~l~~-ail~n-~~~i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~-~~Lt~~E~akL~  317 (332)
T KOG1495|consen  242 IKLKGYTSWAIGL-SVADLAQ-AILRN-LRRIHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVK-QKLTDEEVAKLK  317 (332)
T ss_pred             HHhcCchHHHHHH-HHHHHHH-HHHhC-cCceeeeeeccccccCCCCceEEecceeecCCchhhhhc-ccCCHHHHHHHH
Confidence            9999999997754 7888654 58888 99999999999999999889999999997 999999998 999999999999


Q ss_pred             HHHHHHHHHHH
Q 020022          315 LTAEELSEEKA  325 (332)
Q Consensus       315 ~s~~~i~~~~~  325 (332)
                      +||+.|.+.+.
T Consensus       318 kSa~tl~~~q~  328 (332)
T KOG1495|consen  318 KSAKTLLEAQK  328 (332)
T ss_pred             HHHHHHHHHHH
Confidence            99999987654

>cd05295 MDH_like Malate dehydrogenase-like

Probab=100.00  E-value=1.3e-66  Score=495.23  Aligned_cols=320  Identities=33%  Similarity=0.588  Sum_probs=286.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .|.+|+|+||+|.+|+++.+.|+.+.+||+++++.|+|+|+++++++++|.++||+|+++++..++.++++.+++++|||
T Consensus       122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~~daD  201 (452)
T cd05295         122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAFKDAH  201 (452)
T ss_pred             CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHhCCCC
Confidence            46899999999999999999999999999999999999999656789999999999999877767788888999999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCC-CeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP-NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~-~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~  162 (332)
                      +||++||.|+++|++|.|++..|+++++++++.|.+++++ ++++|++|||+|++|++++++++++|+++|.|.+.+|++
T Consensus       202 vvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~k~apgiP~~rVig~gtlds~  281 (452)
T cd05295         202 VIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAVARLQEN  281 (452)
T ss_pred             EEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEecchHHH
Confidence            9999999999999999999999999999999999999963 466777789999999999999779999998776668899


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCC--------CcchhhhhhhcccchhHHHHHHHhhHHH
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG--------EKPVRELVKDDAWLNGEFITTVQQRGAA  234 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~--------g~~~~~~~~~~~~~~~~~~~~v~~~~~~  234 (332)
                      |++++||+++|+++++|+..+||||||++|||+||+++|+++++        ++|+.+++.++.|..+++.+.+++++. 
T Consensus       282 R~r~~LA~kl~V~~~~V~~~~VwGeHG~sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~~~~v~~rg~-  360 (452)
T cd05295         282 RAKALLARKLNVNSAGIKDVIVWGNIGGNTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEFVATLKSLSS-  360 (452)
T ss_pred             HHHHHHHHHhCcCHHHceeeEEEEccCCceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHHHHHHHHHHH-
Confidence            99999999999999999877789999999999999999932210        299999887767877889999999887 


Q ss_pred             HHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          235 IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       235 i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                        ++|| ++++++|.++++++++|+.+.|+++++|+||+++|+||+|+|++||+||++ ++|++.+.+ ++|+++|+++|
T Consensus       361 --~rkg-sT~~siA~A~~~iv~ail~~t~~~~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~~-L~L~e~E~~kL  436 (452)
T cd05295         361 --SLNH-EAAISPAHAIATTLSYWYHGSPPGEIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVTD-LELSEILREVL  436 (452)
T ss_pred             --hccC-ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEeC-CCCCHHHHHHH
Confidence              5666 455666789999999877664458999999999999999999999999997 889888887 99999999999


Q ss_pred             HHHHHHHHHHHHHHh
Q 020022          314 DLTAEELSEEKALAY  328 (332)
Q Consensus       314 ~~s~~~i~~~~~~~~  328 (332)
                      ++|+++|.++.+.+.
T Consensus       437 ~~S~~eL~~E~~~~~  451 (452)
T cd05295         437 KRITSDLIQEKLVAL  451 (452)
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999999998763

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00135 malate dehydrogenase

Probab=100.00  E-value=4.7e-66  Score=474.92  Aligned_cols=305  Identities=87%  Similarity=1.283  Sum_probs=270.8

Q ss_pred             HHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHH
Q 020022           25 IARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMS  104 (332)
Q Consensus        25 l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~  104 (332)
                      |+.+.+||.++++.++|+|+++++++++|+++||.|++.+....++.+++++++++|||+||++||.++++|++|.+++.
T Consensus         2 ~~~g~~~g~~~~~~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~   81 (309)
T PLN00135          2 IARGVMLGPDQPVILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKGVNIAVMVGGFPRKEGMERKDVMS   81 (309)
T ss_pred             cccccccCCCCeEEEEEecCcccccchhhHHHHHHhhhHHhcCCcEecCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHH
Confidence            34566778777889999999976689999999999998655556666667799999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHHHHHHHHHHHcCCCCCCeeeeE
Q 020022          105 KNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDVKNVI  183 (332)
Q Consensus       105 ~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r~~~~la~~l~v~~~~v~~~~  183 (332)
                      .|+++++++++.|.+++.|++++|++|||+|+||+++++. +++|+++ |++||.||++||++++|+++++++++|+..+
T Consensus        82 ~N~~I~~~i~~~i~~~~~p~aivivvsNPvDv~t~~~~~~-sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~  160 (309)
T PLN00135         82 KNVSIYKSQASALEKHAAPDCKVLVVANPANTNALILKEF-APSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVI  160 (309)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEEeCCcHHHHHHHHHHH-cCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeE
Confidence            9999999999999996336899999999999999999998 6888876 8999999999999999999999999995444


Q ss_pred             EEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccchHHHHHHHHHHHHHHHcC-C
Q 020022          184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLG-T  262 (332)
Q Consensus       184 v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~~~~a~~~~~~i~~~i~~-~  262 (332)
                      ||||||+++||+||+++|+.+++|+|+.+++.++.|+.+++.+++++++++|+++|++++++++|.++++++++++.+ |
T Consensus       161 VlGeHG~s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~kg~t~~~ia~a~~~iv~ai~~~~~  240 (309)
T PLN00135        161 IWGNHSSTQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTP  240 (309)
T ss_pred             EEEcCCCceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHhCCc
Confidence            699999999999999999989999999998765557678999999999999999843345556677899988876654 5


Q ss_pred             CCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 020022          263 PEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCLS  332 (332)
Q Consensus       263 ~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~~~~~  332 (332)
                       +++++|+|++++|+||+|+|+|||+||++ ++|++.+++ ++|+++|+++|++|++.|+++.+.+.++|+
T Consensus       241 -~~~v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~-l~L~~~E~~~l~~S~~~lk~~~~~~~~~~~  309 (309)
T PLN00135        241 -EGTWVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQG-LSIDEFSRKKMDATAKELKEEKELAYSCLS  309 (309)
T ss_pred             -CCeEEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence             79999999999999999889999999997 888888887 999999999999999999999999998885

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=100.00  E-value=3.8e-65  Score=472.88  Aligned_cols=306  Identities=24%  Similarity=0.357  Sum_probs=274.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      |++..+||+||| +|.||+++++.|+..++++     ||+|+|+++  ++++|+++||+|+.... .++.++++.+++++
T Consensus         2 ~~~~~~ki~iiG-aG~vG~~~a~~l~~~~~~~-----el~L~D~~~--~~~~g~~~Dl~~~~~~~-~~~~i~~~~~~~~~   72 (315)
T PRK00066          2 MKKQHNKVVLVG-DGAVGSSYAYALVNQGIAD-----ELVIIDINK--EKAEGDAMDLSHAVPFT-SPTKIYAGDYSDCK   72 (315)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCC--chhHHHHHHHHhhcccc-CCeEEEeCCHHHhC
Confidence            555678999999 5999999999999988876     899999984  78899999999987432 45666677889999


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechH
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRL  159 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~l  159 (332)
                      |||+||++||.|+++|++|.+++..|+++++++++.+++++ |++++|++|||+|+++++++++ +|+|++|+ +.+|.|
T Consensus        73 ~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~-~~~~vivvsNP~d~~~~~~~k~-sg~p~~~viG~gt~L  150 (315)
T PRK00066         73 DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASG-FDGIFLVASNPVDILTYATWKL-SGFPKERVIGSGTSL  150 (315)
T ss_pred             CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCcHHHHHHHHHHH-hCCCHHHEeecCchH
Confidence            99999999999999999999999999999999999999999 5799999999999999999998 69999985 778999


Q ss_pred             HHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc----hhHHHHHHHhhHHHH
Q 020022          160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL----NGEFITTVQQRGAAI  235 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~----~~~~~~~v~~~~~~i  235 (332)
                      |+.|+++++|+++|+++++|+++ ||||||++++|+||++++    +|.|+.+++.+..|.    .+++.++++++++++
T Consensus       151 Ds~R~~~~la~~l~v~~~~V~~~-viGeHG~s~v~~~S~~~v----~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~i  225 (315)
T PRK00066        151 DSARFRYMLSEKLDVDPRSVHAY-IIGEHGDTEFPVWSHANV----AGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEI  225 (315)
T ss_pred             HHHHHHHHHHHHhCCCcccEEEE-EEecCCCcceecceeceE----CCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999988 589999999999999999    999999987654443    247889999999999


Q ss_pred             HHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       236 ~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                      ++.||+++|. +|.++++++.+ +.+| ++.++|+|++++|+|| ++|+|||+||++ ++|++++++ ++|+++|+++|+
T Consensus       226 i~~kg~t~~~-~a~~~~~i~~a-il~~-~~~v~~~sv~~~g~yg-~~~v~~S~Pv~ig~~Gv~~i~~-l~L~~~E~~~L~  300 (315)
T PRK00066        226 IEKKGATYYG-IAMALARITKA-ILNN-ENAVLPVSAYLEGQYG-EEDVYIGVPAVVNRNGIREIVE-LPLNDDEKQKFA  300 (315)
T ss_pred             HhcCCeehHH-HHHHHHHHHHH-HHcC-CCeEEEEEEEeccccC-CCCEEEEeEEEEeCCcEEEEcC-CCCCHHHHHHHH
Confidence            9999988865 45688887766 6667 8999999999999999 589999999997 999999997 999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 020022          315 LTAEELSEEKALA  327 (332)
Q Consensus       315 ~s~~~i~~~~~~~  327 (332)
                      +|+++|++.++..
T Consensus       301 ~s~~~l~~~~~~~  313 (315)
T PRK00066        301 HSADVLKEIMDEA  313 (315)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998753

>PLN02602 lactate dehydrogenase

Probab=100.00  E-value=3.7e-65  Score=476.58  Aligned_cols=301  Identities=22%  Similarity=0.352  Sum_probs=267.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~~~al~~aDi   84 (332)
                      +||+||| +|.||+++++.|+..++++     |++|+|+++  ++++|+++||+|++..... ..++ ++.+++++|||+
T Consensus        38 ~KI~IIG-aG~VG~~~a~~l~~~~l~~-----el~LiDi~~--~~~~g~a~DL~~~~~~~~~-~~i~~~~dy~~~~daDi  108 (350)
T PLN02602         38 TKVSVVG-VGNVGMAIAQTILTQDLAD-----ELALVDVNP--DKLRGEMLDLQHAAAFLPR-TKILASTDYAVTAGSDL  108 (350)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCC-----EEEEEeCCC--chhhHHHHHHHhhhhcCCC-CEEEeCCCHHHhCCCCE
Confidence            6999999 5999999999999988876     999999984  7889999999998743222 3443 245788999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHHH
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNR  163 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r  163 (332)
                      ||++||.++++|++|.|++.+|+++++++++.|+++| |++++|++|||+|++|++++++ +|+|++|+ +.+|.||++|
T Consensus       109 VVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~-p~~ivivvtNPvdv~t~~~~k~-sg~p~~rviG~gt~LDs~R  186 (350)
T PLN02602        109 CIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYS-PDTILLIVSNPVDVLTYVAWKL-SGFPANRVIGSGTNLDSSR  186 (350)
T ss_pred             EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCchHHHHHHHHHH-hCCCHHHEEeecchHHHHH
Confidence            9999999999999999999999999999999999999 5799999999999999999998 58999995 6678999999


Q ss_pred             HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhc------ccchhHHHHHHHhhHHHHHH
Q 020022          164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD------AWLNGEFITTVQQRGAAIIK  237 (332)
Q Consensus       164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~------~~~~~~~~~~v~~~~~~i~~  237 (332)
                      +++++|+++|+++++|+++ ||||||+++||+||++++    +|.|+.+++...      .| .+++.+++++++++|++
T Consensus       187 ~r~~lA~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~i----~G~pl~~~~~~~~~~~~~~~-~~~i~~~v~~~g~eIi~  260 (350)
T PLN02602        187 FRFLIADHLDVNAQDVQAY-IVGEHGDSSVALWSSVSV----GGVPVLSFLEKQQIAYEKET-LEEIHRAVVDSAYEVIK  260 (350)
T ss_pred             HHHHHHHHhCCCccceeee-EEecCCCceEeeeeeeeE----CCEEHHHHhhccCCccCHHH-HHHHHHHHHHHHHHHHh
Confidence            9999999999999999988 589999999999999999    999999886431      12 35799999999999999


Q ss_pred             hcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCC-CceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHH
Q 020022          238 ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVP-AGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDL  315 (332)
Q Consensus       238 ~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~-~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~  315 (332)
                      .||+|+|.. |.++++++.+ ++.| +++++|+|++++|+||+| +++|+|+||++ ++|++++++ ++|+++|+++|++
T Consensus       261 ~KG~t~~gi-a~a~a~ii~a-il~d-~~~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~~-l~L~~~E~~~l~~  336 (350)
T PLN02602        261 LKGYTSWAI-GYSVASLVRS-LLRD-QRRIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVVN-VHLTDEEAERLRK  336 (350)
T ss_pred             cCCccHHHH-HHHHHHHHHH-HHhc-CCCeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEec-CCCCHHHHHHHHH
Confidence            999877654 5578887765 6777 899999999999999994 89999999997 999999998 9999999999999


Q ss_pred             HHHHHHHHHHHH
Q 020022          316 TAEELSEEKALA  327 (332)
Q Consensus       316 s~~~i~~~~~~~  327 (332)
                      |++.|++.++.+
T Consensus       337 sa~~l~~~~~~~  348 (350)
T PLN02602        337 SAKTLWEVQSQL  348 (350)
T ss_pred             HHHHHHHHHHHh
Confidence            999999887654

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=100.00  E-value=1.7e-65  Score=471.68  Aligned_cols=293  Identities=23%  Similarity=0.339  Sum_probs=266.2

Q ss_pred             EEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEEeC
Q 020022           10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVG   89 (332)
Q Consensus        10 IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~~a   89 (332)
                      ||| +|+||+++++.|+..++++     ||+|+|+++  ++++|+++||+|+..+...+++++.+.+++++|||+||++|
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~-----el~L~Di~~--~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVita   72 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIAD-----EIVLIDINK--DKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVITA   72 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCC-----EEEEEeCCC--ChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEECC
Confidence            689 6999999999999998876     999999984  78899999999998766566677778899999999999999


Q ss_pred             CCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHHHHHHHH
Q 020022           90 GFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRALGQI  168 (332)
Q Consensus        90 g~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r~~~~l  168 (332)
                      |.|+++|++|.|++..|+++++++++.|++++ |++++|++|||+|++|++++++ +++|++| |+.+|.||++|+++++
T Consensus        73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~~~-sg~p~~~viG~gt~LDs~R~~~~l  150 (299)
T TIGR01771        73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSG-FDGIFLVATNPVDILTYVAWKL-SGFPKNRVIGSGTVLDTARLRYLL  150 (299)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHH-hCCCHHHEEeccchHHHHHHHHHH
Confidence            99999999999999999999999999999998 6799999999999999999998 6999998 5778999999999999


Q ss_pred             HHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh----cccchhHHHHHHHhhHHHHHHhcCccch
Q 020022          169 SEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQQRGAAIIKARKLSSA  244 (332)
Q Consensus       169 a~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~----~~~~~~~~~~~v~~~~~~i~~~kg~~~~  244 (332)
                      |+++++++++|+++ ||||||++|||+||+++|    +|+|+.+++.+    ..|..+++.+++++++++|++.||+++|
T Consensus       151 a~~l~v~~~~V~~~-v~GeHG~s~vp~~S~~~v----~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~kG~t~~  225 (299)
T TIGR01771       151 AEKLGVDPQSVHAY-IIGEHGDSEVPVWSSATI----GGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRKGATYY  225 (299)
T ss_pred             HHHhCcCcCeEEEE-EEecCCCceeeceeeeEE----CCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhcCCeeeH
Confidence            99999999999987 599999999999999999    99999988754    1333568999999999999999998887


Q ss_pred             HHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHH
Q 020022          245 LSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSE  322 (332)
Q Consensus       245 ~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~  322 (332)
                      .+ |.++++++.+ |+.| +++++|+|++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|++.|++
T Consensus       226 ~~-a~a~~~~i~a-il~d-~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~ik~  299 (299)
T TIGR01771       226 GI-GMAVARIVEA-ILHD-ENRVLPVSAYLDGEYGI-KDVYIGVPAVLGRNGVEEIIE-LPLSDEEKEAFQKSAETLKK  299 (299)
T ss_pred             HH-HHHHHHHHHH-HHcC-CCcEEEEEEEecccCCC-CCEEEEEEEEEeCCeeEEEcc-CCCCHHHHHHHHHHHHHHhC
Confidence            65 5589998776 5566 89999999999999998 69999999997 999999998 99999999999999999873

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=1e-64  Score=468.75  Aligned_cols=302  Identities=25%  Similarity=0.319  Sum_probs=268.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-cceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~~~~~~~~~~~al~~a   82 (332)
                      +.+||+||| +|+||+++++.|+..++.+     ||+|+|+++  ++++|+++||+|+..... ..+..+ +.+++++||
T Consensus         2 ~~~Ki~IiG-aG~VG~~~a~~l~~~~~~~-----el~LiD~~~--~~~~g~a~Dl~~~~~~~~~~~v~~~-~dy~~~~~a   72 (312)
T cd05293           2 PRNKVTVVG-VGQVGMACAISILAKGLAD-----ELVLVDVVE--DKLKGEAMDLQHGSAFLKNPKIEAD-KDYSVTANS   72 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--cHHHHHHHHHHHhhccCCCCEEEEC-CCHHHhCCC
Confidence            346999999 5999999999999988766     999999985  688999999999873222 344433 457789999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDH  161 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds  161 (332)
                      |+||+++|.++++|++|.+++.+|+++++++++.|++++ |++++|++|||+|+++++++++ +|+|++| |+.||.||+
T Consensus        73 divvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~k~-sg~p~~~viG~gt~Ld~  150 (312)
T cd05293          73 KVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYS-PNAILLVVSNPVDIMTYVAWKL-SGLPKHRVIGSGCNLDS  150 (312)
T ss_pred             CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEccChHHHHHHHHHHH-hCCCHHHEEecCchHHH
Confidence            999999999999999999999999999999999999999 5799999999999999999998 6999999 566799999


Q ss_pred             HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh-----cccchhHHHHHHHhhHHHHH
Q 020022          162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD-----DAWLNGEFITTVQQRGAAII  236 (332)
Q Consensus       162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~-----~~~~~~~~~~~v~~~~~~i~  236 (332)
                      +|+++++|+++++++++|++++ |||||+++||+||++++    +|+|+.+++..     +....+++.+++++++++|+
T Consensus       151 ~R~~~~la~~l~v~~~~v~~~v-~GeHG~s~vp~~S~~~i----~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii  225 (312)
T cd05293         151 ARFRYLIAERLGVAPSSVHGWI-IGEHGDSSVPVWSGVNV----AGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVI  225 (312)
T ss_pred             HHHHHHHHHHhCCChhhEEEEE-eecCCCCccccceeceE----CCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999885 89999999999999999    99999988632     11113689999999999999


Q ss_pred             HhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHH
Q 020022          237 KARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDL  315 (332)
Q Consensus       237 ~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~  315 (332)
                      +.||+++|.+ |.++++++.+ |.+| ++.++|+|++++|+||+|.|++||+||++ ++|++++++ ++|+++|+++|++
T Consensus       226 ~~kg~t~~~~-a~a~~~ii~a-il~d-~~~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~-l~L~~~E~~~l~~  301 (312)
T cd05293         226 KLKGYTSWAI-GLSVADLVDA-ILRN-TGRVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIK-QPLTEEEQEKLQK  301 (312)
T ss_pred             HhcCCchHHH-HHHHHHHHHH-HHcC-CCeEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEec-CCCCHHHHHHHHH
Confidence            9999777665 5689997776 5566 89999999999999999999999999997 999999998 9999999999999


Q ss_pred             HHHHHHHHHH
Q 020022          316 TAEELSEEKA  325 (332)
Q Consensus       316 s~~~i~~~~~  325 (332)
                      |++.|++.++
T Consensus       302 s~~~i~~~~~  311 (312)
T cd05293         302 SADTLWEVQK  311 (312)
T ss_pred             HHHHHHHHhh
Confidence            9999998765

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01756 LDH_protist lactate dehydrogenase

Probab=100.00  E-value=1.9e-64  Score=465.55  Aligned_cols=304  Identities=37%  Similarity=0.639  Sum_probs=267.8

Q ss_pred             HHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHH
Q 020022           23 PMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDV  102 (332)
Q Consensus        23 ~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~  102 (332)
                      +.|+.+++|| ++++.++|+|+++++++++|+++||.|+.++.......+++.+++++|||+||++||.|+++|++|.++
T Consensus         3 ~~~~~g~~~g-~~~~~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~dl   81 (313)
T TIGR01756         3 HWIANGDLYG-NRPVCLHLLEIPPALNRLEALAMELEDCAFPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRADL   81 (313)
T ss_pred             ceeccCcccC-CCeEEEEEecCCCccchhHhHHHHHHHhccccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHHHH
Confidence            4567778888 788899999999777899999999999984433333445666689999999999999999999999999


Q ss_pred             HHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH-HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeee
Q 020022          103 MSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK-EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN  181 (332)
Q Consensus       103 ~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~-~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~  181 (332)
                      +..|+++++++++.|.+++||++++|++|||+|+||++++ +. +|+|++.|++||.||++||+++||++++++|++|++
T Consensus        82 l~~N~~I~~~i~~~i~~~a~~~~ivivvtNPvDv~t~v~~~~~-sg~p~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~  160 (313)
T TIGR01756        82 LTKNTPIFKATGEALSEYAKPTVKVLVIGNPVNTNCLVAMLHA-PKLSAENFSSLCMLDHNRAVSRIASKLKVPVDHIYH  160 (313)
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCeEEEEeCCchHHHHHHHHHHc-CCCCHHHEEecccHHHHHHHHHHHHHhCcChhheee
Confidence            9999999999999999999877889999999999999995 65 899988889999999999999999999999999988


Q ss_pred             eEEEeccCCceeecCCceeEecCCCCcchhhh--hhhcccchhHHHHHHHhhHHHHHHhcCccchHHHHHHHHHHHHHHH
Q 020022          182 VIIWGNHSSSQYPDVNHATVNTAAGEKPVREL--VKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWV  259 (332)
Q Consensus       182 ~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~--~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~~~~a~~~~~~i~~~i  259 (332)
                      ++||||||++|||+||+++|+.  +|.|+..+  +. +.|..+++.+++++++++|+++||+|+|.++|.++++++++++
T Consensus       161 ~~V~GeHG~s~vp~~S~~~V~~--~G~~~~~~~~~~-~~~~~~~i~~~v~~~g~~Ii~~kg~t~~~~~a~ai~~iv~ail  237 (313)
T TIGR01756       161 VVVWGNHAESMVADLTHAEFTK--NGKHQKVFDELC-RDYPEPDFFEVIAQRAWKILEMRGFTSAASPVKASLQHMKAWL  237 (313)
T ss_pred             eEEEECCCCceeecccccEEec--CCeehhHhhhcC-cHhHHHHHHHHHHHHHHHHHhCcCCcchHHHHHHHHHHHHHHh
Confidence            8779999999999999999964  78886544  32 2466689999999999999999999888877668999888766


Q ss_pred             cCCCCceEEEeeeecC--CCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 020022          260 LGTPEGTWVSMGVYSD--GSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCL  331 (332)
Q Consensus       260 ~~~~~~~i~~~sv~~~--g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~~~~  331 (332)
                      .+.++++++|+|++++  |+||+|+|+++|+||++ ++|+++++++++|+++|+++|++|++.|+++.+.+...|
T Consensus       238 ~~~~~~~i~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l~L~~~E~~~l~~Sa~~l~~e~~~~~~~~  312 (313)
T TIGR01756       238 FGTRPGEVLSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENFELNPWLKTKLAQTEKDLFEERETALKAL  312 (313)
T ss_pred             cCCCCCeEEEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            5323789999999985  39999889999999997 999999997789999999999999999999999987755

This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=100.00  E-value=4.3e-63  Score=459.23  Aligned_cols=300  Identities=25%  Similarity=0.405  Sum_probs=269.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+||| +|.+|+++++.|+..++..     +|.|+|+++  +++++.++||+|..........+..+.++++++||+|
T Consensus         1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~-----ei~l~D~~~--~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIG-AGHVGSSFAYSLVNQGIAD-----ELVLIDINE--EKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIV   72 (306)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--chhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEE
Confidence            4899999 6999999999999888655     899999985  6789999999998754444445555667889999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHHHH
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRA  164 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r~  164 (332)
                      |+++|.++++|++|.+++.+|+++++++++.|++++ |++++|++|||+|++|++++++ +|+|++| |+.+|.||++|+
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~-~~~~vivvsNP~d~~~~~~~~~-~g~p~~~v~g~gt~LDs~R~  150 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASG-FDGIFLVASNPVDVITYVVQKL-SGLPKNRVIGTGTSLDTARL  150 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecChHHHHHHHHHHH-hCcCHHHEeeccchHHHHHH
Confidence            999999999999999999999999999999999999 5899999999999999999998 8999999 677899999999


Q ss_pred             HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc---hhHHHHHHHhhHHHHHHhcCc
Q 020022          165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL---NGEFITTVQQRGAAIIKARKL  241 (332)
Q Consensus       165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~---~~~~~~~v~~~~~~i~~~kg~  241 (332)
                      ++++|+++++++++|+++ |||+||+++||+||++++    +|.|+.+++.+..|.   .+++.+++++++++|++.||+
T Consensus       151 ~~~la~~l~v~~~~v~~~-V~G~Hg~s~~~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~kg~  225 (306)
T cd05291         151 RRALAEKLNVDPRSVHAY-VLGEHGDSQFVAWSTVTV----GGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIINGKGA  225 (306)
T ss_pred             HHHHHHHHCCCcccceEE-EEecCCCceeecceeeEE----cCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHHccCc
Confidence            999999999999999986 699999999999999999    999999987654453   467889999999999999998


Q ss_pred             cchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHH
Q 020022          242 SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEEL  320 (332)
Q Consensus       242 ~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  320 (332)
                      ++|.+ |.++++++.+ |..| +++++|+|++++|+|| ++|+|||+||++ ++|++++++ ++|+++|+++|++|+++|
T Consensus       226 t~~~~-a~a~~~~~~a-il~~-~~~v~~~s~~~~g~yg-~~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E~~~l~~s~~~l  300 (306)
T cd05291         226 TYYGI-ATALARIVKA-ILND-ENAILPVSAYLDGEYG-EKDVYIGVPAIIGRNGVEEVIE-LDLTEEEQEKFEKSADII  300 (306)
T ss_pred             cHHHH-HHHHHHHHHH-HHcC-CCEEEEEEEEeccccC-CCCEEEEEEEEEeCCCEEEEEC-CCCCHHHHHHHHHHHHHH
Confidence            77665 4588998776 5566 8999999999999999 489999999997 999999998 999999999999999999


Q ss_pred             HHHHH
Q 020022          321 SEEKA  325 (332)
Q Consensus       321 ~~~~~  325 (332)
                      ++.++
T Consensus       301 ~~~~~  305 (306)
T cd05291         301 KENIK  305 (306)
T ss_pred             HHHhh
Confidence            98865

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=100.00  E-value=1.5e-62  Score=453.72  Aligned_cols=296  Identities=25%  Similarity=0.373  Sum_probs=267.1

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-cceEeeCChhhhcCCCcEEE
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGVNIAV   86 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~~~~~~~~~~~al~~aDiVi   86 (332)
                      |+||| +|.||+++++.|+..++++     ||+|+|+++  ++++++++||+|+..+.. .++..+ +.++++++||+||
T Consensus         1 i~iiG-aG~VG~~~a~~l~~~~~~~-----el~l~D~~~--~~~~g~~~DL~~~~~~~~~~~i~~~-~~~~~l~~aDiVI   71 (300)
T cd00300           1 ITIIG-AGNVGAAVAFALIAKGLAS-----ELVLVDVNE--EKAKGDALDLSHASAFLATGTIVRG-GDYADAADADIVV   71 (300)
T ss_pred             CEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--cHHHHHHHhHHHhccccCCCeEEEC-CCHHHhCCCCEEE
Confidence            68999 6999999999999988876     899999984  788999999999876532 233333 4478999999999


Q ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHHHHH
Q 020022           87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRAL  165 (332)
Q Consensus        87 ~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r~~  165 (332)
                      +++|.|++++++|.+++.+|+++++++++.|+++| |++++|++|||+|+++++++++ +|+|++|+ +.+|.+||.|++
T Consensus        72 itag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~-p~~~viv~sNP~d~~~~~~~~~-sg~~~~kviG~gt~lDs~r~~  149 (300)
T cd00300          72 ITAGAPRKPGETRLDLINRNAPILRSVITNLKKYG-PDAIILVVSNPVDILTYVAQKL-SGLPKNRVIGSGTLLDSARFR  149 (300)
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccChHHHHHHHHHHH-hCcCHHHEEecCCcHHHHHHH
Confidence            99999999999999999999999999999999999 6899999999999999999998 68999995 556999999999


Q ss_pred             HHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccchH
Q 020022          166 GQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSAL  245 (332)
Q Consensus       166 ~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~~  245 (332)
                      +++|+++++++++|++++ +||||+++||+||++++    +|.|+.+++++++|..+++.+++++++++|++.||+++|.
T Consensus       150 ~~la~~l~v~~~~v~~~v-iGeHg~s~v~~~S~~~v----~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~~kg~t~~~  224 (300)
T cd00300         150 SLLAEKLDVDPQSVHAYV-LGEHGDSQVVAWSTATV----GGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRLKGATNYG  224 (300)
T ss_pred             HHHHHHhCCCcccEEEEE-EeccCCceeeeeeeeEE----CCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHccCcchHH
Confidence            999999999999999885 79999999999999999    9999999887666777899999999999999999987764


Q ss_pred             HHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 020022          246 SAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK  324 (332)
Q Consensus       246 ~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~  324 (332)
                       +|.++++++.+ +.+| +++++|+|++++|+|| ++++|||+||++ ++|++++++ ++|+++|+++|++|++.|++.+
T Consensus       225 -~a~a~~~~~~a-i~~~-~~~v~~~s~~~~g~yg-~~~~~~s~Pv~ig~~Gi~~i~~-l~L~~~E~~~l~~s~~~l~~~~  299 (300)
T cd00300         225 -IATAIADIVKS-ILLD-ERRVLPVSAVQEGQYG-IEDVALSVPAVVGREGVVRILE-IPLTEDEEAKLQKSAEALKEVL  299 (300)
T ss_pred             -HHHHHHHHHHH-HHcC-CCeEEEEEEEecCccC-CCCEEEEEEEEEeCCCeEEEec-CCCCHHHHHHHHHHHHHHHHHh
Confidence             56789998876 5556 8999999999999999 489999999997 999999997 9999999999999999999765

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=6.7e-62  Score=415.35  Aligned_cols=330  Identities=75%  Similarity=1.188  Sum_probs=318.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      .++.+|.|+||+|.+|+++++.++.+-++++++++.++|+|+.+....|+|..|+|+|+++|+...+..+++..++++|.
T Consensus         2 ~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvattd~~~afkdv   81 (332)
T KOG1496|consen    2 KEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATTDEVEAFKDV   81 (332)
T ss_pred             CCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhcccChhhhhccC
Confidence            45789999999999999999999999999999999999999998778899999999999999999999999999999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN  162 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~  162 (332)
                      |+.|..++.||++|++|.|++..|++|++.-+..+++|+.|+++|+++.||++..+.++.++++.+|.++|...|.||..
T Consensus        82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~k~ApsIP~kNfs~lTRLDhN  161 (332)
T KOG1496|consen   82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILKKFAPSIPEKNFSALTRLDHN  161 (332)
T ss_pred             cEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHhhhCCCCchhcchhhhhhchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS  242 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~  242 (332)
                      |...++|.++|+..++|.+++|||+|+.+|+|+..+++|+...+.+|+.+.+.+..|+..+|.+.|+++|..+++.++.+
T Consensus       162 RA~~QlA~klgv~~~~VkNviIWGNHSsTQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~ark~S  241 (332)
T KOG1496|consen  162 RALAQLALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIKARKLS  241 (332)
T ss_pred             hHHHHHHHhhCCchhhcceeEEecccccccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhhhhhhh
Confidence            99999999999999999999999999999999999999966556789999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEecCCcEEEecCCCCCHHHHHHHHHHHHHHHH
Q 020022          243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSE  322 (332)
Q Consensus       243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~  322 (332)
                      +.+++|.++++.|++|+.+.|++++++++|+++|.||+|.|..||+||+.++|-|+++++++++++-++++..++++|.+
T Consensus       242 SA~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDGsYgip~gli~SfPv~~k~g~wkiVqgl~iddf~r~km~~t~~EL~e  321 (332)
T KOG1496|consen  242 SAMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDGSYGIPDGLIFSFPVTIKNGDWKIVQGLPIDDFSREKMDLTAKELKE  321 (332)
T ss_pred             hhhhHHHhHhhhhhheecCCCCccEEEEeeecCCCCCCCCCeEEEcceEecCCceEEEcCcchhHHHHHhhhhhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhC
Q 020022          323 EKALAYSCLS  332 (332)
Q Consensus       323 ~~~~~~~~~~  332 (332)
                      +.+.+++||+
T Consensus       322 Ekd~a~~~l~  331 (332)
T KOG1496|consen  322 EKDLAYSCLS  331 (332)
T ss_pred             hHHHHHHhhc
Confidence            9999999985

>PTZ00117 malate dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-60  Score=443.71  Aligned_cols=305  Identities=25%  Similarity=0.375  Sum_probs=266.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCcc--ceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~--~~~~~~~~~~al~~   81 (332)
                      +.+||+||| +|+||+++++.++..++ .     +|+|+|+++  +++++.++|+.|.......  +++.+ +.+++++|
T Consensus         4 ~~~KI~IIG-aG~vG~~ia~~l~~~~~-~-----~l~L~Di~~--~~~~g~~lDl~~~~~~~~~~~~i~~~-~d~~~l~~   73 (319)
T PTZ00117          4 KRKKISMIG-AGQIGSTVALLILQKNL-G-----DVVLYDVIK--GVPQGKALDLKHFSTLVGSNINILGT-NNYEDIKD   73 (319)
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHHCCC-C-----eEEEEECCC--ccchhHHHHHhhhccccCCCeEEEeC-CCHHHhCC
Confidence            457999999 59999999999998875 4     799999985  5678899999998643332  33433 45669999


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHH
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLD  160 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~ld  160 (332)
                      ||+||+++|.+++++++|.|++..|.++++++++.|+++| |++++|++|||+|+++++++++ +++|++|+ +.+|.+|
T Consensus        74 ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~-p~a~vivvsNP~di~t~~~~~~-s~~p~~rviG~gt~ld  151 (319)
T PTZ00117         74 SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC-PNAFVICVTNPLDCMVKVFQEK-SGIPSNKICGMAGVLD  151 (319)
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecChHHHHHHHHHHh-hCCCcccEEEecchHH
Confidence            9999999999999999999999999999999999999999 5799999999999999999998 69998885 5567999


Q ss_pred             HHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc---hhHHHHHHHhhHHHHHH
Q 020022          161 HNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL---NGEFITTVQQRGAAIIK  237 (332)
Q Consensus       161 s~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~---~~~~~~~v~~~~~~i~~  237 (332)
                      ++|+++++|++++++|++|++++ +||||+++||+||++++    +|+|+.+++.++.|.   .+++.+++++++++|++
T Consensus       152 s~R~~~~la~~l~v~~~~v~~~v-iGeHg~~~v~~~s~~~v----~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~  226 (319)
T PTZ00117        152 SSRFRCNLAEKLGVSPGDVSAVV-IGGHGDLMVPLPRYCTV----NGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVK  226 (319)
T ss_pred             HHHHHHHHHHHhCCCcccceEEE-eecCCCcEEeceeeceE----CCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999885 79999999999999999    999999987554343   35788899999999999


Q ss_pred             h--cCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          238 A--RKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       238 ~--kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                      .  ||++ ++++|.++++++.+ |.+| +++++|+|++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|+
T Consensus       227 ~~~kg~t-~~~~a~a~~~~~~a-il~~-~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-l~l~~~E~~~l~  301 (319)
T PTZ00117        227 LLKKGSA-FFAPAAAIVAMIEA-YLKD-EKRVLVCSVYLNGQYNC-KNLFVGVPVVIGGKGIEKVIE-LELNAEEKELFD  301 (319)
T ss_pred             hcCCCCh-HHHHHHHHHHHHHH-HhcC-CCeEEEEEEEeccccCC-CCeEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHH
Confidence            6  6644 45667789998776 5566 79999999999999999 49999999997 999999998 999999999999


Q ss_pred             HHHHHHHHHHHHHhhh
Q 020022          315 LTAEELSEEKALAYSC  330 (332)
Q Consensus       315 ~s~~~i~~~~~~~~~~  330 (332)
                      +|++.|++.++.+...
T Consensus       302 ~s~~~l~~~~~~~~~~  317 (319)
T PTZ00117        302 KSIESIQELTQKAKAL  317 (319)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999877654

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=6e-61  Score=442.09  Aligned_cols=296  Identities=24%  Similarity=0.335  Sum_probs=254.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC---ChhhhcCCCc
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT---DAVEACTGVN   83 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~---~~~~al~~aD   83 (332)
                      ||+||||+|+||+++++.|+..++.+     |++|+|+++    +.|+++||+|...  ..+++.++   +.+++++|||
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~-----elvL~Di~~----a~g~a~DL~~~~~--~~~i~~~~~~~~~~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVS-----ELSLYDIAG----AAGVAADLSHIPT--AASVKGFSGEEGLENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEecCCC----CcEEEchhhcCCc--CceEEEecCCCchHHHcCCCC
Confidence            79999966999999999999887765     899999984    6789999999762  23444422   3489999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc----hHHHHHHhCCCCCCCcEEEechH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT----NALILKEFAPSIPAKNITCLTRL  159 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~----~~~~~~~~~~~~~~~~i~~~t~l  159 (332)
                      +||+++|.+++++++|++++..|+++++++++.|.+++ |++++|++|||+|+    +|+++++. +|+|++|++|.|.|
T Consensus        70 ivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~-p~~iiivvsNPvDv~~~i~t~~~~~~-sg~p~~rViG~g~L  147 (312)
T TIGR01772        70 VVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESC-PKAMILVITNPVNSTVPIAAEVLKKK-GVYDPNKLFGVTTL  147 (312)
T ss_pred             EEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhC-CCeEEEEecCchhhHHHHHHHHHHHh-cCCChHHEEeeecc
Confidence            99999999999999999999999999999999999998 68999999999998    88889888 79999997666679


Q ss_pred             HHHHHHHHHHHHcCCCCCCeeeeEEEeccCC-ceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHh
Q 020022          160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA  238 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~-~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~  238 (332)
                      |++||++++|++++++|++|++++ |||||+ +|||+||++++    .  ++   +.++.  .+++.+++++++++|++.
T Consensus       148 DsaR~r~~la~~l~v~~~~v~~~V-iGeHg~~s~vp~~S~~~~----~--~~---~~~~~--~~~i~~~v~~~g~~Ii~~  215 (312)
T TIGR01772       148 DIVRANTFVAELKGKDPMEVNVPV-IGGHSGETIIPLISQCPG----K--VL---FTEDQ--LEALIHRIQNAGTEVVKA  215 (312)
T ss_pred             hHHHHHHHHHHHhCCCHHHeEEEE-EEecCCCccccccccccc----c--CC---CCHHH--HHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999774 899997 99999999986    2  22   22222  368999999999999997


Q ss_pred             c---CccchHHHHHHHHHHHHHHHc--CCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHHH
Q 020022          239 R---KLSSALSAASSACDHIRDWVL--GTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSRK  311 (332)
Q Consensus       239 k---g~~~~~~~a~~~~~~i~~~i~--~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~~  311 (332)
                      |   |+ +++++|.++++++.+.+.  .| ++.++|+ ++++|+||. +|+|+|+||++ ++|++++++ + +|+++|++
T Consensus       216 k~gkg~-t~~~ia~a~~~iv~ail~~~~d-~~~v~~~-s~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~  290 (312)
T TIGR01772       216 KAGAGS-ATLSMAFAGARFVLSLVRGLKG-EEGVVEC-AYVESDGVT-EATFFATPLLLGKNGVEKRLG-IGKLSSFEEK  290 (312)
T ss_pred             ccCCCC-hhHHHHHHHHHHHHHHHHhhCC-CccEEEE-EEEccCCCc-CceEEEEEEEEcCCeeEEEEc-cCCCCHHHHH
Confidence            4   54 445667788887665332  35 7899995 589999997 89999999997 999999998 8 89999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhC
Q 020022          312 KLDLTAEELSEEKALAYSCLS  332 (332)
Q Consensus       312 ~l~~s~~~i~~~~~~~~~~~~  332 (332)
                      +|++|++.|++.++.+++|.+
T Consensus       291 ~l~~S~~~i~~~~~~g~~~~~  311 (312)
T TIGR01772       291 MLNGALPELKKNIKKGEEFVA  311 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999874

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-60  Score=441.20  Aligned_cols=304  Identities=23%  Similarity=0.373  Sum_probs=264.1

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeCChhh
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVE   77 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~~~~~   77 (332)
                      |.| +.+||+||| +|.||+++++.++..++ .     +++|+|+++  +++++.++|+.|......  .++..++ .++
T Consensus         1 ~~~~~~~KI~IIG-aG~vG~~ia~~la~~gl-~-----~i~LvDi~~--~~~~~~~ld~~~~~~~~~~~~~I~~~~-d~~   70 (321)
T PTZ00082          1 MTMIKRRKISLIG-SGNIGGVMAYLIVLKNL-G-----DVVLFDIVK--NIPQGKALDISHSNVIAGSNSKVIGTN-NYE   70 (321)
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHhCCC-C-----eEEEEeCCC--chhhHHHHHHHhhhhccCCCeEEEECC-CHH
Confidence            555 457999999 69999999999988775 2     699999985  557888999999754332  3444434 468


Q ss_pred             hcCCCcEEEEeCCCCCCCCC-----CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc
Q 020022           78 ACTGVNIAVMVGGFPRKEGM-----ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN  152 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~~-----~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~  152 (332)
                      +++|||+||+++|.++++++     +|.+++..|+++++++++.|+++| |++++|++|||+|++++.++++ +++|++|
T Consensus        71 ~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~-p~a~~iv~sNP~di~t~~~~~~-sg~p~~r  148 (321)
T PTZ00082         71 DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC-PNAFVIVITNPLDVMVKLLQEH-SGLPKNK  148 (321)
T ss_pred             HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHh-cCCChhh
Confidence            99999999999999999999     999999999999999999999999 5789999999999999999998 7999888


Q ss_pred             E-EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhccc---chhHHHHHH
Q 020022          153 I-TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW---LNGEFITTV  228 (332)
Q Consensus       153 i-~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~---~~~~~~~~v  228 (332)
                      + +.+|.+|+.|+++++|+++++++++|++++ +||||+++||+||++++    +|.|+.++++.+.+   ..+++.+++
T Consensus       149 viGlgt~lds~R~~~~la~~l~v~~~~v~~~v-iGeHg~s~v~~~S~~~i----~g~~~~~~~~~~~~~~~~~~~i~~~~  223 (321)
T PTZ00082        149 VCGMAGVLDSSRLRTYIAEKLGVNPRDVHASV-IGAHGDKMVPLPRYVTV----GGIPLSEFIKKGLITQEEIDEIVERT  223 (321)
T ss_pred             EEEecCcccHHHHHHHHHHHhCCCcccceeeE-EecCCCceEecceeeEE----CCEEHHHhhhcccCCHHHHHHHHHHH
Confidence            5 566799999999999999999999999885 79999999999999999    99999988643211   136789999


Q ss_pred             HhhHHHHHHh--cCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCC
Q 020022          229 QQRGAAIIKA--RKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSI  305 (332)
Q Consensus       229 ~~~~~~i~~~--kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l  305 (332)
                      ++++++|++.  ||++. +++|.++++++.+ |+.| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|
T Consensus       224 ~~~g~~i~~~~gkg~t~-~~ia~a~~~i~~a-il~d-~~~v~~vs~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l  298 (321)
T PTZ00082        224 RNTGKEIVDLLGTGSAY-FAPAAAAIEMAEA-YLKD-KKRVLPCSAYLEGQYGH-KDIYMGTPAVIGANGVEKIIE-LDL  298 (321)
T ss_pred             HHHHHHHHhhcCCCccH-HHHHHHHHHHHHH-HHcC-CCcEEEEEEEecccCCC-CCeEEEEEEEEeCCeEEEEeC-CCC
Confidence            9999999996  45444 5667788997765 6667 89999999999999999 79999999987 999999998 999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHH
Q 020022          306 DEFSRKKLDLTAEELSEEKAL  326 (332)
Q Consensus       306 ~~~E~~~l~~s~~~i~~~~~~  326 (332)
                      +++|+++|++|++.|++.++.
T Consensus       299 ~~~E~~~l~~sa~~i~~~~~~  319 (321)
T PTZ00082        299 TPEEQKKFDESIKEVKRLEAL  319 (321)
T ss_pred             CHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999988764

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=100.00  E-value=1.9e-60  Score=437.95  Aligned_cols=295  Identities=24%  Similarity=0.355  Sum_probs=251.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee---CChhhhcCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT---TDAVEACTGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~---~~~~~al~~a   82 (332)
                      |||+||||+|+||+++++.|+..++.+     ||+|+|++    +++|+++||+|+..  ...++..   ++.+++++||
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~-----elvLiDi~----~a~g~alDL~~~~~--~~~i~~~~~~~~~y~~~~da   69 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIV----NTPGVAADLSHINT--PAKVTGYLGPEELKKALKGA   69 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEEecC----ccceeehHhHhCCC--cceEEEecCCCchHHhcCCC
Confidence            599999966999999999999888766     99999997    67999999999873  2344432   2348999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch----HHHHHHhCCCCCCCcEEEech
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN----ALILKEFAPSIPAKNITCLTR  158 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~----~~~~~~~~~~~~~~~i~~~t~  158 (332)
                      |+||++||.|+++|++|.|++..|+++++++++.|.+++ |++++|++|||+|+|    +++++++ +++|++|++|.|.
T Consensus        70 DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvDv~~~i~t~~~~~~-s~~p~~rviG~~~  147 (310)
T cd01337          70 DVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKAC-PKALILIISNPVNSTVPIAAEVLKKA-GVYDPKRLFGVTT  147 (310)
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchhhHHHHHHHHHHHh-cCCCHHHEEeeec
Confidence            999999999999999999999999999999999999998 589999999999997    8888887 7999999767678


Q ss_pred             HHHHHHHHHHHHHcCCCCCCeeeeEEEecc-CCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH
Q 020022          159 LDHNRALGQISEKLNVQVSDVKNVIIWGNH-SSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK  237 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v~~~~v~G~h-g~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~  237 (332)
                      |||+|+++++|+++|+++++|+++ ||||| |++|||+||++.+    .    .++ .++.  .+++.+++++++++|++
T Consensus       148 LDs~R~~~~la~~l~v~~~~V~~~-v~GeHsGds~vp~~S~~~~----~----~~~-~~~~--~~~i~~~v~~~g~~Ii~  215 (310)
T cd01337         148 LDVVRANTFVAELLGLDPAKVNVP-VIGGHSGVTILPLLSQCQP----P----FTF-DQEE--IEALTHRIQFGGDEVVK  215 (310)
T ss_pred             hHHHHHHHHHHHHhCcCHHHEEEE-EEecCCCCceecccccccc----c----ccC-CHHH--HHHHHHHHHHHHHHHHh
Confidence            999999999999999999999977 58999 8999999999987    2    111 2221  46899999999999999


Q ss_pred             hc---CccchHHHHHHHHHHHHHHHc--CCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHH
Q 020022          238 AR---KLSSALSAASSACDHIRDWVL--GTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSR  310 (332)
Q Consensus       238 ~k---g~~~~~~~a~~~~~~i~~~i~--~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~  310 (332)
                      .|   |+ +++++|.++++++.+++.  .+ ++.+++++ +.+|+ |. +|+|+|+||++ ++|++++++ + +|+++|+
T Consensus       216 ~k~gkg~-t~~~~a~a~~~iv~aIl~~~~~-~~~~~~~s-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~~-l~~L~~~E~  289 (310)
T cd01337         216 AKAGAGS-ATLSMAYAGARFANSLLRGLKG-EKGVIECA-YVESD-VT-EAPFFATPVELGKNGVEKNLG-LGKLNDYEK  289 (310)
T ss_pred             CccCCCC-cchhHHHHHHHHHHHHHHhcCC-CcceEEEE-EEecc-CC-CceEEEEEEEEeCCeEEEEeC-CCCCCHHHH
Confidence            85   54 445667789998876542  23 45677777 66665 75 79999999997 999999998 8 6999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhh
Q 020022          311 KKLDLTAEELSEEKALAYSCL  331 (332)
Q Consensus       311 ~~l~~s~~~i~~~~~~~~~~~  331 (332)
                      ++|++|++.|++.++...+|.
T Consensus       290 ~~l~~S~~~i~~~~~~g~~~~  310 (310)
T cd01337         290 KLLEAALPELKKNIEKGVDFV  310 (310)
T ss_pred             HHHHHHHHHHHHHHhhhcccC
Confidence            999999999999999988874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=5.1e-60  Score=438.41  Aligned_cols=300  Identities=23%  Similarity=0.343  Sum_probs=266.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.||+++++.|+..++..     +++|+|+++  +++++.++|+.|... ......+.++.++++++||+|
T Consensus         1 mkI~IIG-aG~VG~~~a~~l~~~g~~~-----ev~l~D~~~--~~~~g~a~dl~~~~~-~~~~~~i~~~d~~~l~~aDiV   71 (308)
T cd05292           1 MKVAIVG-AGFVGSTTAYALLLRGLAS-----EIVLVDINK--AKAEGEAMDLAHGTP-FVKPVRIYAGDYADCKGADVV   71 (308)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCC-----EEEEEECCc--hhhhhHHHHHHcccc-ccCCeEEeeCCHHHhCCCCEE
Confidence            4899999 6999999999999988655     899999984  677889999998753 222334445667899999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHHHH
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRA  164 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r~  164 (332)
                      |+++|.+++++++|.+++..|+++++++++.|++++ |+++++++|||+|+++++++++ +|+|++| |+.||.||++|+
T Consensus        72 iita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~-~~giiiv~tNP~d~~~~~~~~~-sg~p~~~viG~gt~LDs~R~  149 (308)
T cd05292          72 VITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYA-PDAILLVVTNPVDVLTYVAYKL-SGLPPNRVIGSGTVLDTARF  149 (308)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-HCcCHHHeecccchhhHHHH
Confidence            999999999999999999999999999999999999 5799999999999999999999 6999999 577899999999


Q ss_pred             HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhc--c---cchhHHHHHHHhhHHHHHHhc
Q 020022          165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD--A---WLNGEFITTVQQRGAAIIKAR  239 (332)
Q Consensus       165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~--~---~~~~~~~~~v~~~~~~i~~~k  239 (332)
                      ++++|+++++++.+|+++ ||||||+++||+||+++|    +|+|+.+++.+.  .   +..+++.+++++++++|++.|
T Consensus       150 ~~~la~~~~v~~~~v~~~-viGeHg~~~~~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~k  224 (308)
T cd05292         150 RYLLGEHLGVDPRSVHAY-IIGEHGDSEVAVWSSANI----GGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIERK  224 (308)
T ss_pred             HHHHHHHhCCCccceece-eeccCCCcEEecceeeeE----CCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999988 589999999999999999    999999886541  1   224679999999999999999


Q ss_pred             CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      |+++|.+ |.++++++.+ |..| +++++|+|++++|+||+ +++|+|+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       225 g~t~~~~-a~a~~~i~~a-il~~-~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-~~L~~~E~~~l~~s~~  299 (308)
T cd05292         225 GATYYAI-GLALARIVEA-ILRD-ENSVLTVSSLLDGQYGI-KDVALSLPCIVGRSGVERVLP-PPLSEEEEEALRASAE  299 (308)
T ss_pred             CccHHHH-HHHHHHHHHH-HHcC-CCcEEEEEEEEcccCCC-CCEEEEEEEEEeCCceEEecC-CCCCHHHHHHHHHHHH
Confidence            9877655 5688997765 6667 89999999999999998 79999999997 999999998 9999999999999999


Q ss_pred             HHHHHHHH
Q 020022          319 ELSEEKAL  326 (332)
Q Consensus       319 ~i~~~~~~  326 (332)
                      .|++.++.
T Consensus       300 ~i~~~~~~  307 (308)
T cd05292         300 VLKEAIES  307 (308)
T ss_pred             HHHHHHhh
Confidence            99988763

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=100.00  E-value=7.2e-60  Score=437.08  Aligned_cols=303  Identities=25%  Similarity=0.414  Sum_probs=268.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~~~~~al~~aD   83 (332)
                      |||+|+||+|.+|++++..|+..++.+     +|+|+|+++..+++++.++|+.|......  .+++.+++ ++++++||
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~-----~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aD   74 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVK-----EINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSD   74 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCC-----EEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCC
Confidence            599999977999999999999988765     89999996544788999999998643322  24444444 77899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~  162 (332)
                      +||+++|.|++++++|.+++..|+++++++++.|.+++ |++++|+++||+|++|++++++ +|+|++| |+.+|.|||+
T Consensus        75 iViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~npvd~~t~~~~~~-~g~~~~~viG~gt~LDs~  152 (309)
T cd05294          75 IVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNPVDVMTYKALKE-SGFDKNRVFGLGTHLDSL  152 (309)
T ss_pred             EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHh-cCCCHHHEeeccchHHHH
Confidence            99999999999999999999999999999999999999 5799999999999999999998 6899998 5667999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS  242 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~  242 (332)
                      |++++||+++++++++|++++ +||||++|||+||++++    +|.|+.++++.+.+..+++.+++++++++|++.||++
T Consensus       153 R~~~~la~~l~v~~~~v~~~v-iGeHg~s~~~~~S~~~i----~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~kg~t  227 (309)
T cd05294         153 RFKVAIAKHFNVHISEVHTRI-IGEHGDSMVPLISSTSI----GGIPIKRFPEYKDFDVEKIVETVKNAGQNIISLKGGS  227 (309)
T ss_pred             HHHHHHHHHHCcChHHeEEEE-EecCCCceEeeeeecEE----CCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            999999999999999999885 79999999999999999    9999998865333445789999999999999999987


Q ss_pred             chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCC-CCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHH
Q 020022          243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEEL  320 (332)
Q Consensus       243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~y-gi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  320 (332)
                      .| ++|.++++++.+ +.+| ++.++|+|++++|+| |++ |+++|+||++ ++|++++++ ++|+++|+++|++|++.|
T Consensus       228 ~~-~~a~~~~~ii~a-il~~-~~~v~~vsv~~~g~~~~~~-~~~~svP~~ig~~Gv~~i~~-l~l~~~E~~~l~~s~~~i  302 (309)
T cd05294         228 EY-GPASAISNLVRT-IAND-ERRILTVSTYLEGEIDGIR-DVCIGVPVKLGKNGIEEIVP-IEMDDDEREAFRKSAEIV  302 (309)
T ss_pred             hh-hHHHHHHHHHHH-HHCC-CCeEEEEEEEECCccCCCC-CeEEEeEEEEcCCccEEEeC-CCCCHHHHHHHHHHHHHH
Confidence            65 566788997765 6677 899999999999997 996 9999999997 999999998 999999999999999999


Q ss_pred             HHHHHH
Q 020022          321 SEEKAL  326 (332)
Q Consensus       321 ~~~~~~  326 (332)
                      ++.++.
T Consensus       303 ~~~~~~  308 (309)
T cd05294         303 KKYTRE  308 (309)
T ss_pred             HHHHhc
Confidence            987653

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=7.2e-60  Score=436.05  Aligned_cols=297  Identities=25%  Similarity=0.383  Sum_probs=260.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--ccceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--LKGVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--~~~~~~~~~~~~al~~aD   83 (332)
                      +||+||| +|.||+.+|+.++..+..      +++|+|+++  +..++.++|+.|.....  ..+++.+++ ++++++||
T Consensus         2 ~KV~VIG-aG~vG~~iA~~la~~g~~------~VvlvDi~~--~l~~g~a~d~~~~~~~~~~~~~i~~t~d-~~~~~~aD   71 (305)
T TIGR01763         2 KKISVIG-AGFVGATTAFRLAEKELA------DLVLLDVVE--GIPQGKALDMYEASPVGGFDTKVTGTNN-YADTANSD   71 (305)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHcCCC------eEEEEeCCC--ChhHHHHHhhhhhhhccCCCcEEEecCC-HHHhCCCC
Confidence            5999999 699999999999987642      699999974  56677888888765322  235555555 45699999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~  162 (332)
                      +||+++|.|++++++|.+++..|++++++++++|.+++ |++++|++|||+|++|++++++ +|+|++|+ +.+|.|||+
T Consensus        72 iVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~-p~~~iIv~tNP~di~t~~~~~~-sg~~~~rviG~g~~lds~  149 (305)
T TIGR01763        72 IVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHS-PNPIIVVVSNPLDAMTYVAWQK-SGFPKERVIGQAGVLDSA  149 (305)
T ss_pred             EEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-HCcCHHHEEEeccchHHH
Confidence            99999999999999999999999999999999999998 6799999999999999999998 79999995 666799999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHh--cC
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA--RK  240 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~--kg  240 (332)
                      |+++++|+++++++++|++++ |||||+++||+||++++    +|+|+.+++.++.  .+++.+++++++++|++.  ||
T Consensus       150 R~~~~la~~l~v~~~~v~~~v-~GeHg~s~~~~wS~~~i----~g~~~~~~~~~~~--~~~l~~~v~~~g~~ii~~~~kg  222 (305)
T TIGR01763       150 RFRTFIAMELGVSVQDVTACV-LGGHGDAMVPLVRYSTV----AGIPVADLISAER--IAEIVERTRKGGGEIVNLLKQG  222 (305)
T ss_pred             HHHHHHHHHhCcCHHHeeeeE-EecCCCcEEeeeeeeEE----CCEEHHHhcCHHH--HHHHHHHHHHHHHHHHHhcCCC
Confidence            999999999999999999884 89999999999999999    9999999875543  368999999999999997  55


Q ss_pred             ccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHH
Q 020022          241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEE  319 (332)
Q Consensus       241 ~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  319 (332)
                      ++. +++|.++++++ +++++| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.
T Consensus       223 ~t~-~~~a~~~~~i~-~ai~~~-~~~v~~~s~~~~~~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E~~~l~~s~~~  297 (305)
T TIGR01763       223 SAY-YAPAASVVEMV-EAILKD-RKRVLPCAAYLDGQYGI-DGIYVGVPVILGKNGVEHIYE-LKLDQSELALLNKSAKI  297 (305)
T ss_pred             ChH-HHHHHHHHHHH-HHHhCC-CCeEEEEEEEecccCCC-CceEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHH
Confidence            555 45566788865 468888 89999999999999999 79999999997 999999998 99999999999999999


Q ss_pred             HHHHHHH
Q 020022          320 LSEEKAL  326 (332)
Q Consensus       320 i~~~~~~  326 (332)
                      |++.++.
T Consensus       298 i~~~~~~  304 (305)
T TIGR01763       298 VDENCKM  304 (305)
T ss_pred             HHHHHhc
Confidence            9988753

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PTZ00325 malate dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-58  Score=423.10  Aligned_cols=299  Identities=23%  Similarity=0.319  Sum_probs=255.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC---hhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD---AVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~---~~~al~   80 (332)
                      ++.||+||||+|+||+++++.|+..++.+     +++|+|++    +++++++||+|+..  ...+...++   .+++++
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~-----elvL~Di~----~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l~   75 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVS-----ELSLYDIV----GAPGVAADLSHIDT--PAKVTGYADGELWEKALR   75 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCC-----EEEEEecC----CCcccccchhhcCc--CceEEEecCCCchHHHhC
Confidence            45799999977999999999999777655     89999993    46888999999764  223433322   289999


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH----HhCCCCCCCcEEEe
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK----EFAPSIPAKNITCL  156 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~----~~~~~~~~~~i~~~  156 (332)
                      |||+||+++|.+++++++|.+++..|+++++++++.+++++ ++++++++|||+|+++++++    +. +++|+++++|.
T Consensus        76 gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~-sg~p~~~viG~  153 (321)
T PTZ00325         76 GADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKKA-GVYDPRKLFGV  153 (321)
T ss_pred             CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhhc-cCCChhheeec
Confidence            99999999999999999999999999999999999999998 57899999999999999995    65 79999997666


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC-ceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHH
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAI  235 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~-~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i  235 (332)
                      +.|||+||++++|++++++|++|+++ ||||||+ +|||+||++       |.|+.    ++.  .+++.+++++++++|
T Consensus       154 g~LDs~R~r~~la~~l~v~~~~V~~~-VlGeHGd~s~v~~~S~~-------g~~l~----~~~--~~~i~~~v~~~g~~I  219 (321)
T PTZ00325        154 TTLDVVRARKFVAEALGMNPYDVNVP-VVGGHSGVTIVPLLSQT-------GLSLP----EEQ--VEQITHRVQVGGDEV  219 (321)
T ss_pred             hhHHHHHHHHHHHHHhCcChhheEEE-EEeecCCcccccchhcc-------CCCCC----HHH--HHHHHHHHHHHHHHH
Confidence            67999999999999999999999977 5899999 899999998       34542    222  368999999999999


Q ss_pred             HHhcC--ccchHHHHHHHHHHHHHHHc--CCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHH
Q 020022          236 IKARK--LSSALSAASSACDHIRDWVL--GTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSR  310 (332)
Q Consensus       236 ~~~kg--~~~~~~~a~~~~~~i~~~i~--~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~  310 (332)
                      ++.||  +++++++|.++++++.+++.  +| ++.++|++ +++|+||. +|+|+|+||++ ++|++++++.++|+++|+
T Consensus       220 i~~k~~kg~t~~g~a~a~~~i~~ail~~~~~-~~~v~~~~-~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~  296 (321)
T PTZ00325        220 VKAKEGAGSATLSMAYAAAEWSTSVLKALRG-DKGIVECA-FVESDMRP-ECPFFSSPVELGKEGVERVLPIGPLNAYEE  296 (321)
T ss_pred             HhcccCCCCchHHHHHHHHHHHHHHHhhcCC-CCCeEEEE-EEecCCCC-CCeEEEEEEEEcCCeeEEEcCCCCCCHHHH
Confidence            99773  34555667789998876553  34 67888885 99999997 89999999997 999999986469999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhC
Q 020022          311 KKLDLTAEELSEEKALAYSCLS  332 (332)
Q Consensus       311 ~~l~~s~~~i~~~~~~~~~~~~  332 (332)
                      ++|++|++.|++.++.++.|.+
T Consensus       297 ~~l~~S~~~i~~~~~~~~~~~~  318 (321)
T PTZ00325        297 ELLEAAVPDLKKNIEKGLEFAR  318 (321)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999874

>PRK06223 malate dehydrogenase; Reviewed

Probab=100.00  E-value=6.2e-57  Score=418.92  Aligned_cols=299  Identities=25%  Similarity=0.405  Sum_probs=261.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~~~~~al~~a   82 (332)
                      ++||+||| +|.||+++++.++..++     . +++|+|+++  +++++.++|+.|......  .+++.++ .++++++|
T Consensus         2 ~~KI~VIG-aG~vG~~ia~~la~~~~-----~-ev~L~D~~~--~~~~~~~~dl~~~~~~~~~~~~i~~~~-d~~~~~~a   71 (307)
T PRK06223          2 RKKISIIG-AGNVGATLAHLLALKEL-----G-DVVLFDIVE--GVPQGKALDIAEAAPVEGFDTKITGTN-DYEDIAGS   71 (307)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-----e-EEEEEECCC--chhHHHHHHHHhhhhhcCCCcEEEeCC-CHHHHCCC
Confidence            36999999 59999999999987654     1 799999974  677888999988754333  3444444 45789999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDH  161 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds  161 (332)
                      |+||+++|.|++++++|.+++.+|+++++++++.|++++ |++++|++|||+|++|++++++ +++|++|+ +.+|.+|+
T Consensus        72 DiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~d~~~~~~~~~-s~~~~~~viG~gt~lds  149 (307)
T PRK06223         72 DVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYA-PDAIVIVVTNPVDAMTYVALKE-SGFPKNRVIGMAGVLDS  149 (307)
T ss_pred             CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCcccEEEeCCCcHH
Confidence            999999999999999999999999999999999999999 5789999999999999999998 69999995 55689999


Q ss_pred             HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHh--c
Q 020022          162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA--R  239 (332)
Q Consensus       162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~--k  239 (332)
                      +||+++||+++++++++|++++ +|+||++++|+||++++    +|.|+.+++.+ .| .+++.+.++++++++++.  |
T Consensus       150 ~r~~~~la~~l~v~~~~v~~~v-iGehg~s~~p~~S~~~v----~g~~~~~~~~~-~~-~~~l~~~v~~~~~~ii~~~~k  222 (307)
T PRK06223        150 ARFRTFIAEELNVSVKDVTAFV-LGGHGDSMVPLVRYSTV----GGIPLEDLLSK-EK-LDEIVERTRKGGAEIVGLLKT  222 (307)
T ss_pred             HHHHHHHHHHhCcChhhCcccE-EcCCCCcceEchhhCEE----CCEEHHHhCCh-HH-HHHHHHHHHHHHHHHHhhccc
Confidence            9999999999999999999886 79999999999999999    99999988543 34 368999999999999996  6


Q ss_pred             CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      |++. ++.|.++++++.+ ++.+ ++.++|+|++++|+||+ +|++||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       223 g~t~-~~~A~~~~~ii~a-il~~-~~~~~~~~v~~~g~yg~-~~~~~s~P~~i~~~Gv~~i~~-~~l~~~e~~~l~~s~~  297 (307)
T PRK06223        223 GSAY-YAPAASIAEMVEA-ILKD-KKRVLPCSAYLEGEYGV-KDVYVGVPVKLGKNGVEKIIE-LELDDEEKAAFDKSVE  297 (307)
T ss_pred             CChh-HHHHHHHHHHHHH-HHcC-CCcEEEEEEEecCcCCC-CCeEEEeEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHH
Confidence            6554 4456678887765 6667 89999999999999999 89999999997 999999998 9999999999999999


Q ss_pred             HHHHHHHHH
Q 020022          319 ELSEEKALA  327 (332)
Q Consensus       319 ~i~~~~~~~  327 (332)
                      +|++.++..
T Consensus       298 ~l~~~~~~~  306 (307)
T PRK06223        298 AVKKLIEAL  306 (307)
T ss_pred             HHHHHHHhc
Confidence            999988753

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=100.00  E-value=9.4e-57  Score=416.01  Aligned_cols=293  Identities=26%  Similarity=0.419  Sum_probs=256.8

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeCChhhhcCCCcEE
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~~~~~al~~aDiV   85 (332)
                      |+||| +|.||+.++..++..++.      +|+|+|+++  +++++..+|+.|......  .+++.+++ ++++++||+|
T Consensus         1 I~IIG-aG~vG~~ia~~la~~~l~------eV~L~Di~e--~~~~g~~~dl~~~~~~~~~~~~I~~t~d-~~~l~dADiV   70 (300)
T cd01339           1 ISIIG-AGNVGATLAQLLALKELG------DVVLLDIVE--GLPQGKALDISQAAPILGSDTKVTGTND-YEDIAGSDVV   70 (300)
T ss_pred             CEEEC-CCHHHHHHHHHHHhCCCc------EEEEEeCCC--cHHHHHHHHHHHhhhhcCCCeEEEEcCC-HHHhCCCCEE
Confidence            68999 599999999999877642      799999985  577888899988654332  34444444 6889999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHHHH
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRA  164 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r~  164 (332)
                      |+++|.|++++++|.+++.+|++++++++++|+++| |++++|++|||+|+++++++++ +++|++|+ +.+|.+|++|+
T Consensus        71 Iit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~-p~~~iIv~sNP~di~t~~~~~~-s~~~~~rviGlgt~lds~r~  148 (300)
T cd01339          71 VITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYA-PNAIVIVVTNPLDVMTYVAYKA-SGFPRNRVIGMAGVLDSARF  148 (300)
T ss_pred             EEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCHHHEEEecchHHHHHH
Confidence            999999999999999999999999999999999999 5689999999999999999998 69999885 55679999999


Q ss_pred             HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhc--Ccc
Q 020022          165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKAR--KLS  242 (332)
Q Consensus       165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~k--g~~  242 (332)
                      ++++|+++++++++|++++ +|+||++++|+||++++    +|.|+.+++.++.  .+++.+++++++++|++.|  |++
T Consensus       149 ~~~la~~l~v~~~~v~~~v-~G~hg~~~~~~~s~~~v----~g~~~~~~~~~~~--~~~~~~~v~~~~~~ii~~k~~g~t  221 (300)
T cd01339         149 RYFIAEELGVSVKDVQAMV-LGGHGDTMVPLPRYSTV----GGIPLTELITKEE--IDEIVERTRNGGAEIVNLLKTGSA  221 (300)
T ss_pred             HHHHHHHhCCCccceEEEE-EeCCCCcceecceecEE----CCEEHHHhcChHH--HHHHHHHHHHHHHHHHhhcCCCch
Confidence            9999999999999999886 79999999999999999    9999998876544  3789999999999999976  655


Q ss_pred             chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHH
Q 020022          243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELS  321 (332)
Q Consensus       243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  321 (332)
                      +| ++|.++++++. ++++| ++.++|+|++++|+||++ |+|||+||++ ++|++++++ ++|+++|+++|++|++.|+
T Consensus       222 ~~-~~a~~~~~i~~-ail~~-~~~i~~~s~~~~g~yg~~-~~~~s~P~~ig~~G~~~~~~-l~l~~~E~~~l~~s~~~l~  296 (300)
T cd01339         222 YY-APAAAIAEMVE-AILKD-KKRVLPCSAYLEGEYGIK-DIFVGVPVVLGKNGVEKIIE-LDLTDEEKEAFDKSVESVK  296 (300)
T ss_pred             hH-HHHHHHHHHHH-HHHcC-CCcEEEEEEEeccccCCC-CeEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHHHH
Confidence            55 45667888665 46677 899999999999999995 9999999997 999999998 9999999999999999999


Q ss_pred             HHH
Q 020022          322 EEK  324 (332)
Q Consensus       322 ~~~  324 (332)
                      +.+
T Consensus       297 ~~~  299 (300)
T cd01339         297 ELI  299 (300)
T ss_pred             HHh
Confidence            865

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PLN00106 malate dehydrogenase

Probab=100.00  E-value=8.7e-57  Score=415.91  Aligned_cols=292  Identities=27%  Similarity=0.400  Sum_probs=248.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-cceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~~~~~~~~~~~al~~aD   83 (332)
                      +.||+||||+|+||+++++.|+..++.+     |++|+|+++    ++++++||.|+..... ..+...++.+++++|||
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~Di~~----~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aD   88 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVS-----ELHLYDIAN----TPGVAADVSHINTPAQVRGFLGDDQLGDALKGAD   88 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCC-----EEEEEecCC----CCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCC
Confidence            5799999977999999999999888776     899999984    6888999999875321 11223445689999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc----chHHHHHHhCCCCCCCcEEEechH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN----TNALILKEFAPSIPAKNITCLTRL  159 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~----~~~~~~~~~~~~~~~~~i~~~t~l  159 (332)
                      +||++||.+++++++|++++..|.++++++++.+++++ |+++++++|||+|    ++++.+++. +++|+++++|.+.|
T Consensus        89 iVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~-s~~p~~~viG~~~L  166 (323)
T PLN00106         89 LVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKA-GVYDPKKLFGVTTL  166 (323)
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHc-CCCCcceEEEEecc
Confidence            99999999999999999999999999999999999999 6899999999999    899999997 79999998777789


Q ss_pred             HHHHHHHHHHHHcCCCCCCeeeeEEEeccCC-ceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHh
Q 020022          160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA  238 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~-~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~  238 (332)
                      |++||++++|+++|+++.+|++++ +||||+ +|||+||++++    ..    + +.++.  .+++.+++++++++|++.
T Consensus       167 Ds~Rl~~~lA~~lgv~~~~V~~~V-iGeHg~~s~vp~~S~~~~----~~----~-~~~~~--~~~i~~~v~~~g~~Ii~~  234 (323)
T PLN00106        167 DVVRANTFVAEKKGLDPADVDVPV-VGGHAGITILPLLSQATP----KV----S-FTDEE--IEALTKRIQNGGTEVVEA  234 (323)
T ss_pred             hHHHHHHHHHHHhCCChhheEEEE-EEeCCCccEeeehhccee----cc----c-CCHHH--HHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999885 799965 99999999987    21    1 22222  368999999999999997


Q ss_pred             c---CccchHHHHHHHHHHHHHHHcC--CCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHHH
Q 020022          239 R---KLSSALSAASSACDHIRDWVLG--TPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSRK  311 (332)
Q Consensus       239 k---g~~~~~~~a~~~~~~i~~~i~~--~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~~  311 (332)
                      |   | ++++++|.++++++.+++.+  + ++.++|+| +.+|+|  ..++|||+||++ ++|++++++ + +|+++|++
T Consensus       235 k~~kg-~t~~~~a~a~~~ii~ail~~~~~-~~~v~~~s-~~~~~~--~~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~  308 (323)
T PLN00106        235 KAGAG-SATLSMAYAAARFADACLRGLNG-EADVVECS-YVQSEV--TELPFFASKVRLGRNGVEEVLG-LGPLSEYEQK  308 (323)
T ss_pred             ccCCC-CchHHHHHHHHHHHHHHHhccCC-CceEEEEE-EECccc--CCceEEEEEEEEcCCeeEEEcC-CCCCCHHHHH
Confidence            4   5 45456777899988764443  3 67899999 666665  223999999997 999999998 7 99999999


Q ss_pred             HHHHHHHHHHHHHH
Q 020022          312 KLDLTAEELSEEKA  325 (332)
Q Consensus       312 ~l~~s~~~i~~~~~  325 (332)
                      +|++|++.|++.++
T Consensus       309 ~l~~S~~~i~~~~~  322 (323)
T PLN00106        309 GLEALKPELKASIE  322 (323)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998765

>PRK05086 malate dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-56  Score=413.79  Aligned_cols=298  Identities=23%  Similarity=0.332  Sum_probs=252.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe--eCChhhhcCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA--TTDAVEACTGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~--~~~~~~al~~a   82 (332)
                      |||+||||+|.+|+++++.|.. .+...     +++|+|+++   ..+++++|++|..  ....+..  ..+.+++++++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~-----el~L~d~~~---~~~g~alDl~~~~--~~~~i~~~~~~d~~~~l~~~   70 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGS-----ELSLYDIAP---VTPGVAVDLSHIP--TAVKIKGFSGEDPTPALEGA   70 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCcc-----EEEEEecCC---CCcceehhhhcCC--CCceEEEeCCCCHHHHcCCC
Confidence            5999999889999999998865 34333     899999974   3567889998752  1123333  34558999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH----HhCCCCCCCcEEEech
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK----EFAPSIPAKNITCLTR  158 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~----~~~~~~~~~~i~~~t~  158 (332)
                      |+||+++|.+++++++|.+++..|+++++++++.|++++ |+++++++|||+|+||++++    ++ +|+|++|++|.|.
T Consensus        71 DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~D~~t~~~~~~~~~~-sg~p~~rvig~~~  148 (312)
T PRK05086         71 DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPVNTTVAIAAEVLKKA-GVYDKNKLFGVTT  148 (312)
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchHHHHHHHHHHHHHh-cCCCHHHEEeeec
Confidence            999999999999999999999999999999999999998 57999999999999999988    76 7999999767777


Q ss_pred             HHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC-ceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH
Q 020022          159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK  237 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~-~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~  237 (332)
                      |||+|+++++|++++++|++|+++ ||||||+ ++||+||++      +|.|+.+    +.  .+++.+++++++++|++
T Consensus       149 Lds~R~~~~ia~~l~~~~~~v~~~-v~GeHg~~s~~p~~S~~------~g~~l~~----~~--~~~i~~~v~~~g~~ii~  215 (312)
T PRK05086        149 LDVIRSETFVAELKGKQPGEVEVP-VIGGHSGVTILPLLSQV------PGVSFTE----QE--VADLTKRIQNAGTEVVE  215 (312)
T ss_pred             HHHHHHHHHHHHHhCCChhheEEE-EEEecCCCceecccccc------CCccCCH----HH--HHHHHHHHHHHHHHHHh
Confidence            999999999999999999999977 5899977 999999999      4677732    22  36899999999999999


Q ss_pred             hc--CccchHHHHHHHHHHHHHHHcC-CCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHHHH
Q 020022          238 AR--KLSSALSAASSACDHIRDWVLG-TPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSRKK  312 (332)
Q Consensus       238 ~k--g~~~~~~~a~~~~~~i~~~i~~-~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~~~  312 (332)
                      .|  ++++++++|.++++++.+++.+ +++++++|++ +++|+ |. +|+|||+||++ ++|++++++ + +|+++|+++
T Consensus       216 ~k~~~g~t~~~~a~a~~~~v~ai~~~~~~~~~v~~~~-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~~  291 (312)
T PRK05086        216 AKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECA-YVEGD-GK-YARFFAQPVLLGKNGVEERLP-IGTLSAFEQNA  291 (312)
T ss_pred             cccCCCCchhhHHHHHHHHHHHHHhcCCCCCcEEEEE-EEecc-CC-cceEEEEEEEEcCCeeEEEcC-CCCCCHHHHHH
Confidence            87  2345556677899988775533 2277899976 78886 76 78999999997 999999998 7 999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhC
Q 020022          313 LDLTAEELSEEKALAYSCLS  332 (332)
Q Consensus       313 l~~s~~~i~~~~~~~~~~~~  332 (332)
                      |++|++.|++.++...+|++
T Consensus       292 l~~s~~~i~~~~~~g~~~~~  311 (312)
T PRK05086        292 LEGMLDTLKKDIALGEEFVN  311 (312)
T ss_pred             HHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999974

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=100.00  E-value=7e-52  Score=376.68  Aligned_cols=258  Identities=33%  Similarity=0.510  Sum_probs=230.6

Q ss_pred             EEEEcCCCchHHHHHHHHHhcc--cCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCCcE
Q 020022            8 VLVTGAAGQIGYALVPMIARGV--MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~--~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~aDi   84 (332)
                      |+||||+|.+|+.+++.|+..+  ...     +|+|+|+++  +++++.++|++|..... ..+++.+++.+++++|||+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~-----el~L~D~~~--~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDi   73 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAI-----ELVLYDIDE--EKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADV   73 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcce-----EEEEEeCCc--ccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCE
Confidence            6899966999999999999877  322     899999985  78899999999987654 3466767777999999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHHH
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRA  164 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~  164 (332)
                      ||+++|.++++|++|.+++.+|++++++++++|+++| |++|+|++|||+|++|++++++ +|+|++|++|.|.+|+.|+
T Consensus        74 Vv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~~i~~tNP~d~~t~~~~~~-sg~~~~kviG~~~ld~~r~  151 (263)
T cd00650          74 VIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS-PDAWIIVVSNPVDIITYLVWRY-SGLPKEKVIGLGTLDPIRF  151 (263)
T ss_pred             EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCchhEEEeecchHHHH
Confidence            9999999999999999999999999999999999999 6899999999999999999999 6999999655444999999


Q ss_pred             HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccch
Q 020022          165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSA  244 (332)
Q Consensus       165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~  244 (332)
                      ++++|+++++++++|+.+ |||+||++++|+||+++                                            
T Consensus       152 ~~~la~~l~v~~~~v~~~-v~G~hg~~~~~~~s~~~--------------------------------------------  186 (263)
T cd00650         152 RRILAEKLGVDPDDVKVY-ILGEHGGSQVPDWSTVR--------------------------------------------  186 (263)
T ss_pred             HHHHHHHhCCCccceEEE-EEEcCCCceEeccccch--------------------------------------------
Confidence            999999999999999966 59999999999999764                                            


Q ss_pred             HHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 020022          245 LSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEE  323 (332)
Q Consensus       245 ~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~  323 (332)
                        .|.++++++.+ +.+| ++.++|+|++++|+||+|+|++||+||++ ++|++++++ ++|+++|+++|+++++.++..
T Consensus       187 --~a~~~~~ii~a-i~~~-~~~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~-~~l~~~e~~~l~~s~~~~~~~  261 (263)
T cd00650         187 --IATSIADLIRS-LLND-EGEILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIE-VGLTDFELEKLQKSADTLKKE  261 (263)
T ss_pred             --HHHHHHHHHHH-HHcC-CCEEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEec-CCCCHHHHHHHHHHHHHHHHH
Confidence              34567887766 5566 89999999999999998899999999997 999999998 899999999999999999876


Q ss_pred             H
Q 020022          324 K  324 (332)
Q Consensus       324 ~  324 (332)
                      +
T Consensus       262 ~  262 (263)
T cd00650         262 L  262 (263)
T ss_pred             h
Confidence            4

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=4.6e-48  Score=337.27  Aligned_cols=301  Identities=26%  Similarity=0.346  Sum_probs=251.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~a   82 (332)
                      +..||+|.||+|.+|+.+..+|.+..+.+     +++|||+..    ..|.+.||+|..... ...+....+++.|+++|
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs-----~LaLYDi~~----~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~a   97 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIAN----TPGVAADLSHINTNSSVVGFTGADGLENALKGA   97 (345)
T ss_pred             CcceEEEEecCCccCccHHHHHhcCcccc-----eeeeeeccc----CCcccccccccCCCCceeccCChhHHHHHhcCC
Confidence            35799999999999999999999888776     899999973    688999999987532 23444455789999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC---CCCCCCcEEEechH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA---PSIPAKNITCLTRL  159 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~---~~~~~~~i~~~t~l  159 (332)
                      |+||+-||+||+|||+|+|+|..|+.|+++++..+.++| |++.+.++|||++....++.+..   .-|+++|++|.|+|
T Consensus        98 dvVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~c-P~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVTtL  176 (345)
T KOG1494|consen   98 DVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCC-PNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTL  176 (345)
T ss_pred             CEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhC-ccceeEeecCcccccchHHHHHHHHcCCCCccceeceehh
Confidence            999999999999999999999999999999999999999 67999999999998766655443   34788899999999


Q ss_pred             HHHHHHHHHHHHcCCCC-CCeeeeEEEeccCC-ceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH
Q 020022          160 DHNRALGQISEKLNVQV-SDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK  237 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~-~~v~~~~v~G~hg~-~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~  237 (332)
                      |..|.++++++.++++| .+++ ++|+|+|.. +.+|++|++++.        .. +.++  ..+.++++++++|.|+.+
T Consensus       177 DvVRA~tFv~~~~~~~p~~~v~-VPVIGGHaG~TIlPLlSQ~~p~--------~~-~~~~--~~~~Lt~RiQ~gGtEVV~  244 (345)
T KOG1494|consen  177 DVVRANTFVAEVLNLDPAEDVD-VPVIGGHAGITIIPLLSQCKPP--------FR-FTDD--EIEALTHRIQNGGTEVVK  244 (345)
T ss_pred             hhhhHHHHHHHHhCCCchhcCC-cceecCcCCceEeeecccCCCc--------cc-CCHH--HHHHHHHHHHhCCceEEE
Confidence            99999999999999999 4476 778899975 999999999871        11 1122  236889999999999999


Q ss_pred             hcCc--cchHHHHHHHHHHH---HHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHH
Q 020022          238 ARKL--SSALSAASSACDHI---RDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRK  311 (332)
Q Consensus       238 ~kg~--~~~~~~a~~~~~~i---~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~  311 (332)
                      .|.+  +..+++|+|.++..   ...+.++ ++.+.|..|.++. +++   .||+.|+++ ++|++++....+|+++|++
T Consensus       245 AKaGaGSATLSMAyAga~fa~s~lrgl~G~-~~v~ecafV~s~~-~~~---~fFaspv~Lg~~Gv~~v~~l~~lsd~E~~  319 (345)
T KOG1494|consen  245 AKAGAGSATLSMAYAGAKFADSLLRGLNGD-EDVVECAFVASPV-TEL---PFFATPVTLGKKGVEEVLGLGKLSDYEEK  319 (345)
T ss_pred             eccCCCchhhhHHHHHHHHHHHHHHHhCCC-CCeEEEeEEeccc-cCc---cceeceEEecCCceeeecCCCccCHHHHH
Confidence            8853  56678777765543   3346676 6777777777763 455   499999987 9999999986699999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhh
Q 020022          312 KLDLTAEELSEEKALAYSCL  331 (332)
Q Consensus       312 ~l~~s~~~i~~~~~~~~~~~  331 (332)
                      .|+.+..+|+..++...+|.
T Consensus       320 ~l~~~~~eLk~sI~KGv~F~  339 (345)
T KOG1494|consen  320 ALEAAKPELKKSIEKGVTFV  339 (345)
T ss_pred             HHHHHHHHHHHHHHhhHHHH
Confidence            99999999999999999985

>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=100.00  E-value=1.7e-36  Score=258.91  Aligned_cols=168  Identities=34%  Similarity=0.463  Sum_probs=150.4

Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh----cccchhHHHHHHHhhH
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQQRG  232 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~----~~~~~~~~~~~v~~~~  232 (332)
                      |.||++||++++|+++|++|.+++.+ ||||||+++||+||++++    +|.|+.++.+.    ..|..+++.+++++++
T Consensus         1 T~LDs~R~~~~la~~l~v~~~~v~~~-ViGeHg~s~~~~~S~~~v----~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g   75 (174)
T PF02866_consen    1 TMLDSARFRYFLAEKLGVNPSSVNAY-VIGEHGDSQVPDWSHAKV----GGVPLLSYAKPSGKLSEEELEELTERVRKAG   75 (174)
T ss_dssp             THHHHHHHHHHHHHHHTSGGGGEEEE-EEBSSSTTEEEEGGGEEE----TTEEHHHHHHTTTSSSHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHCcCccceEEE-EEecCCcceeeeeecccc----cccccccccccccchhHHhhhccccccEecc
Confidence            78999999999999999999999977 589999999999999999    99999776543    2455679999999999


Q ss_pred             HHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCc-eEEEEeeEe-cCCcEEEecCCCCCHHHH
Q 020022          233 AAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAG-LIYSFPVTC-RNGEWTIVQGLSIDEFSR  310 (332)
Q Consensus       233 ~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~-~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~  310 (332)
                      ++|++.|++++++++|.++++++.+ |..+ .+.++|+|++++|+||++.+ +|||+||++ ++|++++++.++|+++|+
T Consensus        76 ~~ii~~k~g~t~~s~A~a~~~~v~a-il~~-~~~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~  153 (174)
T PF02866_consen   76 YEIIKAKGGSTSYSIAAAAARIVEA-ILKD-ERRILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQ  153 (174)
T ss_dssp             HHHHHHHSSSCHHHHHHHHHHHHHH-HHTT-HTEEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHH
T ss_pred             ceeeeeccccCcCCHHHHHHHHHHH-Hhhc-ccccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHH
Confidence            9999999656667788899998876 5556 79999999999999999655 999999997 999999997689999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhh
Q 020022          311 KKLDLTAEELSEEKALAYSCL  331 (332)
Q Consensus       311 ~~l~~s~~~i~~~~~~~~~~~  331 (332)
                      ++|++|++.|+++++.+.+|.
T Consensus       154 ~~l~~sa~~l~~~i~~~~~f~  174 (174)
T PF02866_consen  154 EKLKESAKELKKEIEKGLEFV  174 (174)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999883

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=100.00  E-value=7.6e-33  Score=227.94  Aligned_cols=141  Identities=29%  Similarity=0.510  Sum_probs=129.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||||+|.||+++++.|++.++.+     ||+|+|+++  ++++|+++||+|+..+...+..+..+.+++++|||+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~-----ei~L~D~~~--~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLAD-----EIVLIDINE--DKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSS-----EEEEEESSH--HHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCC-----ceEEeccCc--ccceeeehhhhhhhhhcccccccccccccccccccEE
Confidence            599999977999999999999998876     999999984  6899999999999877766677777899999999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      |+++|.++++|++|.+++..|+++++++++.|.+++ |+++++++|||+|++|++++++ +++|++|++|
T Consensus        74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~-p~~~vivvtNPvd~~t~~~~~~-s~~~~~kviG  141 (141)
T PF00056_consen   74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYA-PDAIVIVVTNPVDVMTYVAQKY-SGFPPNKVIG  141 (141)
T ss_dssp             EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHS-TTSEEEE-SSSHHHHHHHHHHH-HTSSGGGEEE
T ss_pred             EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhC-CccEEEEeCCcHHHHHHHHHHh-hCcCcccCcC
Confidence            999999999999999999999999999999999999 6799999999999999999998 7999999654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4

Probab=99.97  E-value=5.6e-29  Score=238.82  Aligned_cols=294  Identities=16%  Similarity=0.169  Sum_probs=198.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCC-CCc-eEEEEEeCCCchhhhhhhHHHHhhhh-c--CCccceEeeCChhhhcC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGT-DQP-VILHMLDIPPAAEALNGVKMELVDAA-F--PLLKGVVATTDAVEACT   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~-~~~-~ei~L~D~~~~~~~l~~~~~dl~~~~-~--~~~~~~~~~~~~~~al~   80 (332)
                      +||+|||| |+   +..+.|+..-+..+ ..+ .||+|+|+++  ++++- +..+.... .  ....++..++|..+|++
T Consensus         1 ~KI~iIGg-GS---~~tp~li~~l~~~~~~l~~~ei~L~Did~--~Rl~~-v~~l~~~~~~~~g~~~~v~~ttD~~~Al~   73 (425)
T cd05197           1 VKIAIIGG-GS---SFTPELVSGLLKTPEELPISEVTLYDIDE--ERLDI-ILTIAKRYVEEVGADIKFEKTMDLEDAII   73 (425)
T ss_pred             CEEEEECC-ch---HhHHHHHHHHHcChhhCCCCEEEEEcCCH--HHHHH-HHHHHHHHHHhhCCCeEEEEeCCHHHHhC
Confidence            59999996 44   34444432211111 122 2899999985  55542 22222211 1  12346788999999999


Q ss_pred             CCcEEEEeCCCC------------CCCC---CC-----HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           81 GVNIAVMVGGFP------------RKEG---ME-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        81 ~aDiVi~~ag~~------------~~~~---~~-----r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                      |||+||.+..+.            .+.|   ++     ......+|+++++++++.|+++| |++|+|++|||+|++|++
T Consensus        74 gADfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~-P~a~lin~TNP~di~t~a  152 (425)
T cd05197          74 DADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLS-PDAWYLNFTNPAGEVTEA  152 (425)
T ss_pred             CCCEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhC-CCcEEEecCChHHHHHHH
Confidence            999999985432            1222   11     22345799999999999999999 689999999999999999


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCCCcchhhhhhh---
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVRELVKD---  216 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~---  216 (332)
                      +++++   |+.|++|.|.. +.|+++.+|+.+|+++++|+.++ +| |||    ++||++++    +|+|+...+.+   
T Consensus       153 ~~~~~---p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v-~GlnHg----~~~s~~~~----~G~~l~p~l~~~~~  219 (425)
T cd05197         153 VRRYV---PPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQY-AGLNHG----IWLNRVRY----NGGDVTPKLDEWVE  219 (425)
T ss_pred             HHHhC---CCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEE-EeccCe----EeeEeEEE----CCeecHHHHHHHHh
Confidence            99983   66787777766 89999999999999999999775 79 999    99999999    78777644321   


Q ss_pred             ---------c-------ccch------------------------hH-HHH---------HHHhhH---HHHHH-----h
Q 020022          217 ---------D-------AWLN------------------------GE-FIT---------TVQQRG---AAIIK-----A  238 (332)
Q Consensus       217 ---------~-------~~~~------------------------~~-~~~---------~v~~~~---~~i~~-----~  238 (332)
                               .       .|..                        ++ +.+         .+.+..   ++..+     .
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~  299 (425)
T cd05197         220 EKSKDWKTENPFVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENP  299 (425)
T ss_pred             ccCccccccccccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcC
Confidence                     0       0100                        00 000         000000   01110     0


Q ss_pred             cC------ccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHH
Q 020022          239 RK------LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSR  310 (332)
Q Consensus       239 kg------~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~  310 (332)
                      +.      ...++  +..++.+|. ++.+| ++.++.++|..+|. -++|.|.++.+||++ ++|+.++.. .+|++...
T Consensus       300 ~~~~~~~r~~~~~--~e~a~~ii~-ai~~~-~~~~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~v-g~lp~~~~  374 (425)
T cd05197         300 SVVELIKRGGRKY--SEAAIPLIR-ALLND-NGARFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKV-GPLDRFVK  374 (425)
T ss_pred             ChhhhhhcCCccc--HHHHHHHHH-HHHcC-CCeEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccc-CCCCHHHH
Confidence            00      01112  245677665 57777 88999999999997 699999999999998 999999865 68988777


Q ss_pred             HHHHHHHHHHHHHHH
Q 020022          311 KKLDLTAEELSEEKA  325 (332)
Q Consensus       311 ~~l~~s~~~i~~~~~  325 (332)
                      .+++.-...-+-.++
T Consensus       375 ~Li~~~~~~e~l~ve  389 (425)
T cd05197         375 GLLRQRKMRERLALE  389 (425)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            766654433333333

Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in

>PRK15076 alpha-galactosidase; Provisional

Probab=99.97  E-value=4.5e-28  Score=233.37  Aligned_cols=292  Identities=16%  Similarity=0.140  Sum_probs=202.8

Q ss_pred             cEEEEEcCCCchHHHHHH--HHH-hcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhhcC--CccceEeeCChhhhc
Q 020022            6 VRVLVTGAAGQIGYALVP--MIA-RGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFP--LLKGVVATTDAVEAC   79 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~--~l~-~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~~~--~~~~~~~~~~~~~al   79 (332)
                      +||+||| +|++|.+.++  .++ ..++.+    .||+|+|+++  ++++ +..+ +.+....  ...+++.+++.++|+
T Consensus         2 ~KIaIIG-aGsvg~~~~~~~~i~~~~~l~~----~evvLvDid~--er~~~~~~l-~~~~~~~~~~~~~i~~ttD~~eal   73 (431)
T PRK15076          2 PKITFIG-AGSTVFTKNLLGDILSVPALRD----AEIALMDIDP--ERLEESEIV-ARKLAESLGASAKITATTDRREAL   73 (431)
T ss_pred             cEEEEEC-CCHHHhHHHHHHHHhhCccCCC----CEEEEECCCH--HHHHHHHHH-HHHHHHhcCCCeEEEEECCHHHHh
Confidence            6999999 5999988776  555 233221    2899999985  5665 4444 5554322  234677788889999


Q ss_pred             CCCcEEEEeCCCC-CCCC--------------CCHHHH--------HHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           80 TGVNIAVMVGGFP-RKEG--------------MERKDV--------MSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        80 ~~aDiVi~~ag~~-~~~~--------------~~r~~~--------~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      +|||+||++++++ .+++              ++|.+.        +.+|+++++++++.|+++| |++|+|++|||+|+
T Consensus        74 ~dADfVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~-p~a~iin~tNP~di  152 (431)
T PRK15076         74 QGADYVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVC-PDALLLNYVNPMAM  152 (431)
T ss_pred             CCCCEEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHC-CCeEEEEcCChHHH
Confidence            9999999999987 4434              455566        8999999999999999999 68999999999999


Q ss_pred             hHHHHHHhCCCCCCCcEEEe--chHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCCCcchhhh
Q 020022          137 NALILKEFAPSIPAKNITCL--TRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVREL  213 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~--t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~~~~  213 (332)
                      +|+.+++    +|+.|++|.  +.+++.   +.+|+.+|+++++|+..+ .| ||.    .|+.+++.    +|+++...
T Consensus       153 vt~~~~~----~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~-~GlNH~----~W~~~~~~----~G~D~~p~  216 (431)
T PRK15076        153 NTWAMNR----YPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRC-AGINHM----AWYLELER----KGEDLYPE  216 (431)
T ss_pred             HHHHHhc----CCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEE-Eeecch----hhheeeeE----CCcchHHH
Confidence            9999874    466675454  677765   789999999999999775 68 776    78888877    55544422


Q ss_pred             hhh---------------------------------c--ccc----hhHHHHHH--------------HhhHHHHH-Hhc
Q 020022          214 VKD---------------------------------D--AWL----NGEFITTV--------------QQRGAAII-KAR  239 (332)
Q Consensus       214 ~~~---------------------------------~--~~~----~~~~~~~v--------------~~~~~~i~-~~k  239 (332)
                      +.+                                 +  .|-    .++..+..              .....+.+ ...
T Consensus       217 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (431)
T PRK15076        217 LRAAAAEGQTRCQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELA  296 (431)
T ss_pred             HHHHHhccCchhcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhh
Confidence            211                                 0  010    11111100              00011111 111


Q ss_pred             Cccch--HHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHH
Q 020022          240 KLSSA--LSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDL  315 (332)
Q Consensus       240 g~~~~--~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~  315 (332)
                      +..++  ...+..++++|. +|.+| .+.++.++|..+|. -++|.|.++.+||.+ ++|+.++.. .+|++..+.+++.
T Consensus       297 ~~~~~~~~~~~e~a~~ii~-ai~~~-~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~~  373 (431)
T PRK15076        297 NAERIEIKRSREYASTIIE-AIETG-EPSVIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNRT  373 (431)
T ss_pred             CCCccccccchHHHHHHHH-HHhcC-CceEEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHHH
Confidence            22111  112245778665 47787 88999999999996 699999999999998 999999876 6899988887765


Q ss_pred             HHHHHHHHHH
Q 020022          316 TAEELSEEKA  325 (332)
Q Consensus       316 s~~~i~~~~~  325 (332)
                      -...-+-.++
T Consensus       374 ~~~~e~l~ve  383 (431)
T PRK15076        374 NINVQELTVE  383 (431)
T ss_pred             HHHHHHHHHH
Confidence            4443333333

>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase

Probab=99.96  E-value=1.9e-27  Score=227.87  Aligned_cols=287  Identities=18%  Similarity=0.168  Sum_probs=197.5

Q ss_pred             cEEEEEcCCCchHH-HHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhhcCC
Q 020022            6 VRVLVTGAAGQIGY-ALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTG   81 (332)
Q Consensus         6 ~kI~IiGa~G~vG~-~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~al~~   81 (332)
                      +||+|||| |++-. .+...|+.. .-++   ..||+|+|+++ +++++...........  ....++..++|..+|++|
T Consensus         1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~---~~ei~L~Did~-~~rl~~v~~~~~~~~~~~~~~~~v~~t~d~~~al~g   75 (419)
T cd05296           1 MKLTIIGG-GSSYTPELIEGLIRRYEELP---VTELVLVDIDE-EEKLEIVGALAKRMVKKAGLPIKVHLTTDRREALEG   75 (419)
T ss_pred             CEEEEECC-chHhHHHHHHHHHhccccCC---CCEEEEecCCh-HHHHHHHHHHHHHHHHhhCCCeEEEEeCCHHHHhCC
Confidence            59999996 55422 233444432 2111   12899999994 3566543222222221  123467788999999999


Q ss_pred             CcEEEEeCCCCCCCCCCHHHH--------------------HHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           82 VNIAVMVGGFPRKEGMERKDV--------------------MSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~--------------------~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                      ||+||++++++..++.++++.                    ..+|+++++++++.|+++| |++|+|++|||++++|+++
T Consensus        76 adfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~-Pda~lin~TNP~~ivt~a~  154 (419)
T cd05296          76 ADFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELA-PDAWLINFTNPAGIVTEAV  154 (419)
T ss_pred             CCEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHH
Confidence            999999988877666555542                    6789999999999999999 6899999999999999999


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCCCcchhhhhhh----
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVRELVKD----  216 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~----  216 (332)
                      +++ +   +.|++|.|..+ .|+++.+|+.+|+++++|+.++ +| ||-    .|+.+++.    +|+++...+.+    
T Consensus       155 ~k~-~---~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v-~GlNH~----~w~~~~~~----~G~D~~p~l~~~~~~  220 (419)
T cd05296         155 LRH-T---GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDY-AGLNHL----GWLRRVLL----DGEDVLPELLEDLAA  220 (419)
T ss_pred             HHh-c---cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEE-Eecccc----eeeeeeeE----CCcccHHHHHHHhhh
Confidence            987 3   45777777774 8999999999999999999775 79 997    67777777    56555432210    


Q ss_pred             -------cccch--------------------hHHHHH-HH---hhH-------HHHH---H------------hcCccc
Q 020022          217 -------DAWLN--------------------GEFITT-VQ---QRG-------AAII---K------------ARKLSS  243 (332)
Q Consensus       217 -------~~~~~--------------------~~~~~~-v~---~~~-------~~i~---~------------~kg~~~  243 (332)
                             ..|..                    ++..+. ..   .++       .+++   +            .++ ..
T Consensus       221 ~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~~r~-g~  299 (419)
T cd05296         221 LLSFEEGLLFGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELEKRG-GA  299 (419)
T ss_pred             ccccccccchHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhHhhc-Cc
Confidence                   01110                    111111 00   011       1111   1            111 01


Q ss_pred             hHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       244 ~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      +++  ..++.+|. ++.+| ++.++.++|..+|. -++|.|.++.+||.+ ++|+.++-. -+|++....+++.-..
T Consensus       300 ~y~--e~a~~ii~-ai~~~-~~~~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~~  371 (419)
T cd05296         300 GYS--EAALALIS-AIYND-KGDIHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVKA  371 (419)
T ss_pred             chH--HHHHHHHH-HHhcC-CCcEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHHH
Confidence            122  45677665 47777 88999999999997 689999999999998 999999865 6899988877665443

Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein

>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases

Probab=99.96  E-value=2.2e-26  Score=221.28  Aligned_cols=297  Identities=17%  Similarity=0.183  Sum_probs=196.4

Q ss_pred             cEEEEEcCCCch-HHHHHHHHHhcccCCCCCc-eEEEEEeCCCchhhhhhhHHHHhhhhc---CCccceEeeCChhhhcC
Q 020022            6 VRVLVTGAAGQI-GYALVPMIARGVMLGTDQP-VILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEACT   80 (332)
Q Consensus         6 ~kI~IiGa~G~v-G~~la~~l~~~~~~~~~~~-~ei~L~D~~~~~~~l~~~~~dl~~~~~---~~~~~~~~~~~~~~al~   80 (332)
                      |||+|||| |++ +-.++..|+...   +..+ .+|+|+|+++  ++++- +..+.....   ....++..++|..+|++
T Consensus         1 ~KI~iIGa-GS~~tp~li~~l~~~~---~~l~~~ei~L~DId~--~rl~~-v~~l~~~~~~~~g~~~~v~~Ttdr~eAl~   73 (437)
T cd05298           1 FKIVIAGG-GSTYTPGIVKSLLDRK---EDFPLRELVLYDIDA--ERQEK-VAEAVKILFKENYPEIKFVYTTDPEEAFT   73 (437)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHhCc---ccCCCCEEEEECCCH--HHHHH-HHHHHHHHHHhhCCCeEEEEECCHHHHhC
Confidence            59999996 443 112333344331   1112 2899999995  55543 222322111   22347888999999999


Q ss_pred             CCcEEEEeCCCC------------CCCC---CC-----HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           81 GVNIAVMVGGFP------------RKEG---ME-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        81 ~aDiVi~~ag~~------------~~~~---~~-----r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                      |||+||.+..+.            .+.|   ++     ..-...||+++++++++.|+++| |++|+|++|||++++|++
T Consensus        74 gADfVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~-pda~lin~tNP~~~vt~~  152 (437)
T cd05298          74 DADFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYS-PDAWILNYSNPAAIVAEA  152 (437)
T ss_pred             CCCEEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHH
Confidence            999999975432            1222   11     12346899999999999999999 689999999999999999


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCC-Ccchhhhhh---
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAG-EKPVRELVK---  215 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~-g~~~~~~~~---  215 (332)
                      +++.   +|..|++|.|+... .+...+|+.+|+++++++..+ .| ||.    .|+.+.+.    + |+++...+.   
T Consensus       153 ~~~~---~~~~kviGlC~~~~-~~~~~la~~lg~~~~~v~~~~-~GlNH~----~w~~~~~~----~~G~D~~p~l~e~~  219 (437)
T cd05298         153 LRRL---FPNARILNICDMPI-AIMDSMAAILGLDRKDLEPDY-FGLNHF----GWFTKIYD----KQGEDLLPKLREHV  219 (437)
T ss_pred             HHHH---CCCCCEEEECCcHH-HHHHHHHHHhCCCHHHceEEE-Eeecch----hhhhheEE----CCCCchHHHHHHHH
Confidence            9986   47678889998774 678889999999999999665 68 777    77777777    5 555443322   


Q ss_pred             -hcc--------------cch---------------------------hHHHHH-----------HHhhHHHHH---H--
Q 020022          216 -DDA--------------WLN---------------------------GEFITT-----------VQQRGAAII---K--  237 (332)
Q Consensus       216 -~~~--------------~~~---------------------------~~~~~~-----------v~~~~~~i~---~--  237 (332)
                       +..              |..                           ++..+.           +.+...+++   +  
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~  299 (437)
T cd05298         220 KENGYLPPDSDEEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKI  299 (437)
T ss_pred             hccCCCcccccccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhh
Confidence             101              100                           011000           000011110   0  


Q ss_pred             -hcC-cc--chH--HHHHHHHHHHHHHHcCCCCceEEEeeeecCCCC-CCCCceEEEEeeEe-cCCcEEEecCCCCCHHH
Q 020022          238 -ARK-LS--SAL--SAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFS  309 (332)
Q Consensus       238 -~kg-~~--~~~--~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~y-gi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E  309 (332)
                       ... ..  ...  .-+.++++++. +|.+| ++.++++|+..+|.| ++|.|+++++||++ ++|+.++.- .+|++..
T Consensus       300 ~~~~~~~~~~~~~~~ya~~a~~ii~-aI~~d-~~~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~  376 (437)
T cd05298         300 IETGTAEGSTFHVDVHGEYIVDLAA-SIAYN-TKERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFY  376 (437)
T ss_pred             hhcCChhhhhhhccchHHHHHHHHH-HHHcC-CCeEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHH
Confidence             000 00  111  12345777665 58888 899999999999998 47899999999997 999999875 6899988


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 020022          310 RKKLDLTAEELSEEKAL  326 (332)
Q Consensus       310 ~~~l~~s~~~i~~~~~~  326 (332)
                      ..+++.-...-+-.+++
T Consensus       377 ~~l~~~~~~~e~l~veA  393 (437)
T cd05298         377 KGLMEQQVAYEKLLVEA  393 (437)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            88776554443333333

Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas

>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases

Probab=99.95  E-value=7.1e-25  Score=211.54  Aligned_cols=296  Identities=16%  Similarity=0.113  Sum_probs=205.0

Q ss_pred             cEEEEEcCCCchHHHHHH--HHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChhhhcC
Q 020022            6 VRVLVTGAAGQIGYALVP--MIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACT   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~--~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~~al~   80 (332)
                      +||+||| +|++|++++.  .++.. .+.+    .+|+|+|+++  ++++....++.+....  ...+++.+++.++|++
T Consensus         1 ~KIaIIG-aGs~G~a~a~~~~i~~~~~~~g----~eV~L~Did~--e~l~~~~~~~~~~~~~~~~~~~I~~ttD~~eal~   73 (423)
T cd05297           1 IKIAFIG-AGSVVFTKNLVGDLLKTPELSG----STIALMDIDE--ERLETVEILAKKIVEELGAPLKIEATTDRREALD   73 (423)
T ss_pred             CeEEEEC-CChHHhHHHHHHHHhcCCCCCC----CEEEEECCCH--HHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHHhc
Confidence            4899999 6999998776  45432 2211    1899999984  6777666666654322  2357777889899999


Q ss_pred             CCcEEEEeCCCCCCCCCCH----------------------HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           81 GVNIAVMVGGFPRKEGMER----------------------KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r----------------------~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                      |||+||++++....++.++                      .....+|++++.++++.++++|| +++++++|||++++|
T Consensus        74 ~AD~Vi~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p-~a~~i~~tNPv~i~t  152 (423)
T cd05297          74 GADFVINTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCP-DAWLLNYANPMAELT  152 (423)
T ss_pred             CCCEEEEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCC-CCEEEEcCChHHHHH
Confidence            9999999988765544443                      23457899999999999999995 899999999999999


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCCCcchhhhhhh-
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVRELVKD-  216 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~-  216 (332)
                      ++++++ ++   .|+.|.|.. +.++++.+|+.+++++++|+..+ +| ||.    .||.+.+.    +|+++...+.+ 
T Consensus       153 ~~~~k~-~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~-~GlNH~----~w~~~~~~----~G~d~~p~l~~~  218 (423)
T cd05297         153 WALNRY-TP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQV-AGINHM----AWLLKFEY----NGEDLYPLLDEW  218 (423)
T ss_pred             HHHHHh-CC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEE-EeeccH----hhhhhheE----CCcchHHHHHHH
Confidence            999998 34   466566644 68999999999999999999775 78 887    77777777    55555433211 


Q ss_pred             --c---cc------ch----------h-----------------HHHHH--------------HHhhHHHHHHhcCc-c-
Q 020022          217 --D---AW------LN----------G-----------------EFITT--------------VQQRGAAIIKARKL-S-  242 (332)
Q Consensus       217 --~---~~------~~----------~-----------------~~~~~--------------v~~~~~~i~~~kg~-~-  242 (332)
                        +   .|      ..          .                 +....              ..+.-+.-...... . 
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (423)
T cd05297         219 IEEGSEEWDQLSPVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLILAEI  298 (423)
T ss_pred             HhccCccchhcccchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhccchh
Confidence              0   00      00          0                 00000              00000000000000 0 


Q ss_pred             ----chH--HHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          243 ----SAL--SAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       243 ----~~~--~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                          ...  ..+..++.+|. +|.+| ++.++.++|..+|. -|+|.|.++.+||.+ ++|+.++.. .+|+.....+++
T Consensus       299 ~~~~~~~~~~~~e~a~~ii~-ai~~~-~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~-g~lp~~~~~l~~  375 (423)
T cd05297         299 DKEELDPVKRSGEYASPIIE-ALVTG-KPRRINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKI-GPLPPQLAALIR  375 (423)
T ss_pred             cchhccccccchHHHHHHHH-HHhcC-CceEEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceeccc-CCCCHHHHHHHH
Confidence                010  01235677665 47777 89999999999997 699999999999998 999999876 689988888776


Q ss_pred             HHHHHHHHHHHH
Q 020022          315 LTAEELSEEKAL  326 (332)
Q Consensus       315 ~s~~~i~~~~~~  326 (332)
                      .-...-+-.+++
T Consensus       376 ~~~~~e~l~veA  387 (423)
T cd05297         376 PRINVQELAVEA  387 (423)
T ss_pred             HHHHHHHHHHHH
Confidence            554433333333

linked to 3D####ucture

>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]

Probab=99.93  E-value=7.7e-24  Score=199.48  Aligned_cols=294  Identities=19%  Similarity=0.238  Sum_probs=194.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCC-CCCce-EEEEEeCCCchhhhhhhHHHHhhhhc---CCccceEeeCChhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLG-TDQPV-ILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~-~~~~~-ei~L~D~~~~~~~l~~~~~dl~~~~~---~~~~~~~~~~~~~~a   78 (332)
                      +..||+|||| |+++..   .++...+.. +..+. ||+|+|+++  ++++ ...++.+...   ....++..++|.++|
T Consensus         2 ~~~KI~iIGg-GSt~tp---~~v~g~l~~~e~l~~~el~L~Did~--~r~~-~i~~~~~~~v~~~g~~~kv~~ttd~~eA   74 (442)
T COG1486           2 KKFKIVIIGG-GSTYTP---KLLLGDLARTEELPVRELALYDIDE--ERLK-IIAILAKKLVEEAGAPVKVEATTDRREA   74 (442)
T ss_pred             CcceEEEECC-CccccH---HHHHHHHhcCccCCcceEEEEeCCH--HHHH-HHHHHHHHHHHhhCCCeEEEEecCHHHH
Confidence            5679999995 666544   222222211 22233 899999985  5555 2222322211   112467778999999


Q ss_pred             cCCCcEEEEeCCC------------CCCCC---CC-----HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           79 CTGVNIAVMVGGF------------PRKEG---ME-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        79 l~~aDiVi~~ag~------------~~~~~---~~-----r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                      |+|||||+.+..+            |.+.|   ++     .--...|+++++-+|++.|+++| |+||++++|||+.++|
T Consensus        75 l~gAdfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~-P~Aw~lNytNP~~~vT  153 (442)
T COG1486          75 LEGADFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVC-PNAWMLNYTNPAAIVT  153 (442)
T ss_pred             hcCCCEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhC-CCceEEeccChHHHHH
Confidence            9999999997543            22333   11     11234789999999999999999 7899999999999999


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCC-CCeeeeEEEe-ccCCceeecCCceeEecCCCCcchhhhhhh
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQV-SDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVRELVKD  216 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~-~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~  216 (332)
                      +++.++.   |.-|+.|.|+.. ......+|+.|++++ ++++.- +.| ||.    .||.+++.    +|.++...+.+
T Consensus       154 eAv~r~~---~~~K~VGlCh~~-~g~~~~lAe~L~~~~~~~l~~~-~aGlNH~----~w~~~~~~----~G~d~~p~l~~  220 (442)
T COG1486         154 EAVRRLY---PKIKIVGLCHGP-IGIAMELAEVLGLEPREDLRYR-VAGLNHM----VWILRVRD----DGEDLYPELLE  220 (442)
T ss_pred             HHHHHhC---CCCcEEeeCCch-HHHHHHHHHHhCCCchhceeEE-Eeechhh----hhhhHhhh----cCccchHHHHH
Confidence            9999973   522788888775 477899999999975 999855 478 887    77777776    44333322110


Q ss_pred             ------------------cccch-----------------------------hHHH------HHHHhhHHHHH-------
Q 020022          217 ------------------DAWLN-----------------------------GEFI------TTVQQRGAAII-------  236 (332)
Q Consensus       217 ------------------~~~~~-----------------------------~~~~------~~v~~~~~~i~-------  236 (332)
                                        ..|..                             .++.      +.+.++-.+.+       
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~  300 (442)
T COG1486         221 ALEEGGSPSEPENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPE  300 (442)
T ss_pred             HHhccccCCccccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhh
Confidence                              00110                             0000      01111100011       


Q ss_pred             --------HhcCcc-chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCC
Q 020022          237 --------KARKLS-SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSI  305 (332)
Q Consensus       237 --------~~kg~~-~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l  305 (332)
                              +.++.+ ...  +..++.+|. +|.+| ++.++.++|..+|. -++|.|..+.+||++ ++|+.++.. ..|
T Consensus       301 ~~~~p~~~~~~~~~~~~~--~e~a~~ii~-Ai~~~-~~~~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~l  375 (442)
T COG1486         301 LKEKPEELEKRIGAGKYS--SEYASNIIN-AIENN-KPSRIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDL  375 (442)
T ss_pred             hhcCchhhhhcCCccccc--HHHHHHHHH-HHhcC-CceEEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCC
Confidence                    111211 022  245788665 58888 89999999999997 799999999999998 999999887 899


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q 020022          306 DEFSRKKLDLTAEELSEE  323 (332)
Q Consensus       306 ~~~E~~~l~~s~~~i~~~  323 (332)
                      ++.-+.+++.....-+-.
T Consensus       376 P~~~~~l~~~~i~~e~l~  393 (442)
T COG1486         376 PEFVKGLMHTNINVEELT  393 (442)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            999998887655443333

>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3

Probab=99.77  E-value=7.2e-18  Score=143.17  Aligned_cols=156  Identities=21%  Similarity=0.246  Sum_probs=106.1

Q ss_pred             EEEEEcCCCchHHHH--HHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH---HHHhhhhcCCccceEeeCChhhhcCC
Q 020022            7 RVLVTGAAGQIGYAL--VPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK---MELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         7 kI~IiGa~G~vG~~l--a~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~---~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      ||+|||| |++-...  ...+....-++   ..||+|+|+++  ++++...   ..+... .....++..++|..+|++|
T Consensus         1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~---~~ei~L~Did~--~RL~~~~~~~~~~~~~-~~~~~~v~~ttd~~eAl~g   73 (183)
T PF02056_consen    1 KITIIGA-GSTYFPLLLLGDLLRTEELS---GSEIVLMDIDE--ERLEIVERLARRMVEE-AGADLKVEATTDRREALEG   73 (183)
T ss_dssp             EEEEETT-TSCCHHHHHHHHHHCTTTST---EEEEEEE-SCH--HHHHHHHHHHHHHHHH-CTTSSEEEEESSHHHHHTT
T ss_pred             CEEEECC-chHhhHHHHHHHHhcCccCC---CcEEEEEcCCH--HHHHHHHHHHHHHHHh-cCCCeEEEEeCCHHHHhCC
Confidence            8999995 7665442  22333322221   23899999984  6665321   222111 1224577889999999999


Q ss_pred             CcEEEEeCCC------------CCCCCCC----------HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           82 VNIAVMVGGF------------PRKEGME----------RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        82 aDiVi~~ag~------------~~~~~~~----------r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                      ||+||.+..+            |.+.|..          ......|+++++.++++.|+++| |+||+|++|||+.++|.
T Consensus        74 ADfVi~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~-PdAw~iNytNP~~~vt~  152 (183)
T PF02056_consen   74 ADFVINQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELC-PDAWLINYTNPMGIVTE  152 (183)
T ss_dssp             ESEEEE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHT-TTSEEEE-SSSHHHHHH
T ss_pred             CCEEEEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEeccChHHHHHH
Confidence            9999998654            3444321          12345799999999999999999 68999999999999999


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCC
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNV  174 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v  174 (332)
                      ++.++.   |.-|+.|.|+.. .-+...+|+.||+
T Consensus       153 a~~r~~---~~~k~vGlCh~~-~~~~~~la~~L~~  183 (183)
T PF02056_consen  153 ALSRYT---PKIKVVGLCHGP-QGTRRQLAKLLGM  183 (183)
T ss_dssp             HHHHHS---TTSEEEEE-SHH-HHHHHHHHHHHT-
T ss_pred             HHHHhC---CCCCEEEECCCH-HHHHHHHHHHhCc
Confidence            999874   435788999886 4778889988874

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=99.03  E-value=1.7e-09  Score=92.75  Aligned_cols=103  Identities=21%  Similarity=0.374  Sum_probs=71.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh----hh----c------CCccceEee
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD----AA----F------PLLKGVVAT   72 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~----~~----~------~~~~~~~~~   72 (332)
                      ||+|+| +|.+|..+|..++..|.       +++|+|.++  +.++.....+.+    ..    .      ....+++.+
T Consensus         1 ~V~ViG-aG~mG~~iA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~   70 (180)
T PF02737_consen    1 KVAVIG-AGTMGRGIAALFARAGY-------EVTLYDRSP--EALERARKRIERLLDRLVRKGRLSQEEADAALARISFT   70 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTS-------EEEEE-SSH--HHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEE
T ss_pred             CEEEEc-CCHHHHHHHHHHHhCCC-------cEEEEECCh--HHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccc
Confidence            799999 69999999999999875       899999985  333221111111    10    0      113578888


Q ss_pred             CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           73 TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        73 ~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      +++.++. +||+||.+.              .++.++.+++...++++|+|++  |+.||...+
T Consensus        71 ~dl~~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~--ilasnTSsl  117 (180)
T PF02737_consen   71 TDLEEAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDT--ILASNTSSL  117 (180)
T ss_dssp             SSGGGGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTS--EEEE--SSS
T ss_pred             cCHHHHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCc--eEEecCCCC
Confidence            8887766 999999984              4678999999999999998886  578887654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.93  E-value=1.6e-08  Score=93.15  Aligned_cols=113  Identities=19%  Similarity=0.229  Sum_probs=80.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH----Hhhhhc----------CCc
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME----LVDAAF----------PLL   66 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d----l~~~~~----------~~~   66 (332)
                      |+++..||+||| +|.+|..+|..++..|.       +++|+|+++  +.++.....    +.....          ...
T Consensus         1 ~~~~~~~V~ViG-aG~mG~~iA~~~a~~G~-------~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~   70 (286)
T PRK07819          1 MSDAIQRVGVVG-AGQMGAGIAEVCARAGV-------DVLVFETTE--ELATAGRNRIEKSLERAVSRGKLTERERDAAL   70 (286)
T ss_pred             CCCCccEEEEEc-ccHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHHHHHHHHHHHhcccCChhhHHHHH
Confidence            777777999999 69999999999998774       899999985  333221111    111110          012


Q ss_pred             cceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCcccchHHH
Q 020022           67 KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALI  140 (332)
Q Consensus        67 ~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~  140 (332)
                      .+++.+++. +++++||+||.+.              .++.++.+++...++++| +|++  |++||...+....
T Consensus        71 ~~l~~~~~~-~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~~--il~snTS~~~~~~  128 (286)
T PRK07819         71 ARLRFTTDL-GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPDA--VLASNTSSIPIMK  128 (286)
T ss_pred             hCeEeeCCH-HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHH
Confidence            466677776 7799999999984              467888999999999998 7775  5677766644333

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.91  E-value=4.2e-08  Score=91.35  Aligned_cols=149  Identities=11%  Similarity=0.043  Sum_probs=97.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH----HHhhhh------cCCccceEeeCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM----ELVDAA------FPLLKGVVATTD   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~----dl~~~~------~~~~~~~~~~~~   74 (332)
                      .+||+||| +|.||+.+|..++..|.       +++|+|+++  +.+.....    .+....      .....+++.+++
T Consensus         7 i~~VaVIG-aG~MG~giA~~~a~aG~-------~V~l~D~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~   76 (321)
T PRK07066          7 IKTFAAIG-SGVIGSGWVARALAHGL-------DVVAWDPAP--GAEAALRANVANAWPALERQGLAPGASPARLRFVAT   76 (321)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCC
Confidence            46899999 69999999999998875       899999985  22221111    111110      011245677778


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC-------
Q 020022           75 AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS-------  147 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~-------  147 (332)
                      .++++++||+||.+.              .+|.++.+++...+.++++|++  |+.||.+.+...-++.....       
T Consensus        77 l~~av~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s~la~~~~~p~R~~g~  140 (321)
T PRK07066         77 IEACVADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPTDFYARATHPERCVVG  140 (321)
T ss_pred             HHHHhcCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHHHHHHhcCCcccEEEE
Confidence            889999999999983              4678889999999999998876  67888877644433322211       


Q ss_pred             --C-CCCc-----EE--EechHHHHHHHHHHHHHcCCCCCCe
Q 020022          148 --I-PAKN-----IT--CLTRLDHNRALGQISEKLNVQVSDV  179 (332)
Q Consensus       148 --~-~~~~-----i~--~~t~lds~r~~~~la~~l~v~~~~v  179 (332)
                        + |+..     +.  ..|.-++......+.+.+|..|--+
T Consensus       141 HffnP~~~~pLVEVv~g~~T~~e~~~~~~~f~~~lGk~pV~v  182 (321)
T PRK07066        141 HPFNPVYLLPLVEVLGGERTAPEAVDAAMGIYRALGMRPLHV  182 (321)
T ss_pred             ecCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCEeEec
Confidence              1 3221     22  2355666554555667788766444

>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]

Probab=98.84  E-value=2.7e-08  Score=91.37  Aligned_cols=168  Identities=22%  Similarity=0.249  Sum_probs=106.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hh--HH-HHhhhhc----------CCccce
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GV--KM-ELVDAAF----------PLLKGV   69 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~--~~-dl~~~~~----------~~~~~~   69 (332)
                      ..+||+||| +|.||+.+|..++..|+       +|+|+|+++  +.++ +.  .. -+.....          ....++
T Consensus         2 ~i~kv~ViG-aG~MG~gIA~~~A~~G~-------~V~l~D~~~--~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i   71 (307)
T COG1250           2 EIKKVAVIG-AGVMGAGIAAVFALAGY-------DVVLKDISP--EALERALAYIEKNLEKLVEKGKLTEEEADAALARI   71 (307)
T ss_pred             CccEEEEEc-ccchhHHHHHHHhhcCC-------ceEEEeCCH--HHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhc
Confidence            456999999 69999999999998654       799999984  2222 11  11 1111110          012345


Q ss_pred             EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C-
Q 020022           70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P-  146 (332)
Q Consensus        70 ~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~-  146 (332)
                      +.+++. .++++||+||.++              .+|.++.+++..++.++++|++  |+.||.+.+ ++.++.... + 
T Consensus        72 ~~~~~~-~~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~a--IlASNTSsl~it~ia~~~~rpe  134 (307)
T COG1250          72 TPTTDL-AALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDA--ILASNTSSLSITELAEALKRPE  134 (307)
T ss_pred             cccCch-hHhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCc--EEeeccCCCCHHHHHHHhCCch
Confidence            555544 4899999999983              6799999999999999998887  679998875 444444321 1 


Q ss_pred             ---C---C-CCC------cE-EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC-ceeecCCcee
Q 020022          147 ---S---I-PAK------NI-TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHAT  200 (332)
Q Consensus       147 ---~---~-~~~------~i-~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~-~~v~~~S~~~  200 (332)
                         |   | |+.      .+ +-.|.-++......+++++|..|--++..+  |...+ -..|+|..+.
T Consensus       135 r~iG~HFfNP~~~m~LVEvI~g~~T~~e~~~~~~~~~~~igK~~vv~~D~p--GFi~NRil~~~~~eA~  201 (307)
T COG1250         135 RFIGLHFFNPVPLMPLVEVIRGEKTSDETVERVVEFAKKIGKTPVVVKDVP--GFIVNRLLAALLNEAI  201 (307)
T ss_pred             hEEEEeccCCCCcceeEEEecCCCCCHHHHHHHHHHHHHcCCCCEeecCCC--ceehHhHHHHHHHHHH
Confidence               1   1 222      12 223666777778888888886542222222  43333 2335555554

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=98.83  E-value=1.2e-07  Score=88.73  Aligned_cols=117  Identities=20%  Similarity=0.216  Sum_probs=84.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--------------CccceEe
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--------------LLKGVVA   71 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--------------~~~~~~~   71 (332)
                      |||+|+| +|.||...+..|++.|-       +++++|+++  ++.+    -|.+...|              ...+++.
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GH-------eVv~vDid~--~KV~----~ln~g~~PI~EpgLe~ll~~~~~~gRl~f   66 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGH-------EVVCVDIDE--SKVE----LLNKGISPIYEPGLEELLKENLASGRLRF   66 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCC-------eEEEEeCCH--HHHH----HHhCCCCCCcCccHHHHHHhccccCcEEE
Confidence            6999999 89999999999998762       899999985  3332    22222222              1235899


Q ss_pred             eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccchHHHHH
Q 020022           72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTNALILK  142 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~~~~~~~  142 (332)
                      +++.++|++++|+++++.|.|.++..+      .++..+...++.|.++-+..++|++- |-|+.....+-.
T Consensus        67 Ttd~~~a~~~adv~fIavgTP~~~dg~------aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~~  132 (414)
T COG1004          67 TTDYEEAVKDADVVFIAVGTPPDEDGS------ADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVRA  132 (414)
T ss_pred             EcCHHHHHhcCCEEEEEcCCCCCCCCC------ccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHHHH
Confidence            999999999999999999999876432      35677778888888877543444443 568876555444

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=98.83  E-value=3e-08  Score=91.34  Aligned_cols=171  Identities=16%  Similarity=0.115  Sum_probs=107.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc---CCccceEeeCChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~---~~~~~~~~~~~~~~al~   80 (332)
                      ..++|+|+||+||||++++..|++.|.       +|+-.=+++..++-.....+|.....   .+...+.......+|++
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY-------~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGY-------TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCC-------EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh
Confidence            568999999999999999999999885       45544444321111112333432211   11233444455778999


Q ss_pred             CCcEEEEeCCCCCCCCC-CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh--C--------CCCC
Q 020022           81 GVNIAVMVGGFPRKEGM-ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF--A--------PSIP  149 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~-~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~--~--------~~~~  149 (332)
                      |||.|+|+|....-... ...+++.-.++...++.+.+.++.  ..+-+++|+....   +.+.-  .        +.+.
T Consensus        78 gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~--sVkrvV~TSS~aA---v~~~~~~~~~~~vvdE~~ws  152 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK--SVKRVVYTSSTAA---VRYNGPNIGENSVVDEESWS  152 (327)
T ss_pred             CCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC--CcceEEEeccHHH---hccCCcCCCCCcccccccCC
Confidence            99999999875432222 234788899999999999999985  3566677765432   22110  0        0011


Q ss_pred             C------Cc-EEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe
Q 020022          150 A------KN-ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG  186 (332)
Q Consensus       150 ~------~~-i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G  186 (332)
                      .      ++ -+.++..-..+..+.+|++-+++-.-+....|+|
T Consensus       153 d~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~G  196 (327)
T KOG1502|consen  153 DLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFG  196 (327)
T ss_pred             cHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceEC
Confidence            0      11 2445666667888888888887766666555555

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=98.75  E-value=7.4e-08  Score=82.91  Aligned_cols=119  Identities=22%  Similarity=0.307  Sum_probs=74.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--------------ccceEe
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------LKGVVA   71 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--------------~~~~~~   71 (332)
                      |||+|+| .|++|..+|..|+..|.       ++..+|+++  ++.+    .+.+...+.              ..+++.
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~-------~V~g~D~~~--~~v~----~l~~g~~p~~E~~l~~ll~~~~~~~~l~~   66 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGH-------QVIGVDIDE--EKVE----ALNNGELPIYEPGLDELLKENVSAGRLRA   66 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTS-------EEEEE-S-H--HHHH----HHHTTSSSS-CTTHHHHHHHHHHTTSEEE
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCC-------EEEEEeCCh--HHHH----HHhhccccccccchhhhhccccccccchh
Confidence            6999999 89999999999999874       899999985  3332    233222211              357888


Q ss_pred             eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-CcccchH----HHHHHh
Q 020022           72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANTNA----LILKEF  144 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~~~----~~~~~~  144 (332)
                      +++..+++++||++|++.+.|...+.+      -+...+.+.++.|.++..++..|++-| -|.....    .++.+.
T Consensus        67 t~~~~~ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~  138 (185)
T PF03721_consen   67 TTDIEEAIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKR  138 (185)
T ss_dssp             ESEHHHHHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhh
Confidence            888899999999999999988765432      234555666667766665555555544 4776544    455554

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]

Probab=98.74  E-value=1.8e-08  Score=86.95  Aligned_cols=151  Identities=16%  Similarity=0.203  Sum_probs=101.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh---hHHHHhhhhc------C---------Cc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG---VKMELVDAAF------P---------LL   66 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~---~~~dl~~~~~------~---------~~   66 (332)
                      .+.|+|+| +|.+|+.+|...+..|+       .+.|+|.+++ ...++   ....+.+.+.      +         ..
T Consensus        11 ~~~V~ivG-aG~MGSGIAQv~a~sg~-------~V~l~d~~~~-aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l   81 (298)
T KOG2304|consen   11 IKNVAIVG-AGQMGSGIAQVAATSGL-------NVWLVDANED-ALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTL   81 (298)
T ss_pred             ccceEEEc-ccccchhHHHHHHhcCC-------ceEEecCCHH-HHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHH
Confidence            46899999 69999999999998875       7999999862 22222   2222322221      0         12


Q ss_pred             cceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC
Q 020022           67 KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA  145 (332)
Q Consensus        67 ~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~  145 (332)
                      .++..+++...++.+||+||.+              ..+|+++.+++.+.+++.|++++  |+.||...+ ++.++... 
T Consensus        82 ~ri~~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~--il~tNTSSl~lt~ia~~~-  144 (298)
T KOG2304|consen   82 DRIKTSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSST--ILATNTSSLSLTDIASAT-  144 (298)
T ss_pred             HHHHHcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccce--EEeecccceeHHHHHhhc-
Confidence            4566778888999999998766              57899999999999999998775  678998764 45544322 


Q ss_pred             CCCCCCcEEE-------------------echHHHHHHHHHHHHHcCCCCCCeeeeE
Q 020022          146 PSIPAKNITC-------------------LTRLDHNRALGQISEKLNVQVSDVKNVI  183 (332)
Q Consensus       146 ~~~~~~~i~~-------------------~t~lds~r~~~~la~~l~v~~~~v~~~~  183 (332)
                      .  .+.+|+|                   -|.-++-.+..-+++.+|..+-.++..+
T Consensus       145 ~--~~srf~GlHFfNPvPvMKLvEVir~~~TS~eTf~~l~~f~k~~gKttVackDtp  199 (298)
T KOG2304|consen  145 Q--RPSRFAGLHFFNPVPVMKLVEVIRTDDTSDETFNALVDFGKAVGKTTVACKDTP  199 (298)
T ss_pred             c--ChhhhceeeccCCchhHHHhhhhcCCCCCHHHHHHHHHHHHHhCCCceeecCCC
Confidence            1  1122222                   2444555556666777777666666555

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.74  E-value=1.5e-07  Score=91.68  Aligned_cols=166  Identities=14%  Similarity=0.049  Sum_probs=103.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC-hhhhcC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD-AVEACT   80 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~-~~~al~   80 (332)
                      .++|||.|+||+||||++++..|+..|.       +|+.+|+... ....    .+.+.. . ...+.. ..| ...++.
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~-------~V~~ldr~~~-~~~~----~~~~~~-~-~~~~~~~~~Di~~~~~~  183 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGD-------EVIVIDNFFT-GRKE----NLVHLF-G-NPRFELIRHDVVEPILL  183 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCC-ccHh----Hhhhhc-c-CCceEEEECcccccccc
Confidence            3468999999999999999999998763       7999997521 1110    111110 0 011111 112 234577


Q ss_pred             CCcEEEEeCCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH------HHHhC-C--C-C
Q 020022           81 GVNIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI------LKEFA-P--S-I  148 (332)
Q Consensus        81 ~aDiVi~~ag~~~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~------~~~~~-~--~-~  148 (332)
                      ++|+|||+|+...  ....+..+.+..|+....++++.+++..   +++|++|.-. +  |-      ..+.. .  . .
T Consensus       184 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g---~r~V~~SS~~-V--Yg~~~~~p~~E~~~~~~~p~  257 (436)
T PLN02166        184 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG---ARFLLTSTSE-V--YGDPLEHPQKETYWGNVNPI  257 (436)
T ss_pred             CCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECcHH-H--hCCCCCCCCCccccccCCCC
Confidence            9999999997532  2223556778899999999999998874   3566665421 1  10      00000 0  0 1


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      .+...++.++....++....++..+++..-++...|+|.+
T Consensus       258 ~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~  297 (436)
T PLN02166        258 GERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPR  297 (436)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCC
Confidence            1223577788888787777777778887777777778864

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.72  E-value=1.6e-07  Score=88.90  Aligned_cols=173  Identities=14%  Similarity=0.075  Sum_probs=106.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh-hhhcCCccceEe-------eCCh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV-DAAFPLLKGVVA-------TTDA   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~-~~~~~~~~~~~~-------~~~~   75 (332)
                      .++||.|+||+||+|++++..|+..+.       +|+.+|+... .... ...++. ........++..       ...+
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~-------~V~~~d~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l   84 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQ-------TVIGLDNFST-GYQH-NLDDVRTSVSEEQWSRFIFIQGDIRKFTDC   84 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCC-cchh-hhhhhhhccccccCCceEEEEccCCCHHHH
Confidence            357999999999999999999998763       7889987531 1000 000110 000000011111       1123


Q ss_pred             hhhcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCC
Q 020022           76 VEACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIP  149 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~  149 (332)
                      .+.++++|+|||+|+....+  ..+..+....|+....++.+.+++...+  .+|++|.. .+...    ...+..+ ..
T Consensus        85 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~--~~v~~SS~-~vyg~~~~~~~~e~~~-~~  160 (348)
T PRK15181         85 QKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS--SFTYAASS-STYGDHPDLPKIEERI-GR  160 (348)
T ss_pred             HHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC--eEEEeech-HhhCCCCCCCCCCCCC-CC
Confidence            45578999999999864322  2344567889999999999999887533  46655532 11000    0001001 12


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      +...++.+.+...++...+++..+++...++...|+|.+.
T Consensus       161 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~  200 (348)
T PRK15181        161 PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ  200 (348)
T ss_pred             CCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence            3346788888888877777888899999999888889753

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.70  E-value=2.3e-07  Score=85.52  Aligned_cols=107  Identities=22%  Similarity=0.249  Sum_probs=73.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHH---hhh-----hcC-------Cccc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL---VDA-----AFP-------LLKG   68 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl---~~~-----~~~-------~~~~   68 (332)
                      ..+||+|+| +|.+|+.+|..++..|.       +|+++|+++  +.++.....+   .+.     ...       ...+
T Consensus         2 ~~~kIaViG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (287)
T PRK08293          2 DIKNVTVAG-AGVLGSQIAFQTAFHGF-------DVTIYDISD--EALEKAKERIAKLADRYVRDLEATKEAPAEAALNR   71 (287)
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcC
Confidence            346999999 69999999999998763       799999985  3332111111   110     000       1236


Q ss_pred             eEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           69 VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        69 ~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      ++.+++..+++++||+||.+.              ..+.+..+++.+.+.+++++++  |+++|.+..
T Consensus        72 i~~~~d~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~--ii~sntSt~  123 (287)
T PRK08293         72 ITLTTDLAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKT--IFATNSSTL  123 (287)
T ss_pred             eEEeCCHHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCC--EEEECcccC
Confidence            677788888899999999984              2456777888888988887765  345666554

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=98.70  E-value=2.4e-07  Score=95.44  Aligned_cols=156  Identities=20%  Similarity=0.222  Sum_probs=102.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hh--H-HHHhhhh----c------CCccceEe
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GV--K-MELVDAA----F------PLLKGVVA   71 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~--~-~dl~~~~----~------~~~~~~~~   71 (332)
                      .||+||| +|.||..+|..++..|+       +++|+|+++  +.++ +.  . ..+....    .      ....+++.
T Consensus       314 ~~v~ViG-aG~mG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~  383 (715)
T PRK11730        314 KQAAVLG-AGIMGGGIAYQSASKGV-------PVIMKDINQ--KALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRP  383 (715)
T ss_pred             ceEEEEC-CchhHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE
Confidence            6899999 69999999999998875       799999985  3332 11  1 1111100    0      01246777


Q ss_pred             eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C---
Q 020022           72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P---  146 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~---  146 (332)
                      +++. +++++||+||.+.              .+++++.+++...++++|+|++  |+.||.+.+ ++.++.... +   
T Consensus       384 ~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la~~~~~p~r~  446 (715)
T PRK11730        384 TLDY-AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDT--ILASNTSTISISLLAKALKRPENF  446 (715)
T ss_pred             eCCH-HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHHhhcCCCccE
Confidence            7765 7799999999983              5688999999999999998875  679998875 444444321 0   


Q ss_pred             -C---C-CCC--c---E--EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC
Q 020022          147 -S---I-PAK--N---I--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS  190 (332)
Q Consensus       147 -~---~-~~~--~---i--~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~  190 (332)
                       |   + |+.  +   |  +..|.-++......+++.+|..|--++..+  |...+
T Consensus       447 ~g~Hff~P~~~~~lVEvv~g~~T~~~~~~~~~~~~~~lgk~pv~v~d~p--Gfv~n  500 (715)
T PRK11730        447 CGMHFFNPVHRMPLVEVIRGEKTSDETIATVVAYASKMGKTPIVVNDCP--GFFVN  500 (715)
T ss_pred             EEEecCCcccccceEEeeCCCCCCHHHHHHHHHHHHHhCCceEEecCcC--chhHH
Confidence             0   1 222  1   1  223555665555566788887766655443  54443

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=98.67  E-value=3.6e-07  Score=93.93  Aligned_cols=151  Identities=17%  Similarity=0.198  Sum_probs=98.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhH----HHHhhhhc----------CCccce
Q 020022            5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVK----MELVDAAF----------PLLKGV   69 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~----~dl~~~~~----------~~~~~~   69 (332)
                      .+||+||| +|.||+.+|..++. .|+       +|+|+|+++  +.+..-.    ..+.....          ....++
T Consensus       304 i~~v~ViG-aG~mG~~iA~~~a~~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i  373 (699)
T TIGR02440       304 IKKVGILG-GGLMGGGIASVTATKAGI-------PVRIKDINP--QGINNALKYAWKLLDKGVKRRHMTPAERDNQMALI  373 (699)
T ss_pred             ccEEEEEC-CcHHHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCe
Confidence            36899999 69999999998874 664       799999985  3332111    11111100          012467


Q ss_pred             EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C-
Q 020022           70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P-  146 (332)
Q Consensus        70 ~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~-  146 (332)
                      +.+++. +++++||+||.+.              .+++++.+++..+++++|+|++  |+.||.+.+ ++.++.... + 
T Consensus       374 ~~~~~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~l~i~~la~~~~~p~  436 (699)
T TIGR02440       374 TGTTDY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHT--IFASNTSSLPIGQIAAAASRPE  436 (699)
T ss_pred             EEeCCh-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCc--EEEeCCCCCCHHHHHHhcCCcc
Confidence            777765 6899999999983              4678999999999999998875  678998775 444444321 1 


Q ss_pred             ---C---C-CCC--c---E--EEechHHHHHHHHHHHHHcCCCCCCeeee
Q 020022          147 ---S---I-PAK--N---I--TCLTRLDHNRALGQISEKLNVQVSDVKNV  182 (332)
Q Consensus       147 ---~---~-~~~--~---i--~~~t~lds~r~~~~la~~l~v~~~~v~~~  182 (332)
                         |   + |+.  +   |  +..|.-++......+.+.+|..|--|+..
T Consensus       437 r~~g~HffnP~~~~~lVEvv~g~~T~~~~~~~~~~~~~~~gk~pv~v~d~  486 (699)
T TIGR02440       437 NVIGLHYFSPVEKMPLVEVIPHAGTSEQTIATTVALAKKQGKTPIVVADK  486 (699)
T ss_pred             cEEEEecCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEccc
Confidence               0   1 322  1   2  22366666555566778888776655433

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=98.65  E-value=2.3e-07  Score=95.73  Aligned_cols=149  Identities=19%  Similarity=0.225  Sum_probs=99.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hh--HH-HHhhhhc----------CCccceE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GV--KM-ELVDAAF----------PLLKGVV   70 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~--~~-dl~~~~~----------~~~~~~~   70 (332)
                      ..||+||| +|.||+.++..++..|+       +|+|+|+++  +.+. +.  .. .+.....          ....+++
T Consensus       335 i~~v~ViG-aG~MG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~  404 (737)
T TIGR02441       335 VKTLAVLG-AGLMGAGIAQVSVDKGL-------KTVLKDATP--AGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLT  404 (737)
T ss_pred             ccEEEEEC-CCHhHHHHHHHHHhCCC-------cEEEecCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE
Confidence            36899999 69999999999998875       799999985  3332 11  11 1111100          0124677


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C--
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P--  146 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~--  146 (332)
                      .+++. +++++||+||.+.              .+|.++.+++...++++|+|++  |+.||.+.+ ++.++.... +  
T Consensus       405 ~~~~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la~~~~~p~r  467 (737)
T TIGR02441       405 PTLDY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHC--IIASNTSALPIKDIAAVSSRPEK  467 (737)
T ss_pred             EeCCH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHHhhcCCccc
Confidence            77765 6899999999883              5789999999999999998886  568998775 344444321 0  


Q ss_pred             --C---C-CCC--c---E--EEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 --S---I-PAK--N---I--TCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 --~---~-~~~--~---i--~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        |   + |+.  +   |  +..|.-++......+++.+|..|--++
T Consensus       468 ~ig~Hff~P~~~m~LvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v~  514 (737)
T TIGR02441       468 VIGMHYFSPVDKMQLLEIITHDGTSKDTLASAVAVGLKQGKVVIVVK  514 (737)
T ss_pred             eEEEeccCCcccCceEEEeCCCCCCHHHHHHHHHHHHHCCCeEEEEC
Confidence              1   1 322  1   2  224666665556677888887665444

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=98.64  E-value=3.6e-07  Score=94.18  Aligned_cols=151  Identities=17%  Similarity=0.236  Sum_probs=100.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHH-hcccCCCCCceEEEEEeCCCchhhhhhh---HHH-Hhhhhc----------CCccce
Q 020022            5 PVRVLVTGAAGQIGYALVPMIA-RGVMLGTDQPVILHMLDIPPAAEALNGV---KME-LVDAAF----------PLLKGV   69 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~l~~~---~~d-l~~~~~----------~~~~~~   69 (332)
                      .+||+||| +|.+|..+|..++ ..|+       +|+|+|+++  +.+..-   ..+ +.....          ....++
T Consensus       309 i~~v~ViG-aG~mG~giA~~~a~~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i  378 (708)
T PRK11154        309 VNKVGVLG-GGLMGGGIAYVTATKAGL-------PVRIKDINP--QGINHALKYSWDLLDKKVKRRHLKPSERDKQMALI  378 (708)
T ss_pred             ccEEEEEC-CchhhHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcE
Confidence            36999999 6999999999988 6664       799999985  323211   111 111000          112467


Q ss_pred             EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C-
Q 020022           70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P-  146 (332)
Q Consensus        70 ~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~-  146 (332)
                      +.+++. +++++||+||.+.              .+|.++.+++...++++++|++  |+.||.+.+ ++.++.... + 
T Consensus       379 ~~~~~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~--ilasnTS~l~i~~la~~~~~p~  441 (708)
T PRK11154        379 SGTTDY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHT--IFASNTSSLPIGQIAAAAARPE  441 (708)
T ss_pred             EEeCCh-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHHhcCccc
Confidence            787765 7899999999983              5789999999999999998886  568998775 444443321 1 


Q ss_pred             ---C---C-CCC--c---E--EEechHHHHHHHHHHHHHcCCCCCCeeee
Q 020022          147 ---S---I-PAK--N---I--TCLTRLDHNRALGQISEKLNVQVSDVKNV  182 (332)
Q Consensus       147 ---~---~-~~~--~---i--~~~t~lds~r~~~~la~~l~v~~~~v~~~  182 (332)
                         |   + |+.  +   |  +..|.-++......+.+.+|..|--++..
T Consensus       442 r~ig~Hff~P~~~~~lVEvv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~d~  491 (708)
T PRK11154        442 QVIGLHYFSPVEKMPLVEVIPHAKTSAETIATTVALAKKQGKTPIVVRDG  491 (708)
T ss_pred             ceEEEecCCccccCceEEEECCCCCCHHHHHHHHHHHHHcCCceEEEecc
Confidence               1   1 332  1   2  23466666666666778888876655433

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.64  E-value=4.5e-07  Score=88.57  Aligned_cols=165  Identities=14%  Similarity=0.048  Sum_probs=101.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC-hhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD-AVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~-~~~al~~   81 (332)
                      +.|||.|+||+||||++++..|+..|.       +|+.+|.... . .......  +...   .++.. ..| ...++.+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~-------~V~~ld~~~~-~-~~~~~~~--~~~~---~~~~~i~~D~~~~~l~~  183 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGD-------SVIVVDNFFT-G-RKENVMH--HFSN---PNFELIRHDVVEPILLE  183 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcC-------EEEEEeCCCc-c-chhhhhh--hccC---CceEEEECCccChhhcC
Confidence            458999999999999999999998763       7888886421 1 1111111  1100   11111 112 2345678


Q ss_pred             CcEEEEeCCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH------HHHhCCC-C-C--
Q 020022           82 VNIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI------LKEFAPS-I-P--  149 (332)
Q Consensus        82 aDiVi~~ag~~~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~------~~~~~~~-~-~--  149 (332)
                      +|+|||+|+...  ....+..+.+..|+....++.+.+++..   +++|++|.-.   .|-      ..+...+ . |  
T Consensus       184 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g---~r~V~~SS~~---VYg~~~~~p~~E~~~~~~~P~~  257 (442)
T PLN02206        184 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSE---VYGDPLQHPQVETYWGNVNPIG  257 (442)
T ss_pred             CCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECChH---HhCCCCCCCCCccccccCCCCC
Confidence            999999998542  1123456778899999999999988764   3566665421   110      0000000 0 1  


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      +...++.++....++...+.+..+++..-++...|+|.+
T Consensus       258 ~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~  296 (442)
T PLN02206        258 VRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPR  296 (442)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence            123566777777777666677778887777777778864

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.61  E-value=4.1e-08  Score=89.50  Aligned_cols=167  Identities=20%  Similarity=0.188  Sum_probs=94.1

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c--------CCccceEeeCChhhh
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F--------PLLKGVVATTDAVEA   78 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~--------~~~~~~~~~~~~~~a   78 (332)
                      |.||||+|++|+.++..|+..+-      -+|+++|+++  ..+.....++.... .        +...+++.......+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p------~~lil~d~~E--~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~   72 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGP------KKLILFDRDE--NKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRI   72 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-------SEEEEEES-H--HHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCC------CeEEEeCCCh--hHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHH
Confidence            78999999999999999998652      2799999985  45555555553211 0        011222222234567


Q ss_pred             cC--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEE
Q 020022           79 CT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT  154 (332)
Q Consensus        79 l~--~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~  154 (332)
                      ++  +.|+|+|+|....-+  .....+-+..|+--.+++++...++.. .-.|.+.|.-+             ..|.++.
T Consensus        73 ~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v-~~~v~ISTDKA-------------v~Ptnvm  138 (293)
T PF02719_consen   73 FEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGV-ERFVFISTDKA-------------VNPTNVM  138 (293)
T ss_dssp             TT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGC-------------SS--SHH
T ss_pred             HhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEcccccc-------------CCCCcHH
Confidence            77  899999999875422  235677889999999999999999874 33343333210             1223344


Q ss_pred             EechHHHHHHHHHHHHHc---CCCCCCeeeeEEEeccCCceeecCC
Q 020022          155 CLTRLDHNRALGQISEKL---NVQVSDVKNVIIWGNHSSSQYPDVN  197 (332)
Q Consensus       155 ~~t~lds~r~~~~la~~l---~v~~~~v~~~~v~G~hg~~~v~~~S  197 (332)
                      |.|..-..++-...++..   +.....|+.-+|+|..| |-+|.|-
T Consensus       139 GatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G-SVip~F~  183 (293)
T PF02719_consen  139 GATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG-SVIPLFK  183 (293)
T ss_dssp             HHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT-SCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC-cHHHHHH
Confidence            555555555555555444   22334455555555433 5556554

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.59  E-value=7.5e-07  Score=83.77  Aligned_cols=174  Identities=11%  Similarity=0.109  Sum_probs=103.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cCC----ccceEeeCChhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPL----LKGVVATTDAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~~----~~~~~~~~~~~~a   78 (332)
                      +++||.|+||+|++|++++..|+..|.       +|++++++..  ... ...++.... .+.    ..+++-.....++
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~-------~V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   77 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGY-------AVNTTVRDPE--NQK-KIAHLRALQELGDLKIFGADLTDEESFEAP   77 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCC-------EEEEEECCCC--CHH-HHHHHHhcCCCCceEEEEcCCCChHHHHHH
Confidence            457999999999999999999998763       6766666531  111 111111110 000    0111111234566


Q ss_pred             cCCCcEEEEeCCCCCCCCCC-HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH-------HHHHH-------
Q 020022           79 CTGVNIAVMVGGFPRKEGME-RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-------LILKE-------  143 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~-r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~-------~~~~~-------  143 (332)
                      ++++|+||++|+.......+ ..+++..|+.....+.+.+.+.... .++|++|.-...-.       ..+.+       
T Consensus        78 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~-~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~  156 (338)
T PLN00198         78 IAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSV-KRVILTSSAAAVSINKLSGTGLVMNEKNWTDVE  156 (338)
T ss_pred             HhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEeecceeeeccCCCCCCceeccccCCchh
Confidence            78999999999853222122 2346688999999999998876422 35666554211000       00000       


Q ss_pred             -hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          144 -FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       144 -~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                       .....++...++.++....++...+++..+++..-++...|+|.+
T Consensus       157 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        157 FLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS  202 (338)
T ss_pred             hhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence             000012334577788888888778888889888888878888864

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.59  E-value=1.6e-07  Score=86.28  Aligned_cols=115  Identities=20%  Similarity=0.247  Sum_probs=78.5

Q ss_pred             EEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhhcCCCcEEE
Q 020022            9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTGVNIAV   86 (332)
Q Consensus         9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~al~~aDiVi   86 (332)
                      .||||+||+|++++..|+..+-.     .+|+.+|+.+......    ++.....  .....++-..+..+|+++||+||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~-----~~Vr~~d~~~~~~~~~----~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~   71 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYI-----YEVRVLDRSPPPKFLK----DLQKSGVKEYIQGDITDPESLEEALEGVDVVF   71 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCc-----eEEEEcccccccccch----hhhcccceeEEEeccccHHHHHHHhcCCceEE
Confidence            48999999999999999987632     2799999875322111    1221110  11223334456789999999999


Q ss_pred             EeCCCCCCCC-CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           87 MVGGFPRKEG-MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        87 ~~ag~~~~~~-~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      |+|......+ .+.+.+...|+...+++.+...+...   +.+|+|..+.
T Consensus        72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~V---krlVytSS~~  118 (280)
T PF01073_consen   72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGV---KRLVYTSSIS  118 (280)
T ss_pred             EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCC---CEEEEEcCcc
Confidence            9998643333 45777889999999999999988753   3345554443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.57  E-value=3.4e-07  Score=87.42  Aligned_cols=173  Identities=14%  Similarity=0.127  Sum_probs=103.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ...|||+|+||+|++|++++..|+..|.       +|..+|+..+ ..+....  +.. . .....+.......++++++
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~-------~V~~v~r~~~-~~~~~~~--~~~-~-~~~~Dl~d~~~~~~~~~~~   86 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGH-------YIIASDWKKN-EHMSEDM--FCH-E-FHLVDLRVMENCLKVTKGV   86 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCC-------EEEEEEeccc-ccccccc--ccc-e-EEECCCCCHHHHHHHHhCC
Confidence            3468999999999999999999998763       7889987531 1111000  000 0 0000111111234557899


Q ss_pred             cEEEEeCCCCCCCC---CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch-HH------HHHHhCC-CCCCC
Q 020022           83 NIAVMVGGFPRKEG---MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN-AL------ILKEFAP-SIPAK  151 (332)
Q Consensus        83 DiVi~~ag~~~~~~---~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~-~~------~~~~~~~-~~~~~  151 (332)
                      |+||++|+.....+   ......+..|+....++++.+++... . ++|++|...-.- ..      -+.+-.+ ...+.
T Consensus        87 D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~v-k-~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~  164 (370)
T PLN02695         87 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGV-K-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ  164 (370)
T ss_pred             CEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCC-C-EEEEeCchhhcCCccccCcCCCcCcccCCCCCCC
Confidence            99999987532111   12234567899999999999887753 2 466665421000 00      0000000 12233


Q ss_pred             cEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      ..++.+.....++....++..+++..-++...|+|.++
T Consensus       165 s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~  202 (370)
T PLN02695        165 DAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG  202 (370)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence            46677788877777777888899888888888889765

>PLN02650 dihydroflavonol-4-reductase

Probab=98.56  E-value=1.1e-06  Score=83.19  Aligned_cols=177  Identities=15%  Similarity=0.118  Sum_probs=105.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-C----CccceEeeCC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-P----LLKGVVATTD   74 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~----~~~~~~~~~~   74 (332)
                      |-...++|.|+||+|++|++++..|+..|.       +|++++++.  +.+... .++.... . .    ...++.....
T Consensus         1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~-------~V~~~~r~~--~~~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~   70 (351)
T PLN02650          1 MGSQKETVCVTGASGFIGSWLVMRLLERGY-------TVRATVRDP--ANVKKV-KHLLDLPGATTRLTLWKADLAVEGS   70 (351)
T ss_pred             CCCCCCEEEEeCCcHHHHHHHHHHHHHCCC-------EEEEEEcCc--chhHHH-HHHHhccCCCCceEEEEecCCChhh
Confidence            545667999999999999999999998763       677777653  222111 1111100 0 0    0011111223


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCCCC-HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH-----HHHHHhCCC-
Q 020022           75 AVEACTGVNIAVMVGGFPRKEGME-RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-----LILKEFAPS-  147 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~~~-r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~-----~~~~~~~~~-  147 (332)
                      ..++++++|+|||+|+.......+ ..+.+..|+....++.+.+.+... -.++|++|.....-.     ....+.... 
T Consensus        71 ~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~  149 (351)
T PLN02650         71 FDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKT-VRRIVFTSSAGTVNVEEHQKPVYDEDCWSD  149 (351)
T ss_pred             HHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCC-ceEEEEecchhhcccCCCCCCccCcccCCc
Confidence            456788999999999754322212 235678899999999999887642 235666654311100     000000000 


Q ss_pred             -----CC--CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          148 -----IP--AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       148 -----~~--~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                           .+  +...++.+......+...+++..|++..-++...|+|..
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~  197 (351)
T PLN02650        150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPF  197 (351)
T ss_pred             hhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCC
Confidence                 00  112466777877777777888889888888877788864

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=98.56  E-value=5.9e-07  Score=92.51  Aligned_cols=157  Identities=20%  Similarity=0.240  Sum_probs=103.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hh--HHH-Hhhhhc----------CCccceE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GV--KME-LVDAAF----------PLLKGVV   70 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~--~~d-l~~~~~----------~~~~~~~   70 (332)
                      .+||+||| +|.||..+|..++..|+       +++|+|+++  +.+. +.  ... +.....          ....+++
T Consensus       313 i~~v~ViG-aG~mG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~  382 (714)
T TIGR02437       313 VKQAAVLG-AGIMGGGIAYQSASKGT-------PIVMKDINQ--HSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGIT  382 (714)
T ss_pred             cceEEEEC-CchHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeE
Confidence            46999999 69999999999998875       899999985  3332 11  111 111000          0124677


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C--
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P--  146 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~--  146 (332)
                      .+++. +++++||+||.+.              .+++++.+++..+++++|+|++  |+.||.+.+ ++.++.... +  
T Consensus       383 ~~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasnTS~l~i~~ia~~~~~p~r  445 (714)
T TIGR02437       383 PTLSY-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDA--ILASNTSTISISLLAKALKRPEN  445 (714)
T ss_pred             EeCCH-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHhhcCCccc
Confidence            77665 7799999999984              5688999999999999998886  679998875 444443321 0  


Q ss_pred             --C---C-CCCc-----E--EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC
Q 020022          147 --S---I-PAKN-----I--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS  190 (332)
Q Consensus       147 --~---~-~~~~-----i--~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~  190 (332)
                        |   | |+..     |  +..|.-++......+++.+|..|--++..+  |..++
T Consensus       446 ~ig~Hff~P~~~~~lvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v~d~p--Gfi~N  500 (714)
T TIGR02437       446 FCGMHFFNPVHRMPLVEVIRGEKSSDETIATVVAYASKMGKTPIVVNDCP--GFFVN  500 (714)
T ss_pred             EEEEecCCCcccCceEeecCCCCCCHHHHHHHHHHHHHcCCEEEEeCCcc--cchHH
Confidence              1   1 3221     2  224666665556667788887766555333  55444

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>PLN02427 UDP-apiose/xylose synthase

Probab=98.56  E-value=4.3e-07  Score=87.14  Aligned_cols=169  Identities=11%  Similarity=0.100  Sum_probs=99.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceE-------eeCCh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVV-------ATTDA   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~-------~~~~~   75 (332)
                      ++|||.||||+||+|++++..|+..+-      .+|+.+|++.  +...    .+..... ....+++       -....
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g------~~V~~l~r~~--~~~~----~l~~~~~~~~~~~~~~~~~Dl~d~~~l   80 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETP------HKVLALDVYN--DKIK----HLLEPDTVPWSGRIQFHRINIKHDSRL   80 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCC------CEEEEEecCc--hhhh----hhhccccccCCCCeEEEEcCCCChHHH
Confidence            468999999999999999999998631      1788888753  2211    1110000 0001111       11234


Q ss_pred             hhhcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCC---
Q 020022           76 VEACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAP---  146 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~---  146 (332)
                      .++++++|+|||+|+.....  ..+..+.+..|+....++.+..++..   .++|++|... +...    ...+-.+   
T Consensus        81 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS~~-vYg~~~~~~~~e~~p~~~  156 (386)
T PLN02427         81 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCE-VYGKTIGSFLPKDHPLRQ  156 (386)
T ss_pred             HHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEeeee-eeCCCcCCCCCccccccc
Confidence            56788999999999864321  12334556778888888888877654   3566666421 1000    0000000   


Q ss_pred             ---------C-----C----CCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          147 ---------S-----I----PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       147 ---------~-----~----~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                               .     +    .+...++.+.....++....++..+++..-++...|+|.+
T Consensus       157 ~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~  216 (386)
T PLN02427        157 DPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR  216 (386)
T ss_pred             ccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCC
Confidence                     0     0    0112456677777777766777778888888887788864

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.54  E-value=9.3e-07  Score=81.67  Aligned_cols=107  Identities=16%  Similarity=0.216  Sum_probs=68.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh----h----hhcC------Cccc
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV----D----AAFP------LLKG   68 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~----~----~~~~------~~~~   68 (332)
                      ++.+||+||| +|.+|..++..|+..|.       +|+++|+++  +.++.....+.    .    ...+      ...+
T Consensus         2 ~~~~kI~vIG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~   71 (292)
T PRK07530          2 MAIKKVGVIG-AGQMGNGIAHVCALAGY-------DVLLNDVSA--DRLEAGLATINGNLARQVAKGKISEEARAAALAR   71 (292)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhC
Confidence            3457999999 69999999999998764       799999985  33322111111    1    1000      0134


Q ss_pred             eEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           69 VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        69 ~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      ++.+++. +++++||+||.+.              ..+..+.+.+...+.+++++++++  +||.+.+
T Consensus        72 i~~~~~~-~~~~~aD~Vieav--------------pe~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~  122 (292)
T PRK07530         72 ISTATDL-EDLADCDLVIEAA--------------TEDETVKRKIFAQLCPVLKPEAIL--ATNTSSI  122 (292)
T ss_pred             eEeeCCH-HHhcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEcCCCC
Confidence            5666655 6789999999984              123345556667788888777643  4555543

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.54  E-value=1.2e-06  Score=80.42  Aligned_cols=111  Identities=22%  Similarity=0.329  Sum_probs=72.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhH------HHHhhhh-c------CCccceE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVK------MELVDAA-F------PLLKGVV   70 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~------~dl~~~~-~------~~~~~~~   70 (332)
                      .+||+||| +|.||..++..++..|.       +++++|+++  +.++ +..      ..+.+.. .      ....+++
T Consensus         3 ~~kI~VIG-~G~mG~~ia~~la~~g~-------~V~~~d~~~--~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~   72 (282)
T PRK05808          3 IQKIGVIG-AGTMGNGIAQVCAVAGY-------DVVMVDISD--AAVDRGLATITKSLDRLVKKGKMTEADKEAALARIT   72 (282)
T ss_pred             ccEEEEEc-cCHHHHHHHHHHHHCCC-------ceEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE
Confidence            34899999 69999999999998764       699999985  3332 110      0111000 0      0113566


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                      .+++. +++++||+||+++              ..+....+++.+.+.++++|+++  +.||...+....+.
T Consensus        73 ~~~~~-~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~i--l~s~ts~~~~~~la  127 (282)
T PRK05808         73 GTTDL-DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAI--LATNTSSLSITELA  127 (282)
T ss_pred             EeCCH-HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHHH
Confidence            66665 5689999999984              34567777888889999877763  36766654333333

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.52  E-value=1.4e-06  Score=80.51  Aligned_cols=105  Identities=16%  Similarity=0.255  Sum_probs=69.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH-------Hhhhhc--C--------Ccc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME-------LVDAAF--P--------LLK   67 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d-------l~~~~~--~--------~~~   67 (332)
                      ..||+|+| +|.+|..++..++..|.       +|+++|+++  +.++.....       +.....  .        ...
T Consensus         3 i~~I~ViG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~   72 (291)
T PRK06035          3 IKVIGVVG-SGVMGQGIAQVFARTGY-------DVTIVDVSE--EILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMA   72 (291)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHh
Confidence            46899999 69999999999998764       799999985  333211111       111000  0        012


Q ss_pred             ceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           68 GVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        68 ~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      ++..+++. +++++||+||.+.              ..+.++.+++.+.+.++++++++  ++||...+
T Consensus        73 ~i~~~~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~i--l~S~tsg~  124 (291)
T PRK06035         73 RIRTSTSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETI--IASNTSGI  124 (291)
T ss_pred             CcEeeCCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeE--EEEcCCCC
Confidence            34555555 6789999999984              23456667888888888877763  35665554

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=98.51  E-value=4.5e-07  Score=75.99  Aligned_cols=97  Identities=20%  Similarity=0.233  Sum_probs=65.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc------CCccceEeeCChhhhcC
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF------PLLKGVVATTDAVEACT   80 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~------~~~~~~~~~~~~~~al~   80 (332)
                      ||+|+| +|..|.++|..|...+.       ++.|+++++  +.++..  .-.+...      .+..++..++|++++++
T Consensus         1 KI~ViG-aG~~G~AlA~~la~~g~-------~V~l~~~~~--~~~~~i--~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~   68 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLADNGH-------EVTLWGRDE--EQIEEI--NETRQNPKYLPGIKLPENIKATTDLEEALE   68 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHCTE-------EEEEETSCH--HHHHHH--HHHTSETTTSTTSBEETTEEEESSHHHHHT
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCC-------EEEEEeccH--HHHHHH--HHhCCCCCCCCCcccCcccccccCHHHHhC
Confidence            899999 69999999999999873       899999974  333221  1112211      12357888999999999


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      +||+||++.  |              ....+++++.+..+-.++..+++++
T Consensus        69 ~ad~Iiiav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~~  103 (157)
T PF01210_consen   69 DADIIIIAV--P--------------SQAHREVLEQLAPYLKKGQIIISAT  103 (157)
T ss_dssp             T-SEEEE-S-----------------GGGHHHHHHHHTTTSHTT-EEEETS
T ss_pred             cccEEEecc--c--------------HHHHHHHHHHHhhccCCCCEEEEec
Confidence            999999983  1              2335677788888765555555443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=98.49  E-value=1.3e-06  Score=86.63  Aligned_cols=147  Identities=16%  Similarity=0.195  Sum_probs=89.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH---H-HHhhhhc----------CCccce
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK---M-ELVDAAF----------PLLKGV   69 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~---~-dl~~~~~----------~~~~~~   69 (332)
                      +..||+||| +|.||+.+|..++..|.       +++++|+++  +.++...   . .+.....          ....++
T Consensus         6 ~i~~V~VIG-aG~MG~gIA~~la~aG~-------~V~l~D~~~--e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i   75 (507)
T PRK08268          6 SIATVAVIG-AGAMGAGIAQVAAQAGH-------TVLLYDARA--GAAAAARDGIAARLAKLVEKGKLTAEQADAALARL   75 (507)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence            347999999 69999999999998774       899999985  3333211   1 1111000          012346


Q ss_pred             EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhCC--
Q 020022           70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFAP--  146 (332)
Q Consensus        70 ~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~~--  146 (332)
                      +.+++. +++++||+||.+.              .++.++.+.+...+.+.+++++  |+.||.+.+ .+.+......  
T Consensus        76 ~~~~~~-~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~a--ilasntStl~i~~la~~~~~p~  138 (507)
T PRK08268         76 RPVEAL-ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDC--ILATNTSSLSITAIAAALKHPE  138 (507)
T ss_pred             EEeCCH-HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHhhcCCcc
Confidence            666665 5688999999983              4567778888888999987776  445665543 2333332210  


Q ss_pred             ---C---C-CC--Cc---EEEe--chHHHHHHHHHHHHHcCCCCC
Q 020022          147 ---S---I-PA--KN---ITCL--TRLDHNRALGQISEKLNVQVS  177 (332)
Q Consensus       147 ---~---~-~~--~~---i~~~--t~lds~r~~~~la~~l~v~~~  177 (332)
                         |   + |.  .+   +.++  |.-++......+.+.+|..|-
T Consensus       139 r~~G~hff~Pa~v~~LvEvv~g~~Ts~~~~~~~~~l~~~lgk~pv  183 (507)
T PRK08268        139 RVAGLHFFNPVPLMKLVEVVSGLATDPAVADALYALARAWGKTPV  183 (507)
T ss_pred             cEEEEeecCCcccCeeEEEeCCCCCCHHHHHHHHHHHHHcCCceE
Confidence               1   1 11  12   2222  555554445566788886543

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=98.46  E-value=1.6e-06  Score=81.26  Aligned_cols=172  Identities=13%  Similarity=0.143  Sum_probs=100.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~a   82 (332)
                      +.++|.|+||+|++|++++..|+..+-.     .+|+++|++.  ........++..... ....++.-.....++++++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~-----~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~i   75 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNP-----KKIIIYSRDE--LKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGV   75 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCC-----cEEEEEcCCh--hHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcC
Confidence            3568999999999999999999876410     1688888763  111111111111000 0001111112345677889


Q ss_pred             cEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHH
Q 020022           83 NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLD  160 (332)
Q Consensus        83 DiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~ld  160 (332)
                      |+||++||....+  ..+..+.+..|+.....+.+.+.+...  .++|++|.-.            ...+...++.+...
T Consensus        76 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~--~~iV~~SS~~------------~~~p~~~Y~~sK~~  141 (324)
T TIGR03589        76 DYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGV--KRVVALSTDK------------AANPINLYGATKLA  141 (324)
T ss_pred             CEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEEeCCC------------CCCCCCHHHHHHHH
Confidence            9999999875322  234567889999999999999987652  3566665311            11112234555555


Q ss_pred             HHHHHHHHH---HHcCCCCCCeeeeEEEeccCCceeecCC
Q 020022          161 HNRALGQIS---EKLNVQVSDVKNVIIWGNHSSSQYPDVN  197 (332)
Q Consensus       161 s~r~~~~la---~~l~v~~~~v~~~~v~G~hg~~~v~~~S  197 (332)
                      ..++...++   +..|++...++...|.|..+ +.+|.|-
T Consensus       142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-~~i~~~~  180 (324)
T TIGR03589       142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-SVVPFFK  180 (324)
T ss_pred             HHHHHHHHHhhccccCcEEEEEeecceeCCCC-CcHHHHH
Confidence            555544433   34577777777666777533 3344433

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.46  E-value=2.1e-06  Score=79.19  Aligned_cols=104  Identities=19%  Similarity=0.317  Sum_probs=67.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh----hhh-c---------CCccceEe
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV----DAA-F---------PLLKGVVA   71 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~----~~~-~---------~~~~~~~~   71 (332)
                      .||+||| +|.+|..+|..|+..|.       +|+++|+++  +.++.....+.    ... .         ....+++.
T Consensus         2 ~~V~VIG-~G~mG~~iA~~la~~G~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~   71 (288)
T PRK09260          2 EKLVVVG-AGVMGRGIAYVFAVSGF-------QTTLVDIKQ--EQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY   71 (288)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhCCC-------cEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE
Confidence            5899999 69999999999998763       799999985  34432211111    110 0         01124666


Q ss_pred             eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      +++..+++++||+||.+..              .+..+.+.+...+.++++|+++  +++|...
T Consensus        72 ~~~~~~~~~~aD~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~i--l~~~tSt  119 (288)
T PRK09260         72 SLDLKAAVADADLVIEAVP--------------EKLELKKAVFETADAHAPAECY--IATNTST  119 (288)
T ss_pred             eCcHHHhhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCcE--EEEcCCC
Confidence            7777889999999999842              2345556666678888877753  3444433

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.45  E-value=1.6e-06  Score=80.05  Aligned_cols=167  Identities=17%  Similarity=0.173  Sum_probs=102.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC-cEE
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV-NIA   85 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a-DiV   85 (332)
                      +|.|+||+||+|++++..|++.|.       +|+.+|+....  .....   .+.... ...+.-.....++++++ |.|
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~---~~~~~~-~~d~~~~~~~~~~~~~~~d~v   68 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGH-------DVRGLDRLRDG--LDPLL---SGVEFV-VLDLTDRDLVDELAKGVPDAV   68 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCC-------eEEEEeCCCcc--ccccc---ccccee-eecccchHHHHHHHhcCCCEE
Confidence            499999999999999999998753       79999986421  11000   011100 00000112234556677 999


Q ss_pred             EEeCCCCCCCCCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH-H----HHHHh-CCCCCCCcEEEe
Q 020022           86 VMVGGFPRKEGMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-L----ILKEF-APSIPAKNITCL  156 (332)
Q Consensus        86 i~~ag~~~~~~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~-~----~~~~~-~~~~~~~~i~~~  156 (332)
                      |++|+....++..+   .++...|+...+++.+..++...  .+++..| .....- .    .+.+- .+-.|.. .++.
T Consensus        69 ih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~--~~~v~~s-s~~~~~~~~~~~~~~E~~~~~~p~~-~Yg~  144 (314)
T COG0451          69 IHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV--KRFVFAS-SVSVVYGDPPPLPIDEDLGPPRPLN-PYGV  144 (314)
T ss_pred             EEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC--CeEEEeC-CCceECCCCCCCCcccccCCCCCCC-HHHH
Confidence            99998765444322   35889999999999999998432  3454433 322111 0    11110 0111111 3677


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS  190 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~  190 (332)
                      +++...+.....++..+++..-++...|+|.+..
T Consensus       145 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~  178 (314)
T COG0451         145 SKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDK  178 (314)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence            8888888877777777899899987777886543

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=98.44  E-value=1.9e-06  Score=85.21  Aligned_cols=148  Identities=22%  Similarity=0.262  Sum_probs=93.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH----HHHhhhhc----------CCccceE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK----MELVDAAF----------PLLKGVV   70 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~----~dl~~~~~----------~~~~~~~   70 (332)
                      ..||+||| +|.||+.+|..++..|.       +++++|+++  +.++...    ..+.....          ....+++
T Consensus         5 ~~kV~VIG-aG~MG~gIA~~la~aG~-------~V~l~d~~~--e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~   74 (503)
T TIGR02279         5 VVTVAVIG-AGAMGAGIAQVAASAGH-------QVLLYDIRA--EALARAIAGIEARLNSLVTKGKLTAEECERTLKRLI   74 (503)
T ss_pred             ccEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccE
Confidence            46899999 69999999999998874       799999985  4443211    11111110          0123566


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch-HHHHHHhC-C--
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN-ALILKEFA-P--  146 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~-~~~~~~~~-~--  146 (332)
                      .+++. +++++||+||.+.              .++..+.+.+...+.++++|++  |+.||.+.+- +.++.... +  
T Consensus        75 ~~~~~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~~--IlasnTStl~i~~iA~~~~~p~r  137 (503)
T TIGR02279        75 PVTDL-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPADT--IIASNTSSLSITAIAAGLARPER  137 (503)
T ss_pred             EeCCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCe--EEEECCCCCCHHHHHHhcCcccc
Confidence            67665 6689999999983              4567888888888999997775  5678876643 33333321 0  


Q ss_pred             --C---C-CCC--c---EEEe--chHHHHHHHHHHHHHcCCCCCCe
Q 020022          147 --S---I-PAK--N---ITCL--TRLDHNRALGQISEKLNVQVSDV  179 (332)
Q Consensus       147 --~---~-~~~--~---i~~~--t~lds~r~~~~la~~l~v~~~~v  179 (332)
                        |   + |+.  +   +.++  |.-++......+.+.+|..|--+
T Consensus       138 ~~G~HFf~Papv~~LvEvv~g~~Ts~e~~~~~~~l~~~lgk~pv~v  183 (503)
T TIGR02279       138 VAGLHFFNPAPVMALVEVVSGLATAAEVAEQLYETALAWGKQPVHC  183 (503)
T ss_pred             eEEEeccCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeeeEe
Confidence              1   1 221  2   2233  45555555566678888654433

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=98.44  E-value=2.7e-06  Score=79.44  Aligned_cols=177  Identities=14%  Similarity=0.071  Sum_probs=105.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hc-C----CccceEeeCC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AF-P----LLKGVVATTD   74 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~-~----~~~~~~~~~~   74 (332)
                      |....++|.|+||+|++|++++..|+..|.       ++++.+++.  +..... ..+... .. .    ...++.-..+
T Consensus         1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~-------~V~~~~r~~--~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~   70 (325)
T PLN02989          1 MADGGKVVCVTGASGYIASWIVKLLLFRGY-------TINATVRDP--KDRKKT-DHLLALDGAKERLKLFKADLLDEGS   70 (325)
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEEcCC--cchhhH-HHHHhccCCCCceEEEeCCCCCchH
Confidence            666678999999999999999999998763       677776653  112111 111100 00 0    0011212223


Q ss_pred             hhhhcCCCcEEEEeCCCCCCC-C-CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH--------HHHHh
Q 020022           75 AVEACTGVNIAVMVGGFPRKE-G-MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL--------ILKEF  144 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~-~-~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~--------~~~~~  144 (332)
                      ..++++++|+||++||..... . ......+..|+.....+.+.+.++... .+||++|.-......        .+.+.
T Consensus        71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~-~~iv~~SS~~~~~~~~~~~~~~~~~~E~  149 (325)
T PLN02989         71 FELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSV-KRVILTSSMAAVLAPETKLGPNDVVDET  149 (325)
T ss_pred             HHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCc-eEEEEecchhheecCCccCCCCCccCcC
Confidence            456778899999999864321 1 223456788999999999988775322 356665542111000        00010


Q ss_pred             CCCCC-----CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          145 APSIP-----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       145 ~~~~~-----~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      .+.-|     +...++.++....++...+++..+++..-++...|+|..
T Consensus       150 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~  198 (325)
T PLN02989        150 FFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI  198 (325)
T ss_pred             CCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence            00001     123577788888888777788888887777877777853

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.44  E-value=3.7e-06  Score=78.34  Aligned_cols=106  Identities=14%  Similarity=0.251  Sum_probs=66.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh---c------CCccceEeeCCh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA---F------PLLKGVVATTDA   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~---~------~~~~~~~~~~~~   75 (332)
                      .+||+||| +|.+|..++..|+..|.       +|+++|+++  +.++.....+....   .      ....+++.+++.
T Consensus         4 ~~~I~vIG-aG~mG~~iA~~l~~~g~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   73 (311)
T PRK06130          4 IQNLAIIG-AGTMGSGIAALFARKGL-------QVVLIDVME--GALERARGVIERALGVYAPLGIASAGMGRIRMEAGL   73 (311)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCH--HHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCH
Confidence            46899999 69999999999988763       799999874  33332211111100   0      011235566677


Q ss_pred             hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      .+++++||+||++.-              ......+++...+..++++++  ++.||...+
T Consensus        74 ~~~~~~aDlVi~av~--------------~~~~~~~~v~~~l~~~~~~~~--ii~s~tsg~  118 (311)
T PRK06130         74 AAAVSGADLVIEAVP--------------EKLELKRDVFARLDGLCDPDT--IFATNTSGL  118 (311)
T ss_pred             HHHhccCCEEEEecc--------------CcHHHHHHHHHHHHHhCCCCc--EEEECCCCC
Confidence            778999999999841              223445566666777776654  344655543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.44  E-value=1.4e-06  Score=78.74  Aligned_cols=167  Identities=17%  Similarity=0.145  Sum_probs=108.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhc--CCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEAC--TGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al--~~a   82 (332)
                      |+|.|+||+|+|||+.+..|+..|.       +++.+|.-.+     +...-+...... ...++.-..-+.+.+  ..-
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~-------~vvV~DNL~~-----g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGH-------EVVVLDNLSN-----GHKIALLKLQFKFYEGDLLDRALLTAVFEENKI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCC-------eEEEEecCCC-----CCHHHhhhccCceEEeccccHHHHHHHHHhcCC
Confidence            5899999999999999999999774       8999997542     211111111000 001111111122222  367


Q ss_pred             cEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch----HHHHHHhCCCCCCCcEEEe
Q 020022           83 NIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN----ALILKEFAPSIPAKNITCL  156 (332)
Q Consensus        83 DiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~----~~~~~~~~~~~~~~~i~~~  156 (332)
                      |.|||.||...-+.  +...+++..|+--...+.+.+++++.+  .+ ++|..+.+-    +.-+.+-. -..|.+-+|-
T Consensus        69 daViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~--~~-vFSStAavYG~p~~~PI~E~~-~~~p~NPYG~  144 (329)
T COG1087          69 DAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK--KF-IFSSTAAVYGEPTTSPISETS-PLAPINPYGR  144 (329)
T ss_pred             CEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC--EE-EEecchhhcCCCCCcccCCCC-CCCCCCcchh
Confidence            99999998754322  456789999999999999999999853  23 444333210    00000100 1123456899


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      |++-+.++.+-+++..+....-.+.+++.|-|
T Consensus       145 sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~  176 (329)
T COG1087         145 SKLMSEEILRDAAKANPFKVVILRYFNVAGAC  176 (329)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEecccccCC
Confidence            99999999999999999888888888887765

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.42  E-value=2.9e-06  Score=80.17  Aligned_cols=173  Identities=12%  Similarity=0.055  Sum_probs=99.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cC-CccceEeeCChhhhcCC-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACTG-   81 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~-~~~~~~~~~~~~~al~~-   81 (332)
                      .++|.|+||+|++|++++..|++.|.       +|+.+|+++.  ........+.... .. ...++.-..+..+.+++ 
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGA-------EVYGYSLDPP--TSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF   74 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCC-------EEEEEeCCCc--cchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc
Confidence            46899999999999999999998763       6888887642  1111111111000 00 00111111123344554 


Q ss_pred             -CcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH----HHHHHhCCCCCCCcEE
Q 020022           82 -VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEFAPSIPAKNIT  154 (332)
Q Consensus        82 -aDiVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~----~~~~~~~~~~~~~~i~  154 (332)
                       .|+||++|+.+..  ...+....+..|+.....+.+.+.+.+. ..++|++|...-.-.    .-..+. +..++...+
T Consensus        75 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~iv~~SS~~vyg~~~~~~~~~e~-~~~~p~~~Y  152 (349)
T TIGR02622        75 KPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGS-VKAVVNVTSDKCYRNDEWVWGYRET-DPLGGHDPY  152 (349)
T ss_pred             CCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCC-CCEEEEEechhhhCCCCCCCCCccC-CCCCCCCcc
Confidence             5999999985432  1123456778899999999998876541 235666665210000    000000 112233457


Q ss_pred             EechHHHHHHHHHHHHHc-------CCCCCCeeeeEEEecc
Q 020022          155 CLTRLDHNRALGQISEKL-------NVQVSDVKNVIIWGNH  188 (332)
Q Consensus       155 ~~t~lds~r~~~~la~~l-------~v~~~~v~~~~v~G~h  188 (332)
                      +.++....++...+++.+       +++...++...|+|..
T Consensus       153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       153 SSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence            778877777776677655       6666677766667753

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=98.42  E-value=2.9e-06  Score=78.52  Aligned_cols=105  Identities=24%  Similarity=0.294  Sum_probs=67.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH-------HHhhhhc-------CCccceE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM-------ELVDAAF-------PLLKGVV   70 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~-------dl~~~~~-------~~~~~~~   70 (332)
                      .+||+||| +|.||+.++..|+..|.       +|+++|.++  +.++....       .+.+...       .....+.
T Consensus         4 ~~~V~vIG-~G~mG~~iA~~l~~~G~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   73 (295)
T PLN02545          4 IKKVGVVG-AGQMGSGIAQLAAAAGM-------DVWLLDSDP--AALSRGLDSISSSLARLVKKGKMSQEEADATLGRIR   73 (295)
T ss_pred             cCEEEEEC-CCHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceE
Confidence            46899999 69999999999998763       799999985  33321100       1111000       0012344


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      .+++ .+++++||+||.+.              .++.++.+.+...+.+++++++  |++||...+
T Consensus        74 ~~~~-~~~~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~--il~s~tS~i  122 (295)
T PLN02545         74 CTTN-LEELRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSA--ILASNTSSI  122 (295)
T ss_pred             eeCC-HHHhCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCc--EEEECCCCC
Confidence            4444 46789999999984              3345666677777888877776  345665554

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.42  E-value=2e-06  Score=84.12  Aligned_cols=178  Identities=12%  Similarity=0.173  Sum_probs=102.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch--h------hh---hhhHHHHh---hhh---cCC-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--E------AL---NGVKMELV---DAA---FPL-   65 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~--~------~l---~~~~~dl~---~~~---~~~-   65 (332)
                      +++||.||||+||+|++++..|+..|.       +|+++|.....  +      .+   ......+.   +..   ... 
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~-------~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v  118 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGY-------EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY  118 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence            357999999999999999999998763       78988843100  0      00   00000011   000   000 


Q ss_pred             ccceEeeCChhhhcC--CCcEEEEeCCCCCCC--CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc---
Q 020022           66 LKGVVATTDAVEACT--GVNIAVMVGGFPRKE--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN---  135 (332)
Q Consensus        66 ~~~~~~~~~~~~al~--~aDiVi~~ag~~~~~--~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~---  135 (332)
                      ...+.-.....++++  ++|+|||+|+....+  ..+   ....+..|+....++.+.+++++.+ .+++.+|...-   
T Consensus       119 ~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~-~~~V~~SS~~vYG~  197 (442)
T PLN02572        119 VGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPD-CHLVKLGTMGEYGT  197 (442)
T ss_pred             ECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCC-ccEEEEecceecCC
Confidence            011111112334555  489999998653221  111   1234578999999999999887632 35655442110   


Q ss_pred             ---chHH-HHH------HhCCC--CCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          136 ---TNAL-ILK------EFAPS--IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       136 ---~~~~-~~~------~~~~~--~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                         -+.. .+.      +....  ..+...++.+.+....+....++..|++..-++...|+|.+.
T Consensus       198 ~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~  263 (442)
T PLN02572        198 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT  263 (442)
T ss_pred             CCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence               0000 000      00000  122347889999888888888899999988888888889754

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.41  E-value=2.1e-06  Score=83.83  Aligned_cols=168  Identities=20%  Similarity=0.177  Sum_probs=109.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-----CCccceEeeCChhhhc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-----PLLKGVVATTDAVEAC   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-----~~~~~~~~~~~~~~al   79 (332)
                      .++|.|+||+|++|+.+...++..+.      -+|.++|.+|  -++.....++.+...     +....++-......++
T Consensus       250 gK~vLVTGagGSiGsel~~qil~~~p------~~i~l~~~~E--~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~  321 (588)
T COG1086         250 GKTVLVTGGGGSIGSELCRQILKFNP------KEIILFSRDE--YKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAM  321 (588)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHhcCC------CEEEEecCch--HHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHH
Confidence            47899999999999999999987642      2899999986  344444555554311     1112333333456788


Q ss_pred             CC--CcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec----CcccchHHHHHHhCCCCCCC
Q 020022           80 TG--VNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA----NPANTNALILKEFAPSIPAK  151 (332)
Q Consensus        80 ~~--aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t----NP~~~~~~~~~~~~~~~~~~  151 (332)
                      ++  .|+|+|+|....-|-  ....+-...|+--.+++++...+++-+ ..|.+.|    ||.+                
T Consensus       322 ~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~-~~V~iSTDKAV~PtN----------------  384 (588)
T COG1086         322 EGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVK-KFVLISTDKAVNPTN----------------  384 (588)
T ss_pred             hcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCC-EEEEEecCcccCCch----------------
Confidence            88  999999998766554  456778899999999999999998864 4444444    4444                


Q ss_pred             cEEEechHHHHHHHHHHHHHcC---CCCCCeeeeEEEeccCCceeecCCce
Q 020022          152 NITCLTRLDHNRALGQISEKLN---VQVSDVKNVIIWGNHSSSQYPDVNHA  199 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~---v~~~~v~~~~v~G~hg~~~v~~~S~~  199 (332)
                       +.|.|+.-+..+-...++..+   ....-|+.-+|+|.- .|.+|+|.+-
T Consensus       385 -vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-GSViPlFk~Q  433 (588)
T COG1086         385 -VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-GSVIPLFKKQ  433 (588)
T ss_pred             -HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-CCCHHHHHHH
Confidence             335455444444444433222   223344555566653 3778887543

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=98.38  E-value=4.8e-06  Score=82.53  Aligned_cols=107  Identities=15%  Similarity=0.173  Sum_probs=71.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHH-------hhh---hcCCccceEeeCCh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL-------VDA---AFPLLKGVVATTDA   75 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl-------~~~---~~~~~~~~~~~~~~   75 (332)
                      +||+||| +|.||+.++..|+..|.       +|+++|+++  +.++.....+       ...   ......+++.+++.
T Consensus         5 ~kIavIG-~G~MG~~iA~~la~~G~-------~V~v~D~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~   74 (495)
T PRK07531          5 MKAACIG-GGVIGGGWAARFLLAGI-------DVAVFDPHP--EAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASL   74 (495)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCH
Confidence            5899999 79999999999998774       799999985  3332211100       000   00011236677778


Q ss_pred             hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                      .+++++||+||.+.              ..+.++.+.+...+.++++|++  |+.||.+.+..
T Consensus        75 ~ea~~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~--iI~SsTsgi~~  121 (495)
T PRK07531         75 AEAVAGADWIQESV--------------PERLDLKRRVLAEIDAAARPDA--LIGSSTSGFLP  121 (495)
T ss_pred             HHHhcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCH
Confidence            88999999999873              2345666677777888887664  45677666433

>PLN02214 cinnamoyl-CoA reductase

Probab=98.38  E-value=5.5e-06  Score=78.23  Aligned_cols=170  Identities=15%  Similarity=0.103  Sum_probs=103.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhh--c-CCccceEeeCChhhhcC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAA--F-PLLKGVVATTDAVEACT   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~--~-~~~~~~~~~~~~~~al~   80 (332)
                      .++|.|+||+|++|++++..|+..|.       +|+.++++.+  ... .....+....  . ....++....+..++++
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   80 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGY-------TVKGTVRNPD--DPKNTHLRELEGGKERLILCKADLQDYEALKAAID   80 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCCch--hhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh
Confidence            46899999999999999999998763       6888877632  111 1111111100  0 00012222224567788


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH-------HHHHHhCC-C--CC-
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-------LILKEFAP-S--IP-  149 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~-------~~~~~~~~-~--~~-  149 (332)
                      ++|+||++|+...   ....+.+..|+.....+.+.+.+...  .++|++|.-..+-.       ..+.+-.. .  .+ 
T Consensus        81 ~~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v--~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~  155 (342)
T PLN02214         81 GCDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKV--KRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCK  155 (342)
T ss_pred             cCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCC--CEEEEeccceeeeccCCCCCCcccCcccCCChhhcc
Confidence            9999999998642   23466788899999999999988653  24655554211100       00000000 0  01 


Q ss_pred             -CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          150 -AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       150 -~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                       +...++.++....++...+++..+++..-++...|+|.+
T Consensus       156 ~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~  195 (342)
T PLN02214        156 NTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPP  195 (342)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence             112456677777777777778889888888888888864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.38  E-value=3.6e-06  Score=78.33  Aligned_cols=174  Identities=15%  Similarity=0.085  Sum_probs=99.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh--cC----CccceEeeCChh
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FP----LLKGVVATTDAV   76 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~--~~----~~~~~~~~~~~~   76 (332)
                      .+.+||.|+||+|++|++++..|+..|.       +|++++++..  ... ....+....  .+    ...++.-.....
T Consensus         2 ~~~~~ilVtGatGfIG~~l~~~L~~~g~-------~V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   71 (322)
T PLN02662          2 GEGKVVCVTGASGYIASWLVKLLLQRGY-------TVKATVRDPN--DPK-KTEHLLALDGAKERLHLFKANLLEEGSFD   71 (322)
T ss_pred             CCCCEEEEECChHHHHHHHHHHHHHCCC-------EEEEEEcCCC--chh-hHHHHHhccCCCCceEEEeccccCcchHH
Confidence            3457999999999999999999998763       6777776642  111 111111100  00    001222223356


Q ss_pred             hhcCCCcEEEEeCCCCCCCCCC-HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH---------HHHhCC
Q 020022           77 EACTGVNIAVMVGGFPRKEGME-RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI---------LKEFAP  146 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~~~~-r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~---------~~~~~~  146 (332)
                      ++++++|+|||+|+........ ..+.+..|+....++.+.+.+.... .++|++|.-.. ..|-         +.+-.+
T Consensus        72 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~-~~~v~~SS~~~-~~y~~~~~~~~~~~~E~~~  149 (322)
T PLN02662         72 SVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSV-KRVVVTSSMAA-VAYNGKPLTPDVVVDETWF  149 (322)
T ss_pred             HHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEccCHHH-hcCCCcCCCCCCcCCcccC
Confidence            7788999999999864322122 2367788999999999988776212 24655553111 0010         000000


Q ss_pred             CCCC-----CcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          147 SIPA-----KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       147 ~~~~-----~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      .-|.     ...++.+.....++...+++..+++..-++...++|..
T Consensus       150 ~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~  196 (322)
T PLN02662        150 SDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPL  196 (322)
T ss_pred             CChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCC
Confidence            0010     11355666666666666677778887777766667753

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.38  E-value=2.1e-06  Score=88.19  Aligned_cols=169  Identities=14%  Similarity=0.122  Sum_probs=104.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCC-hhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTD-AVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~-~~~al~   80 (332)
                      +.|||.|+||+||+|++++..|+.. +.       +|+.+|+...  ... ..  +.+..... ..++.-... ..++++
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-------~V~~l~r~~~--~~~-~~--~~~~~~~~~~gDl~d~~~~l~~~l~  381 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNY-------EVYGLDIGSD--AIS-RF--LGHPRFHFVEGDISIHSEWIEYHIK  381 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCc-------EEEEEeCCch--hhh-hh--cCCCceEEEeccccCcHHHHHHHhc
Confidence            3579999999999999999999874 32       7888997641  111 00  00000000 011111111 245688


Q ss_pred             CCcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCC---CC--
Q 020022           81 GVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPS---IP--  149 (332)
Q Consensus        81 ~aDiVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~---~~--  149 (332)
                      ++|+|||+|+....  ...+..+.+..|+....++.+.++++. +  ++|++|.. .+...    ...+-.+-   .|  
T Consensus       382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~--~~V~~SS~-~vyg~~~~~~~~E~~~~~~~~p~~  457 (660)
T PRK08125        382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K--RIIFPSTS-EVYGMCTDKYFDEDTSNLIVGPIN  457 (660)
T ss_pred             CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C--eEEEEcch-hhcCCCCCCCcCccccccccCCCC
Confidence            99999999886432  223456677889999999999999875 3  45555542 11000    00000000   01  


Q ss_pred             -CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          150 -AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       150 -~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                       +...++.+.....++...+++..+++...++...|+|..
T Consensus       458 ~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        458 KQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR  497 (660)
T ss_pred             CCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence             123678888888888888888889998888988888864

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=98.35  E-value=5.2e-06  Score=78.63  Aligned_cols=175  Identities=13%  Similarity=0.088  Sum_probs=98.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cC-CccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~-~~~~~~~~~~~~~al~~a   82 (332)
                      .|||.|+||+|++|++++..|+..|.       +|++.+++.  +.......++.... .. ...++.......++++++
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQRGY-------TVHATLRDP--AKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGC   80 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCC
Confidence            47999999999999999999998763       677777653  22211111111100 00 001111111234667889


Q ss_pred             cEEEEeCCCCCCC---C-CCHHHHH-----HhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH--------HHHHHhC
Q 020022           83 NIAVMVGGFPRKE---G-MERKDVM-----SKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA--------LILKEFA  145 (332)
Q Consensus        83 DiVi~~ag~~~~~---~-~~r~~~~-----~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~--------~~~~~~~  145 (332)
                      |+||++|+.....   . .+..+.+     ..|+.....+.+.+.++. .-.++|++|.-.-...        ..+.+..
T Consensus        81 d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~  159 (353)
T PLN02896         81 DGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKDSNGRWRAVVDETC  159 (353)
T ss_pred             CEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccccCCCCCCccCccc
Confidence            9999999864321   1 1222333     334577788888877653 1235666554211000        0000000


Q ss_pred             CC--------CCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          146 PS--------IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       146 ~~--------~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      ..        .++...++.+++...++...+++..+++..-++...|+|.+-
T Consensus       160 ~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~  211 (353)
T PLN02896        160 QTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFL  211 (353)
T ss_pred             CCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCc
Confidence            00        011125788888888888888888898888888777788643

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.34  E-value=3.2e-06  Score=79.87  Aligned_cols=166  Identities=10%  Similarity=0.069  Sum_probs=97.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcCC-ccceE-eeCChhhhcCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFPL-LKGVV-ATTDAVEACTG   81 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~~-~~~~~-~~~~~~~al~~   81 (332)
                      |||+|+||+|++|++++..|+.. +.       +|+.+|+..  +...    ++... .... ..++. ......+++++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~-------~V~~~~r~~--~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   68 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDW-------EVYGMDMQT--DRLG----DLVNHPRMHFFEGDITINKEWIEYHVKK   68 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCC-------eEEEEeCcH--HHHH----HhccCCCeEEEeCCCCCCHHHHHHHHcC
Confidence            58999999999999999999874 32       789998753  1111    11100 0000 01111 00123356789


Q ss_pred             CcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCC------C
Q 020022           82 VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSI------P  149 (332)
Q Consensus        82 aDiVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~------~  149 (332)
                      +|+|||+|+....  ...+.......|+...+++++.+++..   .++|.+|... +.-.    ...+-.+-+      +
T Consensus        69 ~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~---~~~v~~SS~~-vyg~~~~~~~~ee~~~~~~~~~~~  144 (347)
T PRK11908         69 CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSE-VYGMCPDEEFDPEASPLVYGPINK  144 (347)
T ss_pred             CCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC---CeEEEEecce-eeccCCCcCcCccccccccCcCCC
Confidence            9999999876422  223445566778888899999888753   3566665431 1000    000000000      1


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      +...++.+..........+++..+++..-++...++|.+
T Consensus       145 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~  183 (347)
T PRK11908        145 PRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPG  183 (347)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCC
Confidence            112466677777667666777789988888877778853

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=98.34  E-value=5.7e-06  Score=77.21  Aligned_cols=175  Identities=12%  Similarity=0.077  Sum_probs=100.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-C----CccceEeeCC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-P----LLKGVVATTD   74 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~----~~~~~~~~~~   74 (332)
                      |....++|.|+||+|++|++++..|+..|.       +|++..++..  ... ....+.... . .    ...++.-...
T Consensus         1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~   70 (322)
T PLN02986          1 MNGGGKLVCVTGASGYIASWIVKLLLLRGY-------TVKATVRDLT--DRK-KTEHLLALDGAKERLKLFKADLLEESS   70 (322)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCCc--chH-HHHHHHhccCCCCceEEEecCCCCcch
Confidence            655668999999999999999999998763       6765544421  111 111111100 0 0    0011212223


Q ss_pred             hhhhcCCCcEEEEeCCCCCCC-CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC------
Q 020022           75 AVEACTGVNIAVMVGGFPRKE-GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS------  147 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~-~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~------  147 (332)
                      ..++++++|+||++|+..... .....+++..|+.....+.+.+.+.. .-.+||++|.-.... +.-.....+      
T Consensus        71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~v~rvV~~SS~~~~~-~~~~~~~~~~~~~E~  148 (322)
T PLN02986         71 FEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETP-SVKRVILTSSTAAVL-FRQPPIEANDVVDET  148 (322)
T ss_pred             HHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcC-CccEEEEecchhhee-cCCccCCCCCCcCcc
Confidence            556788999999999864211 11223467789999999998887652 112465555322110 000000000      


Q ss_pred             -C--C-----CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          148 -I--P-----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       148 -~--~-----~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                       +  |     +...++.++....++.+.+++..+++...++...|+|.
T Consensus       149 ~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp  196 (322)
T PLN02986        149 FFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGP  196 (322)
T ss_pred             cCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCC
Confidence             0  1     12346777777777777777777888777777777775

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=98.30  E-value=9.6e-06  Score=71.72  Aligned_cols=103  Identities=14%  Similarity=0.122  Sum_probs=63.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~al~~aD   83 (332)
                      |||+||||+|.+|++++..|+..+.       +|.++++++  ++++....++.+...  ....++.. ++..++++++|
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~-------~V~v~~r~~--~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aD   70 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGN-------KIIIGSRDL--EKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRAD   70 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCC-------EEEEEEcCH--HHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCC
Confidence            5899998579999999999998762       789999874  444433333322111  11112222 35578899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      +||++.-.                ..+.++++.+.... ++..||-++||.+
T Consensus        71 vVilavp~----------------~~~~~~l~~l~~~l-~~~vvI~~~ngi~  105 (219)
T TIGR01915        71 VVILAVPW----------------DHVLKTLESLRDEL-SGKLVISPVVPLA  105 (219)
T ss_pred             EEEEECCH----------------HHHHHHHHHHHHhc-cCCEEEEeccCce
Confidence            99998521                11223334444333 2356777899975

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.27  E-value=5e-06  Score=77.58  Aligned_cols=109  Identities=12%  Similarity=0.049  Sum_probs=69.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al~~aDi   84 (332)
                      |||+|+||+|++|++++..|+..|.       +|+.++++.  +...    .+.+.... ...++.-...+.++++++|+
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~-------~V~~l~R~~--~~~~----~l~~~~v~~v~~Dl~d~~~l~~al~g~d~   67 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGY-------QVRCLVRNL--RKAS----FLKEWGAELVYGDLSLPETLPPSFKGVTA   67 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcCh--HHhh----hHhhcCCEEEECCCCCHHHHHHHHCCCCE
Confidence            4899999999999999999998763       788888763  2111    11111000 00111112245788999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ||++++....   +.......|....+++++.+++.+.+  ++|.+|.
T Consensus        68 Vi~~~~~~~~---~~~~~~~~~~~~~~~l~~aa~~~gvk--r~I~~Ss  110 (317)
T CHL00194         68 IIDASTSRPS---DLYNAKQIDWDGKLALIEAAKAAKIK--RFIFFSI  110 (317)
T ss_pred             EEECCCCCCC---CccchhhhhHHHHHHHHHHHHHcCCC--EEEEecc
Confidence            9998764321   12234567888888999988887643  5666553

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=98.26  E-value=3.8e-06  Score=79.18  Aligned_cols=163  Identities=10%  Similarity=-0.009  Sum_probs=90.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch---hhhhhhHHHHhh---hhcCC-ccceEeeCChhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA---EALNGVKMELVD---AAFPL-LKGVVATTDAVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~---~~l~~~~~dl~~---~~~~~-~~~~~~~~~~~~a   78 (332)
                      +||.|+||+|++|++++..|+..|.       +|+++|++...   +.+.....+...   ..... ..+++......++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~   73 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGY-------EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRI   73 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCC-------EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHH
Confidence            4899999999999999999998763       78999876421   111100000000   00000 0111111123455


Q ss_pred             cCC--CcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCC-CeEEEEecCcccchH---H-HHHHhCCCCC
Q 020022           79 CTG--VNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAP-NCKVLVVANPANTNA---L-ILKEFAPSIP  149 (332)
Q Consensus        79 l~~--aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~-~~~viv~tNP~~~~~---~-~~~~~~~~~~  149 (332)
                      +++  .|+|||+|+......  ......+..|+.....+.+.+.+++.+ ..+++++|.. .+--   . ...+- ..+.
T Consensus        74 ~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~-~vyg~~~~~~~~E~-~~~~  151 (343)
T TIGR01472        74 IDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTS-ELYGKVQEIPQNET-TPFY  151 (343)
T ss_pred             HHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccH-HhhCCCCCCCCCCC-CCCC
Confidence            664  599999998653221  123344566877888888888876422 2245555431 1100   0 00010 1123


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcCCCCC
Q 020022          150 AKNITCLTRLDHNRALGQISEKLNVQVS  177 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~v~~~  177 (332)
                      +...++.++....++...+++..+++..
T Consensus       152 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~  179 (343)
T TIGR01472       152 PRSPYAAAKLYAHWITVNYREAYGLFAV  179 (343)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCceE
Confidence            3446788888888888888888777543

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.26  E-value=7.9e-06  Score=76.01  Aligned_cols=167  Identities=17%  Similarity=0.124  Sum_probs=96.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |||.|+||+|++|++++..|+..+.       +++++|+++.  ...    ++.+... ....++.-..+..++++++|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~----~~~~~~~~~~~~D~~~~~~l~~~~~~~d~   67 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGE-------EVRVLVRPTS--DRR----NLEGLDVEIVEGDLRDPASLRKAVAGCRA   67 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCC-------EEEEEEecCc--ccc----ccccCCceEEEeeCCCHHHHHHHHhCCCE
Confidence            4899999999999999999998763       7899998642  111    1111000 000011111235567889999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH--H--HHHHhCCCCCCC--cEEEech
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA--L--ILKEFAPSIPAK--NITCLTR  158 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~--~--~~~~~~~~~~~~--~i~~~t~  158 (332)
                      ||++++.......+.......|+.....+++.+.+...  .++|+.|.....-.  .  ...+..+..+..  ..++.+.
T Consensus        68 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  145 (328)
T TIGR03466        68 LFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGV--ERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSK  145 (328)
T ss_pred             EEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHH
Confidence            99998754333345567788899999999998887653  24666654221000  0  000000000111  1234455


Q ss_pred             HHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          159 LDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      ....++...+++..+++..-++...++|.
T Consensus       146 ~~~e~~~~~~~~~~~~~~~ilR~~~~~G~  174 (328)
T TIGR03466       146 FLAEQAALEMAAEKGLPVVIVNPSTPIGP  174 (328)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEeCCccCCC
Confidence            55566666666666777766666556674

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=98.25  E-value=1.6e-05  Score=78.08  Aligned_cols=124  Identities=16%  Similarity=0.189  Sum_probs=78.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH--------HHhhhhcC-CccceEeeCCh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM--------ELVDAAFP-LLKGVVATTDA   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~--------dl~~~~~~-~~~~~~~~~~~   75 (332)
                      +|||+|+| +|.||..++..|+..|. +    .++..+|+++  ++.+....        .+.+.... ...+++.+++.
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~-g----~~V~gvD~~~--~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~   72 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCP-D----IEVVVVDISV--PRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDV   72 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCC-C----CeEEEEECCH--HHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCH
Confidence            36899999 79999999999998642 1    1799999985  44432111        11111000 12357888888


Q ss_pred             hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccch
Q 020022           76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTN  137 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~~  137 (332)
                      .+++++||++|++.+.|...+....+ -.-++..+.+.++.|.++..++.+|++- |-|....
T Consensus        73 ~~~i~~advi~I~V~TP~~~~g~~~~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt  134 (473)
T PLN02353         73 EKHVAEADIVFVSVNTPTKTRGLGAG-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA  134 (473)
T ss_pred             HHHHhcCCEEEEEeCCCCCCCCCcCC-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChH
Confidence            88999999999999998753210000 0224455667777777776555444443 5677654

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.23  E-value=1.1e-05  Score=74.83  Aligned_cols=162  Identities=17%  Similarity=0.199  Sum_probs=94.5

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh-hHHHHhhhhcCCccceEeeCC-hhhhc-----C
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-VKMELVDAAFPLLKGVVATTD-AVEAC-----T   80 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~-~~~dl~~~~~~~~~~~~~~~~-~~~al-----~   80 (332)
                      |.|+||+|++|++++..|+..|. .     .+.++|.......... ...|+.+..        ...+ ..+++     .
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~-~-----~v~~~~~~~~~~~~~~~~~~~~~d~~--------~~~~~~~~~~~~~~~~   67 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGI-T-----DILVVDNLKDGTKFVNLVDLDIADYM--------DKEDFLAQIMAGDDFG   67 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCC-c-----eEEEecCCCcchHHHhhhhhhhhhhh--------hHHHHHHHHhcccccC
Confidence            88999999999999999998763 1     4777886531110000 112222111        0001 12222     3


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEe
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCL  156 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~  156 (332)
                      ++|+|||+|+.+.....+....+..|+....++.+.+.+..   +++|+.|... +...    ...+. ....+...++.
T Consensus        68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~---~~~i~~SS~~-vyg~~~~~~~~E~-~~~~p~~~Y~~  142 (308)
T PRK11150         68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE---IPFLYASSAA-TYGGRTDDFIEER-EYEKPLNVYGY  142 (308)
T ss_pred             CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC---CcEEEEcchH-HhCcCCCCCCccC-CCCCCCCHHHH
Confidence            79999999986543333445577889999999999988764   3455555321 1000    00000 00112234666


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      +.....++...+++..+++...++...|+|..
T Consensus       143 sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~  174 (308)
T PRK11150        143 SKFLFDEYVRQILPEANSQICGFRYFNVYGPR  174 (308)
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeeeeecCCC
Confidence            77766666666666668877788877778864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.22  E-value=8.7e-06  Score=76.99  Aligned_cols=172  Identities=13%  Similarity=0.106  Sum_probs=101.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh----cCC-ccceEeeCChhhhcC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----FPL-LKGVVATTDAVEACT   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~----~~~-~~~~~~~~~~~~al~   80 (332)
                      +||.|+||+|++|++++..|+..|. .     .+.++|..+.....    ..+.+..    ... ..++.-..+..++++
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~-~-----~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   71 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETS-D-----AVVVVDKLTYAGNL----MSLAPVAQSERFAFEKVDICDRAELARVFT   71 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCC-C-----EEEEEecCccccch----hhhhhcccCCceEEEECCCcChHHHHHHHh
Confidence            5899999999999999999998763 1     46677754211111    1111100    000 011111122344555


Q ss_pred             --CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhc------CCC-eEEEEecCcccchHH------HHHH
Q 020022           81 --GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHA------APN-CKVLVVANPANTNAL------ILKE  143 (332)
Q Consensus        81 --~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~------~~~-~~viv~tNP~~~~~~------~~~~  143 (332)
                        ++|+||++||.....  .....+.+..|+.....+++.+.+++      .+. .+++.+|... +...      .+.+
T Consensus        72 ~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~E  150 (355)
T PRK10217         72 EHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE-VYGDLHSTDDFFTE  150 (355)
T ss_pred             hcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh-hcCCCCCCCCCcCC
Confidence              489999999865321  12345677889999999999887641      111 2455555421 1000      0001


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      . ....+...++.+.....++...+++..+++..-++...|+|.+.
T Consensus       151 ~-~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~  195 (355)
T PRK10217        151 T-TPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH  195 (355)
T ss_pred             C-CCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence            0 01122345788888888888888888899888888777888643

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=98.21  E-value=1.4e-05  Score=73.88  Aligned_cols=174  Identities=14%  Similarity=0.072  Sum_probs=98.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cC-CccceEeeCChhhhcCC--C
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACTG--V   82 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~-~~~~~~~~~~~~~al~~--a   82 (332)
                      ||.|+||+|++|++++..|+..+-     ..++.++|+........ ...++.... .. ....+.-..+..+++++  +
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~-----~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   74 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHP-----DAEVIVLDKLTYAGNLE-NLADLEDNPRYRFVKGDIGDRELVSRLFTEHQP   74 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCC-----CCEEEEecCCCcchhhh-hhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCC
Confidence            589999999999999999987541     11678887642111110 111111100 00 00111111234456666  8


Q ss_pred             cEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc--chH--HHHHHhCCCCCCCcEEEe
Q 020022           83 NIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN--TNA--LILKEFAPSIPAKNITCL  156 (332)
Q Consensus        83 DiVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~--~~~--~~~~~~~~~~~~~~i~~~  156 (332)
                      |+||++|+....  ........+..|+.....+++.+.+... +.+++.+|...-  ...  ....+. ....+...++.
T Consensus        75 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~v~g~~~~~~~~~e~-~~~~~~~~Y~~  152 (317)
T TIGR01181        75 DAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWH-EFRFHHISTDEVYGDLEKGDAFTET-TPLAPSSPYSA  152 (317)
T ss_pred             CEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeccceeCCCCCCCCcCCC-CCCCCCCchHH
Confidence            999999986431  1223456678899999999998887642 346666653210  000  000010 11222335666


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      +.....++...+++..+++..-++...++|..
T Consensus       153 sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~  184 (317)
T TIGR01181       153 SKAASDHLVRAYHRTYGLPALITRCSNNYGPY  184 (317)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence            77777777777777888887777777677753

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02778 3,5-epimerase/4-reductase

Probab=98.20  E-value=2.1e-05  Score=72.87  Aligned_cols=89  Identities=13%  Similarity=0.126  Sum_probs=60.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .|||.|+||+||+|++++..|+..|.       ++++...+.  ........++.                 +  .++|+
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-------~V~~~~~~~--~~~~~v~~~l~-----------------~--~~~D~   60 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGI-------DFHYGSGRL--ENRASLEADID-----------------A--VKPTH   60 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC-------EEEEecCcc--CCHHHHHHHHH-----------------h--cCCCE
Confidence            48999999999999999999988763       565443221  00111111111                 1  26899


Q ss_pred             EEEeCCCCCCCC-----CCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022           85 AVMVGGFPRKEG-----MERKDVMSKNVSIYKAQASALEQHA  121 (332)
Q Consensus        85 Vi~~ag~~~~~~-----~~r~~~~~~n~~i~~~i~~~i~~~~  121 (332)
                      |||+|+....+.     ....+.+..|+....++++.+++..
T Consensus        61 ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g  102 (298)
T PLN02778         61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG  102 (298)
T ss_pred             EEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999998754322     2456778899999999999998875

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.19  E-value=8.9e-06  Score=76.83  Aligned_cols=174  Identities=11%  Similarity=0.073  Sum_probs=100.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cC-CccceEeeCChhhhcC--C
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACT--G   81 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~-~~~~~~~~~~~~~al~--~   81 (332)
                      |||.|+||+|++|++++..|+..|. .     .+..+|......... ....+.... .. ...++.-..+..++++  +
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~-~-----~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   73 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQ-D-----SVVNVDKLTYAGNLE-SLADVSDSERYVFEHADICDRAELDRIFAQHQ   73 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCC-C-----eEEEecCCCccchHH-HHHhcccCCceEEEEecCCCHHHHHHHHHhcC
Confidence            4899999999999999999998753 1     355666532101111 000110000 00 0011111112344554  4


Q ss_pred             CcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhc-------CCCeEEEEecCcccchHH-------------
Q 020022           82 VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHA-------APNCKVLVVANPANTNAL-------------  139 (332)
Q Consensus        82 aDiVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~-------~~~~~viv~tNP~~~~~~-------------  139 (332)
                      +|+||++|+....  ......+.+..|+.....+++.+.++.       ....++|.+|... +...             
T Consensus        74 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~  152 (352)
T PRK10084         74 PDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSEEL  152 (352)
T ss_pred             CCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccccC
Confidence            7999999986532  122345678999999999999988751       0112455555321 1100             


Q ss_pred             -HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          140 -ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       140 -~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                       .+.+- ..+.+...++.++....++...+++..+++...++...|+|.+
T Consensus       153 ~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~  201 (352)
T PRK10084        153 PLFTET-TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPY  201 (352)
T ss_pred             CCcccc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCC
Confidence             00000 0122334678888888888887888889887777877778865

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.18  E-value=6.5e-06  Score=76.25  Aligned_cols=156  Identities=16%  Similarity=0.138  Sum_probs=88.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--CCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~aD   83 (332)
                      |||.|+||+||+|++++..|+..+        +++.+|+..  ..   ...|+.+..           ...++++  ++|
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g--------~V~~~~~~~--~~---~~~Dl~d~~-----------~~~~~~~~~~~D   56 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG--------NLIALDVHS--TD---YCGDFSNPE-----------GVAETVRKIRPD   56 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC--------CEEEecccc--cc---ccCCCCCHH-----------HHHHHHHhcCCC
Confidence            489999999999999999988754        366777642  11   112333221           2334455  589


Q ss_pred             EEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH---HH-HHHhCCCCCCCcEEEec
Q 020022           84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA---LI-LKEFAPSIPAKNITCLT  157 (332)
Q Consensus        84 iVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~---~~-~~~~~~~~~~~~i~~~t  157 (332)
                      +|||+|+.....  ..........|+....++++.+++..   .++|.+|... +..   .. ..+- .-..|...++.+
T Consensus        57 ~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g---~~~v~~Ss~~-Vy~~~~~~p~~E~-~~~~P~~~Yg~s  131 (299)
T PRK09987         57 VIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG---AWVVHYSTDY-VFPGTGDIPWQET-DATAPLNVYGET  131 (299)
T ss_pred             EEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEccce-EECCCCCCCcCCC-CCCCCCCHHHHH
Confidence            999999865321  12334455789999999999998864   3566655421 100   00 0000 001222346666


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceee
Q 020022          158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP  194 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~  194 (332)
                      ++...++...    +..+..-++...|+|..+...++
T Consensus       132 K~~~E~~~~~----~~~~~~ilR~~~vyGp~~~~~~~  164 (299)
T PRK09987        132 KLAGEKALQE----HCAKHLIFRTSWVYAGKGNNFAK  164 (299)
T ss_pred             HHHHHHHHHH----hCCCEEEEecceecCCCCCCHHH
Confidence            6665444322    22233445655667765444443

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.18  E-value=1.5e-05  Score=74.28  Aligned_cols=104  Identities=20%  Similarity=0.286  Sum_probs=66.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH----HH---Hhhhhc-------CCccceEe
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK----ME---LVDAAF-------PLLKGVVA   71 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~----~d---l~~~~~-------~~~~~~~~   71 (332)
                      +||+||| +|.+|+.++..|+..|.       +|+++|+++  +.++...    ..   +.+...       ....+++.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~-------~V~v~d~~~--~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~   72 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGH-------EVRLWDADP--AAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV   72 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCC-------eeEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE
Confidence            5899999 79999999999998764       799999984  3232110    00   111100       01234567


Q ss_pred             eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      +++..+++++||+|+.+.              ..+....+.+...+.+.+++++ + +.||...
T Consensus        73 ~~~~~~a~~~ad~Vi~av--------------pe~~~~k~~~~~~l~~~~~~~~-i-i~ssts~  120 (308)
T PRK06129         73 TDSLADAVADADYVQESA--------------PENLELKRALFAELDALAPPHA-I-LASSTSA  120 (308)
T ss_pred             ECcHHHhhCCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCcc-e-EEEeCCC
Confidence            778888899999999884              1223445556666777775553 3 3565444

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=98.17  E-value=3.5e-05  Score=74.68  Aligned_cols=111  Identities=23%  Similarity=0.322  Sum_probs=70.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--------------ccceEe
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------LKGVVA   71 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--------------~~~~~~   71 (332)
                      |||+||| .|.||..++..|+..|.       +|.++|+++  ++.+.    +.....+.              ..+++.
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~-------~V~~~d~~~--~~v~~----l~~g~~~~~e~~l~~~~~~~~~~g~l~~   66 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGH-------EVTGVDIDQ--EKVDK----LNKGKSPIYEPGLDELLAKALAAGRLRA   66 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCC-------eEEEEECCH--HHHHH----hhcCCCCCCCCCHHHHHHHhhhcCCeEE
Confidence            4899999 79999999999998763       799999984  33321    22211100              123566


Q ss_pred             eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-Ccccc
Q 020022           72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANT  136 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~  136 (332)
                      +++..+++++||+||++.+.+.....+      -+...+....+.+.++..++.++++.| -|...
T Consensus        67 ~~~~~~~~~~advvii~vpt~~~~~~~------~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt  126 (411)
T TIGR03026        67 TTDYEDAIRDADVIIICVPTPLKEDGS------PDLSYVESAAETIAKHLRKGATVVLESTVPPGT  126 (411)
T ss_pred             ECCHHHHHhhCCEEEEEeCCCCCCCCC------cChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCc
Confidence            677778899999999998877543221      133444555555655544555555544 34443

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.17  E-value=2.4e-05  Score=80.52  Aligned_cols=173  Identities=14%  Similarity=0.109  Sum_probs=101.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC------hh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD------AV   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~------~~   76 (332)
                      +++||.|+||+||+|++++..|+..+. +    .+|+.+|.......+.    .+....  ...++.. ..|      ..
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~-~----~~V~~~d~~~~~~~~~----~l~~~~--~~~~v~~~~~Dl~d~~~~~   73 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYP-D----YKIVVLDKLDYCSNLK----NLNPSK--SSPNFKFVKGDIASADLVN   73 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCC-C----CEEEEEeCCCccchhh----hhhhcc--cCCCeEEEECCCCChHHHH
Confidence            578999999999999999999987631 1    1788888642111111    110000  0011111 111      11


Q ss_pred             hhc--CCCcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH------HhCC
Q 020022           77 EAC--TGVNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK------EFAP  146 (332)
Q Consensus        77 ~al--~~aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~------~~~~  146 (332)
                      ..+  .++|+||++|+......  ....++...|+...+.+.+.+++.+ +-.++|.+|.- .+....-.      ....
T Consensus        74 ~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~-~vyg~~~~~~~~~~~E~~  151 (668)
T PLN02260         74 YLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTD-EVYGETDEDADVGNHEAS  151 (668)
T ss_pred             HHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcch-HHhCCCccccccCccccC
Confidence            222  68999999998753221  2334667889999999999988875 22356666641 11000000      0000


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      ...+...++.++....++....++..+++..-++...|+|.+.
T Consensus       152 ~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~  194 (668)
T PLN02260        152 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ  194 (668)
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence            1112335677888888887777777888877778777788654

>PRK09135 pteridine reductase; Provisional

Probab=98.14  E-value=4e-05  Score=68.26  Aligned_cols=153  Identities=11%  Similarity=0.082  Sum_probs=82.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc----cceEeeCChhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL----KGVVATTDAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~----~~~~~~~~~~~al   79 (332)
                      +.++|.|+||+|++|++++..|+..|.       ++.++++.. ++.+.....++.+......    .++........++
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   76 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-------RVAIHYHRS-AAEADALAAELNALRPGSAAALQADLLDPDALPELV   76 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC-HHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHH
Confidence            447899999999999999999998764       788888753 2233322233332210000    0111111112222


Q ss_pred             -------CCCcEEEEeCCCCCCC---CC---CHHHHHHhhHHHHHHHHHHHHhhcC-CCeEEEEecCcccchHHHHHHhC
Q 020022           80 -------TGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        80 -------~~aDiVi~~ag~~~~~---~~---~r~~~~~~n~~i~~~i~~~i~~~~~-~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                             ...|+||+++|.....   ..   +..+.+..|+.....+.+.+.++-. ....++..+. .       ... 
T Consensus        77 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~-~-------~~~-  147 (249)
T PRK09135         77 AACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD-I-------HAE-  147 (249)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC-h-------hhc-
Confidence                   3579999999863211   11   2344566787766666666544311 1234444332 1       011 


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      ...++...++.++.....+...+++.++
T Consensus       148 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~  175 (249)
T PRK09135        148 RPLKGYPVYCAAKAALEMLTRSLALELA  175 (249)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHC
Confidence            1233334566677666666667777664

>PLN02240 UDP-glucose 4-epimerase

Probab=98.14  E-value=1.5e-05  Score=75.18  Aligned_cols=175  Identities=15%  Similarity=0.056  Sum_probs=93.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc---CCc----cceEeeC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLL----KGVVATT   73 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~---~~~----~~~~~~~   73 (332)
                      |+++.+||.|+||+|++|++++..|+..+.       +|+++|+...  ........+.+...   ...    .++.-..
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   71 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGY-------KVVVIDNLDN--SSEEALRRVKELAGDLGDNLVFHKVDLRDKE   71 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCCc--chHHHHHHHHHhhcccCccceEEecCcCCHH
Confidence            777788999999999999999999998763       7888886421  00000011111100   000    0111111


Q ss_pred             ChhhhcC--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhC
Q 020022           74 DAVEACT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFA  145 (332)
Q Consensus        74 ~~~~al~--~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~  145 (332)
                      +..++++  ++|+||++|+.....  .......+..|+.....+++.+.+...  ..++++|. ..+...    .+.+- 
T Consensus        72 ~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss-~~vyg~~~~~~~~E~-  147 (352)
T PLN02240         72 ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGC--KKLVFSSS-ATVYGQPEEVPCTEE-  147 (352)
T ss_pred             HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEEcc-HHHhCCCCCCCCCCC-
Confidence            2233343  689999999864311  124456788999999999998877642  24666654 221000    00000 


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHH-cCCCCCCeeeeEEEecc
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~-l~v~~~~v~~~~v~G~h  188 (332)
                      ..+.+...++.+.....++...+++. .++...-++...++|.|
T Consensus       148 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~  191 (352)
T PLN02240        148 FPLSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAH  191 (352)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence            01111223455566665655545433 45544445544445543

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=98.14  E-value=5.4e-05  Score=69.97  Aligned_cols=110  Identities=23%  Similarity=0.256  Sum_probs=76.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh--hhc------CCccceEeeCChh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD--AAF------PLLKGVVATTDAV   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~--~~~------~~~~~~~~~~~~~   76 (332)
                      ++||+|+| +|.-|++++..|+..+-       +++|+.+++  +.    +.++.+  ...      .+..++..++|+.
T Consensus         1 ~~kI~ViG-aGswGTALA~~la~ng~-------~V~lw~r~~--~~----~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~   66 (329)
T COG0240           1 MMKIAVIG-AGSWGTALAKVLARNGH-------EVRLWGRDE--EI----VAEINETRENPKYLPGILLPPNLKATTDLA   66 (329)
T ss_pred             CceEEEEc-CChHHHHHHHHHHhcCC-------eeEEEecCH--HH----HHHHHhcCcCccccCCccCCcccccccCHH
Confidence            46999999 69999999999998862       799999884  22    223332  221      1346788899999


Q ss_pred             hhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC-----cccchHHHHHHh
Q 020022           77 EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-----PANTNALILKEF  144 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN-----P~~~~~~~~~~~  144 (332)
                      +++++||+|+++.  |              ...++++++++..+-.++.+++.+|.     +...+..++.+.
T Consensus        67 ~a~~~ad~iv~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~  123 (329)
T COG0240          67 EALDGADIIVIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEE  123 (329)
T ss_pred             HHHhcCCEEEEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCcchHHHHHHHH
Confidence            9999999999983  2              24455666666555556777777763     223455555554

>PLN02583 cinnamoyl-CoA reductase

Probab=98.13  E-value=2.3e-05  Score=72.52  Aligned_cols=176  Identities=12%  Similarity=0.045  Sum_probs=99.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh--c-CCccceEeeCChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--F-PLLKGVVATTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~--~-~~~~~~~~~~~~~~al~   80 (332)
                      ..++|+|+||+|++|++++..|+..|.       +|++.+++...........++....  . .....+.-.....+++.
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~-------~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGY-------TVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc
Confidence            356899999999999999999998774       6888776421111111111111000  0 00011111123467889


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH------hC-CCC-CC--
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE------FA-PSI-PA--  150 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~------~~-~~~-~~--  150 (332)
                      ++|.|++.++.+........+.+..|+.....+.+.+.+.... .+||++|.-.... +.-..      +. ..+ ++  
T Consensus        78 ~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v-~riV~~SS~~a~~-~~~~~~~~~~~~~E~~~~~~~~  155 (297)
T PLN02583         78 GCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTI-EKVVFTSSLTAVI-WRDDNISTQKDVDERSWSDQNF  155 (297)
T ss_pred             CCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEecchHhee-cccccCCCCCCCCcccCCCHHH
Confidence            9999998776443221224567889999999999998876312 3566555422111 00000      00 000 00  


Q ss_pred             ---Cc-EEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          151 ---KN-ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       151 ---~~-i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                         .. .++.+.....++.+.+++..+++..-++...|+|..
T Consensus       156 ~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~  197 (297)
T PLN02583        156 CRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPS  197 (297)
T ss_pred             HhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCC
Confidence               01 355667777777666666668877777766677753

>PRK06194 hypothetical protein; Provisional

Probab=98.11  E-value=3.1e-05  Score=70.90  Aligned_cols=161  Identities=17%  Similarity=0.106  Sum_probs=89.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~al~   80 (332)
                      +.++|.|+||+|++|++++..|+..|.       +++++|++.  +.++....++......   ...++.-..+..++++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   75 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-------KLVLADVQQ--DALDRAVAELRAQGAEVLGVRTDVSDAAQVEALAD   75 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            446899999999999999999998764       789999874  3343333333221100   0001111111222222


Q ss_pred             -------CCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHH----HHHHHHhhcCC----CeEEEEecCcccchHH
Q 020022           81 -------GVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKA----QASALEQHAAP----NCKVLVVANPANTNAL  139 (332)
Q Consensus        81 -------~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~----i~~~i~~~~~~----~~~viv~tNP~~~~~~  139 (332)
                             ..|+||+.||.....   ..+.+   ..+..|+.....    +.+.+.+.+.+    .+.++++|.-...   
T Consensus        76 ~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~---  152 (287)
T PRK06194         76 AALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL---  152 (287)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc---
Confidence                   469999999975421   12222   335566654444    44445554421    1456666543221   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV  182 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~  182 (332)
                            .+.+....++.+..-...+...+++.++.....++..
T Consensus       153 ------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~  189 (287)
T PRK06194        153 ------LAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGAS  189 (287)
T ss_pred             ------cCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence                  1122223466677666677777888887766667633

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=98.08  E-value=2.8e-05  Score=65.48  Aligned_cols=92  Identities=16%  Similarity=0.256  Sum_probs=58.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |+||++|| .|.+|+.++..|+..|.       ++..||+++  ++++    ++.+.      ......+..+++++||+
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~-------~v~~~d~~~--~~~~----~~~~~------g~~~~~s~~e~~~~~dv   60 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGY-------EVTVYDRSP--EKAE----ALAEA------GAEVADSPAEAAEQADV   60 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTT-------EEEEEESSH--HHHH----HHHHT------TEEEESSHHHHHHHBSE
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCC-------eEEeeccch--hhhh----hhHHh------hhhhhhhhhhHhhcccc
Confidence            46999999 89999999999998764       899999873  3332    23322      13455678899999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHH--HHhhcCCCeEEEEec
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASA--LEQHAAPNCKVLVVA  131 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~--i~~~~~~~~~viv~t  131 (332)
                      |+.+-.               +-+.++++...  +.....++.++|..|
T Consensus        61 vi~~v~---------------~~~~v~~v~~~~~i~~~l~~g~iiid~s   94 (163)
T PF03446_consen   61 VILCVP---------------DDDAVEAVLFGENILAGLRPGKIIIDMS   94 (163)
T ss_dssp             EEE-SS---------------SHHHHHHHHHCTTHGGGS-TTEEEEE-S
T ss_pred             eEeecc---------------cchhhhhhhhhhHHhhccccceEEEecC
Confidence            998731               33445555555  545444555555544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=98.07  E-value=0.0002  Score=61.99  Aligned_cols=96  Identities=17%  Similarity=0.144  Sum_probs=61.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ||+++|+| +|++|++++..+...+.       |+..--.+. ++.+++....+.-       .++. ....+|.+.||+
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~-------eV~igs~r~-~~~~~a~a~~l~~-------~i~~-~~~~dA~~~aDV   63 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGH-------EVIIGSSRG-PKALAAAAAALGP-------LITG-GSNEDAAALADV   63 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCC-------eEEEecCCC-hhHHHHHHHhhcc-------cccc-CChHHHHhcCCE
Confidence            46899999 79999999999998763       777775554 3334333332221       2223 356789999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      ||++.-            +....    ++.+.++..- .+.+||-.|||.
T Consensus        64 VvLAVP------------~~a~~----~v~~~l~~~~-~~KIvID~tnp~   96 (211)
T COG2085          64 VVLAVP------------FEAIP----DVLAELRDAL-GGKIVIDATNPI   96 (211)
T ss_pred             EEEecc------------HHHHH----hHHHHHHHHh-CCeEEEecCCCc
Confidence            999942            12233    4444444432 355777889994

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.06  E-value=2.6e-05  Score=77.53  Aligned_cols=117  Identities=14%  Similarity=0.086  Sum_probs=73.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh------cC--CccceEe----e
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA------FP--LLKGVVA----T   72 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~------~~--~~~~~~~----~   72 (332)
                      .+.|.|+||+|++|++++..|+..|.       +|++++++.  +++.....++.+..      ..  ...-+..    .
T Consensus        80 gKvVLVTGATGgIG~aLAr~LLk~G~-------~Vval~Rn~--ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~  150 (576)
T PLN03209         80 EDLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSA--QRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP  150 (576)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHhhhhccccccccccCceEEEEecCCCH
Confidence            46899999999999999999998763       788888874  33332222221100      00  0000111    1


Q ss_pred             CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           73 TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        73 ~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      .+..+++.++|+||+++|.......+....+..|....+.+++.+.+...  .+||++|.
T Consensus       151 esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agV--gRIV~VSS  208 (576)
T PLN03209        151 DQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKV--NHFILVTS  208 (576)
T ss_pred             HHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCC--CEEEEEcc
Confidence            12345788999999999876432222334456788888899988887652  35666663

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=98.05  E-value=2.1e-05  Score=74.00  Aligned_cols=177  Identities=16%  Similarity=0.151  Sum_probs=100.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~a   82 (332)
                      ++.++.||||+||+|.+++..|...+..     .+|+++|..+.......+..++....... ...+........|+.++
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~-----~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~   77 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELK-----LEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA   77 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccc-----cEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc
Confidence            4568999999999999999999987632     28999998753122222212110000000 11222334577899999


Q ss_pred             cEEEE-eCCCCCCCCC-CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH---HH-HHHhCCCCCCCc--EE
Q 020022           83 NIAVM-VGGFPRKEGM-ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA---LI-LKEFAPSIPAKN--IT  154 (332)
Q Consensus        83 DiVi~-~ag~~~~~~~-~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~---~~-~~~~~~~~~~~~--i~  154 (332)
                       .|+| +|+....... .++.....|+...+.+.+.+.+.+-+   .+++|....+.-   .+ -....-.+|..-  .+
T Consensus        78 -~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~---~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y  153 (361)
T KOG1430|consen   78 -VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVK---RLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPY  153 (361)
T ss_pred             -eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCC---EEEEecCceEEeCCeecccCCCCCCCcccccccc
Confidence             5555 4443222223 46777789999999999999998742   344543333211   10 011101234221  46


Q ss_pred             EechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC
Q 020022          155 CLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS  190 (332)
Q Consensus       155 ~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~  190 (332)
                      +.|.....++....+..-+....-+|...|+|+ |+
T Consensus       154 ~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGp-gd  188 (361)
T KOG1430|consen  154 GESKALAEKLVLEANGSDDLYTCALRPPGIYGP-GD  188 (361)
T ss_pred             chHHHHHHHHHHHhcCCCCeeEEEEccccccCC-CC
Confidence            767766555544443333345566676667786 44

>PLN02686 cinnamoyl-CoA reductase

Probab=98.02  E-value=2.5e-05  Score=74.48  Aligned_cols=174  Identities=15%  Similarity=0.120  Sum_probs=99.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh--------hcC-CccceEeeCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA--------AFP-LLKGVVATTD   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~--------~~~-~~~~~~~~~~   74 (332)
                      +.++|+|+||+|++|++++..|+..|.       +|+++..+.  +.+... .++...        ... ...++.-...
T Consensus        52 ~~k~VLVTGatGfIG~~lv~~L~~~G~-------~V~~~~r~~--~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~  121 (367)
T PLN02686         52 EARLVCVTGGVSFLGLAIVDRLLRHGY-------SVRIAVDTQ--EDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPES  121 (367)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHH-HHHhhhccccccCCceEEEEcCCCCHHH
Confidence            457999999999999999999998763       676655442  222111 111100        000 0011111123


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCCC--CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc-cchH--------HHHHH
Q 020022           75 AVEACTGVNIAVMVGGFPRKEGM--ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA-NTNA--------LILKE  143 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~~--~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~-~~~~--------~~~~~  143 (332)
                      ..++++++|.||++++.....+.  ........|+...+++.+.+.+...- .++|+.|... .+.-        ..+.+
T Consensus       122 l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v-~r~V~~SS~~~~vyg~~~~~~~~~~i~E  200 (367)
T PLN02686        122 LHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESV-RKCVFTSSLLACVWRQNYPHDLPPVIDE  200 (367)
T ss_pred             HHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCc-cEEEEeccHHHhcccccCCCCCCcccCC
Confidence            45678899999999886432221  12344567889899999988875211 2455555421 1000        00000


Q ss_pred             hC-C--CCC--CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          144 FA-P--SIP--AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       144 ~~-~--~~~--~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      -. .  ..+  +...++.+++...++.+.+++..|++..-++...|+|..
T Consensus       201 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        201 ESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG  250 (367)
T ss_pred             CCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence            00 0  001  112366778887788777788888888888877778863

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=98.01  E-value=3.8e-05  Score=72.43  Aligned_cols=107  Identities=21%  Similarity=0.219  Sum_probs=62.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc----CCccceEeeCChhhhcC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PLLKGVVATTDAVEACT   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~----~~~~~~~~~~~~~~al~   80 (332)
                      +|||+|+| +|.||+.++..|...|.       +|.++|+++..+.+......+.+...    ....++..+++. ++++
T Consensus         2 ~mkI~IiG-~G~mG~~~A~~L~~~G~-------~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   72 (341)
T PRK08229          2 MARICVLG-AGSIGCYLGGRLAAAGA-------DVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALA   72 (341)
T ss_pred             CceEEEEC-CCHHHHHHHHHHHhcCC-------cEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccCh-hhcc
Confidence            36899999 79999999999998763       68999985311111100000000000    001123344444 6789


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      ++|+||++...+.                ..++++.+..+..++.+|+..+|..+.
T Consensus        73 ~~D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~  112 (341)
T PRK08229         73 TADLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRN  112 (341)
T ss_pred             CCCEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCc
Confidence            9999999863221                123344455554566667777887654

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.00  E-value=2.4e-05  Score=71.46  Aligned_cols=98  Identities=21%  Similarity=0.313  Sum_probs=66.8

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEE
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVM   87 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~   87 (332)
                      |.|+||+|++|++++..|+..+.       +|+.+++++.  .......+  ..     ..+.. ....++++++|+||+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~--~~-----~~~~~-~~~~~~~~~~D~Vvh   63 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGH-------EVTILTRSPP--AGANTKWE--GY-----KPWAP-LAESEALEGADAVIN   63 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCC-------EEEEEeCCCC--CCCcccce--ee-----ecccc-cchhhhcCCCCEEEE
Confidence            57999999999999999998763       7899998752  21111000  00     00011 234577899999999


Q ss_pred             eCCCCCCCC-C---CHHHHHHhhHHHHHHHHHHHHhhcC
Q 020022           88 VGGFPRKEG-M---ERKDVMSKNVSIYKAQASALEQHAA  122 (332)
Q Consensus        88 ~ag~~~~~~-~---~r~~~~~~n~~i~~~i~~~i~~~~~  122 (332)
                      +|+.+...+ .   ...++...|+...+.+++.++++..
T Consensus        64 ~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~  102 (292)
T TIGR01777        64 LAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQ  102 (292)
T ss_pred             CCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCC
Confidence            998754322 1   2345677899999999999998763

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=97.99  E-value=7.1e-05  Score=69.92  Aligned_cols=104  Identities=19%  Similarity=0.257  Sum_probs=65.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh----cCCccceEeeCChhhhcCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----FPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~----~~~~~~~~~~~~~~~al~~   81 (332)
                      |||+|+| +|.+|+.++..|+..+.       ++.++|+++  +.++....+..+..    ......+...++..+++++
T Consensus         2 mkI~iiG-~G~mG~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (325)
T PRK00094          2 MKIAVLG-AGSWGTALAIVLARNGH-------DVTLWARDP--EQAAEINADRENPRYLPGIKLPDNLRATTDLAEALAD   71 (325)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhC
Confidence            5899999 69999999999998753       789999874  33322211100000    0011234555666778899


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      +|+||++...                ..++++.+.+..+..++.+++..+|-++
T Consensus        72 ~D~vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~  109 (325)
T PRK00094         72 ADLILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIE  109 (325)
T ss_pred             CCEEEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeeccc
Confidence            9999998421                1234444555555545667777877554

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=97.99  E-value=0.00015  Score=69.63  Aligned_cols=120  Identities=18%  Similarity=0.166  Sum_probs=69.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH--------HHhhhhcCCccceEeeCChhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM--------ELVDAAFPLLKGVVATTDAVE   77 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~--------dl~~~~~~~~~~~~~~~~~~~   77 (332)
                      |||+||| +|.||..++..++. |.       +++.+|+++  ++++....        .+++.......+++.+++..+
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA~-G~-------~VigvD~d~--~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~   69 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIAQ-NH-------EVVALDILP--SRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNE   69 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-CC-------cEEEEECCH--HHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhh
Confidence            4899999 79999999977764 42       799999985  44332111        001000001224555666778


Q ss_pred             hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccchHHHHH
Q 020022           78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTNALILK  142 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~~~~~~~  142 (332)
                      +.++||+||++...+......     .-++..+++.++.|.+. .++..||+- |-|....-.+..
T Consensus        70 ~~~~ad~vii~Vpt~~~~k~~-----~~dl~~v~~v~~~i~~~-~~g~lVV~~STv~pgtt~~l~~  129 (388)
T PRK15057         70 AYRDADYVIIATPTDYDPKTN-----YFNTSSVESVIKDVVEI-NPYAVMVIKSTVPVGFTAAMHK  129 (388)
T ss_pred             hhcCCCEEEEeCCCCCccCCC-----CcChHHHHHHHHHHHhc-CCCCEEEEeeecCCchHHHHHH
Confidence            889999999997766322111     12334445555555553 355555544 457665544443

>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+))

Probab=97.99  E-value=5.3e-05  Score=71.40  Aligned_cols=106  Identities=24%  Similarity=0.319  Sum_probs=65.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCC-CceEEEEEeCCC---chhhhhhhHHHHhhhhc------CCccceEeeCChh
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTD-QPVILHMLDIPP---AAEALNGVKMELVDAAF------PLLKGVVATTDAV   76 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~-~~~ei~L~D~~~---~~~~l~~~~~dl~~~~~------~~~~~~~~~~~~~   76 (332)
                      ||+||| +|..|+++|..|...+...+. ...+|.|+.+++   +++..+.  ..-.+...      .+..+++.++++.
T Consensus         1 kI~VIG-aG~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~--in~~~~n~~ylpgi~Lp~~i~at~dl~   77 (342)
T TIGR03376         1 RVAVVG-SGNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEI--INTTHENVKYLPGIKLPANLVAVPDLV   77 (342)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHH--HHhcCCCccccCCCcCCCCeEEECCHH
Confidence            699999 699999999999886522111 001799998843   1222111  11112111      1235678888999


Q ss_pred             hhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           77 EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      +++++||+||++.  |              ...++++++++..+-+++..+|.+|
T Consensus        78 eal~~ADiIIlAV--P--------------s~~i~~vl~~l~~~l~~~~~iVs~t  116 (342)
T TIGR03376        78 EAAKGADILVFVI--P--------------HQFLEGICKQLKGHVKPNARAISCI  116 (342)
T ss_pred             HHHhcCCEEEEEC--C--------------hHHHHHHHHHHHhhcCCCCEEEEEe
Confidence            9999999999983  2              2445566666666544444455554

Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.98  E-value=3.7e-05  Score=58.52  Aligned_cols=94  Identities=20%  Similarity=0.238  Sum_probs=58.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccceEeeC-ChhhhcCCCcE
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI   84 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-~~~~al~~aDi   84 (332)
                      ||+||| +|.+|++++..|+..+. .   +.++.++ ++++  ++++....++.         +.... +..++++.||+
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~-~---~~~v~~~~~r~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~adv   64 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGI-K---PHEVIIVSSRSP--EKAAELAKEYG---------VQATADDNEEAAQEADV   64 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-----GGEEEEEEESSH--HHHHHHHHHCT---------TEEESEEHHHHHHHTSE
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCC-C---ceeEEeeccCcH--HHHHHHHHhhc---------cccccCChHHhhccCCE
Confidence            799999 79999999999998874 2   2267755 8874  44432222211         12223 57888999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      ||++.-    |            ..+.+++..+.... ++..+|-++||
T Consensus        65 vilav~----p------------~~~~~v~~~i~~~~-~~~~vis~~ag   96 (96)
T PF03807_consen   65 VILAVK----P------------QQLPEVLSEIPHLL-KGKLVISIAAG   96 (96)
T ss_dssp             EEE-S-----G------------GGHHHHHHHHHHHH-TTSEEEEESTT
T ss_pred             EEEEEC----H------------HHHHHHHHHHhhcc-CCCEEEEeCCC
Confidence            999842    1            11335555663333 55667666765

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.97  E-value=9e-05  Score=70.01  Aligned_cols=114  Identities=19%  Similarity=0.180  Sum_probs=71.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHH---hhh--hcCCccceEeeCChhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL---VDA--AFPLLKGVVATTDAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl---~~~--~~~~~~~~~~~~~~~~a   78 (332)
                      .+|||+|+| +|.+|++++..|...+        .++++.+++  +..+....+-   ...  ......++..+++..++
T Consensus         6 ~~mkI~IiG-aGa~G~alA~~La~~g--------~v~l~~~~~--~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a   74 (341)
T PRK12439          6 REPKVVVLG-GGSWGTTVASICARRG--------PTLQWVRSA--ETADDINDNHRNSRYLGNDVVLSDTLRATTDFAEA   74 (341)
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCC--------CEEEEeCCH--HHHHHHHhcCCCcccCCCCcccCCCeEEECCHHHH
Confidence            468999999 6999999999998764        366777653  3222111110   000  01112356677788888


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-----hHHHHHHh
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-----NALILKEF  144 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-----~~~~~~~~  144 (332)
                      ++++|+||++.-                ...++++++.+..+-.++..+|.++|-++.     +...+.++
T Consensus        75 ~~~aDlVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~~  129 (341)
T PRK12439         75 ANCADVVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEV  129 (341)
T ss_pred             HhcCCEEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHHH
Confidence            999999999841                234556666666655556667788886553     34455554

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=97.96  E-value=2.1e-05  Score=69.42  Aligned_cols=166  Identities=15%  Similarity=0.217  Sum_probs=98.2

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC--cEE
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV--NIA   85 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a--DiV   85 (332)
                      |.|+||+|++|++++..|+..+.       ++..+......+... ...  ..... ...++.-.....+++++.  |.|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~-------~v~~~~~~~~~~~~~-~~~--~~~~~-~~~dl~~~~~~~~~~~~~~~d~v   69 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGH-------EVIVLSRSSNSESFE-EKK--LNVEF-VIGDLTDKEQLEKLLEKANIDVV   69 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTT-------EEEEEESCSTGGHHH-HHH--TTEEE-EESETTSHHHHHHHHHHHTESEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCC-------ccccccccccccccc-ccc--ceEEE-EEeeccccccccccccccCceEE
Confidence            78999999999999999998763       444343332211111 100  00000 000000112345566666  999


Q ss_pred             EEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH----HHhCCCCCCCcEEEechH
Q 020022           86 VMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL----KEFAPSIPAKNITCLTRL  159 (332)
Q Consensus        86 i~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~----~~~~~~~~~~~i~~~t~l  159 (332)
                      |++|+....  ...+..+....|+...+.+.+.+.+...  .++++.|. ..+.....    .+. +...+...++.+..
T Consensus        70 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~~i~~sS-~~~y~~~~~~~~~e~-~~~~~~~~Y~~~K~  145 (236)
T PF01370_consen   70 IHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGV--KRFIFLSS-ASVYGDPDGEPIDED-SPINPLSPYGASKR  145 (236)
T ss_dssp             EEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEE-GGGGTSSSSSSBETT-SGCCHSSHHHHHHH
T ss_pred             EEeeccccccccccccccccccccccccccccccccccc--cccccccc-ccccccccccccccc-cccccccccccccc
Confidence            999987531  1134567788999999999999999873  35666654 22100000    000 00011123556677


Q ss_pred             HHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          160 DHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      ...++...++++.+++...++...|+|.+
T Consensus       146 ~~e~~~~~~~~~~~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  146 AAEELLRDYAKKYGLRVTILRPPNVYGPG  174 (236)
T ss_dssp             HHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred             ccccccccccccccccccccccccccccc
Confidence            77777777888889999999988888876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=97.96  E-value=3.2e-05  Score=72.78  Aligned_cols=162  Identities=8%  Similarity=-0.056  Sum_probs=89.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh---hhcCC----ccceEeeCChh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD---AAFPL----LKGVVATTDAV   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~---~~~~~----~~~~~~~~~~~   76 (332)
                      +.++|.|+||+|++|++++..|+..|.       +|+++++.+. .........+..   .....    ..++.-.....
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~-------~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   76 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGY-------EVHGIIRRSS-NFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLR   76 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCC-------EEEEEecccc-cccccchhhhccccccccCceEEEEecCCCHHHHH
Confidence            347899999999999999999998764       7888887531 100001111110   00000    00111111233


Q ss_pred             hhcCC--CcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCC---eEEEEecCcccchHH---HHHHhCC
Q 020022           77 EACTG--VNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPN---CKVLVVANPANTNAL---ILKEFAP  146 (332)
Q Consensus        77 ~al~~--aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~---~~viv~tNP~~~~~~---~~~~~~~  146 (332)
                      +++++  .|+||++|+......  ......+..|+.....+++.+.++..+.   .++|+.|. ..+...   -..+- .
T Consensus        77 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss-~~vyg~~~~~~~E~-~  154 (340)
T PLN02653         77 RWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS-SEMYGSTPPPQSET-T  154 (340)
T ss_pred             HHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc-HHHhCCCCCCCCCC-C
Confidence            44553  599999998753221  2234455778888899999888876321   24555542 111000   00000 0


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCC
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQ  175 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~  175 (332)
                      -+.+...++.++.....+...+++..++.
T Consensus       155 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~  183 (340)
T PLN02653        155 PFHPRSPYAVAKVAAHWYTVNYREAYGLF  183 (340)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHcCCe
Confidence            11223467888888778777778877764

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=97.95  E-value=0.00013  Score=68.47  Aligned_cols=171  Identities=15%  Similarity=0.076  Sum_probs=91.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe--e--CChhhhcC-
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA--T--TDAVEACT-   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~--~--~~~~~al~-   80 (332)
                      |||.|+||+|++|++++..|+..|.       +|+++|+... . .......+.+.......-+..  +  ....++++ 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   71 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGH-------DVVILDNLCN-S-KRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD   71 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCC-c-hHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc
Confidence            4899999999999999999998763       7888876421 1 111111111110000000111  1  11233444 


Q ss_pred             -CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcE
Q 020022           81 -GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNI  153 (332)
Q Consensus        81 -~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i  153 (332)
                       ++|+||++|+.....  .....+.+..|+.....+++.+++...  .+++++|. ..+...    .+.+-.+--.+...
T Consensus        72 ~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss-~~~yg~~~~~~~~E~~~~~~p~~~  148 (338)
T PRK10675         72 HAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANV--KNLIFSSS-ATVYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_pred             CCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEecc-HHhhCCCCCCccccccCCCCCCCh
Confidence             689999999865321  123457788999999999998887642  24555554 211000    00000000011223


Q ss_pred             EEechHHHHHHHHHHHHH-cCCCCCCeeeeEEEecc
Q 020022          154 TCLTRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       154 ~~~t~lds~r~~~~la~~-l~v~~~~v~~~~v~G~h  188 (332)
                      ++.+.....++...+++. .+++..-++...+.|.|
T Consensus       149 Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~  184 (338)
T PRK10675        149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCC
Confidence            555666666666666554 35554555655556654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.95  E-value=8.8e-05  Score=66.16  Aligned_cols=121  Identities=23%  Similarity=0.261  Sum_probs=67.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-CCccceEeeCChh--
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAV--   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~~~~~~~~~~~~~--   76 (332)
                      |..+.++|.|+||+|.+|++++..|+..|.       ++.++++++  +.+.....++.+.. . ....++....+..  
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   71 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGA-------RVVVTDRNE--EAAERVAAEILAGGRAIAVAADVSDEADVEAA   71 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            666678999999999999999999998763       799999874  33332222332100 0 0000110011111  


Q ss_pred             -----hhcCCCcEEEEeCCCCCCCC----CC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022           77 -----EACTGVNIAVMVGGFPRKEG----ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        77 -----~al~~aDiVi~~ag~~~~~~----~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                           +.+...|+||+++|......    .+   ..+.+..|+..    .+.+.+.+.+..  ...++++|.
T Consensus        72 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~~sS  141 (251)
T PRK07231         72 VAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG--GGAIVNVAS  141 (251)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CcEEEEEcC
Confidence                 12346799999998743211    12   22345566654    444444444433  245666654

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=97.94  E-value=5.8e-05  Score=69.90  Aligned_cols=107  Identities=13%  Similarity=0.100  Sum_probs=61.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH---HHhhhhcCCccceEeeCChhhhcCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM---ELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~---dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      |||+|+| +|.+|..++..|...|.       ++.++++ +  +..+....   .+..............++..++.+++
T Consensus         1 mkI~IiG-~G~iG~~~a~~L~~~g~-------~V~~~~r-~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (305)
T PRK12921          1 MRIAVVG-AGAVGGTFGGRLLEAGR-------DVTFLVR-P--KRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPF   69 (305)
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCC-------ceEEEec-H--HHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCC
Confidence            5899999 69999999999998753       6899998 3  22222111   00000000000112234445556899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                      |+||++.-.+                .+.++.+.+..+-.++..|+...|.++....
T Consensus        70 d~vilavk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~  110 (305)
T PRK12921         70 DLVILAVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQ  110 (305)
T ss_pred             CEEEEEeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHH
Confidence            9999985322                1234444555544455667778898764433

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.93  E-value=0.00018  Score=64.67  Aligned_cols=157  Identities=18%  Similarity=0.133  Sum_probs=84.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~-------   76 (332)
                      +.++|.|+||+|++|.+++..|+..|.       ++.++|++.  +.+.....++.........++.-..+..       
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGA-------RVVIADIKP--ARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAV   75 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            456899999999999999999998764       789999874  3333222222110000000111111111       


Q ss_pred             hhcCCCcEEEEeCCCCCC-C--CCC---HHHHHHhhHHHHHHHHHHHHhhc---CCCeEEEEecCcccchHHHHHHhCCC
Q 020022           77 EACTGVNIAVMVGGFPRK-E--GME---RKDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~-~--~~~---r~~~~~~n~~i~~~i~~~i~~~~---~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      +.+...|++|+++|.... +  ..+   ....+..|+.....+.+.+..+.   .+++.++++|.....         .+
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~---------~~  146 (257)
T PRK07067         76 ERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR---------RG  146 (257)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC---------CC
Confidence            223468999999986431 1  112   23446677766666665554321   123566676653221         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .+..-.++.++..-..+.+.+++.+.  +.+++
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  177 (257)
T PRK07067        147 EALVSHYCATKAAVISYTQSAALALI--RHGIN  177 (257)
T ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhc--ccCeE
Confidence            23223455555555566666776653  34554

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.93  E-value=3.8e-05  Score=68.60  Aligned_cols=124  Identities=19%  Similarity=0.140  Sum_probs=69.9

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChh
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV   76 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~   76 (332)
                      |++ +.++|.|+||+|++|.+++..|+..|.       ++.+++++.. +.++....++......   ...++....+..
T Consensus         1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~-------~V~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~   72 (248)
T PRK07806          1 MGDLPGKTALVTGSSRGIGADTAKILAGAGA-------HVVVNYRQKA-PRANKVVAEIEAAGGRASAVGADLTDEESVA   72 (248)
T ss_pred             CCCCCCcEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCch-HhHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            553 457899999999999999999998763       6788877632 2222222223221100   000111111111


Q ss_pred             hh-------cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           77 EA-------CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        77 ~a-------l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      .+       +.+.|+||+.+|.......+....+..|......+.+.+.++..+.++++++|.
T Consensus        73 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         73 ALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             HHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            11       236899999988643222233344566777777777777665433346666654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.92  E-value=3.9e-05  Score=65.30  Aligned_cols=97  Identities=21%  Similarity=0.255  Sum_probs=64.1

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEE
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVM   87 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~   87 (332)
                      |+|+||+|++|+.++..|+..+.       +|+++-+++  +++..     .........++.-.....++++++|.||+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-------~V~~~~R~~--~~~~~-----~~~~~~~~~d~~d~~~~~~al~~~d~vi~   66 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-------EVTALVRSP--SKAED-----SPGVEIIQGDLFDPDSVKAALKGADAVIH   66 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-------EEEEEESSG--GGHHH-----CTTEEEEESCTTCHHHHHHHHTTSSEEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-------EEEEEecCc--hhccc-----ccccccceeeehhhhhhhhhhhhcchhhh
Confidence            78999999999999999999872       788888774  33221     00000000011111235788999999999


Q ss_pred             eCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           88 VGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        88 ~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      ++|.+.+           ..+.++.+.+.+++...+  +++++|
T Consensus        67 ~~~~~~~-----------~~~~~~~~~~a~~~~~~~--~~v~~s   97 (183)
T PF13460_consen   67 AAGPPPK-----------DVDAAKNIIEAAKKAGVK--RVVYLS   97 (183)
T ss_dssp             CCHSTTT-----------HHHHHHHHHHHHHHTTSS--EEEEEE
T ss_pred             hhhhhcc-----------cccccccccccccccccc--cceeee
Confidence            9876543           167788899988887533  555555

...

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.90  E-value=0.00012  Score=70.95  Aligned_cols=108  Identities=17%  Similarity=0.142  Sum_probs=67.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--------------ccceE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------LKGVV   70 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--------------~~~~~   70 (332)
                      ++||+||| .|.||..+|..|+..|.       ++..+|+++  ++++.    +.....+.              ...+.
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~-------~V~~~D~~~--~~v~~----l~~g~~~~~e~~l~~~l~~~~~~g~l~   68 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQK-------QVIGVDINQ--HAVDT----INRGEIHIVEPDLDMVVKTAVEGGYLR   68 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCC-------EEEEEeCCH--HHHHH----HHCCCCCcCCCCHHHHHHHHhhcCcee
Confidence            57999999 79999999999998763       799999985  44432    11111110              11233


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-Ccccc
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANT  136 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~  136 (332)
                      .+++    +++||+||++...|...+.      ..++..+.+.++.|.++.+++.+||+-| .|...
T Consensus        69 ~~~~----~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgt  125 (415)
T PRK11064         69 ATTT----PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGA  125 (415)
T ss_pred             eecc----cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCH
Confidence            3332    3589999999887754332      1234445555666666655666665554 46554

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=97.89  E-value=2.9e-05  Score=69.73  Aligned_cols=170  Identities=13%  Similarity=0.043  Sum_probs=97.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .++||+|+||+||||||++..|+..+  .     +|...|.--     .+....+.+........+....-...-+..+|
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~eg--h-----~VIa~Dn~f-----tg~k~n~~~~~~~~~fel~~hdv~~pl~~evD   93 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEG--H-----EVIALDNYF-----TGRKENLEHWIGHPNFELIRHDVVEPLLKEVD   93 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcC--C-----eEEEEeccc-----ccchhhcchhccCcceeEEEeechhHHHHHhh
Confidence            35899999999999999999999876  2     788888653     22333344443222223344433445678999


Q ss_pred             EEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch-----HHHHHHhCCC---CCCCcE
Q 020022           84 IAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN-----ALILKEFAPS---IPAKNI  153 (332)
Q Consensus        84 iVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~-----~~~~~~~~~~---~~~~~i  153 (332)
                      -|+++|.....++  .+..+....|.--........++..   ++++..|.. .+-     ......+.+.   +.++--
T Consensus        94 ~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~---aR~l~aSTs-eVYgdp~~hpq~e~ywg~vnpigpr~c  169 (350)
T KOG1429|consen   94 QIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARFLLASTS-EVYGDPLVHPQVETYWGNVNPIGPRSC  169 (350)
T ss_pred             hhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC---ceEEEeecc-cccCCcccCCCccccccccCcCCchhh
Confidence            9999876433222  3333445556555555555555554   567666532 110     0000000000   122223


Q ss_pred             EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          154 TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       154 ~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      +.-...-+.+|.+...+..|+...=.+.+..+|..+
T Consensus       170 ydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm  205 (350)
T KOG1429|consen  170 YDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM  205 (350)
T ss_pred             hhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc
Confidence            444566667888888888888665555555556433

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.88  E-value=0.00026  Score=64.57  Aligned_cols=114  Identities=13%  Similarity=0.029  Sum_probs=64.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE--ee--CChhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV--AT--TDAVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~--~~--~~~~~a-   78 (332)
                      ++++|.|+||+|++|++++..|+..|.       +|+++++++  +.++.    +..........+.  .+  ....++ 
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~----l~~~~~~~~~~~~~D~~d~~~~~~~~   69 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-------RVVGTVRSE--AARAD----FEALHPDRALARLLDVTDFDAIDAVV   69 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-------EEEEEeCCH--HHHHH----HHhhcCCCeeEEEccCCCHHHHHHHH
Confidence            456899999999999999999998763       789999874  22221    1111000000001  10  011122 


Q ss_pred             ------cCCCcEEEEeCCCCCC---CCCCHH---HHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecC
Q 020022           79 ------CTGVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQASAL----EQHAAPNCKVLVVAN  132 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~---~~~~r~---~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tN  132 (332)
                            +...|+||++||....   ...+..   ..+..|+.-...+.+.+    ++..  ...+|++|.
T Consensus        70 ~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--~~~iv~iSS  137 (277)
T PRK06180         70 ADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR--RGHIVNITS  137 (277)
T ss_pred             HHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC--CCEEEEEec
Confidence                  2358999999997431   112332   34667776655555554    3332  245667664

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.87  E-value=0.00016  Score=68.76  Aligned_cols=110  Identities=15%  Similarity=0.218  Sum_probs=68.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh--hhc------CCccceEeeCCh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD--AAF------PLLKGVVATTDA   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~--~~~------~~~~~~~~~~~~   75 (332)
                      ..+||+|+| +|..|+++|..|...+.......-++.|+.+++.- .-+..+.++++  ...      .+..++..++|.
T Consensus        10 ~~~ki~ViG-aG~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~-~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl   87 (365)
T PTZ00345         10 GPLKVSVIG-SGNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIV-EGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDL   87 (365)
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHhcCCcccCCCCeEEEEEecccc-cchHHHHHHHhcCCCcccCCCCcCCCceEEecCH
Confidence            457999999 69999999999997652000000178899887420 01112233332  111      234678888898


Q ss_pred             hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHh--hcCCCeEEEEec
Q 020022           76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQ--HAAPNCKVLVVA  131 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~--~~~~~~~viv~t  131 (332)
                      .+++++||+||++.  |              ...++++++.+..  +-++++.+|.++
T Consensus        88 ~eav~~aDiIvlAV--P--------------sq~l~~vl~~l~~~~~l~~~~~iIS~a  129 (365)
T PTZ00345         88 KEAVEDADLLIFVI--P--------------HQFLESVLSQIKENNNLKKHARAISLT  129 (365)
T ss_pred             HHHHhcCCEEEEEc--C--------------hHHHHHHHHHhccccccCCCCEEEEEe
Confidence            89999999999883  1              2446677777765  433444455444

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.87  E-value=0.00021  Score=64.19  Aligned_cols=154  Identities=19%  Similarity=0.171  Sum_probs=81.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh--
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA--   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a--   78 (332)
                      .+++.|+||+|++|++++..|+..|.       +|+++++++  +.......++.+.... ...+... ++   ..++  
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~   76 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGA-------AVAIADLNQ--DGANAVADEINKAGGK-AIGVAMDVTNEDAVNAGID   76 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHhcCce-EEEEECCCCCHHHHHHHHH
Confidence            57899999999999999999998764       688999874  3333222333221100 0001110 01   1111  


Q ss_pred             -----cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           79 -----CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        79 -----l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                           ....|+||+++|.....   ..+   .++.+..|+..    .+.+.+.+.+.+ +...++++|.-..       .
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~ss~~~-------~  148 (262)
T PRK13394         77 KVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMGSVHS-------H  148 (262)
T ss_pred             HHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEcchhh-------c
Confidence                 23589999999874311   111   23445567665    666666662323 2345666653111       1


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.+....++.+......+-+.+++.+  .+..++
T Consensus       149 --~~~~~~~~y~~sk~a~~~~~~~la~~~--~~~~i~  181 (262)
T PRK13394        149 --EASPLKSAYVTAKHGLLGLARVLAKEG--AKHNVR  181 (262)
T ss_pred             --CCCCCCcccHHHHHHHHHHHHHHHHHh--hhcCeE
Confidence              122323345555544444555566553  234555

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=97.87  E-value=0.00032  Score=68.20  Aligned_cols=111  Identities=12%  Similarity=0.122  Sum_probs=68.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC----------ccceEeeC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL----------LKGVVATT   73 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~----------~~~~~~~~   73 (332)
                      .+|||+||| .|.||..++..|+. +.       ++..||+++  ++.    ..+.....+.          ..++..++
T Consensus         5 ~~mkI~vIG-lGyvGlpmA~~la~-~~-------~V~g~D~~~--~~v----e~l~~G~~~~~e~~~~~l~~~g~l~~t~   69 (425)
T PRK15182          5 DEVKIAIIG-LGYVGLPLAVEFGK-SR-------QVVGFDVNK--KRI----LELKNGVDVNLETTEEELREARYLKFTS   69 (425)
T ss_pred             CCCeEEEEC-cCcchHHHHHHHhc-CC-------EEEEEeCCH--HHH----HHHHCcCCCCCCCCHHHHHhhCCeeEEe
Confidence            568999999 89999999998775 32       799999985  333    2333222211          12345555


Q ss_pred             ChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccc
Q 020022           74 DAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANT  136 (332)
Q Consensus        74 ~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~  136 (332)
                      +. +++++||++|++.+.|.+...+      ..+..+..-.+.|.++..++..||+- |-|...
T Consensus        70 ~~-~~~~~advvii~Vptp~~~~~~------~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgt  126 (425)
T PRK15182         70 EI-EKIKECNFYIITVPTPINTYKQ------PDLTPLIKASETVGTVLNRGDIVVYESTVYPGC  126 (425)
T ss_pred             CH-HHHcCCCEEEEEcCCCCCCCCC------cchHHHHHHHHHHHHhcCCCCEEEEecCCCCcc
Confidence            44 5789999999999888543211      12233334444555554455555554 445543

>PRK05865 hypothetical protein; Provisional

Probab=97.86  E-value=0.00011  Score=76.74  Aligned_cols=105  Identities=14%  Similarity=0.154  Sum_probs=69.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||.|+||+|++|++++..|+..|.       +++++|++.. .....      ... ....++.-..+..++++++|+|
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~-------~Vv~l~R~~~-~~~~~------~v~-~v~gDL~D~~~l~~al~~vD~V   65 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGH-------EVVGIARHRP-DSWPS------SAD-FIAADIRDATAVESAMTGADVV   65 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCch-hhccc------Cce-EEEeeCCCHHHHHHHHhCCCEE
Confidence            4899999999999999999998763       7888887631 11100      000 0000111112345678899999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      |++|+....       ....|+.....+++.+++.+.  .++|++|.+.
T Consensus        66 VHlAa~~~~-------~~~vNv~GT~nLLeAa~~~gv--kr~V~iSS~~  105 (854)
T PRK05865         66 AHCAWVRGR-------NDHINIDGTANVLKAMAETGT--GRIVFTSSGH  105 (854)
T ss_pred             EECCCcccc-------hHHHHHHHHHHHHHHHHHcCC--CeEEEECCcH
Confidence            999975421       356788888999999888753  3577777664

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.86  E-value=0.00029  Score=63.68  Aligned_cols=160  Identities=14%  Similarity=0.099  Sum_probs=82.4

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh---
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV---   76 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~---   76 (332)
                      |.. +.+++.|+||+|.+|.+++..|+..|.       +|.+.|++.  +.++....++.........++....+..   
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   71 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGA-------RVAIVDIDA--DNGAAVAASLGERARFIATDITDDAAIERAV   71 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCeeEEEEecCCCHHHHHHHH
Confidence            553 457999999999999999999998774       789999874  2232222221100000000110011111   


Q ss_pred             ----hhcCCCcEEEEeCCCCCCC--CCCH---HHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCcccchHHHHHHhCC
Q 020022           77 ----EACTGVNIAVMVGGFPRKE--GMER---KDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        77 ----~al~~aDiVi~~ag~~~~~--~~~r---~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                          +.+...|++|+.+|.....  ..+.   ...+..|+...-.+.+.+..+. .+...+|++|.-...         .
T Consensus        72 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~---------~  142 (261)
T PRK08265         72 ATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAK---------F  142 (261)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhc---------c
Confidence                2234679999999874322  2222   2344556654444443333221 133566666642221         1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.+..-.++.+..--..+.+.++..+.  +..|+
T Consensus       143 ~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  174 (261)
T PRK08265        143 AQTGRWLYPASKAAIRQLTRSMAMDLA--PDGIR  174 (261)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhc--ccCEE
Confidence            122222345555444566666776654  35666

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=97.85  E-value=0.00015  Score=67.65  Aligned_cols=110  Identities=25%  Similarity=0.199  Sum_probs=62.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhc
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al   79 (332)
                      |.+++|||+|+| +|.||..++..|...|.       ++.++.+++ .+........+..... .....+...+. .++.
T Consensus         1 ~~~~~m~I~IiG-~GaiG~~lA~~L~~~g~-------~V~~~~r~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~   70 (313)
T PRK06249          1 MDSETPRIGIIG-TGAIGGFYGAMLARAGF-------DVHFLLRSD-YEAVRENGLQVDSVHGDFHLPPVQAYRS-AEDM   70 (313)
T ss_pred             CCCcCcEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEEeCC-HHHHHhCCeEEEeCCCCeeecCceEEcc-hhhc
Confidence            777889999999 69999999999998763       788998864 2211111011100000 00111223333 2356


Q ss_pred             CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      ..+|+||++.-...                ..+.++.+.....++..++...|=++.
T Consensus        71 ~~~D~vilavK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~  111 (313)
T PRK06249         71 PPCDWVLVGLKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGV  111 (313)
T ss_pred             CCCCEEEEEecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCc
Confidence            78999999853221                123333444444456667777886653

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.85  E-value=0.00016  Score=67.82  Aligned_cols=104  Identities=11%  Similarity=0.210  Sum_probs=64.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh----cCCccceEeeCChhhhc-C
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----FPLLKGVVATTDAVEAC-T   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~----~~~~~~~~~~~~~~~al-~   80 (332)
                      |||+|+| +|.+|++++..|...+.       +|.|+++++  +..+....+-.+..    .....++..+++..+++ .
T Consensus         1 MkI~IiG-aGa~G~ala~~L~~~g~-------~V~l~~r~~--~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   70 (326)
T PRK14620          1 MKISILG-AGSFGTAIAIALSSKKI-------SVNLWGRNH--TTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSD   70 (326)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEecCH--HHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhC
Confidence            4899999 69999999999998763       789999863  33322211100111    11223566677777776 5


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHh-hcCCCeEEEEecCccc
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQ-HAAPNCKVLVVANPAN  135 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~-~~~~~~~viv~tNP~~  135 (332)
                      ++|+||++.-                ...++++++.+.. +-.++..++..+|=.+
T Consensus        71 ~~Dliiiavk----------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~  110 (326)
T PRK14620         71 NATCIILAVP----------------TQQLRTICQQLQDCHLKKNTPILICSKGIE  110 (326)
T ss_pred             CCCEEEEEeC----------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCee
Confidence            8999999841                1224455555554 4335566777787653

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=97.85  E-value=0.00022  Score=65.98  Aligned_cols=106  Identities=18%  Similarity=0.222  Sum_probs=61.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH---HHhhhhcCCccceEeeCChhhhcCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM---ELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~---dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      |||+|+| +|.+|+.++..|...|.       ++.++|+++  +.++....   .+.+..  ........++..+ ++++
T Consensus         1 m~I~IiG-~G~~G~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~-~~~~   67 (304)
T PRK06522          1 MKIAILG-AGAIGGLFGAALAQAGH-------DVTLVARRG--AHLDALNENGLRLEDGE--ITVPVLAADDPAE-LGPQ   67 (304)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCh--HHHHHHHHcCCcccCCc--eeecccCCCChhH-cCCC
Confidence            4899999 69999999999998762       799999853  22321111   000000  0011112233434 4899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                      |+||++....                -..++++.+..+-.++..|+...|.++....+
T Consensus        68 d~vila~k~~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~~l  109 (304)
T PRK06522         68 DLVILAVKAY----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLEEL  109 (304)
T ss_pred             CEEEEecccc----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHHHH
Confidence            9999985321                12344445554433556778888987654433

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.84  E-value=0.00024  Score=63.12  Aligned_cols=157  Identities=16%  Similarity=0.230  Sum_probs=79.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~-------   76 (332)
                      +.+++.|+||+|++|+.++..|+..|.       .+.+.+++.  +.++....++.........++.......       
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-------IVGLHGTRV--EKLEALAAELGERVKIFPANLSDRDEVKALGQKAE   75 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            457999999999999999999998763       577887763  3333222221100000000000000111       


Q ss_pred             hhcCCCcEEEEeCCCCCCC---CC---CHHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHHHHhCCCC
Q 020022           77 EACTGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~---~~---~r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      +.+...|+||+++|.....   ..   +....+..|+.....+++.+.+..  .+...++++|.....         .+.
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~  146 (245)
T PRK12936         76 ADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV---------TGN  146 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC---------cCC
Confidence            1235689999999975321   11   223445666665444444433210  123457777754331         122


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      |....++.+......+.+.+++.+.  +..++
T Consensus       147 ~~~~~Y~~sk~a~~~~~~~la~~~~--~~~i~  176 (245)
T PRK12936        147 PGQANYCASKAGMIGFSKSLAQEIA--TRNVT  176 (245)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhh--HhCeE
Confidence            2222344444444455556666543  23454

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=97.83  E-value=8.8e-05  Score=67.80  Aligned_cols=96  Identities=19%  Similarity=0.326  Sum_probs=66.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC--cE
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV--NI   84 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a--Di   84 (332)
                      ||.|+||+|++|++++..|+..|.       +++++++..         .|+.+..           ...++++++  |+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~-------~v~~~~r~~---------~d~~~~~-----------~~~~~~~~~~~d~   53 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGR-------VVVALTSSQ---------LDLTDPE-----------ALERLLRAIRPDA   53 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCC-------EEEEeCCcc---------cCCCCHH-----------HHHHHHHhCCCCE
Confidence            689999999999999999988753       788887641         2332221           234555555  99


Q ss_pred             EEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ||++++.....  .......+..|+.....+++.+.+.. .  ++|++|.
T Consensus        54 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--~~v~~Ss  100 (287)
T TIGR01214        54 VVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A--RLVHIST  100 (287)
T ss_pred             EEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEee
Confidence            99999865322  12345667889999999999887764 2  4555553

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.82  E-value=0.00013  Score=65.79  Aligned_cols=39  Identities=31%  Similarity=0.313  Sum_probs=33.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |+++.+++.|+||+|.+|++++..|+..|.       +|.+.|+++
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~   39 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGA-------RVAVLDKSA   39 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            766678999999999999999999998764       789999874

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05717 oxidoreductase; Validated

Probab=97.81  E-value=0.00014  Score=65.46  Aligned_cols=150  Identities=16%  Similarity=0.114  Sum_probs=81.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------hh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------EA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~-------~a   78 (332)
                      ++|.|+||+|++|++++..|+..|.       ++.++|++.  +.+.....++.........++....+..       +.
T Consensus        11 k~vlItG~sg~IG~~~a~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (255)
T PRK05717         11 RVALVTGAARGIGLGIAAWLIAEGW-------QVVLADLDR--ERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQ   81 (255)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            6899999999999999999998763       789998764  2222111111100000000110000111       11


Q ss_pred             cCCCcEEEEeCCCCCCC-----CCC---HHHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCcccchHHHHHHhCCCCC
Q 020022           79 CTGVNIAVMVGGFPRKE-----GME---RKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPSIP  149 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~-----~~~---r~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~~~~~~~~~~  149 (332)
                      +...|++|+.+|.....     ..+   ....+..|+.....+.+.+.++. .+.+.+|++|.....         .+.+
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~---------~~~~  152 (255)
T PRK05717         82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR---------QSEP  152 (255)
T ss_pred             hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc---------CCCC
Confidence            23579999999975321     112   23456777776666666665421 122456676643221         1112


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcC
Q 020022          150 AKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      ..-.++.++.--..+.+.+++.++
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~~~~  176 (255)
T PRK05717        153 DTEAYAASKGGLLALTHALAISLG  176 (255)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhc
Confidence            122456666655677777888776

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=97.81  E-value=0.00011  Score=67.78  Aligned_cols=151  Identities=14%  Similarity=0.139  Sum_probs=89.1

Q ss_pred             EEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--CCcEEE
Q 020022            9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVNIAV   86 (332)
Q Consensus         9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~aDiVi   86 (332)
                      .|+||+|++|++++..|+..+.       ++.+.....        ..|+.+..           +..+.++  +.|+||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~-------~v~~~~~~~--------~~Dl~~~~-----------~l~~~~~~~~~d~Vi   54 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGF-------TNLVLRTHK--------ELDLTRQA-----------DVEAFFAKEKPTYVI   54 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCC-------cEEEeeccc--------cCCCCCHH-----------HHHHHHhccCCCEEE
Confidence            3899999999999999987652       334443221        12333221           1223333  579999


Q ss_pred             EeCCCCCC---CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH----HHHHHh--CCC-CCCCc-EEE
Q 020022           87 MVGGFPRK---EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEF--APS-IPAKN-ITC  155 (332)
Q Consensus        87 ~~ag~~~~---~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~----~~~~~~--~~~-~~~~~-i~~  155 (332)
                      ++|+....   ......++...|.....++++.+++...+  ++|+.|.- .+-.    .-..+-  ..+ ..+.. .++
T Consensus        55 h~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~--~~i~~SS~-~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~  131 (306)
T PLN02725         55 LAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVK--KLLFLGSS-CIYPKFAPQPIPETALLTGPPEPTNEWYA  131 (306)
T ss_pred             EeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCC--eEEEeCce-eecCCCCCCCCCHHHhccCCCCCCcchHH
Confidence            99986421   12334567788999999999999987532  45555441 1100    000000  000 11112 356


Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      .++....++...+.+..+++...++...|+|.+
T Consensus       132 ~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        132 IAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPH  164 (306)
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEEecceeCCC
Confidence            666666666666667778888888877788864

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.80  E-value=0.00026  Score=63.35  Aligned_cols=153  Identities=15%  Similarity=0.127  Sum_probs=78.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCCh-------hhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA-------VEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~-------~~a   78 (332)
                      |+|.|+||+|++|.+++..|+..|.       ++.++++++  +.+......+.........++.-..+.       .+.
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   71 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGH-------KVIATGRRQ--ERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE   71 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4899999999999999999998763       789999874  333221111110000000011000111       122


Q ss_pred             cCCCcEEEEeCCCCC--CC--CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           79 CTGVNIAVMVGGFPR--KE--GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        79 l~~aDiVi~~ag~~~--~~--~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      +.+.|+||+++|...  .+  ..+.+   ..+..|+..    .+.+.+.+.+..  ...++++|.....         .+
T Consensus        72 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~---------~~  140 (248)
T PRK10538         72 WRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN--HGHIINIGSTAGS---------WP  140 (248)
T ss_pred             cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEECCcccC---------CC
Confidence            347999999998742  11  12332   345566555    444455454432  2456677653221         11


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ++....++.+..-...+...++..++  +..|+
T Consensus       141 ~~~~~~Y~~sK~~~~~~~~~l~~~~~--~~~i~  171 (248)
T PRK10538        141 YAGGNVYGATKAFVRQFSLNLRTDLH--GTAVR  171 (248)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhc--CCCcE
Confidence            22222344444443455556666554  34454

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.78  E-value=0.0012  Score=58.40  Aligned_cols=120  Identities=15%  Similarity=0.157  Sum_probs=65.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chh--
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAV--   76 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~--   76 (332)
                      ++.++|.|+||+|.+|++++..|+..|.       +|.++++++  +.+.....++...  .....+... +   +..  
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~--~~~~~~~~D~~~~~~~~~~   72 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGY-------KVAITARDQ--KELEEAAAELNNK--GNVLGLAADVRDEADVQRA   72 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEeeCCH--HHHHHHHHHHhcc--CcEEEEEccCCCHHHHHHH
Confidence            3457899999999999999999987653       788999874  3333222333211  000011111 1   111  


Q ss_pred             -----hhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCc
Q 020022           77 -----EACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHA-APNCKVLVVANP  133 (332)
Q Consensus        77 -----~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP  133 (332)
                           +.+..+|+||+.+|.....   ..+.+   +.+..|+.....+.+.+.+.. .+...++++|..
T Consensus        73 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (237)
T PRK07326         73 VDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL  141 (237)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence                 2234789999999865321   12222   345556654444444443321 123456666653

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.78  E-value=0.00029  Score=66.15  Aligned_cols=78  Identities=28%  Similarity=0.315  Sum_probs=51.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh----hcCCccceEeeCChh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA----AFPLLKGVVATTDAV   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~----~~~~~~~~~~~~~~~   76 (332)
                      |+. +|||+||| +|.+|+.++..|+..|.       +|+++|+++  +..+.....-.+.    ......++..+++..
T Consensus         1 ~~~-~m~I~iIG-~G~mG~~ia~~L~~~G~-------~V~~~~r~~--~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~   69 (328)
T PRK14618          1 MHH-GMRVAVLG-AGAWGTALAVLAASKGV-------PVRLWARRP--EFAAALAAERENREYLPGVALPAELYPTADPE   69 (328)
T ss_pred             CCC-CCeEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHhCcccccCCCCcCCCCeEEeCCHH
Confidence            544 46999999 69999999999998763       799999974  3332221110000    011122355666777


Q ss_pred             hhcCCCcEEEEeC
Q 020022           77 EACTGVNIAVMVG   89 (332)
Q Consensus        77 ~al~~aDiVi~~a   89 (332)
                      ++++++|+||++.
T Consensus        70 e~~~~aD~Vi~~v   82 (328)
T PRK14618         70 EALAGADFAVVAV   82 (328)
T ss_pred             HHHcCCCEEEEEC
Confidence            8889999999984

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.77  E-value=0.00028  Score=63.39  Aligned_cols=156  Identities=17%  Similarity=0.160  Sum_probs=81.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh-----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV-----   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~-----   76 (332)
                      .++|.|+||+|++|..++..|+..|.       +|++.|+++  +.++.....+.+.....   ..++.-..+..     
T Consensus        10 ~k~vlItGa~g~iG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (255)
T PRK07523         10 GRRALVTGSSQGIGYALAEGLAQAGA-------EVILNGRDP--AKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA   80 (255)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence            36999999999999999999998764       789999874  33333222232210000   00110000111     


Q ss_pred             --hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcC--CCeEEEEecCcccchHHHHHHhCC
Q 020022           77 --EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        77 --~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~--~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                        +.+...|+||+.+|.....   ..+   ....+..|+.....+.+.+.++..  +.++++++|.....         .
T Consensus        81 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~---------~  151 (255)
T PRK07523         81 FEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA---------L  151 (255)
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc---------c
Confidence              2234579999999875321   112   234456776655555555544321  13567777654221         1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.+....++.+......+-+.++..+.  +.+++
T Consensus       152 ~~~~~~~y~~sK~a~~~~~~~~a~e~~--~~gi~  183 (255)
T PRK07523        152 ARPGIAPYTATKGAVGNLTKGMATDWA--KHGLQ  183 (255)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhh--HhCeE
Confidence            122222344444444455555665543  33454

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00036  Score=63.39  Aligned_cols=121  Identities=17%  Similarity=0.054  Sum_probs=69.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC------
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD------   74 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~------   74 (332)
                      |+++.++|.|+||+|.+|..++..|+..|.       .+.+.++++  +.++....++..... ...++.-..+      
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~   70 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGA-------RVAIGDLDE--ALAKETAAELGLVVG-GPLDVTDPASFAAFLD   70 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhccceE-EEccCCCHHHHHHHHH
Confidence            666778999999999999999999998764       688888874  333322222211100 0000000001      


Q ss_pred             -hhhhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           75 -AVEACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        75 -~~~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                       ..+...+.|++|+.+|.....   ..+   ....+..|+.    ..+.+.+.+.+..  .+.|+++|.-
T Consensus        71 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~g~iv~isS~  138 (273)
T PRK07825         71 AVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG--RGHVVNVASL  138 (273)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEEcCc
Confidence             122235689999999975321   112   2234556664    4455556555543  2467777643

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.76  E-value=0.00023  Score=62.98  Aligned_cols=121  Identities=22%  Similarity=0.198  Sum_probs=67.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh-
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV-   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~-   76 (332)
                      |.++.++|.|+||+|++|..++..|+..|.       ++.++++++  +.++....++.......   ..++.-..... 
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   71 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGA-------KVVIYDSNE--EAAEALAAELRAAGGEARVLVFDVSDEAAVRA   71 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            666668999999999999999999998763       689999874  33322222222110000   00000000111 


Q ss_pred             ------hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecC
Q 020022           77 ------EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVAN  132 (332)
Q Consensus        77 ------~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tN  132 (332)
                            +.+...|.||+.+|.....   ..+.   .+.+..|+.....+.+.+.    +.. . .+++++|.
T Consensus        72 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~-~~ii~~ss  141 (246)
T PRK05653         72 LIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-Y-GRIVNISS  141 (246)
T ss_pred             HHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C-cEEEEECc
Confidence                  1234569999998864321   1222   2345566666655555553    333 2 35666663

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.75  E-value=0.0011  Score=58.64  Aligned_cols=158  Identities=16%  Similarity=0.184  Sum_probs=100.4

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cCCccceEee------
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPLLKGVVAT------   72 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~~~~~~~~~------   72 (332)
                      |+. +.+-+.|+||++.+|.+++..|++.|.       .++|..++.  ++|+..+.++.+.. .+....++-.      
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~-------~vvl~aRR~--drL~~la~~~~~~~~~~~~~DVtD~~~~~~~   71 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGA-------KVVLAARRE--ERLEALADEIGAGAALALALDVTDRAAVEAA   71 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEeccH--HHHHHHHHhhccCceEEEeeccCCHHHHHHH
Confidence            544 345678999999999999999999875       799999984  78887777776411 1111122111      


Q ss_pred             -CChhhhcCCCcEEEEeCCCCCCCC------CCHHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           73 -TDAVEACTGVNIAVMVGGFPRKEG------MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        73 -~~~~~al~~aDiVi~~ag~~~~~~------~~r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                       ....+.+...|++|..||..+-..      .++...+..|+.-    ++.+.+.+.+..  .+.||+++.=..      
T Consensus        72 i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~--~G~IiN~~SiAG------  143 (246)
T COG4221          72 IEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK--SGHIINLGSIAG------  143 (246)
T ss_pred             HHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC--CceEEEeccccc------
Confidence             113445668999999999864311      1345566778754    455566666653  457888875332      


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       ++  -||-..++++|+--..-|...|-+.+.  ..+|+
T Consensus       144 -~~--~y~~~~vY~ATK~aV~~fs~~LR~e~~--g~~IR  177 (246)
T COG4221         144 -RY--PYPGGAVYGATKAAVRAFSLGLRQELA--GTGIR  177 (246)
T ss_pred             -cc--cCCCCccchhhHHHHHHHHHHHHHHhc--CCCee
Confidence             22  245556888887766555555544432  46666

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.75  E-value=0.00019  Score=63.96  Aligned_cols=153  Identities=14%  Similarity=0.153  Sum_probs=81.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC--------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD--------   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~--------   74 (332)
                      +.++|.|+||+|++|++++..|+..|.       ++.++++++  +.+.....++.. .   ...+... ++        
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~-~---~~~~~~D~~~~~~~~~~~   71 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-------RVAITGRDP--ASLEAARAELGE-S---ALVIRADAGDVAAQKALA   71 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCH--HHHHHHHHHhCC-c---eEEEEecCCCHHHHHHHH
Confidence            447999999999999999999998764       688998873  223221111110 0   0001110 11        


Q ss_pred             --hhhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           75 --AVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                        ..+.+...|+||+.+|.....   ..+.   ...+..|+.....+.+.+..+-.....+++++.....       +  
T Consensus        72 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~-------~--  142 (249)
T PRK06500         72 QALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH-------I--  142 (249)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc-------c--
Confidence              112235689999999875321   1122   3456777777777777666431112345555432221       1  


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.|....++.++.-...+-+.+++.+.  +..++
T Consensus       143 ~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  174 (249)
T PRK06500        143 GMPNSSVYAASKAALLSLAKTLSGELL--PRGIR  174 (249)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence            222222344455444455555665542  33454

>PLN02253 xanthoxin dehydrogenase

Probab=97.74  E-value=0.00048  Score=62.79  Aligned_cols=150  Identities=16%  Similarity=0.111  Sum_probs=81.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-CCccceEeeCChhhhc---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEAC---   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~~~~~~~~~~~~~~al---   79 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +++++|+++  +..+....++.... . ....++.......+++   
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   88 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGA-------KVCIVDLQD--DLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFT   88 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHH
Confidence            46899999999999999999998763       789999863  22222222221100 0 0000111111112222   


Q ss_pred             ----CCCcEEEEeCCCCCCC-----CCC---HHHHHHhhHHHHHH----HHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           80 ----TGVNIAVMVGGFPRKE-----GME---RKDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        80 ----~~aDiVi~~ag~~~~~-----~~~---r~~~~~~n~~i~~~----i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                          ...|++|+.||.....     ..+   ....+..|+.....    +.+.+.+..  .+.+++++.....       
T Consensus        89 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~ii~isS~~~~-------  159 (280)
T PLN02253         89 VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK--KGSIVSLCSVASA-------  159 (280)
T ss_pred             HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CceEEEecChhhc-------
Confidence                3689999999975321     112   23445667554444    344443322  3456666643221       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCC
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNV  174 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v  174 (332)
                      +  +.+....++.++.-...+-+.+++.++-
T Consensus       160 ~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~  188 (280)
T PLN02253        160 I--GGLGPHAYTGSKHAVLGLTRSVAAELGK  188 (280)
T ss_pred             c--cCCCCcccHHHHHHHHHHHHHHHHHhhh
Confidence            1  1122224666777667777888887764

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00049  Score=61.60  Aligned_cols=155  Identities=14%  Similarity=0.054  Sum_probs=81.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhhc-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEAC-   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~al-   79 (332)
                      +.++|.|+||+|.+|+.++..|+..|.       ++.++++++  +.++....++.......   ...+.-..+..+++ 
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   76 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-------KVVVADRDA--AGGEETVALIREAGGEALFVACDVTRDAEVKALVE   76 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            357999999999999999999998763       789999874  33333333332211000   00000001112222 


Q ss_pred             ------CCCcEEEEeCCCCCCC----CCCHH---HHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           80 ------TGVNIAVMVGGFPRKE----GMERK---DVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        80 ------~~aDiVi~~ag~~~~~----~~~r~---~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                            ...|+||+.+|.....    ..+.+   +.+..|+.-...+    .+.+.+..  ...++++|.....      
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~~sS~~~~------  148 (253)
T PRK06172         77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG--GGAIVNTASVAGL------  148 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEECchhhc------
Confidence                  3459999999974321    22332   3455666544333    34443332  2456666653221      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+....++.+......+-+.+++.+.  +.+++
T Consensus       149 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~  181 (253)
T PRK06172        149 ---GAAPKMSIYAASKHAVIGLTKSAAIEYA--KKGIR  181 (253)
T ss_pred             ---cCCCCCchhHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence               1122222345555544566667777663  45665

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.73  E-value=0.00028  Score=63.75  Aligned_cols=171  Identities=18%  Similarity=0.196  Sum_probs=100.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC----CccceEeeCC----
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVATTD----   74 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~----~~~~~~~~~~----   74 (332)
                      ++.+++.||||++.+|..+|..|+..|.       .+.|+.++  +++|+..+.++++...-    ...++....+    
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-------~liLvaR~--~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l   74 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-------NLILVARR--EDKLEALAKELEDKTGVEVEVIPADLSDPEALERL   74 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCc--HHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHH
Confidence            3557999999999999999999999874       79999998  47888888888764310    0011111111    


Q ss_pred             ---hhhhcCCCcEEEEeCCCCCCCC---C---CHHHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           75 ---AVEACTGVNIAVMVGGFPRKEG---M---ERKDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        75 ---~~~al~~aDiVi~~ag~~~~~~---~---~r~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                         +.+.....|+.|..||+..-..   .   +..+.+.-|+    ...+.+.+.+.+.. . +.||+++.-...     
T Consensus        75 ~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~-G~IiNI~S~ag~-----  147 (265)
T COG0300          75 EDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-A-GHIINIGSAAGL-----  147 (265)
T ss_pred             HHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C-ceEEEEechhhc-----
Confidence               1122236899999999864321   1   2345666676    45556667776654 3 567787743321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCC
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVN  197 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S  197 (332)
                        . +. |..-+++.|.---.-|...|...+  ....|+-.. +. .|...-..|.
T Consensus       148 --~-p~-p~~avY~ATKa~v~~fSeaL~~EL--~~~gV~V~~-v~-PG~~~T~f~~  195 (265)
T COG0300         148 --I-PT-PYMAVYSATKAFVLSFSEALREEL--KGTGVKVTA-VC-PGPTRTEFFD  195 (265)
T ss_pred             --C-CC-cchHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEE-Ee-cCcccccccc
Confidence              0 11 222244444444445555555555  456666332 23 3554445554

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00096  Score=59.71  Aligned_cols=155  Identities=14%  Similarity=0.112  Sum_probs=79.0

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcC---CccceEeeCCh
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA   75 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~   75 (332)
                      |++ +.++|.|+||+|++|++++..|+..|.       ++.+. +++.  +.++....++......   ...++....+.
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~-------~v~i~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i   71 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGA-------LVAIHYGRNK--QAADETIREIESNGGKAFLIEADLNSIDGV   71 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcCCcEEEEEcCcCCHHHH
Confidence            554 347999999999999999999998763       56554 4432  2332222222211000   00011101111


Q ss_pred             hhhc-------------CCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           76 VEAC-------------TGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        76 ~~al-------------~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      .+++             .+.|+||+++|......   .+.   ...+..|+...-.+.+.+.++..+...++++|.....
T Consensus        72 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~  151 (254)
T PRK12746         72 KKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR  151 (254)
T ss_pred             HHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc
Confidence            1111             25899999998753211   122   2344567776666666665543222356666543221


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                               .+.+..-.++.+..-...+-+.+++.++
T Consensus       152 ---------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~  179 (254)
T PRK12746        152 ---------LGFTGSIAYGLSKGALNTMTLPLAKHLG  179 (254)
T ss_pred             ---------CCCCCCcchHhhHHHHHHHHHHHHHHHh
Confidence                     1122222345555554555556666654

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.00052  Score=60.98  Aligned_cols=161  Identities=12%  Similarity=0.119  Sum_probs=82.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE   77 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~   77 (332)
                      |.-+.++|.|+||+|.+|++++..|+..|.       ++.+...+. +...+....++......   ...++.-..+..+
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGF-------AVAVNYAGS-AAAADELVAEIEAAGGRAIAVQADVADAAAVTR   72 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCC-HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            544567999999999999999999998764       566766543 22222222222211100   0001100111222


Q ss_pred             hc-------CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           78 AC-------TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        78 al-------~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      ++       .+.|+||+.+|.....   ..+   ....+..|+.....+.+.+.+...+..+++++|.....        
T Consensus        73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~--------  144 (245)
T PRK12937         73 LFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA--------  144 (245)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc--------
Confidence            22       3689999999975321   112   22345667665555555554432233466666642211        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.|....++.++.--..+.+.+++.++  +..++
T Consensus       145 -~~~~~~~~Y~~sK~a~~~~~~~~a~~~~--~~~i~  177 (245)
T PRK12937        145 -LPLPGYGPYAASKAAVEGLVHVLANELR--GRGIT  177 (245)
T ss_pred             -CCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence             1123222345555444455555666554  33454

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.00043  Score=62.07  Aligned_cols=145  Identities=11%  Similarity=0.088  Sum_probs=80.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh-----hHHHHhhhhcCCccceEeeCCh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-----VKMELVDAAFPLLKGVVATTDA   75 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~-----~~~dl~~~~~~~~~~~~~~~~~   75 (332)
                      |+.+.+++.|+||+|.+|++++..|+..|.       ++.+.+++.. ....+     ...|+.+.           .+.
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~-------~v~~~~r~~~-~~~~~~~~~~~~~D~~~~-----------~~~   62 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGA-------TVVVCGRRAP-ETVDGRPAEFHAADVRDP-----------DQV   62 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCChh-hhhcCCceEEEEccCCCH-----------HHH
Confidence            445568999999999999999999998763       7889998742 10000     01111110           111


Q ss_pred             hhh-------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhh---cCCCeEEEEecCcccchHH
Q 020022           76 VEA-------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        76 ~~a-------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~---~~~~~~viv~tNP~~~~~~  139 (332)
                      .++       +...|+||+.+|.....   ..+   ....+..|+.....+.+.+..+   ......+|++|.-...   
T Consensus        63 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~---  139 (252)
T PRK07856         63 AALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR---  139 (252)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC---
Confidence            222       24569999999864321   112   2344566666555555544332   1123567777653221   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                            .+.+....++.++.-...+.+.++..++
T Consensus       140 ------~~~~~~~~Y~~sK~a~~~l~~~la~e~~  167 (252)
T PRK07856        140 ------RPSPGTAAYGAAKAGLLNLTRSLAVEWA  167 (252)
T ss_pred             ------CCCCCCchhHHHHHHHHHHHHHHHHHhc
Confidence                  1122222455555555667777777765

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.71  E-value=0.00048  Score=61.53  Aligned_cols=159  Identities=13%  Similarity=0.085  Sum_probs=81.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc-
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-   79 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al-   79 (332)
                      |..+.++|.|+||+|++|++++..|+..|.       ++.+.+.+. .+.++....++.........++.-..+..+++ 
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~-------~vv~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGA-------RVVVNYHQS-EDAAEALADELGDRAIALQADVTDREQVQAMFA   72 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCC-------eEEEEcCCC-HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence            544557899999999999999999988763       566654432 12222111111100000000110001112222 


Q ss_pred             ------CC-CcEEEEeCCCCC-------C--CCCCHH---HHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcccc
Q 020022           80 ------TG-VNIAVMVGGFPR-------K--EGMERK---DVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        80 ------~~-aDiVi~~ag~~~-------~--~~~~r~---~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                            .. .|++|+.+|...       .  ...+.+   +.+..|+.....+    .+.+.+..  .+.+++++.....
T Consensus        73 ~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~  150 (253)
T PRK08642         73 TATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG--FGRIINIGTNLFQ  150 (253)
T ss_pred             HHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC--CeEEEEECCcccc
Confidence                  23 899999998631       1  112222   3455565544444    44443332  3567777653220


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                               ...++...++.++.....+-+.+++.++-  ..|+
T Consensus       151 ---------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~--~~i~  183 (253)
T PRK08642        151 ---------NPVVPYHDYTTAKAALLGLTRNLAAELGP--YGIT  183 (253)
T ss_pred             ---------CCCCCccchHHHHHHHHHHHHHHHHHhCc--cCeE
Confidence                     11122224666777777787888887653  4555

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00042  Score=62.97  Aligned_cols=160  Identities=13%  Similarity=0.053  Sum_probs=84.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-----ccceEeeCChhh
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----LKGVVATTDAVE   77 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-----~~~~~~~~~~~~   77 (332)
                      ++.++|.|+||+|++|++++..|+..|.       +|.++++++  +.++....++.......     ..++....+...
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~   75 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-------AVMIVGRNP--DKLAAAAEEIEALKGAGAVRYEPADVTDEDQVAR   75 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHH
Confidence            3458999999999999999999998764       789998864  33332323332110000     001100011112


Q ss_pred             hc-------CCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHH
Q 020022           78 AC-------TGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALIL  141 (332)
Q Consensus        78 al-------~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~  141 (332)
                      .+       ...|++|+.+|.....    ..+.   ...+..|......+.+.+.+..  .+...++++|....      
T Consensus        76 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~------  149 (276)
T PRK05875         76 AVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA------  149 (276)
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh------
Confidence            22       3679999999864221    1222   2334556655555544433321  12346666664221      


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV  182 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~  182 (332)
                       .  .+.|..-.++.++.....+.+.+++.++  +..++..
T Consensus       150 -~--~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~  185 (276)
T PRK05875        150 -S--NTHRWFGAYGVTKSAVDHLMKLAADELG--PSWVRVN  185 (276)
T ss_pred             -c--CCCCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEEE
Confidence             0  1112222456666655666677777665  3566633

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.69  E-value=0.00028  Score=63.48  Aligned_cols=154  Identities=12%  Similarity=0.102  Sum_probs=79.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhhhc-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC-   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~al-   79 (332)
                      +.++|.|+||+|.+|..++..|+..|.       .+.++++++..+.+   ...+.+....   ...++....+..+.+ 
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   83 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-------DIIITTHGTNWDET---RRLIEKEGRKVTFVQVDLTKPESAEKVVK   83 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCcHHHHH---HHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            347899999999999999999998764       68888876321111   1112111100   000111011111222 


Q ss_pred             ------CCCcEEEEeCCCCCC-C--CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           80 ------TGVNIAVMVGGFPRK-E--GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        80 ------~~aDiVi~~ag~~~~-~--~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                            ...|++|+++|.... +  ..+   .+..+..|+..    .+.+.+.+.+..  .+.++++|.....       
T Consensus        84 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~-------  154 (258)
T PRK06935         84 EALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG--SGKIINIASMLSF-------  154 (258)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC--CeEEEEECCHHhc-------
Confidence                  367999999987532 1  122   22344556554    344444444433  3567777653321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.+..-.++.++.....+-+.+++.++  +.+|+
T Consensus       155 --~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  187 (258)
T PRK06935        155 --QGGKFVPAYTASKHGVAGLTKAFANELA--AYNIQ  187 (258)
T ss_pred             --cCCCCchhhHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence              1111111344455555566677777665  34555

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.00017  Score=73.94  Aligned_cols=116  Identities=17%  Similarity=0.191  Sum_probs=68.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHh--cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEe-----eCChhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIAR--GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVA-----TTDAVE   77 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~--~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~-----~~~~~~   77 (332)
                      |||.|+||+|++|++++..|+.  .+.       +|++++++.....+......+.+... ....++.-     .....+
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~-------~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   73 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREA-------TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIA   73 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCC-------EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHH
Confidence            4899999999999999999984  321       78888886422222211100000000 00001100     011223


Q ss_pred             hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      .++++|+||++|+... ...+..+....|+...+.+++.+.+...+  .++.+|
T Consensus        74 ~l~~~D~Vih~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~--~~v~~S  124 (657)
T PRK07201         74 ELGDIDHVVHLAAIYD-LTADEEAQRAANVDGTRNVVELAERLQAA--TFHHVS  124 (657)
T ss_pred             HhcCCCEEEECceeec-CCCCHHHHHHHHhHHHHHHHHHHHhcCCC--eEEEEe
Confidence            3489999999998643 22344567788999999999998886432  455554

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.00086  Score=60.09  Aligned_cols=123  Identities=17%  Similarity=0.121  Sum_probs=68.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCCh--
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA--   75 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~--   75 (332)
                      |-+..++|.|+||+|++|++++..|+..|.       +|.++|+++  +.++....++......   ...++......  
T Consensus         1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   71 (258)
T PRK07890          1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGA-------DVVLAARTA--ERLDEVAAEIDDLGRRALAVPTDITDEDQCAN   71 (258)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHhCCceEEEecCCCCHHHHHH
Confidence            445667999999999999999999998774       789999874  3333333333211100   00011100111  


Q ss_pred             -----hhhcCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHHHhhcC-CCeEEEEecC
Q 020022           76 -----VEACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAA-PNCKVLVVAN  132 (332)
Q Consensus        76 -----~~al~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~-~~~~viv~tN  132 (332)
                           .+.+...|+||+.+|....  +  ..+.   ...+..|+.....+.+.+.++-. ....+|++|.
T Consensus        72 ~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS  141 (258)
T PRK07890         72 LVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS  141 (258)
T ss_pred             HHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence                 1223468999999987432  1  2222   33456666655555555544311 1135666664

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.0042  Score=56.21  Aligned_cols=154  Identities=14%  Similarity=0.197  Sum_probs=83.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc----cceEeeCChhhh--
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL----KGVVATTDAVEA--   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~----~~~~~~~~~~~a--   78 (332)
                      .+.+.|+||+|.+|.+++..|+..|.       +|.++|++.  +.++....++........    .++.-..+..+.  
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~   78 (263)
T PRK08339          8 GKLAFTTASSKGIGFGVARVLARAGA-------DVILLSRNE--ENLKKAREKIKSESNVDVSYIVADLTKREDLERTVK   78 (263)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            46789999999999999999998874       789999874  344333333322110000    011101111122  


Q ss_pred             ----cCCCcEEEEeCCCCCCC---CCCHH---HHHHhh----HHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           79 ----CTGVNIAVMVGGFPRKE---GMERK---DVMSKN----VSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        79 ----l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n----~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                          +...|++|+.+|.....   ..+.+   ..+..|    ...++.+.+.+++..  .+.||++|.....        
T Consensus        79 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~--~g~Ii~isS~~~~--------  148 (263)
T PRK08339         79 ELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG--FGRIIYSTSVAIK--------  148 (263)
T ss_pred             HHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CCEEEEEcCcccc--------
Confidence                23579999999875321   12333   334444    445677777776643  3567777653321        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.|..-.++.+.---..+-+.+++.+.  +..|+
T Consensus       149 -~~~~~~~~y~asKaal~~l~~~la~el~--~~gIr  181 (263)
T PRK08339        149 -EPIPNIALSNVVRISMAGLVRTLAKELG--PKGIT  181 (263)
T ss_pred             -CCCCcchhhHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence             1112111233344444566667777665  45565

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.0012  Score=60.22  Aligned_cols=163  Identities=17%  Similarity=0.144  Sum_probs=86.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh-----hhhhhHHHHhhhhcCC---ccceEee
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-----ALNGVKMELVDAAFPL---LKGVVAT   72 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-----~l~~~~~dl~~~~~~~---~~~~~~~   72 (332)
                      |.++.+++.|+||+|++|++++..|+..|.       ++++++++....     .++....++.......   ..++...
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~   74 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGA-------NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDE   74 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCH
Confidence            334457899999999999999999998764       788888864211     1111222222110000   0011111


Q ss_pred             CChhhh-------cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccch
Q 020022           73 TDAVEA-------CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTN  137 (332)
Q Consensus        73 ~~~~~a-------l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~  137 (332)
                      .+..+.       +...|+||+++|.....   ..+.+   ..+..|+.-...+.+.+..+-  ...+.++++|.+... 
T Consensus        75 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-  153 (273)
T PRK08278         75 DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL-  153 (273)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc-
Confidence            111122       23679999999974321   22322   334556554444444443221  123566666643321 


Q ss_pred             HHHHHHhCCC-CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          138 ALILKEFAPS-IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       138 ~~~~~~~~~~-~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                            . +. ++....++.++.-..++...+++.++  +.+|+
T Consensus       154 ------~-~~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~  188 (273)
T PRK08278        154 ------D-PKWFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIA  188 (273)
T ss_pred             ------c-ccccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence                  0 11 13233567777777788888888876  34565

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.69  E-value=0.00031  Score=65.39  Aligned_cols=80  Identities=11%  Similarity=0.184  Sum_probs=57.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..|||+|+| +|.+|++++..|...|.       +|.++|+++.                         .+..++++++|
T Consensus         3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~-------~V~~~~r~~~-------------------------~~~~~~~~~ad   49 (308)
T PRK14619          3 QPKTIAILG-AGAWGSTLAGLASANGH-------RVRVWSRRSG-------------------------LSLAAVLADAD   49 (308)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCC-------EEEEEeCCCC-------------------------CCHHHHHhcCC
Confidence            357999999 79999999999998763       7999998631                         23557788999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-cCCCeEEEEecC
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH-AAPNCKVLVVAN  132 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~~viv~tN  132 (332)
                      +||++.-                .+.++++++.+..+ ..++++++..|+
T Consensus        50 vvi~~vp----------------~~~~~~v~~~l~~~~~~~~~ivi~~s~   83 (308)
T PRK14619         50 VIVSAVS----------------MKGVRPVAEQVQALNLPPETIIVTATK   83 (308)
T ss_pred             EEEEECC----------------hHHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence            9999841                02344555666543 235666766676

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00059  Score=62.04  Aligned_cols=143  Identities=13%  Similarity=0.117  Sum_probs=76.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh-----
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV-----   76 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~-----   76 (332)
                      ++|.|+||+|++|++++..|+..|.       .+.+.++++  +.+..    +.........-+... ++   ..     
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-------~v~~~~r~~--~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~   69 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-------RVAATVRRP--DALDD----LKARYGDRLWVLQLDVTDSAAVRAVVDR   69 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHH----HHHhccCceEEEEccCCCHHHHHHHHHH
Confidence            5799999999999999999998763       688888763  22221    111100000000110 11   11     


Q ss_pred             --hhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           77 --EACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        77 --~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                        +.+.+.|+||+++|......   .+   ....+..|+.....+.+.+    ++.. . .++|++|.-...        
T Consensus        70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~-~~iv~~sS~~~~--------  139 (276)
T PRK06482         70 AFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-G-GRIVQVSSEGGQ--------  139 (276)
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-CEEEEEcCcccc--------
Confidence              12346799999999754221   12   2345567777666666665    4333 2 456666542110        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHc
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                       .+.|....++.++.-...+...+++.+
T Consensus       140 -~~~~~~~~Y~~sK~a~~~~~~~l~~~~  166 (276)
T PRK06482        140 -IAYPGFSLYHATKWGIEGFVEAVAQEV  166 (276)
T ss_pred             -cCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence             122322245555554455555666654

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.00067  Score=60.50  Aligned_cols=153  Identities=22%  Similarity=0.203  Sum_probs=80.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CCh-------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDA-------   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~-------   75 (332)
                      +.+++.|+||+|++|.+++..|+..|.       ++.++|+++  +.+.....++.+.... ...+... ++.       
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~   74 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-------SVVVADINA--EGAERVAKQIVADGGT-AIAVQVDVSDPDSAKAMA   74 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-EEEEEcCCCCHHHHHHHH
Confidence            457899999999999999999998763       789999874  2232222222211100 0011111 111       


Q ss_pred             ---hhhcCCCcEEEEeCCCCCC----C--CCCHH---HHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHH
Q 020022           76 ---VEACTGVNIAVMVGGFPRK----E--GMERK---DVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALIL  141 (332)
Q Consensus        76 ---~~al~~aDiVi~~ag~~~~----~--~~~r~---~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~  141 (332)
                         .+.+...|+||+++|....    +  ..+..   ..+..|......+.+.+..+.  .+...++++|.-..      
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~------  148 (250)
T PRK07774         75 DATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA------  148 (250)
T ss_pred             HHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc------
Confidence               1122468999999997421    1  12222   335566655555555544431  11346666663211      


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                            +++...++.+......+.+.+++.+.  ..+|+
T Consensus       149 ------~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~  179 (250)
T PRK07774        149 ------WLYSNFYGLAKVGLNGLTQQLARELG--GMNIR  179 (250)
T ss_pred             ------cCCccccHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence                  11112344455544556666666654  33555

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.66  E-value=0.00031  Score=65.92  Aligned_cols=96  Identities=23%  Similarity=0.313  Sum_probs=63.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .++|+|+||+|++|+.++..|+.. +. .     ++.++++++  +++.....++.+..        . .+..+++.++|
T Consensus       155 ~k~VLVtGAtG~IGs~lar~L~~~~gv-~-----~lilv~R~~--~rl~~La~el~~~~--------i-~~l~~~l~~aD  217 (340)
T PRK14982        155 KATVAVVGATGDIGSAVCRWLDAKTGV-A-----ELLLVARQQ--ERLQELQAELGGGK--------I-LSLEEALPEAD  217 (340)
T ss_pred             CCEEEEEccChHHHHHHHHHHHhhCCC-C-----EEEEEcCCH--HHHHHHHHHhcccc--------H-HhHHHHHccCC
Confidence            479999998899999999999753 32 2     789998863  44543333332111        1 24668899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      +||++++.+...-.+..++                  . +..+++=++.|=|+
T Consensus       218 iVv~~ts~~~~~~I~~~~l------------------~-~~~~viDiAvPRDV  251 (340)
T PRK14982        218 IVVWVASMPKGVEIDPETL------------------K-KPCLMIDGGYPKNL  251 (340)
T ss_pred             EEEECCcCCcCCcCCHHHh------------------C-CCeEEEEecCCCCC
Confidence            9999998764211222211                  2 34777778888774

>PRK08264 short chain dehydrogenase; Validated

Probab=97.65  E-value=0.00029  Score=62.49  Aligned_cols=151  Identities=21%  Similarity=0.148  Sum_probs=77.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh---
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE---   77 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~---   77 (332)
                      |+...++|.|+||+|.+|++++..|+..|. .     ++.++++++  +.+..    ..........++.-..+..+   
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~-~-----~V~~~~r~~--~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   69 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGA-A-----KVYAAARDP--ESVTD----LGPRVVPLQLDVTDPASVAAAAE   69 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCc-c-----cEEEEecCh--hhhhh----cCCceEEEEecCCCHHHHHHHHH
Confidence            444567999999999999999999998763 1     588888864  22221    00000000000000011122   


Q ss_pred             hcCCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHHHHhCCCC
Q 020022           78 ACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      .+...|+||+++|.....    ..+.   .+.+..|......+.+.+....  .+...++++|.....         .+.
T Consensus        70 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~---------~~~  140 (238)
T PRK08264         70 AASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW---------VNF  140 (238)
T ss_pred             hcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc---------cCC
Confidence            233589999999973211    1222   2334566655555555443221  123456667653321         122


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHc
Q 020022          149 PAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                      +....++.+..-...+...+++.+
T Consensus       141 ~~~~~y~~sK~a~~~~~~~l~~~~  164 (238)
T PRK08264        141 PNLGTYSASKAAAWSLTQALRAEL  164 (238)
T ss_pred             CCchHhHHHHHHHHHHHHHHHHHh
Confidence            222234445554455556666655

>PRK06128 oxidoreductase; Provisional

Probab=97.65  E-value=0.00093  Score=61.75  Aligned_cols=153  Identities=15%  Similarity=0.103  Sum_probs=82.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCCh------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDA------   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~------   75 (332)
                      .++|.|+||+|.+|.+++..|+..|.       ++.+.+++.+...++.....+.......   ..++....+.      
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G~-------~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  127 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREGA-------DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVER  127 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcCC-------EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHH
Confidence            36899999999999999999998764       6777766432222222222222211000   0011100111      


Q ss_pred             -hhhcCCCcEEEEeCCCCCCC----CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           76 -VEACTGVNIAVMVGGFPRKE----GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        76 -~~al~~aDiVi~~ag~~~~~----~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                       .+.+...|++|+.||.....    ..+   ....+..|+...-.+++.+..+..+...+|++|.-...         .+
T Consensus       128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~---------~~  198 (300)
T PRK06128        128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSY---------QP  198 (300)
T ss_pred             HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcccc---------CC
Confidence             12234689999999974211    122   34456778876767777766553344567666643221         11


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .+..-.++.++.-...+-+.+++.+.
T Consensus       199 ~~~~~~Y~asK~a~~~~~~~la~el~  224 (300)
T PRK06128        199 SPTLLDYASTKAAIVAFTKALAKQVA  224 (300)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhh
Confidence            11111245555555566666777653

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.00076  Score=60.46  Aligned_cols=159  Identities=14%  Similarity=0.130  Sum_probs=87.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVE   77 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~   77 (332)
                      |+.+.+++.|+||+|.+|.+++..|+..|.       ++.+.++++  +.++....++.+.....   ..++....+..+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGA-------KVVVGARRQ--AELDQLVAEIRAEGGEAVALAGDVRDEAYAKA   72 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            333457899999999999999999998764       789999874  34433333333211000   001100001111


Q ss_pred             -------hcCCCcEEEEeCCCCC--CC--CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           78 -------ACTGVNIAVMVGGFPR--KE--GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        78 -------al~~aDiVi~~ag~~~--~~--~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                             .+...|++|+.||...  .+  ..+.   ...+..|+.    ..+.+.+.+.+..  ...++++|.....   
T Consensus        73 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~--~~~iv~~sS~~~~---  147 (254)
T PRK07478         73 LVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG--GGSLIFTSTFVGH---  147 (254)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CceEEEEechHhh---
Confidence                   1236899999999742  12  2222   344566764    5555566665543  3456666643211   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .  .+.+....++.++.-...+-..+++.++  +..|+
T Consensus       148 ---~--~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  181 (254)
T PRK07478        148 ---T--AGFPGMAAYAASKAGLIGLTQVLAAEYG--AQGIR  181 (254)
T ss_pred             ---c--cCCCCcchhHHHHHHHHHHHHHHHHHHh--hcCEE
Confidence               0  1223223456666666677777777765  34555

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=97.65  E-value=0.0003  Score=65.04  Aligned_cols=165  Identities=14%  Similarity=0.130  Sum_probs=88.1

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh----cCCCc
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA----CTGVN   83 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a----l~~aD   83 (332)
                      |.|+||+|++|++++..|+..+. .     ++.++|.......+.    .+...  .....+.........    +.++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~-~-----~v~~~~~~~~~~~~~----~~~~~--~~~~d~~~~~~~~~~~~~~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGI-T-----DILVVDNLRDGHKFL----NLADL--VIADYIDKEDFLDRLEKGAFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCC-c-----eEEEEecCCCchhhh----hhhhe--eeeccCcchhHHHHHHhhccCCCC
Confidence            67999999999999999998763 1     577777653211111    11100  000011111112221    25899


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH---HHHHhCCCCCCCcEEEechHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL---ILKEFAPSIPAKNITCLTRLD  160 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~---~~~~~~~~~~~~~i~~~t~ld  160 (332)
                      +||++|+.......+....+..|+.....+.+.+.+..   ..+|++|.. .+...   ...+..+-..+...++.+...
T Consensus        69 ~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~v~~SS~-~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~  144 (314)
T TIGR02197        69 AIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG---IPFIYASSA-ATYGDGEAGFREGRELERPLNVYGYSKFL  144 (314)
T ss_pred             EEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC---CcEEEEccH-HhcCCCCCCcccccCcCCCCCHHHHHHHH
Confidence            99999986543333455677889999999999988764   246666642 11000   000000000122234555555


Q ss_pred             HHHHHHH-HHH-HcCCCCCCeeeeEEEecc
Q 020022          161 HNRALGQ-ISE-KLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       161 s~r~~~~-la~-~l~v~~~~v~~~~v~G~h  188 (332)
                      ...+... .++ ..+++...++...|+|..
T Consensus       145 ~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~  174 (314)
T TIGR02197       145 FDQYVRRRVLPEALSAQVVGLRYFNVYGPR  174 (314)
T ss_pred             HHHHHHHHhHhhccCCceEEEEEeeccCCC
Confidence            4444322 222 335566667777778864

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.00084  Score=59.89  Aligned_cols=150  Identities=16%  Similarity=0.093  Sum_probs=78.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAV   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~   76 (332)
                      |..+.+++.|+||+|.+|++++..|+..|.       ++.+++++.  +.+.....++. .. ....-+... +   ...
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~   69 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGA-------RVVVADRDA--EAAERVAAAIA-AG-GRAFARQGDVGSAEAVE   69 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCC-------eEEEecCCH--HHHHHHHHHHh-cC-CeEEEEEcCCCCHHHHH
Confidence            655667999999999999999999998763       688998774  22322222221 00 000001111 1   111


Q ss_pred             hh-------cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           77 EA-------CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        77 ~a-------l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                      ++       +.+.|+||+.+|.....   ..+.+   ..+..|....    +.+.+.+++..  ...++++|.-...   
T Consensus        70 ~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~~sS~~~~---  144 (252)
T PRK06138         70 ALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG--GGSIVNTASQLAL---  144 (252)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC--CeEEEEECChhhc---
Confidence            22       24789999999975321   12222   2355666544    34444444443  2456666642221   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHc
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                            .+.+....++.+..-...+...+++.+
T Consensus       145 ------~~~~~~~~Y~~sK~a~~~~~~~l~~~~  171 (252)
T PRK06138        145 ------AGGRGRAAYVASKGAIASLTRAMALDH  171 (252)
T ss_pred             ------cCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence                  112222234444444455666666655

>PRK07069 short chain dehydrogenase; Validated

Probab=97.64  E-value=0.00075  Score=60.15  Aligned_cols=155  Identities=23%  Similarity=0.234  Sum_probs=85.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEee-CC---h------
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVAT-TD---A------   75 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~-~~---~------   75 (332)
                      ||.|+||+|++|.+++..|+..|.       ++++.+++. .+.++....++...... ....+... ++   .      
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA-------KVFLTDIND-AAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQ   72 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCc-chHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHH
Confidence            489999999999999999998763       789998862 23333333333221100 00001110 11   1      


Q ss_pred             -hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           76 -VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        76 -~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                       .+.+...|+||+.+|.....   ..+.   ...+..|+.    ..+.+.+.+++.. . ..++++|.....        
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-~~ii~~ss~~~~--------  142 (251)
T PRK07069         73 AADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-P-ASIVNISSVAAF--------  142 (251)
T ss_pred             HHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-C-cEEEEecChhhc--------
Confidence             12235689999999875421   1122   234566766    7778888887654 3 456666643321        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.+..-.++.+......+.+.+++.+.-....++
T Consensus       143 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~  177 (251)
T PRK07069        143 -KAEPDYTAYNASKAAVASLTKSIALDCARRGLDVR  177 (251)
T ss_pred             -cCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEE
Confidence             11121113455555445666667776654333454

>PRK12320 hypothetical protein; Provisional

Probab=97.63  E-value=0.00021  Score=73.15  Aligned_cols=101  Identities=13%  Similarity=0.151  Sum_probs=64.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||.|+||+||+|++++..|+..|.       +|..+|..+.  .......++..      .++... ...+++.++|+|
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~-------~Vi~ldr~~~--~~~~~~ve~v~------~Dl~d~-~l~~al~~~D~V   64 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGH-------TVSGIAQHPH--DALDPRVDYVC------ASLRNP-VLQELAGEADAV   64 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEeCChh--hcccCCceEEE------ccCCCH-HHHHHhcCCCEE
Confidence            4899999999999999999988763       7888987531  11000000000      011111 234567899999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      |++++...  ..    -...|+....++++.+++..   +++|++|
T Consensus        65 IHLAa~~~--~~----~~~vNv~Gt~nLleAA~~~G---vRiV~~S  101 (699)
T PRK12320         65 IHLAPVDT--SA----PGGVGITGLAHVANAAARAG---ARLLFVS  101 (699)
T ss_pred             EEcCccCc--cc----hhhHHHHHHHHHHHHHHHcC---CeEEEEE
Confidence            99997531  11    12468888889998887764   3555555

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.63  E-value=0.00048  Score=66.44  Aligned_cols=104  Identities=16%  Similarity=0.154  Sum_probs=61.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe--e--CChhhh
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA--T--TDAVEA   78 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~--~--~~~~~a   78 (332)
                      .+.++|.|+||+|.+|++++..|+..|.       ++.++++++  +.+...   +.+.... ...+..  +  .+..+.
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~-------~Vi~l~r~~--~~l~~~---~~~~~~~-v~~v~~Dvsd~~~v~~~  242 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGA-------KVVALTSNS--DKITLE---INGEDLP-VKTLHWQVGQEAALAEL  242 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHH---HhhcCCC-eEEEEeeCCCHHHHHHH
Confidence            3457899999999999999999998763       688888764  222211   1111000 001111  1  123345


Q ss_pred             cCCCcEEEEeCCCCCCCCCCH---HHHHHhhHHH----HHHHHHHHHh
Q 020022           79 CTGVNIAVMVGGFPRKEGMER---KDVMSKNVSI----YKAQASALEQ  119 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r---~~~~~~n~~i----~~~i~~~i~~  119 (332)
                      +.+.|++|+.||.......+.   .+.+..|...    ++.+.+.+++
T Consensus       243 l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~  290 (406)
T PRK07424        243 LEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKT  290 (406)
T ss_pred             hCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            678999999998754333333   3445666654    4444555544

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.63  E-value=0.00045  Score=65.71  Aligned_cols=78  Identities=18%  Similarity=0.238  Sum_probs=49.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~aD   83 (332)
                      ++||.||| +|+||+.++..|++.+. +     +|++.|++.  +++... .+..+... ...-.+.....+.+.+++.|
T Consensus         1 m~~ilviG-aG~Vg~~va~~la~~~d-~-----~V~iAdRs~--~~~~~i-~~~~~~~v~~~~vD~~d~~al~~li~~~d   70 (389)
T COG1748           1 MMKILVIG-AGGVGSVVAHKLAQNGD-G-----EVTIADRSK--EKCARI-AELIGGKVEALQVDAADVDALVALIKDFD   70 (389)
T ss_pred             CCcEEEEC-CchhHHHHHHHHHhCCC-c-----eEEEEeCCH--HHHHHH-HhhccccceeEEecccChHHHHHHHhcCC
Confidence            46899999 59999999999998764 2     899999983  333322 11111100 00011111234678899999


Q ss_pred             EEEEeCCCC
Q 020022           84 IAVMVGGFP   92 (332)
Q Consensus        84 iVi~~ag~~   92 (332)
                      +||.++...
T Consensus        71 ~VIn~~p~~   79 (389)
T COG1748          71 LVINAAPPF   79 (389)
T ss_pred             EEEEeCCch
Confidence            999997543

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.63  E-value=0.00039  Score=62.95  Aligned_cols=151  Identities=13%  Similarity=0.120  Sum_probs=78.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA---   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a---   78 (332)
                      .++|.|+||+|.+|++++..|+..|.       +|.++|++.  +.+.....++.......   ..++....+..++   
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~   79 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGA-------NVAVASRSQ--EKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQ   79 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHH
Confidence            46999999999999999999998763       789999874  33332222332211000   0011111111222   


Q ss_pred             ----cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCcccchHHHHHHhCCC
Q 020022           79 ----CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        79 ----l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                          +...|++|+.+|.....   ..+.+   ..+..|......+.+.+...- .+++.++++|.+....         +
T Consensus        80 ~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~---------~  150 (264)
T PRK07576         80 IADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV---------P  150 (264)
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc---------C
Confidence                24579999998754211   12222   334566655455544443321 1234677777643310         1


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .+....++.++.-..++-+.++..+.
T Consensus       151 ~~~~~~Y~asK~a~~~l~~~la~e~~  176 (264)
T PRK07576        151 MPMQAHVCAAKAGVDMLTRTLALEWG  176 (264)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhh
Confidence            12122344445444566666666654

>PRK08643 acetoin reductase; Validated

Probab=97.61  E-value=0.0019  Score=57.85  Aligned_cols=154  Identities=17%  Similarity=0.206  Sum_probs=81.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCC-------h
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTD-------A   75 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~-------~   75 (332)
                      +++.|+||+|++|.+++..|+..|.       +++++|++.  +.+.....++.+....   ...++.....       .
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   73 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGF-------KVAIVDYNE--ETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQV   73 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            4789999999999999999998764       789999874  3333333333321100   0001110001       1


Q ss_pred             hhhcCCCcEEEEeCCCCCC-C--CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           76 VEACTGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~-~--~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                      .+.+.+.|+||+++|.... +  ..+.   ...+..|+..    .+.+.+.+.+.. +++.++++|.....         
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~---------  143 (256)
T PRK08643         74 VDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLG-HGGKIINATSQAGV---------  143 (256)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCCEEEEECccccc---------
Confidence            1223468999999987432 1  1122   2344556643    334444444433 23567777653321         


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .+.|....++.++.-...+.+.+++.+  .+..|+
T Consensus       144 ~~~~~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~  176 (256)
T PRK08643        144 VGNPELAVYSSTKFAVRGLTQTAARDL--ASEGIT  176 (256)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHh--cccCcE
Confidence            112222235555555455666666655  345555

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.001  Score=60.68  Aligned_cols=122  Identities=18%  Similarity=0.147  Sum_probs=66.9

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChh
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV   76 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~   76 (332)
                      |.. +.+.+.|+||+|.+|++++..|+..|.       ++.+.|+++  +.++....++......   ...++....+..
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~-------~Vv~~~r~~--~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~   71 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGA-------RVVLGDVDK--PGLRQAVNHLRAEGFDVHGVMCDVRHREEVT   71 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            543 346799999999999999999998774       789999874  3343333333221100   000111111111


Q ss_pred             h-------hcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecC
Q 020022           77 E-------ACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        77 ~-------al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +       .+...|++|+.||.....   ..+.+   ..+..|+...    +.+.+.+.+... .+.++++|.
T Consensus        72 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~-~g~iv~isS  143 (275)
T PRK05876         72 HLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT-GGHVVFTAS  143 (275)
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-CCEEEEeCC
Confidence            1       223579999999974311   12322   3355665444    444444444432 345666664

>PRK07680 late competence protein ComER; Validated

Probab=97.60  E-value=0.00069  Score=61.90  Aligned_cols=100  Identities=12%  Similarity=0.212  Sum_probs=62.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.+|++++..|...+.+.   +.++.++|+++  +.++.    +.+. .   ..+....+..++++++|+|
T Consensus         1 m~I~iIG-~G~mG~ala~~L~~~g~~~---~~~v~v~~r~~--~~~~~----~~~~-~---~g~~~~~~~~~~~~~aDiV   66 (273)
T PRK07680          1 MNIGFIG-TGNMGTILIEAFLESGAVK---PSQLTITNRTP--AKAYH----IKER-Y---PGIHVAKTIEEVISQSDLI   66 (273)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCH--HHHHH----HHHH-c---CCeEEECCHHHHHHhCCEE
Confidence            4799999 6999999999998876322   11689999874  33321    2211 0   1234455667778999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      |++.-    +            ..++++.+.+..+-.++..|+.+++++.
T Consensus        67 ilav~----p------------~~~~~vl~~l~~~l~~~~~iis~~ag~~  100 (273)
T PRK07680         67 FICVK----P------------LDIYPLLQKLAPHLTDEHCLVSITSPIS  100 (273)
T ss_pred             EEecC----H------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence            99851    1            1123444444444334566777888764

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.0013  Score=59.36  Aligned_cols=121  Identities=25%  Similarity=0.287  Sum_probs=67.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CChh---
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDAV---   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~~---   76 (332)
                      |.++.++|.|+||+|.+|..++..|+..|.       +|.++++++  +.++....++....  ...-+... ++..   
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~--~~~~~~~D~~d~~~~~   69 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGA-------RLLLVGRNA--EKLEALAARLPYPG--RHRWVVADLTSEAGRE   69 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHhcCC--ceEEEEccCCCHHHHH
Confidence            666778999999999999999999998763       789999874  33332222221100  00000000 1111   


Q ss_pred             ------hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecC
Q 020022           77 ------EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVAN  132 (332)
Q Consensus        77 ------~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tN  132 (332)
                            +.+...|+||+++|.....   ..+.   .+.+..|+.....+.+.+..+.  .+...+++++.
T Consensus        70 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS  139 (263)
T PRK09072         70 AVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS  139 (263)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence                  1135689999999975321   1122   2345667665555555543321  11245666655

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.59  E-value=0.00026  Score=68.13  Aligned_cols=114  Identities=19%  Similarity=0.166  Sum_probs=66.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhh--HHHHhhhhcCCcc----ceEeeCChhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV--KMELVDAAFPLLK----GVVATTDAVE   77 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~--~~dl~~~~~~~~~----~~~~~~~~~~   77 (332)
                      +.+||.|+||+|++|++++..|+..|.       +|++++++..  .....  ..++... .+...    ++.-.....+
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~-------~V~~l~R~~~--~~~~~~~~~~~~~~-~~~v~~v~~Dl~d~~~l~~  128 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGY-------NVVAVAREKS--GIRGKNGKEDTKKE-LPGAEVVFGDVTDADSLRK  128 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEEechh--hccccchhhHHhhh-cCCceEEEeeCCCHHHHHH
Confidence            347999999999999999999998763       7888887642  11110  0111100 00000    1111112344


Q ss_pred             hcC----CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           78 ACT----GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        78 al~----~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +++    ++|+||++++.+....   .+....|....+++.+.+++...  .+++++|+
T Consensus       129 ~~~~~~~~~D~Vi~~aa~~~~~~---~~~~~vn~~~~~~ll~aa~~~gv--~r~V~iSS  182 (390)
T PLN02657        129 VLFSEGDPVDVVVSCLASRTGGV---KDSWKIDYQATKNSLDAGREVGA--KHFVLLSA  182 (390)
T ss_pred             HHHHhCCCCcEEEECCccCCCCC---ccchhhHHHHHHHHHHHHHHcCC--CEEEEEee
Confidence            555    5899999877432111   12345677778888888887653  24666654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.59  E-value=0.00043  Score=61.63  Aligned_cols=121  Identities=19%  Similarity=0.115  Sum_probs=65.7

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV   76 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~   76 (332)
                      |++ +.++|.|+||+|++|.+++..|+..|.       +|.+++++.  +.+.....++.......   ..++....+..
T Consensus         1 ~~~~~~~~ilItGasg~iG~~l~~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~   71 (251)
T PRK12826          1 TRDLEGRVALVTGAARGIGRAIAVRLAADGA-------EVIVVDICG--DDAAATAELVEAAGGKARARQVDVRDRAALK   71 (251)
T ss_pred             CCCCCCCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            444 357899999999999999999998763       788998874  23322222232111000   00110011111


Q ss_pred             hh-------cCCCcEEEEeCCCCCC-C--CCCH---HHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecC
Q 020022           77 EA-------CTGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVAN  132 (332)
Q Consensus        77 ~a-------l~~aDiVi~~ag~~~~-~--~~~r---~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tN  132 (332)
                      +.       +..+|+||+++|.... +  ..+.   .+.+..|+.....+.+.+    .+.. + .+++++|.
T Consensus        72 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~-~~ii~~ss  142 (251)
T PRK12826         72 AAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-G-GRIVLTSS  142 (251)
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C-cEEEEEec
Confidence            22       2368999999987532 1  2222   234556665555554444    4433 2 45666654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.58  E-value=0.001  Score=59.00  Aligned_cols=39  Identities=31%  Similarity=0.384  Sum_probs=31.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPP   46 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~   46 (332)
                      |..++++|.|+||+|++|+.++..|+..|.       ++++. ++++
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~-------~v~~~~~r~~   40 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGA-------KVVIAYDINE   40 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCCCH
Confidence            555667999999999999999999988763       56666 8764

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.58  E-value=0.00063  Score=60.87  Aligned_cols=118  Identities=20%  Similarity=0.205  Sum_probs=66.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhh---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE---   77 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~---   77 (332)
                      ..++|.|+||+|++|++++..|+..|.       ++.++++++  +.+.....++......   ...++....+..+   
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   73 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-------KVVIADLND--EAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGID   73 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            346899999999999999999998763       789999874  3333333333211100   0001111111112   


Q ss_pred             ----hcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022           78 ----ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                          .+.+.|+||+++|......   .+   .++.+..|+..    ++.+.+.+++.. . .+++++|.
T Consensus        74 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~-~~iv~iss  140 (258)
T PRK12429         74 YAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-G-GRIINMAS  140 (258)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-C-eEEEEEcc
Confidence                2346899999998643211   12   12334455554    666666666554 2 45666664

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.58  E-value=0.00048  Score=62.16  Aligned_cols=149  Identities=17%  Similarity=0.166  Sum_probs=78.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~-------   76 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|.++|+++  +.++....++.........++....+..       
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-------RVAVLERSA--EKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTV   75 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHH
Confidence            457999999999999999999998764       789999874  3333222221100000000110000111       


Q ss_pred             hhcCCCcEEEEeCCCCCC--C--CCCHH-------HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           77 EACTGVNIAVMVGGFPRK--E--GMERK-------DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~--~--~~~r~-------~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                      +.+...|++|+.+|....  +  ..+.+       ..+..|+..    ++.+.+.+++.   .+.+|+++.-...     
T Consensus        76 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~-----  147 (263)
T PRK06200         76 DAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS---GGSMIFTLSNSSF-----  147 (263)
T ss_pred             HhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc---CCEEEEECChhhc-----
Confidence            223468999999997431  1  22222       233445443    44444444332   2455555532210     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                        .  ..+....++.++.-...+-+.+++.++
T Consensus       148 --~--~~~~~~~Y~~sK~a~~~~~~~la~el~  175 (263)
T PRK06200        148 --Y--PGGGGPLYTASKHAVVGLVRQLAYELA  175 (263)
T ss_pred             --C--CCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence              0  112122456666666677777888775

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.58  E-value=0.00097  Score=61.16  Aligned_cols=72  Identities=21%  Similarity=0.218  Sum_probs=47.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..|||+||| +|.+|++++..|+..+...   +.++..+|++. +++++    ++...   .  .+....+..+++++||
T Consensus         2 ~~mkI~~IG-~G~mG~aia~~l~~~g~~~---~~~v~v~~r~~-~~~~~----~l~~~---~--g~~~~~~~~e~~~~aD   67 (279)
T PRK07679          2 SIQNISFLG-AGSIAEAIIGGLLHANVVK---GEQITVSNRSN-ETRLQ----ELHQK---Y--GVKGTHNKKELLTDAN   67 (279)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCC-HHHHH----HHHHh---c--CceEeCCHHHHHhcCC
Confidence            346999999 7999999999999876321   12688898753 12222    22211   0  1234456667789999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +||++.
T Consensus        68 vVilav   73 (279)
T PRK07679         68 ILFLAM   73 (279)
T ss_pred             EEEEEe
Confidence            999984

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.002  Score=57.24  Aligned_cols=119  Identities=20%  Similarity=0.156  Sum_probs=65.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh-----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV-----   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~-----   76 (332)
                      .++|.|+||+|.+|++++..|+..|.       ++.++++++  +.+.....++.......   ..++.-.....     
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   77 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGA-------TVAFNDGLA--AEARELAAALEAAGGRAHAIAADLADPASVQRFFDA   77 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            57999999999999999999998763       788888764  33333333332211000   00110000111     


Q ss_pred             --hhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecC
Q 020022           77 --EACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHA--APNCKVLVVAN  132 (332)
Q Consensus        77 --~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tN  132 (332)
                        +.+.+.|+||+++|.....   ..+..   ..+..|..-...+.+.+.++.  .+..+++++|.
T Consensus        78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  143 (250)
T PRK12939         78 AAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS  143 (250)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence              1125789999999875421   12222   234556655555554443321  12356777664

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.0017  Score=58.67  Aligned_cols=150  Identities=15%  Similarity=0.069  Sum_probs=81.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      +.+++.|+||+|++|.+++..|+..|.       ++++.++++  +.++....++.... ....-+... ++   ..++ 
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~   78 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-------DVLIAARTE--SQLDEVAEQIRAAG-RRAHVVAADLAHPEATAGLA   78 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHH
Confidence            347899999999999999999998764       789999874  33333333332211 000001111 11   1111 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecCcccchHHHHH
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                            +...|+||+.||.....   ..+   ..+.+..|......+.+...    +.. +...++++|.-...      
T Consensus        79 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~~sS~~~~------  151 (263)
T PRK07814         79 GQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHS-GGGSVINISSTMGR------  151 (263)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhc-CCeEEEEEcccccc------
Confidence                  24689999999864321   112   22345566655555544443    333 23567777653221      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                         .+.+....++.+......+.+.++..+.
T Consensus       152 ---~~~~~~~~Y~~sK~a~~~~~~~~~~e~~  179 (263)
T PRK07814        152 ---LAGRGFAAYGTAKAALAHYTRLAALDLC  179 (263)
T ss_pred             ---CCCCCCchhHHHHHHHHHHHHHHHHHHC
Confidence               1122222455555555566677777664

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.56  E-value=0.0013  Score=58.42  Aligned_cols=115  Identities=19%  Similarity=0.229  Sum_probs=64.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eC------Chhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TT------DAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~------~~~~   77 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|.++++++  +.+.....++...    ..++.. ..      +..+
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~   73 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGV-------NVGLLARTE--ENLKAVAEEVEAY----GVKVVIATADVSDYEEVTA   73 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHh----CCeEEEEECCCCCHHHHHH
Confidence            46899999999999999999998764       789999874  2332222233211    011111 11      1122


Q ss_pred             h-------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcc
Q 020022           78 A-------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPA  134 (332)
Q Consensus        78 a-------l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~  134 (332)
                      +       +.+.|+||+++|.....   +.+.   ...+..|+.-...+.+.+    .+..  ...++++|...
T Consensus        74 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~~ss~~  145 (239)
T PRK07666         74 AIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ--SGDIINISSTA  145 (239)
T ss_pred             HHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CcEEEEEcchh
Confidence            2       24789999999875321   1222   233556665443444433    3332  24566666543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.56  E-value=0.001  Score=58.91  Aligned_cols=124  Identities=19%  Similarity=0.183  Sum_probs=66.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh-
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV-   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~-   76 (332)
                      |.+..++|.|+||+|++|++++..|+..|.       ++.+...+.. ...+....++.......   ..++.-..... 
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGA-------NVVINYASSE-AGAEALVAEIGALGGKALAVQGDVSDAESVER   72 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCch-hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            556678999999999999999999998763       5656555431 22222222222110000   00000000111 


Q ss_pred             ------hhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhhcC--CCeEEEEecC
Q 020022           77 ------EACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHAA--PNCKVLVVAN  132 (332)
Q Consensus        77 ------~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~i~~~i~~~~~--~~~~viv~tN  132 (332)
                            +.+.+.|+||+++|.....   ..+.+   ..+..|+.....+.+.+..+..  +..+++++|.
T Consensus        73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss  142 (248)
T PRK05557         73 AVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS  142 (248)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence                  1124689999999875321   12222   3345666666666666654421  2245666664

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.55  E-value=0.0011  Score=59.01  Aligned_cols=157  Identities=15%  Similarity=0.112  Sum_probs=81.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCCh--
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA--   75 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~--   75 (332)
                      |+.+.++|.|+||+|.+|.+++..|+..|.       ++.++++++. +.+   ...+......   ...++....+.  
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~vi~~~r~~~-~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGA-------DIVGAGRSEP-SET---QQQVEALGRRFLSLTADLSDIEAIKA   69 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCchH-HHH---HHHHHhcCCceEEEECCCCCHHHHHH
Confidence            445667999999999999999999998764       7888987631 111   1112111100   00011100111  


Q ss_pred             -----hhhcCCCcEEEEeCCCCCCC---CC---CHHHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecCcccchHHH
Q 020022           76 -----VEACTGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        76 -----~~al~~aDiVi~~ag~~~~~---~~---~r~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tNP~~~~~~~  140 (332)
                           .+.....|++|+.+|.....   ..   ...+.+..|+.....+.+.+.    +.. +...+++++.-..     
T Consensus        70 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~-----  143 (248)
T TIGR01832        70 LVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQG-RGGKIINIASMLS-----  143 (248)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCeEEEEEecHHh-----
Confidence                 12234689999999875321   11   223445667654444444443    322 1356666664211     


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         + .+.+....++.+..-...+.+.+++.+.  +..|+
T Consensus       144 ---~-~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~  177 (248)
T TIGR01832       144 ---F-QGGIRVPSYTASKHGVAGLTKLLANEWA--AKGIN  177 (248)
T ss_pred             ---c-cCCCCCchhHHHHHHHHHHHHHHHHHhC--ccCcE
Confidence               0 1111112344444444566666777764  34454

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.55  E-value=0.00042  Score=61.37  Aligned_cols=39  Identities=15%  Similarity=0.204  Sum_probs=33.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |+.+.++|.|+||+|++|+.++..|+..|.       +|.++++++
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~-------~V~~~~r~~   39 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGA-------QVCINSRNE   39 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            655567999999999999999999998764       789999874

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.55  E-value=0.0021  Score=56.73  Aligned_cols=150  Identities=13%  Similarity=0.084  Sum_probs=81.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhh---hhhhHHHHhhhhcCCccceEeeCChhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA---LNGVKMELVDAAFPLLKGVVATTDAVE   77 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~---l~~~~~dl~~~~~~~~~~~~~~~~~~~   77 (332)
                      |..+.+++.|+||+|.+|.+++..|++.|.       ++.+.++++....   +.....|+.+.          .....+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~-------~v~~~~r~~~~~~~~~~~~~~~D~~~~----------~~~~~~   63 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGA-------QVYGVDKQDKPDLSGNFHFLQLDLSDD----------LEPLFD   63 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCC-------EEEEEeCCcccccCCcEEEEECChHHH----------HHHHHH
Confidence            555667899999999999999999998763       6888888642110   00001121111          011223


Q ss_pred             hcCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           78 ACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                      .+...|+||+.+|....  +  ..+.   ...+..|+.....+.+.+    .+..  ...+++++.....         .
T Consensus        64 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~~sS~~~~---------~  132 (235)
T PRK06550         64 WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK--SGIIINMCSIASF---------V  132 (235)
T ss_pred             hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEEcChhhc---------c
Confidence            35678999999986421  1  1222   234566665444444443    3332  2456666542221         1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.+....++.+..-...+.+.+++.++  +..|+
T Consensus       133 ~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~gi~  164 (235)
T PRK06550        133 AGGGGAAYTASKHALAGFTKQLALDYA--KDGIQ  164 (235)
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence            112112345555444455666776664  34565

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.54  E-value=0.00027  Score=56.41  Aligned_cols=74  Identities=16%  Similarity=0.235  Sum_probs=43.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEE
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV   86 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi   86 (332)
                      ||+|+||+|.+|+.++..|....-+.     .+.+++...    -.|...............+.+.....+.+.++|+||
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e-----~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf   71 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFE-----LVALVSSSR----SAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVF   71 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEE-----EEEEEESTT----TTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCcc-----EEEeeeecc----ccCCeeehhccccccccceeEeecchhHhhcCCEEE
Confidence            79999999999999999998854321     355666542    112211111111111223334334556789999999


Q ss_pred             EeC
Q 020022           87 MVG   89 (332)
Q Consensus        87 ~~a   89 (332)
                      ++.
T Consensus        72 ~a~   74 (121)
T PF01118_consen   72 LAL   74 (121)
T ss_dssp             E-S
T ss_pred             ecC
Confidence            984

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00064  Score=61.16  Aligned_cols=149  Identities=19%  Similarity=0.209  Sum_probs=78.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-CCccceEeeCChhhh----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEA----   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~~~~~~~~~~~~~~a----   78 (332)
                      +++|.|+||+|.+|..++..|+..|.       ++.++|++.  +.++....++.... . ....+++......++    
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~   72 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-------TLGLVARRT--DALQAFAARLPKAARVSVYAADVRDADALAAAAADF   72 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHH
Confidence            35899999999999999999998763       789999874  33432222221110 0 000011000111122    


Q ss_pred             ---cCCCcEEEEeCCCCCCCC----CC---HHHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           79 ---CTGVNIAVMVGGFPRKEG----ME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        79 ---l~~aDiVi~~ag~~~~~~----~~---r~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                         ....|++|+.+|......    .+   ....+..|+.-.    +.+.+.+.+.. . ..+++++.-...        
T Consensus        73 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~-~~iv~isS~~~~--------  142 (257)
T PRK07024         73 IAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-R-GTLVGIASVAGV--------  142 (257)
T ss_pred             HHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-C-CEEEEEechhhc--------
Confidence               223699999998753211    22   223445555443    34445665554 3 456666542221        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                       .+.|..-.++.++.....+...++..+.
T Consensus       143 -~~~~~~~~Y~asK~a~~~~~~~l~~e~~  170 (257)
T PRK07024        143 -RGLPGAGAYSASKAAAIKYLESLRVELR  170 (257)
T ss_pred             -CCCCCCcchHHHHHHHHHHHHHHHHHhh
Confidence             1223223455566655566666665553

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.54  E-value=0.00078  Score=60.41  Aligned_cols=120  Identities=17%  Similarity=0.199  Sum_probs=65.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChh----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV----   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~----   76 (332)
                      ..+++.|+||+|.+|.+++..|+..|.       ++.+.|+++  +.+.....++.+....   ...++....+..    
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-------~vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-------EIIINDITA--ERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIE   78 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHH
Confidence            457899999999999999999998763       789999874  3343333333321100   000110000111    


Q ss_pred             ---hhcCCCcEEEEeCCCCCC-C--CCC---HHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecC
Q 020022           77 ---EACTGVNIAVMVGGFPRK-E--GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVAN  132 (332)
Q Consensus        77 ---~al~~aDiVi~~ag~~~~-~--~~~---r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tN  132 (332)
                         +.+...|+||+++|.... +  ..+   ....+..|......+.+.+.++.  .+.+.++++|.
T Consensus        79 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  145 (254)
T PRK08085         79 HIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICS  145 (254)
T ss_pred             HHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence               122457999999987421 1  122   22345666554444444443321  12356666664

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=97.54  E-value=9.4e-05  Score=68.14  Aligned_cols=155  Identities=15%  Similarity=0.183  Sum_probs=80.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||.|+||+|++|+++...|...+.       ++..+++..         .|+.+....        ....+.. .-|+|
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~-------~v~~~~r~~---------~dl~d~~~~--------~~~~~~~-~pd~V   55 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGY-------EVIATSRSD---------LDLTDPEAV--------AKLLEAF-KPDVV   55 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSE-------EEEEESTTC---------S-TTSHHHH--------HHHHHHH---SEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCC-------EEEEeCchh---------cCCCCHHHH--------HHHHHHh-CCCeE
Confidence            6999999999999999999987653       677775542         233222100        0111222 47899


Q ss_pred             EEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH----HHHhCCCCCCCcEEEechH
Q 020022           86 VMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LKEFAPSIPAKNITCLTRL  159 (332)
Q Consensus        86 i~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~----~~~~~~~~~~~~i~~~t~l  159 (332)
                      |++|+....  ...+.+.....|+...+.+++...+..   +++|.+|.- .+..--    ..+. .-..|...+|-+.+
T Consensus        56 in~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~---~~li~~STd-~VFdG~~~~~y~E~-d~~~P~~~YG~~K~  130 (286)
T PF04321_consen   56 INCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG---ARLIHISTD-YVFDGDKGGPYTED-DPPNPLNVYGRSKL  130 (286)
T ss_dssp             EE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT----EEEEEEEG-GGS-SSTSSSB-TT-S----SSHHHHHHH
T ss_pred             eccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC---CcEEEeecc-EEEcCCcccccccC-CCCCCCCHHHHHHH
Confidence            999987631  123455667889999999999988764   566666631 110000    0000 00122345676777


Q ss_pred             HHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceee
Q 020022          160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP  194 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~  194 (332)
                      ...++...   ... +..=+|...++|.++.+.+-
T Consensus       131 ~~E~~v~~---~~~-~~~IlR~~~~~g~~~~~~~~  161 (286)
T PF04321_consen  131 EGEQAVRA---ACP-NALILRTSWVYGPSGRNFLR  161 (286)
T ss_dssp             HHHHHHHH---H-S-SEEEEEE-SEESSSSSSHHH
T ss_pred             HHHHHHHH---hcC-CEEEEecceecccCCCchhh
Confidence            66554333   111 22333544567886665443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.53  E-value=0.00091  Score=62.45  Aligned_cols=103  Identities=11%  Similarity=0.148  Sum_probs=66.9

Q ss_pred             hHHHHHHHHHhcccCCCCCceEEEEEeCCCch-h----h---hhhhHHH-Hhhhh----c------CCccceEeeCC--h
Q 020022           17 IGYALVPMIARGVMLGTDQPVILHMLDIPPAA-E----A---LNGVKME-LVDAA----F------PLLKGVVATTD--A   75 (332)
Q Consensus        17 vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~----~---l~~~~~d-l~~~~----~------~~~~~~~~~~~--~   75 (332)
                      ||+.+|..++..|.       +|+|+|+++.. +    .   ....... +....    .      ....+++.+++  .
T Consensus         1 MG~giA~~~a~~G~-------~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~   73 (314)
T PRK08269          1 MGQGIALAFAFAGH-------DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVARDGA   73 (314)
T ss_pred             CcHHHHHHHHhCCC-------eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeecCcch
Confidence            57888988888774       89999998621 0    1   1111111 11110    0      01246776654  6


Q ss_pred             hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                      ++++++||+||.+.              .++.++.+.+...+.+.++|++  |+.||...+...-+.
T Consensus        74 ~~a~~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~--ilaSntS~~~~~~la  124 (314)
T PRK08269         74 ADALADADLVFEAV--------------PEVLDAKREALRWLGRHVDADA--IIASTTSTFLVTDLQ  124 (314)
T ss_pred             HHHhccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCc--EEEEccccCCHHHHH
Confidence            68899999999984              4678889999999999998886  348887765443333

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.53  E-value=0.00035  Score=65.27  Aligned_cols=120  Identities=13%  Similarity=0.040  Sum_probs=65.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhhc-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEAC-   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~al-   79 (332)
                      ..++|.|+||+|++|.+++..|+..|.       +|++.++++  ++++....++.......   ..++.......+++ 
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   75 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-------HVIMACRNL--KKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVD   75 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHH
Confidence            557899999999999999999998763       789998874  33332223332100000   00110001111222 


Q ss_pred             ------CCCcEEEEeCCCCCC----CCCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022           80 ------TGVNIAVMVGGFPRK----EGMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        80 ------~~aDiVi~~ag~~~~----~~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                            ...|++|+.||....    ...+.   +..+..|...    ++.+.+.+.+...+.++||++|.
T Consensus        76 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS  145 (322)
T PRK07453         76 DFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGT  145 (322)
T ss_pred             HHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcc
Confidence                  248999999996421    12232   3345666644    44445555544321246766653

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.53  E-value=0.0041  Score=55.82  Aligned_cols=119  Identities=14%  Similarity=0.148  Sum_probs=65.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEee-CC---hhhh-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~-~~---~~~a-   78 (332)
                      .++|.|+||+|++|++++..|++.|.       ++.++|++.  +.++....++..... ....-+... ++   ...+ 
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   72 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-------RVAVADINS--EKAANVAQEINAEYGEGMAYGFGADATSEQSVLALS   72 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHH
Confidence            35799999999999999999998763       789999874  333322222222110 000001110 11   1111 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCc
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                            +...|+||+++|.+...   ..+.+   ..+..|+.-    .+.+.+.+.+... ...++++|..
T Consensus        73 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~~ss~  142 (259)
T PRK12384         73 RGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI-QGRIIQINSK  142 (259)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC-CcEEEEecCc
Confidence                  24679999999875422   22332   334556544    4455555554432 3467777654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.53  E-value=0.0013  Score=58.64  Aligned_cols=155  Identities=14%  Similarity=0.106  Sum_probs=76.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeC-----
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT-----   73 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~-----   73 (332)
                      ++..++|.|+||+|++|++++..|+..+.       ++++..... .+.......++......   ...+++...     
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   74 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGS-------LVVVNAKKR-AEEMNETLKMVKENGGEGIGVLADVSTREGCETL   74 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCC-hHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHH
Confidence            34567999999999999999999998763       555544321 12222221222111000   000111011     


Q ss_pred             --ChhhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           74 --DAVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        74 --~~~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                        +..+.+...|+||+++|.....   +.+.   .+.+..|......+.+.+.++-.+...++++|.-..        + 
T Consensus        75 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--------~-  145 (252)
T PRK06077         75 AKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG--------I-  145 (252)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc--------c-
Confidence              1122235689999999974321   1222   233455555444444444433222345666654211        1 


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .+.+....++.++.....+.+.+++.++
T Consensus       146 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~  173 (252)
T PRK06077        146 RPAYGLSIYGAMKAAVINLTKYLALELA  173 (252)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence            1223222344455555566666777664

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00037  Score=62.77  Aligned_cols=117  Identities=21%  Similarity=0.166  Sum_probs=64.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhh------
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEA------   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~a------   78 (332)
                      +++.|+||+|++|+.++..|+..|.       ++.++|++.  +.++....++...... ...++.-..+..++      
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   72 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-------RVGAYDINE--AGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAA   72 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4799999999999999999998764       688999874  3332222222100000 00011000111222      


Q ss_pred             --cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCc
Q 020022           79 --CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANP  133 (332)
Q Consensus        79 --l~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP  133 (332)
                        ....|+||++||......   .+   .+..+..|+.....+.+.+    ++.  +...+++++..
T Consensus        73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS~  137 (260)
T PRK08267         73 ATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT--PGARVINTSSA  137 (260)
T ss_pred             HcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCEEEEeCch
Confidence              235699999999754221   12   2345667776555554443    333  23456666643

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00095  Score=60.88  Aligned_cols=113  Identities=8%  Similarity=0.100  Sum_probs=64.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhc----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEAC----   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al----   79 (332)
                      .++|.|+||+|.+|.+++..|+..|.       +|.+.++++  +.+.    ++.+.... ...++....+...++    
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~-------~Vi~~~r~~--~~~~----~l~~~~~~~~~~Dl~d~~~~~~~~~~~~   70 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGW-------RVFATCRKE--EDVA----ALEAEGLEAFQLDYAEPESIAALVAQVL   70 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHH----HHHHCCceEEEccCCCHHHHHHHHHHHH
Confidence            35899999999999999999998763       789999874  3332    11111000 000110000111111    


Q ss_pred             ----CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022           80 ----TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        80 ----~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                          ...|++|+.||.....   +.+.   ...+..|+..    .+.+.+.+++..  .+.||++|.
T Consensus        71 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~--~g~iv~isS  135 (277)
T PRK05993         71 ELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG--QGRIVQCSS  135 (277)
T ss_pred             HHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC--CCEEEEECC
Confidence                2469999999875321   1222   3345666654    667777776654  246777764

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.52  E-value=0.00067  Score=57.40  Aligned_cols=104  Identities=13%  Similarity=0.193  Sum_probs=65.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh-hHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-VKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~-~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |||+||||+|.+|+.++..+..+|.       |++.+-+++  .++.. +..-..+.      .+.--+...+++.|-|+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGH-------eVTAivRn~--~K~~~~~~~~i~q~------Difd~~~~a~~l~g~Da   65 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGH-------EVTAIVRNA--SKLAARQGVTILQK------DIFDLTSLASDLAGHDA   65 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCC-------eeEEEEeCh--Hhccccccceeecc------cccChhhhHhhhcCCce
Confidence            6999999999999999999988873       788887775  34422 11101111      11111234578999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ||.+-|.+. ++.  +.+   -.+..+.+...++....  .+++++.-
T Consensus        66 VIsA~~~~~-~~~--~~~---~~k~~~~li~~l~~agv--~RllVVGG  105 (211)
T COG2910          66 VISAFGAGA-SDN--DEL---HSKSIEALIEALKGAGV--PRLLVVGG  105 (211)
T ss_pred             EEEeccCCC-CCh--hHH---HHHHHHHHHHHHhhcCC--eeEEEEcC
Confidence            999977653 221  111   22335667777776553  56777753

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.52  E-value=0.00083  Score=60.24  Aligned_cols=119  Identities=12%  Similarity=0.148  Sum_probs=66.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA--   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a--   78 (332)
                      +.++|.|+||+|.+|+.++..|+..|.       .|.++++++  +.+.....++.......   ..++.-..+...+  
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   80 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-------HVLVNGRNA--ATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFA   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            457999999999999999999998764       799999874  33433333332211000   0011111111222  


Q ss_pred             -----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHH----HHHHhhcCCCeEEEEecCc
Q 020022           79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        79 -----l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~----~~i~~~~~~~~~viv~tNP  133 (332)
                           +...|+||+.+|.....   ..+.   +..+..|+.-...+.    +.+.+..  ...++++|..
T Consensus        81 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~ss~  148 (256)
T PRK06124         81 RIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG--YGRIIAITSI  148 (256)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEeec
Confidence                 23469999999874321   1222   234566665444444    4443333  3467777754

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=97.52  E-value=0.0011  Score=59.78  Aligned_cols=104  Identities=18%  Similarity=0.311  Sum_probs=63.6

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC-CCcEEE
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-GVNIAV   86 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~-~aDiVi   86 (332)
                      |+|+||+|+||+++...|...|-       ++..+-+++  .+..   .++ +.      .+..-....+... ++|+||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh-------~v~iltR~~--~~~~---~~~-~~------~v~~~~~~~~~~~~~~DavI   61 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGH-------QVTILTRRP--PKAS---QNL-HP------NVTLWEGLADALTLGIDAVI   61 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCC-------eEEEEEcCC--cchh---hhc-Cc------cccccchhhhcccCCCCEEE
Confidence            68999999999999999988752       677776653  1111   111 10      1111112233333 799999


Q ss_pred             EeCCCCCCCC-CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe
Q 020022           87 MVGGFPRKEG-ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVV  130 (332)
Q Consensus        87 ~~ag~~~~~~-~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~  130 (332)
                      ..||.|-... -+   -..+...-+...+.+++.|.+...|...+|..
T Consensus        62 NLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isa  109 (297)
T COG1090          62 NLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISA  109 (297)
T ss_pred             ECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEec
Confidence            9999875332 12   23455666788888999998765433334443

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00079  Score=60.96  Aligned_cols=108  Identities=18%  Similarity=0.223  Sum_probs=62.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhh------HHHHhhhhcCCccceEeeCChhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV------KMELVDAAFPLLKGVVATTDAVE   77 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~------~~dl~~~~~~~~~~~~~~~~~~~   77 (332)
                      +.++|.|+||+|.+|++++..|+..|.       +|++.++++.  .+...      ..|+.+.           .+..+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~D~~d~-----------~~~~~   62 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGY-------RVFGTSRNPA--RAAPIPGVELLELDVTDD-----------ASVQA   62 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCChh--hccccCCCeeEEeecCCH-----------HHHHH
Confidence            345899999999999999999998763       7888888742  22110      1111111           11122


Q ss_pred             h-------cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCc
Q 020022           78 A-------CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        78 a-------l~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      +       +...|++|+++|......   .+   ....+..|..-    ++.+.+.+.+.. . .+++++|..
T Consensus        63 ~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~-~~iv~isS~  133 (270)
T PRK06179         63 AVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-S-GRIINISSV  133 (270)
T ss_pred             HHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-ceEEEECCc
Confidence            2       335799999999754221   12   23445556543    444444455543 2 466677653

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00044  Score=61.01  Aligned_cols=36  Identities=19%  Similarity=0.214  Sum_probs=31.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +.++|.|+||+|.+|+.++..|++.|.       ++.++++++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-------~v~~~~r~~   41 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-------RVALIGRGA   41 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-------eEEEEeCCh
Confidence            357999999999999999999998764       789999874

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.0015  Score=60.14  Aligned_cols=120  Identities=16%  Similarity=0.164  Sum_probs=68.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA---   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a---   78 (332)
                      .++|.|+||+|.+|++++..|+..|.       ++.++++++. ..++.....+.......   ..++.-.....+.   
T Consensus        46 ~k~iLItGasggIG~~la~~l~~~G~-------~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~  117 (290)
T PRK06701         46 GKVALITGGDSGIGRAVAVLFAKEGA-------DIAIVYLDEH-EDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEE  117 (290)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCcc-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            46899999999999999999998764       7889988742 22222222222110000   0000000111111   


Q ss_pred             ----cCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           79 ----CTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        79 ----l~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                          +...|+||+.||....  +  ..+.   ...+..|+.....+.+.+.++-.+...+|++|.
T Consensus       118 i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS  182 (290)
T PRK06701        118 TVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS  182 (290)
T ss_pred             HHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence                2357999999986422  1  1222   345677877777777777654223345666664

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.00049  Score=62.62  Aligned_cols=117  Identities=16%  Similarity=0.136  Sum_probs=63.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC-------hhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD-------AVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~-------~~~   77 (332)
                      .++|.|+||+|++|++++..|+..|.       ++.+.++++  +.+......+.........++....+       ..+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-------RVVATARDT--ATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE   73 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHH
Confidence            45899999999999999999988763       788998874  22221111010000000000000001       112


Q ss_pred             hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022           78 ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      .+...|.||+++|.....   ..+   ....+..|+..    .+.+.+.+++.. . ..+|++|.
T Consensus        74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~-~~iv~vsS  136 (275)
T PRK08263         74 HFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-S-GHIIQISS  136 (275)
T ss_pred             HcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C-CEEEEEcC
Confidence            234679999999975321   112   23445667665    455555555543 3 35666653

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.50  E-value=0.0013  Score=64.33  Aligned_cols=66  Identities=18%  Similarity=0.320  Sum_probs=46.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||||.|.+|..++..|...|.       ++.++|+++  +.+...+.++         .+...++..+++.+||+|
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~-------~V~v~~r~~--~~~~~~a~~~---------gv~~~~~~~e~~~~aDvV   62 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGF-------EVIVTGRDP--KKGKEVAKEL---------GVEYANDNIDAAKDADIV   62 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCC-------EEEEEECCh--HHHHHHHHHc---------CCeeccCHHHHhccCCEE
Confidence            4899998779999999999988763       789999874  2221111111         112345667889999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        63 Ilav   66 (437)
T PRK08655         63 IISV   66 (437)
T ss_pred             EEec
Confidence            9985

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.0007  Score=60.12  Aligned_cols=148  Identities=20%  Similarity=0.153  Sum_probs=77.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc---CC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC---TG   81 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al---~~   81 (332)
                      .+++.|+||+|++|++++..|+..|.       ++.++++++  +.++.....+. .. ....++.......+++   ..
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~-~~-~~~~D~~~~~~v~~~~~~~~~   77 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQRGA-------RVVAAARNA--AALDRLAGETG-CE-PLRLDVGDDAAIRAALAAAGA   77 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhC-Ce-EEEecCCCHHHHHHHHHHhCC
Confidence            46899999999999999999998763       789999874  22321111110 00 0000110011112222   35


Q ss_pred             CcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcC---CCeEEEEecCcccchHHHHHHhCCCCCCCc
Q 020022           82 VNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAA---PNCKVLVVANPANTNALILKEFAPSIPAKN  152 (332)
Q Consensus        82 aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~---~~~~viv~tNP~~~~~~~~~~~~~~~~~~~  152 (332)
                      .|+||+.+|.....   ..+   ....+..|+.....+.+.+.+...   ...+++++|.....         .+.+...
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~~~~~  148 (245)
T PRK07060         78 FDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL---------VGLPDHL  148 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc---------CCCCCCc
Confidence            79999999875321   122   223445666655555555544321   12466666643221         1112122


Q ss_pred             EEEechHHHHHHHHHHHHHc
Q 020022          153 ITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       153 i~~~t~lds~r~~~~la~~l  172 (332)
                      .++.+..-..++.+.+++.+
T Consensus       149 ~y~~sK~a~~~~~~~~a~~~  168 (245)
T PRK07060        149 AYCASKAALDAITRVLCVEL  168 (245)
T ss_pred             HhHHHHHHHHHHHHHHHHHH
Confidence            34444544456666666654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.50  E-value=0.0015  Score=58.66  Aligned_cols=119  Identities=18%  Similarity=0.158  Sum_probs=67.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---h----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---A----   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~----   75 (332)
                      +.++|.|+||+|++|++++..|+..|.       ++.+++++.  +.++....++...... ..-+... ++   .    
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~i~~~~~~-~~~~~~Dl~d~~~i~~~~   80 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-------RVVLSARKA--EELEEAAAHLEALGID-ALWIAADVADEADIERLA   80 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCe-EEEEEccCCCHHHHHHHH
Confidence            447899999999999999999998763       688998864  3333222222211100 0001111 11   1    


Q ss_pred             ---hhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhh---cCCCeEEEEecC
Q 020022           76 ---VEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVAN  132 (332)
Q Consensus        76 ---~~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~---~~~~~~viv~tN  132 (332)
                         .+.+...|+||+++|......   .+   ....+..|+.....+.+.+.++   ..+...++++|.
T Consensus        81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS  149 (259)
T PRK08213         81 EETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS  149 (259)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence               111246799999998642111   11   2344567777777777765544   112346666665

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=97.49  E-value=0.00065  Score=63.19  Aligned_cols=73  Identities=29%  Similarity=0.312  Sum_probs=48.6

Q ss_pred             CCCC-CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            1 MAKE-PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~~-~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      |+.+ .+||+||| +|.+|..++..|...+...     +|.++|+++  +.++ ...   ...  .  ......+..+++
T Consensus         1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~~-----~V~~~dr~~--~~~~-~a~---~~g--~--~~~~~~~~~~~~   64 (307)
T PRK07502          1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLAG-----EIVGADRSA--ETRA-RAR---ELG--L--GDRVTTSAAEAV   64 (307)
T ss_pred             CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCCc-----EEEEEECCH--HHHH-HHH---hCC--C--CceecCCHHHHh
Confidence            6644 37999999 7999999999998776322     689999874  2222 111   110  0  111234566778


Q ss_pred             CCCcEEEEeC
Q 020022           80 TGVNIAVMVG   89 (332)
Q Consensus        80 ~~aDiVi~~a   89 (332)
                      ++||+||++.
T Consensus        65 ~~aDvViiav   74 (307)
T PRK07502         65 KGADLVILCV   74 (307)
T ss_pred             cCCCEEEECC
Confidence            9999999985

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.0031  Score=56.06  Aligned_cols=118  Identities=14%  Similarity=0.072  Sum_probs=64.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc----cceEeeCChhhhc--
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL----KGVVATTDAVEAC--   79 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~----~~~~~~~~~~~al--   79 (332)
                      ++|.|+||+|++|.+++..|+..|.       +|.+.|+++  +.+.....++........    .++....+..+.+  
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   72 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-------RLYLAARDV--ERLERLADDLRARGAVAVSTHELDILDTASHAAFLDS   72 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHH
Confidence            5899999999999999999998763       688999874  333322233321110000    0111111122222  


Q ss_pred             --CCCcEEEEeCCCCCC---CCCCHH---HHHHhhHHHHHHHHHHHHhhcC--CCeEEEEecC
Q 020022           80 --TGVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQASALEQHAA--PNCKVLVVAN  132 (332)
Q Consensus        80 --~~aDiVi~~ag~~~~---~~~~r~---~~~~~n~~i~~~i~~~i~~~~~--~~~~viv~tN  132 (332)
                        +..|++|+++|....   .+.+.+   +.+..|+.....+.+.+..+..  +...++++|.
T Consensus        73 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  135 (243)
T PRK07102         73 LPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISS  135 (243)
T ss_pred             HhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence              245999999886422   123333   3456666655555554443311  2345666664

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.49  E-value=0.0015  Score=58.45  Aligned_cols=73  Identities=22%  Similarity=0.207  Sum_probs=46.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      |+.+||+||| +|.+|.+++..|+..+...   .-++..++++. .++++    ++.+.   .  .+..+.+..+.++++
T Consensus         2 m~~~kI~iIG-~G~mg~ala~~l~~~~~~~---~~~i~~~~~~~-~~~~~----~~~~~---~--~~~~~~~~~~~~~~~   67 (245)
T PRK07634          2 LKKHRILFIG-AGRMAEAIFSGLLKTSKEY---IEEIIVSNRSN-VEKLD----QLQAR---Y--NVSTTTDWKQHVTSV   67 (245)
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhCCCCC---cCeEEEECCCC-HHHHH----HHHHH---c--CcEEeCChHHHHhcC
Confidence            3567999999 7999999999988764211   00366777532 23332    22211   0  123445677888999


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+||++.
T Consensus        68 DiViiav   74 (245)
T PRK07634         68 DTIVLAM   74 (245)
T ss_pred             CEEEEec
Confidence            9999983

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.48  E-value=0.00077  Score=60.56  Aligned_cols=154  Identities=11%  Similarity=0.113  Sum_probs=81.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhh---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE---   77 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~---   77 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +++++++++. +.+.   ..+......   ...++....+..+   
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-------~vv~~~~~~~-~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   75 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-------DIVGVGVAEA-PETQ---AQVEALGRKFHFITADLIQQKDIDSIVS   75 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCchH-HHHH---HHHHHcCCeEEEEEeCCCCHHHHHHHHH
Confidence            346899999999999999999998874       7888887531 1111   112111000   0001111111111   


Q ss_pred             ----hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           78 ----ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                          .+...|++|+.||.....   ..+   .+..+..|+..    .+.+.+.+.+.. ..+.+|+++.....       
T Consensus        76 ~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~ii~isS~~~~-------  147 (251)
T PRK12481         76 QAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQG-NGGKIINIASMLSF-------  147 (251)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcC-CCCEEEEeCChhhc-------
Confidence                234579999999975321   122   23345566543    445555554433 23567777653321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.+..-.++.++.--..+-+.++..+.  +..|+
T Consensus       148 --~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~gir  180 (251)
T PRK12481        148 --QGGIRVPSYTASKSAVMGLTRALATELS--QYNIN  180 (251)
T ss_pred             --CCCCCCcchHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence              1112112355555555666777777654  34555

>PRK06398 aldose dehydrogenase; Validated

Probab=97.48  E-value=0.0019  Score=58.24  Aligned_cols=148  Identities=13%  Similarity=0.100  Sum_probs=79.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh-hhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-ALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|.+.++++... .......|+.+....  ..  ......+.+...
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-------~Vi~~~r~~~~~~~~~~~~~D~~~~~~i--~~--~~~~~~~~~~~i   73 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-------NVINFDIKEPSYNDVDYFKVDVSNKEQV--IK--GIDYVISKYGRI   73 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCccccCceEEEEccCCCHHHH--HH--HHHHHHHHcCCC
Confidence            457899999999999999999998763       688888764211 011112233221100  00  000112223568


Q ss_pred             cEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc
Q 020022           83 NIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN  152 (332)
Q Consensus        83 DiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~  152 (332)
                      |++|+.||.....   ..+.   ...+..|+..    .+.+.+.+.+..  .+.+|++|.-...         ...+...
T Consensus        74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~isS~~~~---------~~~~~~~  142 (258)
T PRK06398         74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD--KGVIINIASVQSF---------AVTRNAA  142 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeCcchhc---------cCCCCCc
Confidence            9999999975321   1222   2335666654    444445444432  3567777642211         1112222


Q ss_pred             EEEechHHHHHHHHHHHHHcC
Q 020022          153 ITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       153 i~~~t~lds~r~~~~la~~l~  173 (332)
                      .++.+......+-+.++..++
T Consensus       143 ~Y~~sKaal~~~~~~la~e~~  163 (258)
T PRK06398        143 AYVTSKHAVLGLTRSIAVDYA  163 (258)
T ss_pred             hhhhhHHHHHHHHHHHHHHhC
Confidence            455555555667777777765

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=97.48  E-value=0.00059  Score=62.60  Aligned_cols=65  Identities=11%  Similarity=0.085  Sum_probs=43.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| .|.+|..++..|...|.       +|.++|+++  +.++ ...+.  ..      +...++..+++++||+|
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~-------~V~~~d~~~--~~~~-~a~~~--g~------~~~~~~~~~~~~~aDlV   61 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGH-------TVYGVSRRE--STCE-RAIER--GL------VDEASTDLSLLKDCDLV   61 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCC-------EEEEEECCH--HHHH-HHHHC--CC------cccccCCHhHhcCCCEE
Confidence            4899999 79999999999988763       799999874  2222 11111  10      11112233568999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        62 ilav   65 (279)
T PRK07417         62 ILAL   65 (279)
T ss_pred             EEcC
Confidence            9984

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.47  E-value=0.0058  Score=54.44  Aligned_cols=117  Identities=21%  Similarity=0.152  Sum_probs=66.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCcc--ceEee----C-----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVAT----T-----   73 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~--~~~~~----~-----   73 (332)
                      .++|.|+||+|++|.+++..|+..|.       ++.++|++.  +.+.....++.+.......  .....    .     
T Consensus        12 ~k~vlItG~~g~iG~~la~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~   82 (247)
T PRK08945         12 DRIILVTGAGDGIGREAALTYARHGA-------TVILLGRTE--EKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQL   82 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------cEEEEeCCH--HHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHH
Confidence            46899999999999999999998763       688999874  3333333444332111000  01111    0     


Q ss_pred             --ChhhhcCCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHHHHHHHH----HHHhhcCCCeEEEEecC
Q 020022           74 --DAVEACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        74 --~~~~al~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i~~~i~~----~i~~~~~~~~~viv~tN  132 (332)
                        ...+.+...|+||+.||.....    ..+.   ...+..|+.....+.+    .+.+..  ...++++|.
T Consensus        83 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~--~~~iv~~ss  152 (247)
T PRK08945         83 ADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP--AASLVFTSS  152 (247)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC--CCEEEEEcc
Confidence              1123334689999999864221    2222   3345667664334443    334432  345666665

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.0025  Score=57.25  Aligned_cols=36  Identities=36%  Similarity=0.521  Sum_probs=31.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +.++|.|+||+|++|++++..|+..|.       +|.++++++
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~-------~V~~~~r~~   45 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGA-------RVHVCDVSE   45 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            457999999999999999999998763       789999874

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.46  E-value=0.0011  Score=60.37  Aligned_cols=69  Identities=22%  Similarity=0.267  Sum_probs=46.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ++||+||| +|.+|+.++..|...+. .   +.++.++|+++  +.++.    +.+..     .+....+..+.+.++|+
T Consensus         2 mm~I~iIG-~G~mG~~la~~l~~~g~-~---~~~v~v~~r~~--~~~~~----~~~~~-----g~~~~~~~~~~~~~adv   65 (267)
T PRK11880          2 MKKIGFIG-GGNMASAIIGGLLASGV-P---AKDIIVSDPSP--EKRAA----LAEEY-----GVRAATDNQEAAQEADV   65 (267)
T ss_pred             CCEEEEEe-chHHHHHHHHHHHhCCC-C---cceEEEEcCCH--HHHHH----HHHhc-----CCeecCChHHHHhcCCE
Confidence            46899999 69999999999987652 1   12688999874  33221    21110     12234456677889999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||++.
T Consensus        66 Vil~v   70 (267)
T PRK11880         66 VVLAV   70 (267)
T ss_pred             EEEEc
Confidence            99984

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.0019  Score=57.44  Aligned_cols=149  Identities=15%  Similarity=0.113  Sum_probs=80.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC----C
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT----G   81 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~----~   81 (332)
                      .+|.|+||+|.+|..++..|+..|.       ++.+.++++  ++++.......+.. ....++.-..+..++++    .
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~   71 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-------QVIACGRNQ--SVLDELHTQSANIF-TLAFDVTDHPGTKAALSQLPFI   71 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHhcCCCe-EEEeeCCCHHHHHHHHHhcccC
Confidence            5799999999999999999998764       789999874  33322111100000 00001111111222222    2


Q ss_pred             CcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           82 VNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        82 aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      .|.+|+.+|.....   ..+.   .+.+..|+.....+.+.+..+-.+..+++++|.-...         .+.|....++
T Consensus        72 ~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~---------~~~~~~~~Y~  142 (240)
T PRK06101         72 PELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE---------LALPRAEAYG  142 (240)
T ss_pred             CCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc---------cCCCCCchhh
Confidence            47888888753211   1222   3456778877777777666542233456666542221         1223223456


Q ss_pred             echHHHHHHHHHHHHHcC
Q 020022          156 LTRLDHNRALGQISEKLN  173 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~  173 (332)
                      .+......+.+.++..+.
T Consensus       143 asK~a~~~~~~~l~~e~~  160 (240)
T PRK06101        143 ASKAAVAYFARTLQLDLR  160 (240)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            666666667666665543

>PRK12742 oxidoreductase; Provisional

Probab=97.46  E-value=0.0029  Score=55.93  Aligned_cols=160  Identities=10%  Similarity=0.140  Sum_probs=80.7

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh--
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE--   77 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~--   77 (332)
                      |+. +.++|.|+||+|.+|+.++..|+..|.       ++.+.+... ++.++....++. .. ....++.-.....+  
T Consensus         1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~~l~~~~~-~~-~~~~D~~~~~~~~~~~   70 (237)
T PRK12742          1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGA-------NVRFTYAGS-KDAAERLAQETG-AT-AVQTDSADRDAVIDVV   70 (237)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCC-HHHHHHHHHHhC-Ce-EEecCCCCHHHHHHHH
Confidence            553 457899999999999999999998763       677765532 222221111110 00 00001000001112  


Q ss_pred             -hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022           78 -ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA  150 (332)
Q Consensus        78 -al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~  150 (332)
                       .....|++|+.+|.....   ..+   .+..+..|+.....+...+.+...+.+.+|+++.-...      .  ...+.
T Consensus        71 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~------~--~~~~~  142 (237)
T PRK12742         71 RKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD------R--MPVAG  142 (237)
T ss_pred             HHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc------c--CCCCC
Confidence             234579999999875321   122   23445566654444443333332223456666542210      0  01122


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ...++.+......+.+.+++.++-  ..|+
T Consensus       143 ~~~Y~~sKaa~~~~~~~la~~~~~--~gi~  170 (237)
T PRK12742        143 MAAYAASKSALQGMARGLARDFGP--RGIT  170 (237)
T ss_pred             CcchHHhHHHHHHHHHHHHHHHhh--hCeE
Confidence            234566666666677777777653  3454

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=97.45  E-value=0.0024  Score=56.90  Aligned_cols=124  Identities=22%  Similarity=0.205  Sum_probs=65.1

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV   76 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~   76 (332)
                      |.. +.+++.|+||+|.+|++++..|+..|.       ++.+.+... ++.++....++.+.....   ..++.......
T Consensus         1 ~~~~~~~~~lItG~s~~iG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~   72 (247)
T PRK12935          1 MVQLNGKVAIVTGGAKGIGKAITVALAQEGA-------KVVINYNSS-KEAAENLVNELGKEGHDVYAVQADVSKVEDAN   72 (247)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEcCCc-HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            443 347899999999999999999998763       565554332 223332223332211000   00111111112


Q ss_pred             hhc-------CCCcEEEEeCCCCCCCC------CCHHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecC
Q 020022           77 EAC-------TGVNIAVMVGGFPRKEG------MERKDVMSKNVSIYKAQASALEQHA--APNCKVLVVAN  132 (332)
Q Consensus        77 ~al-------~~aDiVi~~ag~~~~~~------~~r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tN  132 (332)
                      +++       ...|+||+++|......      ...++.+..|+.....+.+.+..+.  .+...++++|.
T Consensus        73 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  143 (247)
T PRK12935         73 RLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS  143 (247)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence            222       34799999999754221      1233456677766555555554331  12345666664

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.0065  Score=54.34  Aligned_cols=158  Identities=15%  Similarity=0.105  Sum_probs=80.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeC-------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT-------   73 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~-------   73 (332)
                      +.+++.|+||+|++|.+++..|+..|.       ++.+.+... .+.++....++......   ...++....       
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-------LVAIHYGNR-KEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYS   74 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-------eEEEEcCCC-HHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHH
Confidence            346899999999999999999998763       577765332 23333233333211000   000000000       


Q ss_pred             Chhhh------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           74 DAVEA------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        74 ~~~~a------l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                      +..+.      ....|++|+.||.....   ..+.   +..+..|+.-...+.+.+.....+.+.||++|.-...     
T Consensus        75 ~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-----  149 (252)
T PRK12747         75 SLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR-----  149 (252)
T ss_pred             HHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc-----
Confidence            01111      12689999999974211   1222   3345567655555544443332223567777653221     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.|....++.++.-...+-+.++..++  +..|+
T Consensus       150 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gir  182 (252)
T PRK12747        150 ----ISLPDFIAYSMTKGAINTMTFTLAKQLG--ARGIT  182 (252)
T ss_pred             ----cCCCCchhHHHHHHHHHHHHHHHHHHHh--HcCCE
Confidence                1122222355556655667777777665  34454

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.45  E-value=0.0019  Score=57.76  Aligned_cols=34  Identities=29%  Similarity=0.341  Sum_probs=29.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ++|.|+||+|++|++++..|+..|.       +++++|++.
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~-------~vi~~~r~~   36 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGF-------DLAINDRPD   36 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecCc
Confidence            5799999999999999999998763       788888753

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.0025  Score=57.19  Aligned_cols=121  Identities=17%  Similarity=0.115  Sum_probs=64.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA   78 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a   78 (332)
                      +++.++|.|+||+|.+|.+++..|+..|.       ++++.++++  +.+ ....++.......   ..++.-..+...+
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~-------~v~~~~r~~--~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGA-------IPVIFGRSA--PDD-EFAEELRALQPRAEFVQVDLTDDAQCRDA   73 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCC-------cEEEEcCCh--hhH-HHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            34457999999999999999999998764       578888764  222 1222332111000   0011101111222


Q ss_pred             c-------CCCcEEEEeCCCCCCCC--C---CHHHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecC
Q 020022           79 C-------TGVNIAVMVGGFPRKEG--M---ERKDVMSKNVSIYKAQASALEQHA-APNCKVLVVAN  132 (332)
Q Consensus        79 l-------~~aDiVi~~ag~~~~~~--~---~r~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tN  132 (332)
                      +       ...|+||+.+|......  .   +..+.+..|+.....+.+.+.++. .....++++|.
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss  140 (258)
T PRK08628         74 VEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISS  140 (258)
T ss_pred             HHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECC
Confidence            2       35799999999643221  1   123445667655555544443321 11234555553

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.44  E-value=0.00073  Score=61.04  Aligned_cols=154  Identities=13%  Similarity=0.118  Sum_probs=79.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh-----hHHHHhhhhcCCccceEeeCChhh
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-----VKMELVDAAFPLLKGVVATTDAVE   77 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~-----~~~dl~~~~~~~~~~~~~~~~~~~   77 (332)
                      +..+++.|+||+|.+|.+++..|+..|.       ++.+.|+++.  .+..     ...|+.+....  ..  ......+
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~-------~v~~~~~~~~--~~~~~~~~~~~~D~~~~~~~--~~--~~~~~~~   73 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGA-------NVVNADIHGG--DGQHENYQFVPTDVSSAEEV--NH--TVAEIIE   73 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCcc--ccccCceEEEEccCCCHHHH--HH--HHHHHHH
Confidence            3457899999999999999999998774       7888888742  2211     11122111100  00  0001122


Q ss_pred             hcCCCcEEEEeCCCCCCC------------CCCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHH
Q 020022           78 ACTGVNIAVMVGGFPRKE------------GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALI  140 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~------------~~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~  140 (332)
                      .+...|++|++||.....            ..+.   ...+..|+.....+.+.+..+.  .+...+|++|.-...    
T Consensus        74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~----  149 (266)
T PRK06171         74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL----  149 (266)
T ss_pred             HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc----
Confidence            234679999999964211            1122   2345666655555554444331  122456666643321    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                           .+.+....++.++.--..+-+.++..+.  +..|+
T Consensus       150 -----~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~gi~  182 (266)
T PRK06171        150 -----EGSEGQSCYAATKAALNSFTRSWAKELG--KHNIR  182 (266)
T ss_pred             -----CCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence                 1112112344444444455566666654  34565

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.002  Score=57.95  Aligned_cols=154  Identities=14%  Similarity=0.125  Sum_probs=81.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-----ccceEeeCChhhh-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----LKGVVATTDAVEA-   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-----~~~~~~~~~~~~a-   78 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +++++|+++  +.++....++.......     ..++.-..+..++ 
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFAREGA-------AVALADLDA--ALAERAAAAIARDVAGARVLAVPADVTDAASVAAAV   77 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHH
Confidence            46899999999999999999998774       789999874  34443333343210000     0011001111122 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                            +...|++|+.||.....   ..+.   ...+..|+...    +.+.+.+.+..  .+.||++|.....      
T Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------  149 (260)
T PRK07063         78 AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG--RGSIVNIASTHAF------  149 (260)
T ss_pred             HHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC--CeEEEEECChhhc------
Confidence                  24689999999964321   1222   23345555443    44445454432  3567777653221      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+..-.++.++..-..+-+.+++.+.  +..|+
T Consensus       150 ---~~~~~~~~Y~~sKaa~~~~~~~la~el~--~~gIr  182 (260)
T PRK07063        150 ---KIIPGCFPYPVAKHGLLGLTRALGIEYA--ARNVR  182 (260)
T ss_pred             ---cCCCCchHHHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence               1112111234444444566666777654  44565

>PRK06182 short chain dehydrogenase; Validated

Probab=97.44  E-value=0.00062  Score=61.85  Aligned_cols=114  Identities=15%  Similarity=0.163  Sum_probs=65.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhc---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEAC---   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al---   79 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       +|++.++++  +.++.    +..... ....++....+..+++   
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~l~~----~~~~~~~~~~~Dv~~~~~~~~~~~~~   68 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-------TVYGAARRV--DKMED----LASLGVHPLSLDVTDEASIKAAVDTI   68 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHH----HHhCCCeEEEeeCCCHHHHHHHHHHH
Confidence            346899999999999999999998763       788888874  33321    111000 0000111111112222   


Q ss_pred             ----CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022           80 ----TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        80 ----~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                          .+.|++|+.+|.....   ..+   .+..+..|...    ++.+.+.+++.. . .+++++|.
T Consensus        69 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~-g~iv~isS  133 (273)
T PRK06182         69 IAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-S-GRIINISS  133 (273)
T ss_pred             HHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-C-CEEEEEcc
Confidence                3789999999975321   112   23445566543    566666776654 2 45667664

>PRK12744 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.0066  Score=54.47  Aligned_cols=157  Identities=11%  Similarity=0.082  Sum_probs=79.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC--chhhhhhhHHHHhhhhcC---CccceEeeCChhhh-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~--~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~a-   78 (332)
                      .+++.|+||+|.+|.+++..|+..|.       ++++++.+.  ..+.++....++......   ...++....+..++ 
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~-------~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   80 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGA-------KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLF   80 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCC-------cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHH
Confidence            46899999999999999999998763       445554432  112222222222211100   00011111111111 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccchHHHHHHhC
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTNALILKEFA  145 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~~~~~~~~~~  145 (332)
                            +...|++|++||.....   ..+   ....+..|+.....+.+.+.+...+.+.++++ +.....       . 
T Consensus        81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-------~-  152 (257)
T PRK12744         81 DDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-------F-  152 (257)
T ss_pred             HHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-------c-
Confidence                  24679999999974321   122   23345667655444444444332222334443 332221       0 


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .|....++.++.....+-+.+++.++  +..|+
T Consensus       153 --~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~  183 (257)
T PRK12744        153 --TPFYSAYAGSKAPVEHFTRAASKEFG--ARGIS  183 (257)
T ss_pred             --CCCcccchhhHHHHHHHHHHHHHHhC--cCceE
Confidence              12122456677767788888888876  34565

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.42  E-value=0.0013  Score=67.74  Aligned_cols=95  Identities=13%  Similarity=0.132  Sum_probs=61.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEE--EEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH--MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~--L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      ..|||.|+||+|++|++++..|...+.       ++.  .-|+.+ .+       .+...             ..+  .+
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~-------~v~~~~~~l~d-~~-------~v~~~-------------i~~--~~  428 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGI-------AYEYGKGRLED-RS-------SLLAD-------------IRN--VK  428 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCC-------eEEeecccccc-HH-------HHHHH-------------HHh--hC
Confidence            357999999999999999999987652       342  112110 00       00000             000  26


Q ss_pred             CcEEEEeCCCCCCCC-----CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           82 VNIAVMVGGFPRKEG-----MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        82 aDiVi~~ag~~~~~~-----~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      .|+||++|+....+.     .+..+.+..|+....++++.++++..   +++++|
T Consensus       429 pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~---~~v~~S  480 (668)
T PLN02260        429 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL---LMMNFA  480 (668)
T ss_pred             CCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC---eEEEEc
Confidence            899999998753221     24556778999999999999998752   344553

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=97.42  E-value=0.00095  Score=61.65  Aligned_cols=65  Identities=20%  Similarity=0.316  Sum_probs=46.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| .|.+|+.++..|+..|.       ++.++|+++  ++.+    .+...      ......+..+++++||+
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~-------~v~~~d~~~--~~~~----~~~~~------g~~~~~~~~e~~~~~d~   61 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGY-------SLVVYDRNP--EAVA----EVIAA------GAETASTAKAVAEQCDV   61 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHC------CCeecCCHHHHHhcCCE
Confidence            35899999 79999999999988653       788999874  2222    11111      12234456778899999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||++.
T Consensus        62 vi~~v   66 (296)
T PRK11559         62 IITML   66 (296)
T ss_pred             EEEeC
Confidence            99984

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.0056  Score=55.63  Aligned_cols=35  Identities=20%  Similarity=0.187  Sum_probs=29.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .+++.|+||+|++|++++..|+..|.       .|+++++++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-------~V~~~~r~~   37 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-------LVIATMRNP   37 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-------EEEEEeCCH
Confidence            45799999999999999999998763       688888764

>PLN02688 pyrroline-5-carboxylate reductase

Probab=97.41  E-value=0.0019  Score=58.72  Aligned_cols=68  Identities=18%  Similarity=0.273  Sum_probs=46.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |||++|| .|.||++++..|+..+...   +.+|..+ |+++  ++++    .+.+.      .+....+..+++++||+
T Consensus         1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~---~~~i~v~~~r~~--~~~~----~~~~~------g~~~~~~~~e~~~~aDv   64 (266)
T PLN02688          1 FRVGFIG-AGKMAEAIARGLVASGVVP---PSRISTADDSNP--ARRD----VFQSL------GVKTAASNTEVVKSSDV   64 (266)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHHCCCCC---cceEEEEeCCCH--HHHH----HHHHc------CCEEeCChHHHHhcCCE
Confidence            5899999 7999999999999876321   2267888 7763  3322    12211      22344566677889999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||++.
T Consensus        65 Vil~v   69 (266)
T PLN02688         65 IILAV   69 (266)
T ss_pred             EEEEE
Confidence            99985

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.40  E-value=0.0022  Score=57.69  Aligned_cols=154  Identities=14%  Similarity=0.113  Sum_probs=79.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChh-------
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAV-------   76 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~-------   76 (332)
                      |+|.|+||+|.+|.+++..|+..|.       ++.+.++++  +.+.....++.+....  ...++....+..       
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~   71 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGA-------RVVISSRNE--ENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAW   71 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHH
Confidence            4899999999999999999998874       789999874  3343333333321100  000110000111       


Q ss_pred             hhcCCCcEEEEeCCCCCC-C----CCCHHHH---HHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           77 EACTGVNIAVMVGGFPRK-E----GMERKDV---MSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~-~----~~~r~~~---~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      +.+...|++|+.+|.... +    ..+.+++   +..|+    -..+.+.+.+.+.. +.+.||++|.-...        
T Consensus        72 ~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~g~iv~isS~~~~--------  142 (259)
T PRK08340         72 ELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK-MKGVLVYLSSVSVK--------  142 (259)
T ss_pred             HhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC-CCCEEEEEeCcccC--------
Confidence            123468999999997421 1    1222222   23332    23444555554322 23567776643221        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       ...|....++.++---..+-+.+++.++  +..|+
T Consensus       143 -~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~gI~  175 (259)
T PRK08340        143 -EPMPPLVLADVTRAGLVQLAKGVSRTYG--GKGIR  175 (259)
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHhC--CCCEE
Confidence             1122212233344444566667777665  45565

>PRK06196 oxidoreductase; Provisional

Probab=97.40  E-value=0.0014  Score=60.94  Aligned_cols=157  Identities=10%  Similarity=0.056  Sum_probs=81.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCCh-------hh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA-------VE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~-------~~   77 (332)
                      .++|.|+||+|++|.+++..|+..|.       +|++.++++  +.++....++..... ...++.-..+.       .+
T Consensus        26 ~k~vlITGasggIG~~~a~~L~~~G~-------~Vv~~~R~~--~~~~~~~~~l~~v~~-~~~Dl~d~~~v~~~~~~~~~   95 (315)
T PRK06196         26 GKTAIVTGGYSGLGLETTRALAQAGA-------HVIVPARRP--DVAREALAGIDGVEV-VMLDLADLESVRAFAERFLD   95 (315)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhhhCeE-EEccCCCHHHHHHHHHHHHh
Confidence            36899999999999999999998763       788999874  333322222221100 00011100011       11


Q ss_pred             hcCCCcEEEEeCCCCCCCC----CCHHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH---hCC
Q 020022           78 ACTGVNIAVMVGGFPRKEG----MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE---FAP  146 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~----~~r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~---~~~  146 (332)
                      .+...|++|+.||....+.    ...+..+..|...    ++.+.+.+.+..  .++||++|............   ...
T Consensus        96 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~~~~~~~~~~~~~~~~  173 (315)
T PRK06196         96 SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA--GARVVALSSAGHRRSPIRWDDPHFTR  173 (315)
T ss_pred             cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCeEEEECCHHhccCCCCccccCccC
Confidence            2356899999999743221    1233445556544    566666666543  35677776421110000000   000


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .+++...++.++.....+.+.+++.+.
T Consensus       174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~  200 (315)
T PRK06196        174 GYDKWLAYGQSKTANALFAVHLDKLGK  200 (315)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhc
Confidence            112122355566665666667777653

>PRK07985 oxidoreductase; Provisional

Probab=97.40  E-value=0.0047  Score=56.95  Aligned_cols=151  Identities=16%  Similarity=0.118  Sum_probs=78.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC----------
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD----------   74 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~----------   74 (332)
                      +++.|+||+|.+|.+++..|+..|.       ++.+.+++.+.+.++.....+.... .....+... ++          
T Consensus        50 k~vlITGas~gIG~aia~~L~~~G~-------~Vi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~  121 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYAREGA-------DVAISYLPVEEEDAQDVKKIIEECG-RKAVLLPGDLSDEKFARSLVHE  121 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCC-------EEEEecCCcchhhHHHHHHHHHHcC-CeEEEEEccCCCHHHHHHHHHH
Confidence            6899999999999999999998774       6788776532222221111111110 000001110 11          


Q ss_pred             hhhhcCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           75 AVEACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      ..+.+...|++|+.||....  +  ..+.   ...+..|+...-.+.+.+..+..+++.||++|.....         .+
T Consensus       122 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~---------~~  192 (294)
T PRK07985        122 AHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAY---------QP  192 (294)
T ss_pred             HHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhc---------cC
Confidence            11234567999999986421  1  2233   3445677765555555554432234567777653221         11


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .+....++.++..-..+-+.+++.++
T Consensus       193 ~~~~~~Y~asKaal~~l~~~la~el~  218 (294)
T PRK07985        193 SPHLLDYAATKAAILNYSRGLAKQVA  218 (294)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHh
Confidence            22112345555444556666666653

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.0012  Score=60.97  Aligned_cols=118  Identities=19%  Similarity=0.182  Sum_probs=65.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhh---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE---   77 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~---   77 (332)
                      ..++|.|+||+|.+|.+++..|+..|.       +|.+.+++.  +.++....++......   ...++....+..+   
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-------~Vi~~~R~~--~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~  109 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-------TVVAVARRE--DLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVA  109 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            347899999999999999999998763       799999874  4444333333211000   0001100011112   


Q ss_pred             ----hcCCCcEEEEeCCCCCCCC-----CCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022           78 ----ACTGVNIAVMVGGFPRKEG-----MER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~~-----~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                          .+...|++|+.||......     .+.   ...+..|..    .++.+.+.+.+..  ...++++|.
T Consensus       110 ~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS  178 (293)
T PRK05866        110 DVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG--DGHIINVAT  178 (293)
T ss_pred             HHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECC
Confidence                2347899999998753211     011   223445543    3555555555543  245666654

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=97.39  E-value=0.0013  Score=61.15  Aligned_cols=125  Identities=20%  Similarity=0.242  Sum_probs=74.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+|+| +|.||+.++..|.+.+ .      .+.++-+++..+.++..-+.+.+... .......+....+.+..+|+|
T Consensus         1 mkI~IlG-aGAvG~l~g~~L~~~g-~------~V~~~~R~~~~~~l~~~GL~i~~~~~-~~~~~~~~~~~~~~~~~~Dlv   71 (307)
T COG1893           1 MKILILG-AGAIGSLLGARLAKAG-H------DVTLLVRSRRLEALKKKGLRIEDEGG-NFTTPVVAATDAEALGPADLV   71 (307)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHhCC-C------eEEEEecHHHHHHHHhCCeEEecCCC-ccccccccccChhhcCCCCEE
Confidence            5999999 6999999999999986 2      46666655311222211122222111 001122233455667899999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechH
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRL  159 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~l  159 (332)
                      |++.-..                -..+..+.+..+..++++|+..-|=++..- .+.++   ++.+++ .|.|..
T Consensus        72 iv~vKa~----------------q~~~al~~l~~~~~~~t~vl~lqNG~g~~e-~l~~~---~~~~~il~G~~~~  126 (307)
T COG1893          72 IVTVKAY----------------QLEEALPSLAPLLGPNTVVLFLQNGLGHEE-ELRKI---LPKETVLGGVTTH  126 (307)
T ss_pred             EEEeccc----------------cHHHHHHHhhhcCCCCcEEEEEeCCCcHHH-HHHHh---CCcceEEEEEeee
Confidence            9995322                133666777777777777887888766444 44443   465654 444544

>PRK06924 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.0013  Score=58.74  Aligned_cols=34  Identities=15%  Similarity=0.177  Sum_probs=29.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ++|.|+||+|.+|+.++..|+..|.       +|.++++++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~-------~V~~~~r~~   35 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGT-------HVISISRTE   35 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCC-------EEEEEeCCc
Confidence            4799999999999999999998763       688888764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.39  E-value=0.0036  Score=56.90  Aligned_cols=35  Identities=26%  Similarity=0.344  Sum_probs=30.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .+++.|+||+|.+|++++..|+..|.       +++++|+++
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~G~-------~V~~~~r~~   44 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARAGA-------KVAILDRNQ   44 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            46899999999999999999998764       789999874

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0011  Score=61.46  Aligned_cols=156  Identities=13%  Similarity=0.069  Sum_probs=83.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC------hhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD------AVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~------~~~   77 (332)
                      .++|.|+||+|++|++++..|+..|.       ++++++++.  +.+.....++.... + ..++.. ..|      ..+
T Consensus        16 ~k~vlItGas~gIG~~~a~~l~~~G~-------~vi~~~r~~--~~~~~~~~~l~~~~-~-~~~~~~~~~Dl~d~~~v~~   84 (306)
T PRK06197         16 GRVAVVTGANTGLGYETAAALAAKGA-------HVVLAVRNL--DKGKAAAARITAAT-P-GADVTLQELDLTSLASVRA   84 (306)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhC-C-CCceEEEECCCCCHHHHHH
Confidence            46899999999999999999998763       688888864  33322222332110 0 001110 011      111


Q ss_pred             -------hcCCCcEEEEeCCCCCCCC----CCHHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccch-HHH-
Q 020022           78 -------ACTGVNIAVMVGGFPRKEG----MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTN-ALI-  140 (332)
Q Consensus        78 -------al~~aDiVi~~ag~~~~~~----~~r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~-~~~-  140 (332)
                             .+...|+||+.||....+.    ...+..+..|...    .+.+.+.+++..  .++||++|...... ... 
T Consensus        85 ~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~~~~~~~~~  162 (306)
T PRK06197         85 AADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP--GSRVVTVSSGGHRIRAAIH  162 (306)
T ss_pred             HHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC--CCEEEEECCHHHhccCCCC
Confidence                   1246899999998643211    1223345566554    666777766543  34677776432110 000 


Q ss_pred             HHHh--CCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          141 LKEF--APSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       141 ~~~~--~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      ....  ...+++...++.+.+-...+.+.+++.+.
T Consensus       163 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~  197 (306)
T PRK06197        163 FDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLA  197 (306)
T ss_pred             ccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            0000  00112222356666666777777888765

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.37  E-value=0.0045  Score=56.53  Aligned_cols=156  Identities=19%  Similarity=0.213  Sum_probs=92.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-c----cceEeeCChh--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-L----KGVVATTDAV--   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~----~~~~~~~~~~--   76 (332)
                      ..+.|.|+||+..+|.++|+.|+..|.       .++|+.+..  ++++....++....... .    ..++-..+..  
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~-------~l~lvar~~--rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~   81 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGA-------KLVLVARRA--RRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKF   81 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-------ceEEeehhh--hhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHH
Confidence            457899999999999999999999875       466776653  45554445554432211 0    0111111111  


Q ss_pred             -----hhcCCCcEEEEeCCCCCCCCC----CH---HHHHH----hhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           77 -----EACTGVNIAVMVGGFPRKEGM----ER---KDVMS----KNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        77 -----~al~~aDiVi~~ag~~~~~~~----~r---~~~~~----~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                           .-+.+.|+.|..||+.+ .+.    +.   ...+.    ..+-..+...+.+++..  ++.|++++....-+   
T Consensus        82 ~~~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~--~GhIVvisSiaG~~---  155 (282)
T KOG1205|consen   82 VEWAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN--DGHIVVISSIAGKM---  155 (282)
T ss_pred             HHHHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC--CCeEEEEecccccc---
Confidence                 34568999999999987 331    11   12333    34578888999998875  46777777655421   


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                            .+|..-++..+.-.-..|-..|...+.-....|.
T Consensus       156 ------~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~  189 (282)
T KOG1205|consen  156 ------PLPFRSIYSASKHALEGFFETLRQELIPLGTIII  189 (282)
T ss_pred             ------CCCcccccchHHHHHHHHHHHHHHHhhccCceEE
Confidence                  2343335555555444555555555544333343

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=97.37  E-value=0.00077  Score=61.38  Aligned_cols=151  Identities=13%  Similarity=0.185  Sum_probs=93.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--CCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~aD   83 (332)
                      |||.|+|++|++|+.|...|. .+       .++.-.|..+         +|+.+..           ...+.++  .-|
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~-------~~v~a~~~~~---------~Ditd~~-----------~v~~~i~~~~PD   52 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GE-------FEVIATDRAE---------LDITDPD-----------AVLEVIRETRPD   52 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CC-------ceEEeccCcc---------ccccChH-----------HHHHHHHhhCCC
Confidence            469999999999999998886 22       1666666542         4554432           2334444  459


Q ss_pred             EEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC-cc--cchHHHHHHhCCCC-CCCcEEEec
Q 020022           84 IAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-PA--NTNALILKEFAPSI-PAKNITCLT  157 (332)
Q Consensus        84 iVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN-P~--~~~~~~~~~~~~~~-~~~~i~~~t  157 (332)
                      +||++|.++.-  ...+++.-+..|+.....+++...+.+   +++|.+|. -|  ..-. -.++. +.. .|-.++|-|
T Consensus        53 vVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g---a~lVhiSTDyVFDG~~~-~~Y~E-~D~~~P~nvYG~s  127 (281)
T COG1091          53 VVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG---ARLVHISTDYVFDGEKG-GPYKE-TDTPNPLNVYGRS  127 (281)
T ss_pred             EEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC---CeEEEeecceEecCCCC-CCCCC-CCCCCChhhhhHH
Confidence            99999998753  234566677899999999999999886   56677763 22  1000 00000 111 233578888


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCcee
Q 020022          158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY  193 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v  193 (332)
                      ++....+....    +-+.-=++...|+|++|.+.+
T Consensus       128 Kl~GE~~v~~~----~~~~~I~Rtswv~g~~g~nFv  159 (281)
T COG1091         128 KLAGEEAVRAA----GPRHLILRTSWVYGEYGNNFV  159 (281)
T ss_pred             HHHHHHHHHHh----CCCEEEEEeeeeecCCCCCHH
Confidence            88765554333    222233455556899886554

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0096  Score=56.02  Aligned_cols=116  Identities=19%  Similarity=0.136  Sum_probs=65.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE---   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~---   77 (332)
                      .++|.|+||+|.+|..++..|+..|.       +|+++++++  +.++....++...... ..-+... ++   ..+   
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~-------~Vvl~~R~~--~~l~~~~~~l~~~g~~-~~~v~~Dv~d~~~v~~~~~   77 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGA-------KVVLLARGE--EGLEALAAEIRAAGGE-ALAVVADVADAEAVQAAAD   77 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHcCCc-EEEEEecCCCHHHHHHHHH
Confidence            36899999999999999999998764       789999874  4444333333321100 0001110 11   111   


Q ss_pred             ----hcCCCcEEEEeCCCCCCC---CCCHHH---HHHhh----HHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           78 ----ACTGVNIAVMVGGFPRKE---GMERKD---VMSKN----VSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~---~~~r~~---~~~~n----~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                          .+...|++|+.+|.....   ..+.++   .+..|    +...+.+.+.+.+..  ...+|+++.
T Consensus        78 ~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~--~g~iV~isS  144 (334)
T PRK07109         78 RAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD--RGAIIQVGS  144 (334)
T ss_pred             HHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEeCC
Confidence                134689999999874321   122222   23333    445566666666543  245666664

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0016  Score=58.54  Aligned_cols=39  Identities=38%  Similarity=0.489  Sum_probs=32.5

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |++ ..+++.|+||+|.+|++++..|+..|.       +++++++++
T Consensus         1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~-------~Vv~~~r~~   40 (263)
T PRK08226          1 MGKLTGKTALITGALQGIGEGIARVFARHGA-------NLILLDISP   40 (263)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCCH
Confidence            543 457999999999999999999998764       789999874

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0011  Score=59.00  Aligned_cols=121  Identities=17%  Similarity=0.190  Sum_probs=66.2

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---h
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---A   75 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~   75 (332)
                      |+. .++++.|+||+|.+|..++..|+..|.       .|.++++++  +.+.....++...... ..-+... ++   .
T Consensus         1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~   70 (241)
T PRK07454          1 MSLNSMPRALITGASSGIGKATALAFAKAGW-------DLALVARSQ--DALEALAAELRSTGVK-AAAYSIDLSNPEAI   70 (241)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhCCCc-EEEEEccCCCHHHH
Confidence            664 346899999999999999999998764       689999874  2232222222211000 0001110 11   1


Q ss_pred             hhh-------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCc
Q 020022           76 VEA-------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        76 ~~a-------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      ..+       +...|+||+.+|.....   ..+   ....+..|+..    .+.+.+.+.+..  ...++++|..
T Consensus        71 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~  143 (241)
T PRK07454         71 APGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG--GGLIINVSSI  143 (241)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC--CcEEEEEccH
Confidence            112       24589999999975321   112   23345556554    444445454432  3456666643

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=97.36  E-value=0.0015  Score=64.26  Aligned_cols=98  Identities=13%  Similarity=0.011  Sum_probs=60.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC---CC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---GV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~---~a   82 (332)
                      .+|+||| .|.+|+++|..|+..|.       +|.+||+++  ++.+    ++.+........+....+..++++   ++
T Consensus         2 ~~IgvIG-LG~MG~~lA~nL~~~G~-------~V~v~dr~~--~~~~----~l~~~~~~~g~~i~~~~s~~e~v~~l~~~   67 (470)
T PTZ00142          2 SDIGLIG-LAVMGQNLALNIASRGF-------KISVYNRTY--EKTE----EFVKKAKEGNTRVKGYHTLEELVNSLKKP   67 (470)
T ss_pred             CEEEEEe-EhHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHH----HHHHhhhhcCCcceecCCHHHHHhcCCCC
Confidence            4899999 79999999999998774       799999984  3332    222110000112334556666665   58


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |+||+..-               +-+.++++.+.+..+-.++.++|..+|
T Consensus        68 d~Iil~v~---------------~~~~v~~vi~~l~~~L~~g~iIID~gn  102 (470)
T PTZ00142         68 RKVILLIK---------------AGEAVDETIDNLLPLLEKGDIIIDGGN  102 (470)
T ss_pred             CEEEEEeC---------------ChHHHHHHHHHHHhhCCCCCEEEECCC
Confidence            98887732               112344444455544446667777876

>PRK08219 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.00099  Score=58.38  Aligned_cols=115  Identities=22%  Similarity=0.253  Sum_probs=61.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~---   80 (332)
                      ++++|.|+||+|++|+.++..|+.. .       ++.+++++.  +.++....++.+.. ....++.-..+..++++   
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~   70 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-H-------TLLLGGRPA--ERLDELAAELPGAT-PFPVDLTDPEAIAAAVEQLG   70 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-C-------CEEEEeCCH--HHHHHHHHHhccce-EEecCCCCHHHHHHHHHhcC
Confidence            4568999999999999999999875 2       688998873  22211111111100 00011111112334443   


Q ss_pred             CCcEEEEeCCCCCCC---CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022           81 GVNIAVMVGGFPRKE---GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +.|+||+++|.....   ..+..   ..+..|...    .+.+.+.+++.   ...++++|.
T Consensus        71 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~v~~ss  129 (227)
T PRK08219         71 RLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA---HGHVVFINS  129 (227)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCeEEEEcc
Confidence            689999999875321   11222   234555555    44444444433   234666654

>PRK06928 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.35  E-value=0.0023  Score=58.65  Aligned_cols=101  Identities=13%  Similarity=0.136  Sum_probs=60.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+||| +|.+|++++..|...+.+.   +.++.++++++ +++++    .+... .   ..+..+.+..++++++|+|
T Consensus         2 ~~I~iIG-~G~mG~ala~~L~~~g~~~---~~~V~~~~r~~-~~~~~----~l~~~-~---~~~~~~~~~~e~~~~aDvV   68 (277)
T PRK06928          2 EKIGFIG-YGSMADMIATKLLETEVAT---PEEIILYSSSK-NEHFN----QLYDK-Y---PTVELADNEAEIFTKCDHS   68 (277)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCCC---cccEEEEeCCc-HHHHH----HHHHH-c---CCeEEeCCHHHHHhhCCEE
Confidence            5899999 7999999999998876321   12688998763 22222    11111 0   1223445666778999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      |++.-.                ..++++++.+..+-.++..+|.+.+-++
T Consensus        69 ilavpp----------------~~~~~vl~~l~~~l~~~~~ivS~~aGi~  102 (277)
T PRK06928         69 FICVPP----------------LAVLPLLKDCAPVLTPDRHVVSIAAGVS  102 (277)
T ss_pred             EEecCH----------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence            988421                2233555555444334555666666443

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.35  E-value=0.003  Score=57.04  Aligned_cols=150  Identities=14%  Similarity=0.161  Sum_probs=79.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCCh-----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDA-----   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~-----   75 (332)
                      ..+++.|+||+|.+|.+++..|+..|.       ++++.++++  +.++....++.......   ..++.-....     
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-------~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-------TIVFNDINQ--ELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVS   79 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            346899999999999999999998763       688888764  33433333332211000   0011000011     


Q ss_pred             --hhhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           76 --VEACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        76 --~~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                        .+.+...|++|+.+|.....   ..+.+   ..+..|..    ..+.+.+.+.+..  .+.|++++.....       
T Consensus        80 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~isS~~~~-------  150 (265)
T PRK07097         80 QIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG--HGKIINICSMMSE-------  150 (265)
T ss_pred             HHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC--CcEEEEEcCcccc-------
Confidence              12234579999999974311   12222   23345554    3344455554432  3567777754321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                        .+.+....++.++.--..+.+.+++.++
T Consensus       151 --~~~~~~~~Y~~sKaal~~l~~~la~e~~  178 (265)
T PRK07097        151 --LGRETVSAYAAAKGGLKMLTKNIASEYG  178 (265)
T ss_pred             --CCCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence              1112222455555554566667777654

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.34  E-value=0.002  Score=58.54  Aligned_cols=170  Identities=14%  Similarity=0.073  Sum_probs=102.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CC---c-cceEeeCChhhhcC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PL---L-KGVVATTDAVEACT   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~---~-~~~~~~~~~~~al~   80 (332)
                      |++.|+||+||+|++++..++....   +  .+|..+|.-.-    .|....|.+... +.   . ..+.........++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~---d--~~v~~~DkLTY----Agn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~   71 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHP---D--DHVVNLDKLTY----AGNLENLADVEDSPRYRFVQGDICDRELVDRLFK   71 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCC---C--ceEEEEecccc----cCCHHHHHhhhcCCCceEEeccccCHHHHHHHHH
Confidence            5899999999999999998887532   1  26788885431    222222322221 11   0 11111112334455


Q ss_pred             --CCcEEEEeCCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC-cc--cchH--HHHHHhCCCCCCC
Q 020022           81 --GVNIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-PA--NTNA--LILKEFAPSIPAK  151 (332)
Q Consensus        81 --~aDiVi~~ag~~~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN-P~--~~~~--~~~~~~~~~~~~~  151 (332)
                        +.|+|++.|.-+.  +.-.....+.+.|+--...+.+.++++.. .-+++-+|. -|  ++..  ..+.+. +.+.|+
T Consensus        72 ~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~-~frf~HISTDEVYG~l~~~~~~FtE~-tp~~Ps  149 (340)
T COG1088          72 EYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWG-KFRFHHISTDEVYGDLGLDDDAFTET-TPYNPS  149 (340)
T ss_pred             hcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcc-cceEEEeccccccccccCCCCCcccC-CCCCCC
Confidence              6899999875432  11134567899999999999999999973 235666653 11  1100  012222 346666


Q ss_pred             cEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe
Q 020022          152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG  186 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G  186 (332)
                      .-++.+.-.+--|.+...+.+|++..=.++.+-.|
T Consensus       150 SPYSASKAasD~lVray~~TYglp~~ItrcSNNYG  184 (340)
T COG1088         150 SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYG  184 (340)
T ss_pred             CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcC
Confidence            77777777777888889999999754444443334

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.34  E-value=0.0033  Score=56.40  Aligned_cols=154  Identities=14%  Similarity=0.090  Sum_probs=78.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChh----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV----   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~----   76 (332)
                      ..+.+.|+||+|.+|.+++..|+..|.       +++++|..+.++    ...++......   ...++....+..    
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-------~vv~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   77 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-------DIVGINIVEPTE----TIEQVTALGRRFLSLTADLRKIDGIPALLE   77 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEecCcchHH----HHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            346899999999999999999998763       678888754211    11122111000   000110000111    


Q ss_pred             ---hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           77 ---EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        77 ---~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                         +.+...|++|++||.....   +.+   ....+..|....-.+    .+.+.+.. +.+.++++|.-...       
T Consensus        78 ~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~g~iv~isS~~~~-------  149 (253)
T PRK08993         78 RAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQG-NGGKIINIASMLSF-------  149 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC-CCeEEEEECchhhc-------
Confidence               1234689999999975321   122   334456666544434    44443332 23567776642211       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.+..-.++.++.--..+-+.+++.+.  +..|+
T Consensus       150 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~  182 (253)
T PRK08993        150 --QGGIRVPSYTASKSGVMGVTRLMANEWA--KHNIN  182 (253)
T ss_pred             --cCCCCCcchHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence              1111111345555544455666666654  34554

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.34  E-value=0.0029  Score=57.89  Aligned_cols=69  Identities=19%  Similarity=0.338  Sum_probs=46.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+||| +|.||++++..|+..+...   +.+|..+|+++  +.++    .+.+. .    .+....+..+.+++||+|
T Consensus         3 ~~IgfIG-~G~MG~aia~~L~~~g~~~---~~~I~v~~r~~--~~~~----~l~~~-~----g~~~~~~~~e~~~~aDiI   67 (272)
T PRK12491          3 KQIGFIG-CGNMGIAMIGGMINKNIVS---PDQIICSDLNV--SNLK----NASDK-Y----GITITTNNNEVANSADIL   67 (272)
T ss_pred             CeEEEEC-ccHHHHHHHHHHHHCCCCC---CceEEEECCCH--HHHH----HHHHh-c----CcEEeCCcHHHHhhCCEE
Confidence            4799999 7999999999999876422   12689999863  3332    12211 0    123345566778999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        68 iLav   71 (272)
T PRK12491         68 ILSI   71 (272)
T ss_pred             EEEe
Confidence            9984

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.33  E-value=0.00059  Score=61.36  Aligned_cols=112  Identities=15%  Similarity=0.137  Sum_probs=62.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcC-CccceEe-eCChhhhc-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP-LLKGVVA-TTDAVEAC-   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~-~~~~~~~-~~~~~~al-   79 (332)
                      .++||.|+||+|++|+.++..|+..+.       +|+++.++.  +.+...   +.+. ... ...++.. .....+++ 
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-------~V~~~~R~~--~~~~~~---~~~~~~~~~~~~Dl~d~~~~l~~~~~   83 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-------AVKAGVRDV--DKAKTS---LPQDPSLQIVRADVTEGSDKLVEAIG   83 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-------EEEEEecCH--HHHHHh---cccCCceEEEEeeCCCCHHHHHHHhh
Confidence            357999999999999999999988653       677766653  222111   1100 000 0001100 01234556 


Q ss_pred             CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      .++|+||+++|.....+.  .+....|......+.+.+.+...  .+++++|
T Consensus        84 ~~~d~vi~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~--~~iV~iS  131 (251)
T PLN00141         84 DDSDAVICATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGV--TRFILVS  131 (251)
T ss_pred             cCCCEEEECCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCC--CEEEEEc
Confidence            689999999886432211  11123455556677777776542  3555554

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=97.32  E-value=0.0013  Score=52.84  Aligned_cols=102  Identities=17%  Similarity=0.108  Sum_probs=53.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .+||+||| +|.||.+|+..|...|.       +|.-+ .++.  +    ....+.+..    ..... .+..+.++.+|
T Consensus        10 ~l~I~iIG-aGrVG~~La~aL~~ag~-------~v~~v~srs~--~----sa~~a~~~~----~~~~~-~~~~~~~~~aD   70 (127)
T PF10727_consen   10 RLKIGIIG-AGRVGTALARALARAGH-------EVVGVYSRSP--A----SAERAAAFI----GAGAI-LDLEEILRDAD   70 (127)
T ss_dssp             --EEEEEC-TSCCCCHHHHHHHHTTS-------EEEEESSCHH-------HHHHHHC------TT------TTGGGCC-S
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEEeCCc--c----ccccccccc----ccccc-cccccccccCC
Confidence            48999999 69999999999998763       45444 3331  1    112222111    11112 24668889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh--cCCCeEEEEec--CcccchHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH--AAPNCKVLVVA--NPANTNALIL  141 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~--~~~~~~viv~t--NP~~~~~~~~  141 (332)
                      ++|++.     ++.           .+.+++++|..+  -.|+.+|+-.|  -+++++..+.
T Consensus        71 lv~iav-----pDd-----------aI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~~  116 (127)
T PF10727_consen   71 LVFIAV-----PDD-----------AIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPAR  116 (127)
T ss_dssp             EEEE-S------CC-----------HHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHHH
T ss_pred             EEEEEe-----chH-----------HHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhHH
Confidence            999994     221           245677777765  22454444443  3566666643

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0031  Score=55.67  Aligned_cols=34  Identities=21%  Similarity=0.281  Sum_probs=29.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ||+.|+||+|.+|++++..|+..|.       +++++++++
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~-------~v~~~~r~~   34 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGH-------KVTLVGARR   34 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            4799999999999999999998763       788998874

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.014  Score=53.01  Aligned_cols=154  Identities=14%  Similarity=0.113  Sum_probs=79.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC----------
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD----------   74 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~----------   74 (332)
                      +++.|+||+|.+|..++..|+..|.       .+.++++++  +.++....++..........+... ++          
T Consensus         1 k~vlItGas~giG~~la~~la~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA-------ELFLTDRDA--DGLAQTVADARALGGTVPEHRALDISDYDAVAAFAAD   71 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH
Confidence            4799999999999999999998763       688998874  333323233322110000001110 11          


Q ss_pred             hhhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHH----HHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           75 AVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~----i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      ..+.+...|+||+.+|.....   ..+.   ...+..|+.....+.+.    +.+.. +.+.++++|.....        
T Consensus        72 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~g~ii~isS~~~~--------  142 (272)
T PRK07832         72 IHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAG-RGGHLVNVSSAAGL--------  142 (272)
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCcEEEEEcccccc--------
Confidence            112245689999999875321   1222   23456666544444444    33322 23567777654321        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.|....++.+......+...++..+.  +.+|+
T Consensus       143 -~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~i~  175 (272)
T PRK07832        143 -VALPWHAAYSASKFGLRGLSEVLRFDLA--RHGIG  175 (272)
T ss_pred             -CCCCCCcchHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence             1222222344454444445555655443  34455

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=97.31  E-value=0.0029  Score=56.40  Aligned_cols=116  Identities=18%  Similarity=0.195  Sum_probs=63.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeC-------Ch
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATT-------DA   75 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~-------~~   75 (332)
                      ++|.|+||+|++|+.++..|+..|.       +++++++++  +..+....++.......   ..++.-..       ..
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-------NVVVNDLGE--AGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAA   72 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            4799999999999999999998763       789999874  22322222222111000   00000000       12


Q ss_pred             hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecC
Q 020022           76 VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVAN  132 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tN  132 (332)
                      .+.+.+.|+||+.+|.....   ..+.   ...+..|......+.+.+    ++..  ...++++|.
T Consensus        73 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~~~v~~ss  137 (255)
T TIGR01963        73 AAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG--WGRIINIAS  137 (255)
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEEcc
Confidence            23456789999999864311   1122   233455665544444443    4443  235666654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.30  E-value=0.0019  Score=57.13  Aligned_cols=30  Identities=37%  Similarity=0.357  Sum_probs=25.1

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhccc
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVM   30 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~   30 (332)
                      |+. ++++|.|+||+|.+|+.++..|++.|.
T Consensus         1 ~~~~~~~~vlItGasg~iG~~l~~~l~~~g~   31 (249)
T PRK12825          1 MGSLMGRVALVTGAARGLGRAIALRLARAGA   31 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC
Confidence            443 456899999999999999999998764

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=97.30  E-value=0.0013  Score=60.73  Aligned_cols=63  Identities=24%  Similarity=0.337  Sum_probs=45.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEE
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV   86 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi   86 (332)
                      ||+||| .|.+|+.++..|+..|.       +|.++|+++  ++++    .+.+..      ....++..+++++||+||
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~-------~V~~~dr~~--~~~~----~~~~~g------~~~~~~~~~~~~~aDivi   60 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGY-------QLHVTTIGP--EVAD----ELLAAG------AVTAETARQVTEQADVIF   60 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHCC------CcccCCHHHHHhcCCEEE
Confidence            599999 79999999999998763       799999874  3332    122211      112345678899999999


Q ss_pred             EeC
Q 020022           87 MVG   89 (332)
Q Consensus        87 ~~a   89 (332)
                      ++.
T Consensus        61 ~~v   63 (291)
T TIGR01505        61 TMV   63 (291)
T ss_pred             Eec
Confidence            984

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK12827 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0062  Score=54.00  Aligned_cols=117  Identities=21%  Similarity=0.254  Sum_probs=65.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC--chhhhhhhHHHHhhhhcCCccceEe-eC------C
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVA-TT------D   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~--~~~~l~~~~~dl~~~~~~~~~~~~~-~~------~   74 (332)
                      +.++|.|+||+|++|++++..|+..|.       ++++++...  +++.++....++...    ..++.. ..      .
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~   73 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGA-------DVIVLDIHPMRGRAEADAVAAGIEAA----GGKALGLAFDVRDFAA   73 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEcCcccccHHHHHHHHHHHHhc----CCcEEEEEccCCCHHH
Confidence            457999999999999999999998763       688877532  112222111122111    011111 01      1


Q ss_pred             hhhh-------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHH-----hhcCCCeEEEEecCc
Q 020022           75 AVEA-------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE-----QHAAPNCKVLVVANP  133 (332)
Q Consensus        75 ~~~a-------l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~-----~~~~~~~~viv~tNP  133 (332)
                      ..++       ....|+||+.+|.....   ..+.   ...+..|......+.+.+.     +.. . ..+++++..
T Consensus        74 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~-~~iv~~sS~  148 (249)
T PRK12827         74 TRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-G-GRIVNIASV  148 (249)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-C-eEEEEECCc
Confidence            1122       24689999999975421   1222   2345677777777776665     222 2 456666643

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=97.29  E-value=0.0027  Score=56.67  Aligned_cols=35  Identities=31%  Similarity=0.302  Sum_probs=30.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ..+++.|+||+|++|+.++..|+..|.       ++.+++++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-------~v~~~~~~   41 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-------KVIGFDQA   41 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecc
Confidence            347899999999999999999998764       78888876

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.29  E-value=0.0014  Score=58.86  Aligned_cols=146  Identities=16%  Similarity=0.065  Sum_probs=77.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeC--Chhh----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATT--DAVE----   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~--~~~~----   77 (332)
                      .+++.|+||+|++|++++..|+..|.       +++++|+++.   ......++....... ......+.  +..+    
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~G~-------~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAEGA-------RVVLVDRSEL---VHEVAAELRAAGGEALALTADLETYAGAQAAMAA   77 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCchH---HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHH
Confidence            46899999999999999999998764       7889998631   111122222110000 00011110  1111    


Q ss_pred             ---hcCCCcEEEEeCCCCC--CC--CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           78 ---ACTGVNIAVMVGGFPR--KE--GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        78 ---al~~aDiVi~~ag~~~--~~--~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                         .+...|++|+.||...  .+  ..+..   ..+..|+    ...+.+.+.+.+.. . .+|+++|....        
T Consensus        78 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-g~iv~~sS~~~--------  147 (260)
T PRK12823         78 AVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-G-GAIVNVSSIAT--------  147 (260)
T ss_pred             HHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-CeEEEEcCccc--------
Confidence               1346899999998532  11  12222   2334444    34556666665543 2 45666664221        


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      +  + +..-.++.++.-...+.+.+++.+.
T Consensus       148 ~--~-~~~~~Y~~sK~a~~~~~~~la~e~~  174 (260)
T PRK12823        148 R--G-INRVPYSAAKGGVNALTASLAFEYA  174 (260)
T ss_pred             c--C-CCCCccHHHHHHHHHHHHHHHHHhc
Confidence            0  1 1112356666665677777777763

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.28  E-value=0.0051  Score=55.16  Aligned_cols=157  Identities=16%  Similarity=0.101  Sum_probs=80.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEee--CC------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVAT--TD------   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~--~~------   74 (332)
                      ..++|.|+||+|.+|++++..|+..|.       ++++.+++.  +.++....++.+..... ......+  .+      
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-------~vv~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~   80 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-------SVVVSDINA--DAANHVVDEIQQLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            357999999999999999999998764       688888764  33332333333211000 0001111  01      


Q ss_pred             -hhhhcCCCcEEEEeCCCCCC--CCCCHHH---HHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHHHHhCC
Q 020022           75 -AVEACTGVNIAVMVGGFPRK--EGMERKD---VMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        75 -~~~al~~aDiVi~~ag~~~~--~~~~r~~---~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                       ..+.+...|++|+.+|....  ...+..+   .+..|+.-...+.+.+..+-  .+.+.++++|.-...         .
T Consensus        81 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~---------~  151 (255)
T PRK06113         81 FALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE---------N  151 (255)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc---------C
Confidence             11223467999999986432  1223333   35667665555555543221  122456666643221         1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.+....++.+..-...+.+.+++.+.  +..|+
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~i~  183 (255)
T PRK06113        152 KNINMTSYASSKAAASHLVRNMAFDLG--EKNIR  183 (255)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence            112112344444444455555665543  45565

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=97.27  E-value=0.0026  Score=58.99  Aligned_cols=95  Identities=16%  Similarity=0.171  Sum_probs=57.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| .|.+|+.++..|+..+.       +|.++|+++  ++++.    +......   ......+..++++++|+|
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~-------~V~~~dr~~--~~~~~----l~~~g~~---~~~s~~~~~~~~~~~dvI   63 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGH-------DCVGYDHDQ--DAVKA----MKEDRTT---GVANLRELSQRLSAPRVV   63 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHH----HHHcCCc---ccCCHHHHHhhcCCCCEE
Confidence            4899999 79999999999988763       789999984  33322    2221100   000011233456789999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      +++.  |   .           ..++++++.+.....++.+||..||.
T Consensus        64 i~~v--p---~-----------~~~~~v~~~l~~~l~~g~ivid~st~   95 (298)
T TIGR00872        64 WVMV--P---H-----------GIVDAVLEELAPTLEKGDIVIDGGNS   95 (298)
T ss_pred             EEEc--C---c-----------hHHHHHHHHHHhhCCCCCEEEECCCC
Confidence            9983  1   1           12334444555554456667777764

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=97.26  E-value=0.001  Score=61.47  Aligned_cols=167  Identities=15%  Similarity=0.085  Sum_probs=89.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-CCccceEeeCChhhhcC--CC
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEACT--GV   82 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~~~~~~~~~~~~~~al~--~a   82 (332)
                      ||.|+||+|++|+.++..|+..+.       ++.++|.... .... ....+.... . ....++.......++++  +.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~-------~V~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGH-------EVVVLDNLSN-GSPE-ALKRGERITRVTFVEGDLRDRELLDRLFEEHKI   71 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCC-------eEEEEeCCCc-cchh-hhhhhccccceEEEECCCCCHHHHHHHHHhCCC
Confidence            689999999999999999988753       6778875421 1111 001111100 0 00001111112233443  68


Q ss_pred             cEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH------HHHhCCCCCCCcEE
Q 020022           83 NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI------LKEFAPSIPAKNIT  154 (332)
Q Consensus        83 DiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~------~~~~~~~~~~~~i~  154 (332)
                      |+||+++|.....  .....+.+..|+.....+++.+.+...  ..++++|. ..  .+.      ..+- ....+...+
T Consensus        72 d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~ss-~~--~~g~~~~~~~~e~-~~~~~~~~y  145 (328)
T TIGR01179        72 DAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGV--KKFIFSSS-AA--VYGEPSSIPISED-SPLGPINPY  145 (328)
T ss_pred             cEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCC--CEEEEecc-hh--hcCCCCCCCcccc-CCCCCCCch
Confidence            9999999865322  123345677899999999998887652  24555543 11  010      0000 001112234


Q ss_pred             EechHHHHHHHHHHHHH-cCCCCCCeeeeEEEecc
Q 020022          155 CLTRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       155 ~~t~lds~r~~~~la~~-l~v~~~~v~~~~v~G~h  188 (332)
                      +.+.....++...+++. .+++..-++...++|.+
T Consensus       146 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~  180 (328)
T TIGR01179       146 GRSKLMSERILRDLSKADPGLSYVILRYFNVAGAD  180 (328)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCC
Confidence            55555555655556655 56666666655556653

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0029  Score=56.69  Aligned_cols=157  Identities=17%  Similarity=0.192  Sum_probs=81.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCCh-----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA-----   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~-----   75 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|.+.+++.  +.++....++......   ...++....+.     
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   78 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-------QVAIAARHL--DALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLD   78 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            446899999999999999999998764       789999874  3343333333221100   00011000111     


Q ss_pred             --hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           76 --VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        76 --~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                        .+.+...|++|+.+|.....   ..+.   ...+..|+..    .+.+.+.+.+.. ....+++++.-..       .
T Consensus        79 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~-------~  150 (253)
T PRK05867         79 QVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQG-QGGVIINTASMSG-------H  150 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcC-CCcEEEEECcHHh-------c
Confidence              12234789999999875321   1222   2334556544    334444444432 2245555543111       1


Q ss_pred             hCCCCCCC-cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAK-NITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~-~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      . ...|.. -.++.++.--..+-+.+++.+.  +..|+
T Consensus       151 ~-~~~~~~~~~Y~asKaal~~~~~~la~e~~--~~gI~  185 (253)
T PRK05867        151 I-INVPQQVSHYCASKAAVIHLTKAMAVELA--PHKIR  185 (253)
T ss_pred             C-CCCCCCccchHHHHHHHHHHHHHHHHHHh--HhCeE
Confidence            0 111211 1344555555566667776654  34555

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=97.25  E-value=0.0018  Score=59.17  Aligned_cols=64  Identities=14%  Similarity=0.260  Sum_probs=47.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh-hhcCCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD-AAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~-~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      +||++|| .|.||+.++..|+..|.       +++.||+++  ++.   ...+.. ..       .......++.++||+
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~-------~v~v~~r~~--~ka---~~~~~~~Ga-------~~a~s~~eaa~~aDv   60 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGH-------EVTVYNRTP--EKA---AELLAAAGA-------TVAASPAEAAAEADV   60 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCC-------EEEEEeCCh--hhh---hHHHHHcCC-------cccCCHHHHHHhCCE
Confidence            4899999 89999999999999874       899999985  332   122222 22       123456789999999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||..-
T Consensus        61 Vitmv   65 (286)
T COG2084          61 VITML   65 (286)
T ss_pred             EEEec
Confidence            99984

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0034  Score=56.14  Aligned_cols=119  Identities=21%  Similarity=0.208  Sum_probs=63.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChh------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAV------   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~------   76 (332)
                      ..++|.|+||+|.+|++++..|++.|.       ++.+.++++.  . .....++..... ....++.-..+..      
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-------~Vi~~~r~~~--~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-------RVALLDRSED--V-AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAV   83 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCHH--H-HHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence            346899999999999999999998763       7889988742  1 111112211000 0000110001111      


Q ss_pred             -hhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecC
Q 020022           77 -EACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVAN  132 (332)
Q Consensus        77 -~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tN  132 (332)
                       +.+...|+||+.+|......   .+.   ...+..|+.....+.+.+..+.  .+..+++++|.
T Consensus        84 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  148 (255)
T PRK06841         84 ISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS  148 (255)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence             12346799999998753211   122   2345666665555555544321  01346666664

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.0095  Score=53.19  Aligned_cols=37  Identities=24%  Similarity=0.177  Sum_probs=31.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .+.++|.|+||+|++|.+++..|+..|.       .+.++|++.
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~-------~Vi~~~r~~   42 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGA-------HVIVSSRKL   42 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            3457899999999999999999998763       689999874

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.0014  Score=58.88  Aligned_cols=119  Identities=16%  Similarity=0.113  Sum_probs=62.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe----eCChhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA----TTDAVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~----~~~~~~a-   78 (332)
                      +.+++.|+||+|++|.+++..|+..|.       .+++.+... .+.+......+.+.. ....-+..    ..+..++ 
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~   78 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGF-------DVAVHYNRS-RDEAEALAAEIRALG-RRAVALQADLADEAEVRALV   78 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHH
Confidence            356899999999999999999988763       566666532 222222222221111 00000111    0111122 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcC--CCeEEEEec
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVA  131 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~--~~~~viv~t  131 (332)
                            +...|+||+.||.....   ..+   ....+..|+.-...+.+.+..+..  ....+++++
T Consensus        79 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~  145 (258)
T PRK09134         79 ARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMI  145 (258)
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence                  23479999999874321   122   234566777655555555444321  124455543

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=97.23  E-value=0.002  Score=59.62  Aligned_cols=64  Identities=22%  Similarity=0.453  Sum_probs=46.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+||| .|.+|..++..|+..|.       +|..||+++  ++++    .+...      ......+..+++++||+|
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~-------~V~v~d~~~--~~~~----~~~~~------g~~~~~s~~~~~~~aDvV   61 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGH-------QLQVFDVNP--QAVD----ALVDK------GATPAASPAQAAAGAEFV   61 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHc------CCcccCCHHHHHhcCCEE
Confidence            4899999 79999999999998763       799999874  3332    22221      112334567888999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        62 i~~v   65 (296)
T PRK15461         62 ITML   65 (296)
T ss_pred             EEec
Confidence            9984

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=97.23  E-value=0.004  Score=57.92  Aligned_cols=120  Identities=13%  Similarity=0.194  Sum_probs=66.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH----HhhhhcCCccceEeeCChhhhcC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME----LVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d----l~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      .|||+|+| +|.||+.++..|...|.       ++.|+++..  +.++....+    +.+....  ..+.......+...
T Consensus         2 ~m~I~IiG-aGaiG~~~a~~L~~~G~-------~V~lv~r~~--~~~~~i~~~~Gl~i~~~g~~--~~~~~~~~~~~~~~   69 (305)
T PRK05708          2 SMTWHILG-AGSLGSLWACRLARAGL-------PVRLILRDR--QRLAAYQQAGGLTLVEQGQA--SLYAIPAETADAAE   69 (305)
T ss_pred             CceEEEEC-CCHHHHHHHHHHHhCCC-------CeEEEEech--HHHHHHhhcCCeEEeeCCcc--eeeccCCCCccccc
Confidence            46899999 69999999999998763       689999863  222211110    1000000  01111111123346


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEe
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL  156 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  156 (332)
                      ..|+||++.-..            .    ..+..+.+..+..++..++.+-|=++....+.. +   ++.+++.++
T Consensus        70 ~~D~viv~vK~~------------~----~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l~~-~---~~~~~v~~g  125 (305)
T PRK05708         70 PIHRLLLACKAY------------D----AEPAVASLAHRLAPGAELLLLQNGLGSQDAVAA-R---VPHARCIFA  125 (305)
T ss_pred             ccCEEEEECCHH------------h----HHHHHHHHHhhCCCCCEEEEEeCCCCCHHHHHH-h---CCCCcEEEE
Confidence            789999984211            1    223444555554467777788887765444433 2   354555444

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.23  E-value=0.0024  Score=56.81  Aligned_cols=117  Identities=17%  Similarity=0.169  Sum_probs=64.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA---   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a---   78 (332)
                      .++|.|+||+|++|++++..|+..|.       ++.++|++.  +.......++.......   ..++.......++   
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   73 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGA-------KVAVFDLNR--EAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAA   73 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            46899999999999999999998764       789999874  33332223332211000   0011000011122   


Q ss_pred             ----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecC
Q 020022           79 ----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVAN  132 (332)
Q Consensus        79 ----l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tN  132 (332)
                          +...|+||+.+|.....   ..+.   ...+..|+.....+.+.+.    +..  ...+++++.
T Consensus        74 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~iss  139 (250)
T TIGR03206        74 AEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG--AGRIVNIAS  139 (250)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEECc
Confidence                23589999999864221   1222   2335667665555544443    332  245666664

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.018  Score=51.63  Aligned_cols=39  Identities=23%  Similarity=0.255  Sum_probs=32.0

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCC
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPP   46 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~   46 (332)
                      |+. +.++|.|+||+|.+|+.++..|+..|.       + |.++++++
T Consensus         1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~-------~~V~~~~r~~   41 (260)
T PRK06198          1 MGRLDGKVALVTGGTQGLGAAIARAFAERGA-------AGLVICGRNA   41 (260)
T ss_pred             CCCCCCcEEEEeCCCchHHHHHHHHHHHCCC-------CeEEEEcCCH
Confidence            544 457899999999999999999998763       4 88999864

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.22  E-value=0.0039  Score=49.92  Aligned_cols=73  Identities=22%  Similarity=0.209  Sum_probs=46.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |||+|+|++|.||+.++..+....-      .+ +..+|.+++ + ..  ..|+.+........+.++.++.+.++.+|+
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~------~~lv~~v~~~~~-~-~~--g~d~g~~~~~~~~~~~v~~~l~~~~~~~DV   70 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPG------FELVGAVDRKPS-A-KV--GKDVGELAGIGPLGVPVTDDLEELLEEADV   70 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTT------EEEEEEEETTTS-T-TT--TSBCHHHCTSST-SSBEBS-HHHHTTH-SE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCC------cEEEEEEecCCc-c-cc--cchhhhhhCcCCcccccchhHHHhcccCCE
Confidence            5899999779999999999988431      14 456666531 1 21  234433322223455566788899999999


Q ss_pred             EEEe
Q 020022           85 AVMV   88 (332)
Q Consensus        85 Vi~~   88 (332)
                      ||-.
T Consensus        71 vIDf   74 (124)
T PF01113_consen   71 VIDF   74 (124)
T ss_dssp             EEEE
T ss_pred             EEEc
Confidence            9887

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK08589 short chain dehydrogenase; Validated

Probab=97.22  E-value=0.003  Score=57.42  Aligned_cols=156  Identities=13%  Similarity=0.098  Sum_probs=82.3

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeC--Chh
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATT--DAV   76 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~--~~~   76 (332)
                      |+. +.+++.|+||+|.+|.+++..|+..|.       ++.++++++   .+.....++.+..... ......+.  +..
T Consensus         1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~-------~vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   70 (272)
T PRK08589          1 MKRLENKVAVITGASTGIGQASAIALAQEGA-------YVLAVDIAE---AVSETVDKIKSNGGKAKAYHVDISDEQQVK   70 (272)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCcH---HHHHHHHHHHhcCCeEEEEEeecCCHHHHH
Confidence            553 356899999999999999999998764       788998872   2332333333211000 00111110  111


Q ss_pred             -------hhcCCCcEEEEeCCCCCCCC----CCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           77 -------EACTGVNIAVMVGGFPRKEG----MER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        77 -------~al~~aDiVi~~ag~~~~~~----~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                             +.+...|++|+.||.....+    .+.   ...+..|+.    +.+.+.+.+.+.   ++.+|+++.....  
T Consensus        71 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~--  145 (272)
T PRK08589         71 DFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ---GGSIINTSSFSGQ--  145 (272)
T ss_pred             HHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCEEEEeCchhhc--
Confidence                   12345799999999753221    122   223344543    445555555433   2567777653321  


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                             .+.+..-.++.++.--..+.+.+++.++  +..|+
T Consensus       146 -------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~  178 (272)
T PRK08589        146 -------AADLYRSGYNAAKGAVINFTKSIAIEYG--RDGIR  178 (272)
T ss_pred             -------CCCCCCchHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence                   1112111344444444566777777664  34565

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=97.21  E-value=0.0022  Score=60.35  Aligned_cols=90  Identities=17%  Similarity=0.207  Sum_probs=57.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| .|.+|+.++..|...|.       +|..||+.+.  ..    .+.   .       ....+..+++++||+
T Consensus       146 g~~VgIIG-~G~IG~~vA~~L~~~G~-------~V~~~d~~~~--~~----~~~---~-------~~~~~l~ell~~aDi  201 (330)
T PRK12480        146 NMTVAIIG-TGRIGAATAKIYAGFGA-------TITAYDAYPN--KD----LDF---L-------TYKDSVKEAIKDADI  201 (330)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEeCChh--Hh----hhh---h-------hccCCHHHHHhcCCE
Confidence            36999999 79999999999987653       7999998741  11    111   0       122467889999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |++..-...           .+...+   .+.+-...++++++|+++-
T Consensus       202 Vil~lP~t~-----------~t~~li---~~~~l~~mk~gavlIN~aR  235 (330)
T PRK12480        202 ISLHVPANK-----------ESYHLF---DKAMFDHVKKGAILVNAAR  235 (330)
T ss_pred             EEEeCCCcH-----------HHHHHH---hHHHHhcCCCCcEEEEcCC
Confidence            999853221           111111   2223333457788888874

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=97.21  E-value=0.0016  Score=59.64  Aligned_cols=94  Identities=10%  Similarity=0.128  Sum_probs=56.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh---hhHHHHhhhhcCCccceEeeCChhhhc----
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN---GVKMELVDAAFPLLKGVVATTDAVEAC----   79 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~---~~~~dl~~~~~~~~~~~~~~~~~~~al----   79 (332)
                      ||.|+||+|++|++++..|+..|.       +++...+++......   ....|+.|           ...+.+++    
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~-------~V~~~~R~~~~~~~~~~~~~~~d~~d-----------~~~l~~a~~~~~   62 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASV-------PFLVASRSSSSSAGPNEKHVKFDWLD-----------EDTWDNPFSSDD   62 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCC-------cEEEEeCCCccccCCCCccccccCCC-----------HHHHHHHHhccc
Confidence            589999999999999999988763       688888875211100   01112221           12344555    


Q ss_pred             --CC-CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           80 --TG-VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        80 --~~-aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                        ++ +|.|++.++...    ..       .+..+.+++..++.+.+  +|+..|
T Consensus        63 ~~~g~~d~v~~~~~~~~----~~-------~~~~~~~i~aa~~~gv~--~~V~~S  104 (285)
T TIGR03649        63 GMEPEISAVYLVAPPIP----DL-------APPMIKFIDFARSKGVR--RFVLLS  104 (285)
T ss_pred             CcCCceeEEEEeCCCCC----Ch-------hHHHHHHHHHHHHcCCC--EEEEee
Confidence              67 999998865321    11       13345666777666532  455555

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.004  Score=55.74  Aligned_cols=116  Identities=16%  Similarity=0.200  Sum_probs=62.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEee--CChhhhcC-C
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVAT--TDAVEACT-G   81 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~--~~~~~al~-~   81 (332)
                      ++|.|+||+|.+|++++..|+..|.       ++++.++++  +.+.....+........ ......+  .....++. +
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGH-------NVIAGVQIA--PQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWD   73 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCC
Confidence            4799999999999999999998763       677887763  22221111111110000 0001111  12233444 7


Q ss_pred             CcEEEEeCCCCCCC---CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022           82 VNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        82 aDiVi~~ag~~~~~---~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      .|+||+.+|.....   ..+.+   ..+..|+.    ..+.+.+.+.+.. . ..+|++|.
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-~~iv~~SS  132 (257)
T PRK09291         74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-K-GKVVFTSS  132 (257)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-ceEEEEcC
Confidence            99999999975421   11222   23344544    3344445554443 2 46777764

>PRK09242 tropinone reductase; Provisional

Probab=97.20  E-value=0.003  Score=56.66  Aligned_cols=153  Identities=16%  Similarity=0.180  Sum_probs=81.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeCC--------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATTD--------   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~~--------   74 (332)
                      ..+++.|+||+|.+|..++..|+..|.       +|.+.+++.  +.++....++.... +. .++. ...|        
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~~~   76 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-------DVLIVARDA--DALAQARDELAEEF-PE-REVHGLAADVSDDEDRR   76 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhC-CC-CeEEEEECCCCCHHHHH
Confidence            346899999999999999999998764       789999874  34443333343221 00 0111 0111        


Q ss_pred             -----hhhhcCCCcEEEEeCCCCCC-C--CCCHH---HHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcccchHH
Q 020022           75 -----AVEACTGVNIAVMVGGFPRK-E--GMERK---DVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        75 -----~~~al~~aDiVi~~ag~~~~-~--~~~r~---~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                           ..+.+...|+||+++|.... +  ..+.+   ..+..|+.-...+    .+.+++..  ...++++|.-...   
T Consensus        77 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~~sS~~~~---  151 (257)
T PRK09242         77 AILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA--SSAIVNIGSVSGL---  151 (257)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CceEEEECccccC---
Confidence                 12234568999999987421 1  12222   3345565544444    44444432  3456666643221   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                            .+.+..-.++.+..-...+-..++..+.  +..++
T Consensus       152 ------~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~  184 (257)
T PRK09242        152 ------THVRSGAPYGMTKAALLQMTRNLAVEWA--EDGIR  184 (257)
T ss_pred             ------CCCCCCcchHHHHHHHHHHHHHHHHHHH--HhCeE
Confidence                  1112222345555555566666665543  33454

>PRK07578 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0059  Score=52.60  Aligned_cols=105  Identities=17%  Similarity=0.173  Sum_probs=59.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |++.|+||+|.+|.+++..|+.. .       ++.+.++++  +.   ...|+.+....        ....+.+...|++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~-------~vi~~~r~~--~~---~~~D~~~~~~~--------~~~~~~~~~id~l   59 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-H-------EVITAGRSS--GD---VQVDITDPASI--------RALFEKVGKVDAV   59 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-C-------cEEEEecCC--Cc---eEecCCChHHH--------HHHHHhcCCCCEE
Confidence            47999999999999999999875 2       688888763  11   12344332100        0011223468999


Q ss_pred             EEeCCCCCCC---CCCHHH---HHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           86 VMVGGFPRKE---GMERKD---VMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        86 i~~ag~~~~~---~~~r~~---~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      |+.+|.....   +.+.++   .+..|+.....+.+....+-.+...++++|
T Consensus        60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is  111 (199)
T PRK07578         60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS  111 (199)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence            9999974311   123332   344555544444444433322234555655

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.018  Score=50.98  Aligned_cols=154  Identities=16%  Similarity=0.114  Sum_probs=80.0

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeC----
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATT----   73 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~----   73 (332)
                      |.. +.++|.|+||+|++|.+++..|+..|.       .|+++++++  +.++....++........  .......    
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~   71 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGA-------TVILVARHQ--KKLEKVYDAIVEAGHPEPFAIRFDLMSAEEK   71 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCCh--HHHHHHHHHHHHcCCCCcceEEeeecccchH
Confidence            544 347899999999999999999998763       789999875  333333233321110000  0111110    


Q ss_pred             C-------hhhhc-CCCcEEEEeCCCCC--CC--CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           74 D-------AVEAC-TGVNIAVMVGGFPR--KE--GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        74 ~-------~~~al-~~aDiVi~~ag~~~--~~--~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      +       ..+.+ ...|+||+.||...  .+  ..+.+   ..+..|+.    +.+.+.+.+.+..  .+.+++++...
T Consensus        72 ~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--~~~iv~~ss~~  149 (239)
T PRK08703         72 EFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP--DASVIFVGESH  149 (239)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC--CCEEEEEeccc
Confidence            1       11112 46799999999642  11  12222   23455664    3445555554443  24566655422


Q ss_pred             cchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCC
Q 020022          135 NTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNV  174 (332)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v  174 (332)
                      ..         .+.+....++.++.-...+-+.++..++-
T Consensus       150 ~~---------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~  180 (239)
T PRK08703        150 GE---------TPKAYWGGFGASKAALNYLCKVAADEWER  180 (239)
T ss_pred             cc---------cCCCCccchHHhHHHHHHHHHHHHHHhcc
Confidence            11         01111112444555445666666776653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.19  E-value=0.0044  Score=55.14  Aligned_cols=39  Identities=23%  Similarity=0.374  Sum_probs=32.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |..+.+++.|+||+|.+|+.++..|+..|.       ++.++|+++
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~-------~vi~~~r~~   39 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGA-------KLALIDLNQ   39 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            655567999999999999999999988763       688899874

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.0052  Score=57.81  Aligned_cols=150  Identities=15%  Similarity=0.096  Sum_probs=79.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEee--CChhhh--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVAT--TDAVEA--   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~--~~~~~a--   78 (332)
                      ..++|.|+||+|.+|.+++..|+..|.       +|+++++++  +.++....++....... .....++  .+..++  
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-------~Vvl~~R~~--~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~   76 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-------RLVLAARDE--EALQAVAEECRALGAEVLVVPTDVTDADQVKALAT   76 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence            457899999999999999999998874       789999874  44543333333211000 0011111  111111  


Q ss_pred             -----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        79 -----l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                           +...|++|+.||+....   ..+.   ...+..|.-    ..+.+.+.+.+..  .+.+|+++.-...       
T Consensus        77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~--~g~iV~isS~~~~-------  147 (330)
T PRK06139         77 QAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG--HGIFINMISLGGF-------  147 (330)
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC--CCEEEEEcChhhc-------
Confidence                 24679999999975321   1222   234555554    3344555555543  2456666542211       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                        .+.|..-.++.++.-...|-..++..+.
T Consensus       148 --~~~p~~~~Y~asKaal~~~~~sL~~El~  175 (330)
T PRK06139        148 --AAQPYAAAYSASKFGLRGFSEALRGELA  175 (330)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHHhC
Confidence              1122212344444444455556666554

>KOG2711 consensus Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase [Energy production and conversion]

Probab=97.18  E-value=0.0089  Score=55.29  Aligned_cols=109  Identities=23%  Similarity=0.322  Sum_probs=67.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhh---HHHH---hhhhc------CCccceE
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV---KMEL---VDAAF------PLLKGVV   70 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~---~~dl---~~~~~------~~~~~~~   70 (332)
                      +.+.||+|+| +|+=|++++..+...-.-.+....+|+..-..+   ...+.   ..|.   .|...      .++.++.
T Consensus        19 ~~~~kV~ivG-sGnWGsaiaki~~~n~~~~~~f~~~Vrmwv~ee---~i~~~~~~L~eiIN~~heN~KYlpg~~lP~Nvv   94 (372)
T KOG2711|consen   19 RDPLKVCIVG-SGNWGSAIAKIVGENVKEFPIFDPQVRMWVFEE---EINGEAEKLTEIINSRHENVKYLPGIKLPENVV   94 (372)
T ss_pred             cCceEEEEEc-cChHHHHHHHHHhhhhhhccccCceeeEEEecc---ccCChhHHHHHHhccccccccccCCccCCCCeE
Confidence            4568999999 799999999887653211111112455554432   23331   1111   11111      1346788


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      ..+|+.++++|||++|+..  |   -           +.+.+++++|..+-+|++..|-.+
T Consensus        95 Av~dl~ea~~dADilvf~v--P---h-----------Qf~~~ic~~l~g~vk~~~~aISL~  139 (372)
T KOG2711|consen   95 AVPDLVEAAKDADILVFVV--P---H-----------QFIPRICEQLKGYVKPGATAISLI  139 (372)
T ss_pred             ecchHHHHhccCCEEEEeC--C---h-----------hhHHHHHHHHhcccCCCCeEEEee
Confidence            8899999999999999983  2   1           345578888888877776554443

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.0056  Score=55.07  Aligned_cols=118  Identities=24%  Similarity=0.198  Sum_probs=64.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh---
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA---   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a---   78 (332)
                      ++|.|+||+|++|+.++..|+..|.       ++.++++++  +..+....++.... ....-+... ++   ..++   
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~   71 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA-------QLVLAARNE--TRLASLAQELADHG-GEALVVPTDVSDAEACERLIEA   71 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHH
Confidence            4799999999999999999988763       788999874  33332222332211 000001110 11   1111   


Q ss_pred             ----cCCCcEEEEeCCCCCCCC---C-CH---HHHHHhhHHHHHHHHHHHHhhcC-CCeEEEEecCc
Q 020022           79 ----CTGVNIAVMVGGFPRKEG---M-ER---KDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANP  133 (332)
Q Consensus        79 ----l~~aDiVi~~ag~~~~~~---~-~r---~~~~~~n~~i~~~i~~~i~~~~~-~~~~viv~tNP  133 (332)
                          +.+.|+||+++|......   . +.   .+.+..|+.....+.+.+..+.. ....++++|..
T Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~  138 (263)
T PRK06181         72 AVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSL  138 (263)
T ss_pred             HHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence                236799999998753221   1 22   23356677666666555543211 12456666653

>PLN02996 fatty acyl-CoA reductase

Probab=97.16  E-value=0.0069  Score=60.13  Aligned_cols=111  Identities=20%  Similarity=0.148  Sum_probs=65.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcc-cCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhh-c-------C--C----cc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALN-GVKMELVDAA-F-------P--L----LK   67 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~-~-------~--~----~~   67 (332)
                      +.++|.||||+||+|++++..|+..+ -.+     +|.++.+....+... ....++.+.. +       +  .    ..
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~-----~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~   84 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVK-----KLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISE   84 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCC-----EEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhc
Confidence            34689999999999999999988642 111     566666543211111 0000111000 0       0  0    01


Q ss_pred             ceEe-eCC-------------hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Q 020022           68 GVVA-TTD-------------AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH  120 (332)
Q Consensus        68 ~~~~-~~~-------------~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~  120 (332)
                      ++.. ..|             ..+.++++|+|||+|+... ...+..+....|+...+++.+...+.
T Consensus        85 kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~  150 (491)
T PLN02996         85 KVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKC  150 (491)
T ss_pred             CEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            2211 111             2345678999999998654 23455667788999999999988775

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=97.13  E-value=0.0038  Score=55.01  Aligned_cols=118  Identities=19%  Similarity=0.198  Sum_probs=65.3

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhhc-----
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEAC-----   79 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~al-----   79 (332)
                      |.|+|++|++|+.++..|+..|.       ++.+.+++. .+.+.....++.+.....   ..++.......+++     
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGA-------KVIITYRSS-EEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEE   72 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCc-hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            46999999999999999998763       688888764 122322223332211000   00111111112222     


Q ss_pred             --CCCcEEEEeCCCCCCC---CC---CHHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCc
Q 020022           80 --TGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANP  133 (332)
Q Consensus        80 --~~aDiVi~~ag~~~~~---~~---~r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP  133 (332)
                        ...|+||+.+|.....   +.   .....+..|......+.+.+.++.  .+...++++|..
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~  136 (239)
T TIGR01830        73 ELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV  136 (239)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence              3469999999875321   11   223456677777666766665542  123456666654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07074 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.0062  Score=54.57  Aligned_cols=147  Identities=20%  Similarity=0.145  Sum_probs=74.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhc-----
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEAC-----   79 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al-----   79 (332)
                      +++.|+||+|++|..++..|+..|.       ++.+++++.  +.++....++..... .....+.-..+...++     
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGD-------RVLALDIDA--AALAAFADALGDARFVPVACDLTDAASLAAALANAAA   73 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4799999999999999999998763       789999874  333222222211000 0000000001111222     


Q ss_pred             --CCCcEEEEeCCCCCCCC---CCHHH---HHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           80 --TGVNIAVMVGGFPRKEG---MERKD---VMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        80 --~~aDiVi~~ag~~~~~~---~~r~~---~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                        .+.|+||+.+|......   .+.++   .+..|......+.+.+    .+..  ...++++|.....      .. .+
T Consensus        74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~------~~-~~  144 (257)
T PRK07074         74 ERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS--RGAVVNIGSVNGM------AA-LG  144 (257)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEEcchhhc------CC-CC
Confidence              35799999998753221   22222   2345555444444443    3322  3456666652211      00 11


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .   ..++.+..-..++.+.+++.++
T Consensus       145 ~---~~y~~sK~a~~~~~~~~a~~~~  167 (257)
T PRK07074        145 H---PAYSAAKAGLIHYTKLLAVEYG  167 (257)
T ss_pred             C---cccHHHHHHHHHHHHHHHHHHh
Confidence            1   1345555555566677777665

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=97.12  E-value=0.0066  Score=53.62  Aligned_cols=154  Identities=14%  Similarity=0.162  Sum_probs=76.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhh----hhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA----LNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~----l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      |+|.|+||+|.+|++++..|+..+. +    ..+.+.+++...+.    +.-...|+.+...       . ....+.+..
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~-~----~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~~-------~-~~~~~~~~~   67 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYP-D----ATVHATYRHHKPDFQHDNVQWHALDVTDEAE-------I-KQLSEQFTQ   67 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCC-C----CEEEEEccCCccccccCceEEEEecCCCHHH-------H-HHHHHhcCC
Confidence            4899999999999999999988642 1    14666665431110    0001122221110       0 012344678


Q ss_pred             CcEEEEeCCCCCCC---------CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           82 VNIAVMVGGFPRKE---------GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        82 aDiVi~~ag~~~~~---------~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                      .|++|+++|.....         +.+.+   ..+..|+    .+.+.+.+.+++..  ...++++|-......    .  
T Consensus        68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~--~~~i~~iss~~~~~~----~--  139 (235)
T PRK09009         68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE--SAKFAVISAKVGSIS----D--  139 (235)
T ss_pred             CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC--CceEEEEeecccccc----c--
Confidence            99999999975321         11222   2233443    44555555554432  245666653222110    0  


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..++....++.++.--..+-+.++..+.-...+++
T Consensus       140 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~  174 (235)
T PRK09009        140 NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGV  174 (235)
T ss_pred             CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeE
Confidence            01121123444555445666667766553223454

>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.11  E-value=0.0087  Score=56.58  Aligned_cols=115  Identities=19%  Similarity=0.219  Sum_probs=68.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH--------HHHhhhh--cCCccceEeeCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK--------MELVDAA--FPLLKGVVATTD   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~--------~dl~~~~--~~~~~~~~~~~~   74 (332)
                      .++|+|+| .|+||..+|-.++..|.       .+.-+|+++  .+.....        -++...-  .-...+++.+++
T Consensus         9 ~~~I~ViG-LGYVGLPlA~~fA~~G~-------~ViG~DIn~--~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lraTtd   78 (436)
T COG0677           9 SATIGVIG-LGYVGLPLAAAFASAGF-------KVIGVDINQ--KKVDKLNRGESYIEEPDLDEVVKEAVESGKLRATTD   78 (436)
T ss_pred             ceEEEEEc-cccccHHHHHHHHHcCC-------ceEeEeCCH--HHHHHHhCCcceeecCcHHHHHHHHHhcCCceEecC
Confidence            47999999 99999999999998874       689999985  2222110        0111000  001245777776


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEE-ecCcccc
Q 020022           75 AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLV-VANPANT  136 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv-~tNP~~~  136 (332)
                      . +.++.||++|++.-.|.+...+      -.+..+.+-++.|.++-.++..||+ .|-|...
T Consensus        79 ~-~~l~~~dv~iI~VPTPl~~~~~------pDls~v~~aa~sIa~~L~kG~LVIlEST~~PGT  134 (436)
T COG0677          79 P-EELKECDVFIICVPTPLKKYRE------PDLSYVESAARSIAPVLKKGDLVILESTTPPGT  134 (436)
T ss_pred             h-hhcccCCEEEEEecCCcCCCCC------CChHHHHHHHHHHHHhcCCCCEEEEecCCCCCc
Confidence            5 4478999999998776544221      1223344444555555444444433 4566654

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0033  Score=56.92  Aligned_cols=115  Identities=20%  Similarity=0.159  Sum_probs=64.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh----
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE----   77 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~----   77 (332)
                      ++|.|+||+|.+|+.++..|+..|.       ++.+.+++.  +.++....++...... ..-+... ++   ..+    
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~D~~~~~~~~~~~~~   70 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW-------RLALADVNE--EGGEETLKLLREAGGD-GFYQRCDVRDYSQLTALAQA   70 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-eEEEEccCCCHHHHHHHHHH
Confidence            4799999999999999999998764       688998874  3333333333221100 0001110 11   111    


Q ss_pred             ---hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022           78 ---ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        78 ---al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                         .+...|+||+.+|.....   ..+.   +..+..|..    ..+.+.+.+++.. . ..++++|.
T Consensus        71 i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-~~iv~vsS  136 (270)
T PRK05650         71 CEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-S-GRIVNIAS  136 (270)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-C-CEEEEECC
Confidence               224689999999975321   1222   234556643    4445555555543 2 45666664

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=97.11  E-value=0.0034  Score=58.17  Aligned_cols=64  Identities=14%  Similarity=0.155  Sum_probs=43.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC---C
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG---V   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~---a   82 (332)
                      |||+||| .|.+|+.++..|+..+.       +|..+|+++  ++++    .+.+.      ......+..+.+++   +
T Consensus         1 m~Ig~IG-lG~mG~~mA~~L~~~g~-------~v~v~dr~~--~~~~----~~~~~------g~~~~~s~~~~~~~~~~a   60 (299)
T PRK12490          1 MKLGLIG-LGKMGGNMAERLREDGH-------EVVGYDVNQ--EAVD----VAGKL------GITARHSLEELVSKLEAP   60 (299)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHhCCC-------EEEEEECCH--HHHH----HHHHC------CCeecCCHHHHHHhCCCC
Confidence            4899999 79999999999988763       788999874  3322    12221      12233455565554   6


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+||++.
T Consensus        61 dvVi~~v   67 (299)
T PRK12490         61 RTIWVMV   67 (299)
T ss_pred             CEEEEEe
Confidence            8998873

>PRK09186 flagellin modification protein A; Provisional

Probab=97.11  E-value=0.0031  Score=56.39  Aligned_cols=163  Identities=17%  Similarity=0.124  Sum_probs=81.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcC---C-ccceEeeCChhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP---L-LKGVVATTDAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~---~-~~~~~~~~~~~~a   78 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       ++++.++++  +.++....++... ...   . ..++.-..+..++
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~   73 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-------IVIAADIDK--EALNELLESLGKEFKSKKLSLVELDITDQESLEEF   73 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecCh--HHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHH
Confidence            356899999999999999999998763       688888764  3333233333211 000   0 0011111112222


Q ss_pred             cC-------CCcEEEEeCCCCCC------CCCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           79 CT-------GVNIAVMVGGFPRK------EGMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        79 l~-------~aDiVi~~ag~~~~------~~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                      ++       ..|+||+.||....      .+.+..   ..+..|+    ...+.+.+.+.+..  ..++|++|.-.....
T Consensus        74 ~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~  151 (256)
T PRK09186         74 LSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG--GGNLVNISSIYGVVA  151 (256)
T ss_pred             HHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC--CceEEEEechhhhcc
Confidence            32       37999999875321      112222   2234444    45556666665543  246666653111100


Q ss_pred             HHHHHhCCCCCCC--cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          139 LILKEFAPSIPAK--NITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       139 ~~~~~~~~~~~~~--~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .-...+ .+.+..  ..++.+......+.+.+++.+.  +..++
T Consensus       152 ~~~~~~-~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~i~  192 (256)
T PRK09186        152 PKFEIY-EGTSMTSPVEYAAIKAGIIHLTKYLAKYFK--DSNIR  192 (256)
T ss_pred             ccchhc-cccccCCcchhHHHHHHHHHHHHHHHHHhC--cCCeE
Confidence            000000 111111  1355556555566666777653  34555

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=97.11  E-value=0.0026  Score=58.54  Aligned_cols=169  Identities=15%  Similarity=0.113  Sum_probs=91.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC---ChhhhcC-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT---DAVEACT-   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~---~~~~al~-   80 (332)
                      .++|.||||+|++|+|.+..|+..|.       +++.+|.-.+ ..+... .-..+.. .....+.+..   .+.++|+ 
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy-------~v~~vDNl~n-~~~~sl-~r~~~l~-~~~~~v~f~~~Dl~D~~~L~k   71 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGY-------GVVIVDNLNN-SYLESL-KRVRQLL-GEGKSVFFVEGDLNDAEALEK   71 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCC-------cEEEEecccc-cchhHH-HHHHHhc-CCCCceEEEEeccCCHHHHHH
Confidence            46899999999999999999998874       7899996532 122111 0011111 1112332211   1223332 


Q ss_pred             -----CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc---hHH-HHHHhCCCCC
Q 020022           81 -----GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT---NAL-ILKEFAPSIP  149 (332)
Q Consensus        81 -----~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~---~~~-~~~~~~~~~~  149 (332)
                           .-|-|+|.|+.....  -+.+..+...|+--.-.+.+.++++..+ . ++..| .+.+   .+. -+.+..+-.-
T Consensus        72 vF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~-~-~V~ss-satvYG~p~~ip~te~~~t~~  148 (343)
T KOG1371|consen   72 LFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVK-A-LVFSS-SATVYGLPTKVPITEEDPTDQ  148 (343)
T ss_pred             HHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCc-e-EEEec-ceeeecCcceeeccCcCCCCC
Confidence                 358899988754321  1344567788888888999999988743 2 33333 2211   000 0111111111


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe
Q 020022          150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG  186 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G  186 (332)
                      +-..++-|..........+.+..+.....+|.+.+.|
T Consensus       149 p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~g  185 (343)
T KOG1371|consen  149 PTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIG  185 (343)
T ss_pred             CCCcchhhhHHHHHHHHhhhccccceEEEEEeccccC
Confidence            2234566666555555555555555555555444444

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0029  Score=56.77  Aligned_cols=118  Identities=21%  Similarity=0.260  Sum_probs=64.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chh---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAV---   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~---   76 (332)
                      +.+++.|+||+|.+|++++..|+..|.       ++.+.|+++. +.++....++.+... ....+... +   +..   
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-------~v~~~~r~~~-~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~   77 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-------DVALFDLRTD-DGLAETAEHIEAAGR-RAIQIAADVTSKADLRAAV   77 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCcc-hHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHH
Confidence            456899999999999999999998774       7888888642 222322223332110 00001110 1   111   


Q ss_pred             ----hhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecC
Q 020022           77 ----EACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        77 ----~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tN  132 (332)
                          +.+..-|++|+.+|......   .+.   ...+..|+...    +.+.+.+.+..  ...++++|.
T Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS  145 (254)
T PRK06114         78 ARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG--GGSIVNIAS  145 (254)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC--CcEEEEECc
Confidence                12334699999999753211   122   23455665544    44444444332  245666654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=97.10  E-value=0.03  Score=49.76  Aligned_cols=156  Identities=17%  Similarity=0.094  Sum_probs=76.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee----CChhh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT----TDAVE---   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~----~~~~~---   77 (332)
                      +++|.|+||+|++|+.++..|+..|.       ++.+.+.+. ++.++....++.... ....-+...    .+..+   
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~   72 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGW-------SVGINYARD-AAAAEETADAVRAAG-GRACVVAGDVANEADVIAMFD   72 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcC-CcEEEEEeccCCHHHHHHHHH
Confidence            45899999999999999999998763       566654322 233333323332211 000011111    11111   


Q ss_pred             ----hcCCCcEEEEeCCCCCCC----CCCHH---HHHHhhHHHHH----HHHHHHHhhcC-CCeEEEEecCcccchHHHH
Q 020022           78 ----ACTGVNIAVMVGGFPRKE----GMERK---DVMSKNVSIYK----AQASALEQHAA-PNCKVLVVANPANTNALIL  141 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~----~~~r~---~~~~~n~~i~~----~i~~~i~~~~~-~~~~viv~tNP~~~~~~~~  141 (332)
                          .+...|++|+.+|.....    ..+.+   ..+..|.....    .+.+.+....+ +...+|++|.....     
T Consensus        73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~-----  147 (248)
T PRK06947         73 AVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR-----  147 (248)
T ss_pred             HHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-----
Confidence                134689999999864221    12332   23455654433    33433332210 13456677653321     


Q ss_pred             HHhCCCCCCC-cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAK-NITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~-~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.+.. ..++.+..-...+-..+++.+.  +.+++
T Consensus       148 ----~~~~~~~~~Y~~sK~~~~~~~~~la~~~~--~~~i~  181 (248)
T PRK06947        148 ----LGSPNEYVDYAGSKGAVDTLTLGLAKELG--PHGVR  181 (248)
T ss_pred             ----CCCCCCCcccHhhHHHHHHHHHHHHHHhh--hhCcE
Confidence                011111 1345555554556666666654  33454

>TIGR01746 Thioester-redct thioester reductase domain

Probab=97.10  E-value=0.0079  Score=56.45  Aligned_cols=117  Identities=18%  Similarity=0.121  Sum_probs=68.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhh-hhhHHHHhhhhcC---Cc-cceEe-eCC------
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-NGVKMELVDAAFP---LL-KGVVA-TTD------   74 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l-~~~~~dl~~~~~~---~~-~~~~~-~~~------   74 (332)
                      +|.|+||+|++|++++..|+..+..     .+|+++.++.+.+.. +.....+......   .. .++.. ..|      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~-----~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~   75 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQ-----AKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL   75 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCC-----CEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence            5899999999999999999986521     157777776421111 1111111111000   00 12221 111      


Q ss_pred             ------hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           75 ------AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        75 ------~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                            ..+...++|+||++|+... ...+..++...|+.....+.+...+... . .++++|
T Consensus        76 gl~~~~~~~~~~~~d~vih~a~~~~-~~~~~~~~~~~nv~g~~~ll~~a~~~~~-~-~~v~iS  135 (367)
T TIGR01746        76 GLSDAEWERLAENVDTIVHNGALVN-WVYPYSELRAANVLGTREVLRLAASGRA-K-PLHYVS  135 (367)
T ss_pred             CcCHHHHHHHHhhCCEEEeCCcEec-cCCcHHHHhhhhhHHHHHHHHHHhhCCC-c-eEEEEc
Confidence                  2334578999999998653 2234556677899888888888877653 2 355555

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.10  E-value=0.0028  Score=58.31  Aligned_cols=77  Identities=23%  Similarity=0.250  Sum_probs=53.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+|+| +|.+|.+++..|+..|. .     +|.++|++.  +++++.+.++.+.. +. ..+....+..++++++|+
T Consensus       127 ~k~vlIlG-aGGaaraia~aL~~~G~-~-----~I~I~nR~~--~ka~~la~~l~~~~-~~-~~~~~~~~~~~~~~~aDi  195 (284)
T PRK12549        127 LERVVQLG-AGGAGAAVAHALLTLGV-E-----RLTIFDVDP--ARAAALADELNARF-PA-ARATAGSDLAAALAAADG  195 (284)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHcCC-C-----EEEEECCCH--HHHHHHHHHHHhhC-CC-eEEEeccchHhhhCCCCE
Confidence            36899999 69999999999998774 2     799999984  56666666654422 11 122222344567899999


Q ss_pred             EEEe--CCCC
Q 020022           85 AVMV--GGFP   92 (332)
Q Consensus        85 Vi~~--ag~~   92 (332)
                      ||.+  +|..
T Consensus       196 VInaTp~Gm~  205 (284)
T PRK12549        196 LVHATPTGMA  205 (284)
T ss_pred             EEECCcCCCC
Confidence            9998  5654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.09  E-value=0.0037  Score=57.11  Aligned_cols=157  Identities=15%  Similarity=0.169  Sum_probs=80.7

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCc-hhhhhhhHHHHhhhhcCCccceEeeCC---
Q 020022            1 MAKEPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPA-AEALNGVKMELVDAAFPLLKGVVATTD---   74 (332)
Q Consensus         1 m~~~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~-~~~l~~~~~dl~~~~~~~~~~~~~~~~---   74 (332)
                      |.+..+.+.|+||+  +.+|.+++..|+..|.       .+.+.|+++. .+.++....++... .....++.-...   
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~-------~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~   72 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGA-------ELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKS   72 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHH
Confidence            66667899999976  6899999999998774       6888888631 01111111111100 000000000000   


Q ss_pred             ----hhhhcCCCcEEEEeCCCCCC-----C--CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           75 ----AVEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        75 ----~~~al~~aDiVi~~ag~~~~-----~--~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                          ..+.+...|++|+.||+...     +  ..+.+   ..+..|+..    .+.+.+.+.+    .+.|+++|.-...
T Consensus        73 ~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~----~g~Iv~isS~~~~  148 (274)
T PRK08415         73 LAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND----GASVLTLSYLGGV  148 (274)
T ss_pred             HHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc----CCcEEEEecCCCc
Confidence                11223567999999997431     1  22333   345666544    4444444432    3456666532110


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                               ...|....++.++---..|-+.+|..+.  +..|+
T Consensus       149 ---------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr  181 (274)
T PRK08415        149 ---------KYVPHYNVMGVAKAALESSVRYLAVDLG--KKGIR  181 (274)
T ss_pred             ---------cCCCcchhhhhHHHHHHHHHHHHHHHhh--hcCeE
Confidence                     0112112345555555666777777664  45565

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.015  Score=52.19  Aligned_cols=118  Identities=18%  Similarity=0.172  Sum_probs=66.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEee--CC---hh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVAT--TD---AV   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~--~~---~~   76 (332)
                      ..+++.|+||+|.+|.+++..|+..|.       +|.+.++++  +.++....++........  .....+  .+   ..
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   76 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-------HLHLVARDA--DALEALAADLRAAHGVDVAVHALDLSSPEAREQLA   76 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHH
Confidence            457999999999999999999998764       689999874  334333333322110000  000111  01   11


Q ss_pred             hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022           77 EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +.+...|++|+.+|.....   ..+.   ...+..|+.    ..+.+.+.+.+..  .+.++++|.
T Consensus        77 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~iss  140 (259)
T PRK06125         77 AEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG--SGVIVNVIG  140 (259)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CcEEEEecC
Confidence            2345789999999875321   1222   233455654    4445555555442  245666654

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.09  E-value=0.0059  Score=63.02  Aligned_cols=150  Identities=15%  Similarity=0.131  Sum_probs=79.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-C----CccceEeeCChhhhc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-P----LLKGVVATTDAVEAC   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~----~~~~~~~~~~~~~al   79 (332)
                      .++|.|+||+|++|.+++..|++.|.       +|++.|++.  +.++....++..... .    ...+++-..+..+++
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~Ga-------~Vvi~~r~~--~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~  484 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAEGA-------HVVLADLNL--EAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAF  484 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHH
Confidence            36899999999999999999998764       799999874  333332233321100 0    001111111122222


Q ss_pred             -------CCCcEEEEeCCCCCCC---CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           80 -------TGVNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        80 -------~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                             .+.|+||+.||.....   ..+..   ..+..|+.    ..+...+.+.+... .+.++++|.-...      
T Consensus       485 ~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~-~g~IV~iSS~~a~------  557 (676)
T TIGR02632       485 ADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGL-GGNIVFIASKNAV------  557 (676)
T ss_pred             HHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEeChhhc------
Confidence                   3689999999975321   12222   22333433    34455566655432 3456665532211      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                       +  +.+....++.++.....+.+.++..++
T Consensus       558 -~--~~~~~~aY~aSKaA~~~l~r~lA~el~  585 (676)
T TIGR02632       558 -Y--AGKNASAYSAAKAAEAHLARCLAAEGG  585 (676)
T ss_pred             -C--CCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence             0  112112355566666677777777665

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0031  Score=56.61  Aligned_cols=36  Identities=25%  Similarity=0.279  Sum_probs=31.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +.++|.|+||+|++|.+++..|+..|.       ++.++|++.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-------~v~~~~r~~   41 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-------TVVVGDIDP   41 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH
Confidence            346899999999999999999998763       789999874

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=97.08  E-value=0.0017  Score=53.51  Aligned_cols=116  Identities=16%  Similarity=0.291  Sum_probs=67.8

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc----CC-ccce---EeeCChhhhc
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PL-LKGV---VATTDAVEAC   79 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~----~~-~~~~---~~~~~~~~al   79 (332)
                      |+|+| +|.+|..++..|.+.+.       ++.|+++.+   .++.    +.....    .. ...+   .......+..
T Consensus         1 I~I~G-~GaiG~~~a~~L~~~g~-------~V~l~~r~~---~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   65 (151)
T PF02558_consen    1 ILIIG-AGAIGSLYAARLAQAGH-------DVTLVSRSP---RLEA----IKEQGLTITGPDGDETVQPPIVISAPSADA   65 (151)
T ss_dssp             EEEES-TSHHHHHHHHHHHHTTC-------EEEEEESHH---HHHH----HHHHCEEEEETTEEEEEEEEEEESSHGHHH
T ss_pred             CEEEC-cCHHHHHHHHHHHHCCC-------ceEEEEccc---cHHh----hhheeEEEEecccceecccccccCcchhcc
Confidence            78999 69999999999988653       799999862   2221    111110    11 0111   1122222457


Q ss_pred             CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEech
Q 020022           80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTR  158 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~  158 (332)
                      ...|+||++.-..                -..+..+.++.+..|+..|+.+-|=++..-.+ .++   +|+.++ .+.+.
T Consensus        66 ~~~D~viv~vKa~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~~l-~~~---~~~~~v~~g~~~  125 (151)
T PF02558_consen   66 GPYDLVIVAVKAY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGNEEVL-AEY---FPRPRVLGGVTT  125 (151)
T ss_dssp             STESEEEE-SSGG----------------GHHHHHHHHCTGEETTEEEEEESSSSSHHHHH-HCH---STGSGEEEEEEE
T ss_pred             CCCcEEEEEeccc----------------chHHHHHHHhhccCCCcEEEEEeCCCCcHHHH-HHH---cCCCcEEEEEEe
Confidence            8999999995221                12356666778877777788888866644333 333   344564 44443

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0021  Score=57.71  Aligned_cols=151  Identities=18%  Similarity=0.173  Sum_probs=80.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh----hHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG----VKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~----~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      .++|.|+||+|.+|+.++..|+..|.       ++.++++++.+ ...+    ...|+.+....  ..  ......+.+.
T Consensus         9 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~r~~~~-~~~~~~~~~~~D~~~~~~~--~~--~~~~~~~~~~   76 (260)
T PRK06523          9 GKRALVTGGTKGIGAATVARLLEAGA-------RVVTTARSRPD-DLPEGVEFVAADLTTAEGC--AA--VARAVLERLG   76 (260)
T ss_pred             CCEEEEECCCCchhHHHHHHHHHCCC-------EEEEEeCChhh-hcCCceeEEecCCCCHHHH--HH--HHHHHHHHcC
Confidence            37899999999999999999998764       78889886421 1110    11122111100  00  0001223345


Q ss_pred             CCcEEEEeCCCCCCC-----CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCC
Q 020022           81 GVNIAVMVGGFPRKE-----GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~-----~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      ..|+||+.||.....     ..+   ....+..|+.    +.+.+.+.+.+.. . ..+|++|.....         .+.
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-g~ii~isS~~~~---------~~~  145 (260)
T PRK06523         77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-S-GVIIHVTSIQRR---------LPL  145 (260)
T ss_pred             CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-C-cEEEEEeccccc---------CCC
Confidence            789999999864211     112   2234455654    3455556665543 2 456677654321         111


Q ss_pred             C-CCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          149 P-AKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       149 ~-~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      + ....++.++.-...+-+.+++.++  +..|+
T Consensus       146 ~~~~~~Y~~sK~a~~~l~~~~a~~~~--~~gi~  176 (260)
T PRK06523        146 PESTTAYAAAKAALSTYSKSLSKEVA--PKGVR  176 (260)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence            2 112345455544556666666553  34555

>TIGR02415 23BDH acetoin reductases

Probab=97.08  E-value=0.017  Score=51.58  Aligned_cols=116  Identities=21%  Similarity=0.237  Sum_probs=63.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh---
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA---   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a---   78 (332)
                      +++.|+||+|.+|.+++..|++.|.       ++.+++.++  +.++....++..... ...-+... ++   ..++   
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~i~~~~~~   70 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-------AVAVADLNE--ETAKETAKEINQAGG-KAVAYKLDVSDKDQVFSAIDQ   70 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHH
Confidence            3689999999999999999998764       688898763  333322222322110 00001110 11   1111   


Q ss_pred             ----cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022           79 ----CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        79 ----l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                          +...|+||+++|.....   +.+..   ..+..|+.    +++.+.+.+++... ...++++|.
T Consensus        71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~~iv~~sS  137 (254)
T TIGR02415        71 AAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH-GGKIINAAS  137 (254)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-CeEEEEecc
Confidence                23579999999874321   22333   33455654    33455555555442 356666653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06123 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0051  Score=54.73  Aligned_cols=156  Identities=13%  Similarity=0.106  Sum_probs=78.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhhhc---
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC---   79 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~al---   79 (332)
                      +.+.|+||+|++|++++..|+..|.       .+++.+.+. ++.+.....++......   ...++.......+++   
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~-------~vv~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGY-------AVCLNYLRN-RDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAV   74 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-------eEEEecCCC-HHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHH
Confidence            4699999999999999999998763       567776442 23333222222211100   000111111122222   


Q ss_pred             ----CCCcEEEEeCCCCCCC----CCCHH---HHHHhhHHHHHHHHHHHHhhc-----CCCeEEEEecCcccchHHHHHH
Q 020022           80 ----TGVNIAVMVGGFPRKE----GMERK---DVMSKNVSIYKAQASALEQHA-----APNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        80 ----~~aDiVi~~ag~~~~~----~~~r~---~~~~~n~~i~~~i~~~i~~~~-----~~~~~viv~tNP~~~~~~~~~~  143 (332)
                          ...|+||+++|.....    ..+.+   ..+..|+.....+.+.+.+..     .+.+.++++|.....       
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------  147 (248)
T PRK06123         75 DRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR-------  147 (248)
T ss_pred             HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc-------
Confidence                3679999999875321    12222   345667665444443333221     112457777754321       


Q ss_pred             hCCCCCCCc-EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~-i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.+... -++.++.....+-..+++.+.  +.+++
T Consensus       148 --~~~~~~~~~Y~~sKaa~~~~~~~la~~~~--~~~i~  181 (248)
T PRK06123        148 --LGSPGEYIDYAASKGAIDTMTIGLAKEVA--AEGIR  181 (248)
T ss_pred             --CCCCCCccchHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence              1112111 245555555566666777763  33454

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0039  Score=54.86  Aligned_cols=34  Identities=21%  Similarity=0.221  Sum_probs=30.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ++|.|+||+|.+|++++..|+..|.       +|.++|+++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~~   35 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-------QVTATVRGP   35 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-------EEEEEeCCC
Confidence            5799999999999999999998763       789999875

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.05  E-value=0.028  Score=50.58  Aligned_cols=156  Identities=12%  Similarity=0.115  Sum_probs=81.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC----CccceEeeCC-----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVATTD-----   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~----~~~~~~~~~~-----   74 (332)
                      +.++|.|+||++.+|.+++..|+..|.       .|.+.+... ++.++....++......    ...+++...+     
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   78 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGV-------NIAFTYNSN-VEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELF   78 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC-HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            347899999999999999999998764       577765432 23443333333321000    0001110001     


Q ss_pred             --hhhhcCCCcEEEEeCCCCCC-------C--CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           75 --AVEACTGVNIAVMVGGFPRK-------E--GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~-------~--~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                        ..+.+...|++|+.||....       +  ..+.+   ..+..|+    ...+.+.+.+++..  .+.||++|.....
T Consensus        79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~  156 (260)
T PRK08416         79 KKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG--GGSIISLSSTGNL  156 (260)
T ss_pred             HHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC--CEEEEEEeccccc
Confidence              11223468999999985321       1  11111   2233343    33455555555432  3567777643221


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                               ...|..-.++.++.....+-+.+++.+.  +..|+
T Consensus       157 ---------~~~~~~~~Y~asK~a~~~~~~~la~el~--~~gi~  189 (260)
T PRK08416        157 ---------VYIENYAGHGTSKAAVETMVKYAATELG--EKNIR  189 (260)
T ss_pred             ---------cCCCCcccchhhHHHHHHHHHHHHHHhh--hhCeE
Confidence                     0112112356667666777777887765  34554

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.021  Score=51.74  Aligned_cols=34  Identities=24%  Similarity=0.208  Sum_probs=29.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +++.|+||+|++|..++..|+..|.       +|.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~~   35 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-------EVWATARKA   35 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            4799999999999999999988763       788898874

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0029  Score=55.77  Aligned_cols=36  Identities=31%  Similarity=0.212  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..++|.|+||+|.+|+.++..|+..|.       +++++++++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-------~v~~~~r~~   37 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGH-------QVIGIARSA   37 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCc
Confidence            346899999999999999999998763       788888864

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.0048  Score=55.43  Aligned_cols=99  Identities=11%  Similarity=0.043  Sum_probs=57.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee--CChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT--TDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~--~~~~~al~~a   82 (332)
                      .+++.|+||+|.+|.+++..|+..|.       ++.+.++++. +.++ ..  . +.. ........+  .+..+.+...
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~-------~Vi~~~r~~~-~~~~-~~--~-~~~-~~~~~~D~~~~~~~~~~~~~i   80 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGA-------KVIGLTHSKI-NNSE-SN--D-ESP-NEWIKWECGKEESLDKQLASL   80 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEECCch-hhhh-hh--c-cCC-CeEEEeeCCCHHHHHHhcCCC
Confidence            36899999999999999999998764       6888887641 1111 00  0 100 000011111  1223456789


Q ss_pred             cEEEEeCCCCCCCCCCH---HHHHHhhHHHHHHHHHH
Q 020022           83 NIAVMVGGFPRKEGMER---KDVMSKNVSIYKAQASA  116 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r---~~~~~~n~~i~~~i~~~  116 (332)
                      |++|+.||.......+.   .+.+..|+...-.+++.
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  117 (245)
T PRK12367         81 DVLILNHGINPGGRQDPENINKALEINALSSWRLLEL  117 (245)
T ss_pred             CEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHH
Confidence            99999999753322332   34556676544444433

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.02  E-value=0.0029  Score=51.50  Aligned_cols=76  Identities=21%  Similarity=0.190  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ...||.|+| +|.+|..++..|...|. .     +|.+++++.  ++++..+..+...    ...+....+..+.+.++|
T Consensus        11 ~~~~vlviG-aGg~ar~v~~~L~~~g~-~-----~i~i~nRt~--~ra~~l~~~~~~~----~~~~~~~~~~~~~~~~~D   77 (135)
T PF01488_consen   11 KGKRVLVIG-AGGAARAVAAALAALGA-K-----EITIVNRTP--ERAEALAEEFGGV----NIEAIPLEDLEEALQEAD   77 (135)
T ss_dssp             TTSEEEEES-SSHHHHHHHHHHHHTTS-S-----EEEEEESSH--HHHHHHHHHHTGC----SEEEEEGGGHCHHHHTES
T ss_pred             CCCEEEEEC-CHHHHHHHHHHHHHcCC-C-----EEEEEECCH--HHHHHHHHHcCcc----ccceeeHHHHHHHHhhCC
Confidence            357999999 69999999999998875 2     699999873  5554443333110    112223345667889999


Q ss_pred             EEEEeCCCC
Q 020022           84 IAVMVGGFP   92 (332)
Q Consensus        84 iVi~~ag~~   92 (332)
                      +||.+-+.+
T Consensus        78 ivI~aT~~~   86 (135)
T PF01488_consen   78 IVINATPSG   86 (135)
T ss_dssp             EEEE-SSTT
T ss_pred             eEEEecCCC
Confidence            999986655

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK05855 short chain dehydrogenase; Validated

Probab=97.02  E-value=0.0067  Score=60.89  Aligned_cols=156  Identities=15%  Similarity=0.052  Sum_probs=81.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChh----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV----   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~----   76 (332)
                      ..+++.|+||+|++|.+++..|+..|.       +|.+.+++.  +.++....++......   ....++-.....    
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  384 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-------EVVASDIDE--AAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAE  384 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            346899999999999999999998764       789999874  3343333333221100   000110000111    


Q ss_pred             ---hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           77 ---EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        77 ---~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                         +.+...|++|+.||.....   ..+.   ...+..|+.    ..+.+.+.+.+.. +.+.||++|.-...       
T Consensus       385 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~-------  456 (582)
T PRK05855        385 WVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG-TGGHIVNVASAAAY-------  456 (582)
T ss_pred             HHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEECChhhc-------
Confidence               1123579999999985421   1222   233456654    3444555555544 23567777643221       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.+..-.++.++.....+...++..+.  +.+|+
T Consensus       457 --~~~~~~~~Y~~sKaa~~~~~~~l~~e~~--~~gi~  489 (582)
T PRK05855        457 --APSRSLPAYATSKAAVLMLSECLRAELA--AAGIG  489 (582)
T ss_pred             --cCCCCCcHHHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence              1112122344455444455556666543  33454

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.02  E-value=0.0052  Score=57.50  Aligned_cols=156  Identities=17%  Similarity=0.166  Sum_probs=84.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-cc--ceEeeCC-------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LK--GVVATTD-------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~--~~~~~~~-------   74 (332)
                      .+.+.|+||+|.+|.+++..|+..|.       +|.++++++  ++++....++....... ..  ....+.+       
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~  123 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGL-------NLVLVARNP--DKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKR  123 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------CEEEEECCH--HHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHH
Confidence            35799999999999999999998774       689999984  55555445554311000 00  0111111       


Q ss_pred             hhhhcC--CCcEEEEeCCCCCC---C--CCCHH---HHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           75 AVEACT--GVNIAVMVGGFPRK---E--GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        75 ~~~al~--~aDiVi~~ag~~~~---~--~~~r~---~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                      ..+.+.  +.|++|+.||....   +  +.+.+   ..+..|+...    +.+.+.+.+..  .+.+|++|.-...    
T Consensus       124 l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~g~IV~iSS~a~~----  197 (320)
T PLN02780        124 IKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIINIGSGAAI----  197 (320)
T ss_pred             HHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC--CcEEEEEechhhc----
Confidence            122333  35599999997531   1  22322   3455666544    44444454433  3456677643221    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         ..++.|....++.+..-...+-..++..+.  +..|+
T Consensus       198 ---~~~~~p~~~~Y~aSKaal~~~~~~L~~El~--~~gI~  232 (320)
T PLN02780        198 ---VIPSDPLYAVYAATKAYIDQFSRCLYVEYK--KSGID  232 (320)
T ss_pred             ---cCCCCccchHHHHHHHHHHHHHHHHHHHHh--ccCeE
Confidence               001112222455555555566666776664  34454

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.02  E-value=0.0032  Score=56.45  Aligned_cols=156  Identities=13%  Similarity=0.121  Sum_probs=80.9

Q ss_pred             CCC--CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCCh--
Q 020022            1 MAK--EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDA--   75 (332)
Q Consensus         1 m~~--~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~--   75 (332)
                      |++  ..+++.|+||+|.+|.+++..|+..|.       ++.+.+.+. ++.++    ++.+... ....++.-..+.  
T Consensus         1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~----~l~~~~~~~~~~Dl~~~~~~~~   68 (255)
T PRK06463          1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGA-------KVAVLYNSA-ENEAK----ELREKGVFTIKCDVGNRDQVKK   68 (255)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCc-HHHHH----HHHhCCCeEEEecCCCHHHHHH
Confidence            554  347899999999999999999998763       577766542 12111    1211100 000000000011  


Q ss_pred             -----hhhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           76 -----VEACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        76 -----~~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                           .+.+...|+||+.+|.....   ..+.+   ..+..|+.-    .+.+.+.+++..  .+.||++|.....    
T Consensus        69 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS~~~~----  142 (255)
T PRK06463         69 SKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK--NGAIVNIASNAGI----  142 (255)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CcEEEEEcCHHhC----
Confidence                 12234679999999875321   12222   334556554    566667666543  3566676642211    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+..+..-.++.++.-...+-+.++..+.  +.+|+
T Consensus       143 ----~~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~~i~  176 (255)
T PRK06463        143 ----GTAAEGTTFYAITKAGIIILTRRLAFELG--KYGIR  176 (255)
T ss_pred             ----CCCCCCccHhHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence                00011112345555555566666666654  34565

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.014  Score=51.85  Aligned_cols=117  Identities=16%  Similarity=0.195  Sum_probs=63.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEee-CC--------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVAT-TD--------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~-~~--------   74 (332)
                      .+++.|+||+|.+|.+++..|+..|.       .+.+.++++  +.++....++...... ...-+... ++        
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-------DLALCARRT--DRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVF   72 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHH
Confidence            35799999999999999999998763       688998874  3333333333221100 00000110 11        


Q ss_pred             --hhhhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHH----HHhhcCCCeEEEEecC
Q 020022           75 --AVEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVAN  132 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~~~i~~~----i~~~~~~~~~viv~tN  132 (332)
                        ..+.+...|+||+.+|+.....   .+.   ...+..|+.....+.+.    +.+.. . ..++++|.
T Consensus        73 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-~~iv~~sS  140 (248)
T PRK08251         73 AEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-S-GHLVLISS  140 (248)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-CeEEEEec
Confidence              1223457899999999754321   111   23345666544444443    34433 2 35666653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.01  E-value=0.0098  Score=52.94  Aligned_cols=27  Identities=30%  Similarity=0.283  Sum_probs=23.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhccc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVM   30 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~   30 (332)
                      ..+++.|+||+|.+|.+++..|+..|.
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~   29 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY   29 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC
Confidence            346899999999999999999998763

>PRK06484 short chain dehydrogenase; Validated

Probab=97.01  E-value=0.0067  Score=60.44  Aligned_cols=156  Identities=17%  Similarity=0.166  Sum_probs=84.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------h
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------E   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~-------~   77 (332)
                      .+++.|+||+|.+|.+++..|+..|.       .|.+.++++  +.++.....+.........++.-..+..       +
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  339 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGD-------RLLIIDRDA--EGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQA  339 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHH
Confidence            36899999999999999999998773       789999874  3333222212100000000110001111       1


Q ss_pred             hcCCCcEEEEeCCCCCC--C--CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022           78 ACTGVNIAVMVGGFPRK--E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA  150 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~--~--~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~  150 (332)
                      .+...|++|+.||....  +  ..+   .+..+..|+.....+.+.+..+-.+.+.||++|.....         .+.|.
T Consensus       340 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~---------~~~~~  410 (520)
T PRK06484        340 RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL---------LALPP  410 (520)
T ss_pred             HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc---------CCCCC
Confidence            22457999999997521  1  122   23446667765555555544432234567777754331         11222


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .-.++.++.--..+-+.+++.+.  +..|+
T Consensus       411 ~~~Y~asKaal~~l~~~la~e~~--~~gI~  438 (520)
T PRK06484        411 RNAYCASKAAVTMLSRSLACEWA--PAGIR  438 (520)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence            22345555555566677777664  34555

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=97.00  E-value=0.005  Score=57.10  Aligned_cols=64  Identities=19%  Similarity=0.290  Sum_probs=42.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC---CC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---GV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~---~a   82 (332)
                      |||+||| .|.+|+.++..|+..+.       ++.++|+++  ++.+    .+.+.      ......+..+.++   ++
T Consensus         1 m~Ig~IG-lG~MG~~mA~~L~~~g~-------~v~v~dr~~--~~~~----~~~~~------g~~~~~~~~e~~~~~~~~   60 (301)
T PRK09599          1 MQLGMIG-LGRMGGNMARRLLRGGH-------EVVGYDRNP--EAVE----ALAEE------GATGADSLEELVAKLPAP   60 (301)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCC-------eEEEEECCH--HHHH----HHHHC------CCeecCCHHHHHhhcCCC
Confidence            4899999 79999999999998763       799999874  3332    12221      1123334445444   46


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+||++.
T Consensus        61 dvvi~~v   67 (301)
T PRK09599         61 RVVWLMV   67 (301)
T ss_pred             CEEEEEe
Confidence            8988873

>PRK06484 short chain dehydrogenase; Validated

Probab=96.99  E-value=0.0047  Score=61.56  Aligned_cols=122  Identities=19%  Similarity=0.160  Sum_probs=66.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC------
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD------   74 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~------   74 (332)
                      |+.+.+.+.|+||++.+|..++..|+..|.       .|.+++++.  +.++....++.........++....+      
T Consensus         1 ~~~~~k~~lITGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   71 (520)
T PRK06484          1 SKAQSRVVLVTGAAGGIGRAACQRFARAGD-------QVVVADRNV--ERARERADSLGPDHHALAMDVSDEAQIREGFE   71 (520)
T ss_pred             CCCCCeEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceeEEEeccCCHHHHHHHHH
Confidence            455567899999999999999999998763       689998874  33332222221100000001100001      


Q ss_pred             -hhhhcCCCcEEEEeCCCCC---CC--CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022           75 -AVEACTGVNIAVMVGGFPR---KE--GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        75 -~~~al~~aDiVi~~ag~~~---~~--~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                       ..+.+...|++|+.||...   .+  ..+   ....+..|+.    .++.+.+.+.+.. ..+.+++++.
T Consensus        72 ~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~~iv~isS  141 (520)
T PRK06484         72 QLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG-HGAAIVNVAS  141 (520)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCCeEEEECC
Confidence             1122346899999998731   11  122   2334556654    4455555554433 2336777764

>PRK07023 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0026  Score=56.58  Aligned_cols=34  Identities=24%  Similarity=0.285  Sum_probs=29.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |+|.|+||+|++|.+++..|+..|.       ++.+++++.
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~-------~v~~~~r~~   35 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGI-------AVLGVARSR   35 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCC-------EEEEEecCc
Confidence            5899999999999999999998763       688888764

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0081  Score=54.63  Aligned_cols=35  Identities=23%  Similarity=0.132  Sum_probs=29.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .+.+.|+||+|++|.+++..|+..|.       +|.+.+++.
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~-------~V~~~~r~~   44 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGF-------PVALGARRV   44 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            35799999999999999999998764       688888763

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=96.95  E-value=0.0051  Score=60.78  Aligned_cols=72  Identities=13%  Similarity=0.079  Sum_probs=46.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcCCccceEeeCChhhhcC--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFPLLKGVVATTDAVEACT--   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~~~~~~~~~~~~~~al~--   80 (332)
                      +.++|++|| .|.||+.++..|+..|.       +|+.||++.  ++.+    ++.+. .......+....+..++++  
T Consensus         5 ~~~~IG~IG-LG~MG~~mA~nL~~~G~-------~V~V~NRt~--~k~~----~l~~~~~~~Ga~~~~~a~s~~e~v~~l   70 (493)
T PLN02350          5 ALSRIGLAG-LAVMGQNLALNIAEKGF-------PISVYNRTT--SKVD----ETVERAKKEGNLPLYGFKDPEDFVLSI   70 (493)
T ss_pred             CCCCEEEEe-eHHHHHHHHHHHHhCCC-------eEEEECCCH--HHHH----HHHHhhhhcCCcccccCCCHHHHHhcC
Confidence            457999999 89999999999998774       799999974  3333    22221 0000011223344555555  


Q ss_pred             -CCcEEEEeC
Q 020022           81 -GVNIAVMVG   89 (332)
Q Consensus        81 -~aDiVi~~a   89 (332)
                       .+|+||+..
T Consensus        71 ~~~dvIi~~v   80 (493)
T PLN02350         71 QKPRSVIILV   80 (493)
T ss_pred             CCCCEEEEEC
Confidence             499999983

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.013  Score=52.70  Aligned_cols=120  Identities=12%  Similarity=0.185  Sum_probs=66.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCcc--ceEee--CC----h
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVAT--TD----A   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~--~~~~~--~~----~   75 (332)
                      ..++|.|+||+|.+|.+++..|+..+-.      .+.+++++++ ..++....++.........  ....+  .+    .
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~------~V~~~~r~~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~   79 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPA------RVVLAALPDD-PRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVI   79 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCC------eEEEEeCCcc-hhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHH
Confidence            4578999999999999999999876411      6889988752 1133333334321100000  00111  11    1


Q ss_pred             hhhc--CCCcEEEEeCCCCCCCCC---CH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022           76 VEAC--TGVNIAVMVGGFPRKEGM---ER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        76 ~~al--~~aDiVi~~ag~~~~~~~---~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      .+..  .+.|++|+.+|.......   +.   .+.+..|..    ..+.+.+.+.+.. . ..++++|.
T Consensus        80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~-~~iv~isS  146 (253)
T PRK07904         80 DAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-F-GQIIAMSS  146 (253)
T ss_pred             HHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-C-ceEEEEec
Confidence            1111  369999998887532211   11   124566653    3355677776654 2 45666664

>PRK06545 prephenate dehydrogenase; Validated

Probab=96.93  E-value=0.0064  Score=57.90  Aligned_cols=68  Identities=24%  Similarity=0.323  Sum_probs=44.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+||| .|.||.+++..|...|.       ++.++|.+++...+   ....   ......  ...++..+++++||+|
T Consensus         1 ~~I~iIG-~GliG~siA~~L~~~G~-------~v~i~~~~~~~~~~---~~a~---~~~~~~--~~~~~~~~~~~~aDlV   64 (359)
T PRK06545          1 RTVLIVG-LGLIGGSLALAIKAAGP-------DVFIIGYDPSAAQL---ARAL---GFGVID--ELAADLQRAAAEADLI   64 (359)
T ss_pred             CeEEEEE-eCHHHHHHHHHHHhcCC-------CeEEEEeCCCHHHH---HHHh---cCCCCc--ccccCHHHHhcCCCEE
Confidence            4799999 79999999999998763       57788877532111   1101   111111  1234567788999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        65 ilav   68 (359)
T PRK06545         65 VLAV   68 (359)
T ss_pred             EEeC
Confidence            9984

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.018  Score=51.40  Aligned_cols=35  Identities=20%  Similarity=0.213  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .++|.|+||+|++|++++..|+..|.       ++.+.++++
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~G~-------~Vi~~~r~~   43 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQAGA-------KVVLASRRV   43 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            47999999999999999999998763       688888874

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.92  E-value=0.014  Score=51.91  Aligned_cols=26  Identities=23%  Similarity=0.350  Sum_probs=22.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhccc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVM   30 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~   30 (332)
                      .+.+.|+||+|++|.+++..|+..|.
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~   28 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGF   28 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCC
Confidence            35789999999999999999998763

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.91  E-value=0.057  Score=48.46  Aligned_cols=156  Identities=13%  Similarity=0.107  Sum_probs=78.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CCh-------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDA-------   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~-------   75 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       .+++..++. .+.++....++...... ...+... ++.       
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-------~vvi~~~~~-~~~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~i~~~~   76 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKA-------KVVINYRSD-EEEANDVAEEIKKAGGE-AIAVKGDVTVESDVVNLI   76 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHHcCCe-EEEEEecCCCHHHHHHHH
Confidence            347999999999999999999998763       566766542 22222222233221100 0001110 111       


Q ss_pred             ---hhhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           76 ---VEACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        76 ---~~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                         .+.+...|++|+.+|.....   ..+.+   ..+..|+.    ..+.+.+.+.+.. ..+.++++|.-..       
T Consensus        77 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~~sS~~~-------  148 (261)
T PRK08936         77 QTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIINMSSVHE-------  148 (261)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEccccc-------
Confidence               11123579999999975321   12222   33556643    3345555555543 2356666664111       


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       . ...|..-.++.++.-...+-..+++.+.  +..|+
T Consensus       149 -~-~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~  182 (261)
T PRK08936        149 -Q-IPWPLFVHYAASKGGVKLMTETLAMEYA--PKGIR  182 (261)
T ss_pred             -c-CCCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence             0 1122222345555444455555665553  34565

>PLN00016 RNA-binding protein; Provisional

Probab=96.91  E-value=0.0045  Score=59.25  Aligned_cols=36  Identities=19%  Similarity=0.318  Sum_probs=31.1

Q ss_pred             CCcEEEEE----cCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVT----GAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~Ii----Ga~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +++||.|+    ||+|++|++++..|+..|.       +|++++++.
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-------~V~~l~R~~   90 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-------EVTLFTRGK   90 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCC-------EEEEEecCC
Confidence            45799999    9999999999999998763       788898874

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.91  E-value=0.048  Score=49.22  Aligned_cols=32  Identities=22%  Similarity=0.209  Sum_probs=26.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI   44 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~   44 (332)
                      ..+.|+||+|.+|.+++..|+..|.       ++.+.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~-------~V~~~~~   33 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGY-------RVVLHYH   33 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCC-------eEEEEcC
Confidence            3688999999999999999998774       5777654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08324 short chain dehydrogenase; Validated

Probab=96.90  E-value=0.0083  Score=62.04  Aligned_cols=117  Identities=21%  Similarity=0.198  Sum_probs=63.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhh-----
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEA-----   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~a-----   78 (332)
                      ++|.|+||+|++|+.++..|+..|.       +|+++|+++  +.++.....+.....  ....++.......++     
T Consensus       423 k~vLVTGasggIG~~la~~L~~~Ga-------~Vvl~~r~~--~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~  493 (681)
T PRK08324        423 KVALVTGAAGGIGKATAKRLAAEGA-------CVVLADLDE--EAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAA  493 (681)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcC-------EEEEEeCCH--HHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHH
Confidence            6899999999999999999998763       799999874  333322222221100  000000000111122     


Q ss_pred             --cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecC
Q 020022           79 --CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        79 --l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tN  132 (332)
                        +.+.|+||+++|.....   ..+.   ...+..|......+    .+.+++.. ..+.++++|.
T Consensus       494 ~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~vsS  558 (681)
T PRK08324        494 LAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVFIAS  558 (681)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEEECC
Confidence              23689999999975322   1222   22344555444444    44444433 2245666664

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.055  Score=48.67  Aligned_cols=117  Identities=19%  Similarity=0.182  Sum_probs=65.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEee-CCh-------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVAT-TDA-------   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~-~~~-------   75 (332)
                      .+.+.|+||+|.+|.+++..|+..|.       +|.+.++++  +.++....++...... ....+... ++.       
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   78 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAGA-------SVAICGRDE--ERLASAEARLREKFPGARLLAARCDVLDEADVAAFA   78 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHH
Confidence            36899999999999999999998764       688999874  3444333333221100 00001110 111       


Q ss_pred             ---hhhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhh----HHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           76 ---VEACTGVNIAVMVGGFPRKE---GMERK---DVMSKN----VSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        76 ---~~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n----~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                         .+.+...|++|+.||.....   ..+.+   ..+..|    ....+.+.+.+++..  .+.|+++|.
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS  146 (265)
T PRK07062         79 AAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA--AASIVCVNS  146 (265)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC--CcEEEEecc
Confidence               11234679999999975321   11222   223333    344566666666543  246666664

>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]

Probab=96.89  E-value=0.0035  Score=54.78  Aligned_cols=109  Identities=18%  Similarity=0.285  Sum_probs=71.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhh----hhhHHHH---hhhh-cC--C-----ccce
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL----NGVKMEL---VDAA-FP--L-----LKGV   69 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l----~~~~~dl---~~~~-~~--~-----~~~~   69 (332)
                      .-||+|+| +|-+|+.+|..++..|.       ++.|||+.+  +.+    +....||   ++.. ..  +     ...+
T Consensus         3 ~~ki~ivg-Sgl~g~~WAmlFAs~Gy-------qVqlYDI~e--~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~i   72 (313)
T KOG2305|consen    3 FGKIAIVG-SGLVGSSWAMLFASSGY-------QVQLYDILE--KQLQTALENVEKELRKLEEHGLLRGNLSADEQLALI   72 (313)
T ss_pred             ccceeEee-cccccchHHHHHhccCc-------eEEEeeccH--HHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHH
Confidence            45999999 89999999999999875       899999975  222    1122222   2211 11  0     1345


Q ss_pred             EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        70 ~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                      ..++++.|..++|=.|              .+...+.+...+.+.+++.+...|.  .|+.|....+|..
T Consensus        73 s~t~~l~E~vk~Ai~i--------------QEcvpE~L~lkk~ly~qlD~i~d~~--tIlaSSTSt~mpS  126 (313)
T KOG2305|consen   73 SGTTSLNELVKGAIHI--------------QECVPEDLNLKKQLYKQLDEIADPT--TILASSTSTFMPS  126 (313)
T ss_pred             hCCccHHHHHhhhhhH--------------HhhchHhhHHHHHHHHHHHHhcCCc--eEEeccccccChH
Confidence            6677888888887433              1223445677788999999988554  5667665555443

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.87  E-value=0.0086  Score=55.53  Aligned_cols=36  Identities=28%  Similarity=0.214  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       ++++.|...
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-------~Vv~~~~~~   46 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-------TVVVNDVAS   46 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCc
Confidence            347899999999999999999998763       688888753

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.87  E-value=0.0061  Score=58.37  Aligned_cols=53  Identities=15%  Similarity=0.234  Sum_probs=42.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||||.|.+|..++..|...|.       ++.++|+++.                         .+..+++++||+
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~-------~V~~~d~~~~-------------------------~~~~~~~~~aDl  145 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGY-------QVRILEQDDW-------------------------DRAEDILADAGM  145 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCC-------eEEEeCCCcc-------------------------hhHHHHHhcCCE
Confidence            37999999789999999999998763       7999997520                         123466789999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||++.
T Consensus       146 Vilav  150 (374)
T PRK11199        146 VIVSV  150 (374)
T ss_pred             EEEeC
Confidence            99984

>PRK12743 oxidoreductase; Provisional

Probab=96.85  E-value=0.071  Score=47.75  Aligned_cols=118  Identities=12%  Similarity=0.104  Sum_probs=61.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV----   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~----   76 (332)
                      +++|.|+||+|.+|++++..|+..|.       ++.+.+... .+.++....++..... ...-+... ++   ..    
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-------~V~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~   72 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-------DIGITWHSD-EEGAKETAEEVRSHGV-RAEIRQLDLSDLPEGAQALD   72 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCC-hHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHH
Confidence            35899999999999999999998763       576665432 2223222222221110 00001110 11   11    


Q ss_pred             ---hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecC
Q 020022           77 ---EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVAN  132 (332)
Q Consensus        77 ---~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tN  132 (332)
                         +.+...|+||+.+|.....   ..+.   ...+..|+.....+.+.+.    +.. +.+++|++|.
T Consensus        73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~g~ii~isS  140 (256)
T PRK12743         73 KLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQG-QGGRIINITS  140 (256)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEEEee
Confidence               1224579999999875321   1222   2345566654444444433    322 2356777765

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.85  E-value=0.019  Score=50.70  Aligned_cols=148  Identities=14%  Similarity=0.057  Sum_probs=76.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCC-------hh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTD-------AV   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~-------~~   76 (332)
                      ++++.|+||+|.+|.+++..|+..|.       ++.+.|+++. + .   ..++.+... ....++....+       ..
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~-~-~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   69 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-------PVIVSYRTHY-P-A---IDGLRQAGAQCIQADFSTNAGIMAFIDELK   69 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCch-h-H---HHHHHHcCCEEEEcCCCCHHHHHHHHHHHH
Confidence            35799999999999999999998763       6888888742 1 1   111211100 00001100001       11


Q ss_pred             hhcCCCcEEEEeCCCCCC--C-CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           77 EACTGVNIAVMVGGFPRK--E-GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~--~-~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                      +.+...|++|+.+|....  + ..+.   +..+..|+...    +.+.+.+.+...+.+.++++|....       .  .
T Consensus        70 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~-------~--~  140 (236)
T PRK06483         70 QHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV-------E--K  140 (236)
T ss_pred             hhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh-------c--c
Confidence            223458999999986422  1 1222   23344555433    3444444443211245666553211       1  1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      +.+..-.++.++.--..+-+.+++.+.
T Consensus       141 ~~~~~~~Y~asKaal~~l~~~~a~e~~  167 (236)
T PRK06483        141 GSDKHIAYAASKAALDNMTLSFAAKLA  167 (236)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHC
Confidence            222222455566555677777888775

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=96.84  E-value=0.005  Score=54.52  Aligned_cols=35  Identities=23%  Similarity=0.133  Sum_probs=29.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +++|.|+||+|.+|++++..|+..|.       .+.+.++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~-------~vi~~~r~~   36 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGY-------RVIATYFSG   36 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCc
Confidence            35899999999999999999998763       688888874

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.017  Score=53.25  Aligned_cols=119  Identities=23%  Similarity=0.187  Sum_probs=64.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC--Ch-------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT--DA-------   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~--~~-------   75 (332)
                      .++|.|+||+|.+|..++..|+..|.       ++.+.++++  +.++....++............++.  +.       
T Consensus         9 gk~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          9 GKVVVVTGAARGIGAELARRLHARGA-------KLALVDLEE--AELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999998774       789999874  3443333333211000000011110  11       


Q ss_pred             hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecC
Q 020022           76 VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA-APNCKVLVVAN  132 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tN  132 (332)
                      .+.+...|+||+.+|.....   ..+.   ...+..|+.....+.+.+..+. .+.+.++++|.
T Consensus        80 ~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS  143 (296)
T PRK05872         80 VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS  143 (296)
T ss_pred             HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence            12235689999999975321   1222   2345566655544444443221 11245666664

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.83  E-value=0.013  Score=52.77  Aligned_cols=155  Identities=15%  Similarity=0.241  Sum_probs=78.9

Q ss_pred             CCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCC----
Q 020022            4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTD----   74 (332)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~----   74 (332)
                      +.+.+.|+||+  +.+|..++..|+..|.       ++.+.+++.+..+.+....++.+....   ...++.-..+    
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~   77 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-------ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEET   77 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHH
Confidence            45678999975  6899999999998764       677776542111222112222211000   0001100001    


Q ss_pred             ---hhhhcCCCcEEEEeCCCCCC-----C--CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccch
Q 020022           75 ---AVEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTN  137 (332)
Q Consensus        75 ---~~~al~~aDiVi~~ag~~~~-----~--~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~  137 (332)
                         ..+.+...|++|+.+|....     +  ..+.+   ..+..|+    ...+.+.+.+++    .++|+++|..... 
T Consensus        78 ~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~----~g~Iv~isS~~~~-  152 (258)
T PRK07370         78 FETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE----GGSIVTLTYLGGV-  152 (258)
T ss_pred             HHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh----CCeEEEEeccccc-
Confidence               11223468999999997531     1  11222   3344454    334555555542    2467777643221 


Q ss_pred             HHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          138 ALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       138 ~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                              .+.|..-.++.++.--..+-+.++..++  +..|+
T Consensus       153 --------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~  185 (258)
T PRK07370        153 --------RAIPNYNVMGVAKAALEASVRYLAAELG--PKNIR  185 (258)
T ss_pred             --------cCCcccchhhHHHHHHHHHHHHHHHHhC--cCCeE
Confidence                    1122222355556555677777877775  45665

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.83  E-value=0.01  Score=53.46  Aligned_cols=35  Identities=17%  Similarity=0.234  Sum_probs=29.3

Q ss_pred             CcEEEEEcC--CCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .+++.|+||  ++.+|.+++..|+..|.       .|++.|++.
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~G~-------~v~l~~r~~   43 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQGA-------EVVLTGFGR   43 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHCCC-------EEEEecCcc
Confidence            468999998  68999999999998764       688988753

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.032  Score=51.93  Aligned_cols=162  Identities=10%  Similarity=0.036  Sum_probs=86.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE---ee-CC------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV---AT-TD------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~---~~-~~------   74 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.+++.  ++++....++.... +. .++.   .. ++      
T Consensus        14 gk~~lITGas~GIG~~~a~~La~~G~-------~Vil~~R~~--~~~~~~~~~l~~~~-~~-~~v~~~~~Dl~d~~sv~~   82 (313)
T PRK05854         14 GKRAVVTGASDGLGLGLARRLAAAGA-------EVILPVRNR--AKGEAAVAAIRTAV-PD-AKLSLRALDLSSLASVAA   82 (313)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhC-CC-CceEEEEecCCCHHHHHH
Confidence            46899999999999999999998763       788998874  34433333332211 00 0111   10 11      


Q ss_pred             ----hhhhcCCCcEEEEeCCCCCCC--CC---CHHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           75 ----AVEACTGVNIAVMVGGFPRKE--GM---ERKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        75 ----~~~al~~aDiVi~~ag~~~~~--~~---~r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                          ..+.....|++|+.||....+  ..   ..+..+..|.-    +.+.+.+.+++.   .++|+++|.-.......-
T Consensus        83 ~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~---~~riv~vsS~~~~~~~~~  159 (313)
T PRK05854         83 LGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG---RARVTSQSSIAARRGAIN  159 (313)
T ss_pred             HHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC---CCCeEEEechhhcCCCcC
Confidence                112234589999999974322  11   22334555543    355555555442   245666654322110000


Q ss_pred             H-H--hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 K-E--FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~-~--~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      . .  ....++....++.+++-...+-+.+++++......|+
T Consensus       160 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~  201 (313)
T PRK05854        160 WDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGIT  201 (313)
T ss_pred             cccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeE
Confidence            0 0  0001222234666777767777778876655455665

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.034  Score=49.20  Aligned_cols=121  Identities=12%  Similarity=0.051  Sum_probs=67.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe----eCCh-
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA----TTDA-   75 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~----~~~~-   75 (332)
                      |+.+.+.+.|+||++.+|.+++..|+..|.       .|.++++++  +.++....++...... ...+..    ..+. 
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~l~~~~~~i~~~~~~-~~~~~~D~~~~~~~~   70 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGA-------TLILCDQDQ--SALKDTYEQCSALTDN-VYSFQLKDFSQESIR   70 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCCC-eEEEEccCCCHHHHH
Confidence            666667999999999999999999998874       789998874  4443333333221100 000100    0011 


Q ss_pred             ------hhhcC-CCcEEEEeCCCCCCC----CCCHHHH---HHhhH----HHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           76 ------VEACT-GVNIAVMVGGFPRKE----GMERKDV---MSKNV----SIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        76 ------~~al~-~aDiVi~~ag~~~~~----~~~r~~~---~~~n~----~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                            .+.+. ..|++|+.+|....+    ..+.+++   +..|.    ...+.+.+.+.+.. +.+.|+++|.
T Consensus        71 ~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS  144 (227)
T PRK08862         71 HLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRN-KKGVIVNVIS  144 (227)
T ss_pred             HHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCceEEEEec
Confidence                  12234 689999999753222    1233332   22333    34455566666543 2356777764

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=96.81  E-value=0.0014  Score=59.05  Aligned_cols=168  Identities=15%  Similarity=0.126  Sum_probs=79.6

Q ss_pred             EEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhhc--C----CccceEe-eCC-------
Q 020022           10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAF--P----LLKGVVA-TTD-------   74 (332)
Q Consensus        10 IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~~--~----~~~~~~~-~~~-------   74 (332)
                      ||||+||+|+++...|+..+-   .  .+|.++-+..+..... .....+.+...  .    ...++++ ..|       
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~---~--~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG   75 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPP---D--VKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG   75 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS----T--TEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred             CcCCCcHHHHHHHHHHHcCCC---C--cEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence            699999999999999887642   1  1466665554221111 11111111000  0    0122222 112       


Q ss_pred             ----hhhhc-CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH------
Q 020022           75 ----AVEAC-TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE------  143 (332)
Q Consensus        75 ----~~~al-~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~------  143 (332)
                          .++.+ +.+|+|||+|+.-. ...+..++...|+..++++++...+...  ..++.+|. .-+....-..      
T Consensus        76 L~~~~~~~L~~~v~~IiH~Aa~v~-~~~~~~~~~~~NV~gt~~ll~la~~~~~--~~~~~iST-a~v~~~~~~~~~~~~~  151 (249)
T PF07993_consen   76 LSDEDYQELAEEVDVIIHCAASVN-FNAPYSELRAVNVDGTRNLLRLAAQGKR--KRFHYIST-AYVAGSRPGTIEEKVY  151 (249)
T ss_dssp             --HHHHHHHHHH--EEEE--SS-S-BS-S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEE-GGGTTS-TTT--SSS-
T ss_pred             CChHHhhccccccceeeecchhhh-hcccchhhhhhHHHHHHHHHHHHHhccC--cceEEecc-ccccCCCCCccccccc
Confidence                23333 68999999987542 2234455678899999999999886442  25666665 2111110000      


Q ss_pred             --hCCCC-CCCc---EEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe
Q 020022          144 --FAPSI-PAKN---ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG  186 (332)
Q Consensus       144 --~~~~~-~~~~---i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G  186 (332)
                        ..... +...   -+.-++..+.++.+..+++.|++..=++...|.|
T Consensus       152 ~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  152 PEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG  200 (249)
T ss_dssp             HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred             ccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence              00000 1112   3455788888888888888888877777666555

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.79  E-value=0.012  Score=51.35  Aligned_cols=34  Identities=26%  Similarity=0.445  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ..||+|+| +|.+|+.++..|+..|+ +     +++|+|.+
T Consensus        21 ~~~V~IvG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICG-LGGLGSNVAINLARAGI-G-----KLILVDFD   54 (200)
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHcCC-C-----EEEEECCC
Confidence            46999999 69999999999999885 3     79999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PLN02256 arogenate dehydrogenase

Probab=96.79  E-value=0.015  Score=54.07  Aligned_cols=65  Identities=15%  Similarity=0.254  Sum_probs=43.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc-CCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-TGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al-~~a   82 (332)
                      +.+||+||| .|.+|..++..|...|.       +|..+|.+.  .  ...+.++         .+...++..+.+ .++
T Consensus        35 ~~~kI~IIG-~G~mG~slA~~L~~~G~-------~V~~~d~~~--~--~~~a~~~---------gv~~~~~~~e~~~~~a   93 (304)
T PLN02256         35 RKLKIGIVG-FGNFGQFLAKTFVKQGH-------TVLATSRSD--Y--SDIAAEL---------GVSFFRDPDDFCEEHP   93 (304)
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCC-------EEEEEECcc--H--HHHHHHc---------CCeeeCCHHHHhhCCC
Confidence            457999999 79999999999987652       788999873  1  1111111         111234555555 479


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+||++.
T Consensus        94 DvVilav  100 (304)
T PLN02256         94 DVVLLCT  100 (304)
T ss_pred             CEEEEec
Confidence            9999984

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.79  E-value=0.0093  Score=55.63  Aligned_cols=102  Identities=18%  Similarity=0.246  Sum_probs=62.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..+||+|+| +|.+|..++..|...+. .     +|.++|+++  +++...+..+..       .+....+..+++.++|
T Consensus       177 ~~~~V~ViG-aG~iG~~~a~~L~~~g~-~-----~V~v~~r~~--~ra~~la~~~g~-------~~~~~~~~~~~l~~aD  240 (311)
T cd05213         177 KGKKVLVIG-AGEMGELAAKHLAAKGV-A-----EITIANRTY--ERAEELAKELGG-------NAVPLDELLELLNEAD  240 (311)
T ss_pred             cCCEEEEEC-cHHHHHHHHHHHHHcCC-C-----EEEEEeCCH--HHHHHHHHHcCC-------eEEeHHHHHHHHhcCC
Confidence            357999999 69999999988887542 1     689999874  333322222211       1111234677889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      +||.+.+.+..            ........   .....++.+++-+++|-|+
T Consensus       241 vVi~at~~~~~------------~~~~~~~~---~~~~~~~~~viDlavPrdi  278 (311)
T cd05213         241 VVISATGAPHY------------AKIVERAM---KKRSGKPRLIVDLAVPRDI  278 (311)
T ss_pred             EEEECCCCCch------------HHHHHHHH---hhCCCCCeEEEEeCCCCCC
Confidence            99999765521            11111211   1111134677789999884

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.78  E-value=0.008  Score=53.21  Aligned_cols=94  Identities=19%  Similarity=0.186  Sum_probs=55.3

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCCcEEE
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVNIAV   86 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~aDiVi   86 (332)
                      |+|+||+|.+|+.++..|+..+.       +|+.+=++++.+..    ..+.+..... ..++.-...+.++++|+|.||
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-------~V~~l~R~~~~~~~----~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-------SVRALVRDPSSDRA----QQLQALGAEVVEADYDDPESLVAALKGVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-------CEEEEESSSHHHHH----HHHHHTTTEEEES-TT-HHHHHHHHTTCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-------CcEEEEeccchhhh----hhhhcccceEeecccCCHHHHHHHHcCCceEE
Confidence            78999999999999999998542       56666665421111    1222211100 001111124668899999999


Q ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcC
Q 020022           87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA  122 (332)
Q Consensus        87 ~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~  122 (332)
                      ++-+...   .       .-.+..+.+++...+.+-
T Consensus        70 ~~~~~~~---~-------~~~~~~~~li~Aa~~agV   95 (233)
T PF05368_consen   70 SVTPPSH---P-------SELEQQKNLIDAAKAAGV   95 (233)
T ss_dssp             EESSCSC---C-------CHHHHHHHHHHHHHHHT-
T ss_pred             eecCcch---h-------hhhhhhhhHHHhhhcccc
Confidence            9866442   1       123445577777777763

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.77  E-value=0.0079  Score=54.00  Aligned_cols=38  Identities=16%  Similarity=0.125  Sum_probs=31.0

Q ss_pred             CCCC--CcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            1 MAKE--PVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         1 m~~~--~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      |+++  .+.+.|+||+  +.+|..++..|+..|.       +|.+.+++
T Consensus         1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~-------~Vi~~~r~   42 (252)
T PRK06079          1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGA-------TVIYTYQN   42 (252)
T ss_pred             CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEecCc
Confidence            6653  4689999987  6899999999998774       68888876

>PRK08507 prephenate dehydrogenase; Validated

Probab=96.76  E-value=0.012  Score=53.82  Aligned_cols=66  Identities=12%  Similarity=0.118  Sum_probs=41.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| .|.+|..++..|...+..     .+|..+|+++  +.++.    +.+...     .....+..+ +.+||+|
T Consensus         1 m~I~iIG-~G~mG~sla~~l~~~g~~-----~~v~~~d~~~--~~~~~----~~~~g~-----~~~~~~~~~-~~~aD~V   62 (275)
T PRK08507          1 MKIGIIG-LGLMGGSLGLALKEKGLI-----SKVYGYDHNE--LHLKK----ALELGL-----VDEIVSFEE-LKKCDVI   62 (275)
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCC-----CEEEEEcCCH--HHHHH----HHHCCC-----CcccCCHHH-HhcCCEE
Confidence            4899999 799999999999987641     2688899874  32221    111110     001123444 3469999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        63 ilav   66 (275)
T PRK08507         63 FLAI   66 (275)
T ss_pred             EEeC
Confidence            9984

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.74  E-value=0.013  Score=57.40  Aligned_cols=117  Identities=27%  Similarity=0.300  Sum_probs=66.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC--Chh------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT--DAV------   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~--~~~------   76 (332)
                      .+++.|+||+|.+|..++..|+..|.       ++.++|.....+.+.....++.   .. .....++.  ...      
T Consensus       210 g~~vlItGasggIG~~la~~l~~~Ga-------~vi~~~~~~~~~~l~~~~~~~~---~~-~~~~Dv~~~~~~~~~~~~~  278 (450)
T PRK08261        210 GKVALVTGAARGIGAAIAEVLARDGA-------HVVCLDVPAAGEALAAVANRVG---GT-ALALDITAPDAPARIAEHL  278 (450)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCccHHHHHHHHHHcC---Ce-EEEEeCCCHHHHHHHHHHH
Confidence            36899999999999999999998764       7888887532222221111111   00 00011110  111      


Q ss_pred             -hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHh--hcCCCeEEEEecC
Q 020022           77 -EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQ--HAAPNCKVLVVAN  132 (332)
Q Consensus        77 -~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~--~~~~~~~viv~tN  132 (332)
                       +.....|+||+++|.....   ..+   ....+..|+.-...+.+.+..  ...+..+++++|.
T Consensus       279 ~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS  343 (450)
T PRK08261        279 AERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS  343 (450)
T ss_pred             HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence             1123589999999976422   122   234456777777777666654  2123456777764

>PTZ00431 pyrroline carboxylate reductase; Provisional

Probab=96.74  E-value=0.014  Score=52.89  Aligned_cols=63  Identities=22%  Similarity=0.240  Sum_probs=44.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..|||+||| +|.+|++++..|...+...+   -++..+|+++  +.+                .+....+..++++++|
T Consensus         2 ~~mkI~iIG-~G~mG~ai~~~l~~~~~~~~---~~i~~~~~~~--~~~----------------~~~~~~~~~~~~~~~D   59 (260)
T PTZ00431          2 ENIRVGFIG-LGKMGSALAYGIENSNIIGK---ENIYYHTPSK--KNT----------------PFVYLQSNEELAKTCD   59 (260)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCCCc---ceEEEECCCh--hcC----------------CeEEeCChHHHHHhCC
Confidence            346999999 79999999999998764321   1588888763  211                0112345566778999


Q ss_pred             EEEEe
Q 020022           84 IAVMV   88 (332)
Q Consensus        84 iVi~~   88 (332)
                      +||++
T Consensus        60 ~Vila   64 (260)
T PTZ00431         60 IIVLA   64 (260)
T ss_pred             EEEEE
Confidence            99988

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.044  Score=48.97  Aligned_cols=148  Identities=9%  Similarity=0.029  Sum_probs=77.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh----
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE----   77 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~----   77 (332)
                      +++.|+||+|.+|.+++..|+..|.       .|.+.|++.  +.++....++.... ....-+... ++   ..+    
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~   71 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGA-------NVVITGRTK--EKLEEAKLEIEQFP-GQVLTVQMDVRNPEDVQKMVEQ   71 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHH
Confidence            5789999999999999999998764       688999874  33333333332211 000001110 11   111    


Q ss_pred             ---hcCCCcEEEEeCCCCCC-C--CCCH---HHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           78 ---ACTGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        78 ---al~~aDiVi~~ag~~~~-~--~~~r---~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                         .+...|+||+.+|.... +  ..+.   ...+..|+...-.+.+.+    .+.. +.+.++++|.-..       ..
T Consensus        72 ~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~ii~isS~~~-------~~  143 (252)
T PRK07677         72 IDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKG-IKGNIINMVATYA-------WD  143 (252)
T ss_pred             HHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CCEEEEEEcChhh-------cc
Confidence               12467999999885321 1  2233   334566665444444444    3322 2356777763211       00


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                       +. +..-.++.+......+-+.+|+.+.
T Consensus       144 -~~-~~~~~Y~~sKaa~~~~~~~la~e~~  170 (252)
T PRK07677        144 -AG-PGVIHSAAAKAGVLAMTRTLAVEWG  170 (252)
T ss_pred             -CC-CCCcchHHHHHHHHHHHHHHHHHhC
Confidence             11 1111244455555566667777654

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.72  E-value=0.0049  Score=56.33  Aligned_cols=74  Identities=22%  Similarity=0.274  Sum_probs=46.0

Q ss_pred             CC-CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEE-EEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            1 MA-KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~-~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      |+ |+++||+||| .|.+|+.++..|... .  +  ..++ .++|+++  ++.+..+..+.   .     ....++..+.
T Consensus         1 ~~~m~~irIGIIG-~G~IG~~~a~~L~~~-~--~--~~el~aV~dr~~--~~a~~~a~~~g---~-----~~~~~~~eel   64 (271)
T PRK13302          1 MSSRPELRVAIAG-LGAIGKAIAQALDRG-L--P--GLTLSAVAVRDP--QRHADFIWGLR---R-----PPPVVPLDQL   64 (271)
T ss_pred             CCCCCeeEEEEEC-ccHHHHHHHHHHHhc-C--C--CeEEEEEECCCH--HHHHHHHHhcC---C-----CcccCCHHHH
Confidence            55 3568999999 799999999888753 0  0  1244 4788864  33322211111   0     0123456677


Q ss_pred             cCCCcEEEEeCC
Q 020022           79 CTGVNIAVMVGG   90 (332)
Q Consensus        79 l~~aDiVi~~ag   90 (332)
                      +.++|+|++++.
T Consensus        65 l~~~D~Vvi~tp   76 (271)
T PRK13302         65 ATHADIVVEAAP   76 (271)
T ss_pred             hcCCCEEEECCC
Confidence            789999999964

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.72  E-value=0.018  Score=51.84  Aligned_cols=36  Identities=19%  Similarity=0.091  Sum_probs=29.3

Q ss_pred             CCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +.+.+.|+||+  +.+|.+++..|+..|.       .|.+.|+++
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-------~v~l~~r~~   46 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-------ELAVTYLND   46 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-------EEEEEeCCh
Confidence            34678999976  3899999999998763       688888874

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=96.70  E-value=0.0085  Score=55.37  Aligned_cols=63  Identities=24%  Similarity=0.358  Sum_probs=44.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| .|.||+.++..|+..|.       ++..+|+++  . .+    .+...      ......+..++.++||+|
T Consensus         1 m~Ig~IG-lG~MG~~ma~~L~~~G~-------~v~v~~~~~--~-~~----~~~~~------g~~~~~s~~~~~~~advV   59 (292)
T PRK15059          1 MKLGFIG-LGIMGTPMAINLARAGH-------QLHVTTIGP--V-AD----ELLSL------GAVSVETARQVTEASDII   59 (292)
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCC-------eEEEEeCCH--h-HH----HHHHc------CCeecCCHHHHHhcCCEE
Confidence            3899999 79999999999998763       688999863  1 11    12211      112234566778999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        60 i~~v   63 (292)
T PRK15059         60 FIMV   63 (292)
T ss_pred             EEeC
Confidence            9984

>PLN02503 fatty acyl-CoA reductase 2

Probab=96.68  E-value=0.011  Score=59.92  Aligned_cols=111  Identities=20%  Similarity=0.166  Sum_probs=65.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhccc-CCCCCceEEEEEeCCCchhhh-hhhHHHHhhhh--------cC------Cccc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVM-LGTDQPVILHMLDIPPAAEAL-NGVKMELVDAA--------FP------LLKG   68 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~-~~~~~~~ei~L~D~~~~~~~l-~~~~~dl~~~~--------~~------~~~~   68 (332)
                      .++|.|+||+||+|++++..|+...- ..     +|.++.+..+.+.. +....++.+..        .+      ...+
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~-----kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K  193 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDVG-----KIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSK  193 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCCc-----EEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence            57999999999999999999886431 11     56777664321111 11101111100        00      0111


Q ss_pred             eEe-eCC-----------h-hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022           69 VVA-TTD-----------A-VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA  121 (332)
Q Consensus        69 ~~~-~~~-----------~-~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~  121 (332)
                      +.. ..|           . ....+++|+|||+|+... ...+.......|+...+++.+.+.+..
T Consensus       194 i~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~~  258 (605)
T PLN02503        194 LVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKCK  258 (605)
T ss_pred             EEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            211 111           1 223367999999988653 334566778889999999999887753

>PRK05599 hypothetical protein; Provisional

Probab=96.67  E-value=0.082  Score=47.19  Aligned_cols=153  Identities=14%  Similarity=0.199  Sum_probs=81.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE--eeC---------C
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV--ATT---------D   74 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~--~~~---------~   74 (332)
                      |.+.|+||++.+|.+++..|++ |.       .+.+.++++  +.++....++..........+.  ++.         .
T Consensus         1 ~~vlItGas~GIG~aia~~l~~-g~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~   70 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLCH-GE-------DVVLAARRP--EAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQ   70 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHhC-CC-------EEEEEeCCH--HHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHH
Confidence            3589999999999999999884 42       688998874  4555444444332100000011  100         1


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           75 AVEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      ..+.+...|++|+.+|......   .+.   .+....|.    ...+.+.+.+.+.. +.+.|+++|.-...        
T Consensus        71 ~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS~~~~--------  141 (246)
T PRK05599         71 TQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT-APAAIVAFSSIAGW--------  141 (246)
T ss_pred             HHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC-CCCEEEEEeccccc--------
Confidence            1222346899999999753211   111   12222232    33445556665543 23567777754331        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.|..-.++.+.--...+-+.++..++  +..|+
T Consensus       142 -~~~~~~~~Y~asKaa~~~~~~~la~el~--~~~I~  174 (246)
T PRK05599        142 -RARRANYVYGSTKAGLDAFCQGLADSLH--GSHVR  174 (246)
T ss_pred             -cCCcCCcchhhHHHHHHHHHHHHHHHhc--CCCce
Confidence             1112122455566555667777777764  34555

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.027  Score=51.30  Aligned_cols=115  Identities=19%  Similarity=0.206  Sum_probs=60.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeC--Chhhh-----
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATT--DAVEA-----   78 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~--~~~~a-----   78 (332)
                      .+.|+| +|.+|.+++..|. .|.       +|++.|+++  +.++....++.+..... .....++.  +...+     
T Consensus         4 ~~lItG-a~gIG~~la~~l~-~G~-------~Vv~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~   72 (275)
T PRK06940          4 VVVVIG-AGGIGQAIARRVG-AGK-------KVLLADYNE--ENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQ   72 (275)
T ss_pred             EEEEEC-CChHHHHHHHHHh-CCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHH
Confidence            567778 5899999999985 442       789999874  33332222332210000 00111110  11111     


Q ss_pred             -cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           79 -CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        79 -l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                       +...|++|+.||... ...+....+..|+...-.+.+.+...-.+...+++++..
T Consensus        73 ~~g~id~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~  127 (275)
T PRK06940         73 TLGPVTGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ  127 (275)
T ss_pred             hcCCCCEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence             246899999999753 223455667777766555555544432122334555543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.67  E-value=0.011  Score=48.72  Aligned_cols=76  Identities=14%  Similarity=0.119  Sum_probs=49.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.++|+|+| +|.+|..++..|...+ ..     ++.++|++.  ++++..+.++....    ... ...+..+.++++|
T Consensus        18 ~~~~i~iiG-~G~~g~~~a~~l~~~g-~~-----~v~v~~r~~--~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~D   83 (155)
T cd01065          18 KGKKVLILG-AGGAARAVAYALAELG-AA-----KIVIVNRTL--EKAKALAERFGELG----IAI-AYLDLEELLAEAD   83 (155)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCC-CC-----EEEEEcCCH--HHHHHHHHHHhhcc----cce-eecchhhccccCC
Confidence            357999999 5999999999998764 12     799999874  33333333222110    011 1235556689999


Q ss_pred             EEEEeCCCCC
Q 020022           84 IAVMVGGFPR   93 (332)
Q Consensus        84 iVi~~ag~~~   93 (332)
                      +||.+.....
T Consensus        84 vvi~~~~~~~   93 (155)
T cd01065          84 LIINTTPVGM   93 (155)
T ss_pred             EEEeCcCCCC
Confidence            9999876543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.66  E-value=0.0085  Score=51.73  Aligned_cols=76  Identities=18%  Similarity=0.201  Sum_probs=48.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-----CChhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-----TDAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-----~~~~~a   78 (332)
                      +.+++.|+||+|.+|..++..|+..+.       ++.+++++.  ++++....++.+..   ...+...     .+..++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-------~V~l~~R~~--~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~   94 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-------RVVLVGRDL--ERAQKAADSLRARF---GEGVGAVETSDDAARAAA   94 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHH
Confidence            347999999889999999999987652       689998873  44443333332111   1111111     123478


Q ss_pred             cCCCcEEEEeCCC
Q 020022           79 CTGVNIAVMVGGF   91 (332)
Q Consensus        79 l~~aDiVi~~ag~   91 (332)
                      ++++|+||.+...
T Consensus        95 ~~~~diVi~at~~  107 (194)
T cd01078          95 IKGADVVFAAGAA  107 (194)
T ss_pred             HhcCCEEEECCCC
Confidence            8999998886543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.64  E-value=0.023  Score=50.94  Aligned_cols=75  Identities=21%  Similarity=0.266  Sum_probs=44.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ++||+|.||+|.||+.++..+.+.+-+    . =+..+|..+. . .  ...|...........+.++.++.....++|+
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~----~-L~aa~~~~~~-~-~--~g~d~ge~~g~~~~gv~v~~~~~~~~~~~DV   72 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDL----E-LVAAFDRPGS-L-S--LGSDAGELAGLGLLGVPVTDDLLLVKADADV   72 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCc----e-EEEEEecCCc-c-c--cccchhhhccccccCceeecchhhcccCCCE
Confidence            579999999999999999999876421    1 1455666531 1 1  1122222221112233444556666788888


Q ss_pred             EEEe
Q 020022           85 AVMV   88 (332)
Q Consensus        85 Vi~~   88 (332)
                      +|=.
T Consensus        73 ~IDF   76 (266)
T COG0289          73 LIDF   76 (266)
T ss_pred             EEEC
Confidence            8754

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.64  E-value=0.015  Score=52.63  Aligned_cols=159  Identities=19%  Similarity=0.193  Sum_probs=78.8

Q ss_pred             CCC-CCcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-C--CccceEeeCC
Q 020022            1 MAK-EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-P--LLKGVVATTD   74 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~--~~~~~~~~~~   74 (332)
                      |.+ +.+.+.|+||++  .+|.+++..|++.|.       .|.+.+++.   +++....++..... .  ...++....+
T Consensus         1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~G~-------~vil~~r~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   70 (262)
T PRK07984          1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGA-------ELAFTYQND---KLKGRVEEFAAQLGSDIVLPCDVAEDAS   70 (262)
T ss_pred             CcccCCCEEEEeCCCCCccHHHHHHHHHHHCCC-------EEEEEecch---hHHHHHHHHHhccCCceEeecCCCCHHH
Confidence            544 336788999764  799999999998773       688888752   22222222322100 0  0001100001


Q ss_pred             h-------hhhcCCCcEEEEeCCCCCCC--------CCCHH---HHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           75 A-------VEACTGVNIAVMVGGFPRKE--------GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        75 ~-------~~al~~aDiVi~~ag~~~~~--------~~~r~---~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      .       .+.+...|++|+.||+....        +.+.+   ..+..|+...-.+.+.+...-.+.+.|+++|.-...
T Consensus        71 v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~  150 (262)
T PRK07984         71 IDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE  150 (262)
T ss_pred             HHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC
Confidence            1       11233579999999974311        12222   234556543323333322221123566666642210


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                               ...|....++.++.--..+-+.+|..+.  +.+|+
T Consensus       151 ---------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr  183 (262)
T PRK07984        151 ---------RAIPNYNVMGLAKASLEANVRYMANAMG--PEGVR  183 (262)
T ss_pred             ---------CCCCCcchhHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence                     1112112345556555677777887764  34565

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.019  Score=50.28  Aligned_cols=114  Identities=20%  Similarity=0.139  Sum_probs=62.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhh---hcC-
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVE---ACT-   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~---al~-   80 (332)
                      +++.|+||+|.+|++++..|+..|.       ++.++|++.  +.++    ++...... ...++....+..+   .+. 
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-------~v~~~~r~~--~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   68 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-------RVIATARDA--AALA----ALQALGAEALALDVADPASVAGLAWKLDG   68 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-------EEEEEECCH--HHHH----HHHhccceEEEecCCCHHHHHHHHHHhcC
Confidence            4799999999999999999987763       789999874  2222    11111000 0001111111111   133 


Q ss_pred             -CCcEEEEeCCCCCC---C--CCCH---HHHHHhhHHHHHHHHHHHHhhcC-CCeEEEEecC
Q 020022           81 -GVNIAVMVGGFPRK---E--GMER---KDVMSKNVSIYKAQASALEQHAA-PNCKVLVVAN  132 (332)
Q Consensus        81 -~aDiVi~~ag~~~~---~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~-~~~~viv~tN  132 (332)
                       ..|+||+++|....   +  ..+.   +..+..|+.....+.+.+.++-. ....+++++.
T Consensus        69 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS  130 (222)
T PRK06953         69 EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSS  130 (222)
T ss_pred             CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcC
Confidence             47999999987521   1  1132   34456777666666555544311 1234555553

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.60  E-value=0.024  Score=51.91  Aligned_cols=69  Identities=16%  Similarity=0.352  Sum_probs=44.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhhcCCccceEeeCC-hhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFPLLKGVVATTD-AVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~~~~~~~~~~~~~-~~~al~~   81 (332)
                      ..+||+|+| .|.||..++..|...|.       .+..++.+.+.+.++ +..+++.+.         .+.+ ..++.++
T Consensus         2 ~~~~v~IvG-~GliG~s~a~~l~~~g~-------~v~i~g~d~~~~~~~~a~~lgv~d~---------~~~~~~~~~~~~   64 (279)
T COG0287           2 ASMKVGIVG-LGLMGGSLARALKEAGL-------VVRIIGRDRSAATLKAALELGVIDE---------LTVAGLAEAAAE   64 (279)
T ss_pred             CCcEEEEEC-CchHHHHHHHHHHHcCC-------eEEEEeecCcHHHHHHHhhcCcccc---------cccchhhhhccc
Confidence            357999999 79999999999999875       455666554222221 111222221         1122 2677889


Q ss_pred             CcEEEEeC
Q 020022           82 VNIAVMVG   89 (332)
Q Consensus        82 aDiVi~~a   89 (332)
                      ||+||++.
T Consensus        65 aD~Vivav   72 (279)
T COG0287          65 ADLVIVAV   72 (279)
T ss_pred             CCEEEEec
Confidence            99999984

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.058  Score=48.48  Aligned_cols=153  Identities=16%  Similarity=0.069  Sum_probs=77.8

Q ss_pred             CcEEEEEcCCC-chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeCC------hh
Q 020022            5 PVRVLVTGAAG-QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATTD------AV   76 (332)
Q Consensus         5 ~~kI~IiGa~G-~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~~------~~   76 (332)
                      .+++.|+||+| .+|.+++..|+..|.       +|.+.|++.  +.++....++.... . ..++. ...|      ..
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~-------~V~~~~~~~--~~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~~~   85 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGA-------RVVISDIHE--RRLGETADELAAEL-G-LGRVEAVVCDVTSEAQVD   85 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHhc-C-CceEEEEEccCCCHHHHH
Confidence            46899999877 699999999998764       688888764  33433333332210 0 00111 1111      11


Q ss_pred             h-------hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           77 E-------ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        77 ~-------al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                      +       .+...|++|+.+|.....   ..+   ....+..|+...    +.+.+.+.+.. ....+++++.....   
T Consensus        86 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~~ss~~~~---  161 (262)
T PRK07831         86 ALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARG-HGGVIVNNASVLGW---  161 (262)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEeCchhhc---
Confidence            1       124679999999974311   112   223344455433    34444444332 13455555532211   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                            ...+..-.++.++.--..+-+.++..+.  +..|+
T Consensus       162 ------~~~~~~~~Y~~sKaal~~~~~~la~e~~--~~gI~  194 (262)
T PRK07831        162 ------RAQHGQAHYAAAKAGVMALTRCSALEAA--EYGVR  194 (262)
T ss_pred             ------CCCCCCcchHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence                  1112222445555544566666666543  34555

>PRK06720 hypothetical protein; Provisional

Probab=96.55  E-value=0.044  Score=46.33  Aligned_cols=36  Identities=22%  Similarity=0.205  Sum_probs=30.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +.+.+.|+||+|.+|..++..|+..|.       ++.+.|+++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-------~V~l~~r~~   50 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-------KVIVTDIDQ   50 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-------EEEEEECCH
Confidence            457899999989999999999998763       789999764

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.52  E-value=0.048  Score=45.17  Aligned_cols=121  Identities=21%  Similarity=0.203  Sum_probs=70.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC----------
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD----------   74 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~----------   74 (332)
                      +.+.|+||+|.+|..++..|+..+-      ..+.+++++++.+.+......+.... ....-+... ++          
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~------~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~   73 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGA------RVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEE   73 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTT------EEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCc------eEEEEeeecccccccccccccccccc-cccccccccccccccccccccc
Confidence            3688999999999999999998742      16888888722233332333333111 000000100 01          


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCC---C---CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           75 AVEACTGVNIAVMVGGFPRKEG---M---ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~---~---~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      ..+.....|++|+.+|......   .   .....+..|+.....+.+.+.. . +.+.++++|....
T Consensus        74 ~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~-~~g~iv~~sS~~~  138 (167)
T PF00106_consen   74 VIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-Q-GGGKIVNISSIAG  138 (167)
T ss_dssp             HHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-H-TTEEEEEEEEGGG
T ss_pred             cccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-c-cccceEEecchhh
Confidence            1123457899999999875221   1   1224556676666666666666 4 3567888876554

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=96.52  E-value=0.017  Score=54.05  Aligned_cols=65  Identities=12%  Similarity=0.007  Sum_probs=44.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| .|.+|.+++..|...|+       +++.++.+..  +....+.   ..      .+.. .+..+++++||+
T Consensus        17 gktIgIIG-~GsmG~AlA~~L~~sG~-------~Vvv~~r~~~--~s~~~A~---~~------G~~~-~s~~eaa~~ADV   76 (330)
T PRK05479         17 GKKVAIIG-YGSQGHAHALNLRDSGV-------DVVVGLREGS--KSWKKAE---AD------GFEV-LTVAEAAKWADV   76 (330)
T ss_pred             CCEEEEEe-eHHHHHHHHHHHHHCCC-------EEEEEECCch--hhHHHHH---HC------CCee-CCHHHHHhcCCE
Confidence            47999999 79999999999988764       6777766531  1111111   11      1112 267788999999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      |+++.
T Consensus        77 VvLaV   81 (330)
T PRK05479         77 IMILL   81 (330)
T ss_pred             EEEcC
Confidence            99984

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.52  E-value=0.012  Score=52.84  Aligned_cols=38  Identities=24%  Similarity=0.178  Sum_probs=31.0

Q ss_pred             CCCCCcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            1 MAKEPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         1 m~~~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      |+.+.++|.|+||+|  .+|.+++..|+..|.       ++.+.+++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~-------~vi~~~r~   40 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGI-------DIFFTYWS   40 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCC-------cEEEEcCC
Confidence            566667899999874  699999999998763       68888775

>PRK07574 formate dehydrogenase; Provisional

Probab=96.51  E-value=0.018  Score=55.15  Aligned_cols=66  Identities=18%  Similarity=0.197  Sum_probs=46.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.||+.++..|..-|+       +|..+|+...  . .    +.....     .+....++.+.++.||+
T Consensus       192 gktVGIvG-~G~IG~~vA~~l~~fG~-------~V~~~dr~~~--~-~----~~~~~~-----g~~~~~~l~ell~~aDv  251 (385)
T PRK07574        192 GMTVGIVG-AGRIGLAVLRRLKPFDV-------KLHYTDRHRL--P-E----EVEQEL-----GLTYHVSFDSLVSVCDV  251 (385)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCC--c-h----hhHhhc-----CceecCCHHHHhhcCCE
Confidence            37999999 79999999999987554       7999997631  0 1    111100     12223468889999999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |++..-
T Consensus       252 V~l~lP  257 (385)
T PRK07574        252 VTIHCP  257 (385)
T ss_pred             EEEcCC
Confidence            999854

>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases

Probab=96.51  E-value=0.017  Score=51.48  Aligned_cols=72  Identities=13%  Similarity=0.114  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 020022          250 SACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALA  327 (332)
Q Consensus       250 ~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~  327 (332)
                      .++++|    .+| .+.++.++|..+|. -++|.|.++.+||++ ++|+.++.. .+|++....+++.....-+-.++++
T Consensus       141 ~~i~~i----~~~-~~~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~-g~lP~~~~~li~~~~~~e~L~veAa  214 (232)
T PF11975_consen  141 AAIEAI----YND-KPKRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAV-GPLPPAIAGLIQQVKAYERLTVEAA  214 (232)
T ss_dssp             HHHHHH----HHS-SEEEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-S-B---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH----hcC-CCeEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            455544    456 78889999999997 789999999999998 999999776 7999999987776655554444444

It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.

>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1

Probab=96.51  E-value=0.0067  Score=55.23  Aligned_cols=119  Identities=15%  Similarity=0.248  Sum_probs=71.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc----ccCCCCCc-eEEEEEeCCCchhhhhhhHHHHhhhhcCCccce--EeeCChhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG----VMLGTDQP-VILHMLDIPPAAEALNGVKMELVDAAFPLLKGV--VATTDAVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~~-~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~--~~~~~~~~a   78 (332)
                      .||.|.| +|..|..++.+|...    |+ +..+. -.+.++|.+.   .+.....|+.+...++.+..  ....++.++
T Consensus        26 ~~iv~~G-AGsAg~gia~ll~~~~~~~G~-~~eeA~~~i~~vD~~G---ll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~  100 (279)
T cd05312          26 QRILFLG-AGSAGIGIADLIVSAMVREGL-SEEEARKKIWLVDSKG---LLTKDRKDLTPFKKPFARKDEEKEGKSLLEV  100 (279)
T ss_pred             cEEEEEC-cCHHHHHHHHHHHHHHHHcCC-ChhhccCeEEEEcCCC---eEeCCCCcchHHHHHHHhhcCcccCCCHHHH
Confidence            6999999 699999999888775    54 11111 1689999863   22111122222111111111  123579999


Q ss_pred             cC--CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc---chHHHHHHh
Q 020022           79 CT--GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN---TNALILKEF  144 (332)
Q Consensus        79 l~--~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~---~~~~~~~~~  144 (332)
                      ++  ++|++|=+.+.+   |-           +.+++.+.+.++| ++.+|.-.|||..   +...-+.+.
T Consensus       101 i~~v~ptvlIG~S~~~---g~-----------ft~evv~~Ma~~~-~~PIIFaLSNPt~~~E~~pe~a~~~  156 (279)
T cd05312         101 VKAVKPTVLIGLSGVG---GA-----------FTEEVVRAMAKSN-ERPIIFALSNPTSKAECTAEDAYKW  156 (279)
T ss_pred             HHhcCCCEEEEeCCCC---CC-----------CCHHHHHHHHhcC-CCCEEEECCCcCCccccCHHHHHHh
Confidence            99  889988765433   21           2347778888888 4677777899974   444444443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=96.50  E-value=0.015  Score=54.53  Aligned_cols=74  Identities=22%  Similarity=0.237  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ...+++||| +|.+|...+..+....-+.     +|.++|++.  ++++..+.++.+.    ...+....+..+++++||
T Consensus       127 ~~~~lgiiG-~G~qA~~~l~al~~~~~~~-----~v~V~~r~~--~~~~~~~~~~~~~----g~~v~~~~~~~eav~~aD  194 (325)
T TIGR02371       127 DSSVLGIIG-AGRQAWTQLEALSRVFDLE-----EVSVYCRTP--STREKFALRASDY----EVPVRAATDPREAVEGCD  194 (325)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEECCCH--HHHHHHHHHHHhh----CCcEEEeCCHHHHhccCC
Confidence            357999999 7999998666665432122     899999984  4554444444321    223556678899999999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +|+.+-
T Consensus       195 iVitaT  200 (325)
T TIGR02371       195 ILVTTT  200 (325)
T ss_pred             EEEEec
Confidence            999864

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.49  E-value=0.0091  Score=56.30  Aligned_cols=76  Identities=18%  Similarity=0.431  Sum_probs=49.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCce-EEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPV-ILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~-ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      |+.+.+||+|+||+|.+|..+...|....-+.    + ++.++.-..    -.|....+..      .++.+..-..+.+
T Consensus         1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~----v~~l~~~aS~~----saGk~~~~~~------~~l~v~~~~~~~~   66 (347)
T PRK06728          1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFN----IAEVTLLSSKR----SAGKTVQFKG------REIIIQEAKINSF   66 (347)
T ss_pred             CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCC----cccEEEEECcc----cCCCCeeeCC------cceEEEeCCHHHh
Confidence            77788999999999999999999988544332    2 477775432    2333332211      1333432234567


Q ss_pred             CCCcEEEEeCC
Q 020022           80 TGVNIAVMVGG   90 (332)
Q Consensus        80 ~~aDiVi~~ag   90 (332)
                      +++|+|+++++
T Consensus        67 ~~~Divf~a~~   77 (347)
T PRK06728         67 EGVDIAFFSAG   77 (347)
T ss_pred             cCCCEEEECCC
Confidence            89999999865

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.47  E-value=0.11  Score=47.49  Aligned_cols=116  Identities=18%  Similarity=0.182  Sum_probs=72.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh--hcCCccceEe-------eCChh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA--AFPLLKGVVA-------TTDAV   76 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~--~~~~~~~~~~-------~~~~~   76 (332)
                      ..|.|+||++.+|..+|..++..+-       .++|.|++..  -.+..+..+.+.  ...+..+++-       ....+
T Consensus        39 ~~vLITGgg~GlGr~ialefa~rg~-------~~vl~Din~~--~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   39 EIVLITGGGSGLGRLIALEFAKRGA-------KLVLWDINKQ--GNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHhCC-------eEEEEecccc--chHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHH
Confidence            5799999988999999999998763       6999999962  222233333321  0001001100       11245


Q ss_pred             hhcCCCcEEEEeCCCCC-CCC--CCHHHH---HHhh----HHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           77 EACTGVNIAVMVGGFPR-KEG--MERKDV---MSKN----VSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~-~~~--~~r~~~---~~~n----~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +...+.|++|..||+.. ++-  .+++++   +..|    ...++.+.+.+.+.+  ++.++.++.
T Consensus       110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~--~GHIV~IaS  173 (300)
T KOG1201|consen  110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN--NGHIVTIAS  173 (300)
T ss_pred             HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC--CceEEEehh
Confidence            66788999999999743 222  333322   2333    477899999999875  456666654

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=96.45  E-value=0.0086  Score=58.94  Aligned_cols=100  Identities=14%  Similarity=0.099  Sum_probs=58.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh---hhcCCCc
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV---EACTGVN   83 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~---~al~~aD   83 (332)
                      +|+||| .|.||.+++..|+..|.       +|.+||+++  ++.+.    +.+.... ...+....+..   ++++++|
T Consensus         1 ~IG~IG-LG~MG~~mA~nL~~~G~-------~V~v~drt~--~~~~~----l~~~~~~-g~~~~~~~s~~e~v~~l~~~d   65 (467)
T TIGR00873         1 DIGVIG-LAVMGSNLALNMADHGF-------TVSVYNRTP--EKTDE----FLAEHAK-GKKIVGAYSIEEFVQSLERPR   65 (467)
T ss_pred             CEEEEe-eHHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHH----HHhhccC-CCCceecCCHHHHHhhcCCCC
Confidence            489999 89999999999998763       799999974  33332    2211000 00122222333   3456799


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC--cccc
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN--PANT  136 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN--P~~~  136 (332)
                      +|+++.-    ++           +.+.++...+..+..++.+||..||  |.+.
T Consensus        66 vIil~v~----~~-----------~~v~~Vi~~l~~~L~~g~iIID~gns~~~~t  105 (467)
T TIGR00873        66 KIMLMVK----AG-----------APVDAVINQLLPLLEKGDIIIDGGNSHYPDT  105 (467)
T ss_pred             EEEEECC----Cc-----------HHHHHHHHHHHhhCCCCCEEEECCCcCHHHH
Confidence            8888742    11           2223333445444445667777876  5553

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.45  E-value=0.02  Score=50.61  Aligned_cols=118  Identities=15%  Similarity=0.116  Sum_probs=61.3

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhh-------
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVE-------   77 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~-------   77 (332)
                      |.|+||+|++|.+++..|+..|.       ++.+.++.. .+.+.....++.+.....   ..++.-..+..+       
T Consensus         1 vlItGas~giG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   72 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGF-------EICVHYHSG-RSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIA   72 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            57999999999999999998764       677776543 233332223332211000   000000001111       


Q ss_pred             hcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcc
Q 020022           78 ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPA  134 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~  134 (332)
                      .+...|.+|+.+|......   .+   ....+..|+.....+.+.+    .+.. +...++++|...
T Consensus        73 ~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~  138 (239)
T TIGR01831        73 EHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITLASVS  138 (239)
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEEcchh
Confidence            2335689999998753221   22   3345566766554444432    1222 335677776543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.45  E-value=0.016  Score=49.40  Aligned_cols=93  Identities=19%  Similarity=0.160  Sum_probs=57.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|+.++..+..-|+       +|..+|+....   . .  ...+..      + ...++.+.++.||+
T Consensus        36 g~tvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~---~-~--~~~~~~------~-~~~~l~ell~~aDi   94 (178)
T PF02826_consen   36 GKTVGIIG-YGRIGRAVARRLKAFGM-------RVIGYDRSPKP---E-E--GADEFG------V-EYVSLDELLAQADI   94 (178)
T ss_dssp             TSEEEEES-TSHHHHHHHHHHHHTT--------EEEEEESSCHH---H-H--HHHHTT------E-EESSHHHHHHH-SE
T ss_pred             CCEEEEEE-EcCCcCeEeeeeecCCc-------eeEEecccCCh---h-h--hccccc------c-eeeehhhhcchhhh
Confidence            47999999 79999999999987654       89999987421   1 1  111111      1 22468889999999


Q ss_pred             EEEeCCCCC-CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           85 AVMVGGFPR-KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        85 Vi~~ag~~~-~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      |++..-... ..+.       -|.       +.+.+ .++++++|+++--
T Consensus        95 v~~~~plt~~T~~l-------i~~-------~~l~~-mk~ga~lvN~aRG  129 (178)
T PF02826_consen   95 VSLHLPLTPETRGL-------INA-------EFLAK-MKPGAVLVNVARG  129 (178)
T ss_dssp             EEE-SSSSTTTTTS-------BSH-------HHHHT-STTTEEEEESSSG
T ss_pred             hhhhhcccccccee-------eee-------eeeec-cccceEEEeccch
Confidence            999864332 1121       111       12233 3578889888753

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.03  Score=57.44  Aligned_cols=117  Identities=17%  Similarity=0.118  Sum_probs=64.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhhc--
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEAC--   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~al--   79 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|.++++++  +.++....++.......   ..++.-..+..+++  
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  441 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGA-------TVFLVARNG--EALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKD  441 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            46899999999999999999998763       789999874  33333333332211000   00111011122222  


Q ss_pred             -----CCCcEEEEeCCCCCCCC--------CCHHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022           80 -----TGVNIAVMVGGFPRKEG--------MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        80 -----~~aDiVi~~ag~~~~~~--------~~r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                           ...|++|+.||......        .+....+..|+..    ++.+.+.+++..  .+.+|++|.
T Consensus       442 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~g~iv~isS  509 (657)
T PRK07201        442 ILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR--FGHVVNVSS  509 (657)
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--CCEEEEECC
Confidence                 36899999999743211        1122345566554    344455555443  346777764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.40  E-value=0.13  Score=45.21  Aligned_cols=118  Identities=16%  Similarity=0.180  Sum_probs=60.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeC---------Ch
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATT---------DA   75 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~---------~~   75 (332)
                      +.+.|+||+|++|+.++..|+..|.       ++++..+.. .+.++....++....... ......+.         ..
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-------RVAANCGPN-EERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKV   72 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence            3578999999999999999998763       567766521 222222112221110000 00000110         01


Q ss_pred             hhhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCc
Q 020022           76 VEACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      .+.+...|+||+.+|.....   ..+   ....+..|..-    .+.+.+.+++..  ...++++|..
T Consensus        73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~iss~  138 (242)
T TIGR01829        73 EAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG--WGRIINISSV  138 (242)
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEcch
Confidence            12235689999999875321   122   23344566654    334455554443  2456677643

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.031  Score=51.29  Aligned_cols=38  Identities=34%  Similarity=0.304  Sum_probs=31.0

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      |.. +.+.+.|+||++.+|.+++..|+..|.       .+.+.|++
T Consensus         1 m~~l~~k~~lITGas~GIG~aia~~la~~G~-------~vii~~~~   39 (286)
T PRK07791          1 MGLLDGRVVIVTGAGGGIGRAHALAFAAEGA-------RVVVNDIG   39 (286)
T ss_pred             CCccCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeeCC
Confidence            543 347899999999999999999998763       68888865

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.39  E-value=0.16  Score=46.13  Aligned_cols=151  Identities=15%  Similarity=0.140  Sum_probs=78.9

Q ss_pred             CcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcC--CccceEeeCC-----
Q 020022            5 PVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP--LLKGVVATTD-----   74 (332)
Q Consensus         5 ~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~--~~~~~~~~~~-----   74 (332)
                      .+.+.|+||++  .+|.+++..|+..|.       .|++.++++  +..+ ...++.+. ...  ...++....+     
T Consensus         7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga-------~V~~~~r~~--~~~~-~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~   76 (271)
T PRK06505          7 GKRGLIMGVANDHSIAWGIAKQLAAQGA-------ELAFTYQGE--ALGK-RVKPLAESLGSDFVLPCDVEDIASVDAVF   76 (271)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHhCCC-------EEEEecCch--HHHH-HHHHHHHhcCCceEEeCCCCCHHHHHHHH
Confidence            46788999765  899999999998874       688888763  1111 11222111 000  0001110000     


Q ss_pred             --hhhhcCCCcEEEEeCCCCCC-----C--CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           75 --AVEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~-----~--~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                        ..+.+...|++|+.||....     +  ..+.+   ..+..|+..    .+.+.+.+.    +.+.||++|.....  
T Consensus        77 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~----~~G~Iv~isS~~~~--  150 (271)
T PRK06505         77 EALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP----DGGSMLTLTYGGST--  150 (271)
T ss_pred             HHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc----cCceEEEEcCCCcc--
Confidence              11223568999999997532     1  12332   334455543    344444443    22456676643221  


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                             .+.|....++.++.--..+-+.+|..+.  +..|+
T Consensus       151 -------~~~~~~~~Y~asKaAl~~l~r~la~el~--~~gIr  183 (271)
T PRK06505        151 -------RVMPNYNVMGVAKAALEASVRYLAADYG--PQGIR  183 (271)
T ss_pred             -------ccCCccchhhhhHHHHHHHHHHHHHHHh--hcCeE
Confidence                   0122222456666666677777888764  44555

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.39  E-value=0.014  Score=55.07  Aligned_cols=64  Identities=13%  Similarity=-0.040  Sum_probs=45.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.||+.++..|...|+       +|..||+...  ..    .+....       .. ..++.+.+++||+
T Consensus       150 gktvgIiG-~G~IG~~vA~~l~~~G~-------~V~~~d~~~~--~~----~~~~~~-------~~-~~~l~ell~~aDi  207 (333)
T PRK13243        150 GKTIGIIG-FGRIGQAVARRAKGFGM-------RILYYSRTRK--PE----AEKELG-------AE-YRPLEELLRESDF  207 (333)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCCCC--hh----hHHHcC-------CE-ecCHHHHHhhCCE
Confidence            37999999 79999999999987654       7899998641  11    111111       11 2357788999999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |++..-
T Consensus       208 V~l~lP  213 (333)
T PRK13243        208 VSLHVP  213 (333)
T ss_pred             EEEeCC
Confidence            999853

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.37  E-value=0.066  Score=48.19  Aligned_cols=159  Identities=11%  Similarity=0.103  Sum_probs=78.0

Q ss_pred             CCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCC-chhhhhhhHHHHhhhhc-CCccceEeeCC-----
Q 020022            4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAAF-PLLKGVVATTD-----   74 (332)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-~~~~l~~~~~dl~~~~~-~~~~~~~~~~~-----   74 (332)
                      ..+.+.|+||+  +.+|.+++..|++.|.       ++.+.+++. .++.++....++..... ....++....+     
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   78 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-------KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACF   78 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHH
Confidence            34689999976  7999999999998774       688887642 11222222121110000 00001100001     


Q ss_pred             --hhhhcCCCcEEEEeCCCCCC-----C--CCCHHHH---HHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           75 --AVEACTGVNIAVMVGGFPRK-----E--GMERKDV---MSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~-----~--~~~r~~~---~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                        ..+.+...|++|+.+|....     +  ..+.+++   +..|......+.+.+..+-.+.+.||++|.-...      
T Consensus        79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~------  152 (257)
T PRK08594         79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE------  152 (257)
T ss_pred             HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc------
Confidence              11223557999999987431     1  1233322   3344443333333322221223567777743221      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.|..-.++.++.--..|-+.++..+.  +..|+
T Consensus       153 ---~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr  185 (257)
T PRK08594        153 ---RVVQNYNVMGVAKASLEASVKYLANDLG--KDGIR  185 (257)
T ss_pred             ---cCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCCE
Confidence               0112112355566655677777777664  34454

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=96.34  E-value=0.019  Score=53.34  Aligned_cols=75  Identities=7%  Similarity=-0.009  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ...+++|+| +|..|...+..++...-+.     +|+++|++.  ++.+..+.++.+.   ....+....+.++++++||
T Consensus       116 da~~l~iiG-aG~QA~~~~~a~~~v~~i~-----~v~v~~r~~--~~a~~f~~~~~~~---~~~~v~~~~~~~eav~~aD  184 (301)
T PRK06407        116 NVENFTIIG-SGFQAETQLEGMASVYNPK-----RIRVYSRNF--DHARAFAERFSKE---FGVDIRPVDNAEAALRDAD  184 (301)
T ss_pred             CCcEEEEEC-CcHHHHHHHHHHHhcCCCC-----EEEEECCCH--HHHHHHHHHHHHh---cCCcEEEeCCHHHHHhcCC
Confidence            457899999 7999987776666532122     899999984  5555555555432   1235666678899999999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +|+.+-
T Consensus       185 IV~taT  190 (301)
T PRK06407        185 TITSIT  190 (301)
T ss_pred             EEEEec
Confidence            998753

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.33  E-value=0.037  Score=47.03  Aligned_cols=33  Identities=30%  Similarity=0.565  Sum_probs=28.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ||+|+| +|.+|+.++..|+..|+ +     +++|+|.+.
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D~   33 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGV-G-----NLKLVDFDV   33 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCC-C-----eEEEEeCCE
Confidence            699999 69999999999999876 3     799999874

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.33  E-value=0.019  Score=53.60  Aligned_cols=92  Identities=14%  Similarity=0.143  Sum_probs=58.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.||+.++..|..-|+       ++..+|...  +...+    ....        ....++.+.+++||+
T Consensus       136 g~tvgIvG-~G~IG~~vA~~l~afG~-------~V~~~~~~~--~~~~~----~~~~--------~~~~~l~e~l~~aDv  193 (312)
T PRK15469        136 DFTIGILG-AGVLGSKVAQSLQTWGF-------PLRCWSRSR--KSWPG----VQSF--------AGREELSAFLSQTRV  193 (312)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCC--CCCCC----ceee--------cccccHHHHHhcCCE
Confidence            47999999 89999999999987654       789999753  11110    1000        012367899999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |+++.-..           ..+..++-  .+.+.+. +|++++|+++-
T Consensus       194 vv~~lPlt-----------~~T~~li~--~~~l~~m-k~ga~lIN~aR  227 (312)
T PRK15469        194 LINLLPNT-----------PETVGIIN--QQLLEQL-PDGAYLLNLAR  227 (312)
T ss_pred             EEECCCCC-----------HHHHHHhH--HHHHhcC-CCCcEEEECCC
Confidence            99985322           11222221  2334444 47888888873

>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e

Probab=96.32  E-value=0.0033  Score=56.48  Aligned_cols=120  Identities=16%  Similarity=0.232  Sum_probs=70.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc----ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG----VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a   78 (332)
                      .||.+.| +|..|..++.+|...    |+-.++-.-.+.|+|.+.   .+.....|+.+...++   ........++.++
T Consensus        26 ~riv~~G-AGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~G---ll~~~r~~l~~~~~~~a~~~~~~~~~~~L~ea  101 (255)
T PF03949_consen   26 QRIVFFG-AGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKG---LLTDDREDLNPHKKPFARKTNPEKDWGSLLEA  101 (255)
T ss_dssp             -EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTE---EEBTTTSSHSHHHHHHHBSSSTTT--SSHHHH
T ss_pred             cEEEEeC-CChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccc---eEeccCccCChhhhhhhccCcccccccCHHHH
Confidence            5999999 699999999988876    652000001699999863   2221223332222111   1111112578999


Q ss_pred             cCCC--cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc---chHHHHHHh
Q 020022           79 CTGV--NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN---TNALILKEF  144 (332)
Q Consensus        79 l~~a--DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~---~~~~~~~~~  144 (332)
                      ++++  |++|=+.|.+   |.           +.+++++.+.+++ ++.+|.-.|||..   +...-+.+.
T Consensus       102 v~~~kPtvLIG~S~~~---g~-----------ft~evv~~Ma~~~-erPIIF~LSNPt~~aE~~peda~~~  157 (255)
T PF03949_consen  102 VKGAKPTVLIGLSGQG---GA-----------FTEEVVRAMAKHN-ERPIIFPLSNPTPKAECTPEDAYEW  157 (255)
T ss_dssp             HHCH--SEEEECSSST---TS-----------S-HHHHHHCHHHS-SSEEEEE-SSSCGGSSS-HHHHHHT
T ss_pred             HHhcCCCEEEEecCCC---Cc-----------CCHHHHHHHhccC-CCCEEEECCCCCCcccCCHHHHHhh
Confidence            9999  9998876643   21           2447788888888 4677777899976   333444443

g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....

>PLN02712 arogenate dehydrogenase

Probab=96.32  E-value=0.035  Score=57.07  Aligned_cols=64  Identities=16%  Similarity=0.248  Sum_probs=43.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc-CCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-TGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al-~~aD   83 (332)
                      ++||+||| .|.||..++..|...|.       +|..+|++.  ...  .+.++         .+...++..+.+ ++||
T Consensus        52 ~~kIgIIG-~G~mG~slA~~L~~~G~-------~V~~~dr~~--~~~--~A~~~---------Gv~~~~d~~e~~~~~aD  110 (667)
T PLN02712         52 QLKIAIIG-FGNYGQFLAKTLISQGH-------TVLAHSRSD--HSL--AARSL---------GVSFFLDPHDLCERHPD  110 (667)
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHH--HHHHc---------CCEEeCCHHHHhhcCCC
Confidence            57999999 79999999999988763       788999863  111  11111         112234555534 5799


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +||++.
T Consensus       111 vViLav  116 (667)
T PLN02712        111 VILLCT  116 (667)
T ss_pred             EEEEcC
Confidence            999983

>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]

Probab=96.31  E-value=0.017  Score=52.99  Aligned_cols=82  Identities=21%  Similarity=0.237  Sum_probs=54.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH--------Hhhhhc-CCccceEeeCCh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME--------LVDAAF-PLLKGVVATTDA   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d--------l~~~~~-~~~~~~~~~~~~   75 (332)
                      ++|||-|| +|+||......++.     ++-.+++.++|++.  .+..+..-|        |.+.-. ....++.++++.
T Consensus         1 ~~kiccig-agyvggptcavia~-----kcp~i~vtvvd~s~--~ri~~wnsd~lpiyepgldevv~~crgknlffstdi   72 (481)
T KOG2666|consen    1 MVKICCIG-AGYVGGPTCAVIAL-----KCPDIEVTVVDISV--PRINAWNSDKLPIYEPGLDEVVKQCRGKNLFFSTDI   72 (481)
T ss_pred             CceEEEec-CcccCCcchheeee-----cCCceEEEEEecCc--hHhhcccCCCCcccCCCHHHHHHHhcCCceeeecch
Confidence            36999999 69999875544332     23356899999985  333322111        111111 234678889999


Q ss_pred             hhhcCCCcEEEEeCCCCCC
Q 020022           76 VEACTGVNIAVMVGGFPRK   94 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~   94 (332)
                      +.+++.||+|++....|.+
T Consensus        73 ekai~eadlvfisvntptk   91 (481)
T KOG2666|consen   73 EKAIKEADLVFISVNTPTK   91 (481)
T ss_pred             HHHhhhcceEEEEecCCcc
Confidence            9999999999998776654

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=96.28  E-value=0.02  Score=53.49  Aligned_cols=73  Identities=26%  Similarity=0.226  Sum_probs=48.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ...+++|+| +|..+..-+..++...-+.     +|+++|+++  ++++..+.++.+    ....+....+.++|+++||
T Consensus       127 ~~~~l~viG-aG~QA~~~~~a~~~~~~i~-----~v~v~~r~~--~~~~~~~~~~~~----~~~~v~~~~~~~~av~~aD  194 (313)
T PF02423_consen  127 DARTLGVIG-AGVQARWHLRALAAVRPIK-----EVRVYSRSP--ERAEAFAARLRD----LGVPVVAVDSAEEAVRGAD  194 (313)
T ss_dssp             T--EEEEE---SHHHHHHHHHHHHHS--S-----EEEEE-SSH--HHHHHHHHHHHC----CCTCEEEESSHHHHHTTSS
T ss_pred             CCceEEEEC-CCHHHHHHHHHHHHhCCce-----EEEEEccCh--hHHHHHHHhhcc----ccccceeccchhhhcccCC
Confidence            356899999 7999988776665522133     899999984  556555555554    2446667778999999999


Q ss_pred             EEEEe
Q 020022           84 IAVMV   88 (332)
Q Consensus        84 iVi~~   88 (332)
                      +|+.+
T Consensus       195 ii~ta  199 (313)
T PF02423_consen  195 IIVTA  199 (313)
T ss_dssp             EEEE-
T ss_pred             EEEEc
Confidence            98865

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>PRK08605 D-lactate dehydrogenase; Validated

Probab=96.28  E-value=0.0097  Score=56.02  Aligned_cols=64  Identities=25%  Similarity=0.297  Sum_probs=44.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+|+| .|.+|+.++..|+. + ++    .+|..+|.... ..       ....       +....++.+++++||+
T Consensus       146 g~~VgIIG-~G~IG~~vA~~L~~-~-~g----~~V~~~d~~~~-~~-------~~~~-------~~~~~~l~ell~~aDv  203 (332)
T PRK08605        146 DLKVAVIG-TGRIGLAVAKIFAK-G-YG----SDVVAYDPFPN-AK-------AATY-------VDYKDTIEEAVEGADI  203 (332)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHh-c-CC----CEEEEECCCcc-Hh-------HHhh-------ccccCCHHHHHHhCCE
Confidence            47999999 79999999999853 2 12    17889997641 10       1111       1123467889999999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |+++.-
T Consensus       204 Ivl~lP  209 (332)
T PRK08605        204 VTLHMP  209 (332)
T ss_pred             EEEeCC
Confidence            999863

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.26  E-value=0.25  Score=44.88  Aligned_cols=157  Identities=15%  Similarity=0.151  Sum_probs=79.8

Q ss_pred             CcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCc-hhhhhhhHHHHhhhhcCCccceEeeCC-------
Q 020022            5 PVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPA-AEALNGVKMELVDAAFPLLKGVVATTD-------   74 (332)
Q Consensus         5 ~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~-~~~l~~~~~dl~~~~~~~~~~~~~~~~-------   74 (332)
                      .+++.|+||+  +.+|.+++..|+..|.       .|++.++++. .+.++....++... .....++....+       
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~-------~V~l~~r~~~~~~~~~~l~~~~~~~-~~~~~Dl~~~~~v~~~~~~   81 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGA-------ELAFTYQGDALKKRVEPLAAELGAF-VAGHCDVTDEASIDAVFET   81 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCchHHHHHHHHHHHhcCCc-eEEecCCCCHHHHHHHHHH
Confidence            3678999975  6899999999998874       6788776421 11221111111100 000001100001       


Q ss_pred             hhhhcCCCcEEEEeCCCCCC-----C--CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           75 AVEACTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~-----~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      ..+.+...|++|+.||+...     +  ..+.   ...+..|+...-.+.+.+...-.+++.++++|.....        
T Consensus        82 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~--------  153 (272)
T PRK08159         82 LEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE--------  153 (272)
T ss_pred             HHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc--------
Confidence            11223467999999997531     1  1232   3345566644444444433322223566666642210        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       ...|....++.++.-...+-+.++..+.  +..|+
T Consensus       154 -~~~p~~~~Y~asKaal~~l~~~la~el~--~~gIr  186 (272)
T PRK08159        154 -KVMPHYNVMGVAKAALEASVKYLAVDLG--PKNIR  186 (272)
T ss_pred             -cCCCcchhhhhHHHHHHHHHHHHHHHhc--ccCeE
Confidence             1123222456666666677777777765  34555

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=96.25  E-value=0.028  Score=52.33  Aligned_cols=119  Identities=11%  Similarity=0.021  Sum_probs=64.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcc-cCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCCh-----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDA-----   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~-----   75 (332)
                      .+.+.|+||++.+|.+++..|+..| .       .|++.++++  +.++....++.......   ..++....+.     
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   73 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-------HVIMACRDF--LKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQ   73 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-------EEEEEeCCH--HHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHH
Confidence            4579999999999999999999876 3       688888774  33332222222100000   0000000011     


Q ss_pred             --hhhcCCCcEEEEeCCCCCC----CCCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           76 --VEACTGVNIAVMVGGFPRK----EGMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        76 --~~al~~aDiVi~~ag~~~~----~~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                        .+.....|++|+.||+...    +..+.+   ..+..|.    -+++.+.+.+++.....++||++|.
T Consensus        74 ~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS  143 (314)
T TIGR01289        74 QFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGS  143 (314)
T ss_pred             HHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEec
Confidence              1113468999999997422    122322   3345555    4466667777654211256777654

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=96.24  E-value=0.071  Score=49.42  Aligned_cols=107  Identities=20%  Similarity=0.124  Sum_probs=63.4

Q ss_pred             cEEEEEcCCCc--------------------hHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhhcC
Q 020022            6 VRVLVTGAAGQ--------------------IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFP   64 (332)
Q Consensus         6 ~kI~IiGa~G~--------------------vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~~~   64 (332)
                      |||+|-|| |+                    -|+++|..|+..|.       +++++|++.  +++. .....+.+.   
T Consensus         1 ~~~~~~g~-gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh-------eV~V~Drnr--sa~e~e~~e~Laea---   67 (341)
T TIGR01724         1 MKVSVYGA-GNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH-------DVVLAEPNR--EFMSDDLWKKVEDA---   67 (341)
T ss_pred             CeeEEecC-cchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC-------EEEEEeCCh--hhhhhhhhHHHHHC---
Confidence            58888884 64                    37889999988763       799999874  2221 122223332   


Q ss_pred             CccceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-CcccchHHHHHH
Q 020022           65 LLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANTNALILKE  143 (332)
Q Consensus        65 ~~~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~~~~~~~~  143 (332)
                         .....++..++.++||+||++-.               |-+.+++++..+....+++.++|..| -+.+.+.+.+..
T Consensus        68 ---GA~~AaS~aEAAa~ADVVIL~LP---------------d~aaV~eVl~GLaa~L~~GaIVID~STIsP~t~~~~~e~  129 (341)
T TIGR01724        68 ---GVKVVSDDKEAAKHGEIHVLFTP---------------FGKGTFSIARTIIEHVPENAVICNTCTVSPVVLYYSLEK  129 (341)
T ss_pred             ---CCeecCCHHHHHhCCCEEEEecC---------------CHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHH
Confidence               12344567899999999999842               22233333344545555666565553 344455555544

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.24  E-value=0.011  Score=53.42  Aligned_cols=69  Identities=12%  Similarity=0.105  Sum_probs=45.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.+|++++..|...+. .   ...+.++|+++  ++++    .+.+..    ..+....+..+++++||+|
T Consensus         1 m~IgiIG-~G~mG~aia~~L~~~g~-~---~~~i~v~~r~~--~~~~----~l~~~~----~~~~~~~~~~~~~~~aDvV   65 (258)
T PRK06476          1 MKIGFIG-TGAITEAMVTGLLTSPA-D---VSEIIVSPRNA--QIAA----RLAERF----PKVRIAKDNQAVVDRSDVV   65 (258)
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhCCC-C---hheEEEECCCH--HHHH----HHHHHc----CCceEeCCHHHHHHhCCEE
Confidence            4899999 79999999999987653 1   11467888763  3332    122110    0123445666778899999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        66 ilav   69 (258)
T PRK06476         66 FLAV   69 (258)
T ss_pred             EEEe
Confidence            9985

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.24  E-value=0.084  Score=47.58  Aligned_cols=155  Identities=11%  Similarity=0.138  Sum_probs=79.4

Q ss_pred             CcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcCCccceEeeC--C-----
Q 020022            5 PVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFPLLKGVVATT--D-----   74 (332)
Q Consensus         5 ~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~~~~~~~~~~--~-----   74 (332)
                      .+.+.|+||++  .+|.+++..|+..|.       .|.+.++++   .+.....++.+. .........++.  +     
T Consensus         8 ~k~~lITGas~~~GIG~a~a~~la~~G~-------~v~~~~r~~---~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~   77 (260)
T PRK06603          8 GKKGLITGIANNMSISWAIAQLAKKHGA-------ELWFTYQSE---VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLF   77 (260)
T ss_pred             CcEEEEECCCCCcchHHHHHHHHHHcCC-------EEEEEeCch---HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHH
Confidence            35788999875  699999999998764       688888752   111112222211 000000011110  1     


Q ss_pred             --hhhhcCCCcEEEEeCCCCCC-----C--CCCHH---HHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           75 --AVEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~-----~--~~~r~---~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                        ..+.+...|++|..+|....     +  ..+.+   ..+..|+...-.+.+.+...-.+.+.||+++.....      
T Consensus        78 ~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~------  151 (260)
T PRK06603         78 DDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE------  151 (260)
T ss_pred             HHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc------
Confidence              11224568999999886421     1  12322   334555544333333322222123567777753321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.|..-.++.++---..|-+.++..+.  +..|+
T Consensus       152 ---~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr  184 (260)
T PRK06603        152 ---KVIPNYNVMGVAKAALEASVKYLANDMG--ENNIR  184 (260)
T ss_pred             ---cCCCcccchhhHHHHHHHHHHHHHHHhh--hcCeE
Confidence               1122222456666666777778888765  34565

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=96.22  E-value=0.013  Score=56.15  Aligned_cols=36  Identities=22%  Similarity=0.333  Sum_probs=28.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      +++||+|+||+|.+|..+...|.....      .+|+++..+
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~------~el~~l~s~   72 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPD------FEITVMTAD   72 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCC------CeEEEEECh
Confidence            356999999999999999999887642      278887654

>PRK08291 ectoine utilization protein EutC; Validated

Probab=96.22  E-value=0.026  Score=53.06  Aligned_cols=74  Identities=19%  Similarity=0.176  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .++|+|+| +|..|...+..+.. .+ +.     ++.+++++.  ++++..+.++++.   +...+....+..+++++||
T Consensus       132 ~~~v~IiG-aG~~a~~~~~al~~~~~-~~-----~V~v~~R~~--~~a~~l~~~~~~~---~g~~v~~~~d~~~al~~aD  199 (330)
T PRK08291        132 ASRAAVIG-AGEQARLQLEALTLVRP-IR-----EVRVWARDA--AKAEAYAADLRAE---LGIPVTVARDVHEAVAGAD  199 (330)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCC-CC-----EEEEEcCCH--HHHHHHHHHHhhc---cCceEEEeCCHHHHHccCC
Confidence            46999999 69999887777764 33 22     799999874  5555554444321   1123445667889999999


Q ss_pred             EEEEeCC
Q 020022           84 IAVMVGG   90 (332)
Q Consensus        84 iVi~~ag   90 (332)
                      +||.+..
T Consensus       200 iVi~aT~  206 (330)
T PRK08291        200 IIVTTTP  206 (330)
T ss_pred             EEEEeeC
Confidence            9988743

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.076  Score=49.29  Aligned_cols=159  Identities=11%  Similarity=0.037  Sum_probs=81.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc--------hhhhhhhHHHHhhhhcC---CccceEeeC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--------AEALNGVKMELVDAAFP---LLKGVVATT   73 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~--------~~~l~~~~~dl~~~~~~---~~~~~~~~~   73 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|++.+++..        ++.+......+......   ...++....
T Consensus         8 ~k~~lITGgs~GIG~aia~~la~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~   80 (305)
T PRK08303          8 GKVALVAGATRGAGRGIAVELGAAGA-------TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPE   80 (305)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            46899999999999999999998764       6888888631        12222222222211100   000110001


Q ss_pred             Ch-------hhhcCCCcEEEEeC-CCCC-----CC--CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEec
Q 020022           74 DA-------VEACTGVNIAVMVG-GFPR-----KE--GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        74 ~~-------~~al~~aDiVi~~a-g~~~-----~~--~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      +.       .+.+...|++|+.+ |...     .+  ..+.+   +.+..|+    -..+.+.+.+.+..  .+.||++|
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~--~g~IV~is  158 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP--GGLVVEIT  158 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC--CcEEEEEC
Confidence            11       12234679999998 7421     11  12222   2233343    44556666665432  35677776


Q ss_pred             CcccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          132 NPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       132 NP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ......     . ..+.+..-.++.+..--..|-+.+|..++  +..|+
T Consensus       159 S~~~~~-----~-~~~~~~~~~Y~asKaal~~lt~~La~el~--~~gIr  199 (305)
T PRK08303        159 DGTAEY-----N-ATHYRLSVFYDLAKTSVNRLAFSLAHELA--PHGAT  199 (305)
T ss_pred             Cccccc-----c-CcCCCCcchhHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence            532100     0 00111111355566655677777887765  45665

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.21  E-value=0.012  Score=55.39  Aligned_cols=75  Identities=24%  Similarity=0.379  Sum_probs=44.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      |+ +++||+|+||+|.+|..++..|...+.  +  ..+++++.-.+    -.|..+.+..      ....+.....++++
T Consensus         1 m~-~~~~IaIvGATG~vG~eLlrlL~~~~h--P--~~~l~~v~s~~----~aG~~l~~~~------~~l~~~~~~~~~~~   65 (336)
T PRK05671          1 MS-QPLDIAVVGATGTVGEALVQILEERDF--P--VGTLHLLASSE----SAGHSVPFAG------KNLRVREVDSFDFS   65 (336)
T ss_pred             CC-CCCEEEEEccCCHHHHHHHHHHhhCCC--C--ceEEEEEECcc----cCCCeeccCC------cceEEeeCChHHhc
Confidence            64 347999999999999999999986431  1  12566664332    1222222211      12333222223468


Q ss_pred             CCcEEEEeCC
Q 020022           81 GVNIAVMVGG   90 (332)
Q Consensus        81 ~aDiVi~~ag   90 (332)
                      ++|+|+++.+
T Consensus        66 ~vD~vFla~p   75 (336)
T PRK05671         66 QVQLAFFAAG   75 (336)
T ss_pred             CCCEEEEcCC
Confidence            9999999854

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.18  E-value=0.0059  Score=54.23  Aligned_cols=70  Identities=17%  Similarity=0.303  Sum_probs=44.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC----Chhhh-cC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT----DAVEA-CT   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~----~~~~a-l~   80 (332)
                      |+++|+| +|.+|++++..|...|.       +++++|.++  ++++....|-.+.     .-+....    -+.+| +.
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~-------~Vv~Id~d~--~~~~~~~~~~~~~-----~~v~gd~t~~~~L~~agi~   65 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGH-------NVVLIDRDE--ERVEEFLADELDT-----HVVIGDATDEDVLEEAGID   65 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCC-------ceEEEEcCH--HHHHHHhhhhcce-----EEEEecCCCHHHHHhcCCC
Confidence            5899999 69999999999998763       799999984  3333211110011     1111111    23343 67


Q ss_pred             CCcEEEEeCC
Q 020022           81 GVNIAVMVGG   90 (332)
Q Consensus        81 ~aDiVi~~ag   90 (332)
                      ++|++|.+-|
T Consensus        66 ~aD~vva~t~   75 (225)
T COG0569          66 DADAVVAATG   75 (225)
T ss_pred             cCCEEEEeeC
Confidence            8999998854

>PLN03139 formate dehydrogenase; Provisional

Probab=96.16  E-value=0.035  Score=53.25  Aligned_cols=93  Identities=15%  Similarity=0.095  Sum_probs=57.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.||+.++..|..-|+       ++..||....  ..  ...  .+.      .+....++.+.+++||+
T Consensus       199 gktVGIVG-~G~IG~~vA~~L~afG~-------~V~~~d~~~~--~~--~~~--~~~------g~~~~~~l~ell~~sDv  258 (386)
T PLN03139        199 GKTVGTVG-AGRIGRLLLQRLKPFNC-------NLLYHDRLKM--DP--ELE--KET------GAKFEEDLDAMLPKCDV  258 (386)
T ss_pred             CCEEEEEe-ecHHHHHHHHHHHHCCC-------EEEEECCCCc--ch--hhH--hhc------CceecCCHHHHHhhCCE
Confidence            47999999 79999999999986553       7888997631  11  111  111      11223468888999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      |++..-..    .+...++  |       .+.+... +|++++|+++
T Consensus       259 V~l~lPlt----~~T~~li--~-------~~~l~~m-k~ga~lIN~a  291 (386)
T PLN03139        259 VVINTPLT----EKTRGMF--N-------KERIAKM-KKGVLIVNNA  291 (386)
T ss_pred             EEEeCCCC----HHHHHHh--C-------HHHHhhC-CCCeEEEECC
Confidence            99985322    1111222  2       1334444 4788888876

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.16  E-value=0.043  Score=48.08  Aligned_cols=90  Identities=18%  Similarity=0.263  Sum_probs=60.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+||| .|.+|..+...+..... +  .+ -+.+||.++  ++++    .+....   ...  ..++..+.+.+.|++
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~-~--~e-~v~v~D~~~--ek~~----~~~~~~---~~~--~~s~ide~~~~~Dlv   64 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRV-D--FE-LVAVYDRDE--EKAK----ELEASV---GRR--CVSDIDELIAEVDLV   64 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCc-c--ee-EEEEecCCH--HHHH----HHHhhc---CCC--ccccHHHHhhcccee
Confidence            5899999 79999999888765421 1  11 478899874  3332    222211   111  125677777999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEE
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL  128 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~vi  128 (332)
                      |.+|+                .+.+++++.++-+.+ .|.+|+
T Consensus        65 VEaAS----------------~~Av~e~~~~~L~~g-~d~iV~   90 (255)
T COG1712          65 VEAAS----------------PEAVREYVPKILKAG-IDVIVM   90 (255)
T ss_pred             eeeCC----------------HHHHHHHhHHHHhcC-CCEEEE
Confidence            99975                356889999999886 465443

>PRK06141 ornithine cyclodeaminase; Validated

Probab=96.15  E-value=0.03  Score=52.27  Aligned_cols=73  Identities=19%  Similarity=0.191  Sum_probs=49.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ...+|+|+| +|.+|...+..++. .+. .     +|.++++++  ++.+..+.++.+.    ..++....+.++++++|
T Consensus       124 ~~~~v~iiG-~G~~a~~~~~al~~~~~~-~-----~V~V~~Rs~--~~a~~~a~~~~~~----g~~~~~~~~~~~av~~a  190 (314)
T PRK06141        124 DASRLLVVG-TGRLASLLALAHASVRPI-K-----QVRVWGRDP--AKAEALAAELRAQ----GFDAEVVTDLEAAVRQA  190 (314)
T ss_pred             CCceEEEEC-CcHHHHHHHHHHHhcCCC-C-----EEEEEcCCH--HHHHHHHHHHHhc----CCceEEeCCHHHHHhcC
Confidence            357999999 79999998876554 332 2     799999874  5555444444321    11344556778899999


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+|+.+-
T Consensus       191 DIVi~aT  197 (314)
T PRK06141        191 DIISCAT  197 (314)
T ss_pred             CEEEEee
Confidence            9996653

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=96.15  E-value=0.046  Score=49.04  Aligned_cols=44  Identities=30%  Similarity=0.326  Sum_probs=31.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHh----cccCCCCCceEEEEEeCCCchhhhhhhHHHHh
Q 020022            7 RVLVTGAAGQIGYALVPMIAR----GVMLGTDQPVILHMLDIPPAAEALNGVKMELV   59 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~----~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~   59 (332)
                      .+.|+||++.+|.+++..|+.    .|.       .|.+.++++  +.++....++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~-------~V~~~~r~~--~~~~~~~~~l~   49 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGS-------VLVLSARND--EALRQLKAEIG   49 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCc-------EEEEEEcCH--HHHHHHHHHHH
Confidence            478999999999999999986    332       688998874  44444444443

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=96.15  E-value=0.18  Score=46.67  Aligned_cols=38  Identities=32%  Similarity=0.439  Sum_probs=27.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |+++||+||| +|++|..++..+....-+    + -..++|+++
T Consensus         2 m~klrVAIIG-tG~IGt~hm~~l~~~~~v----e-lvAVvdid~   39 (302)
T PRK08300          2 MSKLKVAIIG-SGNIGTDLMIKILRSEHL----E-PGAMVGIDP   39 (302)
T ss_pred             CCCCeEEEEc-CcHHHHHHHHHHhcCCCc----E-EEEEEeCCh
Confidence            4568999999 899999988877753211    1 256888875

>PRK08017 oxidoreductase; Provisional

Probab=96.15  E-value=0.23  Score=44.22  Aligned_cols=34  Identities=24%  Similarity=0.232  Sum_probs=29.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ++|.|+||+|++|.+++..|+..|.       ++.+++++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-------~v~~~~r~~   36 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-------RVLAACRKP   36 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            4799999999999999999998763       688888864

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=96.15  E-value=0.024  Score=52.18  Aligned_cols=60  Identities=23%  Similarity=0.399  Sum_probs=42.8

Q ss_pred             EEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEEeC
Q 020022           10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVG   89 (332)
Q Consensus        10 IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~~a   89 (332)
                      ||| .|.+|..++..|+..|.       ++.++|+++  ++.+    .+...      ....+.+..+++++||+||++.
T Consensus         1 ~IG-lG~mG~~mA~~L~~~G~-------~V~v~dr~~--~~~~----~l~~~------g~~~~~s~~~~~~~advVil~v   60 (288)
T TIGR01692         1 FIG-LGNMGGPMAANLLKAGH-------PVRVFDLFP--DAVE----EAVAA------GAQAAASPAEAAEGADRVITML   60 (288)
T ss_pred             CCc-ccHhHHHHHHHHHhCCC-------eEEEEeCCH--HHHH----HHHHc------CCeecCCHHHHHhcCCEEEEeC
Confidence            579 79999999999998763       799999874  3332    22221      1223446778899999999985

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PRK07589 ornithine cyclodeaminase; Validated

Probab=96.13  E-value=0.029  Score=53.02  Aligned_cols=73  Identities=19%  Similarity=0.196  Sum_probs=51.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ..+++||| +|..+...+..++.-.-+.     +|.++++++  ++.+..+.++.+.    ..++....+.++++++||+
T Consensus       129 a~~l~iiG-aG~QA~~~l~a~~~vr~i~-----~V~v~~r~~--~~a~~~~~~~~~~----~~~v~~~~~~~~av~~ADI  196 (346)
T PRK07589        129 SRTMALIG-NGAQSEFQALAFKALLGIE-----EIRLYDIDP--AATAKLARNLAGP----GLRIVACRSVAEAVEGADI  196 (346)
T ss_pred             CcEEEEEC-CcHHHHHHHHHHHHhCCce-----EEEEEeCCH--HHHHHHHHHHHhc----CCcEEEeCCHHHHHhcCCE
Confidence            57899999 7999887766655422122     899999984  5555555555431    2245666788999999999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      |+.+-
T Consensus       197 IvtaT  201 (346)
T PRK07589        197 ITTVT  201 (346)
T ss_pred             EEEec
Confidence            98864

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.13  E-value=0.021  Score=53.03  Aligned_cols=73  Identities=12%  Similarity=0.031  Sum_probs=50.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ...+|+|+| +|.+|...+..+.. .+. .     ++.++|+++  ++++..+..+.+.    ...+. ..+.++++.+|
T Consensus       124 ~~~~v~IiG-aG~qa~~~~~al~~~~~~-~-----~v~v~~r~~--~~a~~~a~~~~~~----~~~~~-~~~~~~av~~a  189 (304)
T PRK07340        124 PPGDLLLIG-TGVQARAHLEAFAAGLPV-R-----RVWVRGRTA--ASAAAFCAHARAL----GPTAE-PLDGEAIPEAV  189 (304)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHhCCC-C-----EEEEEcCCH--HHHHHHHHHHHhc----CCeeE-ECCHHHHhhcC
Confidence            357999999 79999998888865 332 2     799999984  5555555444321    11222 35678899999


Q ss_pred             cEEEEeCC
Q 020022           83 NIAVMVGG   90 (332)
Q Consensus        83 DiVi~~ag   90 (332)
                      |+||.+-.
T Consensus       190 DiVitaT~  197 (304)
T PRK07340        190 DLVVTATT  197 (304)
T ss_pred             CEEEEccC
Confidence            99998743

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.10  E-value=0.02  Score=55.69  Aligned_cols=72  Identities=21%  Similarity=0.231  Sum_probs=48.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ..+|+|+| +|.+|..++..|...|..      ++.++|++.  +++...+..+..       ......+..+++.++|+
T Consensus       180 ~~~VlViG-aG~iG~~~a~~L~~~G~~------~V~v~~rs~--~ra~~la~~~g~-------~~i~~~~l~~~l~~aDv  243 (417)
T TIGR01035       180 GKKALLIG-AGEMGELVAKHLLRKGVG------KILIANRTY--ERAEDLAKELGG-------EAVKFEDLEEYLAEADI  243 (417)
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCC------EEEEEeCCH--HHHHHHHHHcCC-------eEeeHHHHHHHHhhCCE
Confidence            46999999 699999999999876632      699999874  333322222211       11111356778899999


Q ss_pred             EEEeCCCC
Q 020022           85 AVMVGGFP   92 (332)
Q Consensus        85 Vi~~ag~~   92 (332)
                      ||.+.+.+
T Consensus       244 Vi~aT~s~  251 (417)
T TIGR01035       244 VISSTGAP  251 (417)
T ss_pred             EEECCCCC
Confidence            99986655

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.09  E-value=0.0037  Score=59.97  Aligned_cols=74  Identities=23%  Similarity=0.350  Sum_probs=44.0

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee----CChhhhcCCCc
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT----TDAVEACTGVN   83 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~----~~~~~al~~aD   83 (332)
                      |.|+|| |.+|+.++..|++..-..     ++++.|++.  ++++.....+..   .........    ..+.+.++++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~-----~v~va~r~~--~~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~~~~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFE-----EVTVADRNP--EKAERLAEKLLG---DRVEAVQVDVNDPESLAELLRGCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE------EEEEEESSH--HHHHHHHT--TT---TTEEEEE--TTTHHHHHHHHTTSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCC-----cEEEEECCH--HHHHHHHhhccc---cceeEEEEecCCHHHHHHHHhcCC
Confidence            789996 999999999999865322     799999984  444433222210   111111111    12566789999


Q ss_pred             EEEEeCCCC
Q 020022           84 IAVMVGGFP   92 (332)
Q Consensus        84 iVi~~ag~~   92 (332)
                      +||.++|..
T Consensus        70 vVin~~gp~   78 (386)
T PF03435_consen   70 VVINCAGPF   78 (386)
T ss_dssp             EEEE-SSGG
T ss_pred             EEEECCccc
Confidence            999998744

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.06  E-value=0.029  Score=52.63  Aligned_cols=74  Identities=14%  Similarity=0.092  Sum_probs=49.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ..+++|+| +|.+|...+..++...-+.     +|.++|+++  ++.+....++.+.   +..++....+.+++++++|+
T Consensus       127 ~~~v~iiG-aG~~a~~~~~al~~~~~~~-----~v~v~~r~~--~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~aDi  195 (325)
T PRK08618        127 AKTLCLIG-TGGQAKGQLEAVLAVRDIE-----RVRVYSRTF--EKAYAFAQEIQSK---FNTEIYVVNSADEAIEEADI  195 (325)
T ss_pred             CcEEEEEC-CcHHHHHHHHHHHhcCCcc-----EEEEECCCH--HHHHHHHHHHHHh---cCCcEEEeCCHHHHHhcCCE
Confidence            57899999 7999987776665321122     799999984  5555444444321   11234455677889999999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||.+-
T Consensus       196 Vi~aT  200 (325)
T PRK08618        196 IVTVT  200 (325)
T ss_pred             EEEcc
Confidence            98874

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.06  E-value=0.32  Score=43.75  Aligned_cols=156  Identities=14%  Similarity=0.186  Sum_probs=77.9

Q ss_pred             CCC-CCcEEEEEcC--CCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh--h-cCCccceEeeCC
Q 020022            1 MAK-EPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA--A-FPLLKGVVATTD   74 (332)
Q Consensus         1 m~~-~~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~--~-~~~~~~~~~~~~   74 (332)
                      |.. +.+.+.|+||  ++.+|.+++..|+..|.       .+.+.++++   +......++...  . .....++.-..+
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   70 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGA-------ELAFTYVVD---KLEERVRKMAAELDSELVFRCDVASDDE   70 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCcH---HHHHHHHHHHhccCCceEEECCCCCHHH
Confidence            544 3468999996  56899999999998774       677776542   111112222111  0 000001111111


Q ss_pred             -------hhhhcCCCcEEEEeCCCCCCC--------CCCHHHH---HHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022           75 -------AVEACTGVNIAVMVGGFPRKE--------GMERKDV---MSKNVSI----YKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        75 -------~~~al~~aDiVi~~ag~~~~~--------~~~r~~~---~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                             ..+.+...|++|+.||.....        ..+.+++   +..|+..    .+.+.+.+++.  + +.|+++|.
T Consensus        71 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~-g~Iv~iss  147 (261)
T PRK08690         71 INQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--N-SAIVALSY  147 (261)
T ss_pred             HHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--C-cEEEEEcc
Confidence                   112234689999999985321        1222222   3445432    34444444322  2 45667764


Q ss_pred             cccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          133 PANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       133 P~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ....         .+.|..-.++.++---..+-+.+|..+.  +..|+
T Consensus       148 ~~~~---------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gIr  184 (261)
T PRK08690        148 LGAV---------RAIPNYNVMGMAKASLEAGIRFTAACLG--KEGIR  184 (261)
T ss_pred             cccc---------cCCCCcccchhHHHHHHHHHHHHHHHhh--hcCeE
Confidence            3321         1122222455555555566677776654  44565

>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme

Probab=96.04  E-value=0.019  Score=51.60  Aligned_cols=120  Identities=14%  Similarity=0.132  Sum_probs=71.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccC---CCCC-ceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVML---GTDQ-PVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~---~~~~-~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~a   78 (332)
                      .||.|.| +|..|..++.+|...+.-   +.++ .-.+.++|...   .+....-|+.....+   +.+.-....++.++
T Consensus        26 ~riv~~G-AGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~G---ll~~~r~~l~~~~~~~~~~~~~~~~~~~L~ea  101 (254)
T cd00762          26 HKVLFNG-AGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKG---LLVKNRKETCPNEYHLARFANPERESGDLEDA  101 (254)
T ss_pred             cEEEEEC-cCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCC---eEeCCCCccCHHHHHHHHHcCcccccCCHHHH
Confidence            6999999 699999999988775432   1000 01589999763   121111111111001   11111123579999


Q ss_pred             cC--CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc---chHHHHHHh
Q 020022           79 CT--GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN---TNALILKEF  144 (332)
Q Consensus        79 l~--~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~---~~~~~~~~~  144 (332)
                      ++  ++|++|=+.+.+   |           -+.+++.+.+.++| ++.+|.-.|||..   +...-+.+.
T Consensus       102 v~~~kptvlIG~S~~~---g-----------~ft~evv~~Ma~~~-~~PIIFaLSNPt~~aE~tpe~a~~~  157 (254)
T cd00762         102 VEAAKPDFLIGVSRVG---G-----------AFTPEVIRAXAEIN-ERPVIFALSNPTSKAECTAEEAYTA  157 (254)
T ss_pred             HHhhCCCEEEEeCCCC---C-----------CCCHHHHHHHhhcC-CCCEEEECCCcCCccccCHHHHHhh
Confidence            99  999998776544   2           12347778888888 4567777899974   444555554

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.04  E-value=0.045  Score=47.72  Aligned_cols=71  Identities=8%  Similarity=0.045  Sum_probs=43.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..+||.|+| +|.+|...+..|+..|.       +|++++.+..    + ...++.+..   .-......-.++.+.++|
T Consensus         9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga-------~V~VIs~~~~----~-~l~~l~~~~---~i~~~~~~~~~~~l~~ad   72 (202)
T PRK06718          9 SNKRVVIVG-GGKVAGRRAITLLKYGA-------HIVVISPELT----E-NLVKLVEEG---KIRWKQKEFEPSDIVDAF   72 (202)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEcCCCC----H-HHHHHHhCC---CEEEEecCCChhhcCCce
Confidence            357999999 69999999999988762       6888875421    1 112222111   001111122345689999


Q ss_pred             EEEEeCC
Q 020022           84 IAVMVGG   90 (332)
Q Consensus        84 iVi~~ag   90 (332)
                      +||.+-+
T Consensus        73 lViaaT~   79 (202)
T PRK06718         73 LVIAATN   79 (202)
T ss_pred             EEEEcCC
Confidence            9888743

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.022  Score=50.01  Aligned_cols=112  Identities=15%  Similarity=0.099  Sum_probs=60.2

Q ss_pred             EEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cC-CccceEeeCChhhhc---CCCc
Q 020022            9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEAC---TGVN   83 (332)
Q Consensus         9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~-~~~~~~~~~~~~~al---~~aD   83 (332)
                      .|+||+|++|+.++..|++.|.       ++.+.++++  +.+.....++.... .. ...++....+..+++   ...|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id   71 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGA-------RVTIASRSR--DRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFD   71 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence            3899999999999999998764       789999874  33332222232100 00 000111111122223   3479


Q ss_pred             EEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           84 IAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        84 iVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      ++|+.+|.....   ..+   ....+..|+.....+.+ +.... +...+++++
T Consensus        72 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~-~~~~~-~~g~iv~~s  123 (230)
T PRK07041         72 HVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR-AARIA-PGGSLTFVS  123 (230)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh-hhhhc-CCeEEEEEC
Confidence            999999874321   112   23445666665555555 22332 335566554

>PLN02928 oxidoreductase family protein

Probab=96.02  E-value=0.022  Score=53.91  Aligned_cols=104  Identities=15%  Similarity=0.138  Sum_probs=58.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~aD   83 (332)
                      .++|+|+| .|.||+.++..|..-|+       +|..+|+....+..  ....+..... ..........++.+.++.||
T Consensus       159 gktvGIiG-~G~IG~~vA~~l~afG~-------~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~~aD  228 (347)
T PLN02928        159 GKTVFILG-YGAIGIELAKRLRPFGV-------KLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAGEAD  228 (347)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHhhCCC-------EEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHhhCC
Confidence            37999999 79999999999987654       78999975311100  0000000000 00000001246889999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +|++..-...   .+ ..++  |       .+.+.+. +|++++|+++-
T Consensus       229 iVvl~lPlt~---~T-~~li--~-------~~~l~~M-k~ga~lINvaR  263 (347)
T PLN02928        229 IVVLCCTLTK---ET-AGIV--N-------DEFLSSM-KKGALLVNIAR  263 (347)
T ss_pred             EEEECCCCCh---Hh-hccc--C-------HHHHhcC-CCCeEEEECCC
Confidence            9999864321   11 1111  1       2333444 47888888874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.00  E-value=0.16  Score=44.02  Aligned_cols=120  Identities=18%  Similarity=0.191  Sum_probs=73.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-------eC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-------TT   73 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-------~~   73 (332)
                      |+.....|.|+||+..+|..+|..+.+.|-       ++....+++  ++|........... .....+..       ..
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN-------~VIi~gR~e--~~L~e~~~~~p~~~-t~v~Dv~d~~~~~~lve   70 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGN-------TVIICGRNE--ERLAEAKAENPEIH-TEVCDVADRDSRRELVE   70 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCC-------EEEEecCcH--HHHHHHHhcCcchh-eeeecccchhhHHHHHH
Confidence            666677999999999999999999998753       788888874  55542211111100 00000000       01


Q ss_pred             ChhhhcCCCcEEEEeCCCCCCCCCC-----H---HHHH----HhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           74 DAVEACTGVNIAVMVGGFPRKEGME-----R---KDVM----SKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        74 ~~~~al~~aDiVi~~ag~~~~~~~~-----r---~~~~----~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      -..+...+-+++|..||+.+..+.+     .   ++..    ..-+.....+.+.+.+.  |.+.||++|.
T Consensus        71 wLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q--~~a~IInVSS  139 (245)
T COG3967          71 WLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ--PEATIINVSS  139 (245)
T ss_pred             HHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC--CCceEEEecc
Confidence            1234456789999999998755422     1   1122    23346677778888764  4688899884

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.99  E-value=0.034  Score=48.51  Aligned_cols=34  Identities=26%  Similarity=0.410  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ..||+|+| .|.+|+.++..|+..|+ +     +++|+|.+
T Consensus        21 ~~~VlviG-~GglGs~ia~~La~~Gv-~-----~i~lvD~d   54 (202)
T TIGR02356        21 NSHVLIIG-AGGLGSPAALYLAGAGV-G-----TIVIVDDD   54 (202)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEecCC
Confidence            46999999 79999999999999885 4     79999976

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK06823 ornithine cyclodeaminase; Validated

Probab=95.99  E-value=0.043  Score=51.24  Aligned_cols=74  Identities=16%  Similarity=0.062  Sum_probs=51.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ...+++|+| +|..+...+..++...-+.     +|+++|+++  ++.+..+..+.+.    ..++....+.++++++||
T Consensus       127 d~~~l~iiG-~G~qA~~~~~a~~~v~~i~-----~v~v~~r~~--~~a~~~~~~~~~~----~~~v~~~~~~~~av~~AD  194 (315)
T PRK06823        127 HVSAIGIVG-TGIQARMQLMYLKNVTDCR-----QLWVWGRSE--TALEEYRQYAQAL----GFAVNTTLDAAEVAHAAN  194 (315)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhcCCCC-----EEEEECCCH--HHHHHHHHHHHhc----CCcEEEECCHHHHhcCCC
Confidence            357999999 7999988777766532122     899999984  5554444333321    234555677889999999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +|+.+-
T Consensus       195 IV~taT  200 (315)
T PRK06823        195 LIVTTT  200 (315)
T ss_pred             EEEEec
Confidence            998764

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.97  E-value=0.15  Score=45.79  Aligned_cols=36  Identities=22%  Similarity=0.235  Sum_probs=27.6

Q ss_pred             CCC-CCcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEe
Q 020022            1 MAK-EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLD   43 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D   43 (332)
                      |.. +.++|.|+||+|  .+|.+++..|+..|.       ++.+.+
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~-------~vi~~~   39 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGA-------DIFFTY   39 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCC-------eEEEEe
Confidence            543 347899999874  799999999998763       566664

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.96  E-value=0.073  Score=46.77  Aligned_cols=34  Identities=29%  Similarity=0.527  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ..||+|+| +|.+|+.++..|+..|+ +     +++|+|.+
T Consensus        28 ~~~V~ViG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D   61 (212)
T PRK08644         28 KAKVGIAG-AGGLGSNIAVALARSGV-G-----NLKLVDFD   61 (212)
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence            46899999 69999999999999886 3     79999987

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.95  E-value=0.12  Score=46.52  Aligned_cols=157  Identities=17%  Similarity=0.216  Sum_probs=77.5

Q ss_pred             CCC-CCcEEEEEcC--CCchHHHHHHHHHhcccCCCCCceEEEEEeCCC-chhhhhhhHHHHhhhhcCCccceEeeCCh-
Q 020022            1 MAK-EPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAAFPLLKGVVATTDA-   75 (332)
Q Consensus         1 m~~-~~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-~~~~l~~~~~dl~~~~~~~~~~~~~~~~~-   75 (332)
                      |+. ..+++.|+||  ++.+|.+++..|+..|.       ++.+.++.. +.+.++....++... .....++....+. 
T Consensus         1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~   72 (260)
T PRK06997          1 MGFLAGKRILITGLLSNRSIAYGIAKACKREGA-------ELAFTYVGDRFKDRITEFAAEFGSD-LVFPCDVASDEQID   72 (260)
T ss_pred             CCccCCcEEEEeCCCCCCcHHHHHHHHHHHCCC-------eEEEEccchHHHHHHHHHHHhcCCc-ceeeccCCCHHHHH
Confidence            443 3467999996  46899999999998774       677776431 112222111111100 0000011100111 


Q ss_pred             ------hhhcCCCcEEEEeCCCCCCC--------CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           76 ------VEACTGVNIAVMVGGFPRKE--------GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        76 ------~~al~~aDiVi~~ag~~~~~--------~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                            .+.+...|++|+.||.....        ..+.+   ..+..|+.    ..+.+.+.+.    +.+.++++|.-.
T Consensus        73 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~----~~g~Ii~iss~~  148 (260)
T PRK06997         73 ALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS----DDASLLTLSYLG  148 (260)
T ss_pred             HHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC----CCceEEEEeccc
Confidence                  12235689999999975321        12322   23445554    3444444442    234566666422


Q ss_pred             cchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          135 NTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..         .+.|..-.++.++---..+-+.+|..+.  +..|+
T Consensus       149 ~~---------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr  183 (260)
T PRK06997        149 AE---------RVVPNYNTMGLAKASLEASVRYLAVSLG--PKGIR  183 (260)
T ss_pred             cc---------cCCCCcchHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence            11         1112112345555555667777777764  34565

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.94  E-value=0.05  Score=51.38  Aligned_cols=35  Identities=31%  Similarity=0.474  Sum_probs=30.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..||+|+| +|.+|+.++..|+..|+ +     +|.|+|.+.
T Consensus        24 ~~~VlVvG-~GglGs~va~~La~aGv-g-----~i~lvD~D~   58 (339)
T PRK07688         24 EKHVLIIG-AGALGTANAEMLVRAGV-G-----KVTIVDRDY   58 (339)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEEeCCc
Confidence            46999999 69999999999999886 4     799999863

>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]

Probab=95.94  E-value=0.026  Score=51.15  Aligned_cols=95  Identities=20%  Similarity=0.245  Sum_probs=60.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ++||++|| +|+||++++..|+..+...   +-+|...|+++  +++.    ++... ++.  .  .+++..++...+|+
T Consensus         1 ~~~IgfIG-~G~Mg~Ai~~gl~~~g~~~---~~~I~v~~~~~--e~~~----~l~~~-~g~--~--~~~~~~~~~~~adv   65 (266)
T COG0345           1 MMKIGFIG-AGNMGEAILSGLLKSGALP---PEEIIVTNRSE--EKRA----ALAAE-YGV--V--TTTDNQEAVEEADV   65 (266)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHhcCCCC---cceEEEeCCCH--HHHH----HHHHH-cCC--c--ccCcHHHHHhhCCE
Confidence            46899999 6999999999999887332   22688888774  3322    22221 111  1  15566788899999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      ||++.    ||            ..+.++...++.. .++..||-+.
T Consensus        66 v~Lav----KP------------q~~~~vl~~l~~~-~~~~lvISia   95 (266)
T COG0345          66 VFLAV----KP------------QDLEEVLSKLKPL-TKDKLVISIA   95 (266)
T ss_pred             EEEEe----Ch------------HhHHHHHHHhhcc-cCCCEEEEEe
Confidence            99984    33            2244666666652 3454444443

>PLN02712 arogenate dehydrogenase

Probab=95.93  E-value=0.085  Score=54.32  Aligned_cols=65  Identities=14%  Similarity=0.223  Sum_probs=44.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC-CC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-GV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~-~a   82 (332)
                      +++||+||| .|.||..++..|...|.       +|..+|++.  . .+ .+.++  .       +...++..+.+. ++
T Consensus       368 ~~~kIgIIG-lG~mG~slA~~L~~~G~-------~V~~~dr~~--~-~~-~a~~~--G-------v~~~~~~~el~~~~a  426 (667)
T PLN02712        368 SKLKIAIVG-FGNFGQFLAKTMVKQGH-------TVLAYSRSD--Y-SD-EAQKL--G-------VSYFSDADDLCEEHP  426 (667)
T ss_pred             CCCEEEEEe-cCHHHHHHHHHHHHCcC-------EEEEEECCh--H-HH-HHHHc--C-------CeEeCCHHHHHhcCC
Confidence            458999999 79999999999987652       789999873  1 11 11111  1       123345556554 58


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+||++.
T Consensus       427 DvVILav  433 (667)
T PLN02712        427 EVILLCT  433 (667)
T ss_pred             CEEEECC
Confidence            9999984

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.92  E-value=0.026  Score=53.47  Aligned_cols=35  Identities=23%  Similarity=0.341  Sum_probs=27.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI   44 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~   44 (332)
                      +++||+|+||+|++|+.++..|...+.      .+++++..
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~------~el~~~~~   36 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPW------FEVTALAA   36 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEEc
Confidence            468999999999999999998886432      26777743

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.91  E-value=0.034  Score=51.44  Aligned_cols=67  Identities=16%  Similarity=0.127  Sum_probs=45.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ..||+|+| .|.+|..++..|...|.       ++..+|+++  +..+ .+.++   ..    ......+..+.++++|+
T Consensus       152 g~kvlViG-~G~iG~~~a~~L~~~Ga-------~V~v~~r~~--~~~~-~~~~~---G~----~~~~~~~l~~~l~~aDi  213 (296)
T PRK08306        152 GSNVLVLG-FGRTGMTLARTLKALGA-------NVTVGARKS--AHLA-RITEM---GL----SPFHLSELAEEVGKIDI  213 (296)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHH-HHHHc---CC----eeecHHHHHHHhCCCCE
Confidence            57999999 69999999999987663       799999874  2211 11111   10    11111346678899999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||.+.
T Consensus       214 VI~t~  218 (296)
T PRK08306        214 IFNTI  218 (296)
T ss_pred             EEECC
Confidence            99985

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=95.91  E-value=0.041  Score=51.64  Aligned_cols=73  Identities=19%  Similarity=0.181  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..+++|+| +|..|...+..|+. .++ .     ++.+++++.  ++++..+.++.+.   ...++....+.++++++||
T Consensus       129 ~~~v~iiG-aG~qA~~~~~al~~~~~i-~-----~v~V~~R~~--~~a~~~a~~~~~~---~g~~v~~~~~~~~av~~aD  196 (326)
T TIGR02992       129 SSVVAIFG-AGMQARLQLEALTLVRDI-R-----SARIWARDS--AKAEALALQLSSL---LGIDVTAATDPRAAMSGAD  196 (326)
T ss_pred             CcEEEEEC-CCHHHHHHHHHHHHhCCc-c-----EEEEECCCH--HHHHHHHHHHHhh---cCceEEEeCCHHHHhccCC
Confidence            46899999 69999888888764 332 2     799999984  5555554444321   1123444567888999999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +||.+-
T Consensus       197 iVvtaT  202 (326)
T TIGR02992       197 IIVTTT  202 (326)
T ss_pred             EEEEec
Confidence            999874

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=95.91  E-value=0.067  Score=50.74  Aligned_cols=72  Identities=13%  Similarity=0.143  Sum_probs=44.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-ChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-~~~~al~~aDi   84 (332)
                      +||+|+||+|.||+.+...|....-|.   ..+++++....    ..+....+..      ....+.. +..++++++|+
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp---~~~~~~~ss~~----s~g~~~~f~~------~~~~v~~~~~~~~~~~vDi   67 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFD---AIRPVFFSTSQ----LGQAAPSFGG------TTGTLQDAFDIDALKALDI   67 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCc---cccEEEEEchh----hCCCcCCCCC------CcceEEcCcccccccCCCE
Confidence            489999999999999999888443332   12678886532    2222222211      1222222 22247899999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      +++++|
T Consensus        68 vffa~g   73 (366)
T TIGR01745        68 IITCQG   73 (366)
T ss_pred             EEEcCC
Confidence            999876

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.89  E-value=0.033  Score=51.31  Aligned_cols=67  Identities=12%  Similarity=0.125  Sum_probs=45.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+|+| .|.+|..++..|...|.       +|.++|+++  +.+. .   ......   ..+ ...++.+.++++|+
T Consensus       151 gk~v~IiG-~G~iG~avA~~L~~~G~-------~V~v~~R~~--~~~~-~---~~~~g~---~~~-~~~~l~~~l~~aDi  212 (287)
T TIGR02853       151 GSNVMVLG-FGRTGMTIARTFSALGA-------RVFVGARSS--ADLA-R---ITEMGL---IPF-PLNKLEEKVAEIDI  212 (287)
T ss_pred             CCEEEEEc-ChHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHH-H---HHHCCC---eee-cHHHHHHHhccCCE
Confidence            46999999 69999999999987663       799999874  2221 1   111100   011 11245677899999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||.+.
T Consensus       213 Vint~  217 (287)
T TIGR02853       213 VINTI  217 (287)
T ss_pred             EEECC
Confidence            99985

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.84  E-value=0.075  Score=50.16  Aligned_cols=35  Identities=31%  Similarity=0.431  Sum_probs=30.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..||+|+| +|.+|+.++..|+..|+ +     +|+|+|.+.
T Consensus        24 ~~~VlIiG-~GglGs~va~~La~aGv-g-----~i~lvD~D~   58 (338)
T PRK12475         24 EKHVLIVG-AGALGAANAEALVRAGI-G-----KLTIADRDY   58 (338)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCC-C-----EEEEEcCCc
Confidence            46899999 69999999999999885 4     799999874

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.82  E-value=0.027  Score=51.04  Aligned_cols=67  Identities=22%  Similarity=0.331  Sum_probs=42.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ++||+|+|++|.||+.++..+...+-      .+ +.++|.++  +.....    ..      ..+..+++..+.++++|
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~------~elvav~d~~~--~~~~~~----~~------~~i~~~~dl~~ll~~~D   62 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAED------LELVAAVDRPG--SPLVGQ----GA------LGVAITDDLEAVLADAD   62 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCC--cccccc----CC------CCccccCCHHHhccCCC
Confidence            46999999669999999987765321      13 45588764  222211    11      12334567777778899


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +||...
T Consensus        63 vVid~t   68 (257)
T PRK00048         63 VLIDFT   68 (257)
T ss_pred             EEEECC
Confidence            998664

>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

Probab=95.79  E-value=0.054  Score=56.58  Aligned_cols=94  Identities=19%  Similarity=0.207  Sum_probs=57.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      .||+||| .|.+|..++..|...|...     +|..+|+++  ++++ .+.++  ..     .....++..++++++|+|
T Consensus         4 ~~I~IIG-~G~mG~ala~~l~~~G~~~-----~V~~~d~~~--~~~~-~a~~~--g~-----~~~~~~~~~~~~~~aDvV   67 (735)
T PRK14806          4 GRVVVIG-LGLIGGSFAKALRERGLAR-----EVVAVDRRA--KSLE-LAVSL--GV-----IDRGEEDLAEAVSGADVI   67 (735)
T ss_pred             cEEEEEe-eCHHHHHHHHHHHhcCCCC-----EEEEEECCh--hHHH-HHHHC--CC-----CCcccCCHHHHhcCCCEE
Confidence            6899999 7999999999998876311     689999874  3322 11111  11     001234566778999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      |++...                ..+.++.+.+..+.+++.+|+.++
T Consensus        68 ilavp~----------------~~~~~vl~~l~~~~~~~~ii~d~~   97 (735)
T PRK14806         68 VLAVPV----------------LAMEKVLADLKPLLSEHAIVTDVG   97 (735)
T ss_pred             EECCCH----------------HHHHHHHHHHHHhcCCCcEEEEcC
Confidence            998531                123455555555544555444443

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.78  E-value=0.093  Score=51.35  Aligned_cols=104  Identities=22%  Similarity=0.215  Sum_probs=60.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      |.++.++|.|+| +|.+|..++..|+..|.       +|+++|.+.. +.+.....++...    ..++.......+...
T Consensus         1 ~~~~~k~v~iiG-~g~~G~~~A~~l~~~G~-------~V~~~d~~~~-~~~~~~~~~l~~~----~~~~~~~~~~~~~~~   67 (450)
T PRK14106          1 MELKGKKVLVVG-AGVSGLALAKFLKKLGA-------KVILTDEKEE-DQLKEALEELGEL----GIELVLGEYPEEFLE   67 (450)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCch-HHHHHHHHHHHhc----CCEEEeCCcchhHhh
Confidence            545568999999 58899999999998874       7999998742 2222111222211    111211111224457


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHH
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALE  118 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~  118 (332)
                      ++|+||.++|.+... ......-..++++++......+
T Consensus        68 ~~d~vv~~~g~~~~~-~~~~~a~~~~i~~~~~~~~~~~  104 (450)
T PRK14106         68 GVDLVVVSPGVPLDS-PPVVQAHKKGIEVIGEVELAYR  104 (450)
T ss_pred             cCCEEEECCCCCCCC-HHHHHHHHCCCcEEeHHHHHHh
Confidence            899999999875321 1111222456666666555444

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=95.77  E-value=0.1  Score=43.01  Aligned_cols=117  Identities=15%  Similarity=0.087  Sum_probs=62.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH---HHHhhhhcC---CccceEeeCChhhh-
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK---MELVDAAFP---LLKGVVATTDAVEA-   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~---~dl~~~~~~---~~~~~~~~~~~~~a-   78 (332)
                      .++.|+||+|.+|.+++..|+..+..      .+.+.++++.  ......   .++......   ...++.-..+..+. 
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~------~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGAR------HLVLLSRSGP--DAPGAAELLAELEALGAEVTVVACDVADRAALAAAL   72 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCC------eEEEEeCCCC--CCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            36899999999999999999876531      4666666531  111111   122111100   00000000011111 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                            ....|.||+.+|.....   ..+   ....+..|+.....+.+.+.+.. + .+++++|.
T Consensus        73 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~ii~~ss  136 (180)
T smart00822       73 AAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-L-DFFVLFSS  136 (180)
T ss_pred             HHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-c-ceEEEEcc
Confidence                  23359999999864321   112   23446778877788888776543 3 45666654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.75  E-value=0.024  Score=53.39  Aligned_cols=72  Identities=21%  Similarity=0.330  Sum_probs=43.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ++||+|+||+|.+|..++..|...+.  +  ..+++.+-.+..    .+...++..      ..+.+......+++++|+
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~h--p--~~~l~~l~s~~~----~g~~l~~~g------~~i~v~d~~~~~~~~vDv   66 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNF--P--VDKLRLLASARS----AGKELSFKG------KELKVEDLTTFDFSGVDI   66 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC--C--cceEEEEEcccc----CCCeeeeCC------ceeEEeeCCHHHHcCCCE
Confidence            36999999999999999999987432  1  125666644321    222222211      123332222345689999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      ||++.|
T Consensus        67 Vf~A~g   72 (334)
T PRK14874         67 ALFSAG   72 (334)
T ss_pred             EEECCC
Confidence            999865

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.74  E-value=0.048  Score=53.11  Aligned_cols=105  Identities=17%  Similarity=0.212  Sum_probs=62.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..++|+|+| +|.+|..++..|...|. .     ++.++|++.  +++...+.++.       ..+....+..+++.++|
T Consensus       181 ~~~~vlViG-aG~iG~~~a~~L~~~G~-~-----~V~v~~r~~--~ra~~la~~~g-------~~~~~~~~~~~~l~~aD  244 (423)
T PRK00045        181 SGKKVLVIG-AGEMGELVAKHLAEKGV-R-----KITVANRTL--ERAEELAEEFG-------GEAIPLDELPEALAEAD  244 (423)
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHHCCC-C-----eEEEEeCCH--HHHHHHHHHcC-------CcEeeHHHHHHHhccCC
Confidence            347999999 69999999998887653 2     689999874  33332222221       01111234567789999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      +||.+.|.+.. -.+        .+.++..   +..-..++.+++-+++|-|+
T Consensus       245 vVI~aT~s~~~-~i~--------~~~l~~~---~~~~~~~~~vviDla~Prdi  285 (423)
T PRK00045        245 IVISSTGAPHP-IIG--------KGMVERA---LKARRHRPLLLVDLAVPRDI  285 (423)
T ss_pred             EEEECCCCCCc-EEc--------HHHHHHH---HhhccCCCeEEEEeCCCCCC
Confidence            99998765521 111        1111111   11111124678889999875

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=95.72  E-value=0.05  Score=48.13  Aligned_cols=25  Identities=32%  Similarity=0.359  Sum_probs=22.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhccc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVM   30 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~   30 (332)
                      +.+.|+||+|++|++++..|+..|.
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~   26 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGY   26 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC
Confidence            3689999999999999999998763

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=95.71  E-value=0.034  Score=52.64  Aligned_cols=24  Identities=25%  Similarity=0.427  Sum_probs=21.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARG   28 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~   28 (332)
                      ++||+|+||+|.+|..++..|...
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~   25 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNH   25 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcC
Confidence            369999999999999999888864

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=95.66  E-value=0.039  Score=51.94  Aligned_cols=75  Identities=23%  Similarity=0.260  Sum_probs=44.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      -++.+||+|+||+|.+|..+...|.....  +.  .+|+++--+.    -.|....+..      ..+.+....+.++.+
T Consensus         1 ~~~~~~vaIvGATG~vG~ellrlL~~~~h--P~--~~l~~laS~~----saG~~~~~~~------~~~~v~~~~~~~~~~   66 (336)
T PRK08040          1 MSEGWNIALLGATGAVGEALLELLAERQF--PV--GELYALASEE----SAGETLRFGG------KSVTVQDAAEFDWSQ   66 (336)
T ss_pred             CCCCCEEEEEccCCHHHHHHHHHHhcCCC--Cc--eEEEEEEccC----cCCceEEECC------cceEEEeCchhhccC
Confidence            03567999999999999999998887421  11  1677774321    1232222211      133343222344578


Q ss_pred             CcEEEEeCC
Q 020022           82 VNIAVMVGG   90 (332)
Q Consensus        82 aDiVi~~ag   90 (332)
                      +|+|+++.+
T Consensus        67 ~Dvvf~a~p   75 (336)
T PRK08040         67 AQLAFFVAG   75 (336)
T ss_pred             CCEEEECCC
Confidence            999999864

>PLN02858 fructose-bisphosphate aldolase

Probab=95.65  E-value=0.068  Score=59.32  Aligned_cols=70  Identities=17%  Similarity=0.294  Sum_probs=49.2

Q ss_pred             CCCC-CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            1 MAKE-PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~~-~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      |+.+ .+||++|| .|.||..++..|+..|.       ++..+|+++  +++.    .+.+..      .....+..+++
T Consensus       319 ~~~~~~~~IGfIG-lG~MG~~mA~~L~~~G~-------~V~v~dr~~--~~~~----~l~~~G------a~~~~s~~e~~  378 (1378)
T PLN02858        319 MQAKPVKRIGFIG-LGAMGFGMASHLLKSNF-------SVCGYDVYK--PTLV----RFENAG------GLAGNSPAEVA  378 (1378)
T ss_pred             ccccCCCeEEEEC-chHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHH----HHHHcC------CeecCCHHHHH
Confidence            4433 47999999 89999999999998763       799999874  3322    222211      11234567888


Q ss_pred             CCCcEEEEeCC
Q 020022           80 TGVNIAVMVGG   90 (332)
Q Consensus        80 ~~aDiVi~~ag   90 (332)
                      ++||+||++..
T Consensus       379 ~~aDvVi~~V~  389 (1378)
T PLN02858        379 KDVDVLVIMVA  389 (1378)
T ss_pred             hcCCEEEEecC
Confidence            99999999854

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.65  E-value=0.043  Score=51.90  Aligned_cols=74  Identities=19%  Similarity=0.295  Sum_probs=44.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .++||+|+||+|.+|..+...|...+.  +.  .++..+.-..    -.|...+...      ..+.+..-..+++.++|
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~h--P~--~~l~~las~r----saGk~~~~~~------~~~~v~~~~~~~~~~~D   71 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDF--PY--SSLKMLASAR----SAGKKVTFEG------RDYTVEELTEDSFDGVD   71 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--Cc--ceEEEEEccC----CCCCeeeecC------ceeEEEeCCHHHHcCCC
Confidence            468999999999999999988876432  11  1565554321    1222222211      12333322345678999


Q ss_pred             EEEEeCCC
Q 020022           84 IAVMVGGF   91 (332)
Q Consensus        84 iVi~~ag~   91 (332)
                      +||++++.
T Consensus        72 ~vf~a~p~   79 (344)
T PLN02383         72 IALFSAGG   79 (344)
T ss_pred             EEEECCCc
Confidence            99998753

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.65  E-value=0.1  Score=46.33  Aligned_cols=77  Identities=22%  Similarity=0.315  Sum_probs=47.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc--hhh---hhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--AEA---LNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~--~~~---l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      ..||.|+| +|.+|..++..|...|+-    .-++.++|++..  .++   +......+.+....  ..  ...++.+++
T Consensus        25 ~~rvlvlG-AGgAg~aiA~~L~~~G~~----~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~--~~--~~~~l~~~l   95 (226)
T cd05311          25 EVKIVING-AGAAGIAIARLLLAAGAK----PENIVVVDSKGVIYEGREDDLNPDKNEIAKETNP--EK--TGGTLKEAL   95 (226)
T ss_pred             CCEEEEEC-chHHHHHHHHHHHHcCcC----cceEEEEeCCCccccccchhhhHHHHHHHHHhcc--Cc--ccCCHHHHH
Confidence            46999999 699999999999887652    015999999720  011   21122223221100  11  113566889


Q ss_pred             CCCcEEEEeCC
Q 020022           80 TGVNIAVMVGG   90 (332)
Q Consensus        80 ~~aDiVi~~ag   90 (332)
                      +++|+||-+-+
T Consensus        96 ~~~dvlIgaT~  106 (226)
T cd05311          96 KGADVFIGVSR  106 (226)
T ss_pred             hcCCEEEeCCC
Confidence            99999998754

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.61  E-value=0.067  Score=51.89  Aligned_cols=65  Identities=20%  Similarity=0.151  Sum_probs=45.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|..++..+...|.       +|..+|+++  .++....+   +..       .. .+..++++++|+
T Consensus       212 Gk~VlViG-~G~IG~~vA~~lr~~Ga-------~ViV~d~dp--~ra~~A~~---~G~-------~v-~~l~eal~~aDV  270 (425)
T PRK05476        212 GKVVVVAG-YGDVGKGCAQRLRGLGA-------RVIVTEVDP--ICALQAAM---DGF-------RV-MTMEEAAELGDI  270 (425)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEcCCc--hhhHHHHh---cCC-------Ee-cCHHHHHhCCCE
Confidence            46899999 69999999999987764       789999875  22211111   111       11 245678899999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      ||.+.|
T Consensus       271 VI~aTG  276 (425)
T PRK05476        271 FVTATG  276 (425)
T ss_pred             EEECCC
Confidence            988754

>PRK06199 ornithine cyclodeaminase; Validated

Probab=95.61  E-value=0.069  Score=51.21  Aligned_cols=77  Identities=13%  Similarity=0.244  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcc-cCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ...+++|+| +|..+...+..++... -+.     +|.++|+++  ++++..+.++.+. ++....+....+.++++++|
T Consensus       154 da~~l~iiG-~G~QA~~~l~a~~~v~~~i~-----~V~v~~r~~--~~a~~f~~~~~~~-~~~~~~v~~~~s~~eav~~A  224 (379)
T PRK06199        154 DSKVVGLLG-PGVMGKTILAAFMAVCPGID-----TIKIKGRGQ--KSLDSFATWVAET-YPQITNVEVVDSIEEVVRGS  224 (379)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHhcCCcc-----EEEEECCCH--HHHHHHHHHHHHh-cCCCceEEEeCCHHHHHcCC
Confidence            357899999 7999988777766521 123     899999984  5555555555432 11112466677899999999


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+|+.+-
T Consensus       225 DIVvtaT  231 (379)
T PRK06199        225 DIVTYCN  231 (379)
T ss_pred             CEEEEcc
Confidence            9998753

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=95.60  E-value=0.035  Score=50.66  Aligned_cols=68  Identities=16%  Similarity=0.247  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|..|| .|.+|++++..|+..|.       .++.||++.  +    ...+|++...      ++.....|-.++||+
T Consensus        35 ~~~iGFIG-LG~MG~~M~~nLik~G~-------kVtV~dr~~--~----k~~~f~~~Ga------~v~~sPaeVae~sDv   94 (327)
T KOG0409|consen   35 KTRIGFIG-LGNMGSAMVSNLIKAGY-------KVTVYDRTK--D----KCKEFQEAGA------RVANSPAEVAEDSDV   94 (327)
T ss_pred             cceeeEEe-eccchHHHHHHHHHcCC-------EEEEEeCcH--H----HHHHHHHhch------hhhCCHHHHHhhcCE
Confidence            36999999 99999999999998874       799999873  2    3345554321      123456788899999


Q ss_pred             EEEeCCCC
Q 020022           85 AVMVGGFP   92 (332)
Q Consensus        85 Vi~~ag~~   92 (332)
                      ||...+.+
T Consensus        95 vitmv~~~  102 (327)
T KOG0409|consen   95 VITMVPNP  102 (327)
T ss_pred             EEEEcCCh
Confidence            99986654

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.59  E-value=0.14  Score=41.83  Aligned_cols=32  Identities=31%  Similarity=0.594  Sum_probs=28.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ||+|+| +|.+|+.++..|+..|+ +     ++.++|.+
T Consensus         1 ~VliiG-~GglGs~ia~~L~~~Gv-~-----~i~ivD~d   32 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLARSGV-G-----KITLIDFD   32 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCC-C-----EEEEEcCC
Confidence            689999 69999999999999886 3     79999976

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=95.58  E-value=0.12  Score=48.25  Aligned_cols=65  Identities=12%  Similarity=0.053  Sum_probs=42.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| .|.+|.+++..|...|+       ++..++... .+...    .+...      .+... +..+++++||+
T Consensus         3 ~kkIgiIG-~G~mG~AiA~~L~~sG~-------~Viv~~~~~-~~~~~----~a~~~------Gv~~~-s~~ea~~~ADi   62 (314)
T TIGR00465         3 GKTVAIIG-YGSQGHAQALNLRDSGL-------NVIVGLRKG-GASWK----KATED------GFKVG-TVEEAIPQADL   62 (314)
T ss_pred             cCEEEEEe-EcHHHHHHHHHHHHCCC-------eEEEEECcC-hhhHH----HHHHC------CCEEC-CHHHHHhcCCE
Confidence            46899999 79999999999998763       455555432 11111    11111      11222 46778899999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      |+++.
T Consensus        63 VvLaV   67 (314)
T TIGR00465        63 IMNLL   67 (314)
T ss_pred             EEEeC
Confidence            99985

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=95.58  E-value=0.05  Score=49.55  Aligned_cols=68  Identities=19%  Similarity=0.268  Sum_probs=44.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      +||+||| .|.+|..++..+...+. +    .+ +.++|++.  ++.+    ++.+..     .....++..+.+.++|+
T Consensus         2 mrIgIIG-~G~iG~~ia~~l~~~~~-~----~elv~v~d~~~--~~a~----~~a~~~-----~~~~~~~~~ell~~~Dv   64 (265)
T PRK13304          2 LKIGIVG-CGAIASLITKAILSGRI-N----AELYAFYDRNL--EKAE----NLASKT-----GAKACLSIDELVEDVDL   64 (265)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHcCCC-C----eEEEEEECCCH--HHHH----HHHHhc-----CCeeECCHHHHhcCCCE
Confidence            6999999 79999999988876431 1    13 56788873  3322    222210     11234566676789999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |++++.
T Consensus        65 Vvi~a~   70 (265)
T PRK13304         65 VVECAS   70 (265)
T ss_pred             EEEcCC
Confidence            999863

>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional

Probab=95.56  E-value=0.15  Score=48.12  Aligned_cols=57  Identities=18%  Similarity=0.161  Sum_probs=36.6

Q ss_pred             HHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH-HhhhhcCCccceEeeCChhhhcCCCcEEEEeC
Q 020022           18 GYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME-LVDAAFPLLKGVVATTDAVEACTGVNIAVMVG   89 (332)
Q Consensus        18 G~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d-l~~~~~~~~~~~~~~~~~~~al~~aDiVi~~a   89 (332)
                      |..++..|+..|.       +|+++|+++  +.+.....+ +..      ..++..++..+++++||+||++.
T Consensus        32 G~~MA~~La~aG~-------~V~v~Dr~~--~~l~~~~~~~l~~------~Gi~~asd~~eaa~~ADvVIlaV   89 (342)
T PRK12557         32 GSRMAIEFAEAGH-------DVVLAEPNR--SILSEELWKKVED------AGVKVVSDDAEAAKHGEIHILFT   89 (342)
T ss_pred             HHHHHHHHHhCCC-------eEEEEECCH--HHhhHHHHHHHHH------CCCEEeCCHHHHHhCCCEEEEEC
Confidence            6778888887662       799999874  222111111 111      13445567778889999999983

>TIGR00936 ahcY adenosylhomocysteinase

Probab=95.53  E-value=0.074  Score=51.31  Aligned_cols=65  Identities=17%  Similarity=0.088  Sum_probs=44.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|..++..+...|.       ++..+|+++  .+.. .+.  .+..       .. .+..++++++|+
T Consensus       195 Gk~VvViG-~G~IG~~vA~~ak~~Ga-------~ViV~d~dp--~r~~-~A~--~~G~-------~v-~~leeal~~aDV  253 (406)
T TIGR00936       195 GKTVVVAG-YGWCGKGIAMRARGMGA-------RVIVTEVDP--IRAL-EAA--MDGF-------RV-MTMEEAAKIGDI  253 (406)
T ss_pred             cCEEEEEC-CCHHHHHHHHHHhhCcC-------EEEEEeCCh--hhHH-HHH--hcCC-------Ee-CCHHHHHhcCCE
Confidence            46999999 79999999999887653       788899875  2221 111  1111       11 134678899999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      ||.+.|
T Consensus       254 VItaTG  259 (406)
T TIGR00936       254 FITATG  259 (406)
T ss_pred             EEECCC
Confidence            988754

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=95.52  E-value=0.044  Score=52.38  Aligned_cols=62  Identities=16%  Similarity=0.135  Sum_probs=43.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.||+.++..|..-|+       ++..+|...  .  . .    ....        ...++.+.++.||+
T Consensus       116 gktvGIIG-~G~IG~~vA~~l~a~G~-------~V~~~dp~~--~--~-~----~~~~--------~~~~L~ell~~sDi  170 (378)
T PRK15438        116 DRTVGIVG-VGNVGRRLQARLEALGI-------KTLLCDPPR--A--D-R----GDEG--------DFRSLDELVQEADI  170 (378)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCcc--c--c-c----cccc--------ccCCHHHHHhhCCE
Confidence            47999999 79999999999987664       799998532  1  0 0    0000        01357888899999


Q ss_pred             EEEeCCC
Q 020022           85 AVMVGGF   91 (332)
Q Consensus        85 Vi~~ag~   91 (332)
                      |++..-.
T Consensus       171 I~lh~PL  177 (378)
T PRK15438        171 LTFHTPL  177 (378)
T ss_pred             EEEeCCC
Confidence            9986543

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.48  E-value=0.07  Score=53.45  Aligned_cols=64  Identities=17%  Similarity=0.093  Sum_probs=45.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|+.++..|..-|+       +|..||.....+    ...++         .+... ++.+.++.||+
T Consensus       140 gktvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~~----~~~~~---------g~~~~-~l~ell~~aDi  197 (526)
T PRK13581        140 GKTLGIIG-LGRIGSEVAKRAKAFGM-------KVIAYDPYISPE----RAAQL---------GVELV-SLDELLARADF  197 (526)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCChh----HHHhc---------CCEEE-cHHHHHhhCCE
Confidence            47999999 79999999999987554       799999753111    11111         11222 57888999999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |++..-
T Consensus       198 V~l~lP  203 (526)
T PRK13581        198 ITLHTP  203 (526)
T ss_pred             EEEccC
Confidence            999854

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.47  E-value=0.04  Score=50.81  Aligned_cols=55  Identities=20%  Similarity=0.349  Sum_probs=44.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|||.+|.||..++..|+..|.       ++.+++...                          .+..+.++.||+
T Consensus       159 Gk~V~vIG~s~ivG~PmA~~L~~~ga-------tVtv~~~~t--------------------------~~l~e~~~~ADI  205 (301)
T PRK14194        159 GKHAVVIGRSNIVGKPMAALLLQAHC-------SVTVVHSRS--------------------------TDAKALCRQADI  205 (301)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCC-------EEEEECCCC--------------------------CCHHHHHhcCCE
Confidence            47999999656999999999998763       788887542                          135677899999


Q ss_pred             EEEeCCCC
Q 020022           85 AVMVGGFP   92 (332)
Q Consensus        85 Vi~~ag~~   92 (332)
                      ||.+.|.+
T Consensus       206 VIsavg~~  213 (301)
T PRK14194        206 VVAAVGRP  213 (301)
T ss_pred             EEEecCCh
Confidence            99998866

>PRK08818 prephenate dehydrogenase; Provisional

Probab=95.45  E-value=0.14  Score=48.94  Aligned_cols=57  Identities=14%  Similarity=0.161  Sum_probs=41.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..+||+|||.+|-||..++..|....  +    .+|+.+|+..              .         ...+..+++++||
T Consensus         3 ~~~~I~IIGl~GliGgslA~alk~~~--~----~~V~g~D~~d--------------~---------~~~~~~~~v~~aD   53 (370)
T PRK08818          3 AQPVVGIVGSAGAYGRWLARFLRTRM--Q----LEVIGHDPAD--------------P---------GSLDPATLLQRAD   53 (370)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcC--C----CEEEEEcCCc--------------c---------ccCCHHHHhcCCC
Confidence            34699999944999999999998641  2    1788888631              0         0124567789999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +||++.
T Consensus        54 lVilav   59 (370)
T PRK08818         54 VLIFSA   59 (370)
T ss_pred             EEEEeC
Confidence            999984

>PLN02306 hydroxypyruvate reductase

Probab=95.44  E-value=0.084  Score=50.70  Aligned_cols=105  Identities=15%  Similarity=0.078  Sum_probs=58.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHH-hcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh-h--hcCCccceEeeCChhhhcC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIA-RGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD-A--AFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~-~--~~~~~~~~~~~~~~~~al~   80 (332)
                      .++|+|+| .|.||+.++..+. .-|+       +|..||.... .........+.. .  .......+....++.+.++
T Consensus       165 gktvGIiG-~G~IG~~vA~~l~~~fGm-------~V~~~d~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~  235 (386)
T PLN02306        165 GQTVGVIG-AGRIGSAYARMMVEGFKM-------NLIYYDLYQS-TRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLR  235 (386)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCC-------EEEEECCCCc-hhhhhhhhhhcccccccccccccccccCCHHHHHh
Confidence            37999999 7999999999875 3332       7899997642 111100001100 0  0000011222347889999


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      .||+|++..-...   .+ ..++  |.       +.+... +|++++|+++-
T Consensus       236 ~sDiV~lh~Plt~---~T-~~li--n~-------~~l~~M-K~ga~lIN~aR  273 (386)
T PLN02306        236 EADVISLHPVLDK---TT-YHLI--NK-------ERLALM-KKEAVLVNASR  273 (386)
T ss_pred             hCCEEEEeCCCCh---hh-hhhc--CH-------HHHHhC-CCCeEEEECCC
Confidence            9999999753321   11 1111  11       233333 47888888873

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.43  E-value=0.52  Score=43.97  Aligned_cols=162  Identities=15%  Similarity=0.115  Sum_probs=94.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-----------ccceE-ee
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----------LKGVV-AT   72 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-----------~~~~~-~~   72 (332)
                      .+.+.||||++.+|..+|..|+..|.       +|++..++.  ++.+..+.++.......           ...+. ..
T Consensus        35 ~~~~vVTGansGIG~eta~~La~~Ga-------~Vv~~~R~~--~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa  105 (314)
T KOG1208|consen   35 GKVALVTGATSGIGFETARELALRGA-------HVVLACRNE--ERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFA  105 (314)
T ss_pred             CcEEEEECCCCchHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHH
Confidence            45788999999999999999999873       788998874  44444455555411100           01111 11


Q ss_pred             CChhhhcCCCcEEEEeCCCCCCCCC-CH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCccc----chHHH
Q 020022           73 TDAVEACTGVNIAVMVGGFPRKEGM-ER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPAN----TNALI  140 (332)
Q Consensus        73 ~~~~~al~~aDiVi~~ag~~~~~~~-~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~----~~~~~  140 (332)
                      .........-|+.|..||+...+.. +.   +..+..|-    -++..+.+.+++.+ | ++||++|.=..    -+..+
T Consensus       106 ~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~-~RIV~vsS~~~~~~~~~~~l  183 (314)
T KOG1208|consen  106 EEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-P-SRIVNVSSILGGGKIDLKDL  183 (314)
T ss_pred             HHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-C-CCEEEEcCccccCccchhhc
Confidence            1223345678999999998554332 11   12233333    45667778887765 4 68888875221    01111


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      -.+..+.+...+.++.+.+...-+-..+++++.-   +|+
T Consensus       184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~---~V~  220 (314)
T KOG1208|consen  184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK---GVT  220 (314)
T ss_pred             cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc---Cce
Confidence            1111111332234677788777888888888864   555

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.43  E-value=0.15  Score=49.36  Aligned_cols=66  Identities=15%  Similarity=0.104  Sum_probs=45.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ..+|+|+| .|.+|..++..+...|.       ++..+|+++  .++. .+..  ...       .. ....++++++|+
T Consensus       202 GktVvViG-~G~IG~~va~~ak~~Ga-------~ViV~d~d~--~R~~-~A~~--~G~-------~~-~~~~e~v~~aDV  260 (413)
T cd00401         202 GKVAVVAG-YGDVGKGCAQSLRGQGA-------RVIVTEVDP--ICAL-QAAM--EGY-------EV-MTMEEAVKEGDI  260 (413)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEECCh--hhHH-HHHh--cCC-------EE-ccHHHHHcCCCE
Confidence            46999999 69999999999887764       678899874  3322 1221  111       11 124577899999


Q ss_pred             EEEeCCC
Q 020022           85 AVMVGGF   91 (332)
Q Consensus        85 Vi~~ag~   91 (332)
                      ||.+.|.
T Consensus       261 VI~atG~  267 (413)
T cd00401         261 FVTTTGN  267 (413)
T ss_pred             EEECCCC
Confidence            9988663

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.35  E-value=0.1  Score=43.61  Aligned_cols=65  Identities=12%  Similarity=0.076  Sum_probs=41.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||.|+| +|.+|...+..|+..|.       ++++++.+    ..+ ...++..      ..+....-.++.+.++|+
T Consensus        13 ~~~vlVvG-GG~va~rka~~Ll~~ga-------~V~VIsp~----~~~-~l~~l~~------i~~~~~~~~~~dl~~a~l   73 (157)
T PRK06719         13 NKVVVIIG-GGKIAYRKASGLKDTGA-------FVTVVSPE----ICK-EMKELPY------ITWKQKTFSNDDIKDAHL   73 (157)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEcCc----cCH-HHHhccC------cEEEecccChhcCCCceE
Confidence            47999999 69999999999988763       78888643    221 1112211      011111223456899999


Q ss_pred             EEEe
Q 020022           85 AVMV   88 (332)
Q Consensus        85 Vi~~   88 (332)
                      ||.+
T Consensus        74 Viaa   77 (157)
T PRK06719         74 IYAA   77 (157)
T ss_pred             EEEC
Confidence            8887

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.35  E-value=0.054  Score=51.52  Aligned_cols=73  Identities=14%  Similarity=0.204  Sum_probs=42.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+|+||+|.+|..+...++...-+.   ..+++++....    ..+....+...     ..........+.++++|+|
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~---~~~l~~~ss~~----sg~~~~~f~g~-----~~~v~~~~~~~~~~~~Div   69 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFD---LIEPVFFSTSQ----AGGAAPSFGGK-----EGTLQDAFDIDALKKLDII   69 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCC---cCcEEEecchh----hCCcccccCCC-----cceEEecCChhHhcCCCEE
Confidence            689999999999999998666654332   11477765431    11122122110     0111221223557899999


Q ss_pred             EEeCC
Q 020022           86 VMVGG   90 (332)
Q Consensus        86 i~~ag   90 (332)
                      ++++|
T Consensus        70 f~a~~   74 (369)
T PRK06598         70 ITCQG   74 (369)
T ss_pred             EECCC
Confidence            99876

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=95.33  E-value=0.053  Score=51.94  Aligned_cols=62  Identities=15%  Similarity=0.099  Sum_probs=44.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+||| .|.||+.++..+..-|+       ++..+|...  ....       ..       . ...++.+.+++||+
T Consensus       116 gktvGIIG-~G~IG~~va~~l~a~G~-------~V~~~Dp~~--~~~~-------~~-------~-~~~~l~ell~~aDi  170 (381)
T PRK00257        116 ERTYGVVG-AGHVGGRLVRVLRGLGW-------KVLVCDPPR--QEAE-------GD-------G-DFVSLERILEECDV  170 (381)
T ss_pred             cCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEECCcc--cccc-------cC-------c-cccCHHHHHhhCCE
Confidence            47899999 79999999999987664       799999742  1110       00       0 01357788899999


Q ss_pred             EEEeCCC
Q 020022           85 AVMVGGF   91 (332)
Q Consensus        85 Vi~~ag~   91 (332)
                      |++..-.
T Consensus       171 V~lh~Pl  177 (381)
T PRK00257        171 ISLHTPL  177 (381)
T ss_pred             EEEeCcC
Confidence            9987543

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.30  E-value=0.046  Score=50.98  Aligned_cols=35  Identities=26%  Similarity=0.386  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ++||+|+||+|..|..+...|...+      .+|+.++.-.
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp------~ve~~~~ss~   36 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHP------DVELILISSR   36 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCC------CeEEEEeech
Confidence            5799999999999999999998754      2377777654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.28  E-value=0.11  Score=47.58  Aligned_cols=74  Identities=11%  Similarity=0.077  Sum_probs=49.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++++|+| +|.+|.+++..|...|..      +|.+++++.  ++++..+.++....     .+....+..+.+.++|+
T Consensus       123 ~k~vlVlG-aGg~a~ai~~aL~~~g~~------~V~v~~R~~--~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~~Di  188 (278)
T PRK00258        123 GKRILILG-AGGAARAVILPLLDLGVA------EITIVNRTV--ERAEELAKLFGALG-----KAELDLELQEELADFDL  188 (278)
T ss_pred             CCEEEEEc-CcHHHHHHHHHHHHcCCC------EEEEEeCCH--HHHHHHHHHhhhcc-----ceeecccchhccccCCE
Confidence            46899999 699999999999987642      799999974  44443333332110     12221234567889999


Q ss_pred             EEEeCCCC
Q 020022           85 AVMVGGFP   92 (332)
Q Consensus        85 Vi~~ag~~   92 (332)
                      ||.+....
T Consensus       189 vInaTp~g  196 (278)
T PRK00258        189 IINATSAG  196 (278)
T ss_pred             EEECCcCC
Confidence            99985443

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=95.23  E-value=0.073  Score=53.33  Aligned_cols=65  Identities=20%  Similarity=0.099  Sum_probs=45.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|+.+|..|..-|+       ++..||.....+    ...++         .+....++.+.+++||+
T Consensus       138 gktvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~~----~~~~~---------g~~~~~~l~ell~~aDv  196 (525)
T TIGR01327       138 GKTLGVIG-LGRIGSIVAKRAKAFGM-------KVLAYDPYISPE----RAEQL---------GVELVDDLDELLARADF  196 (525)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCChh----HHHhc---------CCEEcCCHHHHHhhCCE
Confidence            36999999 89999999999986553       799999742111    11111         11222467888999999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |++...
T Consensus       197 V~l~lP  202 (525)
T TIGR01327       197 ITVHTP  202 (525)
T ss_pred             EEEccC
Confidence            999854

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK06436 glycerate dehydrogenase; Provisional

Probab=95.22  E-value=0.054  Score=50.33  Aligned_cols=88  Identities=10%  Similarity=0.075  Sum_probs=55.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.||+.++..+..-|+       ++..+|+...   ..       ...       ....++.+.++.||+
T Consensus       122 gktvgIiG-~G~IG~~vA~~l~afG~-------~V~~~~r~~~---~~-------~~~-------~~~~~l~ell~~aDi  176 (303)
T PRK06436        122 NKSLGILG-YGGIGRRVALLAKAFGM-------NIYAYTRSYV---ND-------GIS-------SIYMEPEDIMKKSDF  176 (303)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCCCc---cc-------Ccc-------cccCCHHHHHhhCCE
Confidence            47999999 89999999987765453       7999997521   00       000       012357888999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      |++......   .+ ..++  |       .+.+... +|++++|+++
T Consensus       177 v~~~lp~t~---~T-~~li--~-------~~~l~~m-k~ga~lIN~s  209 (303)
T PRK06436        177 VLISLPLTD---ET-RGMI--N-------SKMLSLF-RKGLAIINVA  209 (303)
T ss_pred             EEECCCCCc---hh-hcCc--C-------HHHHhcC-CCCeEEEECC
Confidence            999853321   11 1111  1       2233333 4788888886

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.17  E-value=0.096  Score=47.10  Aligned_cols=35  Identities=34%  Similarity=0.557  Sum_probs=30.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..||+|+| +|.+|+.++..|+..|+ +     +++++|-+.
T Consensus        32 ~~~VliiG-~GglGs~va~~La~~Gv-g-----~i~lvD~D~   66 (245)
T PRK05690         32 AARVLVVG-LGGLGCAASQYLAAAGV-G-----TLTLVDFDT   66 (245)
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHcCC-C-----EEEEEcCCE
Confidence            46999999 69999999999999885 4     799999764

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.16  E-value=0.053  Score=46.68  Aligned_cols=77  Identities=9%  Similarity=0.103  Sum_probs=48.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|||.+.-||..++.+|+..+.       .+..+|++....+..+.  .+.|...+.   -....++.+.++.||+
T Consensus        62 GK~vvVIGrS~iVGkPla~lL~~~~A-------tVti~~~~~~~~~~~~~--~~~hs~t~~---~~~~~~l~~~~~~ADI  129 (197)
T cd01079          62 GKTITIINRSEVVGRPLAALLANDGA-------RVYSVDINGIQVFTRGE--SIRHEKHHV---TDEEAMTLDCLSQSDV  129 (197)
T ss_pred             CCEEEEECCCccchHHHHHHHHHCCC-------EEEEEecCccccccccc--ccccccccc---cchhhHHHHHhhhCCE
Confidence            47999999888999999999998763       78999876421111110  011111000   0001125678899999


Q ss_pred             EEEeCCCCC
Q 020022           85 AVMVGGFPR   93 (332)
Q Consensus        85 Vi~~ag~~~   93 (332)
                      ||.+.|.+.
T Consensus       130 VIsAvG~~~  138 (197)
T cd01079         130 VITGVPSPN  138 (197)
T ss_pred             EEEccCCCC
Confidence            999998763

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.15  E-value=0.088  Score=44.08  Aligned_cols=56  Identities=20%  Similarity=0.259  Sum_probs=40.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..++|+|+|.++.||..++.+|...+.       .+.+.+...                          .++.+.++.||
T Consensus        35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~a-------tVt~~h~~T--------------------------~~l~~~~~~AD   81 (160)
T PF02882_consen   35 EGKKVVVVGRSNIVGKPLAMLLLNKGA-------TVTICHSKT--------------------------KNLQEITRRAD   81 (160)
T ss_dssp             TT-EEEEE-TTTTTHHHHHHHHHHTT--------EEEEE-TTS--------------------------SSHHHHHTTSS
T ss_pred             CCCEEEEECCcCCCChHHHHHHHhCCC-------eEEeccCCC--------------------------Ccccceeeecc
Confidence            347999999888899999999998753       677776431                          24556678999


Q ss_pred             EEEEeCCCC
Q 020022           84 IAVMVGGFP   92 (332)
Q Consensus        84 iVi~~ag~~   92 (332)
                      +||.++|.+
T Consensus        82 IVVsa~G~~   90 (160)
T PF02882_consen   82 IVVSAVGKP   90 (160)
T ss_dssp             EEEE-SSST
T ss_pred             EEeeeeccc
Confidence            999999876

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK06046 alanine dehydrogenase; Validated

Probab=95.13  E-value=0.11  Score=48.72  Aligned_cols=74  Identities=18%  Similarity=0.183  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .+.+|+|+| +|.+|...+..+....-+.     ++.++|+++  ++++..+.++.+.   ....+....+..++++ +|
T Consensus       128 ~~~~vgiiG-~G~qa~~h~~al~~~~~i~-----~v~v~~r~~--~~~~~~~~~~~~~---~~~~v~~~~~~~~~l~-aD  195 (326)
T PRK06046        128 DSKVVGIIG-AGNQARTQLLALSEVFDLE-----EVRVYDRTK--SSAEKFVERMSSV---VGCDVTVAEDIEEACD-CD  195 (326)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhhCCce-----EEEEECCCH--HHHHHHHHHHHhh---cCceEEEeCCHHHHhh-CC
Confidence            357899999 7999998887776432222     799999984  4444444444321   1223455567778886 99


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +|+++-
T Consensus       196 iVv~aT  201 (326)
T PRK06046        196 ILVTTT  201 (326)
T ss_pred             EEEEec
Confidence            999874

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.13  E-value=0.084  Score=51.73  Aligned_cols=90  Identities=14%  Similarity=0.098  Sum_probs=57.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|..++..+...|.       +|..+|+++  .+.. .+..  +.       +.. .+..++++.||+
T Consensus       254 GKtVgVIG-~G~IGr~vA~rL~a~Ga-------~ViV~e~dp--~~a~-~A~~--~G-------~~~-~~leell~~ADI  312 (476)
T PTZ00075        254 GKTVVVCG-YGDVGKGCAQALRGFGA-------RVVVTEIDP--ICAL-QAAM--EG-------YQV-VTLEDVVETADI  312 (476)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCc--hhHH-HHHh--cC-------cee-ccHHHHHhcCCE
Confidence            46999999 79999999999987654       688898874  2211 1111  11       111 246788999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      ||.+.|...               ++.  .+.+... +|++++++++-.
T Consensus       313 VI~atGt~~---------------iI~--~e~~~~M-KpGAiLINvGr~  343 (476)
T PTZ00075        313 FVTATGNKD---------------IIT--LEHMRRM-KNNAIVGNIGHF  343 (476)
T ss_pred             EEECCCccc---------------ccC--HHHHhcc-CCCcEEEEcCCC
Confidence            999865321               110  1233333 467889888754

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=95.11  E-value=0.084  Score=49.48  Aligned_cols=73  Identities=21%  Similarity=0.220  Sum_probs=50.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ...++||| +|..+..-+..+...--+.     +|+++|+++  +..+..+.++....   ...+....+.++|+++||+
T Consensus       130 a~~laiIG-aG~qA~~ql~a~~~v~~~~-----~I~i~~r~~--~~~e~~a~~l~~~~---~~~v~a~~s~~~av~~aDi  198 (330)
T COG2423         130 ASTLAIIG-AGAQARTQLEALKAVRDIR-----EIRVYSRDP--EAAEAFAARLRKRG---GEAVGAADSAEEAVEGADI  198 (330)
T ss_pred             CcEEEEEC-CcHHHHHHHHHHHhhCCcc-----EEEEEcCCH--HHHHHHHHHHHhhc---CccceeccCHHHHhhcCCE
Confidence            45789999 6998887776666532112     899999985  45555555554432   1245556678999999999


Q ss_pred             EEEe
Q 020022           85 AVMV   88 (332)
Q Consensus        85 Vi~~   88 (332)
                      |+.+
T Consensus       199 Ivt~  202 (330)
T COG2423         199 VVTA  202 (330)
T ss_pred             EEEe
Confidence            8876

>PRK13301 putative L-aspartate dehydrogenase; Provisional

Probab=95.10  E-value=0.21  Score=45.17  Aligned_cols=85  Identities=14%  Similarity=0.121  Sum_probs=54.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEE-EEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh-cCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-CTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a-l~~a   82 (332)
                      .+||+||| .|.+|+.++..|.....    ...++ .++|++.  ++.+    .+...       ....+++.+- ....
T Consensus         2 ~~rvgiIG-~GaIG~~va~~l~~~~~----~~~~l~~V~~~~~--~~~~----~~~~~-------~~~~~~l~~ll~~~~   63 (267)
T PRK13301          2 THRIAFIG-LGAIASDVAAGLLADAA----QPCQLAALTRNAA--DLPP----ALAGR-------VALLDGLPGLLAWRP   63 (267)
T ss_pred             ceEEEEEC-ccHHHHHHHHHHhcCCC----CceEEEEEecCCH--HHHH----Hhhcc-------CcccCCHHHHhhcCC
Confidence            46999999 79999999999876432    11233 4466542  2222    22221       1133455553 4789


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCC
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN  124 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~  124 (332)
                      |+||.+|+                ...++++++.+-+.+ .|
T Consensus        64 DlVVE~A~----------------~~av~e~~~~iL~~g-~d   88 (267)
T PRK13301         64 DLVVEAAG----------------QQAIAEHAEGCLTAG-LD   88 (267)
T ss_pred             CEEEECCC----------------HHHHHHHHHHHHhcC-CC
Confidence            99999986                356889999998876 45

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.09  E-value=0.1  Score=45.34  Aligned_cols=35  Identities=31%  Similarity=0.413  Sum_probs=29.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..++|+|+| .|.+|++++..|...|.       +|+.+|+++
T Consensus        27 ~gk~v~I~G-~G~vG~~~A~~L~~~G~-------~Vvv~D~~~   61 (200)
T cd01075          27 EGKTVAVQG-LGKVGYKLAEHLLEEGA-------KLIVADINE   61 (200)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEcCCH
Confidence            347999999 79999999999998764       788999874

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.08  E-value=0.068  Score=45.19  Aligned_cols=55  Identities=16%  Similarity=0.286  Sum_probs=42.0

Q ss_pred             CCcEEEEEcCCCc-hHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQ-IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~-vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ..+||+|+| +|. +|..++..|...+.       ++.+.+++.                          .++.+.+++|
T Consensus        43 ~gk~vlViG-~G~~~G~~~a~~L~~~g~-------~V~v~~r~~--------------------------~~l~~~l~~a   88 (168)
T cd01080          43 AGKKVVVVG-RSNIVGKPLAALLLNRNA-------TVTVCHSKT--------------------------KNLKEHTKQA   88 (168)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhhCCC-------EEEEEECCc--------------------------hhHHHHHhhC
Confidence            347999999 576 58889999987653       578887541                          2456778999


Q ss_pred             cEEEEeCCCC
Q 020022           83 NIAVMVGGFP   92 (332)
Q Consensus        83 DiVi~~ag~~   92 (332)
                      |+||.+.+.+
T Consensus        89 DiVIsat~~~   98 (168)
T cd01080          89 DIVIVAVGKP   98 (168)
T ss_pred             CEEEEcCCCC
Confidence            9999997766

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PLN02494 adenosylhomocysteinase

Probab=95.01  E-value=0.11  Score=50.90  Aligned_cols=90  Identities=12%  Similarity=0.141  Sum_probs=57.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|..++..+...|.       +|..+|+++  .++. .+.  .+.. .      . ....++++.+|+
T Consensus       254 GKtVvViG-yG~IGr~vA~~aka~Ga-------~VIV~e~dp--~r~~-eA~--~~G~-~------v-v~leEal~~ADV  312 (477)
T PLN02494        254 GKVAVICG-YGDVGKGCAAAMKAAGA-------RVIVTEIDP--ICAL-QAL--MEGY-Q------V-LTLEDVVSEADI  312 (477)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCc--hhhH-HHH--hcCC-e------e-ccHHHHHhhCCE
Confidence            47899999 79999999999986653       688899874  2211 111  1111 0      1 135678899999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      ||.+.|...               ++.  .+.+... ++++++++++-+
T Consensus       313 VI~tTGt~~---------------vI~--~e~L~~M-K~GAiLiNvGr~  343 (477)
T PLN02494        313 FVTTTGNKD---------------IIM--VDHMRKM-KNNAIVCNIGHF  343 (477)
T ss_pred             EEECCCCcc---------------chH--HHHHhcC-CCCCEEEEcCCC
Confidence            998765321               110  1233333 467899999875

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=95.00  E-value=0.084  Score=44.66  Aligned_cols=109  Identities=16%  Similarity=0.170  Sum_probs=65.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh-----hhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-----ALNGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-----~l~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      .++...|+||+|-.|+.+...++..+.|+     .++++-+.+-.+     .+.....|++..           .+..++
T Consensus        17 q~~s~fvlGAtG~~G~~llk~~~E~~~FS-----KV~~i~RR~~~d~at~k~v~q~~vDf~Kl-----------~~~a~~   80 (238)
T KOG4039|consen   17 QNMSGFVLGATGLCGGGLLKHAQEAPQFS-----KVYAILRRELPDPATDKVVAQVEVDFSKL-----------SQLATN   80 (238)
T ss_pred             hccceEEEeccccccHHHHHHHHhcccce-----eEEEEEeccCCCccccceeeeEEechHHH-----------HHHHhh
Confidence            45678999999999999999999999988     666665542110     011112233222           245677


Q ss_pred             cCCCcEEEEeCCCCC-CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           79 CTGVNIAVMVGGFPR-KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        79 l~~aDiVi~~ag~~~-~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      ..+.|+.+++-|..| +.|-  +.+....-+.+.+.++..++-+.+ .++++.|
T Consensus        81 ~qg~dV~FcaLgTTRgkaGa--dgfykvDhDyvl~~A~~AKe~Gck-~fvLvSS  131 (238)
T KOG4039|consen   81 EQGPDVLFCALGTTRGKAGA--DGFYKVDHDYVLQLAQAAKEKGCK-TFVLVSS  131 (238)
T ss_pred             hcCCceEEEeeccccccccc--CceEeechHHHHHHHHHHHhCCCe-EEEEEec
Confidence            899999999888776 3332  122233334444556655555433 3444444

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=94.99  E-value=0.065  Score=51.96  Aligned_cols=73  Identities=14%  Similarity=0.129  Sum_probs=50.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+|+| +|.+|..++..|...|. .     +|.++.++.  ++++..+..+..      .......++.+.+.++|+
T Consensus       181 ~kkvlviG-aG~~a~~va~~L~~~g~-~-----~I~V~nRt~--~ra~~La~~~~~------~~~~~~~~l~~~l~~aDi  245 (414)
T PRK13940        181 SKNVLIIG-AGQTGELLFRHVTALAP-K-----QIMLANRTI--EKAQKITSAFRN------ASAHYLSELPQLIKKADI  245 (414)
T ss_pred             CCEEEEEc-CcHHHHHHHHHHHHcCC-C-----EEEEECCCH--HHHHHHHHHhcC------CeEecHHHHHHHhccCCE
Confidence            46999999 69999999999988764 2     699999873  333333222211      112222456788999999


Q ss_pred             EEEeCCCC
Q 020022           85 AVMVGGFP   92 (332)
Q Consensus        85 Vi~~ag~~   92 (332)
                      ||.+-+.|
T Consensus       246 VI~aT~a~  253 (414)
T PRK13940        246 IIAAVNVL  253 (414)
T ss_pred             EEECcCCC
Confidence            99987765

>PLN02858 fructose-bisphosphate aldolase

Probab=94.97  E-value=0.14  Score=56.82  Aligned_cols=66  Identities=14%  Similarity=0.184  Sum_probs=48.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ...||++|| .|.||+.++..|+..|.       ++..||+++  ++.+    ++.+..      ........++.++||
T Consensus         3 ~~~~IGfIG-LG~MG~~mA~~L~~~G~-------~v~v~dr~~--~~~~----~l~~~G------a~~~~s~~e~a~~ad   62 (1378)
T PLN02858          3 SAGVVGFVG-LDSLSFELASSLLRSGF-------KVQAFEIST--PLME----KFCELG------GHRCDSPAEAAKDAA   62 (1378)
T ss_pred             CCCeEEEEc-hhHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHcC------CeecCCHHHHHhcCC
Confidence            346899999 89999999999998763       799999974  3332    233211      123346778889999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +||++.
T Consensus        63 vVi~~l   68 (1378)
T PLN02858         63 ALVVVL   68 (1378)
T ss_pred             EEEEEc
Confidence            999984

>PLN03129 NADP-dependent malic enzyme; Provisional

Probab=94.96  E-value=0.098  Score=52.27  Aligned_cols=119  Identities=17%  Similarity=0.256  Sum_probs=71.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc-----ccCCCCCc-eEEEEEeCCCchhhhhhhHHH-HhhhhcCCccceEeeCChhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG-----VMLGTDQP-VILHMLDIPPAAEALNGVKME-LVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-----~~~~~~~~-~ei~L~D~~~~~~~l~~~~~d-l~~~~~~~~~~~~~~~~~~~a   78 (332)
                      .||.+.| +|..|..++.+|...     |+ +.++. -.+.++|.+.   .+.....| +.+...++.+......++.++
T Consensus       322 ~riv~~G-AGsAgigia~ll~~~~~~~~Gl-s~eeA~~~i~~vD~~G---Li~~~r~~~l~~~k~~fa~~~~~~~~L~e~  396 (581)
T PLN03129        322 QRILFAG-AGEAGTGIAELIALAMSRQTGI-SEEEARKRIWLVDSKG---LVTKSRKDSLQPFKKPFAHDHEPGASLLEA  396 (581)
T ss_pred             ceEEEEC-CCHHHHHHHHHHHHHHHhhcCC-ChhhhcCcEEEEcCCC---eEeCCCCccChHHHHHHHhhcccCCCHHHH
Confidence            6999999 699999999888763     43 11111 1689999763   22111111 222111111111123579999


Q ss_pred             cCC--CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc---cchHHHHHHh
Q 020022           79 CTG--VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA---NTNALILKEF  144 (332)
Q Consensus        79 l~~--aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~---~~~~~~~~~~  144 (332)
                      +++  +|++|=+.+.+   |-           +.+++++.+.+++ +..+|.-.|||.   .+...-+.+.
T Consensus       397 v~~vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~-~rPIIFaLSNPt~~~E~~pe~a~~~  452 (581)
T PLN03129        397 VKAIKPTVLIGLSGVG---GT-----------FTKEVLEAMASLN-ERPIIFALSNPTSKAECTAEEAYTW  452 (581)
T ss_pred             HhccCCCEEEEecCCC---CC-----------CCHHHHHHHHhcC-CCCEEEECCCCCCCcCcCHHHHHHh
Confidence            999  89988765543   21           2346777777787 456677789997   4555555554

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.96  E-value=0.11  Score=42.59  Aligned_cols=56  Identities=20%  Similarity=0.264  Sum_probs=43.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.++|+|+|.+..+|..++..|...+.       ++.+.+.+.                          .+..+++++||
T Consensus        27 ~gk~v~VvGrs~~vG~pla~lL~~~ga-------tV~~~~~~t--------------------------~~l~~~v~~AD   73 (140)
T cd05212          27 DGKKVLVVGRSGIVGAPLQCLLQRDGA-------TVYSCDWKT--------------------------IQLQSKVHDAD   73 (140)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeCCCC--------------------------cCHHHHHhhCC
Confidence            357999999888999999999987653       677776431                          14566789999


Q ss_pred             EEEEeCCCC
Q 020022           84 IAVMVGGFP   92 (332)
Q Consensus        84 iVi~~ag~~   92 (332)
                      +||.+.|.+
T Consensus        74 IVvsAtg~~   82 (140)
T cd05212          74 VVVVGSPKP   82 (140)
T ss_pred             EEEEecCCC
Confidence            999998866

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PLN00203 glutamyl-tRNA reductase

Probab=94.95  E-value=0.15  Score=50.85  Aligned_cols=75  Identities=17%  Similarity=0.221  Sum_probs=48.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ..||+|+| +|.+|..++..|...|. .     +|.+++++.  +++......+...    ...+....+..+++.++|+
T Consensus       266 ~kkVlVIG-AG~mG~~~a~~L~~~G~-~-----~V~V~nRs~--era~~La~~~~g~----~i~~~~~~dl~~al~~aDV  332 (519)
T PLN00203        266 SARVLVIG-AGKMGKLLVKHLVSKGC-T-----KMVVVNRSE--ERVAALREEFPDV----EIIYKPLDEMLACAAEADV  332 (519)
T ss_pred             CCEEEEEe-CHHHHHHHHHHHHhCCC-C-----eEEEEeCCH--HHHHHHHHHhCCC----ceEeecHhhHHHHHhcCCE
Confidence            57999999 69999999999887663 2     689999874  4443322222110    0011122356788999999


Q ss_pred             EEEeCCCC
Q 020022           85 AVMVGGFP   92 (332)
Q Consensus        85 Vi~~ag~~   92 (332)
                      ||.+-+.+
T Consensus       333 VIsAT~s~  340 (519)
T PLN00203        333 VFTSTSSE  340 (519)
T ss_pred             EEEccCCC
Confidence            98875443

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.95  E-value=0.083  Score=44.18  Aligned_cols=66  Identities=26%  Similarity=0.313  Sum_probs=42.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      -++++|+| -|.+|+.+|..|...|.       .+..+|+++- ..+++ .+   +.       +... ...++++.+|+
T Consensus        23 Gk~vvV~G-YG~vG~g~A~~lr~~Ga-------~V~V~e~DPi-~alqA-~~---dG-------f~v~-~~~~a~~~adi   81 (162)
T PF00670_consen   23 GKRVVVIG-YGKVGKGIARALRGLGA-------RVTVTEIDPI-RALQA-AM---DG-------FEVM-TLEEALRDADI   81 (162)
T ss_dssp             TSEEEEE---SHHHHHHHHHHHHTT--------EEEEE-SSHH-HHHHH-HH---TT--------EEE--HHHHTTT-SE
T ss_pred             CCEEEEeC-CCcccHHHHHHHhhCCC-------EEEEEECChH-HHHHh-hh---cC-------cEec-CHHHHHhhCCE
Confidence            36899999 79999999999998774       7999999851 11211 11   22       1222 47889999999


Q ss_pred             EEEeCCC
Q 020022           85 AVMVGGF   91 (332)
Q Consensus        85 Vi~~ag~   91 (332)
                      +|.+-|.
T Consensus        82 ~vtaTG~   88 (162)
T PF00670_consen   82 FVTATGN   88 (162)
T ss_dssp             EEE-SSS
T ss_pred             EEECCCC
Confidence            9887664

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.88  E-value=0.16  Score=46.19  Aligned_cols=73  Identities=12%  Similarity=0.059  Sum_probs=46.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++++|+| +|.+|.+++..|+..+.       ++.++|+++  ++++..+.++...  .   .....+.....+.++|+
T Consensus       117 ~k~vliiG-aGg~g~aia~~L~~~g~-------~v~v~~R~~--~~~~~la~~~~~~--~---~~~~~~~~~~~~~~~Di  181 (270)
T TIGR00507       117 NQRVLIIG-AGGAARAVALPLLKADC-------NVIIANRTV--SKAEELAERFQRY--G---EIQAFSMDELPLHRVDL  181 (270)
T ss_pred             CCEEEEEc-CcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhhc--C---ceEEechhhhcccCccE
Confidence            46899999 59999999999987652       688999874  4444333333221  0   11122222234568999


Q ss_pred             EEEeCCCC
Q 020022           85 AVMVGGFP   92 (332)
Q Consensus        85 Vi~~ag~~   92 (332)
                      ||.+.+..
T Consensus       182 vInatp~g  189 (270)
T TIGR00507       182 IINATSAG  189 (270)
T ss_pred             EEECCCCC
Confidence            99987654

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=94.85  E-value=0.082  Score=50.06  Aligned_cols=34  Identities=21%  Similarity=0.375  Sum_probs=26.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEE-EEeCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIP   45 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~   45 (332)
                      +||+|+||+|.+|..++..|.....      .+++ +++.+
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~------~el~~l~~s~   35 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPE------VEITYLVSSR   35 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEeccc
Confidence            5899999999999999999886532      1566 66654

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=94.83  E-value=0.09  Score=48.32  Aligned_cols=76  Identities=17%  Similarity=0.122  Sum_probs=47.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+++.|+| +|.+|.+++..|+..|. .     +|.+++++.  ++++..+.++.... . ...+....+..+.+.++|+
T Consensus       125 ~k~vlvlG-aGGaarai~~aL~~~G~-~-----~i~I~nRt~--~ka~~La~~~~~~~-~-~~~~~~~~~~~~~~~~~Di  193 (282)
T TIGR01809       125 GFRGLVIG-AGGTSRAAVYALASLGV-T-----DITVINRNP--DKLSRLVDLGVQVG-V-ITRLEGDSGGLAIEKAAEV  193 (282)
T ss_pred             CceEEEEc-CcHHHHHHHHHHHHcCC-C-----eEEEEeCCH--HHHHHHHHHhhhcC-c-ceeccchhhhhhcccCCCE
Confidence            46899999 69999999999998774 2     699999873  45544443332110 0 0011000123355688999


Q ss_pred             EEEeCCC
Q 020022           85 AVMVGGF   91 (332)
Q Consensus        85 Vi~~ag~   91 (332)
                      ||.+-..
T Consensus       194 VInaTp~  200 (282)
T TIGR01809       194 LVSTVPA  200 (282)
T ss_pred             EEECCCC
Confidence            9997443

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.83  E-value=0.17  Score=44.92  Aligned_cols=35  Identities=34%  Similarity=0.466  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..||+|+| +|.+|+.++..|+..|+ +     +++|+|-+.
T Consensus        21 ~~~VlivG-~GglGs~va~~La~~Gv-g-----~i~lvD~D~   55 (228)
T cd00757          21 NARVLVVG-AGGLGSPAAEYLAAAGV-G-----KLGLVDDDV   55 (228)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCC-C-----EEEEEcCCE
Confidence            46999999 79999999999999886 4     799998653

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=94.82  E-value=0.099  Score=46.95  Aligned_cols=75  Identities=23%  Similarity=0.302  Sum_probs=48.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      ++|.|+||+|++|++++..|+..+.       +++..-+++  +.+....   .... ....++.....+..+++|.|.+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~-------~v~~~~r~~--~~~~~~~---~~v~-~~~~d~~~~~~l~~a~~G~~~~   67 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGH-------EVRAAVRNP--EAAAALA---GGVE-VVLGDLRDPKSLVAGAKGVDGV   67 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCC-------EEEEEEeCH--HHHHhhc---CCcE-EEEeccCCHhHHHHHhccccEE
Confidence            4899999999999999999998752       666666653  3332211   0110 0011222233567889999999


Q ss_pred             EEeCCCCC
Q 020022           86 VMVGGFPR   93 (332)
Q Consensus        86 i~~ag~~~   93 (332)
                      ++..+...
T Consensus        68 ~~i~~~~~   75 (275)
T COG0702          68 LLISGLLD   75 (275)
T ss_pred             EEEecccc
Confidence            99876543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	332
4mdh_A	334	Refined Crystal Structure Of Cytoplasmic Malate Deh		1e-111
5mdh_A	333	Crystal Structure Of Ternary Complex Of Porcine Cyt		1e-111
1iz9_A	327	Crystal Structure Of Malate Dehydrogenase From Ther		2e-91
1bmd_A	327	Determinants Of Protein Thermostability Observed In		3e-91
4h7p_A	345	Crystal Structure Of A Putative Cytosolic Malate De		6e-91
1bdm_A	327	The Structure At 1.8 Angstroms Resolution Of A Sing		9e-91
1b8p_A	329	Malate Dehydrogenase From Aquaspirillum Arcticum Le		2e-90
1wze_A	327	Structural Basis For Alteration Of Cofactor Specifi		6e-89
3d5t_A	331	Crystal Structure Of Malate Dehydrogenase From Burk		7e-89
1civ_A	385	Chloroplast Nadp-Dependent Malate Dehydrogenase Fro		3e-61
7mdh_A	375	Structural Basis For Light Acitvation Of A Chloropl		5e-61
3fi9_A	343	Crystal Structure Of Malate Dehydrogenase From Porp		9e-16
3gvh_A	324	Crystal Structure Of LactateMALATE DEHYDROGENASE FR		1e-11
3nep_X	314	1.55a Resolution Structure Of Malate Dehydrogenase		6e-10
1mld_A	314	Refined Structure Of Mitochondrial Malate Dehydroge		4e-08
2dfd_A	342	Crystal Structure Of Human Malate Dehydrogenase Typ		4e-08
1hyg_A	313	Crystal Structure Of Mj0490 Gene Product, The Famil		2e-07
1smk_A	326	Mature And Translocatable Forms Of Glyoxysomal Mala		2e-07
1sev_A	362	Mature And Translocatable Forms Of Glyoxysomal Mala		2e-07
1gv1_A	310	Structural Basis For Thermophilic Protein Stability		3e-07
1guz_A	310	Structural Basis For Thermophilic Protein Stability		4e-07
1gv0_A	310	Structural Basis For Thermophilic Protein Stability		7e-07
2hjr_A	328	Crystal Structure Of Cryptosporidium Parvum Malate		8e-07
2pwz_A	312	Crystal Structure Of The Apo Form Of E.Coli Malate		9e-07
3p7m_A	321	Structure Of Putative Lactate Dehydrogenase From Fr		1e-06
1emd_A	312	Crystal Structure Of A Ternary Complex Of Escherich		1e-06
4e0b_A	313	2.17 Angstrom Resolution Crystal Structure Of Malat		3e-06
1ez4_A	318	Crystal Structure Of Non-Allosteric L-Lactate Dehyd		4e-06
1ib6_A	312	Crystal Structure Of R153c E. Coli Malate Dehydroge		6e-06
2v65_A	331	Apo Ldh From The Psychrophile C. Gunnari Length = 3		7e-06
1y6j_A	318	L-Lactate Dehydrogenase From Clostridium Thermocell		1e-05
1v6a_A	332	Crystal Structure Of L-Lactate Dehydrogenase From C		2e-05
2j5k_A	304	2.0 A Resolution Structure Of The Wild Type Malate		2e-05
1o6z_A	303	1.95 A Resolution Structure Of (r207s,r292s) Mutant		2e-05
1hlp_A	303	Structural Features Stabilizing Halophilic Malate D		2e-05
2x0r_A	304	R207s,R292s Mutant Of Malate Dehydrogenase From The		2e-05
2hlp_A	303	Crystal Structure Of The E267r Mutant Of A Halophil		2e-05
1uxh_A	309	Large Improvement In The Thermal Stability Of A Tet		2e-05
1guy_A	309	Structural Basis For Thermophilic Protein Stability		2e-05
1uxi_A	309	Large Improvement In The Thermal Stability Of A Tet		2e-05
2x0i_A	294	2.9 A Resolution Structure Of Malate Dehydrogenase		3e-05
3pqd_A	326	Crystal Structure Of L-Lactate Dehydrogenase From B		5e-05
1llc_A	325	Structure Determination Of The Allosteric L-Lactate		7e-05
6ldh_A	330	Refined Crystal Structure Of Dogfish M4 Apo-Lactate		7e-05
1ldm_A	329	Refined Crystal Structure Of Dogfish M4 Apo-Lactate		7e-05
5ldh_A	334	Structure Of The Active Ternary Complex Of Pig Hear		8e-05
2ldx_A	331	Characterization Of The Antigenic Sites On The Refi		8e-05
2zqy_A	326	T-State Structure Of Allosteric L-Lactate Dehydroge		9e-05
9ldt_A	332	Design And Synthesis Of New Enzymes Based On The La		1e-04
3pqe_A	326	Crystal Structure Of L-Lactate Dehydrogenase From B		1e-04
3vku_A	326	Penta Mutant Of Lactobacillus Casei Lactate Dehydro		1e-04
1ur5_A	309	Stabilization Of A Tetrameric Malate Dehydrogenase		1e-04
3h3f_A	331	Rabbit Muscle L-Lactate Dehydrogenase In Complex Wi		3e-04
1i10_A	331	Human Muscle L-Lactate Dehydrogenase M Chain, Terna		3e-04
4ajp_A	337	Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-		3e-04
1i0z_A	333	Human Heart L-Lactate Dehydrogenase H Chain, Ternar		5e-04
1t2f_A	333	Human B Lactate Dehydrogenase Complexed With Nad+ A		5e-04
2a92_A	321	Crystal Structure Of Lactate Dehydrogenase From Pla		8e-04

>pdb|4MDH|A Chain A, Refined Crystal Structure Of Cytoplasmic Malate Dehydrogenase At 2.5-Angstroms Resolution Length = 334

Iteration: 1
 Score =  397 bits (1021), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/330 (58%), Positives = 239/330 (72%), Gaps = 1/330 (0%)
Query: 4   EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
           EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct: 3   EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 62
Query: 64  PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
           PLLK V+AT     A   +++A++VG  PR++GMERKD++  NV I+K Q +AL+++A  
Sbjct: 63  PLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKK 122
Query: 124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
           + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V   DVKNVI
Sbjct: 123 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVI 182
Query: 184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXX 243
           IWGNHSS+QYPDVNHA V   A E  V E VKDD+WL GEFITTVQQRGAA+IKARK   
Sbjct: 183 IWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARKLSS 242
Query: 244 XXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
                   CDH+RD   GTPEG +VSMG+ SDG SY VP  L+YSFPVT ++  W IV+G
Sbjct: 243 AMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEG 302
Query: 303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           L I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct: 303 LPINDFSREKMDLTAKELAEEKETAFEFLS 332

>pdb|5MDH|A Chain A, Crystal Structure Of Ternary Complex Of Porcine Cytoplasmic Malate Dehydrogenase Alpha-Ketomalonate And Tnad At 2.4 Angstroms Resolution Length = 333

Iteration: 1
 Score =  397 bits (1021), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/330 (58%), Positives = 239/330 (72%), Gaps = 1/330 (0%)
Query: 4   EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
           EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct: 2   EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 61
Query: 64  PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
           PLLK V+AT     A   +++A++VG  PR++GMERKD++  NV I+K Q +AL+++A  
Sbjct: 62  PLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKK 121
Query: 124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
           + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V   DVKNVI
Sbjct: 122 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVI 181
Query: 184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXX 243
           IWGNHSS+QYPDVNHA V   A E  V E VKDD+WL GEFITTVQQRGAA+IKARK   
Sbjct: 182 IWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARKLSS 241
Query: 244 XXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
                   CDH+RD   GTPEG +VSMG+ SDG SY VP  L+YSFPVT ++  W IV+G
Sbjct: 242 AMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEG 301
Query: 303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           L I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct: 302 LPINDFSREKMDLTAKELAEEKETAFEFLS 331

>pdb|1IZ9|A Chain A, Crystal Structure Of Malate Dehydrogenase From Thermus Thermophilus Hb8 Length = 327

Iteration: 1
 Score =  332 bits (851), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/321 (52%), Positives = 216/321 (67%), Gaps = 5/321 (1%)
Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           K PVRV VTGAAGQIGY+L+  IA G MLG DQPVIL +L+IP A +AL GV MEL D A
Sbjct: 2   KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA 61
Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           FPLL G+ AT D   A    + A++VG  PRK GMER+D++  N  I+  Q  AL + A 
Sbjct: 62  FPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAK 121
Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182
            + KVLVV NPANTNALI  + AP +  +N T +TRLDHNRA  Q+++K    V  ++ +
Sbjct: 122 KDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRM 181
Query: 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXX 242
            +WGNHSS+ +PD+ HA V+     +P  ELV D  W    FI TV QRGAAII+AR   
Sbjct: 182 TVWGNHSSTMFPDLFHAEVDG----RPALELV-DMEWYEKVFIPTVAQRGAAIIQARGAS 236
Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQG 302
                     +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+G
Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEG 296
Query: 303 LSIDEFSRKKLDLTAEELSEE 323
           L I+EF+RK++++TA+EL +E
Sbjct: 297 LEINEFARKRMEITAQELLDE 317

>pdb|1BMD|A Chain A, Determinants Of Protein Thermostability Observed In The 1.9 Angstroms Crystal Structure Of Malate Dehydrogenase From The Thermophilic Bacterium Thermus Flavus Length = 327

Iteration: 1
 Score =  332 bits (850), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 167/321 (52%), Positives = 216/321 (67%), Gaps = 5/321 (1%)
Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           K PVRV VTGAAGQIGY+L+  IA G MLG DQPVIL +L+IP A +AL GV MEL D A
Sbjct: 2   KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA 61
Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           FPLL G+ AT D   A    + A++VG  PRK GMER+D++  N  I+  Q  AL + A 
Sbjct: 62  FPLLAGLEATDDPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAK 121
Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182
            + KVLVV NPANTNALI  + AP +  +N T +TRLDHNRA  Q+++K    V  ++ +
Sbjct: 122 KDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRM 181
Query: 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXX 242
            +WGNHSS+ +PD+ HA V+     +P  ELV D  W    FI TV QRGAAII+AR   
Sbjct: 182 TVWGNHSSTMFPDLFHAEVDG----RPALELV-DMEWYEKVFIPTVAQRGAAIIQARGAS 236
Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQG 302
                     +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+G
Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEG 296
Query: 303 LSIDEFSRKKLDLTAEELSEE 323
           L I+EF+RK++++TA+EL +E
Sbjct: 297 LEINEFARKRMEITAQELLDE 317

>pdb|4H7P|A Chain A, Crystal Structure Of A Putative Cytosolic Malate Dehydrogenase From Leishmania Major Friedlin Length = 345

Iteration: 1
 Score =  330 bits (846), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 173/324 (53%), Positives = 215/324 (66%), Gaps = 7/324 (2%)
Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
           V+V VTGAAGQIGYALVP+IARG +LG   PV L +LDI PA +AL GV+ EL D AFPL
Sbjct: 25  VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPL 84
Query: 66  LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC 125
           L  VV T D   A  GV IA+M G FPRK GMERKD++  N  I+K Q  A+   AA +C
Sbjct: 85  LDKVVVTADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDC 144
Query: 126 KVLVVANPANTNALI-LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVII 184
           +V+VV NPANTNALI LK     +  +++T +TRLDHNRAL  ++ K  V VS V+NVII
Sbjct: 145 RVVVVGNPANTNALILLKSAQGKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVII 204
Query: 185 WGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXX 244
           WGNHSS+Q PD + A + T     P RE +KDDA L+ +F+  V+ RGA II+ R     
Sbjct: 205 WGNHSSTQVPDTDSAVIGTT----PAREAIKDDA-LDDDFVQVVRGRGAEIIQLRGLSSA 259
Query: 245 XXXXXXXCDHIRDWVLGTPEGTWVSMGVYSD-GSYNVPAGLIYSFPVTCRNGEWTIVQGL 303
                   DH+ DW+ GTPEG +VSMGVYSD   Y VP+GLI+SFP TC  GEWT+V G 
Sbjct: 260 MSAAKAAVDHVHDWIHGTPEGVYVSMGVYSDENPYGVPSGLIFSFPCTCHAGEWTVVSGK 319
Query: 304 SIDEFSRKKLDLTAEELSEEKALA 327
              +  +++L  T  EL EE+A A
Sbjct: 320 LNGDLGKQRLASTIAELQEERAQA 343

>pdb|1BDM|A Chain A, The Structure At 1.8 Angstroms Resolution Of A Single Site Mutant (T189i) Of Malate Dehydrogenase From Thermus Flavus With Increased Enzymatic Activity Length = 327

Iteration: 1
 Score =  330 bits (845), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 167/321 (52%), Positives = 215/321 (66%), Gaps = 5/321 (1%)
Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           K PVRV VTGAAGQIGY+L+  IA G MLG DQPVIL +L+IP A +AL GV MEL D A
Sbjct: 2   KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA 61
Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           FPLL G+ AT D   A    + A++VG  PRK GMER+D++  N  I+  Q  AL + A 
Sbjct: 62  FPLLAGLEATDDPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAK 121
Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182
            + KVLVV NPANTNALI  + AP +  +N T +TRLDHNRA  Q+++K    V  ++ +
Sbjct: 122 KDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRM 181
Query: 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXX 242
            +WGNHSS  +PD+ HA V+     +P  ELV D  W    FI TV QRGAAII+AR   
Sbjct: 182 TVWGNHSSIMFPDLFHAEVDG----RPALELV-DMEWYEKVFIPTVAQRGAAIIQARGAS 236
Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQG 302
                     +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+G
Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEG 296
Query: 303 LSIDEFSRKKLDLTAEELSEE 323
           L I+EF+RK++++TA+EL +E
Sbjct: 297 LEINEFARKRMEITAQELLDE 317

>pdb|1B8P|A Chain A, Malate Dehydrogenase From Aquaspirillum Arcticum Length = 329

Iteration: 1
 Score =  329 bits (843), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 167/326 (51%), Positives = 218/326 (66%), Gaps = 7/326 (2%)
Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMEL 58
           MAK P+RV VTGAAGQI Y+L+  IA G MLG DQPVIL +L+IP   A +AL GV ME+
Sbjct: 1   MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEI 60
Query: 59  VDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALE 118
            D AFPLL G+ A  D + A    ++A++VG  PR  GMERKD++  N  I+  Q  A++
Sbjct: 61  DDCAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAID 120
Query: 119 QHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSD 178
             A+ N KVLVV NPANTNA I  + APS+PAKN T + RLDHNRAL QI+ K    VS 
Sbjct: 121 AVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSS 180
Query: 179 VKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA 238
           ++ + +WGNHS + Y D  +A ++ A+    V++++ DDAW    F+ TV +RGAAII A
Sbjct: 181 IEKLFVWGNHSPTMYADYRYAQIDGAS----VKDMINDDAWNRDTFLPTVGKRGAAIIDA 236
Query: 239 RKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWT 298
           R             DHI DWVLGT  G W +MG+ SDGSY +P G+I+ FPVT  NGE+ 
Sbjct: 237 RGVSSAASAANAAIDHIHDWVLGT-AGKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYK 295
Query: 299 IVQGLSIDEFSRKKLDLTAEELSEEK 324
           IVQGLSID FS++++++T  EL EE+
Sbjct: 296 IVQGLSIDAFSQERINVTLNELLEEQ 321

>pdb|1WZE|A Chain A, Structural Basis For Alteration Of Cofactor Specificity Of Malate Dehydrogenase From Thermus Flavus Length = 327

Iteration: 1
 Score =  323 bits (829), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 164/321 (51%), Positives = 213/321 (66%), Gaps = 5/321 (1%)
Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           K PVRV VTGAAGQIGY+L+  IA G MLG DQPVIL +L    + +AL GV MEL D A
Sbjct: 2   KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLGSERSFQALEGVVMELEDCA 61
Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           FPLL G+ AT D   A    + A++VG  PRK GMER+D++  N  I+  Q  AL + A 
Sbjct: 62  FPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAK 121
Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182
            + KVLVV NPANTNALI  + AP +  +N T +TRLDHNRA  Q+++K    V  ++ +
Sbjct: 122 KDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRM 181
Query: 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXX 242
            +WGNHSS+ +PD+ HA V+     +P  ELV D  W    FI TV QRGAAII+AR   
Sbjct: 182 TVWGNHSSTMFPDLFHAEVDG----RPALELV-DMEWYEKVFIPTVAQRGAAIIQARGAS 236
Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQG 302
                     +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+G
Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEG 296
Query: 303 LSIDEFSRKKLDLTAEELSEE 323
           L I+EF+RK++++TA+EL +E
Sbjct: 297 LEINEFARKRMEITAQELLDE 317

>pdb|3D5T|A Chain A, Crystal Structure Of Malate Dehydrogenase From Burkholderia Pseudomallei Length = 331

Iteration: 1
 Score =  323 bits (828), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 168/324 (51%), Positives = 212/324 (65%), Gaps = 5/324 (1%)
Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           MAK   RV VTGAAGQI Y+L+  IA G +LG DQPVIL +LD+P A  A+ GV MEL D
Sbjct: 5   MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQAAVKGVVMELDD 64
Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
            AFPLL GVV T D   A    ++A++VG  PR +GMERKD++S N  I+  Q +AL + 
Sbjct: 65  CAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEV 124
Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           A+ + KVLVV NPANTNA I  + AP +P KN T + RLDHNRAL Q++ K    V+ ++
Sbjct: 125 ASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIE 184
Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
            + +WGNHS + YPD   A   TA GE  ++ L+ DD W    FI TV +RGAAII+AR 
Sbjct: 185 KLAVWGNHSPTMYPDFRFA---TAEGESLLK-LINDDVWNRDTFIPTVGKRGAAIIEARG 240
Query: 241 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIV 300
                       DH+RDWVLGT  G WV+MG+ SDGSY +P  +IY  PV C NGE+  V
Sbjct: 241 LSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVICENGEYKRV 299
Query: 301 QGLSIDEFSRKKLDLTAEELSEEK 324
           +GL ID FSR+K+D T  EL EE+
Sbjct: 300 EGLEIDAFSREKMDGTLAELLEER 323

>pdb|1CIV|A Chain A, Chloroplast Nadp-Dependent Malate Dehydrogenase From Flaveria Bidentis Length = 385

Iteration: 1
 Score =  232 bits (591), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 187/331 (56%), Gaps = 11/331 (3%)
Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           K+ + V V+GAAG I   L+  +A G + G DQP+ L +L    +  AL GV MEL D+ 
Sbjct: 40  KKIINVAVSGAAGMISNHLLFKLASGEVFGPDQPISLKLLGSERSFAALEGVAMELEDSL 99
Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           +PLL+ V    D  E       A+++G  PR  GMER D++  N  I+  Q  AL   A+
Sbjct: 100 YPLLRQVSIGIDPYEIFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNAVAS 159
Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182
           PN KV+VV NP NTNALI  + AP+IP KN   LTRLD NRA  Q++ K  V    V NV
Sbjct: 160 PNVKVMVVGNPCNTNALICLKNAPNIPPKNFHALTRLDENRAKCQLALKAGVFYDKVSNV 219
Query: 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXX 242
            IWGNHS++Q PD  +A ++      PV E+++D  WL  EF   VQ RG  +IK     
Sbjct: 220 TIWGNHSTTQVPDFLNAKIHGI----PVTEVIRDRKWLEDEFTNMVQTRGGVLIKKWGRS 275
Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCR---NGEWT 298
                     D IR  V  TPEG W S GVY++G+ Y +   +++S P  CR   +G++ 
Sbjct: 276 SAASTAVSIVDAIRSLVTPTPEGDWFSTGVYTNGNPYGIAEDIVFSMP--CRSKGDGDYE 333
Query: 299 IVQGLSIDEFSRKKLDLTAEE-LSEEKALAY 328
            V+ +  D++  KK+  + +E L+E+K +A+
Sbjct: 334 FVKDVIFDDYLSKKIKKSEDELLAEKKCVAH 364

>pdb|7MDH|A Chain A, Structural Basis For Light Acitvation Of A Chloroplast Enzyme. The Structure Of Sorghum Nadp-Malate Dehydrogenase In Its Oxidized Form Length = 375

Iteration: 1
 Score =  231 bits (589), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 191/331 (57%), Gaps = 11/331 (3%)
Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           K+ V + V+GAAG I   L+  +A G + G DQP+ L +L    + +AL GV MEL D+ 
Sbjct: 30  KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL 89
Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           +PLL+ V    D  E    V+ A+++G  PR  GMER  ++  N  I+  Q  AL   A+
Sbjct: 90  YPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVAS 149
Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182
            N KVLVV NP NTNALI  + AP IPAKN   LTRLD NRA  Q++ K  V    V NV
Sbjct: 150 KNVKVLVVGNPCNTNALICLKNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNV 209
Query: 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXX 242
            IWGNHS++Q PD  +A ++     +PV+E++K   WL  EF  TVQ+RG A+I+     
Sbjct: 210 TIWGNHSTTQVPDFLNAKIDG----RPVKEVIKRTKWLEEEFTITVQKRGGALIQKWGRS 265
Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCR---NGEWT 298
                     D I+  V  TPEG W S GVY+ G+ Y +   +++S P  CR   +G++ 
Sbjct: 266 SAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMP--CRSKGDGDYE 323
Query: 299 IVQGLSIDEFSRKKLDLT-AEELSEEKALAY 328
           +   +S D+F  +++  + AE L+E+K +A+
Sbjct: 324 LATDVSNDDFLWERIKKSEAELLAEKKCVAH 354

>pdb|3FI9|A Chain A, Crystal Structure Of Malate Dehydrogenase From Porphyromonas Gingivalis Length = 343

Iteration: 1
 Score = 80.9 bits (198), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 119/272 (43%), Gaps = 22/272 (8%)
Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           ++ + GAAG IG  +    A   M+     + L+     P A  L GV  E+    F  L
Sbjct: 10  KLTIVGAAGMIGSNMAQTAA---MMRLTPNLCLY----DPFAVGLEGVAEEIRHCGFEGL 62
Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
             +  T+D  EA T     V  GG PRKEGM R+D++  N  I  AQ     +   P+CK
Sbjct: 63  N-LTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEI-AAQLGKDIKSYCPDCK 120
Query: 127 -VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIW 185
            V+++ NPA+   L+   ++   P++ +T L  LD  R   ++++   ++ S V N   +
Sbjct: 121 HVIIIFNPADITGLVTLIYSGLKPSQ-VTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTY 179
Query: 186 GNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLN---GEFITTVQQRGAAIIKARKXX 242
           G H        + A VN      P+ +L+  D   N    E    V + GA IIK R   
Sbjct: 180 GGHGEQMAVFASTAKVNGT----PLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLRGRS 235
Query: 243 XXXXXXXXXCDHIRDWVLGT----PEGTWVSM 270
                     + IR  + G     P G +V++
Sbjct: 236 SFQSPSYVSIEMIRAAMGGEAFRWPAGCYVNV 267

>pdb|3GVH|A Chain A, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM Brucella Melitensis Length = 324

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 78  ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN 137
           A  G ++ ++  G PRK GM R D++  N+ + +   + ++++ AP   V+ + NP +  
Sbjct: 72  AIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVICITNPLDAM 130
Query: 138 ALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDV 196
              L++F+  +PA  +  +   LD  R    +SE+ NV V DV  V + G H  S  P  
Sbjct: 131 VWALQKFS-GLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDV-TVFVLGGHGDSMVPLA 188
Query: 197 NHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQR 231
            ++TV       P+ +LVK   W + + +  + QR
Sbjct: 189 RYSTVAGI----PLPDLVK-MGWTSQDKLDKIIQR 218

>pdb|3NEP|X Chain X, 1.55a Resolution Structure Of Malate Dehydrogenase From Salinibacter Ruber Length = 314

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142
           ++ ++  G PR  GM R D+++KN  I         +  +P+  ++VVANP +    +  
Sbjct: 71  DVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVE-GSPDSTIIVVANPLDVMTYVAY 129
Query: 143 EFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 201
           E A   P   +  +   LD  R    I+E+L+V V DV+  ++ G H  +  P   + TV
Sbjct: 130 E-ASGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQ-ALLMGGHGDTMVPLPRYTTV 187
Query: 202 NTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAII 236
               G  PV +L+ DDA +  E +   +  G  I+
Sbjct: 188 ----GGIPVPQLI-DDARIE-EIVERTKGAGGEIV 216

>pdb|1MLD|A Chain A, Refined Structure Of Mitochondrial Malate Dehydrogenase From Porcine Heart And The Consensus Structure For Dicarboxylic Acid Oxidoreductases Length = 314

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 37/243 (15%)
Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDI---PPAAEALNGVKMELVDA 61
           +V V GA+G IG  L        +L  + P++  L + DI   P  A  L+ ++      
Sbjct: 2   KVAVLGASGGIGQPLS-------LLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRAT-- 52
Query: 62  AFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA 121
               +KG +      +   G ++ V+  G PRK GM R D+ + N +I     +A  QH 
Sbjct: 53  ----VKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH- 107
Query: 122 APNCKVLVVANPANT----NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVS 177
            P+  + +++NP N+     A + K+     P K I  +T LD  RA   ++E   +  +
Sbjct: 108 CPDAMICIISNPVNSTIPITAEVFKKHGVYNPNK-IFGVTTLDIVRANAFVAELKGLDPA 166
Query: 178 DVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD-AWLNGEFITTVQQRGAAII 236
            V   +I G+   +  P ++  T        P  +  +D  + L G     +Q+ G  ++
Sbjct: 167 RVSVPVIGGHAGKTIIPLISQCT--------PKVDFPQDQLSTLTGR----IQEAGTEVV 214
Query: 237 KAR 239
           KA+
Sbjct: 215 KAK 217

>pdb|2DFD|A Chain A, Crystal Structure Of Human Malate Dehydrogenase Type 2 Length = 342

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 108/248 (43%), Gaps = 37/248 (14%)
Query: 2   AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDI---PPAAEALNGVKM 56
           A+   +V V GA+G IG  L        +L  + P++  L + DI   P  A  L+ ++ 
Sbjct: 25  AQNNAKVAVLGASGGIGQPLS-------LLLKNSPLVSRLTLYDIAHTPGVAADLSHIET 77
Query: 57  ELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 116
           +        +KG +      +   G ++ V+  G PRK GM R D+ + N +I     +A
Sbjct: 78  KAA------VKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAA 131
Query: 117 LEQHAAPNCKVLVVANPANT----NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKL 172
             QH  P   + V+ANP N+     A + K+     P K I  +T LD  RA   ++E  
Sbjct: 132 CAQH-CPEAMICVIANPVNSTIPITAEVFKKHGVYNPNK-IFGVTTLDIVRANTFVAELK 189
Query: 173 NVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD-AWLNGEFITTVQQR 231
            +  + V   +I G+   +  P ++  T        P  +  +D    L G     +Q+ 
Sbjct: 190 GLDPARVNVPVIGGHAGKTIIPLISQCT--------PKVDFPQDQLTALTGR----IQEA 237
Query: 232 GAAIIKAR 239
           G  ++KA+
Sbjct: 238 GTEVVKAK 245

>pdb|1HYG|A Chain A, Crystal Structure Of Mj0490 Gene Product, The Family Of LactateMALATE DEHYDROGENASE Length = 313

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 33/246 (13%)
Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKMELVDAAF 63
           ++V + GA+G++G A   ++A+       +P +  L ++    +   L G++ ++ DA  
Sbjct: 1   MKVTIIGASGRVGSATALLLAK-------EPFMKDLVLIGREHSINKLEGLREDIYDA-- 51
Query: 64  PLLKGV-------VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 116
             L G        V + + +      ++ ++  G PRKEGM R D+   N  I    A  
Sbjct: 52  --LAGTRSDANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKK 109
Query: 117 LEQHAAPNCKVLVVANPANT---NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173
           + +    + K+ V+ NP +     AL+  +F  +   +     T LD  R    I++   
Sbjct: 110 IAEIC--DTKIFVITNPVDVMTYKALVDSKFERN---QVFGLGTHLDSLRFKVAIAKFFG 164
Query: 174 VQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGA 233
           V + +V+  II G H  S  P ++     T+ G  P+++  +       E I  V+ +G 
Sbjct: 165 VHIDEVRTRII-GEHGDSMVPLLSA----TSIGGIPIQKFERFKELPIDEIIEDVKTKGE 219
Query: 234 AIIKAR 239
            II+ +
Sbjct: 220 QIIRLK 225

>pdb|1SMK|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures Length = 326

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKMEL--VDAA 62
           +V + GAAG IG  L        ML    P++  LH+ D+  A     GV  ++  +D  
Sbjct: 10  KVAILGAAGGIGQPLA-------MLMKMNPLVSVLHLYDVVNAP----GVTADISHMDTG 58
Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
             +++G +       A TG+++ ++  G PRK GM R D+   N  I K     + +   
Sbjct: 59  -AVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAK-CC 116
Query: 123 PNCKVLVVANPANTNALILKEF---APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDV 179
           P   V +++NP N+   I  E    A +   K +  +T LD  RA   ++E L +   DV
Sbjct: 117 PRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDV 176
Query: 180 KNVIIWGNHS 189
            +V + G H+
Sbjct: 177 -DVPVVGGHA 185

>pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures Length = 362

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKMEL--VDAA 62
           +V + GAAG IG  L        ML    P++  LH+ D+  A     GV  ++  +D  
Sbjct: 46  KVAILGAAGGIGQPLA-------MLMKMNPLVSVLHLYDVVNAP----GVTADISHMDTG 94
Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
             +++G +       A TG+++ ++  G PRK GM R D+   N  I K     + +   
Sbjct: 95  -AVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAK-CC 152
Query: 123 PNCKVLVVANPANTNALILKEF---APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDV 179
           P   V +++NP N+   I  E    A +   K +  +T LD  RA   ++E L +   DV
Sbjct: 153 PRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDV 212
Query: 180 KNVIIWGNHS 189
            +V + G H+
Sbjct: 213 -DVPVVGGHA 221

>pdb|1GV1|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142
           +I ++  G PRK GM R+D++ KN  I K     + +H+  N  ++VV+NP +    I+ 
Sbjct: 71  DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSK-NPIIIVVSNPLD----IMT 125
Query: 143 EFA---PSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNH 198
             A     +P + +  +   LD  R    I+ +L V + D+ N  + G H  +  P V +
Sbjct: 126 HVAWVRSGLPKERVIGMAGVLDAARFRSFIAMELGVSMQDI-NACVLGGHGDAMVPVVKY 184
Query: 199 ATV 201
            TV
Sbjct: 185 TTV 187

>pdb|1GUZ|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142
           +I ++  G PRK GM R+D++ KN  I K     + +H+  N  ++VV+NP +    I+ 
Sbjct: 71  DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSK-NPIIIVVSNPLD----IMT 125
Query: 143 EFA---PSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNH 198
             A     +P + +  +   LD  R    I+ +L V + D+ N  + G H  +  P V +
Sbjct: 126 HVAWVRSGLPKERVIGMAGVLDAARFRSFIAMELGVSMQDI-NACVLGGHGDAMVPVVKY 184
Query: 199 ATV 201
            TV
Sbjct: 185 TTV 187

>pdb|1GV0|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142
           +I V+  G PRK GM R+D++S N  I +     + +H + N  ++VV+NP +    I+ 
Sbjct: 71  DIVVITAGLPRKPGMTREDLLSMNAGIVREVTGRIMEH-SKNPIIVVVSNPLD----IMT 125
Query: 143 EFA---PSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNH 198
             A     +P + +  +   LD  R    I+ +L V + DV    + G H  +  P V +
Sbjct: 126 HVAWQKSGLPKERVIGMAGVLDSARFRSFIAMELGVSMQDV-TACVLGGHGDAMVPVVKY 184
Query: 199 ATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
            TV   AG  PV +L+   A    E +   +  GA I+   K
Sbjct: 185 TTV---AG-IPVADLIS--AERIAELVERTRTGGAEIVNHLK 220

>pdb|2HJR|A Chain A, Crystal Structure Of Cryptosporidium Parvum Malate Dehydrogenase Length = 328

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 29/236 (12%)
Query: 13  AAGQIGYALVPMIARGVMLGTDQPVILHMLDI---PPAAEALN-GVKMELVDAAFPLLKG 68
            AGQIG  +       ++LG      ++M DI    P  +AL+    M L+ +   +   
Sbjct: 21  GAGQIGSTI------ALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG- 73
Query: 69  VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL 128
                +  E     ++ ++  G PRK  M R D+++ N  I  + A  + ++  PN  V+
Sbjct: 74  ----ENNYEYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKY-CPNAFVI 128
Query: 129 VVANPANTNALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGN 187
            + NP +      KE    IPA  +  ++  LD  R    +S  L V+ SDV + I+ G 
Sbjct: 129 CITNPLDAMVYYFKE-KSGIPANKVCGMSGVLDSARFRCNLSRALGVKPSDV-SAIVVGG 186
Query: 188 HSSSQYPDVNHATV----------NTAAGEKPVRELVKDDAWLNGEFITTVQQRGA 233
           H     P  +  T+                  + E++K  A+  GE +  ++   A
Sbjct: 187 HGDEMIPLTSSVTIGGILLSDFVEQGKITHSQINEIIKKTAFGGGEIVELLKTGSA 242

>pdb|2PWZ|A Chain A, Crystal Structure Of The Apo Form Of E.Coli Malate Dehydrogenase Length = 312

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 25/206 (12%)
Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
           ++V V GAAG IG AL  ++   +  G++    L + DI P    +  V +  +  A  +
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSE----LSLYDIAPVTPGV-AVDLSHIPTAVKI 55
Query: 66  LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC 125
            KG  +  DA  A  G ++ ++  G  RK GM+R D+ + N  I K     L Q  A  C
Sbjct: 56  -KGF-SGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVK----NLVQQVAKTC 109
Query: 126 K---VLVVANPANTNALILKEF--APSIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDV 179
               + ++ NP NT   I  E      +  KN +  +T LD  R+   ++E    Q  +V
Sbjct: 110 PKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEV 169
Query: 180 KNVIIWGNHSS-------SQYPDVNH 198
           + V + G HS        SQ P V+ 
Sbjct: 170 E-VPVIGGHSGVTILPLLSQVPGVSF 194

>pdb|3P7M|A Chain A, Structure Of Putative Lactate Dehydrogenase From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 321

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142
           ++ ++  G PRK G  R D++  N+ + +     + +H  PN  V+ + NP +     L+
Sbjct: 75  DVVIVTAGVPRKPGXSRDDLLGINIKVXQTVGEGI-KHNCPNAFVICITNPLDIXVNXLQ 133
Query: 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 202
           +F+     K +     LD  R    ++++LNV V  V+   + G H  +  P    + V 
Sbjct: 134 KFSGVPDNKIVGXAGVLDSARFRTFLADELNVSVQQVQ-AYVXGGHGDTXVPLTKXSNVA 192
Query: 203 TAAGEKPVRE 212
             + E+ V+E
Sbjct: 193 GVSLEQLVKE 202

>pdb|1EMD|A Chain A, Crystal Structure Of A Ternary Complex Of Escherichia Coli Malate Dehydrogenase, Citrate And Nad At 1.9 Angstroms Resolution Length = 312

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 25/206 (12%)
Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
           ++V V GAAG IG AL  ++   +  G++    L + DI P    +  V +  +  A  +
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSE----LSLYDIAPVTPGV-AVDLSHIPTAVKI 55
Query: 66  LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC 125
            KG  +  DA  A  G ++ ++  G  RK GM+R D+ + N  I K     L Q  A  C
Sbjct: 56  -KGF-SGEDATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVK----NLVQQVAKTC 109
Query: 126 K---VLVVANPANTNALILKEF--APSIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDV 179
               + ++ NP NT   I  E      +  KN +  +T LD  R+   ++E    Q  +V
Sbjct: 110 PKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEV 169
Query: 180 KNVIIWGNHSS-------SQYPDVNH 198
           + V + G HS        SQ P V+ 
Sbjct: 170 E-VPVIGGHSGVTILPLLSQVPGVSF 194

>pdb|4E0B|A Chain A, 2.17 Angstrom Resolution Crystal Structure Of Malate Dehydrogenase From Vibrio Vulnificus Cmcp6 Length = 313

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 17/194 (8%)
Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL- 65
           +V V GAAG IG AL  ++   +  G+D    L + DI P      GV  +L  +  P  
Sbjct: 5   KVAVIGAAGGIGQALALLLKNRLPAGSD----LALYDIAPVTP---GVAADL--SHIPTH 55
Query: 66  --LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
             +KG  A  D   A  G ++ ++  G  RK G +R D+ + N  I K+ A  +     P
Sbjct: 56  VSIKG-YAGEDPTPALEGADVVLISAGVARKPGXDRADLFNVNAGIVKSLAERIAV-VCP 113
Query: 124 NCKVLVVANPANTNALILKEF---APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           N  + ++ NP NT   I  E    A     + +  +T LD  R+   ++E       +V+
Sbjct: 114 NACIGIITNPVNTTVPIAAEVLKKAGVYDKRKLFGVTTLDVIRSETFVAELKGQDPGEVR 173
Query: 181 NVIIWGNHSSSQYP 194
             +I G+   +  P
Sbjct: 174 VPVIGGHSGVTILP 187

>pdb|1EZ4|A Chain A, Crystal Structure Of Non-Allosteric L-Lactate Dehydrogenase From Lactobacillus Pentosus At 2.3 Angstrom Resolution Length = 318

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 79  CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA 138
           C   ++ V+  G P+K G  R D+++KN++I  +    +          LV ANP +   
Sbjct: 70  CKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGI-FLVAANPVDILT 128
Query: 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNH 198
               +F+     + I   T LD +R    + ++ NV    V +  I G H  S++   + 
Sbjct: 129 YATWKFSGFPKERVIGSGTSLDSSRLRVALGKQFNVDPRSV-DAYIMGEHGDSEFAAYST 187
Query: 199 ATVNTAAGEKPVRELVKD 216
           AT+ T    +PVR++ K+
Sbjct: 188 ATIGT----RPVRDVAKE 201

>pdb|1IB6|A Chain A, Crystal Structure Of R153c E. Coli Malate Dehydrogenase Length = 312

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
           ++V V GAAG IG AL  ++   +  G++    L + DI P    +  V +  +  A  +
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSE----LSLYDIAPVTPGV-AVDLSHIPTAVKI 55
Query: 66  LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC 125
            KG  +  DA  A  G ++ ++  G  RK GM+R D+ + N  I K     L Q  A  C
Sbjct: 56  -KGF-SGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVK----NLVQQVAKTC 109
Query: 126 K---VLVVANPANTNALILKE 143
               + ++ NP NT   I  E
Sbjct: 110 PKACIGIITNPVNTTVAIAAE 130

>pdb|2V65|A Chain A, Apo Ldh From The Psychrophile C. Gunnari Length = 331

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 39  LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGME 98
           L M+D+    + L G  M+L   +  L   +V   D         + V+  G  ++EG  
Sbjct: 48  LAMVDV--MEDKLKGEVMDLQHGSLFLKTKIVGDKD-YSVTANSKVVVVTAGARQQEGES 104
Query: 99  RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR 158
           R +++ +NV+I+K     + ++ +PNC ++VV+NP +    +  + +     + I   T 
Sbjct: 105 RLNLVQRNVNIFKFIIPNIVKY-SPNCILMVVSNPVDILTYVAWKLSGFPRHRVIGSGTN 163
Query: 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP 194
           LD  R    I EKL++  S     I+ G H  S  P
Sbjct: 164 LDSARFRHLIGEKLHLHPSSCHAWIV-GEHGDSSVP 198

>pdb|1Y6J|A Chain A, L-Lactate Dehydrogenase From Clostridium Thermocellum Cth-1135 Length = 318

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142
           ++ V+  G  RK G  R D+  KNV I K     + ++      +LVV+NP +    +++
Sbjct: 76  DVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGV-ILVVSNPVDIITYMIQ 134
Query: 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP 194
           +++     K I   T LD  R    +SEKL V V +V   II G H  SQ P
Sbjct: 135 KWSGLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHGYII-GEHGDSQLP 185

>pdb|1V6A|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Cyprinus Carpio Length = 332

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Query: 49  EALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVS 108
           + L G  M+L   +  L    +             + V+  G  ++EG  R +++ +NV+
Sbjct: 56  DKLKGEAMDLQHGSLFLKTHKIVADKDYSVTANSKVVVVTAGARQQEGESRLNLVQRNVN 115
Query: 109 IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQI 168
           I+K     + ++ +PNC +LVV+NP +    +  + +     + I   T LD  R    +
Sbjct: 116 IFKFIIPNIIKY-SPNCILLVVSNPVDILTYVAWKLSGLPRNRVIGSGTNLDSARFRHLM 174
Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYP 194
            EKL +  S+    +I G H  S  P
Sbjct: 175 GEKLGIHPSNCHGWVI-GEHGDSSVP 199

>pdb|2J5K|A Chain A, 2.0 A Resolution Structure Of The Wild Type Malate Dehydrogenase From Haloarcula Marismortui (radiation Damage Series) Length = 304

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 77  EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136
           E   G ++ V+  G PR+ G  R D+   N  I +   S+L++H   +   L  +NP + 
Sbjct: 67  EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPVDL 125
Query: 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP 194
               L E       + I    RLD  R    +SE+ +  V +V+  I+ G H  +Q P
Sbjct: 126 LNRHLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTIL-GEHGDAQVP 182

>pdb|1O6Z|A Chain A, 1.95 A Resolution Structure Of (r207s,r292s) Mutant Of Malate Dehydrogenase From The Halophilic Archaeon Haloarcula Marismortui (holo Form) Length = 303

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 77  EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136
           E   G ++ V+  G PR+ G  R D+   N  I +   S+L++H   +   L  +NP + 
Sbjct: 66  EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPVDL 124
Query: 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDV 196
               L E       + I    RLD  R    +SE+ +  V +V+  I+ G H  +Q P  
Sbjct: 125 LNRHLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTIL-GEHGDAQVPVF 183
Query: 197 NHATVN 202
           +  +V+
Sbjct: 184 SKVSVD 189

>pdb|1HLP|A Chain A, Structural Features Stabilizing Halophilic Malate Dehydrogenase From An Archaebacterium Length = 303

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 77  EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136
           E   G ++ V+  G PR+ G  R D+   N  I +   S+L++H   +   L  +NP + 
Sbjct: 66  EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPVDL 124
Query: 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP 194
               L E       + I    RLD  R    +SE+ +  V +V+  I+ G H  +Q P
Sbjct: 125 LNRHLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTIL-GEHGDAQVP 181

>pdb|2X0R|A Chain A, R207s,R292s Mutant Of Malate Dehydrogenase From The Halophilic Archaeon Haloarcula Marismortui (Holo Form) Length = 304

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 77  EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136
           E   G ++ V+  G PR+ G  R D+   N  I +   S+L++H   +   L  +NP + 
Sbjct: 67  EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPVDL 125
Query: 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDV 196
               L E       + I    RLD  R    +SE+ +  V +V+  I+ G H  +Q P  
Sbjct: 126 LNRHLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTIL-GEHGDAQVPVF 184
Query: 197 NHATVN 202
           +  +V+
Sbjct: 185 SKVSVD 190

>pdb|2HLP|A Chain A, Crystal Structure Of The E267r Mutant Of A Halophilic Malate Dehydrogenase In The Apo Form Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 77  EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136
           E   G ++ V+  G PR+ G  R D+   N  I +   S+L++H   +   L  +NP + 
Sbjct: 66  EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPVDL 124
Query: 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP 194
               L E       + I    RLD  R    +SE+ +  V +V+  I+ G H  +Q P
Sbjct: 125 LNRHLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTIL-GEHGDAQVP 181

>pdb|1UXH|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric Malate Dehydrogenase By Single Point Mutations At The Dimer-Dimer Interface Length = 309

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKA---QASALEQHAAPNCKVLVVANPANTNAL 139
           ++ V+  G PRK GM R+D++  N  I +A   QA+ L    +PN  +++V NP +    
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL----SPNAVIIMVNNPLDAMTY 127
Query: 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHA 199
           +  E +     + I     LD  R    I+ +  V V DV+  ++ G H     P    +
Sbjct: 128 LAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVQDVQ-AMLMGGHGDEMVPLPRFS 186
Query: 200 TVNTAAGEKPVRELVKDD 217
           T++      PV E +  D
Sbjct: 187 TISGI----PVSEFIAPD 200

>pdb|1GUY|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 309

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKA---QASALEQHAAPNCKVLVVANPANTNAL 139
           ++ V+  G PRK GM R+D++  N  I +A   QA+ L    +PN  +++V NP +    
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL----SPNAVIIMVNNPLDAMTY 127
Query: 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHA 199
           +  E +     + I     LD  R    I+ +  V V DV+  ++ G H     P    +
Sbjct: 128 LAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQ-AMLMGGHGDEMVPLPRFS 186
Query: 200 TVNTAAGEKPVRELVKDD 217
           T++      PV E +  D
Sbjct: 187 TISGI----PVSEFIAPD 200

>pdb|1UXI|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric Malate Dehydrogenase By Single Point Mutations At The Dimer-Dimer Interface Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKA---QASALEQHAAPNCKVLVVANPANTNAL 139
           ++ V+  G PRK GM R+D++  N  I +A   QA+ L    +PN  +++V NP +    
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL----SPNAVIIMVNNPLDAMTY 127
Query: 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHA 199
           +  E +     + I     LD  R    I+ +  V V DV+  ++ G H     P    +
Sbjct: 128 LAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVKDVQ-AMLMGGHGDEMVPLPRFS 186
Query: 200 TVNTAAGEKPVRELVKDD 217
           T++      PV E +  D
Sbjct: 187 TISGI----PVSEFIAPD 200

>pdb|2X0I|A Chain A, 2.9 A Resolution Structure Of Malate Dehydrogenase From Archaeoglobus Fulgidus In Complex With Nadh Length = 294

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 81  GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140
           G  I V+  G  RK GM R D+  KN  I K  A  + ++A P  K+LVV NP +    I
Sbjct: 69  GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMDVMTYI 127
Query: 141 L-KEFAPSIPAKNITCL-TRLDHNRALGQISEKL-NVQVSDVKNVIIWGNHSSSQY 193
           + KE     P   +  +  +LD  R    + E+L N    +++   I G H  S +
Sbjct: 128 MWKESGK--PRNEVFGMGNQLDSQR----LKERLYNAGARNIRRAWIIGEHGDSMF 177

>pdb|3PQD|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus Subtilis Complexed With Fbp And Nad+ Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 10/239 (4%)
Query: 77  EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136
           E C   +I  +  G  +K G  R +++ KN+ I+K   S +   +  +   LV  NP + 
Sbjct: 69  EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEV-MASGFDGIFLVATNPVDI 127
Query: 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDV 196
                 +F+     + I   T LD  R    +SE       +V   II G H  ++ P  
Sbjct: 128 LTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVHAHII-GEHGDTELPVW 186
Query: 197 NHATVNTAAGEKPVRELV-KDDAWLNGEFITTVQQ-RGAAIIKARKXXXXXXXXXXXCDH 254
           +HA V    G  PV ELV K+DA+   E    V   + AA     K              
Sbjct: 187 SHANV----GGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIEKKGATYYGVAMSLAR 242
Query: 255 IRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKL 313
           I   +L   E + +++  Y DG Y      I   P     G    +  L+++E  +++ 
Sbjct: 243 ITKAILHN-ENSILTVSTYLDGQYGADDVYI-GVPAVVNRGGIAGITELNLNEKEKEQF 299

>pdb|1LLC|A Chain A, Structure Determination Of The Allosteric L-Lactate Dehydrogenase From Lactobacillus Casei At 3.0 Angstroms Resolution Length = 325

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 9/221 (4%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142
           ++ V+  G P++ G  R D+++KN+ I K+    +   +  N   LV ANP +       
Sbjct: 77  DLVVITAGAPKQPGETRLDLVNKNLKILKSIVDPIVD-SGFNLIFLVAANPVDILTYATW 135
Query: 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 202
           + +     + +   T LD  R    I+E +NV    V +  I G H  +++P  +HA + 
Sbjct: 136 KLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSV-HAYIMGEHGDTEFPVWSHANIG 194
Query: 203 --TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVL 260
             T A        +K+D  +  +    V+     IIK +               I   +L
Sbjct: 195 GVTIAEWVKAHPEIKEDKLV--KMFEDVRDAAYEIIKLKGATFYGIATALA--RISKAIL 250
Query: 261 GTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQ 301
              E   + + VY DG Y +    I +  V  RNG   I++
Sbjct: 251 -NDENAVLPLSVYMDGQYGINDLYIGTPAVINRNGIQNILE 290

>pdb|6LDH|A Chain A, Refined Crystal Structure Of Dogfish M4 Apo-Lactate Dehydrogenase Length = 330

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 49  EALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVS 108
           + L G  M+L   +  L    + +        G  + V+  G  ++EG  R +++ +NV+
Sbjct: 57  DKLKGEMMDLQHGSLFLHTAKIVSGKDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVN 116
Query: 109 IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQI 168
           I+K     + +H +P+C +LVV+NP +    +  + +     + I     LD  R    +
Sbjct: 117 IFKFIIPNIVKH-SPDCIILVVSNPVDVLTYVAWKLSGLPMHRIIGSGCNLDSARFRYLM 175
Query: 169 SEKLNVQVSDVKNVIIWGNHSSS 191
            E+L V        +I G H  S
Sbjct: 176 GERLGVHSCSCHGWVI-GEHGDS 197

>pdb|1LDM|A Chain A, Refined Crystal Structure Of Dogfish M4 Apo-Lactate Dehydrogenase Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 49  EALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVS 108
           + L G  M+L   +  L    + +        G  + V+  G  ++EG  R +++ +NV+
Sbjct: 56  DKLKGEMMDLQHGSLFLHTAKIVSGKDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVN 115
Query: 109 IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQI 168
           I+K     + +H +P+C +LVV+NP +    +  + +     + I     LD  R    +
Sbjct: 116 IFKFIIPNIVKH-SPDCIILVVSNPVDVLTYVAWKLSGLPMHRIIGSGCNLDSARFRYLM 174
Query: 169 SEKLNVQVSDVKNVIIWGNHSSS 191
            E+L V        +I G H  S
Sbjct: 175 GERLGVHSCSCHGWVI-GEHGDS 196

>pdb|5LDH|A Chain A, Structure Of The Active Ternary Complex Of Pig Heart Lactate Dehydrogenase With S-Lac-Nad At 2.7 Angstroms Resolution Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 7   RVLVTGAAGQIGYAL-VPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
           ++ V G  GQ+G A  + ++ + +   TD+  ++ +L+     + L G  M+L   +  L
Sbjct: 23  KITVVGV-GQVGMACAISILGKSL---TDELALVDVLE-----DKLKGEMMDLQHGSLFL 73
Query: 66  LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC 125
               +             I V+  G  ++EG  R +++ +NV+++K     + ++ +PNC
Sbjct: 74  QTPKIVANKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPNC 132
Query: 126 KVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIW 185
            ++VV+NP +    +  + +     + I     LD  R    + EKL V  S     I+ 
Sbjct: 133 IIIVVSNPVDILTYVAWKLSGLPKHRVIGSGCNLDSARFRYLMGEKLGVHPSSCHGWIL- 191
Query: 186 GNHSSS 191
           G H  S
Sbjct: 192 GEHGDS 197

>pdb|2LDX|A Chain A, Characterization Of The Antigenic Sites On The Refined 3- Angstroms Resolution Structure Of Mouse Testicular Lactate Dehydrogenase C4 Length = 331

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 84  IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE 143
           + ++  G     G  R D++ +NV+I KA    + Q++ P+CK++VV NP +    ++ +
Sbjct: 90  LVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNS-PDCKIIVVTNPVDILTYVVWK 148
Query: 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP 194
            +     + I     LD  R    I EKL V  +     ++ G H  S  P
Sbjct: 149 ISGFPVGRVIGSGCNLDSARFRYLIGEKLGVNPTSCHGWVL-GEHGDSSVP 198

>pdb|2ZQY|A Chain A, T-State Structure Of Allosteric L-Lactate Dehydrogenase From Lactobacillus Casei Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 9/221 (4%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142
           ++ V+  G P+K G  R D+++KN+ I K+    +   +  N   LV ANP +       
Sbjct: 78  DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAANPVDILTYATW 136
Query: 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 202
           + +     + +   T LD  R    I+E +NV    V +  I G H  +++P  +HA + 
Sbjct: 137 KLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSV-HAYIMGEHGDTEFPVWSHANIG 195
Query: 203 --TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVL 260
             T A        +K+D  +  +    V+     IIK +               I   +L
Sbjct: 196 GVTIAEWVKAHPEIKEDKLV--KMFEDVRDAAYEIIKLKGATFYGIATALA--RISKAIL 251
Query: 261 GTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQ 301
              E   + + VY DG Y +    I +  V  RNG   I++
Sbjct: 252 -NDENAVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILE 291

>pdb|9LDT|A Chain A, Design And Synthesis Of New Enzymes Based On The Lactate Dehydrogenase Framework Length = 332

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Query: 49  EALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVS 108
           + L G  M+L   +  L    + +           + V+  G  ++EG  R +++ +NV+
Sbjct: 56  DKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVN 115
Query: 109 IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQI 168
           I+K     + ++ +PNCK+LVV+NP +    +  + +     + I     LD  R    +
Sbjct: 116 IFKFIIPNIVKY-SPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLM 174
Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYP 194
            E+L V        I+ G H  S  P
Sbjct: 175 GERLGVHPLSCHGWIL-GEHGDSSVP 199

>pdb|3PQE|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus Subtilis With H171c Mutation Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 10/239 (4%)
Query: 77  EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136
           E C   +I  +  G  +K G  R +++ KN+ I+K   S +   +  +   LV  NP + 
Sbjct: 69  EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEV-MASGFDGIFLVATNPVDI 127
Query: 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDV 196
                 +F+     + I   T LD  R    +SE       +V   II G H  ++ P  
Sbjct: 128 LTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAHII-GEHGDTELPVW 186
Query: 197 NHATVNTAAGEKPVRELV-KDDAWLNGEFITTVQQ-RGAAIIKARKXXXXXXXXXXXCDH 254
           +HA V    G  PV ELV K+DA+   E    V   + AA     K              
Sbjct: 187 SHANV----GGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIEKKGATYYGVAMSLAR 242
Query: 255 IRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKL 313
           I   +L   E + +++  Y DG Y      I   P     G    +  L+++E  +++ 
Sbjct: 243 ITKAILHN-ENSILTVSTYLDGQYGADDVYI-GVPAVVNRGGIAGITELNLNEKEKEQF 299

>pdb|3VKU|A Chain A, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 9/221 (4%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142
           ++ V+  G P+K G  R D+++KN+ I K+    +   +  N   LV ANP +       
Sbjct: 78  DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAANPVDILTYATW 136
Query: 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 202
           + +     + +   T LD  R    I++ +NV    V +  I G H  +++P  +HA + 
Sbjct: 137 KLSGFPKNRVVGSGTSLDTARFRQSIAKMVNVDARSV-HAYIMGEHGDTEFPVWSHANIG 195
Query: 203 --TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVL 260
             T A        +K+D  +  +    V+ +   IIK +               I   +L
Sbjct: 196 GVTIAEWVKAHPEIKEDKLV--KMFEDVRNKAYEIIKLKGATFYGIATALA--RISKAIL 251
Query: 261 GTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQ 301
              E   + + VY DG Y +    I +  V  RNG   I++
Sbjct: 252 -NDENAVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILE 291

>pdb|1UR5|A Chain A, Stabilization Of A Tetrameric Malate Dehydrogenase By Introduction Of A Disulfide Bridge At The DimerDIMER Interface Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 83  NIAVMVGGFPRKEGMERKDVMSKNVSIYKA---QASALEQHAAPNCKVLVVANPANTNAL 139
           ++ V+  G PRK GM R+D++  N  I +A   QA+ L    +PN  +++V NP +    
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL----SPNAVIIMVNNPLDAMTY 127
Query: 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHA 199
           +  E +     + I     LD  R    I+ +  V V DV+  ++ G H     P    +
Sbjct: 128 LAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQ-AMLMGGHGDEMVPLPRFS 186
Query: 200 TVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
            ++      PV E +  D     + +   ++ G  I+   K
Sbjct: 187 CISGI----PVSEFIAPDRL--AQIVERTRKGGGEIVNLLK 221

>pdb|3H3F|A Chain A, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh And Oxamate Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Query: 49  EALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVS 108
           + L G  M+L   +  L    + +           + ++  G  ++EG  R +++ +NV+
Sbjct: 55  DKLKGEMMDLQHGSLFLRTPKIVSGKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVN 114
Query: 109 IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQI 168
           I+K     + ++ +P+CK+LVV+NP +    +  + +     + I     LD  R    +
Sbjct: 115 IFKFIIPNVVKY-SPHCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLM 173
Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYP 194
            E+L V        I+ G H  S  P
Sbjct: 174 GERLGVHALSCHGWIL-GEHGDSSVP 198

>pdb|1I10|A Chain A, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary Complex With Nadh And Oxamate Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Query: 49  EALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVS 108
           + L G  M+L   +  L    + +           + ++  G  ++EG  R +++ +NV+
Sbjct: 55  DKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVN 114
Query: 109 IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQI 168
           I+K     + ++ +PNCK+L+V+NP +    +  + +     + I     LD  R    +
Sbjct: 115 IFKFIIPNVVKY-SPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLM 173
Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYP 194
            E+L V        ++ G H  S  P
Sbjct: 174 GERLGVHPLSCHGWVL-GEHGDSSVP 198

>pdb|4AJP|A Chain A, Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3- Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl) Phenyl)methyl)propanedioic Acid Length = 337

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Query: 49  EALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVS 108
           + L G  M+L   +  L    + +           + ++  G  ++EG  R +++ +NV+
Sbjct: 55  DKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVN 114
Query: 109 IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQI 168
           I+K     + ++ +PNCK+L+V+NP +    +  + +     + I     LD  R    +
Sbjct: 115 IFKFIIPNVVKY-SPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLM 173
Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYP 194
            E+L V        ++ G H  S  P
Sbjct: 174 GERLGVHPLSCHGWVL-GEHGDSSVP 198

>pdb|1I0Z|A Chain A, Human Heart L-Lactate Dehydrogenase H Chain, Ternary Complex With Nadh And Oxamate Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 10/185 (5%)
Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           ++ V G  GQ+G A    I     LG      L ++D+    + L G  M+L   +  L 
Sbjct: 22  KITVVGV-GQVGMACAISI-----LGKSLADELALVDV--LEDKLKGEMMDLQHGSLFLQ 73
Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
              +             I V+  G  ++EG  R +++ +NV+++K     + ++ +P+C 
Sbjct: 74  TPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPDCI 132
Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186
           ++VV+NP +    +  + +     + I     LD  R    ++EKL +  S     I+ G
Sbjct: 133 IIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHGWIL-G 191
Query: 187 NHSSS 191
            H  S
Sbjct: 192 EHGDS 196

>pdb|1T2F|A Chain A, Human B Lactate Dehydrogenase Complexed With Nad+ And 4- Hydroxy-1,2,5-Oxadiazole-3-Carboxylic Acid Length = 333

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 10/185 (5%)
Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           ++ V G  GQ+G A    I     LG      L ++D+    + L G  M+L   +  L 
Sbjct: 22  KITVVGV-GQVGMACAISI-----LGKSLADELALVDV--LEDKLKGEMMDLQHGSLFLQ 73
Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
              +             I V+  G  ++EG  R +++ +NV+++K     + ++ +P+C 
Sbjct: 74  TPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPDCI 132
Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186
           ++VV+NP +    +  + +     + I     LD  R    ++EKL +  S     I+ G
Sbjct: 133 IIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHGWIL-G 191
Query: 187 NHSSS 191
            H  S
Sbjct: 192 EHGDS 196

>pdb|2A92|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Plasmodium Vivax: Complex With Nadh Length = 321

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 70  VATTDAVEACTGVNIAVMVGGFPRKEGME-----RKDVMSKNVSIYKAQASALEQHAAPN 124
           V  +++ +   G ++ ++  GF +  G       R D++  N  I       + ++  PN
Sbjct: 60  VTGSNSYDDLKGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHI-KNLCPN 118
Query: 125 CKVLVVANPANTNALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVI 183
             ++VV NP +    +L E +  +P   I  L   LD +R    IS+KLNV   DV N +
Sbjct: 119 AFIIVVTNPVDVMVQLLFEHS-GVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDV-NAL 176
Query: 184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQ 229
           I G H +       + TV    G  P++E + +    D  + G F  TV 
Sbjct: 177 IVGAHGNKMVLLKRYITV----GGIPLQEFINNKKITDEEVEGIFDRTVN 222

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	332
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	1e-177
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	1e-177
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	1e-172
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	1e-170
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	1e-107
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	4e-19
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	5e-19
3tl2_A	315	Malate dehydrogenase; center for structural genomi	7e-19
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	2e-18
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	2e-18
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	3e-18
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	5e-18
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	5e-18
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	6e-18
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	1e-17
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	1e-17
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	2e-17
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	3e-17
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	4e-17
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	6e-17
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	9e-16
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	2e-15
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	4e-15
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	1e-14
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	2e-14
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	3e-14
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	7e-14
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	2e-13
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	2e-13
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	2e-13
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	5e-13
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	7e-13
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	1e-12
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	3e-12
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	6e-12
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	2e-09
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	2e-06
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	9e-05
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	2e-04
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	2e-04
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	4e-04

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A Length = 329

 Score =  493 bits (1270), Expect = e-177
 Identities = 174/333 (52%), Positives = 227/333 (68%), Gaps = 7/333 (2%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMEL 58
           MAK P+RV VTGAAGQI Y+L+  IA G MLG DQPVIL +L+IP   A +AL GV ME+
Sbjct: 1   MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEI 60

Query: 59  VDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALE 118
            D AFPLL G+ A  D + A    ++A++VG  PR  GMERKD++  N  I+  Q  A++
Sbjct: 61  DDCAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAID 120

Query: 119 QHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSD 178
             A+ N KVLVV NPANTNA I  + APS+PAKN T + RLDHNRAL QI+ K    VS 
Sbjct: 121 AVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSS 180

Query: 179 VKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA 238
           ++ + +WGNHS + Y D  +A ++       V++++ DDAW    F+ TV +RGAAII A
Sbjct: 181 IEKLFVWGNHSPTMYADYRYAQID----GASVKDMINDDAWNRDTFLPTVGKRGAAIIDA 236

Query: 239 RKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWT 298
           R +SSA SAA++A DHI DWVLGT  G W +MG+ SDGSY +P G+I+ FPVT  NGE+ 
Sbjct: 237 RGVSSAASAANAAIDHIHDWVLGTA-GKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYK 295

Query: 299 IVQGLSIDEFSRKKLDLTAEELSEEKALAYSCL 331
           IVQGLSID FS++++++T  EL EE+      L
Sbjct: 296 IVQGLSIDAFSQERINVTLNELLEEQNGVQHLL 328

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* Length = 327

 Score =  491 bits (1267), Expect = e-177
 Identities = 174/323 (53%), Positives = 225/323 (69%), Gaps = 5/323 (1%)

Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           K PVRV VTGAAGQIGY+L+  IA G MLG DQPVIL +L+IP A +AL GV MEL D A
Sbjct: 2   KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA 61

Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           FPLL G+ AT D   A    + A++VG  PRK GMER+D++  N  I+  Q  AL + A 
Sbjct: 62  FPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAK 121

Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182
            + KVLVV NPANTNALI  + AP +  +N T +TRLDHNRA  Q+++K    V  ++ +
Sbjct: 122 KDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRM 181

Query: 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242
            +WGNHSS+ +PD+ HA V+     +P  ELV D  W    FI TV QRGAAII+AR  S
Sbjct: 182 TVWGNHSSTMFPDLFHAEVDG----RPALELV-DMEWYEKVFIPTVAQRGAAIIQARGAS 236

Query: 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQG 302
           SA SAA++A +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+G
Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEG 296

Query: 303 LSIDEFSRKKLDLTAEELSEEKA 325
           L I+EF+RK++++TA+EL +E  
Sbjct: 297 LEINEFARKRMEITAQELLDEME 319

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* Length = 333

 Score =  481 bits (1240), Expect = e-172
 Identities = 201/330 (60%), Positives = 248/330 (75%), Gaps = 1/330 (0%)

Query: 4   EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
           EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct: 2   EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 61

Query: 64  PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
           PLLK V+AT     A   +++A++VG  PR++GMERKD++  NV I+K Q +AL+++A  
Sbjct: 62  PLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKK 121

Query: 124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183
           + KV+VV NPANTN L   + APSIP +N +CLTRLDHNRA  QI+ KL V   DVKNVI
Sbjct: 122 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVI 181

Query: 184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS 243
           IWGNHSS+QYPDVNHA V   A E  V E VKDD+WL GEFITTVQQRGAA+IKARKLSS
Sbjct: 182 IWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARKLSS 241

Query: 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQG 302
           A+SAA + CDH+RD   GTPEG +VSMG+ SDG SY VP  L+YSFPVT ++  W IV+G
Sbjct: 242 AMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEG 301

Query: 303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
           L I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct: 302 LPINDFSREKMDLTAKELAEEKETAFEFLS 331

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* Length = 375

 Score =  476 bits (1228), Expect = e-170
 Identities = 136/333 (40%), Positives = 189/333 (56%), Gaps = 6/333 (1%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
             K+ V + V+GAAG I   L+  +A G + G DQP+ L +L    + +AL GV MEL D
Sbjct: 28  SWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELED 87

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           + +PLL+ V    D  E    V+ A+++G  PR  GMER  ++  N  I+  Q  AL   
Sbjct: 88  SLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 147

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
           A+ N KVLVV NP NTNALI  + AP IPAKN   LTRLD NRA  Q++ K  V    V 
Sbjct: 148 ASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKVS 207

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
           NV IWGNHS++Q PD  +A ++     +PV+E++K   WL  EF  TVQ+RG A+I+   
Sbjct: 208 NVTIWGNHSTTQVPDFLNAKID----GRPVKEVIKRTKWLEEEFTITVQKRGGALIQKWG 263

Query: 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWT 298
            SSA S A S  D I+  V  TPEG W S GVY+ G+ Y +   +++S P     +G++ 
Sbjct: 264 RSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYE 323

Query: 299 IVQGLSIDEFSRKKLDLTAEELSEEKALAYSCL 331
           +   +S D+F  +++  +  EL  EK       
Sbjct: 324 LATDVSNDDFLWERIKKSEAELLAEKKCVAHLT 356

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} Length = 343

 Score =  315 bits (809), Expect = e-107
 Identities = 79/324 (24%), Positives = 130/324 (40%), Gaps = 19/324 (5%)

Query: 5   PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP 64
             ++ + GAAG IG  +    A    L  +  + L      P A  L GV  E+    F 
Sbjct: 8   EEKLTIVGAAGMIGSNMAQTAAMM-RLTPN--LCL----YDPFAVGLEGVAEEIRHCGFE 60

Query: 65  LLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN 124
            L  +  T+D  EA T     V  GG PRKEGM R+D++  N  I       ++ +    
Sbjct: 61  GL-NLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDC 119

Query: 125 CKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVII 184
             V+++ NPA+   L+   ++  +    +T L  LD  R   ++++   ++ S V N   
Sbjct: 120 KHVIIIFNPADITGLVTLIYSG-LKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRT 178

Query: 185 WGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLN---GEFITTVQQRGAAIIKARKL 241
           +G H        + A VN   G  P+ +L+  D   N    E    V + GA IIK R  
Sbjct: 179 YGGHGEQMAVFASTAKVN---G-TPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLRGR 234

Query: 242 SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQ 301
           SS  S +  + + IR  + G     W +   Y +        ++       ++G      
Sbjct: 235 SSFQSPSYVSIEMIRAAMGGEA-FRWPAG-CYVNV-PGFEHIMMAMETTITKDGVKHSDI 291

Query: 302 GLSIDEFSRKKLDLTAEELSEEKA 325
               +E  R  L  +   L++ + 
Sbjct: 292 NQLGNEAERAALKESYSHLAKLRD 315

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* Length = 314

 Score = 85.4 bits (212), Expect = 4e-19
 Identities = 74/334 (22%), Positives = 126/334 (37%), Gaps = 56/334 (16%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKMELVDAAFP 64
           +V V GA+G IG  L  ++          P++  L + DI        GV  +L      
Sbjct: 2   KVAVLGASGGIGQPLSLLLKN-------SPLVSRLTLYDIAHT----PGVAADLSHIETR 50

Query: 65  L-LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
             +KG +      +   G ++ V+  G PRK GM R D+ + N +I     +A  QH  P
Sbjct: 51  ATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CP 109

Query: 124 NCKVLVVANPANT----NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDV 179
           +  + +++NP N+     A + K+         I  +T LD  RA   ++E   +  + V
Sbjct: 110 DAMICIISNPVNSTIPITAEVFKKHG-VYNPNKIFGVTTLDIVRANAFVAELKGLDPARV 168

Query: 180 KNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA 238
            +V + G H+  +  P ++  T      +  +  L              +Q+ G  ++KA
Sbjct: 169 -SVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTG-----------RIQEAGTEVVKA 216

Query: 239 RK------LSSALSAASSA---CDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFP 289
           +       LS A + A       D +     G  E ++V                 Y F 
Sbjct: 217 KAGAGSATLSMAYAGARFVFSLVDAMNG-KEGVVECSFVKSQET---------DCPY-FS 265

Query: 290 VTCRNGEWTIVQGLSIDEFS---RKKLDLTAEEL 320
                G+  I + L I + S    K +     EL
Sbjct: 266 TPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPEL 299

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* Length = 312

 Score = 84.9 bits (211), Expect = 5e-19
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 14/188 (7%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
           ++V V GAAG IG AL  ++   +  G++    L + DI P      GV ++L      +
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSE----LSLYDIAPVTP---GVAVDLSHIPTAV 53

Query: 66  LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC 125
                +  DA  A  G ++ ++  G  RK GM+R D+ + N  I K     + +   P  
Sbjct: 54  KIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKA 112

Query: 126 KVLVVANPANT----NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181
            + ++ NP NT     A +LK+ A       +  +T LD  R+   ++E    Q  +V  
Sbjct: 113 CIGIITNPVNTTVAIAAEVLKK-AGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEV-E 170

Query: 182 VIIWGNHS 189
           V + G HS
Sbjct: 171 VPVIGGHS 178

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Length = 315

 Score = 84.5 bits (210), Expect = 7e-19
 Identities = 50/257 (19%), Positives = 96/257 (37%), Gaps = 40/257 (15%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           M  +  +V V GA G  G     ++A          V++   DIP       G  +++++
Sbjct: 4   MTIKRKKVSVIGA-GFTGATTAFLLA---QKELADVVLV---DIPQLENPTKGKALDMLE 56

Query: 61  AA-FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQ 119
           A+        +  T         ++ V+  G  RK GM R D+++ N  I K+    + +
Sbjct: 57  ASPVQGFDANIIGTSDYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAK 116

Query: 120 HAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ 167
           H +PN  ++V+ NP +     + +                   R +GQ            
Sbjct: 117 H-SPNAIIVVLTNPVDAMTYSVFKE------------AGFPKERVIGQSGVLDTARFRTF 163

Query: 168 ISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITT 227
           I+++LN+ V D+   ++ G H     P V ++         P+  L+  +       +  
Sbjct: 164 IAQELNLSVKDITGFVL-GGHGDDMVPLVRYSYAGG----IPLETLIPKERLE--AIVER 216

Query: 228 VQQRGAAIIKARKLSSA 244
            ++ G  I+      SA
Sbjct: 217 TRKGGGEIVGLLGNGSA 233

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* Length = 313

 Score = 83.7 bits (208), Expect = 2e-18
 Identities = 62/338 (18%), Positives = 131/338 (38%), Gaps = 54/338 (15%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--- 62
           ++V + GA+G++G A   ++A        + ++L  +    +   L G++ ++ DA    
Sbjct: 1   MKVTIIGASGRVGSATALLLA---KEPFMKDLVL--IGREHSINKLEGLREDIYDALAGT 55

Query: 63  -FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA 121
                   V + + +      ++ ++  G PRKEGM R D+   N  I    A  + +  
Sbjct: 56  RSDA-NIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI- 113

Query: 122 APNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------IS 169
               K+ V+ NP +                     ++ + N+  G             I+
Sbjct: 114 CDT-KIFVITNPVDVMTYKALVD------------SKFERNQVFGLGTHLDSLRFKVAIA 160

Query: 170 EKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQ 229
           +   V + +V+  II G H  S  P ++  ++       P+++  +       E I  V+
Sbjct: 161 KFFGVHIDEVRTRII-GEHGDSMVPLLSATSIGG----IPIQKFERFKELPIDEIIEDVK 215

Query: 230 QRGAAIIKARKLSSALSAASSACD----HIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 285
            +G  II+  K  S    A++  +     + +      E   +++  Y DG ++    + 
Sbjct: 216 TKGEQIIR-LKGGSEFGPAAAILNVVRCIVNN------EKRLLTLSAYVDGEFDGIRDVC 268

Query: 286 YSFPVT-CRNGEWTIVQGLSIDEFSRKKLDLTAEELSE 322
              PV   R+G   +V  + +D+        +AE + +
Sbjct: 269 IGVPVKIGRDGIEEVVS-IELDKDEIIAFRKSAEIIKK 305

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} Length = 314

 Score = 83.7 bits (208), Expect = 2e-18
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 41/259 (15%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP 64
           ++V V GA G +G  +   +A        + V++  +DI        G  +++ +++   
Sbjct: 1   MKVTVIGA-GNVGATVAECVA---RQDVAKEVVM--VDIKD--GMPQGKALDMRESSPIH 52

Query: 65  LLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN 124
                V  T+        ++ ++  G PR  GM R D+++KN  I         +  +P+
Sbjct: 53  GFDTRVTGTNDYGPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPD 111

Query: 125 CKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKL 172
             ++VVANP +    +  E             +    NR +G             I+E+L
Sbjct: 112 STIIVVANPLDVMTYVAYEA------------SGFPTNRVMGMAGVLDTGRFRSFIAEEL 159

Query: 173 NVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRG 232
           +V V DV+ +++ G H  +  P   + TV       PV +L+ D      E +   +  G
Sbjct: 160 DVSVRDVQALLM-GGHGDTMVPLPRYTTVGG----IPVPQLIDDARI--EEIVERTKGAG 212

Query: 233 AAIIKARKLSSALSAASSA 251
             I+     S+  +  ++A
Sbjct: 213 GEIVDLMGTSAWYAPGAAA 231

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Length = 328

 Score = 83.3 bits (207), Expect = 3e-18
 Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 36/203 (17%)

Query: 69  VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL 128
           +    +  E     ++ ++  G PRK  M R D+++ N  I  + A  + ++  PN  V+
Sbjct: 71  IFGENNY-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKY-CPNAFVI 128

Query: 129 VVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNVQV 176
            + NP +      KE             + +  N+  G             +S  L V+ 
Sbjct: 129 CITNPLDAMVYYFKEK------------SGIPANKVCGMSGVLDSARFRCNLSRALGVKP 176

Query: 177 SDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQR----G 232
           SDV  +++ G H     P  +  T+        + + V+    +    I  + ++    G
Sbjct: 177 SDVSAIVV-GGHGDEMIPLTSSVTIGG----ILLSDFVEQG-KITHSQINEIIKKTAFGG 230

Query: 233 AAIIKARKLSSALSAASSACDHI 255
             I++  K  SA  A +++   +
Sbjct: 231 GEIVELLKTGSAFYAPAASAVAM 253

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Length = 310

 Score = 82.2 bits (204), Expect = 5e-18
 Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 41/259 (15%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP 64
           +++ V GA G +G      +A        + ++L  LD+        G  +++ ++    
Sbjct: 1   MKITVIGA-GNVGATTAFRLA---EKQLARELVL--LDV--VEGIPQGKALDMYESGPVG 52

Query: 65  LLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN 124
           L    V  ++        +I ++  G PRK GM R+D++ KN  I K     + +H + N
Sbjct: 53  LFDTKVTGSNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKN 111

Query: 125 CKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKL 172
             ++VV+NP +    +                + L   R +G             I+ +L
Sbjct: 112 PIIIVVSNPLDIMTHVAWVR------------SGLPKERVIGMAGVLDAARFRSFIAMEL 159

Query: 173 NVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRG 232
            V + D+   ++ G H  +  P V + TV       P+ +L+  +     + +   +  G
Sbjct: 160 GVSMQDINACVL-GGHGDAMVPVVKYTTVAG----IPISDLLPAETI--DKLVERTRNGG 212

Query: 233 AAIIKARKLSSALSAASSA 251
           A I++  K  SA  A +S+
Sbjct: 213 AEIVEHLKQGSAFYAPASS 231

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} Length = 321

 Score = 82.2 bits (204), Expect = 5e-18
 Identities = 40/200 (20%), Positives = 80/200 (40%), Gaps = 35/200 (17%)

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
                +   V  T+  +     ++ ++  G PRK GM R D++  N+ + +     ++ +
Sbjct: 53  CPIEGVDFKVRGTNDYKDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN 112

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------I 168
             PN  V+ + NP +    +L++F            + +  N+ +G             +
Sbjct: 113 -CPNAFVICITNPLDIMVNMLQKF------------SGVPDNKIVGMAGVLDSARFRTFL 159

Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTV 228
           +++LNV V  V+  ++ G H  +  P    + V        + +LVK+   L  E +  +
Sbjct: 160 ADELNVSVQQVQAYVM-GGHGDTMVPLTKMSNVAG----VSLEQLVKEG-KLKQERLDAI 213

Query: 229 QQR----GAAIIKARKLSSA 244
             R    G  I+   K  SA
Sbjct: 214 VSRTRSGGGEIVALLKTGSA 233

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A Length = 326

 Score = 82.3 bits (204), Expect = 6e-18
 Identities = 74/339 (21%), Positives = 138/339 (40%), Gaps = 48/339 (14%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKMELVDAAFP 64
           +V + GAAG IG  L  ++          P++  LH+ D+  A     GV  ++      
Sbjct: 10  KVAILGAAGGIGQPLAMLMKM-------NPLVSVLHLYDVVNA----PGVTADISHMDTG 58

Query: 65  L-LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
             ++G +       A TG+++ ++  G PRK GM R D+   N  I K     + +   P
Sbjct: 59  AVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CP 117

Query: 124 NCKVLVVANPANTNALILKEF---APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180
              V +++NP N+   I  E    A +   K +  +T LD  RA   ++E L +   DV 
Sbjct: 118 RAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVD 177

Query: 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240
             ++ G+   +  P ++     ++  ++ +  L              +Q  G  +++A+ 
Sbjct: 178 VPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDR-----------IQNGGTEVVEAKA 226

Query: 241 ------LSSALSAASSACDHIRD--WVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC 292
                 LS A +A   A   +R      G  E  +VS    ++  +       ++  V  
Sbjct: 227 GAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVS-SQVTELPF-------FASKVRL 278

Query: 293 RNGEWTIVQGL-SIDEFSRKKLDLTAEELSE--EKALAY 328
                  V  L  ++E+ R  L+   +EL+   EK +++
Sbjct: 279 GRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSF 317

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} Length = 308

 Score = 81.0 bits (201), Expect = 1e-17
 Identities = 50/271 (18%), Positives = 97/271 (35%), Gaps = 46/271 (16%)

Query: 69  VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL 128
           +  +    E   G +I ++  G  RK GM R+ ++  N +     A  ++ + A +  V+
Sbjct: 56  ISGSNSY-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY-AKDAIVV 113

Query: 129 VVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNVQV 176
           +  NP +    ++ +             T     R +G             IS+KL V  
Sbjct: 114 ITTNPVDAMTYVMYKK------------TGFPRERVIGFSGILDSARMAYYISQKLGVSF 161

Query: 177 SDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAII 236
             V  +++ G H    +P    ++V       P+  L+  +     E ++     GA I 
Sbjct: 162 KSVNAIVL-GMHGQKMFPVPRLSSVGG----VPLEHLMSKEEI--EEVVSETVNAGAKIT 214

Query: 237 KARKLSS----ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVT- 291
           + R  SS    A     +     RD              +Y  G Y     ++   P   
Sbjct: 215 ELRGYSSNYGPAAGLVLTVEAIKRD------SKRIYPYSLYLQGEYGY-NDIVAEVPAVI 267

Query: 292 CRNGEWTIVQGLSIDEFSRKKLDLTAEELSE 322
            ++G   I++ L + E  ++K D   + + +
Sbjct: 268 GKSGIERIIE-LPLTEDEKRKFDEAVQAVKK 297

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A Length = 303

 Score = 80.6 bits (200), Expect = 1e-17
 Identities = 45/208 (21%), Positives = 76/208 (36%), Gaps = 32/208 (15%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           +V V GAAG +G A    IA   +      V+   +DIP   +   G   +         
Sbjct: 2   KVSVVGAAGTVGAAAGYNIA---LRDIADEVVF--VDIPDKEDDTVGQAADTNHGI-AYD 55

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
                     E   G ++ V+  G PR+ G  R D+   N  I +   S+L++H   +  
Sbjct: 56  SNTRVRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYI 114

Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNV 174
            L  +NP +     L E                   + +G             +SE+ + 
Sbjct: 115 SLTTSNPVDLLNRHLYEA------------GDRSREQVIGFGGRLDSARFRYVLSEEFDA 162

Query: 175 QVSDVKNVIIWGNHSSSQYPDVNHATVN 202
            V +V+  I+ G H  +Q P  +  +V+
Sbjct: 163 PVQNVEGTIL-GEHGDAQVPVFSKVSVD 189

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* Length = 324

 Score = 80.6 bits (200), Expect = 2e-17
 Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 35/200 (17%)

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           +            +   A  G ++ ++  G PRK GM R D++  N+ + +   + ++++
Sbjct: 55  SPVDGFDAKFTGANDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY 114

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------I 168
            AP   V+ + NP +     L++F            + L  ++ +G             +
Sbjct: 115 -APEAFVICITNPLDAMVWALQKF------------SGLPAHKVVGMAGVLDSARFRYFL 161

Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTV 228
           SE+ NV V DV   ++ G H  S  P   ++TV       P+ +LVK   W + + +  +
Sbjct: 162 SEEFNVSVEDVTVFVL-GGHGDSMVPLARYSTVAG----IPLPDLVKMG-WTSQDKLDKI 215

Query: 229 QQR----GAAIIKARKLSSA 244
            QR    GA I+   K  SA
Sbjct: 216 IQRTRDGGAEIVGLLKTGSA 235

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* Length = 309

 Score = 79.8 bits (198), Expect = 3e-17
 Identities = 43/207 (20%), Positives = 78/207 (37%), Gaps = 32/207 (15%)

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           +        V  T+        ++ V+  G PRK GM R+D++  N  I +A  S     
Sbjct: 50  SPIEGFDVRVTGTNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL 109

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------I 168
            +PN  +++V NP +    +  E             +     R +GQ            I
Sbjct: 110 -SPNAVIIMVNNPLDAMTYLAAEV------------SGFPKERVIGQAGVLDAARYRTFI 156

Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTV 228
           + +  V V DV+ +++ G H     P    + ++      PV E +  D     + +   
Sbjct: 157 AMEAGVSVEDVQAMLM-GGHGDEMVPLPRFSCISG----IPVSEFIAPDRL--AQIVERT 209

Query: 229 QQRGAAIIKARKLSSALSAASSACDHI 255
           ++ G  I+   K  SA  A ++A   +
Sbjct: 210 RKGGGEIVNLLKTGSAYYAPAAATAQM 236

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Length = 331

 Score = 79.9 bits (198), Expect = 4e-17
 Identities = 50/276 (18%), Positives = 105/276 (38%), Gaps = 44/276 (15%)

Query: 69  VVATTDAVEACTGVNIAVMVGGFPRKEGME-----RKDVMSKNVSIYKAQASALEQHAAP 123
           V A      A TG +  ++  G  +  G       R D++  N  I +     ++++  P
Sbjct: 66  VRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CP 124

Query: 124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEK 171
              ++VV NP +    ++ E             + +  N   G             +++ 
Sbjct: 125 KTFIIVVTNPLDCMVKVMCEA------------SGVPTNMICGMACMLDSGRFRRYVADA 172

Query: 172 LNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQR 231
           L+V   DV+  +I G H     P V + TVN      P+++ +KD   +  + +  + + 
Sbjct: 173 LSVSPRDVQATVI-GTHGDCMVPLVRYITVNG----YPIQKFIKDG-VVTEKQLEEIAEH 226

Query: 232 ----GAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYS 287
               G  I++     SA  A +++   +    L   E   +   VY +G Y +   +   
Sbjct: 227 TKVSGGEIVRFLGQGSAYYAPAASAVAMATSFLND-EKRVIPCSVYCNGEYGL-KDMFIG 284

Query: 288 FPVT-CRNGEWTIVQGLSIDEFSRKKLDLTAEELSE 322
            P      G   +++ L ++E  +K+   + +++  
Sbjct: 285 LPAVIGGAGIERVIE-LELNEEEKKQFQKSVDDVMA 319

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Length = 317

 Score = 79.1 bits (196), Expect = 6e-17
 Identities = 34/191 (17%), Positives = 67/191 (35%), Gaps = 35/191 (18%)

Query: 70  VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLV 129
           V  TD     +G ++ ++    P +   +R +++  N  I  + A  ++++  PN  V+ 
Sbjct: 61  VIGTDDYADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKY-CPNAFVIC 119

Query: 130 VANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNVQVS 177
           + NP +      ++             + L HN+  G             I++   V  S
Sbjct: 120 ITNPLDVMVSHFQKV------------SGLPHNKVCGMAGVLDSSRFRTFIAQHFGVNAS 167

Query: 178 DVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQR----GA 233
           DV   +I G H     P  +  +V       P+   +K    +  E I  +         
Sbjct: 168 DVSANVI-GGHGDGMVPATSSVSVGG----VPLSSFIKQG-LITQEQIDEIVCHTRIAWK 221

Query: 234 AIIKARKLSSA 244
            +    K  +A
Sbjct: 222 EVADNLKTGTA 232

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Length = 326

 Score = 75.6 bits (187), Expect = 9e-16
 Identities = 52/253 (20%), Positives = 96/253 (37%), Gaps = 43/253 (16%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
             K+  +V++ G  G +G +    +    + G  Q + +  +DI    +   G  ++L +
Sbjct: 5   TDKDHQKVILVGD-GAVGSSYAYAMV---LQGIAQEIGI--VDI--FKDKTKGDAIDLSN 56

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           A  P        +         ++ V+  G P+K G  R D+++KN+ I K+    +   
Sbjct: 57  AL-PFTSPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS 115

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------I 168
              N   LV ANP +       +            L+    NR +G             I
Sbjct: 116 -GFNGIFLVAANPVDILTYATWK------------LSGFPKNRVVGSGTSLDTARFRQSI 162

Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTV 228
           +E +NV    V   I+ G H  +++P  +HA +    G   + E VK    +  + +  +
Sbjct: 163 AEMVNVDARSVHAYIM-GEHGDTEFPVWSHANI---GG-VTIAEWVKAHPEIKEDKLVKM 217

Query: 229 QQR----GAAIIK 237
            +        IIK
Sbjct: 218 FEDVRDAAYEIIK 230

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* Length = 322

 Score = 75.2 bits (186), Expect = 2e-15
 Identities = 53/284 (18%), Positives = 99/284 (34%), Gaps = 64/284 (22%)

Query: 77  EACTGVNIAVMVGGFPRKEGM-----ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131
           +   G ++ ++  GF +  G       R D++  N  I       ++++  PN  ++VV 
Sbjct: 68  DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIVVT 126

Query: 132 NPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNVQVSDV 179
           NP +    +L +             + +  N+ +G             IS+KLNV   DV
Sbjct: 127 NPVDVMVQLLHQH------------SGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDV 174

Query: 180 KNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQR---GAAII 236
              I+ G H +       + TV       P++E + +   ++   +  +  R    A  I
Sbjct: 175 NAHIV-GAHGNKMVLLKRYITVGG----IPLQEFINNK-LISDAELEAIFDRTVNTALEI 228

Query: 237 KARKLSS----ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYN-------VPAGLI 285
                S     A +    A  +++D          +      +G Y         P    
Sbjct: 229 VNLHASPYVAPAAAIIEMAESYLKD------LKKVLICSTLLEGQYGHSDIFGGTPV--- 279

Query: 286 YSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYS 329
               V   NG   +++ L ++   + K D    E    KALA+ 
Sbjct: 280 ----VLGANGVEQVIE-LQLNSEEKAKFDEAIAETKRMKALAHH 318

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Length = 326

 Score = 74.1 bits (183), Expect = 4e-15
 Identities = 53/253 (20%), Positives = 90/253 (35%), Gaps = 42/253 (16%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           M K   +V + GA G +G +    +      G    +++  +D+    E   G  M+L  
Sbjct: 1   MNKHVNKVALIGA-GFVGSSYAFALI---NQGITDELVV--IDV--NKEKAMGDVMDLNH 52

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
                 + V  +    E C   +I  +  G  +K G  R +++ KN+ I+K   S +   
Sbjct: 53  GKAFAPQPVKTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS 112

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------I 168
              +   LV  NP +       +             + L   R +G             +
Sbjct: 113 -GFDGIFLVATNPVDILTYATWK------------FSGLPKERVIGSGTTLDSARFRFML 159

Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTV 228
           SE       +V   II G H  ++ P  +HA V    G  PV ELV+ +     E +  +
Sbjct: 160 SEYFGAAPQNVCAHII-GEHGDTELPVWSHANV---GG-VPVSELVEKNDAYKQEELDQI 214

Query: 229 QQR----GAAIIK 237
                     II+
Sbjct: 215 VDDVKNAAYHIIE 227

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Length = 319

 Score = 72.5 bits (179), Expect = 1e-14
 Identities = 40/248 (16%), Positives = 93/248 (37%), Gaps = 43/248 (17%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
           +++ + G  G++G +    +    M G  + ++L  +D+    +   G  ++L+    P 
Sbjct: 1   MKIGIVGL-GRVGSSTAFALL---MKGFAREMVL--IDV--DKKRAEGDALDLIHGT-PF 51

Query: 66  LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC 125
            +             G ++ ++  G P+K G  R  ++ +N  + K  A  + ++ AP+ 
Sbjct: 52  TRRANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDS 110

Query: 126 KVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLN 173
            V+VV NP +       +             + +D  +  G             I++   
Sbjct: 111 IVIVVTNPVDVLTYFFLKE------------SGMDPRKVFGSGTVLDTARLRTLIAQHCG 158

Query: 174 VQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQR-- 231
                V   +I G H  S+ P  + A +    G  P++ + +     + + +    ++  
Sbjct: 159 FSPRSVHVYVI-GEHGDSEVPVWSGAMI---GG-IPLQNMCQVCQKCDSKILENFAEKTK 213

Query: 232 --GAAIIK 237
                II+
Sbjct: 214 RAAYEIIE 221

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... Length = 331

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 54/284 (19%), Positives = 102/284 (35%), Gaps = 62/284 (21%)

Query: 69  VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL 128
           +V++ D         + ++  G  ++EG  R +++ +NV+I+K     + ++ +P CK+L
Sbjct: 76  IVSSKD-YSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLL 133

Query: 129 VVANPANTNA-LILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNVQ 175
           +V+NP +    +  K             ++    NR +G             + E+L V 
Sbjct: 134 IVSNPVDILTYVAWK-------------ISGFPKNRVIGSGCNLDSARFRYLMGERLGVH 180

Query: 176 VSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNG-----EFITTVQQ 230
                  ++ G H  S  P  +   V   AG   ++ L              +    V  
Sbjct: 181 PLSCHGWVL-GEHGDSSVPVWSGVNV---AG-VSLKSLNPQLGTDADKEQWKDVHKQVVD 235

Query: 231 RGAAIIKARKLSS---ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYS 287
               +IK +  +S    LS A  A   +++            +     G Y +   +  S
Sbjct: 236 SAYEVIKLKGYTSWAIGLSVADLAESIMKN------LRRVHPISTMIKGLYGIKEDVFLS 289

Query: 288 FP-VTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSC 330
            P +  +NG   +V           K+ LT +   EE  L  S 
Sbjct: 290 VPCILGQNGISDVV-----------KVTLTPD---EEARLKKSA 319

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Length = 316

 Score = 71.0 bits (175), Expect = 3e-14
 Identities = 48/253 (18%), Positives = 88/253 (34%), Gaps = 42/253 (16%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
                 RV+V GA G +G + V  +      G    ++L  +D         G  M+   
Sbjct: 2   KNNGGARVVVIGA-GFVGASYVFALM---NQGIADEIVL--IDA--NESKAIGDAMDFNH 53

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
                 K V       + C   ++ V+  G  +K G  R D++ KN++I+++   ++   
Sbjct: 54  GKVFAPKPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS 113

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------I 168
                  LV  NP +       +             + L H R +G             +
Sbjct: 114 -GFQGLFLVATNPVDILTYATWK------------FSGLPHERVIGSGTILDTARFRFLL 160

Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTV 228
            E  +V   +V   II G H  ++ P  + A +       P+R+LV+       + +  +
Sbjct: 161 GEYFSVAPQNVHAYII-GEHGDTELPVWSQAYI---GV-MPIRKLVESKGEEAQKDLERI 215

Query: 229 QQR----GAAIIK 237
                     II+
Sbjct: 216 FVNVRDAAYQIIE 228

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 Length = 330

 Score = 70.4 bits (173), Expect = 7e-14
 Identities = 44/278 (15%), Positives = 90/278 (32%), Gaps = 53/278 (19%)

Query: 69  VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL 128
           +V+  D      G  + V+  G  ++EG  R +++ +NV+I+K     + +H +P+C   
Sbjct: 78  IVSGKD-YSVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKE 135

Query: 129 VVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNVQV 176
           +             +            L+ L  +R +G             + E+L V  
Sbjct: 136 LHPELGTDKNKQDWK------------LSGLPMHRIIGSGCNLDSARFRYLMGERLGVHS 183

Query: 177 SDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQR----G 232
             V   +I G H  S     +            + + V D A+   E I          G
Sbjct: 184 CLVIGWVI-GQHGDSVPSVWSGMWDA------KLHKDVVDSAY---EVIKLKGYTSWAIG 233

Query: 233 AAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC 292
             +     + + ++    +   +   ++         +       Y +   +  S P   
Sbjct: 234 LVVSNPVDVLTYVAWKGCSVADLAQTIMKD-LCRVHPVSTMVKDFYGIKDNVFLSLPCVL 292

Query: 293 RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSC 330
            NG    +   +I +     + L  +   EE+ L  S 
Sbjct: 293 NNG----ISHCNIVK-----MKLKPD---EEQQLQKSA 318

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Length = 318

 Score = 69.1 bits (170), Expect = 2e-13
 Identities = 59/254 (23%), Positives = 99/254 (38%), Gaps = 44/254 (17%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           M K   +V + GA G +G +    +A   +  T   ++L  +D+    E   G  M++  
Sbjct: 3   MVKSRSKVAIIGA-GFVGASAAFTMA---LRQTANELVL--IDV--FKEKAIGEAMDINH 54

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
              P +  +             ++ V+  G  RK G  R D+  KNV I K     + ++
Sbjct: 55  GL-PFMGQMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY 113

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------I 168
              +  +LVV+NP +    ++++             + L   + +G             +
Sbjct: 114 -YNHGVILVVSNPVDIITYMIQK------------WSGLPVGKVIGSGTVLDSIRFRYLL 160

Query: 169 SEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNG-----E 223
           SEKL V V +V   II G H  SQ P  +   +   AG K + E + D           +
Sbjct: 161 SEKLGVDVKNVHGYII-GEHGDSQLPLWSCTHI---AG-KNINEYIDDPKCNFTEEDKKK 215

Query: 224 FITTVQQRGAAIIK 237
               V+  GA IIK
Sbjct: 216 IAEDVKTAGATIIK 229

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A Length = 310

 Score = 68.7 bits (169), Expect = 2e-13
 Identities = 37/217 (17%), Positives = 70/217 (32%), Gaps = 44/217 (20%)

Query: 41  MLDIPPA---AEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGM 97
           ++D+      A A      +++ A  P    V     +     G    V+  G  ++ G 
Sbjct: 30  LVDLDRKLAQAHA-----EDILHAT-PFAHPVWVWAGSYGDLEGARAVVLAAGVAQRPGE 83

Query: 98  ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLT 157
            R  ++ +N  ++      + +  AP   +LV  NP +    +               L+
Sbjct: 84  TRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATNPVDVMTQVAYA------------LS 130

Query: 158 RLDHNRALGQ------------ISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAA 205
            L   R +G             ++E L V    V   ++ G H  S+    + A V    
Sbjct: 131 GLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVL-GEHGDSEVLVWSSAQV---G 186

Query: 206 GEKPVRELVKDDAWLNG-----EFITTVQQRGAAIIK 237
           G  P+ E  +                 V++    II+
Sbjct: 187 G-VPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIE 222

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Length = 319

 Score = 68.7 bits (169), Expect = 2e-13
 Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 37/187 (19%)

Query: 69  VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL 128
           +  + D  E C   ++ V+  G  +K G  R +++   V+I KA    L +  APN   +
Sbjct: 64  IDGSDD-PEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYM 121

Query: 129 VVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNVQV 176
           ++ NP +    + ++            LT L  N+  G             I+++  V V
Sbjct: 122 LITNPVDIATHVAQK------------LTGLPENQIFGSGTNLDSARLRFLIAQQTGVNV 169

Query: 177 SDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD--DAWLNGEFITTVQQR--- 231
            +V   I  G H  S+ P    AT+    G  P+ +         L+ +    + Q    
Sbjct: 170 KNVHAYIA-GEHGDSEVPLWESATI---GG-VPMSDWTPLPGHDPLDADKREEIHQEVKN 224

Query: 232 -GAAIIK 237
               II 
Sbjct: 225 AAYKIIN 231

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Length = 318

 Score = 67.9 bits (167), Expect = 5e-13
 Identities = 38/213 (17%), Positives = 79/213 (37%), Gaps = 38/213 (17%)

Query: 41  MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERK 100
           ++D+    +   G  ++L DA           +     C   ++ V+  G P+K G  R 
Sbjct: 35  IVDV--VKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKDADLVVITAGAPQKPGESRL 91

Query: 101 DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLD 160
           D+++KN++I  +    +      +   LV ANP +       +             +   
Sbjct: 92  DLVNKNLNILSSIVKPVVDS-GFDGIFLVAANPVDILTYATWK------------FSGFP 138

Query: 161 HNRALGQ------------ISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEK 208
             R +G             + ++ NV    V   I+ G H  S++   + AT+      +
Sbjct: 139 KERVIGSGTSLDSSRLRVALGKQFNVDPRSVDAYIM-GEHGDSEFAAYSTATI---GT-R 193

Query: 209 PVRELVKDDAWLNGEFITTVQQR----GAAIIK 237
           PVR++ K+   ++ + +  ++         II 
Sbjct: 194 PVRDVAKEQ-GVSDDDLAKLEDGVRNKAYDIIN 225

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Length = 317

 Score = 67.1 bits (165), Expect = 7e-13
 Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 33/176 (18%)

Query: 77  EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136
             C   ++ V+  G  +K G  R D++SKN+ I+K+    +      +   LV  NP + 
Sbjct: 70  SDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNPVDI 128

Query: 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISEKLNVQVSDVKNVII 184
            A    +             + L   R +G             +SE  +V    V   II
Sbjct: 129 LAYATWK------------FSGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQII 176

Query: 185 WGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEF---ITTVQQRGAAIIK 237
            G H  ++ P  +HA +   AG +P++ L++       +        +     II+
Sbjct: 177 -GEHGDTELPVWSHANI---AG-QPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQ 227

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Length = 304

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 42/205 (20%), Positives = 80/205 (39%), Gaps = 22/205 (10%)

Query: 41  MLDI---PPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGM 97
           ++D       AEA      ++  AA P+  G               + ++  G  +K G 
Sbjct: 30  LVDRDEDRAQAEA-----EDIAHAA-PVSHGTRVWHGGHSELADAQVVILTAGANQKPGE 83

Query: 98  ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLT 157
            R D++ KN  I++     + +  AP+  +LV +NP +    +  + AP      I   T
Sbjct: 84  SRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVDLLTDLATQLAP--GQPVIGSGT 140

Query: 158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD- 216
            LD  R    +++   V  +     ++ G H  S+    + A V   AG  PV + ++  
Sbjct: 141 VLDSARFRHLMAQHAGVDGTHAHGYVL-GEHGDSEVLAWSSAMV---AG-MPVADFMQAQ 195

Query: 217 ----DAWLNGEFITTVQQRGAAIIK 237
               +  +  +     +   A+II+
Sbjct: 196 NLPWNEQVRAKIDEGTRNAAASIIE 220

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Length = 303

 Score = 65.3 bits (160), Expect = 3e-12
 Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 74/306 (24%)

Query: 41  MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERK 100
           +LD+    +         +D     L  V  + D + A     + +              
Sbjct: 44  LLDLSEGTKG------ATMDLEIFNLPNVEISKD-LSASAHSKVVIFTVN-SLGSSQSYL 95

Query: 101 DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLD 160
           DV+  NV +++A   AL  + + +  +LV + P      +  +            L+   
Sbjct: 96  DVVQSNVDMFRALVPALGHY-SQHSVLLVASQPVEIMTYVTWK------------LSTFP 142

Query: 161 HNRALGQ------------ISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEK 208
            NR +G             I+  L  Q S  +  +I G     +    +           
Sbjct: 143 ANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVI-GEQGEDKVLTWSGQEE---VVSH 198

Query: 209 PVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS---ALSAASSACDHIRDWVLGTPEG 265
             +  + +              R   +++ +   S    LS A      + +      + 
Sbjct: 199 TSQVQLSN--------------RAMELLRVKGQRSWSVGLSVADMVDSIVNN------KK 238

Query: 266 TWVSMGVYSDGSYNVPAGLIYSFP-VTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 324
              S+   + G Y++ + +  S P +   NG   ++           K  L  + ++E  
Sbjct: 239 KVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVI-----------KTTLKEDTVTE-- 285

Query: 325 ALAYSC 330
            L  S 
Sbjct: 286 KLQSSA 291

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ojs_A* 2x0i_A* 2x0j_A* Length = 294

 Score = 64.4 bits (158), Expect = 6e-12
 Identities = 53/247 (21%), Positives = 84/247 (34%), Gaps = 55/247 (22%)

Query: 6   VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
           +++   GA G++G           +      + L  +DI  A +   G  M+L  AA   
Sbjct: 1   MKLGFVGA-GRVGSTSAFTCL---LNLDVDEIAL--VDI--AEDLAVGEAMDLAHAA-AG 51

Query: 66  LKG---VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           +     +V   D      G  I V+  G  RK GM R D+  KN  I K  A  + ++ A
Sbjct: 52  IDKYPKIVGGAD-YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-A 109

Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ------------ISE 170
           P  K+LVV NP +    I+ +             +    N   G             +  
Sbjct: 110 PESKILVVTNPMDVMTYIMWKE------------SGKPRNEVFGMGNQLDSQRLKERLYN 157

Query: 171 KLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQ 230
                  +++   I G H  S +   + A      GE     +  D           V+ 
Sbjct: 158 AGAR---NIRRAWIIGEHGDSMFVAKSLADF---DGEVDWEAVEND-----------VRF 200

Query: 231 RGAAIIK 237
             A +IK
Sbjct: 201 VAAEVIK 207

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 Length = 309

 Score = 57.1 bits (139), Expect = 2e-09
 Identities = 27/216 (12%), Positives = 69/216 (31%), Gaps = 42/216 (19%)

Query: 41  MLDIPPA---AEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPR---- 93
            +D   A   A+      ++  DA   L        +   A    ++ +   G  +    
Sbjct: 31  FIDANEAKVKADQ-----IDFQDAMANLEAHGNIVINDWAALADADVVISTLGNIKLQQD 85

Query: 94  KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI 153
               +R   +    S+ ++  + L++    +  ++V++NP +    + +           
Sbjct: 86  NPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDVITALFQH---------- 134

Query: 154 TCLTRLDHNRALGQ------------ISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 201
             +T    ++ +G             + E  ++    V    + G H +SQ+   +   V
Sbjct: 135 --VTGFPAHKVIGTGTLLDTARMQRAVGEAFDLDPRSVSGYNL-GEHGNSQFVAWSTVRV 191

Query: 202 NTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237
               G +P+  L               ++ G  ++ 
Sbjct: 192 ---MG-QPIVTLADAGDIDLAAIEEEARKGGFTVLN 223

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis} Length = 450

 Score = 48.6 bits (115), Expect = 2e-06
 Identities = 33/229 (14%), Positives = 81/229 (35%), Gaps = 37/229 (16%)

Query: 1   MAKEPVRVLVTGAAGQIGYA--LVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL 58
           M+ + +++   G  G  G+A  L+  ++    +     V L+  D+    EA    ++ +
Sbjct: 1   MSLDQIKIAYIGG-GSQGWARSLMSDLSIDERMSGT--VALY--DL--DFEAAQKNEV-I 52

Query: 59  VDAAFPLLKGVVATTDAVEACTGVN---IAVMVGGF---------PRKEGMERKDVMS-- 104
            + +        A +   +A +  +   I+++ G           P + G+ +    +  
Sbjct: 53  GNHSGNGRWRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVG 112

Query: 105 --------KNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL 156
                   + V I+   A A+  +A P   V+   NP +    +L +  P I A      
Sbjct: 113 PGGIIRGLRAVPIFAEIARAIRDYA-PESWVINYTNPMSVCTRVLYKVFPGIKAIGCCHE 171

Query: 157 TRLDHN---RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 202
                      + +       +  D++  ++  NH +      ++  ++
Sbjct: 172 VFGTQKLLAEMVTERLGIEVPRREDIRVNVLGINHFTW-ITKASYRHID 219

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 Length = 472

 Score = 42.8 bits (100), Expect = 9e-05
 Identities = 41/258 (15%), Positives = 78/258 (30%), Gaps = 43/258 (16%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKMEL 58
           M K+   +++ G     G    P I   ++   ++  I  L + D     +       ++
Sbjct: 24  MKKKSFSIVIAGG----GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDV 79

Query: 59  VDAAFPLLKGVVATTDAVEACTGVN---IAVMVGGF---------PRKEGMERKDVMS-- 104
                       ATTD  EA T V+     + VG +         P K G+  ++     
Sbjct: 80  FIREKAPDIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPG 139

Query: 105 ------KNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA-------- 150
                 +++         +E+++ P+  +L  +NPA   A   +   P+           
Sbjct: 140 GIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNPAAIVAEATRRLRPNSKILNICDMPV 198

Query: 151 ---KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGE 207
                +  +  L   + +      LN          I     +   P +         G 
Sbjct: 199 GIEDRMAQILGLSSRKEMKVRYYGLNHFGWWTS---IQDQEGNDLMPKLKEHVSQY--GY 253

Query: 208 KPVRELVKDDAWLNGEFI 225
            P  E    +A  N  F 
Sbjct: 254 IPKTEAEAVEASWNDTFA 271

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 8/71 (11%)

Query: 7  RVLVTGAAGQIGYALVP-MIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL 65
          R+LVTGAAGQ+G  +   +         +   +  +  + PA      V+ +L DA    
Sbjct: 5  RLLVTGAAGQLGRVMRERLAPMA-----EILRLADLSPLDPAGPNEECVQCDLADAN--A 57

Query: 66 LKGVVATTDAV 76
          +  +VA  D +
Sbjct: 58 VNAMVAGCDGI 68

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2 Length = 450

 Score = 41.7 bits (97), Expect = 2e-04
 Identities = 34/212 (16%), Positives = 68/212 (32%), Gaps = 34/212 (16%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKM-- 56
           M K  +++   G     G +  P +  G++    +  +  L ++DIP   E L  V    
Sbjct: 4   MDK-RLKIATIGG----GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALA 58

Query: 57  ELVDAAFPLLKGVVATTDAVEACTGVN---IAVMVGGF---------PRKEGMERKDVMS 104
           + +     +   +  T D   A  G +       VGG          P K G+  ++   
Sbjct: 59  KRMVEKAGVPIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNG 118

Query: 105 --------KNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL 156
                   + + +       +E+   P+  ++   NPA      +  +        + C 
Sbjct: 119 PGGLFKGLRTIPVILDIIRDMEELC-PDAWLINFTNPAGMVTEAVLRYTKQEKVVGL-CN 176

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188
             +     + ++   L V    V       NH
Sbjct: 177 VPIGMRMGVAKL---LGVDADRVHIDFAGLNH 205

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 9/83 (10%)

Query: 1  MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI--PPAAEALNG----V 54
          +  + + + + GAAG +G  L   + +   LG        ++D+  P A    +G     
Sbjct: 10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDAR 69

Query: 55 KMELVDAAFPLLKGVVAT-TDAV 76
            +L        + +V    D +
Sbjct: 70 AADLSAPG--EAEKLVEARPDVI 90

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	332
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	100.0
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	100.0
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	100.0
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	100.0
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	100.0
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	100.0
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	100.0
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	100.0
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	100.0
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	100.0
3tl2_A	315	Malate dehydrogenase; center for structural genomi	100.0
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	100.0
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	100.0
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	100.0
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	100.0
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	100.0
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	100.0
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	100.0
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	100.0
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	100.0
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	100.0
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	100.0
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	100.0
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	100.0
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	100.0
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	100.0
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	100.0
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	100.0
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	100.0
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	100.0
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	100.0
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	100.0
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	100.0
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	100.0
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	100.0
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	100.0
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	100.0
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	100.0
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	100.0
1up7_A	417	6-phospho-beta-glucosidase; hydrolase, family4 hyd	100.0
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	100.0
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	100.0
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	100.0
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	99.97
3u95_A	477	Glycoside hydrolase, family 4; hydrolysis, cytosol	99.96
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	99.05
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.83
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.82
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.81
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	98.8
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.77
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.76
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	98.74
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	98.74
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	98.72
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.71
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	98.69
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	98.67
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	98.67
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	98.66
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.64
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	98.63
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	98.62
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	98.62
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.62
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	98.62
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	98.61
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.59
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	98.59
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.58
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	98.57
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	98.56
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	98.56
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	98.56
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	98.55
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.55
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.55
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	98.54
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	98.54
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	98.53
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.52
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	98.52
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	98.52
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.51
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.51
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.49
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	98.48
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	98.47
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	98.47
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	98.46
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	98.45
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	98.45
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	98.44
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	98.43
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	98.43
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	98.43
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	98.43
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.42
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.42
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	98.42
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	98.42
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	98.42
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.41
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.41
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	98.41
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	98.4
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	98.39
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	98.39
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.39
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	98.38
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	98.38
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.37
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.37
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	98.36
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	98.36
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.31
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.31
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.3
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	98.3
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	98.29
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.29
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	98.29
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	98.28
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	98.28
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	98.28
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	98.28
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.27
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	98.27
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	98.26
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	98.25
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	98.24
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	98.24
4f6c_A	427	AUSA reductase domain protein; thioester reductase	98.24
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.23
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	98.23
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	98.23
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.22
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	98.21
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	98.21
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	98.2
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.2
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	98.2
1xq6_A	253	Unknown protein; structural genomics, protein stru	98.2
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.19
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	98.19
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	98.18
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	98.18
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	98.17
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	98.17
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	98.16
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	98.16
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	98.16
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.15
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	98.15
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	98.15
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	98.14
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	98.14
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.14
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	98.14
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.13
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	98.13
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.12
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.12
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.12
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.12
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.11
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.11
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	98.11
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.11
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	98.11
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.1
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.1
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	98.1
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	98.09
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.09
1yj8_A	375	Glycerol-3-phosphate dehydrogenase; SGPP, structur	98.09
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.09
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	98.08
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	98.08
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	98.08
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.08
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.07
1xq1_A	266	Putative tropinone reducatse; structural genomics,	98.07
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.07
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.07
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	98.07
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	98.06
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	98.06
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.06
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	98.05
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.05
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	98.05
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	98.05
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.05
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.05
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	98.05
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.04
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	98.04
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	98.04
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.03
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.03
3qha_A	296	Putative oxidoreductase; seattle structural genomi	98.03
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.03
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.03
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.03
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.02
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	98.02
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	98.02
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	98.02
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.02
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	98.01
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.01
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.01
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	98.01
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	98.01
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.01
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	98.01
4fgw_A	391	Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi	98.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.99
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.99
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.98
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	97.98
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.97
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.97
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.97
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.97
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	97.97
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.97
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.96
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.96
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.96
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.96
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.95
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.95
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	97.94
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.94
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.94
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.94
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.94
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.94
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.94
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	97.93
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	97.93
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.93
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	97.92
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.92
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.92
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	97.92
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.92
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.91
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.91
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.91
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.9
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.9
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.9
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.9
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.89
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.89
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.89
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.89
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.89
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.89
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.88
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.88
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.88
1spx_A	278	Short-chain reductase family member (5L265); paral	97.88
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.88
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.88
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.88
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.88
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.87
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.87
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.87
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.87
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.87
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.86
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.86
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.86
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.86
4f6l_B	508	AUSA reductase domain protein; thioester reductase	97.85
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.85
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.85
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.85
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.85
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.84
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.84
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.84
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.84
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.84
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.84
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	97.83
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.83
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.83
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.83
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.83
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.82
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.82
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	97.82
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.82
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.82
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.82
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.81
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.81
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.81
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.81
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.8
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.8
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.8
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	97.8
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.8
2qyt_A	317	2-dehydropantoate 2-reductase; APC81190, porphyrom	97.8
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	97.8
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.79
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.79
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	97.79
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.78
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.78
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.78
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.78
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.77
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.77
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.77
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	97.77
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.76
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.76
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.76
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.76
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.75
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.75
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.75
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.75
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.75
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	97.75
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.74
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.74
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.74
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.74
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	97.72
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.72
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	97.72
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.72
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.72
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	97.72
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.72
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.71
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.71
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	97.71
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	97.71
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	97.71
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.71
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.7
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.7
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.7
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.7
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.69
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.69
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.69
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.68
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	97.68
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.68
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	97.67
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.67
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.67
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.66
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.65
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.64
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.64
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.64
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.63
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.63
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.63
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.62
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.61
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.61
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.61
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.61
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.6
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.6
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.6
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.6
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.6
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.6
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	97.59
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.58
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.58
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.56
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.55
3ego_A	307	Probable 2-dehydropantoate 2-reductase; structural	97.55
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.54
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.54
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.54
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	97.53
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.52
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	97.52
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.51
3c7a_A	404	Octopine dehydrogenase; L) stereospecific opine de	97.5
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.5
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.5
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.5
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.49
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	97.48
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.48
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.47
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.45
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.45
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.41
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.38
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.38
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.37
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.37
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	97.34
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.34
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.33
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.31
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.3
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.29
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	97.28
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.28
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	97.26
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.25
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.25
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.21
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.21
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.18
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.14
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.05
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.03
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	97.01
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.01
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.01
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.98
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.98
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.93
3dfu_A	232	Uncharacterized protein from 6-phosphogluconate de	96.92
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	96.91
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	96.88
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.87
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.87
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.83
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	96.82
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.8
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	96.79
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.79
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.78
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.73
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	96.7
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	96.67
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	96.67
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.64
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.63
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	96.58
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.56
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	96.54
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.51
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	96.51
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.49
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.47
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	96.44
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.44
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	96.44
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.42
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.4
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.4
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.34
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	96.33
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.31
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.31
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.31
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	96.3
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.29
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.28
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.19
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.18
3m2t_A	359	Probable dehydrogenase; PSI, SGXNY, structural gen	96.17
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	96.14
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	96.09
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	96.06
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.06
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.05
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	96.04
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.03
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	96.02
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.01
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	95.97
1tlt_A	319	Putative oxidoreductase (virulence factor MVIM HO;	95.96
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.96
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.95
3fr7_A	525	Putative ketol-acid reductoisomerase (OS05G057370	95.94
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.94
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	95.94
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	94.92
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	95.92
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.91
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	95.91
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.91
3bio_A	304	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.9

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=100.00  E-value=5.7e-73  Score=531.16  Aligned_cols=324  Identities=42%  Similarity=0.650  Sum_probs=295.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +++||+||||+|+||+++++.|+..+++++++++.++++|++.++++++|.++||+|+.+++..++.++++.+++++|||
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daD  110 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD  110 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCC
Confidence            46799999988999999999999999998666566667777666778999999999998777777888889999999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR  163 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r  163 (332)
                      +||++||.||+||++|+|++..|+++++++++.|.+++.|++++|++|||+|++|++++++++++|+++|+++|.||++|
T Consensus       111 vVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia~k~sg~~~~rvig~gT~LDsaR  190 (375)
T 7mdh_A          111 WALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHALTRLDENR  190 (375)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHH
T ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHHHHHcCCCCccEEEeeehHHHHH
Confidence            99999999999999999999999999999999999984478999999999999999999986556666699999999999


Q ss_pred             HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccc
Q 020022          164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS  243 (332)
Q Consensus       164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~  243 (332)
                      |++++|+++|++|++|++++||||||+++||+||+++|    +|+|+.+++.++.|..+++.+++++++++|++.||+++
T Consensus       191 ~r~~lA~~lgv~~~~V~~v~V~GeHgdt~vp~~S~a~V----~G~pl~~~~~~~~~~~~~i~~~v~~~g~eII~~kG~ts  266 (375)
T 7mdh_A          191 AKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKI----DGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKWGRSS  266 (375)
T ss_dssp             HHHHHHHHTTSCGGGEECCEEEBCSSTTCEEECSSCEE----TTEEGGGTCCCHHHHHHHHHHHHHTHHHHHHHHTSSCC
T ss_pred             HHHHHHHHhCcChhhcccceEEecCCCceeeeeecccC----CCEEhhHhccchhhHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            99999999999999999866799999999999999999    99999998877778778999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHcCCCCceEEEeeeecCC-CCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHH
Q 020022          244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELS  321 (332)
Q Consensus       244 ~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g-~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  321 (332)
                      +.+++.++++.|.+|+.+.++++++|+|++++| +||+|+|+|||+||++ ++|++++++.++|+++|+++|++|+++|+
T Consensus       267 ~a~aa~~i~~~i~~~l~g~d~~~v~~vs~~~~G~~YGi~~dv~~s~P~vlg~~Gv~~iv~~l~L~~~E~~~l~~Sa~~L~  346 (375)
T 7mdh_A          267 AASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAELL  346 (375)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCTTCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCCCCCeEEEEEEEeCCccCCCCCceEEEEEEEEcCCeeEEecCCCCCCHHHHHHHHHHHHHHH
Confidence            876777889988888875338999999999999 7999999999999997 89999999558999999999999999999


Q ss_pred             HHHHHHhhhh
Q 020022          322 EEKALAYSCL  331 (332)
Q Consensus       322 ~~~~~~~~~~  331 (332)
                      ++++.+.++|
T Consensus       347 ~e~~~~~~~~  356 (375)
T 7mdh_A          347 AEKKCVAHLT  356 (375)
T ss_dssp             HHHHHTHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988776

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=100.00  E-value=5.6e-72  Score=521.37  Aligned_cols=327  Identities=61%  Similarity=0.965  Sum_probs=295.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +++||+||||+|+||+++++.|+..++++++++++|+|+|+++.+++++|.++||+|+.+++..++..+++.+++++|||
T Consensus         2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daD   81 (333)
T 5mdh_A            2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD   81 (333)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCC
Confidence            57899999989999999999999999988777778999999865578899999999987666677888888999999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR  163 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r  163 (332)
                      +||++||.|+++|++|+|++..|+++++++++.+++++|+.+++|++|||+|++|++++++++++|+++|+++|.||++|
T Consensus        82 vVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~~~~~~~~~~p~~~ig~~t~LDs~R  161 (333)
T 5mdh_A           82 VAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNR  161 (333)
T ss_dssp             EEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHH
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHHHHHHHcCCCCcCEEEEEEhHHHHH
Confidence            99999999999999999999999999999999999999654479999999999999999985467777799999999999


Q ss_pred             HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcc--hhhhhhhcccchhHHHHHHHhhHHHHHHhcCc
Q 020022          164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKP--VRELVKDDAWLNGEFITTVQQRGAAIIKARKL  241 (332)
Q Consensus       164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~--~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~  241 (332)
                      +++++|+++|++|++|++++||||||+++||+||+++++.  +|.|  +.+++.++.|..+++.+++++++++|++.||+
T Consensus       162 ~~~~la~~l~v~~~~v~~~vV~GeHgds~vp~~S~a~v~i--~g~~~~~~~~~~~~~~~~~~~~~~v~~~g~eIi~~k~~  239 (333)
T 5mdh_A          162 AKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKL--QAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARKL  239 (333)
T ss_dssp             HHHHHHHHHTCCGGGEECCEEEBCSSTTCEEECTTCEEEC--SSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHhCcCHHHeeecEEEEcCCCCEEEeeeccEecc--CCeeccHHHhhccccccHHHHHHHHHHHHHHHHHccCc
Confidence            9999999999999999998779999999999999998632  5765  45777666787789999999999999998888


Q ss_pred             cchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCC-CCCCCCceEEEEeeEecCCcEEEecCCCCCHHHHHHHHHHHHHH
Q 020022          242 SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEEL  320 (332)
Q Consensus       242 ~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g-~ygi~~~~~~s~Pv~~~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  320 (332)
                      ++.+++|.++++++++|+.++++++++|+|++++| +||+|+|+|||+||++++|+++++++++|+++|+++|++|+++|
T Consensus       240 ssa~~~a~~~~~~~~~il~~~~~~~v~~~s~~~~G~~YGi~~~v~~s~P~~~~~Gv~~iv~~l~L~~~E~~~l~~sa~~L  319 (333)
T 5mdh_A          240 SSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKEL  319 (333)
T ss_dssp             CCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEECTTCSSSCCSSCEEEEEEEEETTEEEECCCCCCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCeEEEEEEecCCcccCCCCCeEEEEEEEEcCCeEEEcCCCCCCHHHHHHHHHHHHHH
Confidence            77777788899999988877644789999999999 99998899999999889999999865899999999999999999


Q ss_pred             HHHHHHHhhhhC
Q 020022          321 SEEKALAYSCLS  332 (332)
Q Consensus       321 ~~~~~~~~~~~~  332 (332)
                      +++++.+.+||+
T Consensus       320 ~~~~~~~~~~l~  331 (333)
T 5mdh_A          320 AEEKETAFEFLS  331 (333)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999999974

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=100.00  E-value=7.3e-71  Score=514.16  Aligned_cols=320  Identities=56%  Similarity=0.899  Sum_probs=284.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      |.+.||+|+||+|.||++++++|++..++++.++.+|+|+|+++..+.++|.++||+|++++...++..+++.+++++||
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~a  101 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGV  101 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTC
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCC
Confidence            34579999998899999999999999999877788999999987667789999999999888888888889999999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC-CcEEEechHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA-KNITCLTRLDH  161 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~-~~i~~~t~lds  161 (332)
                      |+||++||.||+||++|+|++..|++|++++++.|.++|+|+++|+++|||+|++++++++.++|+++ ++|+++|.||+
T Consensus       102 dvVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~~~~~~g~~~~r~i~~~t~LDs  181 (345)
T 4h7p_A          102 AIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALILLKSAQGKLNPRHVTAMTRLDH  181 (345)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHHTTTCSCGGGEEECCHHHH
T ss_pred             CEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHHHHHccCCCCcceeeeccchhH
Confidence            99999999999999999999999999999999999999988999999999999999999987677654 45999999999


Q ss_pred             HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCc
Q 020022          162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKL  241 (332)
Q Consensus       162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~  241 (332)
                      +|+++++|+++|++|++|++++|||+||+++||+||++++    +|.|+.+++.+ +|..+++.+++++++++|++.||+
T Consensus       182 ~R~~~~la~~~~v~~~~V~~~~V~G~HG~t~vp~~s~a~v----~g~~~~~~~~~-~~~~~~~~~~v~~~g~eIi~~kg~  256 (345)
T 4h7p_A          182 NRALSLLARKAGVPVSQVRNVIIWGNHSSTQVPDTDSAVI----GTTPAREAIKD-DALDDDFVQVVRGRGAEIIQLRGL  256 (345)
T ss_dssp             HHHHHHHHHHHTSCGGGEECCEEEBCSSTTCEEECTTCEE----TTEEGGGGCCC-------HHHHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHCcChhheecceeecCCCCeEEeeeccceE----CCccHHHhcch-hhHHHHHHHHHHhhhhhhhhcCCC
Confidence            9999999999999999999888899999999999999999    99999988765 455568999999999999999998


Q ss_pred             cchHHHHHHHHHHHHHHHcCCCCceEEEeeeec-CCCCCCCCceEEEEeeEecCCcEEEecCCCCCHHHHHHHHHHHHHH
Q 020022          242 SSALSAASSACDHIRDWVLGTPEGTWVSMGVYS-DGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEEL  320 (332)
Q Consensus       242 ~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~-~g~ygi~~~~~~s~Pv~~~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  320 (332)
                      ++++++|.++++++.+|+.+.+...++++++++ +|+||+|+|+|||+||++++|++++++.++|+++|+++|++|+++|
T Consensus       257 ss~~s~a~a~~~~~~~~l~~~~~~~~vs~~v~s~~g~YGi~~~v~~s~Pv~~~~G~~~iv~~l~l~~~e~~~l~~s~~~L  336 (345)
T 4h7p_A          257 SSAMSAAKAAVDHVHDWIHGTPEGVYVSMGVYSDENPYGVPSGLIFSFPCTCHAGEWTVVSGKLNGDLGKQRLASTIAEL  336 (345)
T ss_dssp             CCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEECTTCTTCCCSSCEEEEEEEEETTEEEECCSCC-----CGGGHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHhcCCCCceEEEEEEEeCCCCcCCCCCEEEEEEEEEeCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            888888999999999988877667778888877 5899999999999999988899999887899999999999999999


Q ss_pred             HHHHHHH
Q 020022          321 SEEKALA  327 (332)
Q Consensus       321 ~~~~~~~  327 (332)
                      +++.+.+
T Consensus       337 ~~E~~~A  343 (345)
T 4h7p_A          337 QEERAQA  343 (345)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHc
Confidence            9987654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=100.00  E-value=8.1e-67  Score=484.92  Aligned_cols=306  Identities=23%  Similarity=0.312  Sum_probs=275.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-cceEeeCChhhhc
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~~~~~~~~~~~al   79 (332)
                      |++.++||+||| +|.||+++++.|+..++++     +|+|+|++  ++++++.++||+|+ .+.. .++.++++.++++
T Consensus         1 m~~~~~kI~ViG-aG~vG~~~a~~l~~~~~~~-----~l~l~D~~--~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~   71 (326)
T 3pqe_A            1 MNKHVNKVALIG-AGFVGSSYAFALINQGITD-----ELVVIDVN--KEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDC   71 (326)
T ss_dssp             -CCSCCEEEEEC-CSHHHHHHHHHHHHHTCCS-----EEEEECSC--HHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGG
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHhCCCCc-----eEEEEecc--hHHHHHHHHHHHhc-cccccCCeEEEeCcHHHh
Confidence            777789999999 5999999999999988765     89999997  57899999999998 3433 4555666678999


Q ss_pred             CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE-ech
Q 020022           80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC-LTR  158 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~  158 (332)
                      ++||+||+++|.|+++|++|.|++..|+++++++++.|.++| |+++++++|||+|++|++++++ +|+|++|++| ||.
T Consensus        72 ~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~-p~a~vlvvtNPvd~~t~~~~k~-~g~p~~rviG~gt~  149 (326)
T 3pqe_A           72 KDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASG-FDGIFLVATNPVDILTYATWKF-SGLPKERVIGSGTT  149 (326)
T ss_dssp             TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTH
T ss_pred             CCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcCChHHHHHHHHHHh-cCCCHHHEEeeccc
Confidence            999999999999999999999999999999999999999999 5899999999999999999998 7999999655 699


Q ss_pred             HHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh----cccchhHHHHHHHhhHHH
Q 020022          159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQQRGAA  234 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~----~~~~~~~~~~~v~~~~~~  234 (332)
                      ||+.|+++++|+++|++|++|+++ ||||||+++||+||++++    +|.|+.+++++    +.|..+++.+++++++++
T Consensus       150 LD~~R~~~~la~~lgv~~~~V~~~-V~GeHG~t~vp~~S~~~v----~g~p~~~~~~~~~~~~~~~~~~i~~~v~~~g~e  224 (326)
T 3pqe_A          150 LDSARFRFMLSEYFGAAPQNVCAH-IIGEHGDTELPVWSHANV----GGVPVSELVEKNDAYKQEELDQIVDDVKNAAYH  224 (326)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEECC-EEBSSSTTCEECGGGCEE----TTEEHHHHHHTCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhCCCHHHceee-eeecCCCceeeeeeeeeE----CCEEHHHHhhcccCCCHHHHHHHHHHHHhhhhe
Confidence            999999999999999999999987 699999999999999999    99999998765    456778999999999999


Q ss_pred             HHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          235 IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       235 i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                      |+++||++++. +|.++++++.+ |+.| +++++|+|++++|+||++ |+|||+||++ ++|++++++ ++|+++|+++|
T Consensus       225 Ii~~kG~t~~a-~a~a~~~~~~a-il~~-~~~v~~~s~~~~g~yg~~-~v~~s~P~~lg~~Gv~~iv~-l~L~~~E~~~l  299 (326)
T 3pqe_A          225 IIEKKGATYYG-VAMSLARITKA-ILHN-ENSILTVSTYLDGQYGAD-DVYIGVPAVVNRGGIAGITE-LNLNEKEKEQF  299 (326)
T ss_dssp             HHHHHSCCCHH-HHHHHHHHHHH-HHTT-CCEEECCEEEEESGGGCE-EEEEECCEEEETTEEEEECC-CCCCHHHHHHH
T ss_pred             eeeCCCCcHHH-HHHHHHHHHHH-HhcC-CCcEEEEEEeeccccCCC-ceEEEEEEEEcCCceEEEec-CCCCHHHHHHH
Confidence            99999977665 46688997766 5666 899999999999999995 9999999987 999999998 99999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 020022          314 DLTAEELSEEKALA  327 (332)
Q Consensus       314 ~~s~~~i~~~~~~~  327 (332)
                      ++|++.|++.++.+
T Consensus       300 ~~s~~~l~~~~~~~  313 (326)
T 3pqe_A          300 LHSAGVLKNILKPH  313 (326)
T ss_dssp             HHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999988653

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=100.00  E-value=2.4e-67  Score=487.70  Aligned_cols=304  Identities=22%  Similarity=0.332  Sum_probs=256.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .++||+||| +|.||+++++.|+..++++     +|+|+|++  +++++|.++||+|+.. +..++.++++.+++++|||
T Consensus         8 ~~~kV~ViG-aG~vG~~~a~~l~~~~~~~-----el~l~D~~--~~k~~g~a~DL~~~~~-~~~~~~i~~~~~~a~~~aD   78 (326)
T 3vku_A            8 DHQKVILVG-DGAVGSSYAYAMVLQGIAQ-----EIGIVDIF--KDKTKGDAIDLEDALP-FTSPKKIYSAEYSDAKDAD   78 (326)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHTCCS-----EEEEECSC--HHHHHHHHHHHHTTGG-GSCCCEEEECCGGGGTTCS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCC-----eEEEEeCC--hHHHHHHHhhHhhhhh-hcCCcEEEECcHHHhcCCC
Confidence            468999999 5999999999999998876     89999997  5789999999999863 3346667777899999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE-echHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC-LTRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~lds~  162 (332)
                      +||+++|.+++||++|+|++.+|+++++++++.|.++| |+++++++|||+|++|++++++ +++|++|++| ||.||+.
T Consensus        79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~ilvvtNPvdi~t~~~~k~-~g~p~~rviG~gt~LD~~  156 (326)
T 3vku_A           79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPVDILTYATWKL-SGFPKNRVVGSGTSLDTA  156 (326)
T ss_dssp             EEEECCCCC----------------CHHHHHHHHHTTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHH
T ss_pred             EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEccCchHHHHHHHHHh-cCCCHHHeeeecccCcHH
Confidence            99999999999999999999999999999999999999 5899999999999999999998 7999999655 6999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh----cccchhHHHHHHHhhHHHHHHh
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQQRGAAIIKA  238 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~----~~~~~~~~~~~v~~~~~~i~~~  238 (332)
                      |+++++|+++|++|++|+++ ||||||+++||+||+++|    +|+|+.+++.+    +.|..+++.+++++++++|+++
T Consensus       157 R~~~~la~~lgv~~~~V~~~-ViGeHGdt~vp~~S~a~v----~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~  231 (326)
T 3vku_A          157 RFRQSIAKMVNVDARSVHAY-IMGEHGDTEFPVWSHANI----GGVTIAEWVKAHPEIKEDKLVKMFEDVRNKAYEIIKL  231 (326)
T ss_dssp             HHHHHHHHHHTSCGGGEECC-EEBSSSTTCEECGGGCEE----TTEEHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHCeEE-EEcCCCCeeEEeeecccc----CCEEHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999987 699999999999999999    99999998765    4577789999999999999999


Q ss_pred             cCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHH
Q 020022          239 RKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTA  317 (332)
Q Consensus       239 kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~  317 (332)
                      ||++++.+ |.++++++.+ |++| +++++|+|++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|+
T Consensus       232 kG~t~~a~-a~a~~~~~~a-il~~-~~~v~~~s~~~~g~yg~-~~v~~s~P~~lg~~Gv~~iv~-l~L~~~E~~~l~~sa  306 (326)
T 3vku_A          232 KGATFYGI-ATALARISKA-ILND-ENAVLPLSVYMDGQYGL-NDIYIGTPAVINRNGIQNILE-IPLTDHEEESMQKSA  306 (326)
T ss_dssp             HSCCCHHH-HHHHHHHHHH-HHTT-CCEEEEEEEEEEEGGGE-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHH
T ss_pred             CCCchHHH-HHHHHHHHHH-HhcC-CCceEEEEeeccCccCC-CceEEEEEEEEcCCceEEEec-CCCCHHHHHHHHHHH
Confidence            99877654 5688887765 6667 89999999999999999 59999999986 999999998 999999999999999


Q ss_pred             HHHHHHHHHHh
Q 020022          318 EELSEEKALAY  328 (332)
Q Consensus       318 ~~i~~~~~~~~  328 (332)
                      ++|++.++.+.
T Consensus       307 ~~L~~~~~~~~  317 (326)
T 3vku_A          307 SQLKKVLTDAF  317 (326)
T ss_dssp             HHHHCC-----
T ss_pred             HHHHHHHHHHH
Confidence            99999887653

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=100.00  E-value=2.9e-66  Score=481.46  Aligned_cols=300  Identities=20%  Similarity=0.331  Sum_probs=267.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~~~~~~~~~~~~~~al~~a   82 (332)
                      +++||+||| +|.||+++++.|+..++.+     +++|+|++  +++++|.++||+|+. ++....+..+ +.+++++||
T Consensus        18 ~~~kV~ViG-aG~vG~~~a~~l~~~~~~~-----el~L~Di~--~~~~~g~a~DL~~~~~~~~~~~i~~~-~d~~~~~~a   88 (331)
T 4aj2_A           18 PQNKITVVG-VGAVGMACAISILMKDLAD-----ELALVDVI--EDKLKGEMMDLQHGSLFLKTPKIVSS-KDYSVTANS   88 (331)
T ss_dssp             CSSEEEEEC-CSHHHHHHHHHHHHTTCCS-----EEEEECSC--HHHHHHHHHHHHHTGGGCSCCEEEEC-SSGGGGTTE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCc-----eEEEEeCC--hHHHHHHHHhhhhhhhccCCCeEEEc-CCHHHhCCC
Confidence            458999999 5999999999999987655     89999998  478999999999985 3333344444 456789999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDH  161 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds  161 (332)
                      |+||+++|.|++||++|+|++.+|+++++++++.|.++| |+++++++|||+|++|++++++ +++|++|+ +.||.||+
T Consensus        89 DiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~vlvvtNPvdi~t~~~~k~-sg~p~~rviG~gt~LD~  166 (331)
T 4aj2_A           89 KLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS-PQCKLLIVSNPVDILTYVAWKI-SGFPKNRVIGSGCNLDS  166 (331)
T ss_dssp             EEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHH
T ss_pred             CEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecChHHHHHHHHHHH-hCCCHHHEEeeccccHH
Confidence            999999999999999999999999999999999999998 6899999999999999999998 69999995 65699999


Q ss_pred             HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhh-------hcccchhHHHHHHHhhHHH
Q 020022          162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK-------DDAWLNGEFITTVQQRGAA  234 (332)
Q Consensus       162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~-------~~~~~~~~~~~~v~~~~~~  234 (332)
                      .|+++++|+++|++|++|+++ ||||||+++||+||+++|    +|.|+.+++.       ++.|  +++.+++++++++
T Consensus       167 ~R~~~~la~~lgv~~~~V~~~-ViGeHG~s~vp~~S~~~v----~G~p~~~~~~~~~~~~~~~~~--~~i~~~v~~~g~e  239 (331)
T 4aj2_A          167 ARFRYLMGERLGVHPLSCHGW-VLGEHGDSSVPVWSGVNV----AGVSLKSLNPQLGTDADKEQW--KDVHKQVVDSAYE  239 (331)
T ss_dssp             HHHHHHHHHHHTSCGGGCBCC-EEBCSSTTCEECGGGCEE----TTEEHHHHCTTTTSTTCTTCT--HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHCEEe-EEecCCCceeEeeecCeE----CCEEHHHHHhhccCCCCHHHH--HHHHHHHHHhHHH
Confidence            999999999999999999987 599999999999999999    9999998864       2345  6999999999999


Q ss_pred             HHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          235 IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       235 i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                      |++.||++++ ++|.++++++.+ ++.| ++.++|+|++++|+||+++++|||+||++ ++|++++++ ++|+++|+++|
T Consensus       240 Ii~~kg~t~~-a~a~a~a~~~~a-il~d-~~~~~~vs~~~~g~ygi~~~v~~s~P~~lg~~Gv~~iv~-l~L~~~E~~~l  315 (331)
T 4aj2_A          240 VIKLKGYTSW-AIGLSVADLAES-IMKN-LRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVK-VTLTPDEEARL  315 (331)
T ss_dssp             HHHHHSSCCH-HHHHHHHHHHHH-HHTT-CCEEEEEEEECTTGGGCCSCCEEEEEEEEETTEEEEEEC-CCCCHHHHHHH
T ss_pred             HhhcCCCCch-hHHHHHHHHHHH-HHhC-CCCeEEEEEecCCccCCcCceEEEEEEEEcCCeeEEEcc-CCCCHHHHHHH
Confidence            9999998776 456688887765 6667 89999999999999999889999999987 999999998 99999999999


Q ss_pred             HHHHHHHHHHHH
Q 020022          314 DLTAEELSEEKA  325 (332)
Q Consensus       314 ~~s~~~i~~~~~  325 (332)
                      ++|++.|++.++
T Consensus       316 ~~s~~~l~~~~~  327 (331)
T 4aj2_A          316 KKSADTLWGIQK  327 (331)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHh
Confidence            999999998443

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=100.00  E-value=8.9e-67  Score=482.29  Aligned_cols=305  Identities=23%  Similarity=0.369  Sum_probs=266.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~~~al~~aDi   84 (332)
                      |||+||| +|.||+++++.|+..++++     +++|+|+++  ++++|.++||+|+.++...+..+. ++.+++++|||+
T Consensus         1 Mkv~ViG-aG~vG~~~a~~l~~~~~~~-----el~l~D~~~--~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDv   72 (314)
T 3nep_X            1 MKVTVIG-AGNVGATVAECVARQDVAK-----EVVMVDIKD--GMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDV   72 (314)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSS-----EEEEECSST--THHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCC-----EEEEEeCch--HHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCE
Confidence            5999999 5999999999999988765     899999985  678999999999875433333332 367899999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEe-chHHHHH
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLDHNR  163 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds~r  163 (332)
                      ||+++|.+++||++|.|++.+|+++++++++.|.++| |+++++++|||+|++|++++++ +|+|++|+.|. |.||+.|
T Consensus        73 Vii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvd~~t~~~~k~-~g~p~~rviG~~t~LD~~R  150 (314)
T 3nep_X           73 CIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVVANPLDVMTYVAYEA-SGFPTNRVMGMAGVLDTGR  150 (314)
T ss_dssp             EEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEECCSSHHHHHHHHHHH-HTCCGGGEEECCHHHHHHH
T ss_pred             EEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEecCCchhHHHHHHHHh-cCCChHHEEeecCchHHHH
Confidence            9999999999999999999999999999999999998 6899999999999999999998 79999997665 5999999


Q ss_pred             HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccc
Q 020022          164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS  243 (332)
Q Consensus       164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~  243 (332)
                      +++++|+++|++|++|+++ ||||||+++||+||++++    +|.|+.+++.++.|  +++.+++++++++|++.||.++
T Consensus       151 ~~~~la~~lgv~~~~v~~~-ViG~Hg~t~vp~~S~~~v----~g~p~~~~~~~~~~--~~i~~~v~~~g~eIi~~kg~sa  223 (314)
T 3nep_X          151 FRSFIAEELDVSVRDVQAL-LMGGHGDTMVPLPRYTTV----GGIPVPQLIDDARI--EEIVERTKGAGGEIVDLMGTSA  223 (314)
T ss_dssp             HHHHHHHHHTCCGGGEEEE-EEESSGGGEEEEEEEEEE----TTEEGGGTSCHHHH--HHHHHHHHTHHHHHHHHHSSCC
T ss_pred             HHHHHHHHhCcCHHHeEEE-EECCCCCcEEeeeecCeE----CcEehhhccCHHHH--HHHHHHHHHhHHHHHhccCCcH
Confidence            9999999999999999988 589999999999999999    99999988754433  7899999999999999988655


Q ss_pred             hHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHH
Q 020022          244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSE  322 (332)
Q Consensus       244 ~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~  322 (332)
                      ++++|.++++++. |+++| +++++|+|++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|++.|++
T Consensus       224 ~~a~a~a~~~~~~-ail~~-~~~v~~~s~~~~g~yg~-~~~~~s~P~~lg~~Gv~~v~~-l~L~~~E~~~l~~s~~~l~~  299 (314)
T 3nep_X          224 WYAPGAAAAEMTE-AILKD-NKRILPCAAYCDGEYGL-DDLFIGVPVKLGAGGVEEVIE-VDLDADEKAQLKTSAGHVHS  299 (314)
T ss_dssp             CHHHHHHHHHHHH-HHHHT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-HHHcC-CCeEEEEEEEeccccCC-CceEEEEEEEEeCCEEEEecC-CCCCHHHHHHHHHHHHHHHH
Confidence            5677778888665 56667 89999999999999999 79999999987 999999998 89999999999999999999


Q ss_pred             HHHHHhhhh
Q 020022          323 EKALAYSCL  331 (332)
Q Consensus       323 ~~~~~~~~~  331 (332)
                      .++.+..+|
T Consensus       300 ~~~~~~~~l  308 (314)
T 3nep_X          300 NLDDLQRLR  308 (314)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999988776

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=100.00  E-value=1e-65  Score=480.62  Aligned_cols=326  Identities=53%  Similarity=0.855  Sum_probs=292.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC--CchhhhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~--~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      |+++++||+||||+|+||++++..|+..++++..+..+|+|+|++  +.++++++.++||.|...+...++..+++.+++
T Consensus         1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a   80 (329)
T 1b8p_A            1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA   80 (329)
T ss_dssp             --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence            766789999999779999999999998887654444589999997  113667889999999654555677888889999


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEech
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR  158 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~  158 (332)
                      ++|||+||++||.+++++++|.+++.+|+++++++++.++++|.|++++|++|||+|++|++++++++|+|++|++++|.
T Consensus        81 l~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~  160 (329)
T 1b8p_A           81 FKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLR  160 (329)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCH
T ss_pred             hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEeec
Confidence            99999999999999999999999999999999999999999973579999999999999999999855999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHh
Q 020022          159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA  238 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~  238 (332)
                      ||+.|+++++|+++|+++++|++++|||+||++++|+||++++    +|.|+.+++.++.|..+++.+++++++++|++.
T Consensus       161 Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg~s~~p~~s~~~v----~g~~~~~~~~~~~~~~~~i~~~v~~~g~eii~~  236 (329)
T 1b8p_A          161 LDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQI----DGASVKDMINDDAWNRDTFLPTVGKRGAAIIDA  236 (329)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEESCEEEBCSSTTCEEECSSCEE----TTEEHHHHHCCHHHHHHTHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCHHHceEEEEEeccCCcEeeehHHCeE----CCeeHHHHhccchhhHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999776799999999999999999    999999887655676679999999999999999


Q ss_pred             cCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEecCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          239 RKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       239 kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      ||+++++++|.++++++.+++.++ +++++|+|++++|+||+|+|+|||+||++++|+++++++++|+++|+++|++|++
T Consensus       237 kg~~~~~~~a~a~~~~~~ai~~~~-~~~~~~~s~~~~g~yg~~~~~~~s~P~~i~~Gv~~i~~~~~l~~~e~~~l~~s~~  315 (329)
T 1b8p_A          237 RGVSSAASAANAAIDHIHDWVLGT-AGKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQGLSIDAFSQERINVTLN  315 (329)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHCC-TTCCEEEEEECCSGGGCCTTCEEEEEEEEETTEEEECCCCCCCHHHHHHHHHHHH
T ss_pred             cCCChHHHHHHHHHHHHHHHhcCC-CCcEEEEEEEecCccCCCCCeEEEEEEEEcCCEEEecCCCCCCHHHHHHHHHHHH
Confidence            998888877778899988877765 7899999999999999999999999998899999998658999999999999999


Q ss_pred             HHHHHHHHHhhhh
Q 020022          319 ELSEEKALAYSCL  331 (332)
Q Consensus       319 ~i~~~~~~~~~~~  331 (332)
                      .|+++++.+.++|
T Consensus       316 ~l~~~~~~~~~~~  328 (329)
T 1b8p_A          316 ELLEEQNGVQHLL  328 (329)
T ss_dssp             HHHHHHHHHGGGG
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999999886

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=100.00  E-value=6.1e-65  Score=464.90  Aligned_cols=287  Identities=22%  Similarity=0.300  Sum_probs=253.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~~~~~al~~aD   83 (332)
                      |||+||| +|+||+++++.|+..++++     ||+|+|++  +++++|+++||+|+.....  ..+..+ +++++++|||
T Consensus         1 MKV~IiG-aG~VG~~~a~~l~~~~~~~-----el~L~Di~--~~~~~G~a~DL~h~~~~~~~~~~i~~~-~d~~~~~~aD   71 (294)
T 2x0j_A            1 MKLGFVG-AGRVGSTSAFTCLLNLDVD-----EIALVDIA--EDLAVGEAMDLAHAAAGIDKYPKIVGG-ADYSLLKGSE   71 (294)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHSCCS-----EEEEECSS--HHHHHHHHHHHHHHHGGGTCCCEEEEE-SCGGGGTTCS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCC-----EEEEEeCC--CCcchhhhhhhhcccccCCCCCeEecC-CCHHHhCCCC
Confidence            6999999 5999999999999998877     99999998  4788999999999875433  334444 4678999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~  162 (332)
                      +||++||.||+||++|+|++..|+++++++++.|.++| |+++++++|||+|++|+++++. +|+|++| |+++|.||++
T Consensus        72 vVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~-p~aivlvvsNPvd~~t~i~~k~-sg~p~~rvig~gT~LDs~  149 (294)
T 2x0j_A           72 IIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMDVMTYIMWKE-SGKPRNEVFGMGNQLDSQ  149 (294)
T ss_dssp             EEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHHHHHHHHHHH-SSCCTTSEEECCHHHHHH
T ss_pred             EEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcC-CceEEEEecCcchhhHHhhHHH-cCCChhhEEEeeeEEeHH
Confidence            99999999999999999999999999999999999999 5799999999999999999999 6998887 7888999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS  242 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~  242 (332)
                      ||+++++++++.++.  +++ |||+||+++||+||++++    +|.+.          .+++.+++++++++|+++||++
T Consensus       150 R~~~~l~~~~~~~~~--~~~-V~G~HGdt~vp~~S~~~v----~g~~~----------~~~i~~~~~~~g~eIi~~kGst  212 (294)
T 2x0j_A          150 RLKERLYNAGARNIR--RAW-IIGEHGDSMFVAKSLADF----DGEVD----------WEAVENDVRFVAAEVIKRKGAT  212 (294)
T ss_dssp             HHHHHHHHTTCEEEC--CCC-EEBCSSTTCEECGGGCCE----ESCCC----------HHHHHHHHHTHHHHHHHHHSSC
T ss_pred             HHHHHHhhcccCCcc--eeE-EEecCCCcEEEeeeccCC----CCchh----------HHHHHHHHhhhheEEEecCccc
Confidence            999999999987654  445 699999999999999999    66542          2577888999999999999976


Q ss_pred             chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHH
Q 020022          243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELS  321 (332)
Q Consensus       243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  321 (332)
                      .+ ++|.++++++. ++.+| +++++|+|++++|+||+ +|+|||+||++ ++|+ ++++ ++|+++|+++|++|++.|+
T Consensus       213 ~~-a~a~a~~~~~~-ail~d-~~~v~~~s~~l~g~yG~-~~v~~s~P~~lg~~Gv-ei~~-l~L~~~E~~~l~~s~~~lk  286 (294)
T 2x0j_A          213 IF-GPAVAIYRMVK-AVVED-TGEIIPTSMILQGEYGI-ENVAVGVPAKLGKNGA-EVAD-IKLSDEEIEKLRNSAKILR  286 (294)
T ss_dssp             CH-HHHHHHHHHHH-HHHTT-CCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEE-EECC-CCCCHHHHHHHHHHHHHHH
T ss_pred             ch-hHHHHHHHHHH-HHHcC-CCcEEEEEEEEecCCCC-ccEEEEEEEEEeCCEE-EEeC-CCCCHHHHHHHHHHHHHHH
Confidence            65 55668888765 47777 89999999999999999 79999999986 9998 4787 9999999999999999999


Q ss_pred             HHHHH
Q 020022          322 EEKAL  326 (332)
Q Consensus       322 ~~~~~  326 (332)
                      +.++.
T Consensus       287 ~~i~~  291 (294)
T 2x0j_A          287 ERLEE  291 (294)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            98874

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=100.00  E-value=1.9e-65  Score=478.03  Aligned_cols=304  Identities=26%  Similarity=0.380  Sum_probs=264.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +++||+||||+|+||+++++.++..++.+     +|+|+|++  +++++|.++||+|+.++ ..++..+++.+++++|||
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~-----evvLiDi~--~~k~~g~a~DL~~~~~~-~~~i~~t~d~~~al~dAD   78 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTP-----NLCLYDPF--AVGLEGVAEEIRHCGFE-GLNLTFTSDIKEALTDAK   78 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCS-----CEEEECSC--HHHHHHHHHHHHHHCCT-TCCCEEESCHHHHHTTEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCC-----EEEEEeCC--chhHHHHHHhhhhCcCC-CCceEEcCCHHHHhCCCC
Confidence            56799999966999999999999887654     79999997  47889999999998643 246777888899999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeE-EEEecCcccchHHHHHHhCCCCCCCcEEEechHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK-VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~-viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~  162 (332)
                      +||+++|.|+++|++|.|++.+|+++++++++.|.++| |+++ ++++|||+|++|++++++ +|+|++|++++|.||++
T Consensus        79 vVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsNPvd~~t~i~~k~-sg~p~~rv~g~t~LDs~  156 (343)
T 3fi9_A           79 YIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFNPADITGLVTLIY-SGLKPSQVTTLAGLDST  156 (343)
T ss_dssp             EEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSSSHHHHHHHHHHH-HTCCGGGEEEECCHHHH
T ss_pred             EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecCchHHHHHHHHHH-cCCCcceEEEecCcHHH
Confidence            99999999999999999999999999999999999999 6786 899999999999999998 58999998899999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhh-----hcccchhHHHHHHHhhHHHHHH
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK-----DDAWLNGEFITTVQQRGAAIIK  237 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~-----~~~~~~~~~~~~v~~~~~~i~~  237 (332)
                      ||++++|+++|++|++|+..+||||||+++||+||+++|    +|.|+.+++.     ++.|  +++.+++++++++|++
T Consensus       157 R~~~~la~~l~v~~~~v~~~~ViGeHgds~vp~~S~a~v----~G~pl~~~~~~~~~~~~~~--~~i~~~v~~~g~eIi~  230 (343)
T 3fi9_A          157 RLQSELAKHFGIKQSLVTNTRTYGGHGEQMAVFASTAKV----NGTPLTDLIGTDKLTNEQW--AELKQRVVKGGANIIK  230 (343)
T ss_dssp             HHHHHHHHHHTSCGGGEECCCEEESSGGGEEECGGGCEE----TTEEGGGTTTBTTBCHHHH--HHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHHhCcCHHHcccceEEEcCCCceeeeeecceE----CCEEhhHhccccCCCHHHH--HHHHHHHHhhhHHHHH
Confidence            999999999999999998444699999999999999999    9999998853     2345  5899999999999999


Q ss_pred             hcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCC--CCHHHHHHHH
Q 020022          238 ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLS--IDEFSRKKLD  314 (332)
Q Consensus       238 ~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~--l~~~E~~~l~  314 (332)
                      .||+|+++++|.++++++.+ |.+| ++.++|+|++++|+| . +|+|||+||++ ++|++.+ . ++  |+++|+++|+
T Consensus       231 ~kg~ss~~s~A~a~~~~~~a-il~d-~~~v~~~s~~~~g~~-~-~~v~~s~P~~lg~~Gv~~~-~-~~~ll~~~E~~~l~  304 (343)
T 3fi9_A          231 LRGRSSFQSPSYVSIEMIRA-AMGG-EAFRWPAGCYVNVPG-F-EHIMMAMETTITKDGVKHS-D-INQLGNEAERAALK  304 (343)
T ss_dssp             HHSSCCCHHHHHHHHHHHHH-HTTS-SCCCSCEEEEEEETT-E-EEEEEEESEEEETTEEEEC-C-GGGSSCHHHHHHHH
T ss_pred             ccCCCcHHhHHHHHHHHHHH-HHhC-CCceEEEEEEEeCCC-c-CceEEEeEEEEeCCceEEE-e-cCCCCCHHHHHHHH
Confidence            99999898888889998776 5666 788999999999864 3 79999999986 9999876 3 44  8999999999


Q ss_pred             HHHHHHHHHHHHHhh
Q 020022          315 LTAEELSEEKALAYS  329 (332)
Q Consensus       315 ~s~~~i~~~~~~~~~  329 (332)
                      +|++.|++.++.+..
T Consensus       305 ~Sa~~l~~~~~~~~~  319 (343)
T 3fi9_A          305 ESYSHLAKLRDEVIA  319 (343)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988765

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=100.00  E-value=2e-64  Score=467.03  Aligned_cols=304  Identities=22%  Similarity=0.374  Sum_probs=269.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~a   78 (332)
                      |+|+.+||+|+| +|.+|+++++.|+..++ +     +++|+|+++.+++++|.++|+.|...  ....+++.+++ +++
T Consensus         4 m~~~~~kv~ViG-aG~vG~~ia~~l~~~g~-~-----~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a   75 (315)
T 3tl2_A            4 MTIKRKKVSVIG-AGFTGATTAFLLAQKEL-A-----DVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YAD   75 (315)
T ss_dssp             CCCCCCEEEEEC-CSHHHHHHHHHHHHTTC-C-----EEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGG
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHhCCC-C-----eEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHH
Confidence            767778999999 59999999999998876 5     89999998434678999999999752  12345555554 789


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE-ec
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC-LT  157 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t  157 (332)
                      +++||+||+++|.|++||++|.|++.+|+++++++++.+.++| |+++++++|||+|++|++++++ +|+|++|++| ||
T Consensus        76 ~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vlvvsNPvd~~t~~~~k~-sg~p~~rviG~gt  153 (315)
T 3tl2_A           76 TADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHS-PNAIIVVLTNPVDAMTYSVFKE-AGFPKERVIGQSG  153 (315)
T ss_dssp             GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEECCH
T ss_pred             hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEECCChHHHHHHHHHHh-cCCChHHEEeecc
Confidence            9999999999999999999999999999999999999999999 6899999999999999999998 7999999645 59


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH
Q 020022          158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK  237 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~  237 (332)
                      .||+.|+++++|+++|++|++|++++ |||||+++||+||+++|    +|.|+.+++.++.+  +++.+++++++++|++
T Consensus       154 ~LD~~R~~~~la~~lgv~~~~v~~~v-iG~Hg~t~vp~~S~~~v----~g~p~~~~~~~~~~--~~i~~~v~~~g~eii~  226 (315)
T 3tl2_A          154 VLDTARFRTFIAQELNLSVKDITGFV-LGGHGDDMVPLVRYSYA----GGIPLETLIPKERL--EAIVERTRKGGGEIVG  226 (315)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEECCE-EBCSGGGCEECGGGCEE----TTEEGGGTSCHHHH--HHHHHHHHTHHHHHHH
T ss_pred             CcHHHHHHHHHHHHhCcCHHHceeeE-ecCCCCcceeecccCeE----CCEEHHHhCCHHHH--HHHHHHHHHHHHHHHH
Confidence            99999999999999999999999885 89999999999999999    99999988755433  6999999999999999


Q ss_pred             --hcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          238 --ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       238 --~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                        +||++. +++|.++++++.+ |++| +++++|+|++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|+
T Consensus       227 ~~~kgst~-~a~a~a~~~~~~a-il~~-~~~v~~~s~~~~g~yg~-~~~~~s~P~~~g~~Gv~~v~~-l~L~~~E~~~l~  301 (315)
T 3tl2_A          227 LLGNGSAY-YAPAASLVEMTEA-ILKD-QRRVLPAIAYLEGEYGY-SDLYLGVPVILGGNGIEKIIE-LELLADEKEALD  301 (315)
T ss_dssp             HHSSSCCC-HHHHHHHHHHHHH-HHTT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHH
T ss_pred             hcCCCcch-HHHHHHHHHHHHH-HHcC-CCcEEEEEEeccCccCC-CceEEEEEEEEeCCEEEEEcC-CCCCHHHHHHHH
Confidence              777655 4556788897765 6667 89999999999999999 79999999987 999999997 999999999999


Q ss_pred             HHHHHHHHHHHH
Q 020022          315 LTAEELSEEKAL  326 (332)
Q Consensus       315 ~s~~~i~~~~~~  326 (332)
                      +|++.|++.++.
T Consensus       302 ~s~~~l~~~~~~  313 (315)
T 3tl2_A          302 RSVESVRNVMKV  313 (315)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHH
Confidence            999999998764

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=100.00  E-value=4.4e-64  Score=466.27  Aligned_cols=307  Identities=21%  Similarity=0.368  Sum_probs=269.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--ccceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--LKGVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--~~~~~~~~~~~~al~~   81 (332)
                      +++||+||| +|.||+++++.|+..++ .     +|+|+|+++  +++++.++||+|...+.  ..++..++ .+++++|
T Consensus         4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~-~-----~v~l~Di~~--~~~~g~a~dL~~~~~~~~~~~~v~~t~-d~~a~~~   73 (321)
T 3p7m_A            4 ARKKITLVG-AGNIGGTLAHLALIKQL-G-----DVVLFDIAQ--GMPNGKALDLLQTCPIEGVDFKVRGTN-DYKDLEN   73 (321)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTC-C-----EEEEECSSS--SHHHHHHHHHHTTHHHHTCCCCEEEES-CGGGGTT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCC-c-----eEEEEeCCh--HHHHHHHHHHHhhhhhcCCCcEEEEcC-CHHHHCC
Confidence            567999999 69999999999998764 2     799999985  67889999999976432  33455444 4789999


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEe-chHH
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLD  160 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~ld  160 (332)
                      ||+||+++|.|+++|++|.|++.+|+++++++++.|.++| |++++|++|||+|++|++++++ +++|++|+.|. |.||
T Consensus        74 aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvd~~t~~~~k~-sg~p~~rviG~~~~LD  151 (321)
T 3p7m_A           74 SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNPLDIMVNMLQKF-SGVPDNKIVGMAGVLD  151 (321)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEEECHHHH
T ss_pred             CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCchHHHHHHHHHh-cCCCHHHEEeeccchH
Confidence            9999999999999999999999999999999999999999 6899999999999999999998 79999996554 5999


Q ss_pred             HHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc----hhHHHHHHHhhHHHHH
Q 020022          161 HNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL----NGEFITTVQQRGAAII  236 (332)
Q Consensus       161 s~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~----~~~~~~~v~~~~~~i~  236 (332)
                      +.|+++++|+++|++|++|+++ ||||||+++||+||++++    +|.|+.++++ +.|.    .+++.+++++++++|+
T Consensus       152 ~~R~~~~la~~l~v~~~~v~~~-v~G~HG~t~~p~~s~~~v----~g~p~~~~~~-~~~~~~~~~~~i~~~v~~~g~eIi  225 (321)
T 3p7m_A          152 SARFRTFLADELNVSVQQVQAY-VMGGHGDTMVPLTKMSNV----AGVSLEQLVK-EGKLKQERLDAIVSRTRSGGGEIV  225 (321)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECC-EEECSGGGEEECTTTCEE----TTEEHHHHHH-TTSSCHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHhCcCHHHceEe-eecCcCCceeeeeeeceE----CCEehhhhcc-ccCCCHHHHHHHHHHHHhhhHHHH
Confidence            9999999999999999999988 489999999999999999    9999998873 2342    2468889999999999


Q ss_pred             HhcCc-cchHHHHHHHHHHHHHHHcCCCCceEEEeeeecC-CCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          237 KARKL-SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSD-GSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       237 ~~kg~-~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~-g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                      +.||. ++++++|.++++++.+ |++| +++++|+|++++ |+||+|+|+|||+||++ ++|++++ + ++|+++|+++|
T Consensus       226 ~~~g~gsa~~~~a~a~~~~~~a-il~~-~~~v~~~s~~~~~g~ygi~~~v~~s~P~~~g~~Gv~~v-~-l~L~~~E~~~l  301 (321)
T 3p7m_A          226 ALLKTGSAYYAPAAAGIQMAES-FLKD-KKMILPCAAKVKAGMYGLDEDLFVGVPTEISANGVRPI-E-VEISDKEREQL  301 (321)
T ss_dssp             HHHSSSCCCHHHHHHHHHHHHH-HHTT-CCEEEEEEEEECTTGGGCSSCEEEEEEEEEETTEEEEC-C-CCCCHHHHHHH
T ss_pred             HhcCCCChHHHHHHHHHHHHHH-HHcC-CCcEEEEEEEccCcccCCCCCeEEEEEEEEcCCEEEEe-C-CCCCHHHHHHH
Confidence            96543 4456777889998876 5556 899999999999 99999889999999987 9999999 7 99999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhC
Q 020022          314 DLTAEELSEEKALAYSCLS  332 (332)
Q Consensus       314 ~~s~~~i~~~~~~~~~~~~  332 (332)
                      ++|++.|++.++.+...|+
T Consensus       302 ~~s~~~l~~~~~~~~~~l~  320 (321)
T 3p7m_A          302 QVSINAIKDLNKAAAEILA  320 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            9999999999999887764

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=100.00  E-value=1.4e-63  Score=457.25  Aligned_cols=287  Identities=22%  Similarity=0.310  Sum_probs=257.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~~al~~aD   83 (332)
                      |||+|+|| |.+|+++++.|+..++.+     +|+|+|+++  +++++.++|++|....  ...+++.+++ +++++|||
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~-----~v~L~D~~~--~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aD   71 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVD-----EIALVDIAE--DLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCS-----EEEEECSSH--HHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-----eEEEEECCh--HHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCC
Confidence            59999995 999999999999988765     899999984  6788999999998743  3345666666 89999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~  162 (332)
                      +||+++|.++++|++|.|++.+|+++++++++.|.++| |+++++++|||+|++|++++++ +|+|++|+ +.+|.||++
T Consensus        72 iVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvsNPvd~~t~~~~k~-~g~p~~rviG~gt~LD~~  149 (294)
T 1oju_A           72 IIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMDVMTYIMWKE-SGKPRNEVFGMGNQLDSQ  149 (294)
T ss_dssp             EEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHHHHHHHHHHH-SCCCTTSEEECSHHHHHH
T ss_pred             EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcchHHHHHHHHh-cCCCHHHEeecccccHHH
Confidence            99999999999999999999999999999999999998 6899999999999999999998 79999995 555899999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS  242 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~  242 (332)
                      |+++++| ++|++|++ +.+ ||||||+++||+||++++    +|.|          ..+++.+++++++++|++.||++
T Consensus       150 R~~~~la-~l~v~~~~-~~~-V~G~Hg~t~vp~~s~~~v----~g~~----------~~~~~~~~v~~~g~eii~~kG~t  212 (294)
T 1oju_A          150 RLKERLY-NAGARNIR-RAW-IIGEHGDSMFVAKSLADF----DGEV----------DWEAVENDVRFVAAEVIKRKGAT  212 (294)
T ss_dssp             HHHHHHH-HTTCBSCC-CCC-EEBCSSTTCEECGGGCCC----BSCC----------CHHHHHHHHHTTHHHHHHHHSSC
T ss_pred             HHHHHHH-HhCCCccC-ceE-EEecCCCceeeecccceE----CCcC----------hHHHHHHHHHHHHHHHHHhcCCc
Confidence            9999999 99999999 866 599999999999999999    8877          13689999999999999999966


Q ss_pred             chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHH
Q 020022          243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELS  321 (332)
Q Consensus       243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~  321 (332)
                      + +++|.++++++.+ |++| +++++|+|++++|+||++ |+|||+||++ ++|++ +++ ++|+++|+++|++|+++|+
T Consensus       213 ~-~~~a~a~~~~~~a-il~~-~~~v~~~s~~~~g~yg~~-~~~~s~P~~~g~~Gv~-v~~-l~L~~~E~~~l~~s~~~l~  286 (294)
T 1oju_A          213 I-FGPAVAIYRMVKA-VVED-TGEIIPTSMILQGEYGIE-NVAVGVPAKLGKNGAE-VAD-IKLSDEEIEKLRNSAKILR  286 (294)
T ss_dssp             C-HHHHHHHHHHHHH-HHTT-CCCEEEEEEEEESGGGCE-EEEEEEEEEEETTEEE-ECC-CCCCHHHHHHHHHHHHHHH
T ss_pred             c-hHHHHHHHHHHHH-HHcC-CCeEEEEEecccccCCCC-ceEEEEEEEEeCCEEE-Eec-CCCCHHHHHHHHHHHHHHH
Confidence            5 4567788887765 6667 899999999999999995 9999999987 99999 887 9999999999999999999


Q ss_pred             HHHHH
Q 020022          322 EEKAL  326 (332)
Q Consensus       322 ~~~~~  326 (332)
                      +.++.
T Consensus       287 ~~~~~  291 (294)
T 1oju_A          287 ERLEE  291 (294)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            98875

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=2e-63  Score=462.04  Aligned_cols=307  Identities=21%  Similarity=0.329  Sum_probs=266.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+|||| |+||+++++.|+..++++     ||+|+|++  ++++++.++|+.|.. ++..+++++.+.+++++|||+
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~-----el~L~Di~--~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~aDv   75 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAE-----EFVIVDVV--KDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKDADL   75 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSS--HHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCC-----EEEEEeCC--chHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCCCCE
Confidence            479999995 999999999999988766     99999997  478999999999986 343566666678999999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHHH
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNR  163 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r  163 (332)
                      ||+++|.++++|++|+|++.+|+++++++++.|+++| |++++|++|||+|++|++++++ +++|++|+ |.||.||+.|
T Consensus        76 Vii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv~~~t~~~~k~-s~~p~~rviG~gt~LD~~R  153 (318)
T 1ez4_A           76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVAANPVDILTYATWKF-SGFPKERVIGSGTSLDSSR  153 (318)
T ss_dssp             EEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHHH
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCcHHHHHHHHHHH-cCCCHHHEEeccccchHHH
Confidence            9999999999999999999999999999999999998 6899999999999999999998 69999996 5569999999


Q ss_pred             HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc---hhHHHHHHHhhHHHHHHhcC
Q 020022          164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL---NGEFITTVQQRGAAIIKARK  240 (332)
Q Consensus       164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~---~~~~~~~v~~~~~~i~~~kg  240 (332)
                      +++++|+++|++|++|+.+ ||||||++++|+||++++    +|.|+.+++.+..|.   .+++.+++++++++++++||
T Consensus       154 ~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg  228 (318)
T 1ez4_A          154 LRVALGKQFNVDPRSVDAY-IMGEHGDSEFAAYSTATI----GTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIINLKG  228 (318)
T ss_dssp             HHHHHHHHHTCCGGGEECC-EESSSSSSCEECGGGCEE----TTEEHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhCcChhHEEEE-EecccCCceEEEehhhcC----CCeeHHHHhhccCCCHHHHHHHHHHHHHhhhhheeCCC
Confidence            9999999999999999966 599999999999999999    999999887543453   35788899999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHH
Q 020022          241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEE  319 (332)
Q Consensus       241 ~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  319 (332)
                      ++++. .|.++++++.+ |.+| ++.++|+|++++|+||+| |+|+|+||++ ++|++++++ ++|+++|+++|++|++.
T Consensus       229 ~t~~~-~a~a~~~~~~a-i~~~-~~~~~~vs~~~~G~yg~~-~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~  303 (318)
T 1ez4_A          229 ATFYG-IGTALMRISKA-ILRD-ENAVLPVGAYMDGQYGLN-DIYIGTPAIIGGTGLKQIIE-SPLSADELKKMQDSAAT  303 (318)
T ss_dssp             CCCHH-HHHHHHHHHHH-HHTT-CCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHH
T ss_pred             cchHH-HHHHHHHHHHH-HHhC-CCcEEEEEEeecCccCCC-ceEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHHH
Confidence            76654 55789998776 5566 899999999999999997 9999999997 999999998 89999999999999999


Q ss_pred             HHHHHHHHhhhhC
Q 020022          320 LSEEKALAYSCLS  332 (332)
Q Consensus       320 i~~~~~~~~~~~~  332 (332)
                      |++.++.+.++|+
T Consensus       304 l~~~~~~~~~~~~  316 (318)
T 1ez4_A          304 LKKVLNDGLAELE  316 (318)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998874

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=100.00  E-value=2.6e-63  Score=461.06  Aligned_cols=305  Identities=23%  Similarity=0.387  Sum_probs=262.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChhhhcC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACT   80 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~~al~   80 (332)
                      |+++||+||| +|.+|+++++.|+..++ .     +|+|+|+++  +++++.++|++|...+  ...++..+++ +++++
T Consensus         5 m~~~kI~viG-aG~vG~~~a~~l~~~~~-~-----~v~L~Di~~--~~~~g~~~dl~~~~~~~~~~~~v~~t~d-~~a~~   74 (324)
T 3gvi_A            5 MARNKIALIG-SGMIGGTLAHLAGLKEL-G-----DVVLFDIAE--GTPQGKGLDIAESSPVDGFDAKFTGAND-YAAIE   74 (324)
T ss_dssp             -CCCEEEEEC-CSHHHHHHHHHHHHTTC-C-----EEEEECSSS--SHHHHHHHHHHHHHHHHTCCCCEEEESS-GGGGT
T ss_pred             CcCCEEEEEC-CCHHHHHHHHHHHhCCC-C-----eEEEEeCCc--hhHHHHHHHHhchhhhcCCCCEEEEeCC-HHHHC
Confidence            3567999999 59999999999998765 2     799999985  6788999999998642  2345655555 59999


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEec-hH
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLT-RL  159 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t-~l  159 (332)
                      |||+||+++|.|+++|++|.|++.+|+++++++++.|.++| |++++|++|||+|++|++++++ +++|++|+.|.| .|
T Consensus        75 ~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNPvd~~t~~~~k~-sg~p~~rviG~~~~L  152 (324)
T 3gvi_A           75 GADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNPLDAMVWALQKF-SGLPAHKVVGMAGVL  152 (324)
T ss_dssp             TCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEECCHHH
T ss_pred             CCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCCcHHHHHHHHHh-cCCCHHHEEeecCcc
Confidence            99999999999999999999999999999999999999999 6899999999999999999998 799999976665 89


Q ss_pred             HHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc----hhHHHHHHHhhHHHH
Q 020022          160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL----NGEFITTVQQRGAAI  235 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~----~~~~~~~v~~~~~~i  235 (332)
                      |+.|+++++|+++|+++++|+++ ||||||+++||+||++++    +|.|+.++++. .|.    .+++.+++++++++|
T Consensus       153 D~~R~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~s~~~v----~g~p~~~~~~~-~~~~~~~~~~i~~~v~~~g~eI  226 (324)
T 3gvi_A          153 DSARFRYFLSEEFNVSVEDVTVF-VLGGHGDSMVPLARYSTV----AGIPLPDLVKM-GWTSQDKLDKIIQRTRDGGAEI  226 (324)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEECC-EEECSGGGEEECGGGCEE----TTEEHHHHHHT-TSSCHHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHhCcCHHHCeEE-EEcCCCCceeeehhhCeE----CCEEHHHhhhc-cCCCHHHHHHHHHHHHHhHHHH
Confidence            99999999999999999999987 589999999999999999    99999988732 332    246888999999999


Q ss_pred             HHhcCc-cchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          236 IKARKL-SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       236 ~~~kg~-~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                      ++.||. ++++++|.++++++.+ |++| +++++|+|++++|+||++ |+|||+||++ ++|++++++ ++|+++|+++|
T Consensus       227 i~~~gkgsa~~~~a~a~~~~~~a-il~~-~~~v~~~s~~~~g~yg~~-~v~~s~P~~~g~~Gv~~v~~-l~L~~~E~~~l  302 (324)
T 3gvi_A          227 VGLLKTGSAFYAPAASAIQMAES-YLKD-KKRVLPVAAQLSGQYGVK-DMYVGVPTVIGANGVERIIE-IDLDKDEKAQF  302 (324)
T ss_dssp             HHHHSSCCCCHHHHHHHHHHHHH-HHTT-CCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHH
T ss_pred             HHhcCCCcHHHHHHHHHHHHHHH-HHcC-CCcEEEEEEEecCccCCC-ceEEEEEEEEeCCEEEEecC-CCCCHHHHHHH
Confidence            996542 4446677788997765 6666 899999999999999994 9999999987 999999998 99999999999


Q ss_pred             HHHHHHHHHHHHHHhh
Q 020022          314 DLTAEELSEEKALAYS  329 (332)
Q Consensus       314 ~~s~~~i~~~~~~~~~  329 (332)
                      ++|++.|++.++.+..
T Consensus       303 ~~s~~~l~~~~~~~~~  318 (324)
T 3gvi_A          303 DKSVASVAGLCEACIG  318 (324)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999988765

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=100.00  E-value=6.5e-63  Score=459.87  Aligned_cols=308  Identities=22%  Similarity=0.338  Sum_probs=268.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.+||+|||| |+||+++++.|+..++++     ||+|+|++  ++++++.++||.|.. ++..++.++.+.+++++|||
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~-----el~L~Di~--~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~aD   78 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQ-----EIGIVDIF--KDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKDAD   78 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCS-----EEEEECSC--HHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGGCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCC-----EEEEEeCC--chHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCCCC
Confidence            4589999995 999999999999988765     89999997  478899999999976 34456666667899999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~  162 (332)
                      +||+++|.++++|++|++++.+|+++++++++.|+++| |++++|++|||+|++|++++++ +++|++|+ |.||.||+.
T Consensus        79 vVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv~~~t~~~~k~-s~~p~~rviG~gt~LD~~  156 (326)
T 2zqz_A           79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPVDILTYATWKL-SGFPKNRVVGSGTSLDTA  156 (326)
T ss_dssp             EEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHH
T ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHH-cCCCHHHEEEccccchHH
Confidence            99999999999999999999999999999999999999 6899999999999999999998 69999996 556999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhh-hcccc---hhHHHHHHHhhHHHHHHh
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK-DDAWL---NGEFITTVQQRGAAIIKA  238 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~-~~~~~---~~~~~~~v~~~~~~i~~~  238 (332)
                      |+++++|+++|++|++|+.+ ||||||++++|+||++++    +|.|+.+++. +..|.   .+++.+++++++++++++
T Consensus       157 R~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~s~~~v----~g~~~~e~~~~~~~~~~~~~~~i~~~v~~~g~eii~~  231 (326)
T 2zqz_A          157 RFRQSIAEMVNVDARSVHAY-IMGEHGDTEFPVWSHANI----GGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKL  231 (326)
T ss_dssp             HHHHHHHHHHTCCGGGEECC-EEBSSSTTCEECGGGCEE----TTEEHHHHHHHCTTSCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHhCCChhheEEE-EecccCCceEeehhhceE----CCEEHHHhhcccccCCHHHHHHHHHHHHHhHHHHHHc
Confidence            99999999999999999966 599999999999999999    9999998875 33353   358889999999999999


Q ss_pred             cCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHH
Q 020022          239 RKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTA  317 (332)
Q Consensus       239 kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~  317 (332)
                      ||++++. .|.++++++.+ |.+| ++.++|+|++++|+||+| |+|+|+||++ ++|++++++ ++|+++|+++|++|+
T Consensus       232 kG~t~~~-~a~aa~~~~~a-i~~~-~~~~~~vsv~~~G~yg~~-~~~~svP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~  306 (326)
T 2zqz_A          232 KGATFYG-IATALARISKA-ILND-ENAVLPLSVYMDGQYGLN-DIYIGTPAVINRNGIQNILE-IPLTDHEEESMQKSA  306 (326)
T ss_dssp             HSCCCHH-HHHHHHHHHHH-HHTT-CCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHH
T ss_pred             CCCcHHH-HHHHHHHHHHH-HHhC-CCcEEEEEEeccCccCCC-ceEEEEEEEEcCCeeEEEec-CCCCHHHHHHHHHHH
Confidence            9976654 55689998876 5566 899999999999999997 9999999997 999999998 899999999999999


Q ss_pred             HHHHHHHHHHhhhhC
Q 020022          318 EELSEEKALAYSCLS  332 (332)
Q Consensus       318 ~~i~~~~~~~~~~~~  332 (332)
                      +.|++.++.+.++|+
T Consensus       307 ~~l~~~~~~~~~~~~  321 (326)
T 2zqz_A          307 SQLKKVLTDAFAKND  321 (326)
T ss_dssp             HHHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHhhh
Confidence            999999999988874

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=100.00  E-value=9.9e-62  Score=451.06  Aligned_cols=307  Identities=21%  Similarity=0.331  Sum_probs=270.2

Q ss_pred             CC-CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-cceEeeCChhhh
Q 020022            1 MA-KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEA   78 (332)
Q Consensus         1 m~-~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~~~~~~~~~~~a   78 (332)
                      |+ |+++||+|||| |++|++++..|+..++++     +|+|+|++  ++++++.++|++|.. +.. .++.++.+.+++
T Consensus         1 m~~m~~~KI~IIGa-G~vG~~la~~l~~~~~~~-----ei~L~Di~--~~~~~g~~~dl~~~~-~~~~~~~~v~~~~~~a   71 (317)
T 3d0o_A            1 MNKFKGNKVVLIGN-GAVGSSYAFSLVNQSIVD-----ELVIIDLD--TEKVRGDVMDLKHAT-PYSPTTVRVKAGEYSD   71 (317)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHCSCS-----EEEEECSC--HHHHHHHHHHHHHHG-GGSSSCCEEEECCGGG
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEeCC--hhHhhhhhhhHHhhh-hhcCCCeEEEeCCHHH
Confidence            53 46789999995 999999999999887655     89999998  478889999999974 333 455555577999


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEec
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLT  157 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t  157 (332)
                      ++|||+||+++|.++++|++|.+++.+|+++++++++.|.++| |++++|++|||+|++|++++++ +++|++|+ +.||
T Consensus        72 ~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~k~-~~~p~~rviG~gt  149 (317)
T 3d0o_A           72 CHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLVATNPVDILAYATWKF-SGLPKERVIGSGT  149 (317)
T ss_dssp             GTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTT
T ss_pred             hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCcHHHHHHHHHHH-hCCCHHHEEecCc
Confidence            9999999999999999999999999999999999999999998 6899999999999999999998 69999996 5569


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc---hhHHHHHHHhhHHH
Q 020022          158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL---NGEFITTVQQRGAA  234 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~---~~~~~~~v~~~~~~  234 (332)
                      .||+.|+++++|+++|+++++|+.+ ||||||++++|+||++++    +|.|+.+++.+..|.   .+++.+++++++++
T Consensus       150 ~lD~~r~~~~la~~l~v~~~~v~~~-v~G~HG~t~~p~~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~e  224 (317)
T 3d0o_A          150 ILDSARFRLLLSEAFDVAPRSVDAQ-IIGEHGDTELPVWSHANI----AGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYD  224 (317)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGCBCC-EEBCSSTTCEECTTTCEE----TTEEHHHHHHTSTTHHHHHHHHHHHHHTHHHH
T ss_pred             cccHHHHHHHHHHHhCcChhhEEEE-EEecCCCCeeEeeecccc----CCEEHHHHhhccCCCHHHHHHHHHHHHhhhhE
Confidence            9999999999999999999999966 599999999999999999    999999887543452   35788899999999


Q ss_pred             HHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          235 IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       235 i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                      ++++||++++. .|.++++++.+ |.+| +++++|+|++++|+||+| |+|+|+||++ ++|++++++ ++|+++|+++|
T Consensus       225 ii~~kg~~~~~-~a~a~~~~~~a-i~~~-~~~~~~~~~~~~g~~g~~-~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~~~l  299 (317)
T 3d0o_A          225 IIQAKGATYYG-VAMGLARITEA-IFRN-EDAVLTVSALLEGEYEEE-DVYIGVPAVINRNGIRNVVE-IPLNDEEQSKF  299 (317)
T ss_dssp             HHHHHSCCCHH-HHHHHHHHHHH-HHTT-CCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHH
T ss_pred             EEeCCCCchHh-HHHHHHHHHHH-HHcC-CCcEEEEEEeecCccCCC-ceEEEEEEEEeCCeeEEEec-CCCCHHHHHHH
Confidence            99999976664 45689998776 5666 899999999999999997 9999999997 999999998 89999999999


Q ss_pred             HHHHHHHHHHHHHHh
Q 020022          314 DLTAEELSEEKALAY  328 (332)
Q Consensus       314 ~~s~~~i~~~~~~~~  328 (332)
                      ++|++.|++.++.+.
T Consensus       300 ~~s~~~l~~~~~~~~  314 (317)
T 3d0o_A          300 AHSAKTLKDIMAEAE  314 (317)
T ss_dssp             HHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998764

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=100.00  E-value=1e-61  Score=449.31  Aligned_cols=301  Identities=19%  Similarity=0.234  Sum_probs=268.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+|||| |+||+++++.|+..++++     ||+|+|++  ++++++.++||.|... +..++.++.+.+++++|||+|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~-----el~L~Di~--~~k~~g~a~dl~~~~~-~~~~~~v~~~~~~a~~~aD~V   71 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAR-----EVVLVDLD--RKLAQAHAEDILHATP-FAHPVWVWAGSYGDLEGARAV   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCS-----EEEEECSS--HHHHHHHHHHHHTTGG-GSCCCEEEECCGGGGTTEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-----EEEEEeCC--hhHHHHHHHHHHHhHh-hcCCeEEEECCHHHhCCCCEE
Confidence            59999995 999999999999988766     99999998  4788999999999763 334445544568999999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHHHH
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRA  164 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r~  164 (332)
                      |+++|.++++|++|++++.+|+++++++++.|+++| |++++|++|||+|++|++++++ +++|++|+ +.||.||+.|+
T Consensus        72 ii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv~~~t~~~~k~-s~~p~~rviG~gt~LD~~R~  149 (310)
T 2xxj_A           72 VLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAA-PEAVLLVATNPVDVMTQVAYAL-SGLPPGRVVGSGTILDTARF  149 (310)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHH-HTCCGGGEEECTTHHHHHHH
T ss_pred             EECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEecCchHHHHHHHHHH-cCCCHHHEEecCcchhHHHH
Confidence            999999999999999999999999999999999998 6899999999999999999998 69999996 55699999999


Q ss_pred             HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcc--c---chhHHHHHHHhhHHHHHHhc
Q 020022          165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDA--W---LNGEFITTVQQRGAAIIKAR  239 (332)
Q Consensus       165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~--~---~~~~~~~~v~~~~~~i~~~k  239 (332)
                      ++++|+++|++|++|+.+ ||||||++++|+||++++    +|.|+.+++.+..  |   ..+++.++++++++++++.|
T Consensus       150 ~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k  224 (310)
T 2xxj_A          150 RALLAEYLRVAPQSVHAY-VLGEHGDSEVLVWSSAQV----GGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGK  224 (310)
T ss_dssp             HHHHHHHHTSCGGGEEEE-EEBCSSTTCEEEEEEEEE----TTEEHHHHHHHTTCCCCHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHhCcCHHHeEEE-EecccCCccccchhhccC----CCEEHHHHhhhcccCCCHHHHHHHHHHHHHhhHHHHhcc
Confidence            999999999999999985 699999999999999999    9999998765422  4   23578889999999999999


Q ss_pred             CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      |++++. .|.++++++.+ |.+| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       225 g~t~~~-~a~a~~~~~~a-i~~~-~~~~~~vs~~~~G~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~  299 (310)
T 2xxj_A          225 GATYYG-IGAGLARLVRA-ILTD-EKGVYTVSAFTPEVAGV-LEVSLSLPRILGAGGVAGTVY-PSLSPEERAALRRSAE  299 (310)
T ss_dssp             SCCCHH-HHHHHHHHHHH-HHTT-CCEEEEEEEEEEEETTE-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             CCcHHH-HHHHHHHHHHH-HHcC-CCCEEEEEEEEcCccCC-ccEEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHH
Confidence            976654 47789998776 5666 89999999999999999 89999999997 999999998 8999999999999999


Q ss_pred             HHHHHHHHH
Q 020022          319 ELSEEKALA  327 (332)
Q Consensus       319 ~i~~~~~~~  327 (332)
                      .|++.++.+
T Consensus       300 ~l~~~~~~~  308 (310)
T 2xxj_A          300 ILKEAAFAL  308 (310)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999999865

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=100.00  E-value=4.7e-62  Score=451.14  Aligned_cols=302  Identities=21%  Similarity=0.338  Sum_probs=270.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--ccceEeeCChhhhcCCCcE
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--LKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--~~~~~~~~~~~~al~~aDi   84 (332)
                      ||+||| +|+||+++++.|+..++ +     ||+|+|+++  +++++.++|+.|...+.  ..+++.+++ +++++|||+
T Consensus         1 KI~IiG-aG~vG~~~a~~l~~~~l-~-----el~L~Di~~--~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aD~   70 (308)
T 2d4a_B            1 MITILG-AGKVGMATAVMLMMRGY-D-----DLLLIARTP--GKPQGEALDLAHAAAELGVDIRISGSNS-YEDMRGSDI   70 (308)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTC-S-----CEEEECSST--THHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSE
T ss_pred             CEEEEC-cCHHHHHHHHHHHhCCC-C-----EEEEEcCCh--hhHHHHHHHHHHhhhhcCCCeEEEECCC-HHHhCCCCE
Confidence            799999 59999999999998876 5     899999984  77889999999976432  345666555 589999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE-echHHHHH
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC-LTRLDHNR  163 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~lds~r  163 (332)
                      ||+++|.++++|++|++++.+|+++++++++.++++| |++++|++|||+|++|++++++ +++|++|+.| ||.||+.|
T Consensus        71 Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv~~~t~~~~k~-~~~p~~rviG~gt~LD~~R  148 (308)
T 2d4a_B           71 VLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITTNPVDAMTYVMYKK-TGFPRERVIGFSGILDSAR  148 (308)
T ss_dssp             EEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEECCHHHHHHH
T ss_pred             EEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHh-cCCChhhEEEecccchHHH
Confidence            9999999999999999999999999999999999999 6899999999999999999998 7999999655 59999999


Q ss_pred             HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccc
Q 020022          164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS  243 (332)
Q Consensus       164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~  243 (332)
                      +++++|+++|+++++|+.+ ||||||++++|+||++++    +|.|+.+++.++.|  +++.++++++++++++.||.++
T Consensus       149 ~~~~la~~lgv~~~~v~~~-v~G~Hg~t~~p~~s~~~v----~g~~~~~~~~~~~~--~~~~~~v~~~g~eii~~kg~s~  221 (308)
T 2d4a_B          149 MAYYISQKLGVSFKSVNAI-VLGMHGQKMFPVPRLSSV----GGVPLEHLMSKEEI--EEVVSETVNAGAKITELRGYSS  221 (308)
T ss_dssp             HHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEE----TTEEHHHHSCHHHH--HHHHHHHHTHHHHHHHHHSSCC
T ss_pred             HHHHHHHHhCcChhHeEEE-EEeccCCceeeeehhccC----CCEEHHHHcCHHHH--HHHHHHHHHhhHhhhhCCCCcc
Confidence            9999999999999999977 599999999999999999    99999988765554  6899999999999999999445


Q ss_pred             hHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHH
Q 020022          244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSE  322 (332)
Q Consensus       244 ~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~  322 (332)
                      ++++|.++++++.+ |.+| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|++
T Consensus       222 ~~~~a~a~~~~~~a-i~~~-~~~v~~vs~~~~G~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~l~~  297 (308)
T 2d4a_B          222 NYGPAAGLVLTVEA-IKRD-SKRIYPYSLYLQGEYGY-NDIVAEVPAVIGKSGIERIIE-LPLTEDEKRKFDEAVQAVKK  297 (308)
T ss_dssp             CHHHHHHHHHHHHH-HHTT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-HHhC-CCcEEEEEEEEcCccCC-CceEEEEEEEEcCCceEEecC-CCCCHHHHHHHHHHHHHHHH
Confidence            55667789998776 5666 89999999999999999 89999999997 999999998 89999999999999999999


Q ss_pred             HHHHHhhhh
Q 020022          323 EKALAYSCL  331 (332)
Q Consensus       323 ~~~~~~~~~  331 (332)
                      .++.+..+|
T Consensus       298 ~~~~~~~~l  306 (308)
T 2d4a_B          298 LVETLPPQL  306 (308)
T ss_dssp             HHHTSCHHH
T ss_pred             HHHHHHHHh
Confidence            998876655

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=1.9e-61  Score=449.11  Aligned_cols=307  Identities=23%  Similarity=0.328  Sum_probs=259.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      |+++++||+||| +|+||++++..|+..++++     ||+|+|+++  +++++.++|+.|.. ++..+++++.+.+++++
T Consensus         3 m~~~~~KI~IiG-aG~vG~~~a~~l~~~~~~~-----ev~L~Di~~--~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~   73 (318)
T 1y6j_A            3 MVKSRSKVAIIG-AGFVGASAAFTMALRQTAN-----ELVLIDVFK--EKAIGEAMDINHGL-PFMGQMSLYAGDYSDVK   73 (318)
T ss_dssp             ----CCCEEEEC-CSHHHHHHHHHHHHTTCSS-----EEEEECCC-----CCHHHHHHTTSC-CCTTCEEEC--CGGGGT
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHhCCCCC-----EEEEEeCCh--HHHHHHHHHHHHhH-HhcCCeEEEECCHHHhC
Confidence            333568999999 5999999999999988766     899999984  78889999999976 34456666556689999


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechH
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRL  159 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~l  159 (332)
                      |||+||+++|.|+++|++|.|++.+|+++++++++.|.++| |++++|++|||+|++|++++++ +++|++|+ +.||.|
T Consensus        74 ~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~k~-s~~p~~rviG~gt~L  151 (318)
T 1y6j_A           74 DCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVVSNPVDIITYMIQKW-SGLPVGKVIGSGTVL  151 (318)
T ss_dssp             TCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEECSSSHHHHHHHHHHH-HTCCTTTEEECTTHH
T ss_pred             CCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEEecCcHHHHHHHHHHH-cCCCHHHEeccCCch
Confidence            99999999999999999999999999999999999999998 6899999999999999999998 69999996 556999


Q ss_pred             HHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhc--ccc---hhHHHHHHHhhHHH
Q 020022          160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD--AWL---NGEFITTVQQRGAA  234 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~--~~~---~~~~~~~v~~~~~~  234 (332)
                      |+.|+++++|+++|+++++|+.+ ||||||++++|+||++++    +|.|+.+++.+.  .|.   .+++.+++++++++
T Consensus       152 d~~r~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~e  226 (318)
T 1y6j_A          152 DSIRFRYLLSEKLGVDVKNVHGY-IIGEHGDSQLPLWSCTHI----AGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGAT  226 (318)
T ss_dssp             HHHHHHHHHHTTTTCCTTTEECC-EEBCSSSSCEECCTTCEE----TTBCSCCC-----------CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHeEEE-EecccCCcEeeeehhceE----CCEEHHHHhhhhcccCCHHHHHHHHHHHHHhhHh
Confidence            99999999999999999999985 699999999999999999    999998876432  233   36899999999999


Q ss_pred             HHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          235 IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       235 i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                      +++.||++++. .|.++++++.+ |.+| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|
T Consensus       227 ii~~kg~t~~~-~a~a~~~~~~a-i~~~-~~~~~~~~~~~~G~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l  301 (318)
T 1y6j_A          227 IIKNKGATYYG-IAVSINTIVET-LLKN-QNTIRTVGTVINGMYGI-EDVAISLPSIVNSEGVQEVLQ-FNLTPEEEEAL  301 (318)
T ss_dssp             HHHHTSCCCHH-HHHHHHHHHHH-HHHT-CCCEECCEEEECSBTTB-CSEEEECCEEEETTEEEECCC-CCCCHHHHHHH
T ss_pred             HhhCCCccHHH-HHHHHHHHHHH-HHcC-CCcEEEEEEeecCccCC-cceEEEEEEEEcCCeeEEEec-CCCCHHHHHHH
Confidence            99999976654 46789998876 5556 79999999999999999 89999999997 999999998 89999999999


Q ss_pred             HHHHHHHHHHHHHHh
Q 020022          314 DLTAEELSEEKALAY  328 (332)
Q Consensus       314 ~~s~~~i~~~~~~~~  328 (332)
                      ++|++.|++.++.+.
T Consensus       302 ~~s~~~l~~~~~~~~  316 (318)
T 1y6j_A          302 RFSAEQVKKVLNEVK  316 (318)
T ss_dssp             HHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998653

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=100.00  E-value=1.2e-60  Score=441.25  Aligned_cols=300  Identities=22%  Similarity=0.316  Sum_probs=266.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||||+|++|++++..|+..++..     |++|+|+.++++++++.++|+.|... ...++.++.+.+++++|||+|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~-----el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~~~a~~~aDvV   74 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIAD-----EVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGGYEDTAGSDVV   74 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCS-----EEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECCGGGGTTCSEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCC-----EEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCCHHHhCCCCEE
Confidence            599999988999999999998877654     89999992224667888899999875 444555554568999999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE-echHHHHHH
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC-LTRLDHNRA  164 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~lds~r~  164 (332)
                      |+++|.+++++++|.+++.+|+++++++++.+++++ |+++++++|||+|++|++++++ +++|++|++| ||.||+.|+
T Consensus        75 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~SNPv~~~~~~~~~~-~~~p~~rviG~gt~Ld~~r~  152 (303)
T 1o6z_A           75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSNPVDLLNRHLYEA-GDRSREQVIGFGGRLDSARF  152 (303)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCSSHHHHHHHHHHH-SSSCGGGEEECCHHHHHHHH
T ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHHHH-cCCCHHHeeecccchhHHHH
Confidence            999999999999999999999999999999999998 5799999999999999999999 6999999655 599999999


Q ss_pred             HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccch
Q 020022          165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSA  244 (332)
Q Consensus       165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~  244 (332)
                      ++++|+++|+++++|+.+ ||||||++++|+||++++    +|.|  +++.++.|  +++.+++++++++|++.||.+++
T Consensus       153 ~~~la~~l~v~~~~v~~~-v~G~HG~~~~p~~s~~~v----~g~p--~~~~~~~~--~~~~~~v~~~g~eii~~kg~~~~  223 (303)
T 1o6z_A          153 RYVLSEEFDAPVQNVEGT-ILGEHGDAQVPVFSKVSV----DGTD--PEFSGDEK--EQLLGDLQESAMDVIERKGATEW  223 (303)
T ss_dssp             HHHHHHHHTCCGGGEECC-EEECSSTTEEECGGGCEE----TTBC--CCCCHHHH--HHHHHHHHHHHHHHHTTTSSCCH
T ss_pred             HHHHHHHhCcCHHHeEEE-EEeCCCCccccCCccccc----CCcC--ccCCHHHH--HHHHHHHHHHhHHHHhcCCChHH
Confidence            999999999999999966 599999999999999999    8998  66555444  68999999999999999996665


Q ss_pred             HHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 020022          245 LSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEE  323 (332)
Q Consensus       245 ~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~  323 (332)
                       ++|.++++++.+ |.+| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|++.
T Consensus       224 -~~a~a~~~~~~a-i~~~-~~~~~~~~~~~~g~~g~-~~~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~  298 (303)
T 1o6z_A          224 -GPARGVAHMVEA-ILHD-TGEVLPASVKLEGEFGH-EDTAFGVPVSLGSNGVEEIVE-WDLDDYEQDLMADAAEKLSDQ  298 (303)
T ss_dssp             -HHHHHHHHHHHH-HHTT-CCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHH-HHhC-CCCEEEEEEecCCccCC-cceEEEEEEEEeCCeeEEecC-CCCCHHHHHHHHHHHHHHHHH
Confidence             667789998876 5566 79999999999999999 89999999997 999999998 899999999999999999999


Q ss_pred             HHHH
Q 020022          324 KALA  327 (332)
Q Consensus       324 ~~~~  327 (332)
                      ++.+
T Consensus       299 ~~~~  302 (303)
T 1o6z_A          299 YDKI  302 (303)
T ss_dssp             HHHH
T ss_pred             HHhh
Confidence            8864

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=100.00  E-value=2.1e-60  Score=439.36  Aligned_cols=297  Identities=23%  Similarity=0.342  Sum_probs=256.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee--CChhhhcCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT--TDAVEACTGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~--~~~~~al~~a   82 (332)
                      |||+||||+|+||+++++.|... ++..     ||+|+|+++   +++|.++||+|..  ...+++..  ++.+++++||
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~-----el~L~Di~~---~~~G~a~Dl~~~~--~~~~v~~~~~~~~~~~~~~a   70 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGS-----ELSLYDIAP---VTPGVAVDLSHIP--TAVKIKGFSGEDATPALEGA   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTE-----EEEEECSST---THHHHHHHHHTSC--SSEEEEEECSSCCHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCc-----eEEEEecCC---CchhHHHHhhCCC--CCceEEEecCCCcHHHhCCC
Confidence            59999998899999999999876 5433     899999984   4679999999964  22344432  4679999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH---HHHhCCCC-CCCcEEEech
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI---LKEFAPSI-PAKNITCLTR  158 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~---~~~~~~~~-~~~~i~~~t~  158 (332)
                      |+||+++|.|++||++|+|++.+|+++++++++.|.++| |+++++++|||+|++|++   ++++ +|+ |++|+.|.|.
T Consensus        71 Divii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~-p~a~vlvvtNPvd~~t~~a~~~~k~-sg~~p~~rv~G~~~  148 (312)
T 3hhp_A           71 DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACIGIITNPVNTTVAIAAEVLKK-AGVYDKNKLFGVTT  148 (312)
T ss_dssp             SEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHHHHHHHHHHHHHH-TTCCCTTSEEECCH
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEecCcchhHHHHHHHHHHH-cCCCCcceEEEEec
Confidence            999999999999999999999999999999999999999 689999999999999999   7787 576 9999888889


Q ss_pred             HHHHHHHHHHHHHcCCCCCCeeeeEEEecc-CCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH
Q 020022          159 LDHNRALGQISEKLNVQVSDVKNVIIWGNH-SSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK  237 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v~~~~v~G~h-g~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~  237 (332)
                      ||++|+++++|+++|++|++|+.+ ||||| |+++||+||++      +|.|+.    ++.|  +++.+++++++++|++
T Consensus       149 LD~~R~~~~la~~lgv~~~~v~~~-V~G~Hsg~t~vp~~S~~------~g~~~~----~~~~--~~i~~~v~~~g~eIi~  215 (312)
T 3hhp_A          149 LDIIRSNTFVAELKGKQPGEVEVP-VIGGHSGVTILPLLSQV------PGVSFT----EQEV--ADLTKRIQNAGTEVVE  215 (312)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCCC-EEECSSGGGEEECGGGC------TTCCCC----HHHH--HHHHHHHHTHHHHHHH
T ss_pred             hhHHHHHHHHHHHhCcChhHccee-EEeccCCCceeeecccC------CCCCCC----HHHH--HHHHHHHHhhhHHHHh
Confidence            999999999999999999999966 69999 88999999997      455542    3345  6899999999999999


Q ss_pred             hc--CccchHHHHHHHHHHHHHHH--cCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHHH
Q 020022          238 AR--KLSSALSAASSACDHIRDWV--LGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSRK  311 (332)
Q Consensus       238 ~k--g~~~~~~~a~~~~~~i~~~i--~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~~  311 (332)
                      .|  ++++++++|.++++++.+++  ..| ++.++|+| +++|+ |. .++|||+||++ ++|++++++ + +|+++|++
T Consensus       216 ~k~g~gst~~s~a~a~~~~~~ai~~~l~~-~~~v~~~s-~~~g~-g~-~~v~~s~P~~~g~~Gv~~v~~-~~~L~~~E~~  290 (312)
T 3hhp_A          216 AKAGGGSATLSMGQAAARFGLSLVRALQG-EQGVVECA-YVEGD-GQ-YARFFSQPLLLGKNGVEERKS-IGTLSAFEQN  290 (312)
T ss_dssp             HTTTSCCCCHHHHHHHHHHHHHHHHHHTT-CSSCEEEE-EEECC-CS-SCSEEEEEEEEETTEEEEECC-CCCCCHHHHH
T ss_pred             hccCCCCchhHHHHHHHHHHHHHHHHcCC-CCceEEEE-EecCC-CC-cceEEEeEEEEeCCEEEEEcC-CCCCCHHHHH
Confidence            88  23556677888999877642  455 78899998 88876 43 67899999997 999999998 6 99999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhC
Q 020022          312 KLDLTAEELSEEKALAYSCLS  332 (332)
Q Consensus       312 ~l~~s~~~i~~~~~~~~~~~~  332 (332)
                      +|++|+++|+++++.+++|.+
T Consensus       291 ~l~~s~~~l~~~i~~g~~~~~  311 (312)
T 3hhp_A          291 ALEGMLDTLKKDIALGEEFVN  311 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999964

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=100.00  E-value=9.4e-60  Score=437.75  Aligned_cols=307  Identities=21%  Similarity=0.314  Sum_probs=271.0

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      |+. +++||+||| +|.||+++++.|+..++.+     +|+|+|+++  +++++.++|+.|.......+++++++.++++
T Consensus         1 m~~~~~~kI~IIG-aG~vG~sla~~l~~~~~~~-----ev~l~Di~~--~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al   72 (316)
T 1ldn_A            1 MKNNGGARVVVIG-AGFVGASYVFALMNQGIAD-----EIVLIDANE--SKAIGDAMDFNHGKVFAPKPVDIWHGDYDDC   72 (316)
T ss_dssp             CTTTTSCEEEEEC-CSHHHHHHHHHHHHHTCCS-----EEEEECSSH--HHHHHHHHHHHHHTTSSSSCCEEEECCGGGT
T ss_pred             CCCCCCCEEEEEC-cCHHHHHHHHHHHhCCCCC-----EEEEEeCCc--chHHHHHhhHHHHhhhcCCCeEEEcCcHHHh
Confidence            665 457999999 5999999999999887665     899999984  5788889999997533323555555778999


Q ss_pred             CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEech
Q 020022           80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTR  158 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~  158 (332)
                      +|||+||+++|.++++|++|.+++.+|.++++++++.+++++ |+++++++|||+|++|++++++ +++|++|+ |.||.
T Consensus        73 ~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tNPv~~~~~~~~~~-s~~p~~rviG~gt~  150 (316)
T 1ldn_A           73 RDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNPVDILTYATWKF-SGLPHERVIGSGTI  150 (316)
T ss_dssp             TTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSHHHHHHHHHHH-HTCCGGGEEECTTH
T ss_pred             CCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCCchHHHHHHHHHH-hCCCHHHEEecccc
Confidence            999999999999999999999999999999999999999998 6899999999999999999998 68999996 55599


Q ss_pred             HHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcc-cc---hhHHHHHHHhhHHH
Q 020022          159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDA-WL---NGEFITTVQQRGAA  234 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~-~~---~~~~~~~v~~~~~~  234 (332)
                      ||+.|+++++|+++|+++++|+.+ ||||||++++|+||++++    +|.|+.+++.+.. |.   .+++.+++++++++
T Consensus       151 lD~~r~~~~la~~l~v~~~~v~~~-v~G~HG~~~~p~~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~e  225 (316)
T 1ldn_A          151 LDTARFRFLLGEYFSVAPQNVHAY-IIGEHGDTELPVWSQAYI----GVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQ  225 (316)
T ss_dssp             HHHHHHHHHHHHHHTSCGGGEEEE-EEBCSSTTCEEEEEEEEE----TTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCHHHeEEE-EecccCCceeeeehhccC----CCEEHHHHhhccccCCHHHHHHHHHHHHHhHHH
Confidence            999999999999999999999985 699999999999999999    9999988765433 33   25788899999999


Q ss_pred             HHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          235 IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       235 i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                      +++.||++++. .|.++++++.+ |.+| ++.++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|
T Consensus       226 ii~~kg~~~~~-~a~a~~~~~~a-i~~~-~~~~~~~~~~~~g~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~~~l  300 (316)
T 1ldn_A          226 IIEKKGATYYG-IAMGLARVTRA-ILHN-ENAILTVSAYLDGLYGE-RDVYIGVPAVINRNGIREVIE-IELNDDEKNRF  300 (316)
T ss_dssp             HHHHHSCCCHH-HHHHHHHHHHH-HHTT-CCEEEEEEEEEESTTSC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHH
T ss_pred             HHhccCCcHHH-HHHHHHHHHHH-HHhC-CCcEEEEEEEecCccCC-cceEEEEEEEEeCCeeEEEcc-CCCCHHHHHHH
Confidence            99999977664 45689998876 5666 89999999999999999 89999999997 999999998 89999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 020022          314 DLTAEELSEEKALA  327 (332)
Q Consensus       314 ~~s~~~i~~~~~~~  327 (332)
                      ++|++.|++.++.+
T Consensus       301 ~~s~~~l~~~~~~~  314 (316)
T 1ldn_A          301 HHSAATLKSVLARA  314 (316)
T ss_dssp             HHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998864

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=100.00  E-value=4.2e-61  Score=445.02  Aligned_cols=287  Identities=19%  Similarity=0.267  Sum_probs=254.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~~~~~~~~~~~~~~al~~a   82 (332)
                      +.+||+|||| |.||+++++.|+..++++     +++|+|++  ++++++.++||+|.. ++...++..+++ +++++||
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~-----ev~L~Di~--~~~~~g~a~DL~~~~~~~~~~~i~~t~d-~~~~~da   90 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLAD-----EVALVDVM--EDKLKGEMMDLEHGSLFLHTAKIVSGKD-YSVSAGS   90 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCS-----EEEEECSC--HHHHHHHHHHHHHHGGGSCCSEEEEESS-SCSCSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCC-----eEEEEECC--HHHHHHHHHHhhhhhhcccCCeEEEcCC-HHHhCCC
Confidence            3479999995 999999999999998876     89999997  478999999999974 333455666655 5679999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDH  161 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds  161 (332)
                      |+||+++|.|+++|++|+|++.+|+++++++++.+.++| |+++++++|||+|++|++++++ +|+|++| |+.+|.||+
T Consensus        91 DiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~-P~a~ilvvtNPvdi~t~~~~k~-sg~p~~rViG~gt~LDs  168 (330)
T 3ldh_A           91 KLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKELHPELGTDKNKQDWKL-SGLPMHRIIGSGCNLDS  168 (330)
T ss_dssp             SEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHH-HCCCGGGEECCTTHHHH
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCceEEeCCCccHHHHHHHHHH-hCCCHHHeecccCchhH
Confidence            999999999999999999999999999999999999998 6899999999999999999998 6999999 566799999


Q ss_pred             HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCc
Q 020022          162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKL  241 (332)
Q Consensus       162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~  241 (332)
                      .|+++++|+++|++|++|+++ ||||||+++||+||+                   .| .+++.+++++++++|++.||+
T Consensus       169 ~R~~~~lA~~lgv~~~~V~~~-V~G~Hg~t~vp~~S~-------------------~~-~~~~~~~v~~~g~eii~~kg~  227 (330)
T 3ldh_A          169 ARFRYLMGERLGVHSCLVIGW-VIGQHGDSVPSVWSG-------------------MW-DAKLHKDVVDSAYEVIKLKGY  227 (330)
T ss_dssp             HHHHHHHHHHHTSCTTTCCEE-ECSSSSTTCCEEEEE-------------------EE-ETTEEHHHHHCCCTTSTTCHH
T ss_pred             HHHHHHHHHHhCCCHHHeEEE-EEcCCCCceeeechh-------------------hH-HHHHHHHHHHHHHHHHHccCC
Confidence            999999999999999999987 599999999999997                   12 146788899999999999997


Q ss_pred             cchHHHHH-----------------HHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEecCCcEE--EecC
Q 020022          242 SSALSAAS-----------------SACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWT--IVQG  302 (332)
Q Consensus       242 ~~~~~~a~-----------------~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~~~Gv~~--~~~~  302 (332)
                      ++| ++|.                 ++++++ .+++.| +++++|+|++++|+||+++|+|||+||++.+|+++  +++ 
T Consensus       228 t~~-a~a~~~~~~~~~~~~~~~~~~a~~~~~-~ail~~-~~~v~~~s~~~~g~yg~~~~v~~s~P~~lg~Gv~~~~iv~-  303 (330)
T 3ldh_A          228 TSW-AIGLVVSNPVDVLTYVAWKGCSVADLA-QTIMKD-LCRVHPVSTMVKDFYGIKDNVFLSLPCVLNNGISHCNIVK-  303 (330)
T ss_dssp             HHH-HHHHTTHHHHTTSSSCSCTHHHHHHHH-HHHHHT-CCEEECCBCCCSSSSSCCSCCCCBCCEEEBTTBCTTCCCC-
T ss_pred             cce-eeeeeccCccchhhhhhhHHHHHHHHH-HHHHcC-CCceEEEEeecCCccCCCCceEEEEEEEECCcEEEcceec-
Confidence            665 5566                 677765 457777 89999999999999999779999999985599999  998 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHH
Q 020022          303 LSIDEFSRKKLDLTAEELSEEKAL  326 (332)
Q Consensus       303 ~~l~~~E~~~l~~s~~~i~~~~~~  326 (332)
                      ++|+++|+++|++|++.|++.++.
T Consensus       304 ~~L~~~E~~~l~~s~~~l~~~~~~  327 (330)
T 3ldh_A          304 MKLKPDEEQQLQKSATTLWDIQKD  327 (330)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998874

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=100.00  E-value=5.2e-59  Score=431.46  Aligned_cols=300  Identities=21%  Similarity=0.342  Sum_probs=259.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~~al~~a   82 (332)
                      ++||+|||| |+||++++..|+..+.+      +++|+|+++  +++++.++|+.|...+  ...+++.+++. +++++|
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~------~v~L~Di~~--~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~a   71 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELG------DIVLLDIVE--GVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANS   71 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCS------EEEEECSSS--SHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCC------eEEEEeCCc--cHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCC
Confidence            369999995 99999999999987643      599999985  6788889999986532  23456666665 899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE-echHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC-LTRLDH  161 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t~lds  161 (332)
                      |+||+++|.|+++|++|.+++.+|+++++++++.++++| |+++++++|||+|++|++++++ +|+|++|+.| ||.||+
T Consensus        72 D~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNPv~~~t~~~~~~-~~~~~~rviG~gt~LD~  149 (309)
T 1ur5_A           72 DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNNPLDAMTYLAAEV-SGFPKERVIGQAGVLDA  149 (309)
T ss_dssp             SEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEECCHHHHH
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCCchHHHHHHHHHH-cCCCHHHEEECCcchHH
Confidence            999999999999999999999999999999999999999 6899999999999999999998 7999999655 499999


Q ss_pred             HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH--hc
Q 020022          162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK--AR  239 (332)
Q Consensus       162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~--~k  239 (332)
                      .|+++++|+++|++|++|+.+ ||||||++++|+||++++    +|.|+.+++.++.|  +++.++++++++++++  .|
T Consensus       150 ~r~~~~la~~lgv~~~~v~~~-v~G~Hg~t~~p~~s~~~v----~g~~~~~~~~~~~~--~~~~~~v~~~g~eii~~~~k  222 (309)
T 1ur5_A          150 ARYRTFIAMEAGVSVEDVQAM-LMGGHGDEMVPLPRFSCI----SGIPVSEFIAPDRL--AQIVERTRKGGGEIVNLLKT  222 (309)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEC-CEECSGGGEECCGGGEEE----TTEEGGGTSCHHHH--HHHHHHHHTHHHHHHHHHSS
T ss_pred             HHHHHHHHHHhCCChhheeEE-EecCcCCceeeeeeccee----CCEeHHHHcCHhHH--HHHHHHHHhhhHHhhhhccC
Confidence            999999999999999999976 599999999999999999    99999887765544  6899999999999999  78


Q ss_pred             CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      |+ +++++|.++++++.+ |.+| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       223 gs-~~~~~a~a~~~~~~a-i~~~-~~~~~~~~~~~~g~~g~-~~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~  297 (309)
T 1ur5_A          223 GS-AYYAPAAATAQMVEA-VLKD-KKRVMPVAAYLTGQYGL-NDIYFGVPVILGAGGVEKILE-LPLNEEEMALLNASAK  297 (309)
T ss_dssp             CC-CCHHHHHHHHHHHHH-HHTT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             CC-cHHHHHHHHHHHHHH-HHcC-CCcEEEEEEEecCccCC-cceEEEEEEEEeCCceEEecC-CCCCHHHHHHHHHHHH
Confidence            84 455677789998776 5666 89999999999999999 89999999997 999999998 8999999999999999


Q ss_pred             HHHHHHHHHh
Q 020022          319 ELSEEKALAY  328 (332)
Q Consensus       319 ~i~~~~~~~~  328 (332)
                      .|++.++.+.
T Consensus       298 ~l~~~~~~~~  307 (309)
T 1ur5_A          298 AVRATLDTLK  307 (309)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHh
Confidence            9999998764

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=100.00  E-value=3.1e-59  Score=433.81  Aligned_cols=303  Identities=22%  Similarity=0.369  Sum_probs=261.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCcc--ceEeeCC-hhhhcCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVATTD-AVEACTGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~--~~~~~~~-~~~al~~a   82 (332)
                      |||+||||+|++|+++++.|+..++..     +++|+|+.++++++++.++|+.|.......  ++...++ ++++++||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~-----el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~ga   75 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMK-----DLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDES   75 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCC-----EEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTC
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCC-----EEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCC
Confidence            499999988999999999999877654     899999933346788899999997632213  3333332 58999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEe-chHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLDH  161 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds  161 (332)
                      |+||++||.+++++++|.+++.+|+++++++++.++++|  +++++++|||+|++|++++++ +++|++|++|. |.||+
T Consensus        76 D~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv~~~t~~~~k~-~~~p~~rviG~gt~LD~  152 (313)
T 1hye_A           76 DVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVDVMTYKALVD-SKFERNQVFGLGTHLDS  152 (313)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSHHHHHHHHHHH-HCCCTTSEEECTTHHHH
T ss_pred             CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcHHHHHHHHHHh-hCcChhcEEEeCccHHH
Confidence            999999999999999999999999999999999999998  589999999999999999998 79999996564 99999


Q ss_pred             HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhh--hhcccchhHHHHHHHhhHHHHHHhc
Q 020022          162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV--KDDAWLNGEFITTVQQRGAAIIKAR  239 (332)
Q Consensus       162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~--~~~~~~~~~~~~~v~~~~~~i~~~k  239 (332)
                      .|+++++|+++|+++++|+.+ ||||||++++|+||++++    +|.|+.+++  .++.  .+++.+++++++++++++|
T Consensus       153 ~r~~~~la~~lgv~~~~v~~~-v~G~Hg~~~~p~~s~~~v----~g~~~~~~~~~~~~~--~~~~~~~v~~~g~eii~~k  225 (313)
T 1hye_A          153 LRFKVAIAKFFGVHIDEVRTR-IIGEHGDSMVPLLSATSI----GGIPIQKFERFKELP--IDEIIEDVKTKGEQIIRLK  225 (313)
T ss_dssp             HHHHHHHHHHHTCCGGGEECC-EEECSSTTEEECGGGCEE----TTEEGGGCGGGGGCC--HHHHHHHHHHHTTSCCC--
T ss_pred             HHHHHHHHHHhCcCHHHeEEE-EeeccCCcccceeecccc----CCEEHHHHhcCCHHH--HHHHHHHHHhccceeecCC
Confidence            999999999999999999976 599999999999999999    999998874  3333  3689999999999999999


Q ss_pred             CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCC-CCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHH
Q 020022          240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTA  317 (332)
Q Consensus       240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~y-gi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~  317 (332)
                      |+ +++++|.++++++.+ |.+| ++.++|+|++++|+| |+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|+
T Consensus       226 gs-~~~~~a~a~~~~~~a-i~~~-~~~~~~~~~~~~g~~~g~-~~~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~  300 (313)
T 1hye_A          226 GG-SEFGPAAAILNVVRC-IVNN-EKRLLTLSAYVDGEFDGI-RDVCIGVPVKIGRDGIEEVVS-IELDKDEIIAFRKSA  300 (313)
T ss_dssp             -----CCHHHHHHHHHHH-HHTT-CCEEEEEEEEEESSSSSC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHH
T ss_pred             CC-cHHHHHHHHHHHHHH-HHcC-CCeEEEEEEeecceecCc-cceEEEEEEEEeCCeeEEecC-CCCCHHHHHHHHHHH
Confidence            94 445667789998876 5566 899999999999999 99 89999999997 999999998 899999999999999


Q ss_pred             HHHHHHHHHHh
Q 020022          318 EELSEEKALAY  328 (332)
Q Consensus       318 ~~i~~~~~~~~  328 (332)
                      +.|++.++.+.
T Consensus       301 ~~l~~~~~~~~  311 (313)
T 1hye_A          301 EIIKKYCEEVK  311 (313)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHh
Confidence            99999998764

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=100.00  E-value=2.7e-57  Score=421.70  Aligned_cols=301  Identities=21%  Similarity=0.316  Sum_probs=266.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~~al~~   81 (332)
                      +++||+||| +|.+|++++..|+..+++      +|+|+|+++  +++++.++|+++....  ...+++.+++. +++++
T Consensus         3 ~~~kI~VIG-aG~vG~~ia~~la~~g~~------~v~L~Di~~--~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~   72 (322)
T 1t2d_A            3 PKAKIVLVG-SGMIGGVMATLIVQKNLG------DVVLFDIVK--NMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAG   72 (322)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCC------EEEEECSSS--SHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCC------eEEEEeCCH--HHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCC
Confidence            457999999 599999999999988753      599999985  6788889999886432  23456666666 99999


Q ss_pred             CcEEEEeCCCCCCCCCC-----HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE-
Q 020022           82 VNIAVMVGGFPRKEGME-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC-  155 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~-----r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-  155 (332)
                      ||+||+++|.|+++|++     |.|++.+|+++++++++.|+++| |++++|++|||+++++++++++ +|+|++|+.| 
T Consensus        73 aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~~t~~~~~~-~g~~~~rviG~  150 (322)
T 1t2d_A           73 ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVMVQLLHQH-SGVPKNKIIGL  150 (322)
T ss_dssp             CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHHHHHHHHH-HCCCGGGEEEC
T ss_pred             CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHHHHHHHHHh-cCCChHHEEec
Confidence            99999999999999999     99999999999999999999999 6899999999999999999998 7899999655 


Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc----hhHHHHHHHhh
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL----NGEFITTVQQR  231 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~----~~~~~~~v~~~  231 (332)
                      +|.||++|+++++|+++|+++++|+.+ ||||||++++|+||++++    +|.|+.+++.+. |.    .+++.++++++
T Consensus       151 gt~ld~~R~~~~la~~lgv~~~~v~~~-v~G~HG~~~~p~~s~~~v----~g~~~~~~~~~~-~~~~~~~~~~~~~v~~~  224 (322)
T 1t2d_A          151 GGVLDTSRLKYYISQKLNVCPRDVNAH-IVGAHGNKMVLLKRYITV----GGIPLQEFINNK-LISDAELEAIFDRTVNT  224 (322)
T ss_dssp             CHHHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEE----TTEEHHHHHHTT-SSCHHHHHHHHHHHHTH
T ss_pred             cCcccHHHHHHHHHHHhCCCHHHeEEE-EEcCCCCcEEeeHHHceE----CcEeHHHhcccc-CCCHHHHHHHHHHHHHH
Confidence            599999999999999999999999987 599999999999999999    999999876543 32    35788899999


Q ss_pred             HHHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHH
Q 020022          232 GAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSR  310 (332)
Q Consensus       232 ~~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~  310 (332)
                      +++|++.|| ++++++|.++++++.+ |.+| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+
T Consensus       225 g~eii~~kg-s~~~~~a~a~~~~~~a-i~~~-~~~v~~~s~~~~g~~g~-~~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~  299 (322)
T 1t2d_A          225 ALEIVNLHA-SPYVAPAAAIIEMAES-YLKD-LKKVLICSTLLEGQYGH-SDIFGGTPVVLGANGVEQVIE-LQLNSEEK  299 (322)
T ss_dssp             HHHHHHHTS-SCCHHHHHHHHHHHHH-HHTT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHH
T ss_pred             HHHHHhccC-chHHHHHHHHHHHHHH-HHhC-CCCEEEEEEEecCccCC-CceEEEEEEEEeCCeeEEeCC-CCCCHHHH
Confidence            999999999 4556677789998876 5666 89999999999999999 89999999997 999999998 89999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 020022          311 KKLDLTAEELSEEKALA  327 (332)
Q Consensus       311 ~~l~~s~~~i~~~~~~~  327 (332)
                      ++|++|++.|++.++.+
T Consensus       300 ~~l~~s~~~L~~~~~~~  316 (322)
T 1t2d_A          300 AKFDEAIAETKRMKALA  316 (322)
T ss_dssp             HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999998765

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=100.00  E-value=1.2e-56  Score=419.20  Aligned_cols=306  Identities=20%  Similarity=0.330  Sum_probs=268.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChhhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~~a   78 (332)
                      |..+++||+||| +|.+|++++..|+..+++      +|+|+|+++  +++++.++|+.|....  ...+++.+++..++
T Consensus         5 ~~~~~~kI~VIG-aG~vG~~lA~~la~~g~~------~V~L~D~~~--~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea   75 (331)
T 1pzg_A            5 LVQRRKKVAMIG-SGMIGGTMGYLCALRELA------DVVLYDVVK--GMPEGKALDLSHVTSVVDTNVSVRAEYSYEAA   75 (331)
T ss_dssp             CCSCCCEEEEEC-CSHHHHHHHHHHHHHTCC------EEEEECSSS--SHHHHHHHHHHHHHHHTTCCCCEEEECSHHHH
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHHhCCCC------eEEEEECCh--hHHHHHHHHHHhhhhccCCCCEEEEeCCHHHH
Confidence            334568999999 599999999999987642      599999985  6788878888886532  23567777888779


Q ss_pred             cCCCcEEEEeCCCCCCCCC-----CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE
Q 020022           79 CTGVNIAVMVGGFPRKEGM-----ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI  153 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~-----~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i  153 (332)
                      +++||+||+++|.|+++|+     +|.+++.+|+++++++++.|.++| |++++|++|||++++|++++++ +++|++|+
T Consensus        76 ~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~~t~~~~~~-~~~~~~rv  153 (331)
T 1pzg_A           76 LTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCMVKVMCEA-SGVPTNMI  153 (331)
T ss_dssp             HTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGE
T ss_pred             hCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHHHHHHHHHh-cCCChhcE
Confidence            9999999999999999999     999999999999999999999999 6899999999999999999998 79999996


Q ss_pred             EEe-chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc----hhHHHHHH
Q 020022          154 TCL-TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL----NGEFITTV  228 (332)
Q Consensus       154 ~~~-t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~----~~~~~~~v  228 (332)
                      .|. |.||+.|+++++|+++|+++++|+.+ |||+||+++||+||++++    +|.|+.+++.+ .|.    .+++.+.+
T Consensus       154 iG~gt~LD~~R~~~~la~~lgv~~~~v~~~-v~G~Hg~~~~p~~s~~~v----~G~~~~~~~~~-~~~~~~~~~~~~~~~  227 (331)
T 1pzg_A          154 CGMACMLDSGRFRRYVADALSVSPRDVQAT-VIGTHGDCMVPLVRYITV----NGYPIQKFIKD-GVVTEKQLEEIAEHT  227 (331)
T ss_dssp             EECCHHHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEE----TTEEHHHHHHT-TSSCHHHHHHHHHHH
T ss_pred             EeccchHHHHHHHHHHHHHhCCCHHHceEE-EecCCCCCEeeeeecceE----CCEEHHHHhhc-ccCCHHHHHHHHHHH
Confidence            554 99999999999999999999999976 599999999999999999    99999987643 232    25677788


Q ss_pred             HhhHHHHHH--hcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCC
Q 020022          229 QQRGAAIIK--ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSI  305 (332)
Q Consensus       229 ~~~~~~i~~--~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l  305 (332)
                      +++++++++  +|| ++++++|.++++++.+ |.+| +++++++|++++|+||+ +|+|+|+||++ ++|++++++ ++|
T Consensus       228 ~~~g~eii~~~~kg-st~~~~a~a~~~ii~a-i~~~-~~~~~~~~v~~~G~~g~-~~~~~~vP~~vg~~Gv~~i~~-~~L  302 (331)
T 1pzg_A          228 KVSGGEIVRFLGQG-SAYYAPAASAVAMATS-FLND-EKRVIPCSVYCNGEYGL-KDMFIGLPAVIGGAGIERVIE-LEL  302 (331)
T ss_dssp             HHHHHHHHHHHSSS-CCCHHHHHHHHHHHHH-HHTT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCC
T ss_pred             HhccHHHHHhhcCC-CccchHHHHHHHHHHH-HHhC-CCcEEEEEEEecCccCC-CceEEEEEEEEeCCeeEEecC-CCC
Confidence            899999999  787 4556667789998776 6666 89999999999999999 89999999997 999999998 899


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHh
Q 020022          306 DEFSRKKLDLTAEELSEEKALAY  328 (332)
Q Consensus       306 ~~~E~~~l~~s~~~i~~~~~~~~  328 (332)
                      +++|+++|++|++.|++.++.+.
T Consensus       303 ~~~e~~~l~~s~~~l~~~~~~~~  325 (331)
T 1pzg_A          303 NEEEKKQFQKSVDDVMALNKAVA  325 (331)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999998764

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=100.00  E-value=1.9e-56  Score=412.15  Aligned_cols=286  Identities=17%  Similarity=0.262  Sum_probs=245.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +++||+||| +|.||+.+++.|+..++++     +|+|+|+++  + +.+.++|+.|...   .+++.+++ +++++|||
T Consensus        13 ~~~kV~ViG-aG~vG~~~a~~l~~~g~~~-----ev~L~Di~~--~-~~g~a~dl~~~~~---~~i~~t~d-~~~l~~aD   79 (303)
T 2i6t_A           13 TVNKITVVG-GGELGIACTLAISAKGIAD-----RLVLLDLSE--G-TKGATMDLEIFNL---PNVEISKD-LSASAHSK   79 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHHTCCS-----EEEEECCC--------CHHHHHHHTC---TTEEEESC-GGGGTTCS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEcCCc--c-hHHHHHHHhhhcC---CCeEEeCC-HHHHCCCC
Confidence            357999999 5999999999999888765     899999985  4 6788899998543   26777766 49999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEe-chHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds~  162 (332)
                      +||+++|.+ ++|++|.|++.+|+++++++++.++++| |++++|++|||+|++|++++++ +++|++|++|. |.||+.
T Consensus        80 ~Vi~aag~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~~~t~~~~~~-~~~p~~rviG~gt~Ld~~  156 (303)
T 2i6t_A           80 VVIFTVNSL-GSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVEIMTYVTWKL-STFPANRVIGIGCNLDSQ  156 (303)
T ss_dssp             EEEECCCC-----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHH
T ss_pred             EEEEcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHHHHHHHHHHh-cCCCHHHeeCCCCCchHH
Confidence            999999996 7999999999999999999999999999 7899999999999999999998 79999996565 999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS  242 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~  242 (332)
                      |+++++|+++|+++++|+.+ |||+||++++|+||+...                 |..+++.++++++++++++.|| +
T Consensus       157 R~~~~la~~lgv~~~~v~~~-v~G~Hg~s~~p~~s~~~~-----------------~~~~~~~~~~~~~g~eii~~kG-s  217 (303)
T 2i6t_A          157 RLQYIITNVLKAQTSGKEVW-VIGEQGEDKVLTWSGQEE-----------------VVSHTSQVQLSNRAMELLRVKG-Q  217 (303)
T ss_dssp             HHHHHHHHTSCCTTGGGGEE-EEBSCSSSCEEEEBCSSC-----------------CCCHHHHHHHHHHHHTTSSSCC-C
T ss_pred             HHHHHHHHHcCCChHHeEEE-EecCCCCCcccccccccc-----------------ccHHHHHHHHHHHHHHHHHccC-c
Confidence            99999999999999999977 589999999999998410                 2335788889999999999998 5


Q ss_pred             chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHHHHHHHHHHHH
Q 020022          243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSRKKLDLTAEEL  320 (332)
Q Consensus       243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~~~l~~s~~~i  320 (332)
                      +++++|.++++++.+ |.+| ++.++|++++++|+||+|+|+|+|+||++ ++|++++++ + +|+++|+++|++|++.|
T Consensus       218 t~~~~a~a~~~i~~a-i~~~-~~~~~~vs~~~~g~yg~~~~~~~~vP~~ig~~Gv~~i~~-~~~l~~~e~~~l~~s~~~l  294 (303)
T 2i6t_A          218 RSWSVGLSVADMVDS-IVNN-KKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIK-TTLKEDTVTEKLQSSASSI  294 (303)
T ss_dssp             CHHHHHHHHHHHHHH-HHTT-CCEEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECC-BCC-CCHHHHHHHHHHHHH
T ss_pred             hHHhHHHHHHHHHHH-HHcC-CCcEEEEEEEeCCccCCCCCeEEEEEEEEECCccEEecC-CCCCCHHHHHHHHHHHHHH
Confidence            566777889998776 6666 88999999999999999889999999997 999999988 6 89999999999999999


Q ss_pred             HHHHHHH
Q 020022          321 SEEKALA  327 (332)
Q Consensus       321 ~~~~~~~  327 (332)
                      ++.++.+
T Consensus       295 ~~~~~~~  301 (303)
T 2i6t_A          295 HSLQQQL  301 (303)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHHh
Confidence            9998754

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=100.00  E-value=5.9e-56  Score=413.92  Aligned_cols=301  Identities=22%  Similarity=0.338  Sum_probs=265.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~~al~~a   82 (332)
                      ++||+||| +|.+|++++..|+..+++      +|+|+|+++  +++++.++|+.+....  ...+++.+++. +++++|
T Consensus        14 ~~kI~ViG-aG~vG~~iA~~la~~g~~------~V~L~Di~~--~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~a   83 (328)
T 2hjr_A           14 RKKISIIG-AGQIGSTIALLLGQKDLG------DVYMFDIIE--GVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNS   83 (328)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCC------EEEEECSST--THHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCC------eEEEEECCH--HHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCC
Confidence            46999999 599999999999987653      599999984  6788888888886532  23467777776 899999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEe-chHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLDH  161 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~lds  161 (332)
                      |+||+++|.|+++|++|.|++.+|+++++++++.|.++| |++++|++|||++++++++++. +|+|++|+.|. |.||+
T Consensus        84 D~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~~~t~~~~~~-~~~~~~rviG~~t~Ld~  161 (328)
T 2hjr_A           84 DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLDAMVYYFKEK-SGIPANKVCGMSGVLDS  161 (328)
T ss_dssp             SEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEESCHHHHH
T ss_pred             CEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchHHHHHHHHHh-cCCChhhEEEeCcHHHH
Confidence            999999999999999999999999999999999999999 6899999999999999999997 78999997665 79999


Q ss_pred             HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccch----hHHHHHHHhhHHHHHH
Q 020022          162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLN----GEFITTVQQRGAAIIK  237 (332)
Q Consensus       162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~----~~~~~~v~~~~~~i~~  237 (332)
                      +|+++++|+++|+++++|+.+ |||+||++++|+||++++    +|.|+.+++++ .|..    +++.++++++++++++
T Consensus       162 ~R~~~~la~~lgv~~~~v~~~-v~G~Hg~t~~p~~s~~~v----~G~~~~~~~~~-~~~~~~~~~~~~~~v~~~g~eii~  235 (328)
T 2hjr_A          162 ARFRCNLSRALGVKPSDVSAI-VVGGHGDEMIPLTSSVTI----GGILLSDFVEQ-GKITHSQINEIIKKTAFGGGEIVE  235 (328)
T ss_dssp             HHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEE----TTEEHHHHHHT-TSSCHHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHeeEE-EecCCCCceeeeeeeceE----CCEEHHHHhhc-cCCCHHHHHHHHHHHHhhHHHHHh
Confidence            999999999999999999977 599999999999999999    99999988654 3432    5677888999999999


Q ss_pred             --hcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          238 --ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       238 --~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                        +||+ +++++|.++++++.+ |.+| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|+
T Consensus       236 ~~~~gs-~~~~~a~a~~~i~~a-i~~~-~~~v~~~~v~~~G~~g~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~  310 (328)
T 2hjr_A          236 LLKTGS-AFYAPAASAVAMAQA-YLKD-SKSVLVCSTYLTGQYNV-NNLFVGVPVVIGKNGIEDVVI-VNLSDDEKSLFS  310 (328)
T ss_dssp             HHSSCC-CCHHHHHHHHHHHHH-HHTT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHH
T ss_pred             hhCCCc-hHHHHHHHHHHHHHH-HHcC-CCcEEEEEEeecCccCC-CceEEEEEEEEeCCeeEEecC-CCCCHHHHHHHH
Confidence              5774 455667789998776 5666 78999999999999999 89999999997 999999998 899999999999


Q ss_pred             HHHHHHHHHHHHHh
Q 020022          315 LTAEELSEEKALAY  328 (332)
Q Consensus       315 ~s~~~i~~~~~~~~  328 (332)
                      +|++.|++.++.+.
T Consensus       311 ~s~~~l~~~~~~~~  324 (328)
T 2hjr_A          311 KSVESIQNLVQDLK  324 (328)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998765

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=100.00  E-value=3.3e-55  Score=409.56  Aligned_cols=324  Identities=53%  Similarity=0.856  Sum_probs=279.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      |+ ++|||+||||+|++|++++..|+..+.++..+..+|+|+|+++..+++++.++|+.|...++..++..+.+.+++++
T Consensus         1 m~-~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~   79 (327)
T 1y7t_A            1 MK-APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFK   79 (327)
T ss_dssp             CC-CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTT
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhC
Confidence            53 35799999988999999999999877643223348999998743355677788998865444456666678899999


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHH
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLD  160 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~ld  160 (332)
                      ++|+|||+||.+++++++|.+++..|+.+++++++.+++++.|+++++++|||++.++++.++..++++++++++.|.+|
T Consensus        80 ~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~  159 (327)
T 1y7t_A           80 DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLD  159 (327)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHH
T ss_pred             CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHH
Confidence            99999999999998899999999999999999999999996346899999999999999888863378888899999999


Q ss_pred             HHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcC
Q 020022          161 HNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK  240 (332)
Q Consensus       161 s~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg  240 (332)
                      +.|+.+.+++++|+++..++..+|||+||++++|+|+++.+    +|.|+.+++.+ .|..+++.+++++++++|++.||
T Consensus       160 ~er~~~~~a~~~g~~~~~vr~~~V~G~h~~~~~~~~~~~~~----~g~~l~~~~~~-~~~~~~~~~~v~~~g~~ii~~kg  234 (327)
T 1y7t_A          160 HNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEV----DGRPALELVDM-EWYEKVFIPTVAQRGAAIIQARG  234 (327)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECCEEEBCSSTTCEEECSSCEE----TTEEGGGTSCH-HHHHHTHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhCcChhheeeeEEEcCCCCeEEEEeeeeee----CCeeHHHhccc-hhHHHHHHHHHHHHHHHHHHccC
Confidence            99999999999999999999877899999999999999999    99999877643 45557899999999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEecCCcEEEecCCCCCHHHHHHHHHHHHHH
Q 020022          241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEEL  320 (332)
Q Consensus       241 ~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~~~Gv~~~~~~~~l~~~E~~~l~~s~~~i  320 (332)
                      +++++++|.++++++.+++.+.|+++++|+|++++|+||+|+|+|||+||++++|++++++.++|+++|+++|++|++.|
T Consensus       235 ~~~~~~~a~a~~~~~~~i~~~~~~~~~~~~~~~~~g~yg~~~~~~~~~P~~i~~G~~~i~~~~~l~~~e~~~l~~s~~~l  314 (327)
T 1y7t_A          235 ASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQEL  314 (327)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTBCCTTCCEEEEEECSSGGGCCTTSEEEEEEEEETTEEEECCCCCCCHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCCCeEEEEEEEecCccCCCCCeEEEEEEEEcCCeEEecCCCCCCHHHHHHHHHHHHHH
Confidence            88888878789998887554322588999999999999999999999999889999999875899999999999999999


Q ss_pred             HHHHHHHhhh
Q 020022          321 SEEKALAYSC  330 (332)
Q Consensus       321 ~~~~~~~~~~  330 (332)
                      +++++.+.++
T Consensus       315 ~~~~~~~~~~  324 (327)
T 1y7t_A          315 LDEMEQVKAL  324 (327)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHhc
Confidence            9999988753

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=100.00  E-value=3.1e-55  Score=406.57  Aligned_cols=301  Identities=23%  Similarity=0.363  Sum_probs=262.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~~al~~aD   83 (332)
                      |||+||| +|.+|++++..|+..++..     +|+|+|+++  +++++..+|+.+....  ...++..+++. +++++||
T Consensus         1 mkI~VIG-aG~vG~~la~~la~~~~g~-----~V~l~D~~~--~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~~l~~aD   71 (310)
T 1guz_A            1 MKITVIG-AGNVGATTAFRLAEKQLAR-----ELVLLDVVE--GIPQGKALDMYESGPVGLFDTKVTGSNDY-ADTANSD   71 (310)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCS-----EEEEECSSS--SHHHHHHHHHHTTHHHHTCCCEEEEESCG-GGGTTCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCC-----EEEEEeCCh--hHHHHHHHhHHhhhhcccCCcEEEECCCH-HHHCCCC
Confidence            5999999 5999999999998864322     899999985  6777777788775321  23356666665 4599999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHN  162 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~  162 (332)
                      +||++++.|+++|++|.|++.+|+++++++++.|.+++ |+++++++|||++.++++++++ +++|++|+ +.||.||+.
T Consensus        72 vViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~~~~~~~~~~~-~~~~~~rviG~gt~ld~~  149 (310)
T 1guz_A           72 IVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSNPLDIMTHVAWVR-SGLPKERVIGMAGVLDAA  149 (310)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCSSHHHHHHHHHHH-HCSCGGGEEEECHHHHHH
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcCchHHHHHHHHHh-cCCChHHEEECCCchHHH
Confidence            99999999999999999999999999999999999998 6899999999999999999998 78999885 555999999


Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH--hcC
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK--ARK  240 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~--~kg  240 (332)
                      |+++++|+++|+++++|+.+ |||+||++++|+||++++    +|+|+.+++.++.|  +++.+++++++++|++  .||
T Consensus       150 r~~~~la~~l~v~~~~v~~~-v~G~Hg~~~~p~~s~~~v----~g~~~~~~~~~~~~--~~~~~~v~~~g~~ii~~~~kg  222 (310)
T 1guz_A          150 RFRSFIAMELGVSMQDINAC-VLGGHGDAMVPVVKYTTV----AGIPISDLLPAETI--DKLVERTRNGGAEIVEHLKQG  222 (310)
T ss_dssp             HHHHHHHHHHTCCGGGEECC-EEECSGGGEEECGGGCEE----TTEEHHHHSCHHHH--HHHHHHHHTHHHHHHHHHSSS
T ss_pred             HHHHHHHHHhCCCHHHeEEE-EEcccCCcEeeeeecccC----CCEEHHHHCCHHHH--HHHHHHHHHhHHHHHhhcCCC
Confidence            99999999999999999976 599999999999999999    99999988765544  6899999999999999  788


Q ss_pred             ccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHH
Q 020022          241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEE  319 (332)
Q Consensus       241 ~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~  319 (332)
                       ++++++|.++++++.+ |.+| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.
T Consensus       223 -s~~~~~a~a~~~~~~a-i~~~-~~~~~~~~~~~~g~~g~-~~~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~  297 (310)
T 1guz_A          223 -SAFYAPASSVVEMVES-IVLD-RKRVLPCAVGLEGQYGI-DKTFVGVPVKLGRNGVEQIYE-INLDQADLDLLQKSAKI  297 (310)
T ss_dssp             -CCCHHHHHHHHHHHHH-HHTT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHH
T ss_pred             -CcHHHHHHHHHHHHHH-HHcC-CCcEEEEEEeecCccCC-cceEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHHH
Confidence             4555677789998776 5666 89999999999999999 89999999997 999999998 89999999999999999


Q ss_pred             HHHHHHHHhh
Q 020022          320 LSEEKALAYS  329 (332)
Q Consensus       320 i~~~~~~~~~  329 (332)
                      |++.++.+.+
T Consensus       298 l~~~~~~~~~  307 (310)
T 1guz_A          298 VDENCKMLES  307 (310)
T ss_dssp             HHHHHHTC--
T ss_pred             HHHHHHHHhh
Confidence            9999987654

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=100.00  E-value=1.9e-55  Score=408.18  Aligned_cols=298  Identities=22%  Similarity=0.320  Sum_probs=252.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee---CChhhhcCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT---TDAVEACTGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~---~~~~~al~~a   82 (332)
                      |||+||||+|+||++++..|+..++..     +|+|+|+++    .++.++||.|...+  .+++.+   ++..+|++||
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~-----ev~L~Di~~----~~~~a~dL~~~~~~--~~l~~~~~t~d~~~a~~~a   69 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVS-----RLTLYDIAH----TPGVAADLSHIETR--ATVKGYLGPEQLPDCLKGC   69 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCS-----EEEEEESSS----HHHHHHHHTTSSSS--CEEEEEESGGGHHHHHTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCc-----EEEEEeCCc----cHHHHHHHhccCcC--ceEEEecCCCCHHHHhCCC
Confidence            599999966999999999999877644     899999984    57788999987643  245542   4566789999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEech
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCLTR  158 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~t~  158 (332)
                      |+||+++|.++++|++|.+++.+|+++++++++.|++++ |++++|++|||+|++++    ++++. +++|++|++|.|.
T Consensus        70 DvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~~~~~~~~-~~~p~~rvig~t~  147 (314)
T 1mld_A           70 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISNPVNSTIPITAEVFKKH-GVYNPNKIFGVTT  147 (314)
T ss_dssp             SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHHHHHHHHHHHHHHT-TCCCTTSEEECCH
T ss_pred             CEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCCcchhHHHHHHHHHHc-CCCCcceEEEeec
Confidence            999999999999999999999999999999999999999 68999999999999984    45565 7899999877799


Q ss_pred             HHHHHHHHHHHHHcCCCCCCeeeeEEEecc-CCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH
Q 020022          159 LDHNRALGQISEKLNVQVSDVKNVIIWGNH-SSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK  237 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v~~~~v~G~h-g~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~  237 (332)
                      ||+.|+++++|+++|++|++|+.+ ||||| |++++|+||++++    ..    + +.++.|  +++.+++++++++|++
T Consensus       148 Ld~~r~~~~la~~l~v~~~~v~~~-v~G~H~G~~~~p~~s~~~~----~~----~-~~~~~~--~~~~~~v~~~g~eii~  215 (314)
T 1mld_A          148 LDIVRANAFVAELKGLDPARVSVP-VIGGHAGKTIIPLISQCTP----KV----D-FPQDQL--STLTGRIQEAGTEVVK  215 (314)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCBCC-EEECSSGGGEEECGGGCBS----CC----C-CCHHHH--HHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhCcChHhEEEE-EccCCCCCcEeeecccCCC----cc----c-CCHHHH--HHHHHHHHHHHHHHHh
Confidence            999999999999999999999966 58999 7999999999985    21    1 223334  6899999999999999


Q ss_pred             hc-C-ccchHHHHHHHHHHHHHHHcCCC-CceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHHHH
Q 020022          238 AR-K-LSSALSAASSACDHIRDWVLGTP-EGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSRKK  312 (332)
Q Consensus       238 ~k-g-~~~~~~~a~~~~~~i~~~i~~~~-~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~~~  312 (332)
                      .| | +++++++|.++++++.+++.+.+ ++.++++ ++++|+|  |+|+|||+||++ ++|++++++ + +|+++|+++
T Consensus       216 ~k~~~g~t~~~~a~a~~~~~~ai~~~~~g~~~v~~~-~~~~g~y--~~~~~~~~P~~ig~~Gv~~i~~-l~~l~~~e~~~  291 (314)
T 1mld_A          216 AKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVEC-SFVKSQE--TDCPYFSTPLLLGKKGIEKNLG-IGKISPFEEKM  291 (314)
T ss_dssp             HHTTSCSCCHHHHHHHHHHHHHHHHHHHTCTTCEEE-EEEECCS--SSSSEEEEEEEEETTEEEEECC-CCSCCHHHHHH
T ss_pred             hhcCCCCcchhHHHHHHHHHHHHHcCcCCCcceEEE-EEeCCcc--CCceEEEEEEEEeCCeeEEecC-CCCCCHHHHHH
Confidence            66 2 13346677789998877554321 2368888 7999999  689999999997 999999987 8 999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhC
Q 020022          313 LDLTAEELSEEKALAYSCLS  332 (332)
Q Consensus       313 l~~s~~~i~~~~~~~~~~~~  332 (332)
                      |++|++.|++.++.+.+|.+
T Consensus       292 l~~s~~~l~~~~~~~~~~~~  311 (314)
T 1mld_A          292 IAEAIPELKASIKKGEEFVK  311 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999864

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=100.00  E-value=2e-55  Score=406.63  Aligned_cols=295  Identities=19%  Similarity=0.288  Sum_probs=232.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.+|++++..|+..+.++     +|+|+|+++  +++++.++|+.|.. +......++.+.++++++||+|
T Consensus         1 mkI~VIG-aG~vG~~la~~la~~g~~~-----eV~L~D~~~--~~~~~~~~~l~~~~-~~~~~~~i~~~~~~a~~~aDvV   71 (304)
T 2v6b_A            1 MKVGVVG-TGFVGSTAAFALVLRGSCS-----ELVLVDRDE--DRAQAEAEDIAHAA-PVSHGTRVWHGGHSELADAQVV   71 (304)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCS-----EEEEECSSH--HHHHHHHHHHTTSC-CTTSCCEEEEECGGGGTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCC-----EEEEEeCCH--HHHHHHHHhhhhhh-hhcCCeEEEECCHHHhCCCCEE
Confidence            5999999 5999999999999887655     899999984  67788889998865 2223333332357899999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHHHH
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRA  164 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r~  164 (332)
                      |+++|.++++|++|.|++.+|+++++++++.+.+++ |++++|++|||++++++++++++   |++|+ +.+|.||+.|+
T Consensus        72 Ii~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~~~~~~~---~~~rviG~gt~Ld~~r~  147 (304)
T 2v6b_A           72 ILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTDLATQLA---PGQPVIGSGTVLDSARF  147 (304)
T ss_dssp             EECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHHHHHHHS---CSSCEEECTTHHHHHHH
T ss_pred             EEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHHHHHHhC---ChhcEEeCCcCchHHHH
Confidence            999999999999999999999999999999999998 68999999999999999999984   77886 55699999999


Q ss_pred             HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcc--c---chhHHHHHHHhhHHHHHHhc
Q 020022          165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDA--W---LNGEFITTVQQRGAAIIKAR  239 (332)
Q Consensus       165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~--~---~~~~~~~~v~~~~~~i~~~k  239 (332)
                      ++++|+++|+++.+|+.+ ||||||++++|+||++++    +|+|+.+++.+..  |   ..+++.+++++++++|++.|
T Consensus       148 ~~~la~~l~v~~~~v~~~-v~G~Hg~~~~p~~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~eii~~k  222 (304)
T 2v6b_A          148 RHLMAQHAGVDGTHAHGY-VLGEHGDSEVLAWSSAMV----AGMPVADFMQAQNLPWNEQVRAKIDEGTRNAAASIIEGK  222 (304)
T ss_dssp             HHHHHHHHTSCGGGEECC-EEESSSTTEEECGGGCEE----TTEEHHHHHHHHTCCCSHHHHHHHHHHHTC---------
T ss_pred             HHHHHHHhCcCHHHceEE-EecCCCCceeeehhHccC----CCEEHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999985 699999999999999999    9999998765432  4   23678899999999999999


Q ss_pred             CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      |++++. .|.++++++.+ |.+| +++++|+|++++| ||    +|+|+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       223 g~t~~~-~a~a~~~~~~a-i~~~-~~~~~~~~~~~~g-yg----~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~  293 (304)
T 2v6b_A          223 RATYYG-IGAALARITEA-VLRD-RRAVLTVSAPTPE-YG----VSLSLPRVVGRQGVLSTLH-PKLTGDEQQKLEQSAG  293 (304)
T ss_dssp             --CCHH-HHHHHHHHHHH-HHTT-CCEEEEEEEEETT-TT----EEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             CCcHHH-HHHHHHHHHHH-HHhC-CCcEEEEEEEECC-cC----cEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHH
Confidence            976654 46789998876 5566 8999999999999 97    899999997 999999998 8999999999999999


Q ss_pred             HHHHHHHHH
Q 020022          319 ELSEEKALA  327 (332)
Q Consensus       319 ~i~~~~~~~  327 (332)
                      .|++.++.+
T Consensus       294 ~l~~~~~~~  302 (304)
T 2v6b_A          294 VLRGFKQQL  302 (304)
T ss_dssp             HHHC-----
T ss_pred             HHHHHHHHh
Confidence            999988764

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=100.00  E-value=4.7e-54  Score=400.90  Aligned_cols=298  Identities=23%  Similarity=0.332  Sum_probs=251.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe---eCChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA---TTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~---~~~~~~al~   80 (332)
                      ++|||+||||+|+||++++..|+..++..     +|+|+|+++  +  ++.++||.+...+  ..+..   +++.+++++
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~-----ev~l~Di~~--~--~~~~~dL~~~~~~--~~v~~~~~t~d~~~al~   75 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVS-----VLHLYDVVN--A--PGVTADISHMDTG--AVVRGFLGQQQLEAALT   75 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEE-----EEEEEESSS--H--HHHHHHHHTSCSS--CEEEEEESHHHHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCC-----EEEEEeCCC--c--HhHHHHhhccccc--ceEEEEeCCCCHHHHcC
Confidence            56899999988999999999998876433     899999985  2  6678899886432  23333   346678999


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc----hHHHHHHhCCCCCCCcEEEe
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT----NALILKEFAPSIPAKNITCL  156 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~----~~~~~~~~~~~~~~~~i~~~  156 (332)
                      |||+||+++|.+++++++|.+++.+|+++++++++.+.+++ |+++|+++|||+|+    +++.+++. +++|++|++|.
T Consensus        76 gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SNPv~~~~~~~t~~~~~~-~~~p~~rviG~  153 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISNPVNSTVPIAAEVFKKA-GTYDPKRLLGV  153 (326)
T ss_dssp             TCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHHHHHHHHHHHHHH-TCCCTTSEEEC
T ss_pred             CCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCchHHHHHHHHHHHHHc-cCCCcccEEEE
Confidence            99999999999999999999999999999999999999999 67999999999999    66666887 79999998777


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEecc-CCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHH
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH-SSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAI  235 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h-g~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i  235 (332)
                      |.||+.|+++++|+++|++|++|+.+ ||||| |++++|+||++++    ...     +.++.|  +++.+++++++++|
T Consensus       154 ~~Ld~~r~~~~la~~l~v~~~~v~~~-v~G~H~G~~~~p~~s~~~v----~~~-----~~~~~~--~~~~~~v~~~g~ei  221 (326)
T 1smk_A          154 TMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKP----PSS-----FTQEEI--SYLTDRIQNGGTEV  221 (326)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGCBCC-EEECSSGGGEEECGGGCBS----CCC-----CCHHHH--HHHHHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHhCcChhheEEE-EecccCCceEEEecccCee----cCc-----CCHHHH--HHHHHHHHHHHHHH
Confidence            99999999999999999999999966 58999 8999999999998    321     223334  68999999999999


Q ss_pred             HHhc-C-ccchHHHHHHHHHHHHHHH---cCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHH
Q 020022          236 IKAR-K-LSSALSAASSACDHIRDWV---LGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFS  309 (332)
Q Consensus       236 ~~~k-g-~~~~~~~a~~~~~~i~~~i---~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E  309 (332)
                      ++.| | +++++++|.++++++.+ |   .+| ++.++|++ +++|+  +|+|+|+|+||++ ++|++++++.++|+++|
T Consensus       222 i~~k~~~gs~~~~~a~a~~~~~~a-i~~~~~~-~~~v~~~~-~~~g~--~~~~~~~~vP~~ig~~Gv~~i~~~~~L~~~e  296 (326)
T 1smk_A          222 VEAKAGAGSATLSMAYAAVKFADA-CLRGLRG-DAGVIECA-FVSSQ--VTELPFFASKVRLGRNGIEEVYSLGPLNEYE  296 (326)
T ss_dssp             HHHTTTSCCCCHHHHHHHHHHHHH-HHHHHHT-CSCEEEEE-EEECC--SSSSSEEEEEEEEETTEEEEECCCCCCCHHH
T ss_pred             HhcccCCCCcHHHHHHHHHHHHHH-HHHHhCC-CCeEEEEE-eeccc--cCCceEEEEEEEEeCCeeEEEcCCCCCCHHH
Confidence            9977 2 23446667788887443 3   455 78999998 78887  4678999999997 99999998757999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhh
Q 020022          310 RKKLDLTAEELSEEKALAYSCL  331 (332)
Q Consensus       310 ~~~l~~s~~~i~~~~~~~~~~~  331 (332)
                      +++|++|++.|+++++.+.+|.
T Consensus       297 ~~~l~~s~~~l~~~~~~~~~~~  318 (326)
T 1smk_A          297 RIGLEKAKKELAGSIEKGVSFI  318 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999884

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=1.5e-52  Score=390.06  Aligned_cols=301  Identities=19%  Similarity=0.287  Sum_probs=261.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~aDi   84 (332)
                      |||+||| +|.+|++++..|+..+..+     +|+|+|+++  +++++...++.+..... ..++.. ++ ++++++||+
T Consensus         1 mkI~VIG-aG~~G~~la~~l~~~g~~~-----~V~l~D~~~--~~~~~~~~~l~~~~~~~~~~~i~~-~d-~~~~~~aDv   70 (319)
T 1a5z_A            1 MKIGIVG-LGRVGSSTAFALLMKGFAR-----EMVLIDVDK--KRAEGDALDLIHGTPFTRRANIYA-GD-YADLKGSDV   70 (319)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCS-----EEEEECSSH--HHHHHHHHHHHHHGGGSCCCEEEE-CC-GGGGTTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCC-----eEEEEeCCh--HHHHHHHHHHHhhhhhcCCcEEEe-CC-HHHhCCCCE
Confidence            5899999 5999999999999877544     899999984  66777777877754211 123333 34 688999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHHH
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNR  163 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r  163 (332)
                      ||++++.+++++++|.|++.+|+++++++++.|.+++ |++++|++|||+++++++++++ +++|++|+ +.+|.||+.|
T Consensus        71 Viiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~~~~~~~~~-~~~~~~rviG~~t~ld~~r  148 (319)
T 1a5z_A           71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDVLTYFFLKE-SGMDPRKVFGSGTVLDTAR  148 (319)
T ss_dssp             EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHH-HTCCTTTEEECTTHHHHHH
T ss_pred             EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHHHHHHHHHHH-hCCChhhEEeeCccHHHHH
Confidence            9999999999999999999999999999999999998 6899999999999999999988 58898885 6669999999


Q ss_pred             HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcc-cc---hhHHHHHHHhhHHHHHHhc
Q 020022          164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDA-WL---NGEFITTVQQRGAAIIKAR  239 (332)
Q Consensus       164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~-~~---~~~~~~~v~~~~~~i~~~k  239 (332)
                      +++++|+++|++|.+|+.+ |||+||++++|+||++++    +|.|+.+++.... |.   .+++.+.++++++++++.|
T Consensus       149 ~~~~la~~lgv~~~~v~~~-v~G~hg~~~~p~~s~~~v----~G~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k  223 (319)
T 1a5z_A          149 LRTLIAQHCGFSPRSVHVY-VIGEHGDSEVPVWSGAMI----GGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEIIERK  223 (319)
T ss_dssp             HHHHHHHHHTCCGGGEECC-EEBCSSTTCEECGGGCEE----TTEEHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCcCHHHceEE-EEeCCCCCcccchhhceE----CCEEHHHHhhcccccCHHHHHHHHHHHHHhhhhhhccC
Confidence            9999999999999999977 589999999999999999    9999998864322 32   3578889999999999999


Q ss_pred             CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      |.+++. .|.++++++.+ |.+| ++.++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++
T Consensus       224 g~~~~~-~a~a~~~~~~a-i~~~-~~~~~~~~~~~~g~~g~-~~~~~~vP~~vg~~Gv~~i~~-~~L~~~e~~~l~~s~~  298 (319)
T 1a5z_A          224 GATHYA-IALAVADIVES-IFFD-EKRVLTLSVYLEDYLGV-KDLCISVPVTLGKHGVERILE-LNLNEEELEAFRKSAS  298 (319)
T ss_dssp             SCCCHH-HHHHHHHHHHH-HHTT-CCEEEEEEEEESSBTTB-CSEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHH
T ss_pred             CchHHH-HHHHHHHHHHH-HHhC-CCCEEEEEEEecCccCc-cceEEEEEEEEeCCceEEEec-CCCCHHHHHHHHHHHH
Confidence            977654 46789998776 5666 89999999999999999 89999999997 999999998 8999999999999999


Q ss_pred             HHHHHHHHHh
Q 020022          319 ELSEEKALAY  328 (332)
Q Consensus       319 ~i~~~~~~~~  328 (332)
                      .|++.++.+.
T Consensus       299 ~l~~~~~~~~  308 (319)
T 1a5z_A          299 ILKNAINEIT  308 (319)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            9999998763

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=100.00  E-value=3.9e-49  Score=366.90  Aligned_cols=305  Identities=18%  Similarity=0.325  Sum_probs=260.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~a   78 (332)
                      |++ ++||+||| +|.+|+.++..|+..++.      +|+|+|+++  +++++..+|+.+...  ....++..+++. ++
T Consensus         1 M~~-~~kI~VIG-aG~~G~~ia~~la~~g~~------~V~l~D~~~--~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a   69 (317)
T 2ewd_A            1 MIE-RRKIAVIG-SGQIGGNIAYIVGKDNLA------DVVLFDIAE--GIPQGKALDITHSMVMFGSTSKVIGTDDY-AD   69 (317)
T ss_dssp             CCC-CCEEEEEC-CSHHHHHHHHHHHHHTCC------EEEEECSSS--SHHHHHHHHHHHHHHHHTCCCCEEEESCG-GG
T ss_pred             CCC-CCEEEEEC-CCHHHHHHHHHHHhCCCc------eEEEEeCCc--hHHHHHHHHHHhhhhhcCCCcEEEECCCH-HH
Confidence            643 47999999 599999999999987642      699999985  667776778776532  123456666666 89


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE-ec
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC-LT  157 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~-~t  157 (332)
                      +++||+||+++|.|+++|++|.|++.+|.++++++++.|.+++ |+++++++|||++++++.+++. +++|++|+.| +|
T Consensus        70 ~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~~~~~~~~~~~-~~~~~~rviG~~t  147 (317)
T 2ewd_A           70 ISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPLDVMVSHFQKV-SGLPHNKVCGMAG  147 (317)
T ss_dssp             GTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHHHHHHHHHH-HCCCGGGEEESCH
T ss_pred             hCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHHHh-hCCCHHHEEeccC
Confidence            9999999999999999999999999999999999999999998 5899999999999999999997 6888888645 58


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc---hhHHHHHHHhhHHH
Q 020022          158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL---NGEFITTVQQRGAA  234 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~---~~~~~~~v~~~~~~  234 (332)
                      .+|+.|+++++++++|+++.+++++ |+|+||++++|+||++++    +|.|+.+++.+.-+.   .+++.+.++.++++
T Consensus       148 ~ld~~r~~~~la~~lg~~~~~v~~~-v~g~Hg~~~~~~~~~a~v----~g~~~~~~~~~g~~~~~~id~~~~~~~~~~~e  222 (317)
T 2ewd_A          148 VLDSSRFRTFIAQHFGVNASDVSAN-VIGGHGDGMVPATSSVSV----GGVPLSSFIKQGLITQEQIDEIVCHTRIAWKE  222 (317)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEE----TTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhCcChhhceEE-EEecCCCceeEEeecccc----CCEEHHHHHhccCCCHHHHHHHHHHHHhhHHH
Confidence            9999999999999999999999988 489999999999999999    999998876432111   24566667788999


Q ss_pred             HHH--hcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHH
Q 020022          235 IIK--ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRK  311 (332)
Q Consensus       235 i~~--~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~  311 (332)
                      +++  ++|. .++++|.++++++.+ |.+| +++++|++++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|++
T Consensus       223 i~~~~g~g~-~~~~~a~a~~~~~~a-i~~~-~~~~~~~~~~~~G~~g~-~~~~~~~P~~i~~~Gv~~i~~-~~l~~~e~~  297 (317)
T 2ewd_A          223 VADNLKTGT-AYFAPAAAAVKMAEA-YLKD-KKAVVPCSAFCSNHYGV-KGIYMGVPTIIGKNGVEDILE-LDLTPLEQK  297 (317)
T ss_dssp             HHHHHSSSC-CCHHHHHHHHHHHHH-HHTT-CCEEEEEEEEESSSTTC-SSEEEEEEEEEETTEEEEECC-CCCCHHHHH
T ss_pred             HHHhhcCCc-hHHHHHHHHHHHHHH-HHcC-CCeEEEEEEEecCccCC-cceEEEeEEEEcCCeeEEecC-CCCCHHHHH
Confidence            999  4554 455667788997776 5566 78999999999999999 89999999997 999999998 899999999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 020022          312 KLDLTAEELSEEKALAY  328 (332)
Q Consensus       312 ~l~~s~~~i~~~~~~~~  328 (332)
                      +|++|++.|++.++.+.
T Consensus       298 ~l~~s~~~l~~~~~~~~  314 (317)
T 2ewd_A          298 LLGESINEVNTISKVLD  314 (317)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999998764

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=2.1e-49  Score=367.49  Aligned_cols=298  Identities=16%  Similarity=0.216  Sum_probs=252.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~~~~al~~aDi   84 (332)
                      |||+||| +|.+|++++..|+..++..     +|+|+|++  ++++++.+.++.|.......++.. +++. +++++||+
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~-----~V~l~d~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDv   72 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVAD-----DYVFIDAN--EAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADV   72 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCS-----EEEEECSS--HHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCC-----EEEEEcCC--HHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCE
Confidence            6999999 6999999999999887522     89999998  467777777887664322223444 4555 88999999


Q ss_pred             EEEeCCCCCC----CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEe-chH
Q 020022           85 AVMVGGFPRK----EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRL  159 (332)
Q Consensus        85 Vi~~ag~~~~----~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~-t~l  159 (332)
                      ||++++.+++    ++++|.+++.+|+++++++++.+.+++ |+++++++|||+++++++++++ +++|+++++|. |.+
T Consensus        73 Viiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~~~~~~~~~-~~~~~~rvig~gt~l  150 (309)
T 1hyh_A           73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDVITALFQHV-TGFPAHKVIGTGTLL  150 (309)
T ss_dssp             EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHH
T ss_pred             EEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHHHHHHHHHHh-cCCCHHHEeecCccc
Confidence            9999999988    999999999999999999999999998 5789999999999999999998 68999996555 999


Q ss_pred             HHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhh--hhhcccchhHHHHHHHhhHHHHHH
Q 020022          160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVREL--VKDDAWLNGEFITTVQQRGAAIIK  237 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~--~~~~~~~~~~~~~~v~~~~~~i~~  237 (332)
                      |+.|+++.+++.+++++.+++.+ +||+||++++|+||++++    +|.|+.++  +.++.|  +++.++++++++++++
T Consensus       151 d~~r~~~~~a~~l~~~~~~v~~~-v~G~hg~~~~~~~s~~~v----~g~~~~~~~~~~~~~~--~~~~~~v~~~g~~ii~  223 (309)
T 1hyh_A          151 DTARMQRAVGEAFDLDPRSVSGY-NLGEHGNSQFVAWSTVRV----MGQPIVTLADAGDIDL--AAIEEEARKGGFTVLN  223 (309)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCBCC-EEBCTTTTCEECTTTCEE----TTEEGGGC-----CCH--HHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhCCChhheEEE-EEeCCCCcEeeccccceE----CCEEHHHhccCCHHHH--HHHHHHHHHhHHHHHh
Confidence            99999999999999999999976 589999999999999999    99999887  344455  6899999999999999


Q ss_pred             hcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHH
Q 020022          238 ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLT  316 (332)
Q Consensus       238 ~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s  316 (332)
                      .||.+.+ +.|.++++++.+ |..| ++.++|+|++++|     .|+|+|+||++ ++|++++++ ++|+++|+++|++|
T Consensus       224 ~kg~~~~-~~a~a~~~~~~a-i~~~-~~~~~~~~~~~~g-----~~~~~~vP~~i~~~Gv~~i~~-~~l~~~e~~~l~~s  294 (309)
T 1hyh_A          224 GKGYTSY-GVATSAIRIAKA-VMAD-AHAELVVSNRRDD-----MGMYLSYPAIIGRDGVLAETT-LDLTTDEQEKLLQS  294 (309)
T ss_dssp             HHSSCCH-HHHHHHHHHHHH-HHTT-CCEEEEEEEECTT-----TCSEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHH
T ss_pred             ccCCchH-HHHHHHHHHHHH-HHcC-CCcEEEEEEEECC-----CCeEEEEEEEEeCCceEEEeC-CCCCHHHHHHHHHH
Confidence            9997554 556788997776 5666 7899999999998     57899999997 999999998 89999999999999


Q ss_pred             HHHHHHHHHHHhhh
Q 020022          317 AEELSEEKALAYSC  330 (332)
Q Consensus       317 ~~~i~~~~~~~~~~  330 (332)
                      ++.|++.++.+.+-
T Consensus       295 ~~~l~~~~~~~~~~  308 (309)
T 1hyh_A          295 RDYIQQRFDEIVDT  308 (309)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhhh
Confidence            99999999987653

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=100.00  E-value=8.7e-43  Score=324.17  Aligned_cols=303  Identities=22%  Similarity=0.307  Sum_probs=255.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~a   82 (332)
                      ++|||+||| +|.+|+.++..|+..+.++     +|+|+|+++  +++++.++|+.+..... ..++..+++ ++++++|
T Consensus         6 ~~mkI~IiG-aG~vG~~~a~~l~~~g~~~-----~V~l~d~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~a   76 (319)
T 1lld_A            6 KPTKLAVIG-AGAVGSTLAFAAAQRGIAR-----EIVLEDIAK--ERVEAEVLDMQHGSSFYPTVSIDGSDD-PEICRDA   76 (319)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCCS-----EEEEECSSH--HHHHHHHHHHHHTGGGSTTCEEEEESC-GGGGTTC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCC-----EEEEEeCCh--hHHHHHHHHHHhhhhhcCCeEEEeCCC-HHHhCCC
Confidence            457999999 5999999999999887544     799999983  56666677777654211 223444434 5789999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHH
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDH  161 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds  161 (332)
                      |+||++++.++++|++|.+++.+|+++++++++.+.+++ |+++|++++||++.++++++++ +++|++++ +++|.+++
T Consensus        77 D~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~-~~~~vi~~~Np~~~~~~~~~~~-~~~~~~~vig~~~~l~~  154 (319)
T 1lld_A           77 DMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVA-PNAIYMLITNPVDIATHVAQKL-TGLPENQIFGSGTNLDS  154 (319)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHHHHHHHHHH-HTCCTTSEEECTTHHHH
T ss_pred             CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEecCchHHHHHHHHHh-cCCCHHHEeeccccHhH
Confidence            999999999999999999999999999999999999997 6789999999999999999887 67888885 55699999


Q ss_pred             HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc------hhHHHHHHHhhHHHH
Q 020022          162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL------NGEFITTVQQRGAAI  235 (332)
Q Consensus       162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~------~~~~~~~v~~~~~~i  235 (332)
                      .|++..+++++++++.+++.++ ||+||++++|+||++.+    ++.|+..++....|.      ..++.+.+++.+++|
T Consensus       155 ~r~~~~~a~~~~v~~~~v~~~~-~G~~g~~~~~~w~k~~i----n~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~v  229 (319)
T 1lld_A          155 ARLRFLIAQQTGVNVKNVHAYI-AGEHGDSEVPLWESATI----GGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKI  229 (319)
T ss_dssp             HHHHHHHHHHHTCCGGGEECCE-EBSSSTTCEECTTSCEE----TTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHeEEEE-EeCCCCceeeeeecceE----CCccHHHHHhccccccCCHHHHHHHHHHHHHhhHhh
Confidence            9999999999999999999775 89999999999999999    788888775332221      256778888899999


Q ss_pred             HHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       236 ~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                      ++.+|.+.+. .+.+..+++.+ +..+ .+.++++|++++|+|+. .+.++|+||.+ ++|++++++ ++|+++|+++|+
T Consensus       230 ~~~~G~~~~~-~a~~~~sm~~d-i~~~-~~~ei~~s~~~~G~~~~-~~~~~gvp~~~~~~Gv~~i~~-~~l~~~e~~~l~  304 (319)
T 1lld_A          230 INGKGATNYA-IGMSGVDIIEA-VLHD-TNRILPVSSMLKDFHGI-SDICMSVPTLLNRQGVNNTIN-TPVSDKELAALK  304 (319)
T ss_dssp             HTSCCSCCHH-HHHHHHHHHHH-HHTT-CCEEEEEEEECSSBTTB-CSSEEEEEEEEETTEEECCSC-CCCCHHHHHHHH
T ss_pred             hhCCCCchHH-HHHHHHHHHHH-HHcC-CCcEEEEEEEecCcCCc-cceEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHH
Confidence            9999976544 45577887777 5555 78999999999999998 89999999987 999999998 899999999999


Q ss_pred             HHHHHHHHHHHHH
Q 020022          315 LTAEELSEEKALA  327 (332)
Q Consensus       315 ~s~~~i~~~~~~~  327 (332)
                      +|++.|++.++.+
T Consensus       305 ~s~~~l~~~~~~~  317 (319)
T 1lld_A          305 RSAETLKETAAQF  317 (319)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998753

>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A

Probab=100.00  E-value=4.9e-43  Score=335.13  Aligned_cols=302  Identities=14%  Similarity=0.132  Sum_probs=232.2

Q ss_pred             CcEEEEEcCCCch-HHHHHHHHHh--ccc-CCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            5 PVRVLVTGAAGQI-GYALVPMIAR--GVM-LGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         5 ~~kI~IiGa~G~v-G~~la~~l~~--~~~-~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      ++||+|||| |++ +..++..|+.  .++ .+     ||+|+|+++  +++++ +.|+.+.......+++.+++.++|++
T Consensus         2 ~~KI~IIGa-G~v~~~~l~~~l~~~~~~l~~~-----el~L~Di~~--~~~~~-~~~~~~~~~~~~~~v~~t~d~~~al~   72 (417)
T 1up7_A            2 HMRIAVIGG-GSSYTPELVKGLLDISEDVRID-----EVIFYDIDE--EKQKI-VVDFVKRLVKDRFKVLISDTFEGAVV   72 (417)
T ss_dssp             CCEEEEETT-TCTTHHHHHHHHHHHTTTSCCC-----EEEEECSCH--HHHHH-HHHHHHHHHTTSSEEEECSSHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHhcccCCCcC-----EEEEEeCCH--HHHHH-HHHHHHHHhhCCeEEEEeCCHHHHhC
Confidence            579999995 765 2233445555  444 33     899999984  66765 67776643221245666677779999


Q ss_pred             CCcEEEEeCCCCCCCCCCHHH--------------------HHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           81 GVNIAVMVGGFPRKEGMERKD--------------------VMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~--------------------~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                      |||+||+++|++++++++|++                    ++.+|+++++++++.|+++|  +||+|++|||+|++|++
T Consensus        73 ~AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin~TNPvdi~t~a  150 (417)
T 1up7_A           73 DAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NATIVNFTNPSGHITEF  150 (417)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEECSSSHHHHHHH
T ss_pred             CCCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEEEEEeCChHHHHHHH
Confidence            999999999999888887753                    35899999999999999998  69999999999999999


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-----------ccCCceeecCCce---eEecCCC
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-----------NHSSSQYPDVNHA---TVNTAAG  206 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-----------~hg~~~v~~~S~~---~v~~~~~  206 (332)
                      +++++   |.+|++|.|... .|+++.+|+.+|+++++|+.++ +|           +||++++|.||..   ++.+. .
T Consensus       151 ~~k~~---p~~rviG~c~~~-~r~~~~la~~lgv~~~~v~~~v-~GlNH~~w~~~~~~hG~d~~p~~~~~~~~~~~~~-~  224 (417)
T 1up7_A          151 VRNYL---EYEKFIGLCNVP-INFIREIAEMFSARLEDVFLKY-YGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNI-P  224 (417)
T ss_dssp             HHHTT---CCSSEEECCSHH-HHHHHHHHHHTTCCGGGEEEEE-EEETTEEEEEEEEETTEECHHHHHHHHTTC---C-C
T ss_pred             HHHhC---CCCCEEEeCCCH-HHHHHHHHHHhCCCHHHCeEEE-EeecceeeEEEeecCCcEehhhHHHHHHHhhCCC-c
Confidence            99983   766866665554 4999999999999999999775 79           9999999999996   66110 1


Q ss_pred             Ccchh-hhhh----------------hcc---c----chhHHHHHHHhhHHHHH----------HhcCccchHHHHHHHH
Q 020022          207 EKPVR-ELVK----------------DDA---W----LNGEFITTVQQRGAAII----------KARKLSSALSAASSAC  252 (332)
Q Consensus       207 g~~~~-~~~~----------------~~~---~----~~~~~~~~v~~~~~~i~----------~~kg~~~~~~~a~~~~  252 (332)
                      +.|+. ++++                ++.   |    .+.+..+++++.+++++          +.||++ ++  +.+++
T Consensus       225 ~~~~~~~~~~~~g~~p~~y~~~y~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~~~~~~~~~l~~kg~t-~~--~~~a~  301 (417)
T 1up7_A          225 DEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGS-MY--STAAA  301 (417)
T ss_dssp             TTSCCHHHHHHHCSEECGGGHHHHTHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTCSSCCGGGGGSTTT-TH--HHHHH
T ss_pred             CCchHHHHHHhcCCCccchhhhccCCHHHHHhccccchHHHHHHHHHHHHHHHHHhhcccchhhhhcCCc-HH--HHHHH
Confidence            26662 2221                010   0    01222466777789998          455644 33  34678


Q ss_pred             HHHHHHHcCCCCceEEEeeeecCCCC-CCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 020022          253 DHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYS  329 (332)
Q Consensus       253 ~~i~~~i~~~~~~~i~~~sv~~~g~y-gi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~~  329 (332)
                      +++. +|.+| +++++|+|++++|+| |+|.|+++++||++ ++|++++.. .+|+++|+++++.++...+..++++.+
T Consensus       302 ~ii~-AI~~d-~~~~~~vsv~n~G~i~~lp~d~~vevP~~vg~~Gi~~i~~-~~L~~~e~~~l~~~~~~e~l~veA~~~  377 (417)
T 1up7_A          302 HLIR-DLETD-EGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQ-GKGDHFALSFIHAVKMYERLTIEAYLK  377 (417)
T ss_dssp             HHHH-HHHSS-SCEEEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHH-HHHcC-CCeEEEEEEecCCccCCCCCCeEEEEeEEEeCCceEEeec-CCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8665 58888 899999999999999 79999999999987 999999998 899999999999999999888877653

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2

Probab=100.00  E-value=3.2e-43  Score=339.46  Aligned_cols=310  Identities=14%  Similarity=0.134  Sum_probs=231.2

Q ss_pred             CCCCCcEEEEEcCCCch-HHHHHHHHHh--ccc-CCCCCceEEEEEeCCCchhhhhhhHHHHhhhh---cCCccceEeeC
Q 020022            1 MAKEPVRVLVTGAAGQI-GYALVPMIAR--GVM-LGTDQPVILHMLDIPPAAEALNGVKMELVDAA---FPLLKGVVATT   73 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~v-G~~la~~l~~--~~~-~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~---~~~~~~~~~~~   73 (332)
                      |++ ++||+|||| |++ |.+++..|+.  .++ .+     ||+|+|+++..+++++. .|+.+..   .....+++.++
T Consensus         4 m~~-~~KIaVIGa-Gsv~~~al~~~L~~~~~~l~~~-----ev~L~Di~~~~e~~~~~-~~~~~~~~~~~~~~~~i~~t~   75 (450)
T 1s6y_A            4 MDK-RLKIATIGG-GSSYTPELVEGLIKRYHELPVG-----ELWLVDIPEGKEKLEIV-GALAKRMVEKAGVPIEIHLTL   75 (450)
T ss_dssp             ----CEEEEEETT-TCTTHHHHHHHHHHTTTTCCEE-----EEEEECCGGGHHHHHHH-HHHHHHHHHHTTCCCEEEEES
T ss_pred             ccC-CCEEEEECC-CHHHHHHHHHHHHcCCCCCCCC-----EEEEEEcCCChHHHHHH-HHHHHHHHhhcCCCcEEEEeC
Confidence            433 679999994 877 7777777776  333 22     89999998422666653 3554432   22345677778


Q ss_pred             ChhhhcCCCcEEEEeCCCCCCCCCCHHHH--------------------HHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           74 DAVEACTGVNIAVMVGGFPRKEGMERKDV--------------------MSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        74 ~~~~al~~aDiVi~~ag~~~~~~~~r~~~--------------------~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      |.++|++|||+||+++|.+++++++|+++                    +.+|+++++++++.|+++| |++|+|++|||
T Consensus        76 D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ii~~tNP  154 (450)
T 1s6y_A           76 DRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLINFTNP  154 (450)
T ss_dssp             CHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSS
T ss_pred             CHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCc
Confidence            88899999999999999999888888744                    7899999999999999999 68999999999


Q ss_pred             ccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-----------ccCCceeecCCceeEe
Q 020022          134 ANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-----------NHSSSQYPDVNHATVN  202 (332)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-----------~hg~~~v~~~S~~~v~  202 (332)
                      +|++|+++++++   |.+|++|.|... .|+++++|+.+|+++++|+.++ +|           +||++++|.||...+.
T Consensus       155 vdivT~a~~k~~---p~~rViG~c~~~-~r~~~~la~~lgv~~~~v~~~v-~GlNH~~w~~~v~~~G~d~~p~~~~~~~~  229 (450)
T 1s6y_A          155 AGMVTEAVLRYT---KQEKVVGLCNVP-IGMRMGVAKLLGVDADRVHIDF-AGLNHMVFGLHVYLDGVEVTEKVIDLVAH  229 (450)
T ss_dssp             HHHHHHHHHHHC---CCCCEEECCSHH-HHHHHHHHHHHTSCGGGEEEEE-EEETTEEEEEEEEETTEECHHHHHHHHSC
T ss_pred             HHHHHHHHHHhC---CCCCEEEeCCcH-HHHHHHHHHHhCCCHHHcEEEE-EeeecceeEEEeeeCCcCchHhHHHHHhh
Confidence            999999999983   766876666665 4999999999999999999775 79           9999999999985440


Q ss_pred             ----c-C-C--CCcchh------------hhhh-----hc---cc--------chhHHHHHHHhhHHHHH-----HhcC-
Q 020022          203 ----T-A-A--GEKPVR------------ELVK-----DD---AW--------LNGEFITTVQQRGAAII-----KARK-  240 (332)
Q Consensus       203 ----~-~-~--~g~~~~------------~~~~-----~~---~~--------~~~~~~~~v~~~~~~i~-----~~kg-  240 (332)
                          + . .  .+.|+.            +++.     ++   .|        .+.++.+++++.+++++     +.|+ 
T Consensus       230 ~~~~g~~~~~~~~~~~~~~~~~~~g~~p~~y~~yy~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ei~~~~~~~~k~~  309 (450)
T 1s6y_A          230 PDRSGVTMKNIVDLGWEPDFLKGLKVLPCPYHRYYFQTDKMLAEELEAAKTKGTRAEVVQQLEKELFELYKDPNLAIKPP  309 (450)
T ss_dssp             C------------CCCCHHHHHHHCSBCCGGGHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTCC-------
T ss_pred             hccccccccccccCccHHHHHHhcCCccchhhhhhcCCHHHHHhhhccccccchHHHHHHHHHHHHHHHHhhhccccccc
Confidence                0 0 0  012331            1110     11   00        12355666777888888     5443 


Q ss_pred             ----ccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCC-CCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          241 ----LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       241 ----~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~y-gi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                          +++++. +.++++++. +|.+| +++++++||+++|+| |+|.|+++++||++ ++|++++.. .+|+++|+++++
T Consensus       310 ~~~~~~~~~~-~~~a~~ii~-AI~~d-~~~~~~vsv~n~G~i~~lp~d~~vevP~vvg~~Gi~~i~~-~~L~~~e~~l~~  385 (450)
T 1s6y_A          310 QLEKRGGAYY-SDAACSLIS-SIYND-KRDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAV-GDLPVAVRGLVQ  385 (450)
T ss_dssp             ----CCSCCH-HHHHHHHHH-HHHHT-CCCEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHH
T ss_pred             hhhcccchHH-HHHHHHHHH-HHHcC-CCeEEEEEeecCceecCCCCCeEEEEeEEEcCCCeEEeec-CCCCHHHHHHHH
Confidence                333232 246788665 47777 899999999999998 79999999999987 999999998 899999999999


Q ss_pred             HHHHHHHHHHHHHh
Q 020022          315 LTAEELSEEKALAY  328 (332)
Q Consensus       315 ~s~~~i~~~~~~~~  328 (332)
                      .++..-+-.++++.
T Consensus       386 ~~~~~e~l~veAa~  399 (450)
T 1s6y_A          386 QIKSFERVAAEAAV  399 (450)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            98876665555543

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=100.00  E-value=5.6e-41  Score=325.00  Aligned_cols=308  Identities=16%  Similarity=0.168  Sum_probs=222.3

Q ss_pred             CCCCCcEEEEEcCCCch-HHHHHHHHHhc--cc-CCCCCceEEEEEeCCCchhhhhhhHHHHhhhh---cCCccceEeeC
Q 020022            1 MAKEPVRVLVTGAAGQI-GYALVPMIARG--VM-LGTDQPVILHMLDIPPAAEALNGVKMELVDAA---FPLLKGVVATT   73 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~v-G~~la~~l~~~--~~-~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~---~~~~~~~~~~~   73 (332)
                      |.|+++||+||| +|++ |.+++..|+..  ++ .+     +|+|+|+++  +++++. .|+.+..   .....+++.++
T Consensus        24 m~m~~~KIaVIG-aGsv~~~ala~~L~~~~~~l~~~-----eV~L~Di~~--e~~~~~-~~~~~~~l~~~~~~~~I~~t~   94 (472)
T 1u8x_X           24 MKKKSFSIVIAG-GGSTFTPGIVLMLLDHLEEFPIR-----KLKLYDNDK--ERQDRI-AGACDVFIREKAPDIEFAATT   94 (472)
T ss_dssp             --CCCEEEEEEC-TTSSSHHHHHHHHHHTTTTSCEE-----EEEEECSCH--HHHHHH-HHHHHHHHHHHCTTSEEEEES
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHhCCCCCCCC-----EEEEEeCCH--HHHHHH-HHHHHHHhccCCCCCEEEEEC
Confidence            434457999999 5887 55677777776  43 22     899999984  667663 4665533   13345777788


Q ss_pred             ChhhhcCCCcEEEEeCCCCCCCCCCHHHH--------------------HHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           74 DAVEACTGVNIAVMVGGFPRKEGMERKDV--------------------MSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        74 ~~~~al~~aDiVi~~ag~~~~~~~~r~~~--------------------~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      |.++|++|||+||+++|.+++++++|+++                    +.+|+++++++++.|+++| |+||+|++|||
T Consensus        95 D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~~TNP  173 (472)
T 1u8x_X           95 DPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNP  173 (472)
T ss_dssp             CHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSC
T ss_pred             CHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCc
Confidence            88899999999999999988887777555                    7899999999999999999 68999999999


Q ss_pred             ccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCC-CCeeeeEEEe-----------c-cCCceeecCCcee
Q 020022          134 ANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQV-SDVKNVIIWG-----------N-HSSSQYPDVNHAT  200 (332)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~-~~v~~~~v~G-----------~-hg~~~v~~~S~~~  200 (332)
                      +|++|+++++++   |+.|++|.|... .|+++++|+.+|+++ ++|+.++ +|           + ||++++|.||...
T Consensus       174 vdi~T~~~~k~~---p~~rViG~c~~~-~r~~~~la~~lgv~~~~~v~~~v-~GlNH~~W~~~~~~~hG~d~~p~~~~~~  248 (472)
T 1u8x_X          174 AAIVAEATRRLR---PNSKILNICDMP-VGIEDRMAQILGLSSRKEMKVRY-YGLNHFGWWTSIQDQEGNDLMPKLKEHV  248 (472)
T ss_dssp             HHHHHHHHHHHS---TTCCEEECCSHH-HHHHHHHHHHHTCSCGGGEEEEE-EEETTEEEEEEEEETTCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhC---CCCCEEEeCCcH-HHHHHHHHHHhCcCchhceeEEE-eccchhhheeeeEeCCCCEehHhHHHHH
Confidence            999999999983   766876666665 499999999999998 9999775 79           8 9999999999854


Q ss_pred             Ee-c--C-C----CCcchh-hhhh------------hcccc-----hhHHHH----------HHHh----hHHHHHH-h-
Q 020022          201 VN-T--A-A----GEKPVR-ELVK------------DDAWL-----NGEFIT----------TVQQ----RGAAIIK-A-  238 (332)
Q Consensus       201 v~-~--~-~----~g~~~~-~~~~------------~~~~~-----~~~~~~----------~v~~----~~~~i~~-~-  238 (332)
                      +. +  . +    ...|+. ++++            +.+|.     .+++.+          .+++    ..+++++ . 
T Consensus       249 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~Yl~yy~~~~~~~e~~~~~~~r~~~v~~~~~~~~~~~~~~~~  328 (472)
T 1u8x_X          249 SQYGYIPKTEAEAVEASWNDTFAKARDVQAADPDTLPNTYLQYYLFPDDMVKKSNPNHTRANEVMEGREAFIFSQCDMIT  328 (472)
T ss_dssp             HHHSSCCCC-------CTTSHHHHHHHHHHTSTTSEECGGGHHHHSHHHHHTTSCSSSCHHHHHHHHTTTTTTTTHHHHH
T ss_pred             HhcCCCccccccccccchHHHHHhhcCccccccccCCccchhcccCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhh
Confidence            30 0  0 0    001221 1110            01100     011111          1112    2223332 3 


Q ss_pred             -cC------ccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCC-CCCCceEEEEeeEe-cCCcEEEecCCCCCHHH
Q 020022          239 -RK------LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFS  309 (332)
Q Consensus       239 -kg------~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~y-gi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E  309 (332)
                       |+      .+...+ +.++++++. +|.+| +++++|+||+++|+| |+|.|+++++||++ ++|++++.. .+|+++|
T Consensus       329 ~~~~~~~~~~~~~~~-~~~a~~ii~-AI~~d-~~~v~~vsv~n~G~i~glp~d~~veVP~vvg~~Gi~pi~~-~~Lp~~~  404 (472)
T 1u8x_X          329 REQSSENSEIKIDDH-ASYIVDLAR-AIAYN-TGERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITV-GTIPQFQ  404 (472)
T ss_dssp             HHTSCCSCSSCCCTT-THHHHHHHH-HHHHT-CCEEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHH
T ss_pred             hcCCcccccccccHH-HHHHHHHHH-HHhcC-CCeEEEEEeecCceecCcCCCeEEEEeEEEcCCCceEeec-CCCCHHH
Confidence             44      222233 446788665 47777 899999999999998 79999999999987 999999998 8999999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 020022          310 RKKLDLTAEELSEEKALA  327 (332)
Q Consensus       310 ~~~l~~s~~~i~~~~~~~  327 (332)
                      +++++.-...-+-.++++
T Consensus       405 ~~l~~~~~~~e~l~veAa  422 (472)
T 1u8x_X          405 KGLMEQQVSVEKLTVEAW  422 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999987655444444443

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}

Probab=100.00  E-value=4.6e-34  Score=274.34  Aligned_cols=302  Identities=14%  Similarity=0.168  Sum_probs=213.0

Q ss_pred             CCCCCcEEEEEcCCCchH--HHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            1 MAKEPVRVLVTGAAGQIG--YALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG--~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      |+|+.+||+||| +|++|  ..++..|+....+.   . +|+|+|+++  ++++....-..... ....+++.++|.++|
T Consensus         1 m~m~~~KIaVIG-aGs~g~g~~la~~l~~~~~~~---g-eV~L~Di~~--e~le~~~~~~~~l~-~~~~~I~~TtD~~eA   72 (450)
T 3fef_A            1 MSLDQIKIAYIG-GGSQGWARSLMSDLSIDERMS---G-TVALYDLDF--EAAQKNEVIGNHSG-NGRWRYEAVSTLKKA   72 (450)
T ss_dssp             --CCCEEEEEET-TTCSSHHHHHHHHHHHCSSCC---E-EEEEECSSH--HHHHHHHHHHTTST-TSCEEEEEESSHHHH
T ss_pred             CCCCCCEEEEEC-CChhHhHHHHHHHHHhccccC---C-eEEEEeCCH--HHHHHHHHHHHHHh-ccCCeEEEECCHHHH
Confidence            777889999999 59974  57877777533211   1 899999985  44432111011111 134578888999999


Q ss_pred             cCCCcEEEEeCC------------CCCCCCCCHH--H--------HHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           79 CTGVNIAVMVGG------------FPRKEGMERK--D--------VMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        79 l~~aDiVi~~ag------------~~~~~~~~r~--~--------~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      ++|||+||++.+            +|+++|..+.  |        ...+|+++++++++.|+++| |++|+|++|||+|+
T Consensus        73 l~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~-p~a~~i~~tNPvdi  151 (450)
T 3fef_A           73 LSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYA-PESWVINYTNPMSV  151 (450)
T ss_dssp             HTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHH
T ss_pred             hcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHC-CCeEEEEecCchHH
Confidence            999999999985            5778887554  3        34599999999999999999 68999999999999


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHc----C---CCCCCeeeeEEEe-ccCCceeecCCceeEecCCCCc
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKL----N---VQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEK  208 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l----~---v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~  208 (332)
                      +|+++++.   +|+.|++|.|+.. .++++.+|+.+    |   +++++|+..+ .| ||    +.||+++++    +|.
T Consensus       152 ~t~~~~k~---~p~~rviG~C~~~-~~~~~~~a~~l~~~lg~~~~~~~~v~~~~-~GlNH----~~w~~~~~~----~G~  218 (450)
T 3fef_A          152 CTRVLYKV---FPGIKAIGCCHEV-FGTQKLLAEMVTERLGIEVPRREDIRVNV-LGINH----FTWITKASY----RHI  218 (450)
T ss_dssp             HHHHHHHH---CTTCEEEECCSHH-HHHHHHHHHHHHHHHCCCCSCGGGEEEEE-EEETT----EEEEEEEEE----TTE
T ss_pred             HHHHHHHH---CCCCCEEEeCCcH-HHHHHHHHHHHHhhcCCCCCChhHeEEEE-eeecC----eEeEEEEEE----CCE
Confidence            99999987   4777888988887 79999999999    5   7799999775 79 99    799999999    888


Q ss_pred             chhhhhhh-------c-------ccch----------hHHHHHH------------------------------------
Q 020022          209 PVRELVKD-------D-------AWLN----------GEFITTV------------------------------------  228 (332)
Q Consensus       209 ~~~~~~~~-------~-------~~~~----------~~~~~~v------------------------------------  228 (332)
                      ++...+.+       .       .|..          -++.+..                                    
T Consensus       219 d~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~ey~p~~Y~~~~~~~~~~~~~~~~r  298 (450)
T 3fef_A          219 DLLPIFREFSAHYGESGYELEGECWRDSVFCSAHRVAFDLFETYGAIPAAGDRHLAEFLPGPYLKQPEVWKFHLTPISFR  298 (450)
T ss_dssp             EHHHHHHHHHHHHTTTCCCCTTCCTTSCTTCCCSHHHHHHHHHHSSEECSCHHHHTTSSCSSGGGCTTTTTCCCCCHHHH
T ss_pred             EChHHHHHHHHhhcccccccccccccccccchhhHHHHHHHHHcCCcccccccchhcccchhhcCCHHHhcccccchhhH
Confidence            88763311       0       1110          0111111                                    


Q ss_pred             ----HhhHHHHHHh-cCccch--HHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCC-CCCCceEEEEeeEe-cCCcEEE
Q 020022          229 ----QQRGAAIIKA-RKLSSA--LSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTC-RNGEWTI  299 (332)
Q Consensus       229 ----~~~~~~i~~~-kg~~~~--~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~y-gi~~~~~~s~Pv~~-~~Gv~~~  299 (332)
                          .+...+..+. ++....  -..+.++++++. +|.+| ++.++++|+.++|.| |+|.|+++++||++ ++|+.++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ii~-aI~~d-~~~~~~vnv~n~G~i~~lp~d~~vevP~~v~~~Gi~pi  376 (450)
T 3fef_A          299 KQDRAEKRQETERLIVQQRGVAEKASGEEGVNIIA-ALLGL-GELVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPI  376 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCSCCSCCHHHHHH-HHTTS-CCEEEEEEEECSSSSTTSCTTSEEEEEEEEETTEEEEB
T ss_pred             HHHHHHHHHHHHHHhcCCcCcCcCccHHHHHHHHH-HHHcC-CCeEEEEEeecCcEecCCCCCeEEEEEEEEcCCCceec
Confidence                0000000000 000000  000123566554 58888 899999999999997 89999999999997 9999999


Q ss_pred             ecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 020022          300 VQGLSIDEFSRKKLDLTAEELSEEKALA  327 (332)
Q Consensus       300 ~~~~~l~~~E~~~l~~s~~~i~~~~~~~  327 (332)
                      .. .+|++.++++++.-...-+-.++++
T Consensus       377 ~~-g~Lp~~~~~l~~~~~~~e~l~veAa  403 (450)
T 3fef_A          377 LS-GALPKGVEMLAARHISNQEAVADAG  403 (450)
T ss_dssp             CC-CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            87 7999999998876654444444443

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=99.97  E-value=3e-30  Score=249.75  Aligned_cols=296  Identities=14%  Similarity=0.155  Sum_probs=199.2

Q ss_pred             CCcEEEEEcCCCchH--HHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh---cCCccceEeeCChhh
Q 020022            4 EPVRVLVTGAAGQIG--YALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA---FPLLKGVVATTDAVE   77 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG--~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~---~~~~~~~~~~~~~~~   77 (332)
                      +++||+||| +|+||  .+++..|+. .++.+    .+|+|+|+++  +++++. .++.+..   .....+++.+++.++
T Consensus         2 ~~~KIaVIG-AGsVg~g~ala~~La~~~~l~~----~eV~L~Di~~--e~l~~~-~~~~~~~l~~~~~~~~I~~ttD~~e   73 (480)
T 1obb_A            2 PSVKIGIIG-AGSAVFSLRLVSDLCKTPGLSG----STVTLMDIDE--ERLDAI-LTIAKKYVEEVGADLKFEKTMNLDD   73 (480)
T ss_dssp             CCCEEEEET-TTCHHHHHHHHHHHHTCGGGTT----CEEEEECSCH--HHHHHH-HHHHHHHHHHTTCCCEEEEESCHHH
T ss_pred             CCCEEEEEC-CCchHHHHHHHHHHHhcCcCCC----CEEEEEeCCH--HHHHHH-HHHHHHHhccCCCCcEEEEECCHHH
Confidence            457999999 59985  445667764 33312    1899999984  666653 3333221   223457788888889


Q ss_pred             hcCCCcEEEEeCCC------------CCCCCCCH--HH------------HHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           78 ACTGVNIAVMVGGF------------PRKEGMER--KD------------VMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        78 al~~aDiVi~~ag~------------~~~~~~~r--~~------------~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      |++|||+||+++|.            ++++|..+  .+            ++.+|+++++++++.|+++| |+||+|++|
T Consensus        74 al~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~-P~A~ii~~T  152 (480)
T 1obb_A           74 VIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS-PKAWYLQAA  152 (480)
T ss_dssp             HHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC-TTCEEEECS
T ss_pred             HhCCCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHC-CCeEEEEeC
Confidence            99999999999986            34455444  33            36899999999999999999 689999999


Q ss_pred             CcccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCCCcch
Q 020022          132 NPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPV  210 (332)
Q Consensus       132 NP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~  210 (332)
                      ||+|++|++++++    |+.|++|.|+++. ++++++ +.+|++|++|+.++ +| ||.    .||.+.+.    +|.++
T Consensus       153 NPvdi~t~~~~k~----p~~rviG~c~~~~-~~~~~l-~~lgv~~~~v~~~v-~GlNH~----~w~~~~~~----~G~D~  217 (480)
T 1obb_A          153 NPIFEGTTLVTRT----VPIKAVGFCHGHY-GVMEIV-EKLGLEEEKVDWQV-AGVNHG----IWLNRFRY----NGGNA  217 (480)
T ss_dssp             SCHHHHHHHHHHH----SCSEEEEECSGGG-HHHHHH-HHTTCCGGGEEEEE-EEETTE----EEEEEEEE----TTEEC
T ss_pred             CcHHHHHHHHHHC----CCCcEEecCCCHH-HHHHHH-HHhCCCHHHceEEE-Eeecch----hhhhheee----CCeEc
Confidence            9999999999985    6678555544443 478999 99999999999775 68 776    66666655    33322


Q ss_pred             hhhhhh----------------------------------c-------ccc------h----------------------
Q 020022          211 RELVKD----------------------------------D-------AWL------N----------------------  221 (332)
Q Consensus       211 ~~~~~~----------------------------------~-------~~~------~----------------------  221 (332)
                      ...+.+                                  .       +|.      .                      
T Consensus       218 ~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~~y~~~~~~~~~~yyy~~~~~~~~~~~~~~~~~  297 (480)
T 1obb_A          218 YPLLDKWIEEKSKDWKPENPFNDQLSPAAIDMYRFYGVMPIGDTVRNSSWRYHRDLETKKKWYGEPWGGADSEIGWKWYQ  297 (480)
T ss_dssp             HHHHHHHHHHTGGGCCCSSTTCCTTSHHHHHHHHHHSSCEEGGGTTSCCGGGGSSHHHHHHHHCTTTTSTTSHHHHHHHH
T ss_pred             HHHHHHHHHccCccccccccccchhhhHHHHHHHhcCCeecCCCCCCcCcccccccCccccccchhhcccccccccHhHH
Confidence            111100                                  0       111      0                      


Q ss_pred             ---hHHHHHHHhhHHHHHHhcC-----------ccchH---------------HHHHHHHHHHHHHHcCCCCceEEEeee
Q 020022          222 ---GEFITTVQQRGAAIIKARK-----------LSSAL---------------SAASSACDHIRDWVLGTPEGTWVSMGV  272 (332)
Q Consensus       222 ---~~~~~~v~~~~~~i~~~kg-----------~~~~~---------------~~a~~~~~~i~~~i~~~~~~~i~~~sv  272 (332)
                         .+..+...+.-+++.+...           ++++.               .....++.+|. ++.+| ++.++.++|
T Consensus       298 ~~~~e~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ge~a~~ii~-ai~~~-~~~~~~vnv  375 (480)
T 1obb_A          298 DTLGKVTEITKKVAKFIKENPSVRLSDLGSVLGKDLSEKQFVLEVEKILDPERKSGEQHIPFID-ALLND-NKARFVVNI  375 (480)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCCGGGCSSSSCCSHHHHHHHHHHHHHHCTTCCCSCSHHHHHH-HHHHC-CCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccchhhhHHHHHHHH-HHHhC-CCeEEEEEe
Confidence               0111111111223333221           11110               00123566554 47777 889999999


Q ss_pred             ecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCC-CCHHHHHH-HHHHHHHHHHHHHH
Q 020022          273 YSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLS-IDEFSRKK-LDLTAEELSEEKAL  326 (332)
Q Consensus       273 ~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~-l~~~E~~~-l~~s~~~i~~~~~~  326 (332)
                      ..+|. .|+|.|+++.+||++ ++|+.++.. .+ |++..+.+ ++.-...-+-.+++
T Consensus       376 ~N~G~I~~lp~d~vVEvp~~v~~~G~~p~~~-g~~lP~~~~~l~~~~~~~~e~l~veA  432 (480)
T 1obb_A          376 PNKGIIHGIDDDVVVEVPALVDKNGIHPEKI-EPPLPDRVVKYYLRPRIMRMEMALEA  432 (480)
T ss_dssp             ECTTSSTTSCTTSEEEEEEEEETTEEEECCC-SSCCCHHHHHHTHHHHHHHHHHHHHH
T ss_pred             eCCceeCCCCCCeEEEEEEEEcCCCCEeecc-CCCCCHHHHhHHHHHHHHHHHHHHHH
Confidence            99995 899999999999998 999999876 68 99998888 76654443333333

>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*

Probab=99.96  E-value=4.4e-28  Score=235.54  Aligned_cols=284  Identities=19%  Similarity=0.208  Sum_probs=190.3

Q ss_pred             cEEEEEcCCCchHHH--HHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhhcCC
Q 020022            6 VRVLVTGAAGQIGYA--LVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTG   81 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~--la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~al~~   81 (332)
                      |||+||| +|++|++  +...++....++. ...+|+|+|++  ++++++...++.+...  ....+++.++|.++|++|
T Consensus         1 mKI~iIG-aGs~~~t~~l~~~~~~~~~l~~-~~~ei~L~Di~--~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~g   76 (477)
T 3u95_A            1 MKISIVG-AGSVRFALQLVEDIAQTDELSR-EDTHIYLMDVH--ERRLNASYILARKYVEELNSPVKVVKTESLDEAIEG   76 (477)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHTCTTTCS-TTCEEEEECSC--HHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTT
T ss_pred             CEEEEEC-CCchhhHHHHHHHHHhhHhcCC-CCCEEEEECCC--HHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCC
Confidence            5999999 5999876  3444555433221 11289999998  4788888888877653  234577888999999999


Q ss_pred             CcEEEEeCCCC-------------------CCCCCCHHHHH---------------HhhHHHHHHHHHHHHhhcCCCeEE
Q 020022           82 VNIAVMVGGFP-------------------RKEGMERKDVM---------------SKNVSIYKAQASALEQHAAPNCKV  127 (332)
Q Consensus        82 aDiVi~~ag~~-------------------~~~~~~r~~~~---------------~~n~~i~~~i~~~i~~~~~~~~~v  127 (332)
                      |||||+++|..                   +++|++|..+.               .+|++++.++++.|+++| |+||+
T Consensus        77 AD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~-P~A~~  155 (477)
T 3u95_A           77 ADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMA-PKAYL  155 (477)
T ss_dssp             CSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHC-TTCEE
T ss_pred             CCEEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhC-CCeEE
Confidence            99999999752                   35565544432               358999999999999999 68999


Q ss_pred             EEecCcccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCC
Q 020022          128 LVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAG  206 (332)
Q Consensus       128 iv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~  206 (332)
                      |++|||++++|++++++ ++.   |+.|.|+-.  +....+++.+|+++++|+..+ .| ||-    .||..++.    +
T Consensus       156 in~tNP~~i~t~a~~~~-~~~---k~vGlC~~~--~~~~~~~~~Lg~~~~~v~~~~-~GlNH~----~w~~~~~~----~  220 (477)
T 3u95_A          156 MQTANPVFEITQAVRRW-TGA---NIIGFCHGV--AGVYEVFERLGLDPEEVDWQV-AGVNHG----IWLNRFRY----R  220 (477)
T ss_dssp             EECSSCHHHHHHHHHHH-HCC---CEEEECCGG--GHHHHHHHHTTCCGGGEEEEE-EEETTE----EEEEEEEE----T
T ss_pred             EEecChHHHHHHHHHHh-CCC---CeEEECCCH--HHHHHHHHHhCCCHHHcEEEE-eecCCC----eeeeeeee----c
Confidence            99999999999999998 453   567877644  444567788999999999765 68 663    66666666    4


Q ss_pred             Ccchhhhhhh------------cccc-----------------------------h-----------------------h
Q 020022          207 EKPVRELVKD------------DAWL-----------------------------N-----------------------G  222 (332)
Q Consensus       207 g~~~~~~~~~------------~~~~-----------------------------~-----------------------~  222 (332)
                      |.++...+.+            ..|.                             .                       .
T Consensus       221 G~D~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~r~~g~~p~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~  300 (477)
T 3u95_A          221 GKDAYPLLDEWIEKELSKWEPKNPWDTQMSPAAMDMYRFYGMLPIGDTVRNGTWKYHYNLETKKKWFRRFGGIDNEVERP  300 (477)
T ss_dssp             TEECHHHHHHHHHHHTTTCCCSSTTCCTTSHHHHHHHHHHSSCEEGGGGTSCCGGGTSSHHHHHHHHCTTCCSSSTTHHH
T ss_pred             CCcccHHHHHHHHhhcccccccCccccccchHHHHHHHHhCCcccccccccccchhhhhHHHHHHHHHHhcccchhhhhh
Confidence            4443221100            0000                             0                       0


Q ss_pred             HHHHHHHhhHH-------HHHHhcCc-----------cchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCc
Q 020022          223 EFITTVQQRGA-------AIIKARKL-----------SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAG  283 (332)
Q Consensus       223 ~~~~~v~~~~~-------~i~~~kg~-----------~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~  283 (332)
                      .+.+.++....       ++.+....           ....+ ...++++|. +|.+| ++.++.++|.++|. -++|.|
T Consensus       301 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~a~~ii~-AI~~~-~~~~~~vNv~N~G~I~nLP~D  377 (477)
T 3u95_A          301 KFHEHLRRARERLIKLAEEVQENPHLKITEKHPEIFPKGRLS-GEQHIPFIN-AIANN-KRVRLFLNVENQGALKDFPDD  377 (477)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHCTTTSCSSCCC-CCSHHHHHH-HHHHC-CCEEEEEEEECTTSSTTSCTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhccchhcccccchhccccccc-HHHHHHHHH-HHhCC-CCeEEEEEeecCcccCCCCCC
Confidence            00111111111       11111000           00000 123566554 47777 89999999999997 589999


Q ss_pred             eEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          284 LIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       284 ~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                      .++.+||++ ++|+.++.- .++......++
T Consensus       378 avVEVpc~Vd~~Gi~P~~v-g~~p~~~~~l~  407 (477)
T 3u95_A          378 LVMELPVWVDSSGIHREKV-EPDLTHRIKIF  407 (477)
T ss_dssp             SEEEEEEEEETTEEEECCC-CSCCCHHHHHH
T ss_pred             cEEEEEEEEcCCCcccccC-CCCCHHHHHHH
Confidence            999999998 999988654 46666555543

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=99.05  E-value=7.6e-10  Score=101.75  Aligned_cols=150  Identities=17%  Similarity=0.199  Sum_probs=99.8

Q ss_pred             CCCC-CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH----HHHhhh---h-c--C-----
Q 020022            1 MAKE-PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK----MELVDA---A-F--P-----   64 (332)
Q Consensus         1 m~~~-~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~----~dl~~~---~-~--~-----   64 (332)
                      |+.+ ..||+||| +|.||+.+|..++..|+       +++|+|+++  +.+..-.    ..+...   . .  .     
T Consensus         1 Ma~p~~~~VaViG-aG~MG~giA~~~a~~G~-------~V~l~D~~~--~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~   70 (319)
T 3ado_A            1 MASPAAGDVLIVG-SGLVGRSWAMLFASGGF-------RVKLYDIEP--RQITGALENIRKEMKSLQQSGSLKGSLSAEE   70 (319)
T ss_dssp             ------CEEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSCH--HHHHHHHHHHHHHHHHHHHTTCCCSSSCHHH
T ss_pred             CCCCCCCeEEEEC-CcHHHHHHHHHHHhCCC-------eEEEEECCH--HHHHHHHHHHHHHHHHHHHcCCCCCccCHHH
Confidence            6554 46999999 69999999999999875       799999985  3332111    111111   0 0  0     


Q ss_pred             CccceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           65 LLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        65 ~~~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      ...+++.++++.+++++||+||.+.              .+|+++.+++..+|+++++|++  |+.||.+.+...-++..
T Consensus        71 ~l~~i~~~~~l~~a~~~ad~ViEav--------------~E~l~iK~~lf~~l~~~~~~~a--IlaSNTSsl~is~ia~~  134 (319)
T 3ado_A           71 QLSLISSCTNLAEAVEGVVHIQECV--------------PENLDLKRKIFAQLDSIVDDRV--VLSSSSSCLLPSKLFTG  134 (319)
T ss_dssp             HHHTEEEECCHHHHTTTEEEEEECC--------------CSCHHHHHHHHHHHHTTCCSSS--EEEECCSSCCHHHHHTT
T ss_pred             HHhhcccccchHhHhccCcEEeecc--------------ccHHHHHHHHHHHHHHHhhhcc--eeehhhhhccchhhhhh
Confidence            1246778888989999999999884              4689999999999999998886  67999888644444432


Q ss_pred             CCC---------C-CCC--c---EEE--echHHHHHHHHHHHHHcCCCC
Q 020022          145 APS---------I-PAK--N---ITC--LTRLDHNRALGQISEKLNVQV  176 (332)
Q Consensus       145 ~~~---------~-~~~--~---i~~--~t~lds~r~~~~la~~l~v~~  176 (332)
                      .+.         | |+.  +   +..  .|.-++......+++.+|..|
T Consensus       135 ~~~p~r~ig~HffNP~~~m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~p  183 (319)
T 3ado_A          135 LAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSP  183 (319)
T ss_dssp             CTTGGGEEEEEECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEE
T ss_pred             ccCCCcEEEecCCCCccccchHHhcCCCCCcHHHHHHHHHHHHHhCCcc
Confidence            221         1 222  1   222  366666666677778888654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.83  E-value=4.3e-09  Score=97.64  Aligned_cols=174  Identities=13%  Similarity=0.049  Sum_probs=107.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc----CCc----cceEeeCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PLL----KGVVATTD   74 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~----~~~----~~~~~~~~   74 (332)
                      ++++||.|+||+|++|++++..|+..|.       +|+.+++....  ......++.....    ...    .++.-...
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   93 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQ-------VVIGLDNFSTG--HQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT   93 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSC--CHHHHHHHHHTSCHHHHTTEEEEECCTTCHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCCCC--chhhhhhhhhccccccCCceEEEEccCCCHHH
Confidence            4568999999999999999999998763       78999886421  1111122211100    000    01111112


Q ss_pred             hhhhcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCC
Q 020022           75 AVEACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSI  148 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~  148 (332)
                      ..++++++|+||++||.....  ..+..+.+..|+.....+++.+.+...  .++|++|... +...    .+.+. .-.
T Consensus        94 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~--~~~v~~SS~~-vyg~~~~~~~~E~-~~~  169 (351)
T 3ruf_A           94 CEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV--QSFTYAASSS-TYGDHPALPKVEE-NIG  169 (351)
T ss_dssp             HHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC--SEEEEEEEGG-GGTTCCCSSBCTT-CCC
T ss_pred             HHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEEecHH-hcCCCCCCCCccC-CCC
Confidence            456788999999999864311  123456778899999999999988763  2566665321 1000    00000 001


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      .+...++.+.....++...+++..|++..-++...|+|...
T Consensus       170 ~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          170 NPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTC
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCC
Confidence            12234677788888888888888899888888777788644

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.82  E-value=1.7e-08  Score=93.13  Aligned_cols=168  Identities=13%  Similarity=0.087  Sum_probs=96.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~aD   83 (332)
                      +|||.|+||+|++|++++..|+..|.       +|+++++++.  ...    ++.+... ....++.-.....++++++|
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~----~l~~~~~~~~~~Dl~d~~~~~~~~~~~d   79 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGH-------DLVLIHRPSS--QIQ----RLAYLEPECRVAEMLDHAGLERALRGLD   79 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECTTS--CGG----GGGGGCCEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEecChH--hhh----hhccCCeEEEEecCCCHHHHHHHHcCCC
Confidence            46999999999999999999998763       7899998742  221    1111000 00001101112456788999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH--H--HHHHhCCCCCC----CcEEE
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA--L--ILKEFAPSIPA----KNITC  155 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~--~--~~~~~~~~~~~----~~i~~  155 (332)
                      +||++||.......+..+.+..|+.....+++.+.+...  .++|++|...-.-.  .  ...+. .-..+    ...++
T Consensus        80 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~v~~SS~~~~~~~~~~~~~~E~-~~~~p~~~~~~~Y~  156 (342)
T 2x4g_A           80 GVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARV--PRILYVGSAYAMPRHPQGLPGHEG-LFYDSLPSGKSSYV  156 (342)
T ss_dssp             EEEEC------------CHHHHHHHHHHHHHHHHHHHTC--SCEEEECCGGGSCCCTTSSCBCTT-CCCSSCCTTSCHHH
T ss_pred             EEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--CeEEEECCHHhhCcCCCCCCCCCC-CCCCccccccChHH
Confidence            999999865422234556788999999999999988753  35666664321100  0  00000 00111    22456


Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      .++....++...+++. |++..-++...|+|...
T Consensus       157 ~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          157 LCKWALDEQAREQARN-GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             HHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCC
T ss_pred             HHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCC
Confidence            6677777776667766 88877778777778643

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.81  E-value=9.9e-09  Score=95.00  Aligned_cols=160  Identities=17%  Similarity=0.155  Sum_probs=104.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.+||.|+||+|++|++++..|+..|.       +|+++|+++......-...|+.+.           ....++++++|
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~Dl~d~-----------~~~~~~~~~~d   79 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGR-------TVRGFDLRPSGTGGEEVVGSLEDG-----------QALSDAIMGVS   79 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTC-------CEEEEESSCCSSCCSEEESCTTCH-----------HHHHHHHTTCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCC-------EEEEEeCCCCCCCccEEecCcCCH-----------HHHHHHHhCCC
Confidence            357999999999999999999998763       688999875221111112233221           13457788999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH------HHHHhCCCCCCCcEEEec
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL------ILKEFAPSIPAKNITCLT  157 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~------~~~~~~~~~~~~~i~~~t  157 (332)
                      +||++|+..........+.+..|+...+.+++.+.+...  .++|++|.. .+...      .+.+. ...++...++.+
T Consensus        80 ~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~--~~~V~~SS~-~vyg~~~~~~~~~~E~-~~~~~~~~Y~~s  155 (347)
T 4id9_A           80 AVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGV--RRFVFASSG-EVYPENRPEFLPVTED-HPLCPNSPYGLT  155 (347)
T ss_dssp             EEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTC--SEEEEEEEG-GGTTTTSCSSSSBCTT-SCCCCCSHHHHH
T ss_pred             EEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCC--CeEEEECCH-HHhCCCCCCCCCcCCC-CCCCCCChHHHH
Confidence            999999876543334467888999999999999988653  356666541 11000      00000 011223356777


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCeeeeEEE
Q 020022          158 RLDHNRALGQISEKLNVQVSDVKNVIIW  185 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~~~~v~  185 (332)
                      +....++...+++..+++..-++...|+
T Consensus       156 K~~~E~~~~~~~~~~~~~~~ilRp~~v~  183 (347)
T 4id9_A          156 KLLGEELVRFHQRSGAMETVILRFSHTQ  183 (347)
T ss_dssp             HHHHHHHHHHHHHHSSSEEEEEEECEEE
T ss_pred             HHHHHHHHHHHHHhcCCceEEEccceEe
Confidence            8887888888888888888888877777

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=98.80  E-value=1.2e-08  Score=91.41  Aligned_cols=155  Identities=19%  Similarity=0.209  Sum_probs=100.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhh---hhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA---LNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~---l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      ++++|.|+||+|++|++++..|+..|.       +|++.|+++....   ......|+.+.           .+..++++
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~Dl~d~-----------~~~~~~~~   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAE-------ILRLADLSPLDPAGPNEECVQCDLADA-----------NAVNAMVA   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEE-------EEEEEESSCCCCCCTTEEEEECCTTCH-----------HHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCC-------EEEEEecCCccccCCCCEEEEcCCCCH-----------HHHHHHHc
Confidence            346899999999999999999998763       7999998752111   00011222211           13456788


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEe
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCL  156 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~  156 (332)
                      ++|+||++||...  ..+..+.+..|+.....+.+.+.+.. . .+||++|.-...-.+    .+.+. ...++...++.
T Consensus        64 ~~D~vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~-~-~~iv~~SS~~~~g~~~~~~~~~e~-~~~~~~~~Y~~  138 (267)
T 3rft_A           64 GCDGIVHLGGISV--EKPFEQILQGNIIGLYNLYEAARAHG-Q-PRIVFASSNHTIGYYPQTERLGPD-VPARPDGLYGV  138 (267)
T ss_dssp             TCSEEEECCSCCS--CCCHHHHHHHHTHHHHHHHHHHHHTT-C-CEEEEEEEGGGGTTSBTTSCBCTT-SCCCCCSHHHH
T ss_pred             CCCEEEECCCCcC--cCCHHHHHHHHHHHHHHHHHHHHHcC-C-CEEEEEcchHHhCCCCCCCCCCCC-CCCCCCChHHH
Confidence            9999999999852  34567788999999999999998875 3 466666532211000    00000 01122335677


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeee
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKN  181 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~  181 (332)
                      ++.....+.+.+++++++....++.
T Consensus       139 sK~~~e~~~~~~a~~~g~~~~~vr~  163 (267)
T 3rft_A          139 SKCFGENLARMYFDKFGQETALVRI  163 (267)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeEEEEEe
Confidence            7877778888888888877555653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.77  E-value=2.7e-08  Score=90.74  Aligned_cols=164  Identities=12%  Similarity=0.096  Sum_probs=105.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      +|||.|+||+|++|++++..|+..|.       +|+.+++++  ....     +.... ....++. .....++++++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~--~~~~-----~~~~~-~~~~Dl~-~~~~~~~~~~~d~   65 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGN-------TPIILTRSI--GNKA-----INDYE-YRVSDYT-LEDLINQLNDVDA   65 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCC--C----------CCE-EEECCCC-HHHHHHHTTTCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-------EEEEEeCCC--Cccc-----CCceE-EEEcccc-HHHHHHhhcCCCE
Confidence            46899999999999999999998763       789998873  1111     11110 0111222 2345678899999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEechHH
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCLTRLD  160 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~t~ld  160 (332)
                      ||++|+.....  +..+.+..|+...+.+++.+.+...+  ++|++|.. .+...    .+.+. .-..+...++.+...
T Consensus        66 Vih~a~~~~~~--~~~~~~~~n~~~~~~ll~a~~~~~~~--r~v~~SS~-~vyg~~~~~~~~E~-~~~~p~~~Y~~sK~~  139 (311)
T 3m2p_A           66 VVHLAATRGSQ--GKISEFHDNEILTQNLYDACYENNIS--NIVYASTI-SAYSDETSLPWNEK-ELPLPDLMYGVSKLA  139 (311)
T ss_dssp             EEECCCCCCSS--SCGGGTHHHHHHHHHHHHHHHHTTCC--EEEEEEEG-GGCCCGGGCSBCTT-SCCCCSSHHHHHHHH
T ss_pred             EEEccccCCCC--ChHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEccH-HHhCCCCCCCCCCC-CCCCCCchhHHHHHH
Confidence            99999876433  44556788999999999999887632  46666531 11000    00000 011122356777888


Q ss_pred             HHHHHHHHHHHcCCCCCCeeeeEEEeccCC
Q 020022          161 HNRALGQISEKLNVQVSDVKNVIIWGNHSS  190 (332)
Q Consensus       161 s~r~~~~la~~l~v~~~~v~~~~v~G~hg~  190 (332)
                      ..++...+++..+++..-++...|+|....
T Consensus       140 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~  169 (311)
T 3m2p_A          140 CEHIGNIYSRKKGLCIKNLRFAHLYGFNEK  169 (311)
T ss_dssp             HHHHHHHHHHHSCCEEEEEEECEEECSCC-
T ss_pred             HHHHHHHHHHHcCCCEEEEeeCceeCcCCC
Confidence            888888888888988888887777886443

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.76  E-value=4e-08  Score=92.36  Aligned_cols=174  Identities=12%  Similarity=0.080  Sum_probs=105.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      |+.++|||.|+||+|++|++++..|+..|.       +|+++|+++..  .....  ..... ....++.-.....++++
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~--~~~v~-~~~~Dl~d~~~~~~~~~   92 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGH-------YVIASDWKKNE--HMTED--MFCDE-FHLVDLRVMENCLKVTE   92 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCCS--SSCGG--GTCSE-EEECCTTSHHHHHHHHT
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCC-------eEEEEECCCcc--chhhc--cCCce-EEECCCCCHHHHHHHhC
Confidence            334567999999999999999999998763       78999987521  11000  00000 00000000112456788


Q ss_pred             CCcEEEEeCCCCCCC---CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH---------HHHhC-CC
Q 020022           81 GVNIAVMVGGFPRKE---GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI---------LKEFA-PS  147 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~---~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~---------~~~~~-~~  147 (332)
                      ++|+||++|+.....   ..+..+.+..|+.....+++.+.+...  .++|++|... +....         +.+.. ..
T Consensus        93 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~--~~~V~~SS~~-v~~~~~~~~~~~~~~~E~~~~~  169 (379)
T 2c5a_A           93 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGI--KRFFYASSAC-IYPEFKQLETTNVSLKESDAWP  169 (379)
T ss_dssp             TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEGG-GSCGGGSSSSSSCEECGGGGSS
T ss_pred             CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEEeehh-eeCCCCCCCccCCCcCcccCCC
Confidence            999999999865321   245667788999999999999987652  2566665421 10000         00000 00


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      .++...++.++....++...+++..+++..-++...|+|...
T Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~  211 (379)
T 2c5a_A          170 AEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFG  211 (379)
T ss_dssp             BCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCC
Confidence            112234566777777777777777788777777666778643

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=98.74  E-value=6.5e-08  Score=89.15  Aligned_cols=179  Identities=13%  Similarity=0.107  Sum_probs=98.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch-hhhhhhHHHHhh--hhc-CCccceEeeCChh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-EALNGVKMELVD--AAF-PLLKGVVATTDAV   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~l~~~~~dl~~--~~~-~~~~~~~~~~~~~   76 (332)
                      |..+.+||.|+||+|++|++++..|+..|.       +|+..+++... +++.. ..++..  ... ....++.-.....
T Consensus         1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~   72 (337)
T 2c29_D            1 MGSQSETVCVTGASGFIGSWLVMRLLERGY-------TVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFD   72 (337)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTH
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHH
Confidence            666678999999999999999999998763       67777765421 01110 011110  000 0000111112356


Q ss_pred             hhcCCCcEEEEeCCCCCCCCCCH-HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH-----HHHHhCC-C--
Q 020022           77 EACTGVNIAVMVGGFPRKEGMER-KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL-----ILKEFAP-S--  147 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~~~~r-~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~-----~~~~~~~-~--  147 (332)
                      ++++++|+||++|+.......+. .+.+..|+.....+.+.+.+... -.+||++|....+...     ...+... .  
T Consensus        73 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~  151 (337)
T 2c29_D           73 EAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKT-VRRLVFTSSAGTVNIQEHQLPVYDESCWSDME  151 (337)
T ss_dssp             HHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSC-CCEEEEECCGGGTSCSSSCCSEECTTCCCCHH
T ss_pred             HHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-ccEEEEeeeHhhcccCCCCCcccCcccCCchh
Confidence            78899999999998542212222 34678899999999999888752 2356666643211000     0000000 0  


Q ss_pred             -----CCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          148 -----IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       148 -----~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                           -++...++.++....++...+++..|++..-++...|+|..
T Consensus       152 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~  197 (337)
T 2c29_D          152 FCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPF  197 (337)
T ss_dssp             HHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCC
T ss_pred             hhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence                 01111345566666666666666678887778877777864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.74  E-value=3.3e-09  Score=92.23  Aligned_cols=166  Identities=13%  Similarity=0.103  Sum_probs=94.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      |++ +|||.|+||+|++|++++..|+..|.       +|+++++++  +.+....   .... ....++.-..+..++++
T Consensus         1 M~~-m~~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~--~~~~~~~---~~~~-~~~~Dl~d~~~~~~~~~   66 (227)
T 3dhn_A            1 MEK-VKKIVLIGASGFVGSALLNEALNRGF-------EVTAVVRHP--EKIKIEN---EHLK-VKKADVSSLDEVCEVCK   66 (227)
T ss_dssp             --C-CCEEEEETCCHHHHHHHHHHHHTTTC-------EEEEECSCG--GGCCCCC---TTEE-EECCCTTCHHHHHHHHT
T ss_pred             CCC-CCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEEcCc--ccchhcc---CceE-EEEecCCCHHHHHHHhc
Confidence            643 47999999999999999999998763       799999875  2222110   0000 00001111123567889


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH--HHHHhCCCCCCCcEEEech
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL--ILKEFAPSIPAKNITCLTR  158 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~--~~~~~~~~~~~~~i~~~t~  158 (332)
                      ++|+||+++|....    ..+.+..|+...+.+++.+.+...  .++|++|.-...-..  ....-.+ ..+...++.+.
T Consensus        67 ~~d~vi~~a~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~~~~~-~~p~~~Y~~sK  139 (227)
T 3dhn_A           67 GADAVISAFNPGWN----NPDIYDETIKVYLTIIDGVKKAGV--NRFLMVGGAGSLFIAPGLRLMDSG-EVPENILPGVK  139 (227)
T ss_dssp             TCSEEEECCCC----------CCSHHHHHHHHHHHHHHHTTC--SEEEEECCSTTSEEETTEEGGGTT-CSCGGGHHHHH
T ss_pred             CCCEEEEeCcCCCC----ChhHHHHHHHHHHHHHHHHHHhCC--CEEEEeCChhhccCCCCCccccCC-cchHHHHHHHH
Confidence            99999999986522    122456799999999999988753  256666642110000  0000001 11123455566


Q ss_pred             HHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          159 LDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      ....++...+++..+++..-++...|+|.
T Consensus       140 ~~~e~~~~~~~~~~~~~~~ilrp~~v~g~  168 (227)
T 3dhn_A          140 ALGEFYLNFLMKEKEIDWVFFSPAADMRP  168 (227)
T ss_dssp             HHHHHHHHTGGGCCSSEEEEEECCSEEES
T ss_pred             HHHHHHHHHHhhccCccEEEEeCCcccCC
Confidence            66555666666666666666665555665

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.71  E-value=2.4e-08  Score=92.35  Aligned_cols=174  Identities=12%  Similarity=0.051  Sum_probs=102.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-------eC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-------TT   73 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-------~~   73 (332)
                      |++++|||.|+||+|++|++++..|+..|.     ..++...|+........    .+.....  ..++..       ..
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-----~~~v~~~~~~~~~~~~~----~l~~~~~--~~~~~~~~~Dl~d~~   88 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYE-----TYKIINFDALTYSGNLN----NVKSIQD--HPNYYFVKGEIQNGE   88 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCT-----TEEEEEEECCCTTCCGG----GGTTTTT--CTTEEEEECCTTCHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCC-----CcEEEEEeccccccchh----hhhhhcc--CCCeEEEEcCCCCHH
Confidence            334568999999999999999999998762     12678888753111111    1111110  011111       11


Q ss_pred             ChhhhcCC--CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH-----HHHHh
Q 020022           74 DAVEACTG--VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL-----ILKEF  144 (332)
Q Consensus        74 ~~~~al~~--aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~-----~~~~~  144 (332)
                      ...+++++  +|+||++|+.....  ..+..+.+..|+.....+++.+.+...  .++|++|.. .+...     .+.+.
T Consensus        89 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~--~~~v~~SS~-~vy~~~~~~~~~~E~  165 (346)
T 4egb_A           89 LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPH--IKLVQVSTD-EVYGSLGKTGRFTEE  165 (346)
T ss_dssp             HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTT--SEEEEEEEG-GGGCCCCSSCCBCTT
T ss_pred             HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCC--CEEEEeCch-HHhCCCCcCCCcCCC
Confidence            23456666  99999999875322  133456788999999999999988753  356666532 11000     00000


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                       .-..+...++.+.....++...+++..+++..-++...|+|...
T Consensus       166 -~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          166 -TPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             -SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred             -CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCC
Confidence             00112234667777777888888888899888888777888644

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=98.69  E-value=6.5e-08  Score=88.31  Aligned_cols=109  Identities=17%  Similarity=0.184  Sum_probs=71.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh--------hhhc---------
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV--------DAAF---------   63 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~--------~~~~---------   63 (332)
                      |+++++||+||| +|.||+.++..|+..|.       +|+++|+++  +.++.....+.        ....         
T Consensus        11 ~~~~~~~I~VIG-~G~mG~~iA~~la~~G~-------~V~~~d~~~--~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~   80 (302)
T 1f0y_A           11 KKIIVKHVTVIG-GGLMGAGIAQVAAATGH-------TVVLVDQTE--DILAKSKKGIEESLRKVAKKKFAENPKAGDEF   80 (302)
T ss_dssp             -CCCCCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHH
T ss_pred             ccccCCEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCH--HHHHHHHHHHHHHHHHHHHcCCCCccccchhh
Confidence            555567999999 69999999999998763       799999984  33332111111        0000         


Q ss_pred             --CCccceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           64 --PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        64 --~~~~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                        ....+++.+++..+++++||+||++.-              .+..+.+++.+.+.+++++++++  +||...
T Consensus        81 ~~~~~~~i~~~~~~~~~~~~aD~Vi~avp--------------~~~~~~~~v~~~l~~~~~~~~iv--~s~ts~  138 (302)
T 1f0y_A           81 VEKTLSTIATSTDAASVVHSTDLVVEAIV--------------ENLKVKNELFKRLDKFAAEHTIF--ASNTSS  138 (302)
T ss_dssp             HHHHHHTEEEESCHHHHTTSCSEEEECCC--------------SCHHHHHHHHHHHTTTSCTTCEE--EECCSS
T ss_pred             HHHHHhceEEecCHHHhhcCCCEEEEcCc--------------CcHHHHHHHHHHHHhhCCCCeEE--EECCCC
Confidence              001246677788779999999999851              23455567778888887777643  454433

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=98.67  E-value=1e-07  Score=92.57  Aligned_cols=109  Identities=21%  Similarity=0.273  Sum_probs=72.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh----c-C---------Cc
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----F-P---------LL   66 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~----~-~---------~~   66 (332)
                      |+|+.+||+||| +|.||+.++..|+..|.       +|+++|+++  +.++.....+....    . .         ..
T Consensus         1 Msm~~~kVgVIG-aG~MG~~IA~~la~aG~-------~V~l~D~~~--e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~   70 (483)
T 3mog_A            1 MSLNVQTVAVIG-SGTMGAGIAEVAASHGH-------QVLLYDISA--EALTRAIDGIHARLNSRVTRGKLTAETCERTL   70 (483)
T ss_dssp             ---CCCCEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSCH--HHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHH
T ss_pred             CCCCCCEEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEECCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence            666677999999 69999999999998874       699999985  44432221111100    0 0         11


Q ss_pred             cceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           67 KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        67 ~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      .+++.+++. +++++||+||.+.              ..+..+.+++...+.++++|+++  ++||.+.+
T Consensus        71 ~~i~~~~~~-~~~~~aDlVIeAV--------------pe~~~vk~~v~~~l~~~~~~~~I--lasntSti  123 (483)
T 3mog_A           71 KRLIPVTDI-HALAAADLVIEAA--------------SERLEVKKALFAQLAEVCPPQTL--LTTNTSSI  123 (483)
T ss_dssp             HTEEEECCG-GGGGGCSEEEECC--------------CCCHHHHHHHHHHHHHHSCTTCE--EEECCSSS
T ss_pred             hceeEeCCH-HHhcCCCEEEEcC--------------CCcHHHHHHHHHHHHHhhccCcE--EEecCCCC
Confidence            256677665 5799999999984              23556777888889988877763  44554443

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=98.67  E-value=7.7e-08  Score=87.11  Aligned_cols=101  Identities=18%  Similarity=0.202  Sum_probs=69.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh---------c------CCccc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA---------F------PLLKG   68 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~---------~------~~~~~   68 (332)
                      +.+||+||| +|.+|+.++..++..|.       +|+++|+++  +.++.....+.+..         .      ....+
T Consensus         3 ~~~kV~VIG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~   72 (283)
T 4e12_A            3 GITNVTVLG-TGVLGSQIAFQTAFHGF-------AVTAYDINT--DALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGG   72 (283)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSH--HHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcC
Confidence            457999999 69999999999998774       799999984  44432222211100         0      00124


Q ss_pred             eEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEE
Q 020022           69 VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL  128 (332)
Q Consensus        69 ~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~vi  128 (332)
                      +..+++..+++++||+||.+..              .+.+..+++.+.+.++++|+++++
T Consensus        73 i~~~~~~~~~~~~aDlVi~av~--------------~~~~~~~~v~~~l~~~~~~~~il~  118 (283)
T 4e12_A           73 IRYSDDLAQAVKDADLVIEAVP--------------ESLDLKRDIYTKLGELAPAKTIFA  118 (283)
T ss_dssp             CEEESCHHHHTTTCSEEEECCC--------------SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred             eEEeCCHHHHhccCCEEEEecc--------------CcHHHHHHHHHHHHhhCCCCcEEE
Confidence            5667788888999999999852              245567777888888887776443

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=98.66  E-value=3.8e-08  Score=91.36  Aligned_cols=176  Identities=15%  Similarity=0.109  Sum_probs=104.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch--hhhhhhHHHHhhhhcCCccceEe----eCChhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--EALNGVKMELVDAAFPLLKGVVA----TTDAVE   77 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~--~~l~~~~~dl~~~~~~~~~~~~~----~~~~~~   77 (332)
                      +++||.|+||+|++|++++..|+..|.       +|+++|++...  +.+......+.........-+..    .....+
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   98 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQ-------KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNN   98 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHH
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHH
Confidence            457999999999999999999998763       78999886421  11111111010000000000111    112446


Q ss_pred             hcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH---HHHHhCCCCCCCc
Q 020022           78 ACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL---ILKEFAPSIPAKN  152 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~---~~~~~~~~~~~~~  152 (332)
                      +++++|+||++||.....  ..+..+.+..|+.....+++.+.+.. . .++|++|...-.-..   ...+..+ ..+..
T Consensus        99 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~~v~~SS~~~~~~~~~~~~~E~~~-~~~~~  175 (352)
T 1sb8_A           99 ACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-V-QSFTYAASSSTYGDHPGLPKVEDTI-GKPLS  175 (352)
T ss_dssp             HHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-SEEEEEEEGGGGTTCCCSSBCTTCC-CCCCS
T ss_pred             HhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-C-CEEEEeccHHhcCCCCCCCCCCCCC-CCCCC
Confidence            788999999999865311  12345677889999999999988764 2 356666643210000   0000000 01223


Q ss_pred             EEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          153 ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       153 i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      .++.+.....++...+++..+++..-++...|+|...
T Consensus       176 ~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~  212 (352)
T 1sb8_A          176 PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQ  212 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTC
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCC
Confidence            4566777777777777788898888888767788643

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.64  E-value=4.2e-08  Score=90.71  Aligned_cols=174  Identities=11%  Similarity=0.046  Sum_probs=101.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhc--ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARG--VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVE   77 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~   77 (332)
                      |+. ++||.|+||+|++|++++..|+..  +.       +|+++|++....... ...++.+... ....++.-.....+
T Consensus         1 Ms~-m~~vlVTGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~   71 (348)
T 1oc2_A            1 MSQ-FKNIIVTGGAGFIGSNFVHYVYNNHPDV-------HVTVLDKLTYAGNKA-NLEAILGDRVELVVGDIADAELVDK   71 (348)
T ss_dssp             --C-CSEEEEETTTSHHHHHHHHHHHHHCTTC-------EEEEEECCCTTCCGG-GTGGGCSSSEEEEECCTTCHHHHHH
T ss_pred             CCc-CcEEEEeCCccHHHHHHHHHHHHhCCCC-------EEEEEeCCCCCCChh-HHhhhccCCeEEEECCCCCHHHHHH
Confidence            642 469999999999999999999986  42       788998863111111 1111110000 00000001112456


Q ss_pred             hcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH----------------H
Q 020022           78 ACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----------------L  139 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~----------------~  139 (332)
                      +++++|+||++||.....  ..+..+.+..|+.....+++.+.+..   +++|++|... +..                .
T Consensus        72 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~---~~~v~~SS~~-vyg~~~~~~~~~~~~~~~~~  147 (348)
T 1oc2_A           72 LAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD---IRFHHVSTDE-VYGDLPLREDLPGHGEGPGE  147 (348)
T ss_dssp             HHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT---CEEEEEEEGG-GGCCBCCGGGSTTTTCSTTS
T ss_pred             HhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC---CeEEEecccc-eeCCCcccccccccccccCC
Confidence            788999999999875311  11335677889999999999998874   3666665321 000                0


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      .+.+. ...++...++.++....++...+++..+++..-++...|+|..
T Consensus       148 ~~~E~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~  195 (348)
T 1oc2_A          148 KFTAE-TNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPY  195 (348)
T ss_dssp             SBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTT
T ss_pred             CcCCC-CCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCC
Confidence            00000 0112233566677777788777778788877777766667754

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=98.63  E-value=2.1e-07  Score=85.71  Aligned_cols=172  Identities=12%  Similarity=0.094  Sum_probs=97.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh--hHHHHhhhh-cC-CccceEeeCChhhhcC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG--VKMELVDAA-FP-LLKGVVATTDAVEACT   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~--~~~dl~~~~-~~-~~~~~~~~~~~~~al~   80 (332)
                      .+||.|+||+|++|++++..|+..|.       +|+..+++..  ....  ...++.... .. ....+.......++++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGY-------AVNTTVRDPD--NQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTC-------EEEEEESCTT--CTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEEcCcc--hhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc
Confidence            46899999999999999999998763       6777666532  1110  011121100 00 0001111123457889


Q ss_pred             CCcEEEEeCCCCCCCCCCH-HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC--CC---------
Q 020022           81 GVNIAVMVGGFPRKEGMER-KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP--SI---------  148 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r-~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~--~~---------  148 (332)
                      ++|+||++|+.......+. .+.+..|+.....+.+.+.+.. .-.+||++|....+..  ......  -+         
T Consensus        80 ~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~--~~~~~~~~~~~E~~~~~~~  156 (338)
T 2rh8_A           80 GCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTI--NQLDGTGLVVDEKNWTDIE  156 (338)
T ss_dssp             TCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHH--HHHTCSCCCCCTTTTTCC-
T ss_pred             CCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeec--CCcCCCCcccChhhccchh
Confidence            9999999998542111122 2367889999999999888763 1235666664321110  011100  00         


Q ss_pred             ---CC--Cc-EEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          149 ---PA--KN-ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       149 ---~~--~~-i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                         |.  .. .++.++....++...+++..|++..-++...|+|..
T Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~  202 (338)
T 2rh8_A          157 FLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSS  202 (338)
T ss_dssp             ------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCC
T ss_pred             hccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence               00  01 356677766677667777778887778877777863

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=98.62  E-value=9.9e-08  Score=88.94  Aligned_cols=172  Identities=13%  Similarity=0.079  Sum_probs=97.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHh--cccCCCCCceEEEEEeCCCchhh-----hh--hhHHHHhhhhc-CCccceEee
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIAR--GVMLGTDQPVILHMLDIPPAAEA-----LN--GVKMELVDAAF-PLLKGVVAT   72 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~--~~~~~~~~~~ei~L~D~~~~~~~-----l~--~~~~dl~~~~~-~~~~~~~~~   72 (332)
                      ++++||.|+||+|++|++++..|+.  .|.       +|+++|+......     .+  +....+..... ....++.-.
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   80 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKA-------KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNP   80 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTS-------EEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCC-------eEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCH
Confidence            4568999999999999999999998  553       7999998642100     00  00000100000 000000001


Q ss_pred             CChhhh-cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH---HHHHhCCCC
Q 020022           73 TDAVEA-CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL---ILKEFAPSI  148 (332)
Q Consensus        73 ~~~~~a-l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~---~~~~~~~~~  148 (332)
                      ....++ ..++|+||++||.......+..+.+..|+.....+++.+++..   +.+|++|. ..+...   .+.+- ...
T Consensus        81 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~V~~SS-~~vyg~~~~~~~E~-~~~  155 (362)
T 3sxp_A           81 LDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK---AKVIYASS-AGVYGNTKAPNVVG-KNE  155 (362)
T ss_dssp             HHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT---CEEEEEEE-GGGGCSCCSSBCTT-SCC
T ss_pred             HHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC---CcEEEeCc-HHHhCCCCCCCCCC-CCC
Confidence            122344 6799999999997654445677888999999999999998764   23556654 211000   00000 001


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      .+...++.+.....++...+++.  ++...++...|+|..
T Consensus       156 ~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~  193 (362)
T 3sxp_A          156 SPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPR  193 (362)
T ss_dssp             CCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTT
T ss_pred             CCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcC
Confidence            11223566666665655555444  555566654567753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=98.62  E-value=2e-08  Score=93.97  Aligned_cols=170  Identities=9%  Similarity=0.064  Sum_probs=100.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeCChhhhcC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATTDAVEACT   80 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~~~~~al~   80 (332)
                      +++|||.|+||+|++|++++..|+.. +.       +|+.+|++.  +.+... .+..... ....++. ......++++
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~--~~~~~~-~~~~~v~-~~~~Dl~~d~~~~~~~~~   90 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDW-------EVFGMDMQT--DRLGDL-VKHERMH-FFEGDITINKEWVEYHVK   90 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSC-------EEEEEESCC--TTTGGG-GGSTTEE-EEECCTTTCHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCC-------EEEEEeCCh--hhhhhh-ccCCCeE-EEeCccCCCHHHHHHHhc
Confidence            35679999999999999999999986 53       789999874  222111 0000000 0000110 1112345678


Q ss_pred             CCcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH-HhC-CCC--------
Q 020022           81 GVNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK-EFA-PSI--------  148 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~-~~~-~~~--------  148 (332)
                      ++|+||++|+......  .+..+.+..|+...+.+++.+.+.+   .++|++|.. .+....-. .+. ...        
T Consensus        91 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~v~~SS~-~vyg~~~~~~~~e~~~~~~~~p~~  166 (372)
T 3slg_A           91 KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTS-EVYGMCADEQFDPDASALTYGPIN  166 (372)
T ss_dssp             HCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT---CEEEEECCG-GGGBSCCCSSBCTTTCCEEECCTT
T ss_pred             cCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC---CcEEEeCcH-HHhCCCCCCCCCccccccccCCCC
Confidence            9999999998754211  2345667889888899999998875   356666642 21000000 000 000        


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      ++...++.++....++...+++. +++..-++...|+|..
T Consensus       167 ~p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~  205 (372)
T 3slg_A          167 KPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPG  205 (372)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSS
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCC
Confidence            11124666777777777767666 7777777766677864

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.62  E-value=6.9e-08  Score=88.80  Aligned_cols=171  Identities=13%  Similarity=0.064  Sum_probs=102.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-e------CChh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-T------TDAV   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~------~~~~   76 (332)
                      ..|||.|+||+|++|++++..|+..|. +    .+|+.+|+.......+. ..++..     ..++.. .      ....
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~-~----~~V~~~~r~~~~~~~~~-~~~~~~-----~~~~~~~~~Dl~d~~~~~   70 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHP-D----WEVINIDKLGYGSNPAN-LKDLED-----DPRYTFVKGDVADYELVK   70 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCT-T----CEEEEEECCCTTCCGGG-GTTTTT-----CTTEEEEECCTTCHHHHH
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCC-C----CEEEEEecCcccCchhH-Hhhhcc-----CCceEEEEcCCCCHHHHH
Confidence            346899999999999999999998641 0    17888887531111111 011110     011111 1      1234


Q ss_pred             hhcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCC
Q 020022           77 EACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPA  150 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~  150 (332)
                      +++.++|+||++||.....  ..+..+.+..|+.....+++.+.+.. ...++|++|... +...    .+.+. ...++
T Consensus        71 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~-vyg~~~~~~~~E~-~~~~~  147 (336)
T 2hun_A           71 ELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRREN-PEVRFVHVSTDE-VYGDILKGSFTEN-DRLMP  147 (336)
T ss_dssp             HHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEEEEGG-GGCCCSSSCBCTT-BCCCC
T ss_pred             HHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEeccHH-HHCCCCCCCcCCC-CCCCC
Confidence            5667899999999875311  12345677889999999999998874 234676666321 0000    00000 01222


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      ...++.++....++...+++..+++..-++...|+|..
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~  185 (336)
T 2hun_A          148 SSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPY  185 (336)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTT
T ss_pred             CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcC
Confidence            33566777777788778888888877777777777854

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=98.62  E-value=2.2e-07  Score=86.87  Aligned_cols=109  Identities=17%  Similarity=0.224  Sum_probs=75.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh----hcCCccceEeeCChh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA----AFPLLKGVVATTDAV   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~----~~~~~~~~~~~~~~~   76 (332)
                      |++++|||+||| +|.+|++++..|+..|.       ++.++|+++  +.++.....-...    ...+..++..+++..
T Consensus        25 m~~~~mkI~VIG-aG~mG~alA~~La~~G~-------~V~l~~r~~--~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~   94 (356)
T 3k96_A           25 MEPFKHPIAILG-AGSWGTALALVLARKGQ-------KVRLWSYES--DHVDEMQAEGVNNRYLPNYPFPETLKAYCDLK   94 (356)
T ss_dssp             --CCCSCEEEEC-CSHHHHHHHHHHHTTTC-------CEEEECSCH--HHHHHHHHHSSBTTTBTTCCCCTTEEEESCHH
T ss_pred             ccccCCeEEEEC-ccHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHcCCCcccCCCCccCCCeEEECCHH
Confidence            555678999999 69999999999998763       699999974  3333221110000    011234577888888


Q ss_pred             hhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           77 EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      +++++||+||++.  |              ...++++++.+..+.+++.+++.++|..+
T Consensus        95 ea~~~aDvVilaV--p--------------~~~~~~vl~~i~~~l~~~~ivvs~~kGi~  137 (356)
T 3k96_A           95 ASLEGVTDILIVV--P--------------SFAFHEVITRMKPLIDAKTRIAWGTKGLA  137 (356)
T ss_dssp             HHHTTCCEEEECC--C--------------HHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred             HHHhcCCEEEECC--C--------------HHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence            9999999999984  1              12466778888888767777777787554

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=98.61  E-value=3.2e-07  Score=88.25  Aligned_cols=105  Identities=12%  Similarity=0.146  Sum_probs=72.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH-HHHhhhh----c------CCccceEee
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK-MELVDAA----F------PLLKGVVAT   72 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~-~dl~~~~----~------~~~~~~~~~   72 (332)
                      +.+||+||| +|.||+.+|..|+..|.       +|+++|+++  ++..... ..+....    .      ....+++.+
T Consensus        53 ~i~kVaVIG-aG~MG~~IA~~la~aG~-------~V~l~D~~~--e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t  122 (460)
T 3k6j_A           53 DVNSVAIIG-GGTMGKAMAICFGLAGI-------ETFLVVRNE--QRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT  122 (460)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEECcH--HHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe
Confidence            347999999 69999999999998874       899999985  2221111 0111110    0      112456777


Q ss_pred             CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           73 TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        73 ~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      ++. +++++||+||.+.              .++..+.+++...+.++++|+++  ++||.+.
T Consensus       123 ~dl-~al~~aDlVIeAV--------------pe~~~vk~~v~~~l~~~~~~~aI--lasnTSs  168 (460)
T 3k6j_A          123 SDF-HKLSNCDLIVESV--------------IEDMKLKKELFANLENICKSTCI--FGTNTSS  168 (460)
T ss_dssp             SCG-GGCTTCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTTCE--EEECCSS
T ss_pred             CCH-HHHccCCEEEEcC--------------CCCHHHHHHHHHHHHhhCCCCCE--EEecCCC
Confidence            776 5899999999984              23567788888999999988874  3555444

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.59  E-value=3.3e-07  Score=83.25  Aligned_cols=165  Identities=14%  Similarity=0.093  Sum_probs=103.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |||.|+||+|++|++++..|+..|.       +|+.+|+++.  .....    .+... ....++.... ..+++++ |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~----~~~~~~~~~~Dl~d~~-~~~~~~~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGY-------EVVVVDNLSS--GRREF----VNPSAELHVRDLKDYS-WGAGIKG-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECCCSS--CCGGG----SCTTSEEECCCTTSTT-TTTTCCC-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-------EEEEEeCCCC--Cchhh----cCCCceEEECccccHH-HHhhcCC-CE
Confidence            5899999999999999999998763       7899988642  11100    00000 0000111111 4456666 99


Q ss_pred             EEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEech
Q 020022           85 AVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCLTR  158 (332)
Q Consensus        85 Vi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~t~  158 (332)
                      ||++|+.+..  ...+....+..|+.....+++.+.+...  .++|++|... +...    ...+. ...++...++.++
T Consensus        66 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~iv~~SS~~-vyg~~~~~~~~e~-~~~~p~~~Y~~sK  141 (312)
T 3ko8_A           66 VFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGV--RTVVFASSST-VYGDADVIPTPEE-EPYKPISVYGAAK  141 (312)
T ss_dssp             EEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEGG-GGCSCSSSSBCTT-SCCCCCSHHHHHH
T ss_pred             EEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEeCcHH-HhCCCCCCCCCCC-CCCCCCChHHHHH
Confidence            9999986532  2245567788999999999999988753  2566665321 1000    00000 0122233567778


Q ss_pred             HHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      ....++...+++..+++..-++...|+|...
T Consensus       142 ~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~  172 (312)
T 3ko8_A          142 AAGEVMCATYARLFGVRCLAVRYANVVGPRL  172 (312)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEECTTC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeeccccCcCC
Confidence            8878888888888898888888777788643

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=98.59  E-value=1.2e-07  Score=86.65  Aligned_cols=166  Identities=12%  Similarity=0.146  Sum_probs=101.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhh--hhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL--NGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l--~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      +.++|.|+||+|++|++++..|+..|.       +|+++|+++..+.+  .-...|+.+           .....+++++
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~~~~l~~~~~~~Dl~d-----------~~~~~~~~~~   72 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNV-------EVFGTSRNNEAKLPNVEMISLDIMD-----------SQRVKKVISD   72 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCTTCCCTTEEEEECCTTC-----------HHHHHHHHHH
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCC-------EEEEEecCCccccceeeEEECCCCC-----------HHHHHHHHHh
Confidence            457999999999999999999998763       78999987521000  000011111           1123445555


Q ss_pred             --CcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch----H-HHHHHhCCCCCCCc
Q 020022           82 --VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN----A-LILKEFAPSIPAKN  152 (332)
Q Consensus        82 --aDiVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~----~-~~~~~~~~~~~~~~  152 (332)
                        .|+||++||....  ...+..+.+..|+.....+++.+.+.. +..++|++|...-.-    . ..+.+. ...++..
T Consensus        73 ~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~~~E~-~~~~~~~  150 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSN-LDCRILTIGSSEEYGMILPEESPVSEE-NQLRPMS  150 (321)
T ss_dssp             HCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-CCCEEEEEEEGGGTBSCCGGGCSBCTT-SCCBCCS
T ss_pred             cCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEccHHhcCCCCCCCCCCCCC-CCCCCCC
Confidence              8999999987531  123456778899999999999997663 234666666432100    0 000000 0112223


Q ss_pred             EEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          153 ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       153 i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      .++.++....++...+++..|++..-++...|+|...
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~  187 (321)
T 2pk3_A          151 PYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQ  187 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTC
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCC
Confidence            4666777777777777777788777777767778643

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.58  E-value=6.6e-07  Score=78.17  Aligned_cols=110  Identities=15%  Similarity=0.130  Sum_probs=78.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~al~~   81 (332)
                      +.|||.|+||+|++|++++..|+..|.       +|+++++++  +.+..    +.+...  ....++.  ....+++.+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-------~V~~~~R~~--~~~~~----~~~~~~~~~~~~Dl~--~~~~~~~~~   84 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-------EPVAMVRNE--EQGPE----LRERGASDIVVANLE--EDFSHAFAS   84 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSG--GGHHH----HHHTTCSEEEECCTT--SCCGGGGTT
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-------eEEEEECCh--HHHHH----HHhCCCceEEEcccH--HHHHHHHcC
Confidence            458999999999999999999998763       799999875  33321    111110  0001111  456788999


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +|+||++||....  .+....+..|+.....+++.+++...  .++|++|.
T Consensus        85 ~D~vi~~ag~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~--~~iv~~SS  131 (236)
T 3e8x_A           85 IDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRGI--KRFIMVSS  131 (236)
T ss_dssp             CSEEEECCCCCTT--SCHHHHHHTTTHHHHHHHHHHHHHTC--CEEEEECC
T ss_pred             CCEEEECCCCCCC--CCccccchhhHHHHHHHHHHHHHcCC--CEEEEEec
Confidence            9999999997642  45677788899999999999988753  35667664

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=98.57  E-value=9e-08  Score=89.86  Aligned_cols=170  Identities=14%  Similarity=0.044  Sum_probs=101.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcc-cCCCCCceEEEEEeCCCchhhhhhhHHHHh-hhhc-CCccceEeeCChhhhcCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELV-DAAF-PLLKGVVATTDAVEACTG   81 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~-~~~~-~~~~~~~~~~~~~~al~~   81 (332)
                      +|||.|+||+|++|++++..|+..| .       +|+++|++.... ..    .+. .... ....++.-.....+++++
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~-------~V~~~~r~~~~~-~~----~l~~~~~v~~~~~Dl~d~~~l~~~~~~   99 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVN-------QVHVVDNLLSAE-KI----NVPDHPAVRFSETSITDDALLASLQDE   99 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCS-------EEEEECCCTTCC-GG----GSCCCTTEEEECSCTTCHHHHHHCCSC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCc-------eEEEEECCCCCc-hh----hccCCCceEEEECCCCCHHHHHHHhhC
Confidence            4799999999999999999999876 3       789998864211 00    010 0000 000000001124467789


Q ss_pred             CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhh-cCCCeEEEEecCcccchHH----HHH--HhCC--CC-C
Q 020022           82 VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQH-AAPNCKVLVVANPANTNAL----ILK--EFAP--SI-P  149 (332)
Q Consensus        82 aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~~viv~tNP~~~~~~----~~~--~~~~--~~-~  149 (332)
                      +|+||++||.....  ..+..+.+..|+...+.+++.+.+. ..  .++|++|... +...    .+.  +...  .. .
T Consensus       100 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~--~~~V~~SS~~-vyg~~~~~~~~~~E~~~~~~~~~  176 (377)
T 2q1s_A          100 YDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRL--KKVVYSAAGC-SIAEKTFDDAKATEETDIVSLHN  176 (377)
T ss_dssp             CSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSC--CEEEEEEEC---------------CCCCCCCSSC
T ss_pred             CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC--CeEEEeCCHH-HcCCCCCCCcCcccccccccccC
Confidence            99999999865311  1244567788999999999998876 32  2566665421 1000    011  1000  01 2


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      +...++.+.....++...+++..+++..-++...|+|...
T Consensus       177 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          177 NDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCC
Confidence            2234666777777777777777788888888777788643

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=98.56  E-value=3.7e-07  Score=92.84  Aligned_cols=145  Identities=17%  Similarity=0.174  Sum_probs=96.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhH---HHHhh----hh----cCCccceEee
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVK---MELVD----AA----FPLLKGVVAT   72 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~---~dl~~----~~----~~~~~~~~~~   72 (332)
                      ..||+|+| +|.||+.+|..++..|+       +++|+|+++  +.+. +..   ..+..    ..    ......++.+
T Consensus       316 i~~v~ViG-aG~MG~gIA~~~a~aG~-------~V~l~D~~~--~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~  385 (742)
T 3zwc_A          316 VSSVGVLG-LGTMGRGIAISFARVGI-------SVVAVESDP--KQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFS  385 (742)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTC-------EEEEECSSH--HHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEE
T ss_pred             ccEEEEEc-ccHHHHHHHHHHHhCCC-------chhcccchH--hhhhhHHHHHHHHHHHHHHhccccchhhhhhhhccc
Confidence            36999999 69999999999998875       899999985  2222 111   11111    00    0122455565


Q ss_pred             CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC------
Q 020022           73 TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP------  146 (332)
Q Consensus        73 ~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~------  146 (332)
                      ++ .+++++||+||.+.              .+|+++.+++..+++++++|++  |+.||.+.+...-+....+      
T Consensus       386 ~~-~~~l~~aDlVIEAV--------------~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~i  448 (742)
T 3zwc_A          386 SS-TKELSTVDLVVEAV--------------FEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVI  448 (742)
T ss_dssp             SC-GGGGGSCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEE
T ss_pred             Cc-HHHHhhCCEEEEec--------------cccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccc
Confidence            54 57799999999984              4689999999999999999887  6799988754433333221      


Q ss_pred             C---C-CCC------cE-EEechHHHHHHHHHHHHHcCCCC
Q 020022          147 S---I-PAK------NI-TCLTRLDHNRALGQISEKLNVQV  176 (332)
Q Consensus       147 ~---~-~~~------~i-~~~t~lds~r~~~~la~~l~v~~  176 (332)
                      |   | |+.      .| +..|.-++......+++++|..|
T Consensus       449 g~HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~p  489 (742)
T 3zwc_A          449 GTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIG  489 (742)
T ss_dssp             EEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEE
T ss_pred             cccccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCC
Confidence            1   1 222      12 22366666666667788888654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=98.56  E-value=3.4e-07  Score=85.07  Aligned_cols=163  Identities=17%  Similarity=0.156  Sum_probs=101.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT----   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~----   80 (332)
                      .|+|.|+||+|++|++++..|+..|..      +|+++++++....+.    .+....  ....+.......++++    
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~------~V~~~~r~~~~~~~~----~~~~~~--~~~d~~~~~~~~~~~~~~~~  113 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGIT------DILVVDNLKDGTKFV----NLVDLN--IADYMDKEDFLIQIMAGEEF  113 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCC------CEEEEECCSSGGGGG----GTTTSC--CSEEEEHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCc------EEEEEecCCCcchhh----cccCce--EeeecCcHHHHHHHHhhccc
Confidence            478999999999999999999987621      688888864221111    111110  1111111112334455    


Q ss_pred             -CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC--------CCCC
Q 020022           81 -GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS--------IPAK  151 (332)
Q Consensus        81 -~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~--------~~~~  151 (332)
                       ++|+||++||.......+..+.+..|+.....+++.+.+.. .  ++|++|... +  +-  . ..+        ..+.
T Consensus       114 ~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~--r~V~~SS~~-v--~g--~-~~~~~~~E~~~~~p~  184 (357)
T 2x6t_A          114 GDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I--PFLYASSAA-T--YG--G-RTSDFIESREYEKPL  184 (357)
T ss_dssp             SSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C--CEEEEEEGG-G--GC--S-CSSCCCSSGGGCCCS
T ss_pred             CCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEcchH-H--hC--C-CCCCCcCCcCCCCCC
Confidence             59999999997654345667788999999999999998865 2  566665321 1  00  0 000        0112


Q ss_pred             cEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      ..++.++....++...+++..+++..-++...|+|..
T Consensus       185 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~  221 (357)
T 2x6t_A          185 NVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPR  221 (357)
T ss_dssp             SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSS
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCC
Confidence            3466677777777777777778887778877777864

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.56  E-value=1.1e-07  Score=87.32  Aligned_cols=173  Identities=12%  Similarity=-0.041  Sum_probs=99.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcC-CccceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP-LLKGVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~-~~~~~~~~~~~~~al~~   81 (332)
                      +++||.|+||+|++|++++..|+..|.       +|+++|++..... .....++... ... ...++.-.....+++++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   84 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGY-------RVHGLVARRSSDT-RWRLRELGIEGDIQYEDGDMADACSVQRAVIK   84 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCSSCC-CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCCcccc-ccchhhccccCceEEEECCCCCHHHHHHHHHH
Confidence            458999999999999999999998763       7899998752110 0011111000 000 00000001123345554


Q ss_pred             --CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcE
Q 020022           82 --VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNI  153 (332)
Q Consensus        82 --aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i  153 (332)
                        .|+||++||.....  ..+..+.+..|+.....+++.+.+... ..++|++|... +...    .+.+. .-..+...
T Consensus        85 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~v~~SS~~-v~g~~~~~~~~E~-~~~~p~~~  161 (335)
T 1rpn_A           85 AQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSP-ETRFYQASTSE-MFGLIQAERQDEN-TPFYPRSP  161 (335)
T ss_dssp             HCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TSEEEEEEEGG-GGCSCSSSSBCTT-SCCCCCSH
T ss_pred             cCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeCHH-HhCCCCCCCCCcc-cCCCCCCh
Confidence              59999999865321  234567788899999999999988752 23566666421 1000    00000 00112234


Q ss_pred             EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          154 TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       154 ~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      ++.+.....++...+++..+++..-++...++|.
T Consensus       162 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp  195 (335)
T 1rpn_A          162 YGVAKLYGHWITVNYRESFGLHASSGILFNHESP  195 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECT
T ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCC
Confidence            6677777778877788888887666665555664

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=98.55  E-value=4.8e-07  Score=87.24  Aligned_cols=110  Identities=15%  Similarity=0.210  Sum_probs=76.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--------------ccceEe
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------LKGVVA   71 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--------------~~~~~~   71 (332)
                      |||+||| +|.||..++..|+..|.       +|.++|+++  ++++..    .....+.              ..+++.
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~-------~V~~~D~~~--~~v~~l----~~g~~~i~e~gl~~~l~~~~~~~~l~~   68 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGA-------NVRCIDTDR--NKIEQL----NSGTIPIYEPGLEKMIARNVKAGRLRF   68 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHH----HHTCSCCCSTTHHHHHHHHHHTTSEEE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCC-------EEEEEECCH--HHHHHH----HcCCCcccCCCHHHHHHhhcccCcEEE
Confidence            6999999 79999999999998763       899999984  443322    2111110              235778


Q ss_pred             eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-Cccc
Q 020022           72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPAN  135 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~  135 (332)
                      +++..+++++||+||++.+.+..++.      ..++..+++.++.|.++..++.+|+..| .|.+
T Consensus        69 t~d~~ea~~~aDvViiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pg  127 (450)
T 3gg2_A           69 GTEIEQAVPEADIIFIAVGTPAGEDG------SADMSYVLDAARSIGRAMSRYILIVTKSTVPVG  127 (450)
T ss_dssp             ESCHHHHGGGCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTT
T ss_pred             ECCHHHHHhcCCEEEEEcCCCcccCC------CcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCc
Confidence            88888899999999999887754332      2345566777777777766666555554 3444

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.55  E-value=3.9e-07  Score=83.70  Aligned_cols=119  Identities=12%  Similarity=0.054  Sum_probs=76.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-----ccceEeeCChhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----LKGVVATTDAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-----~~~~~~~~~~~~a   78 (332)
                      +.++|.|+||+|++|++++..|+..|.       +|++++++.  +........+.+.....     ..++.-.....++
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   80 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGY-------KVRGTARSA--SKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEV   80 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCc--ccHHHHHHHhhccCCCceEEEEecCCcChHHHHHH
Confidence            347999999999999999999998763       789998864  22221111111100000     0011111234566


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      ++++|+||++||.... ..+..+.+..|+.....+.+.+.+.. ...++|++|..
T Consensus        81 ~~~~d~vih~A~~~~~-~~~~~~~~~~n~~g~~~ll~~~~~~~-~~~~iv~~SS~  133 (342)
T 1y1p_A           81 IKGAAGVAHIASVVSF-SNKYDEVVTPAIGGTLNALRAAAATP-SVKRFVLTSST  133 (342)
T ss_dssp             TTTCSEEEECCCCCSC-CSCHHHHHHHHHHHHHHHHHHHHTCT-TCCEEEEECCG
T ss_pred             HcCCCEEEEeCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhCC-CCcEEEEeccH
Confidence            7789999999987642 24566788899999999999887532 22467776643

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.55  E-value=2.8e-07  Score=83.94  Aligned_cols=166  Identities=14%  Similarity=0.135  Sum_probs=102.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||.|+||+|++|++++..|+..|  .     .+.+.+.+.  .....    +..........+.. .+..++++++|+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g--~-----~v~~~~~~~--~~~~~----~~~~~~~~~~Dl~~-~~~~~~~~~~d~v   67 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN--E-----IVVIDNLSS--GNEEF----VNEAARLVKADLAA-DDIKDYLKGAEEV   67 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS--C-----EEEECCCSS--CCGGG----SCTTEEEECCCTTT-SCCHHHHTTCSEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC--C-----EEEEEcCCC--CChhh----cCCCcEEEECcCCh-HHHHHHhcCCCEE
Confidence            589999999999999999998876  1     345544432  11110    00000000011111 3456788899999


Q ss_pred             EEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEechH
Q 020022           86 VMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCLTRL  159 (332)
Q Consensus        86 i~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~t~l  159 (332)
                      |++|+.+..  ...+..+.+..|+.....+++.+.+...  .++|++|.-. +...    ...+. ...++...++.+..
T Consensus        68 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~iv~~SS~~-vyg~~~~~~~~E~-~~~~~~~~Y~~sK~  143 (313)
T 3ehe_A           68 WHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGV--SRIVFTSTST-VYGEAKVIPTPED-YPTHPISLYGASKL  143 (313)
T ss_dssp             EECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTC--CEEEEECCGG-GGCSCSSSSBCTT-SCCCCCSHHHHHHH
T ss_pred             EECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC--CeEEEeCchH-HhCcCCCCCCCCC-CCCCCCCHHHHHHH
Confidence            999986532  2345677889999999999999988753  3566666421 1000    00000 01122234677778


Q ss_pred             HHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          160 DHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      ...++...+++..+++..-++...|+|...
T Consensus       144 ~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~  173 (313)
T 3ehe_A          144 ACEALIESYCHTFDMQAWIYRFANVIGRRS  173 (313)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECSCEESTTC
T ss_pred             HHHHHHHHHHHhcCCCEEEEeeccccCcCC
Confidence            778888888888898877778777778643

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.54  E-value=6.3e-07  Score=82.46  Aligned_cols=172  Identities=13%  Similarity=0.082  Sum_probs=103.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc----cceEeeCChhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL----KGVVATTDAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~----~~~~~~~~~~~al   79 (332)
                      +.|+|.|+||+|++|++++..|+..|.       +|+++|++..  .......++........    .++.-..+..+++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-------DVVIADNLVN--SKREAIARIEKITGKTPAFHETDVSDERALARIF   74 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECCCSS--SCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHH
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-------cEEEEecCCc--chHHHHHHHHhhcCCCceEEEeecCCHHHHHHHH
Confidence            457999999999999999999998763       7899998642  22222222222111000    0111111234555


Q ss_pred             C--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCC
Q 020022           80 T--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAK  151 (332)
Q Consensus        80 ~--~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~  151 (332)
                      +  ++|+||++||.....  .....+.+..|+.....+++.+++...  .++|++|.- .+...    .+.+. ...++.
T Consensus        75 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~iv~~SS~-~~~g~~~~~~~~e~-~~~~~~  150 (341)
T 3enk_A           75 DAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV--KRIVFSSSA-TVYGVPERSPIDET-FPLSAT  150 (341)
T ss_dssp             HHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEEEEG-GGBCSCSSSSBCTT-SCCBCS
T ss_pred             hccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCC--CEEEEEecc-eEecCCCCCCCCCC-CCCCCC
Confidence            5  899999999875311  123446778899999999999988753  356666531 11000    00000 011222


Q ss_pred             cEEEechHHHHHHHHHHHHHcC-CCCCCeeeeEEEecc
Q 020022          152 NITCLTRLDHNRALGQISEKLN-VQVSDVKNVIIWGNH  188 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~-v~~~~v~~~~v~G~h  188 (332)
                      ..++.++....++...+++..+ ++..-++...|+|.+
T Consensus       151 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          151 NPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAH  188 (341)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred             ChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCc
Confidence            3566777777788777887776 666667766677864

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=98.54  E-value=1.8e-07  Score=85.43  Aligned_cols=158  Identities=13%  Similarity=0.159  Sum_probs=99.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--C
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--G   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~   81 (332)
                      +.|||.|+||+|++|++++..|+..|.       ++++++++.        ..|+.+..           ...++++  +
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~-------~v~~~~r~~--------~~D~~d~~-----------~~~~~~~~~~   55 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGD-------VELVLRTRD--------ELNLLDSR-----------AVHDFFASER   55 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTT-------EEEECCCTT--------TCCTTCHH-----------HHHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-------eEEEEecCc--------cCCccCHH-----------HHHHHHHhcC
Confidence            457999999999999999999988653       677777542        12333221           2345566  8


Q ss_pred             CcEEEEeCCCCCCC---CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH---HHHHHhCC---CCCCC-
Q 020022           82 VNIAVMVGGFPRKE---GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA---LILKEFAP---SIPAK-  151 (332)
Q Consensus        82 aDiVi~~ag~~~~~---~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~---~~~~~~~~---~~~~~-  151 (332)
                      +|+||++|+.....   ..+..+.+..|+...+.+++.+.+...  .++|++|...-.-.   ..+.+...   ...+. 
T Consensus        56 ~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  133 (321)
T 1e6u_A           56 IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDV--NKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTN  133 (321)
T ss_dssp             CSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGG
T ss_pred             CCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEccHHHcCCCCCCCcCccccccCCCCCCC
Confidence            99999999865311   124456778899999999999988652  35666664321000   00000000   00111 


Q ss_pred             cEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      ..++.+.....++...+++..+++..-++...|+|...
T Consensus       134 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          134 EPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTC
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCC
Confidence            14556666666777777777788888888777788643

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=98.53  E-value=1.6e-07  Score=86.46  Aligned_cols=170  Identities=10%  Similarity=-0.030  Sum_probs=98.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-C----CccceEeeCChhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-P----LLKGVVATTDAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~----~~~~~~~~~~~~~a   78 (332)
                      +.+||.|+||+|++|++++..|+..|.       +|+++|+++.  ....  ..+..... .    ...++.......++
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   70 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGY-------EVYGADRRSG--EFAS--WRLKELGIENDVKIIHMDLLEFSNIIRT   70 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECSCCS--TTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEECCCc--cccc--ccHhhccccCceeEEECCCCCHHHHHHH
Confidence            346999999999999999999998763       7999998752  2211  11111100 0    00011011123345


Q ss_pred             cCC--CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCC
Q 020022           79 CTG--VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPA  150 (332)
Q Consensus        79 l~~--aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~  150 (332)
                      +++  .|+||++||.....  ..+....+..|+.....+++.+.+... ..++|++|... +...    .+.+. ...++
T Consensus        71 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~~iv~~SS~~-vyg~~~~~~~~e~-~~~~~  147 (345)
T 2z1m_A           71 IEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKP-DTKFYQASTSE-MFGKVQEIPQTEK-TPFYP  147 (345)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TCEEEEEEEGG-GGCSCSSSSBCTT-SCCCC
T ss_pred             HHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEEechh-hcCCCCCCCCCcc-CCCCC
Confidence            554  59999999975311  234566778899999999999887652 24666665421 1000    00000 11222


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      ...++.++....++...+++.++++....+.+.++|.
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp  184 (345)
T 2z1m_A          148 RSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESP  184 (345)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECT
T ss_pred             CChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCC
Confidence            3356677777778877788887876444443444553

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.52  E-value=1.6e-07  Score=80.57  Aligned_cols=112  Identities=22%  Similarity=0.205  Sum_probs=73.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh--hhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE--ALNGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~--~l~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      |+.+.+||.|+||+|++|++++..|+..+...     +|+++++++...  ..+-...|+.+.           .+..++
T Consensus         1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~-----~V~~~~r~~~~~~~~~~~~~~D~~~~-----------~~~~~~   64 (215)
T 2a35_A            1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLA-----KVIAPARKALAEHPRLDNPVGPLAEL-----------LPQLDG   64 (215)
T ss_dssp             ---CCCEEEEECTTSHHHHHHHHHHHHCTTCC-----EEECCBSSCCCCCTTEECCBSCHHHH-----------GGGCCS
T ss_pred             CCCCCceEEEECCCcHHHHHHHHHHHhCCCCC-----eEEEEeCCCcccCCCceEEeccccCH-----------HHHHHh
Confidence            65556799999999999999999999876322     688888875210  000011222221           122333


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +  +|+||+++|.......+..+.+..|+.....+++.+.+...  .++|++|.
T Consensus        65 ~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss  114 (215)
T 2a35_A           65 S--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGA--RHYLVVSA  114 (215)
T ss_dssp             C--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTC--CEEEEECC
T ss_pred             h--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCC--CEEEEECC
Confidence            4  89999999875432345667788899999999999888653  35666664

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=98.52  E-value=7.4e-07  Score=86.30  Aligned_cols=119  Identities=13%  Similarity=0.083  Sum_probs=76.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC----------------c
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL----------------L   66 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~----------------~   66 (332)
                      +.|||+||| +|.||..+|..|+.. |. .     +++++|+++  ++..+.+..+.....+.                .
T Consensus        17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~-~-----~V~~~D~~~--~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~   87 (478)
T 3g79_A           17 PIKKIGVLG-MGYVGIPAAVLFADAPCF-E-----KVLGFQRNS--KSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKA   87 (478)
T ss_dssp             SCCEEEEEC-CSTTHHHHHHHHHHSTTC-C-----EEEEECCCC--TTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHhCCC-C-----eEEEEECCh--hHhHHHHHHHHhcCCCccccCCCHHHHHHhhccc
Confidence            457999999 799999999999987 52 1     699999985  31111222232221111                2


Q ss_pred             cceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-Ccccc
Q 020022           67 KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANT  136 (332)
Q Consensus        67 ~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~  136 (332)
                      .++..+++ .+++++||+||++.+.+...+.++    ..++..++...+.|.++..++.+||..| -|.+.
T Consensus        88 g~l~~ttd-~ea~~~aDvViiaVptp~~~~~~~----~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgt  153 (478)
T 3g79_A           88 GKFECTPD-FSRISELDAVTLAIQTPFANPKDL----EPDFSALIDGIRNVGKYLKPGMLVVLESTITPGT  153 (478)
T ss_dssp             TCEEEESC-GGGGGGCSEEEECCCCCCCSSCCS----SCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTT
T ss_pred             CCeEEeCc-HHHHhcCCEEEEecCCchhccCCc----cccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHH
Confidence            45778887 789999999999988776433210    1234455566666766665666555543 35443

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=98.52  E-value=5.7e-07  Score=87.49  Aligned_cols=124  Identities=17%  Similarity=0.213  Sum_probs=77.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH--------HHhhhhc-CCccceEeeCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM--------ELVDAAF-PLLKGVVATTD   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~--------dl~~~~~-~~~~~~~~~~~   74 (332)
                      ++|||+||| +|.||..++..|+..+. +    .+|+++|+++  ++++....        ++.+... ....+++.+++
T Consensus         8 ~~mkI~VIG-~G~vG~~~A~~La~~g~-g----~~V~~~D~~~--~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~   79 (481)
T 2o3j_A            8 KVSKVVCVG-AGYVGGPTCAMIAHKCP-H----ITVTVVDMNT--AKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSD   79 (481)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHHHCT-T----SEEEEECSCH--HHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcCC-C----CEEEEEECCH--HHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECC
Confidence            457999999 79999999999998631 1    1799999984  44432211        0100000 00124677778


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccc
Q 020022           75 AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANT  136 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~  136 (332)
                      ..+++++||+||++.+.|.+.+.++.+ ...++..+++.++.|.++..++.+|+.. |+|.+.
T Consensus        80 ~~~~~~~aDvvii~Vptp~~~~g~~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt  141 (481)
T 2o3j_A           80 IPKAIAEADLIFISVNTPTKMYGRGKG-MAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKA  141 (481)
T ss_dssp             HHHHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTH
T ss_pred             HHHHhhcCCEEEEecCCcccccccccc-CCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCH
Confidence            778899999999998877543322111 1223445666777777776666655443 677664

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.51  E-value=1.3e-07  Score=87.13  Aligned_cols=170  Identities=12%  Similarity=0.087  Sum_probs=102.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe----eCChhhhcCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA----TTDAVEACTG   81 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~----~~~~~~al~~   81 (332)
                      |||.|+||+|++|++++..|+..|.       +|+++|+... .........+...  ....-+..    .....+++++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~-~~~~~~~~~l~~~--~~~~~~~~Dl~d~~~~~~~~~~   71 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGI-------DLIVFDNLSR-KGATDNLHWLSSL--GNFEFVHGDIRNKNDVTRLITK   71 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCS-TTHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHH
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCC-------EEEEEeCCCc-cCchhhhhhhccC--CceEEEEcCCCCHHHHHHHHhc
Confidence            5899999999999999999998763       7899987421 1111111122211  00000111    1123456677


Q ss_pred             --CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH-----------------
Q 020022           82 --VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI-----------------  140 (332)
Q Consensus        82 --aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~-----------------  140 (332)
                        +|+||++||.....  ..+..+.+..|+.....+++.+.+... ..++|++|... +....                 
T Consensus        72 ~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~~~iv~~SS~~-v~g~~~~~~~~e~~~~~~~~~~  149 (347)
T 1orr_A           72 YMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNS-NCNIIYSSTNK-VYGDLEQYKYNETETRYTCVDK  149 (347)
T ss_dssp             HCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEEGG-GGTTCTTSCEEECSSCEEETTC
T ss_pred             cCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEeccHH-HhCCCCcCCccccccccccccc
Confidence              99999999865311  124456778999999999999998863 34676666422 10000                 


Q ss_pred             ---HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          141 ---LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       141 ---~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                         +.+. ...++...++.++....++...+++..|++..-++...|+|..
T Consensus       150 ~~~~~e~-~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~  199 (347)
T 1orr_A          150 PNGYDES-TQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGR  199 (347)
T ss_dssp             TTCBCTT-SCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred             ccCcccc-CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcC
Confidence               0000 0112223466677777788777888778877777766677753

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.51  E-value=1.7e-06  Score=79.73  Aligned_cols=167  Identities=11%  Similarity=0.008  Sum_probs=100.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC-hhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD-AVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~-~~~al~~   81 (332)
                      +++||.|+||+|++|++++..|+..|.       +|+++|++... ...    .+.+...  ..++.. ..| ...++.+
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~-~~~----~~~~~~~--~~~~~~~~~D~~~~~~~~   91 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGH-------EVTVVDNFFTG-RKR----NVEHWIG--HENFELINHDVVEPLYIE   91 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSC-CGG----GTGGGTT--CTTEEEEECCTTSCCCCC
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCC-------EEEEEeCCCcc-chh----hhhhhcc--CCceEEEeCccCChhhcC
Confidence            457999999999999999999998763       78899876321 111    1111100  011221 112 2345788


Q ss_pred             CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhC----CCCCCC
Q 020022           82 VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFA----PSIPAK  151 (332)
Q Consensus        82 aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~----~~~~~~  151 (332)
                      +|+||++||.....  ..+..+.+..|+.....+++.+.+..   .++|++|.. .+...    ...+..    ...++.
T Consensus        92 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~---~~~v~~SS~-~v~g~~~~~~~~E~~~~~~~~~~~~  167 (343)
T 2b69_A           92 VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG---ARLLLASTS-EVYGDPEVHPQSEDYWGHVNPIGPR  167 (343)
T ss_dssp             CSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT---CEEEEEEEG-GGGBSCSSSSBCTTCCCBCCSSSTT
T ss_pred             CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC---CcEEEECcH-HHhCCCCCCCCcccccccCCCCCCC
Confidence            99999999865321  23455677889999999999998864   256666532 11000    000000    001112


Q ss_pred             cEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      ..++.+.....++...+++..+++..-++...|+|..
T Consensus       168 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~  204 (343)
T 2b69_A          168 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR  204 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcC
Confidence            2456677777777777777778887777766667853

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.49  E-value=1e-06  Score=79.66  Aligned_cols=100  Identities=21%  Similarity=0.286  Sum_probs=68.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||.|+||+||||++++..|+..|.       +|+.+.+++......   .|               ....++++++|.|
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~-------~V~~l~R~~~~~~~~---~~---------------~~~~~~l~~~d~v   55 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGH-------EVTLVSRKPGPGRIT---WD---------------ELAASGLPSCDAA   55 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCCTTEEE---HH---------------HHHHHCCCSCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCCCcCeee---cc---------------hhhHhhccCCCEE
Confidence            6999999999999999999998863       788888764221111   11               1124567899999


Q ss_pred             EEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe
Q 020022           86 VMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVV  130 (332)
Q Consensus        86 i~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~  130 (332)
                      |++||.+....   .+   ..++...|+...+.+.+.+.+...+..+++..
T Consensus        56 ihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~  106 (298)
T 4b4o_A           56 VNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLV  106 (298)
T ss_dssp             EECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEE
T ss_pred             EEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence            99988542111   11   34566788999999999888776443334433

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=98.48  E-value=3.1e-07  Score=78.96  Aligned_cols=103  Identities=17%  Similarity=0.171  Sum_probs=68.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||.|+||+|++|++++..|+..|.       +|+++++++  +.+..    +.........++.- .+. +++.++|+|
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~--~~~~~----~~~~~~~~~~D~~d-~~~-~~~~~~d~v   65 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGH-------EVTAIVRNA--GKITQ----THKDINILQKDIFD-LTL-SDLSDQNVV   65 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCS--HHHHH----HCSSSEEEECCGGG-CCH-HHHTTCSEE
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-------EEEEEEcCc--hhhhh----ccCCCeEEeccccC-hhh-hhhcCCCEE
Confidence            5899999999999999999998763       799999875  22221    11000000000000 112 788999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |+++|.+...       ...|+...+.+++.+++..  ..+++++|.
T Consensus        66 i~~ag~~~~~-------~~~~~~~~~~l~~a~~~~~--~~~~v~~SS  103 (221)
T 3ew7_A           66 VDAYGISPDE-------AEKHVTSLDHLISVLNGTV--SPRLLVVGG  103 (221)
T ss_dssp             EECCCSSTTT-------TTSHHHHHHHHHHHHCSCC--SSEEEEECC
T ss_pred             EECCcCCccc-------cchHHHHHHHHHHHHHhcC--CceEEEEec
Confidence            9999986421       2458888899999988764  245666664

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=98.47  E-value=2.5e-07  Score=84.78  Aligned_cols=167  Identities=13%  Similarity=0.069  Sum_probs=99.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--CCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~aD   83 (332)
                      |||.|+||+|++|++++..|+..|.       +|+++|++...  ..   ..+.........++.-.....++++  ++|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d   69 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGL-------SVVVVDNLQTG--HE---DAITEGAKFYNGDLRDKAFLRDVFTQENIE   69 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSC--CG---GGSCTTSEEEECCTTCHHHHHHHHHHSCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-------EEEEEeCCCcC--ch---hhcCCCcEEEECCCCCHHHHHHHHhhcCCC
Confidence            6899999999999999999998763       78888876421  11   0111000000000000112345566  899


Q ss_pred             EEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEec
Q 020022           84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCLT  157 (332)
Q Consensus        84 iVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~t  157 (332)
                      +||++||.....  ..+..+.+..|+.....+++.+.+...  .++|++|.. .+...    .+.+. .-.++...++.+
T Consensus        70 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~v~~Ss~-~~~~~~~~~~~~E~-~~~~~~~~Y~~s  145 (330)
T 2c20_A           70 AVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKV--DKFIFSSTA-ATYGEVDVDLITEE-TMTNPTNTYGET  145 (330)
T ss_dssp             EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEECCG-GGGCSCSSSSBCTT-SCCCCSSHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCC--CEEEEeCCc-eeeCCCCCCCCCcC-CCCCCCChHHHH
Confidence            999999865311  123456778899999999999887642  356666642 11000    00000 001122345667


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      +....++...+++..+++..-++...|+|..
T Consensus       146 K~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          146 KLAIEKMLHWYSQASNLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             HHHHHHHHHHHHHTSSCEEEEEECSEEECCC
T ss_pred             HHHHHHHHHHHHHHhCCcEEEEecCcccCCC
Confidence            7777777777777778877777766677864

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=98.47  E-value=2.1e-07  Score=82.90  Aligned_cols=109  Identities=17%  Similarity=0.210  Sum_probs=73.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ++||.|+||+|++|++++..|+..|.       +|+++++++.. .+..      ... ....++.-.....++++++|+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~-~~~~------~~~-~~~~Dl~d~~~~~~~~~~~d~   66 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAH-------EVRLSDIVDLG-AAEA------HEE-IVACDLADAQAVHDLVKDCDG   66 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEE-------EEEECCSSCCC-CCCT------TEE-ECCCCTTCHHHHHHHHTTCSE
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCC-------EEEEEeCCCcc-ccCC------Ccc-EEEccCCCHHHHHHHHcCCCE
Confidence            35899999999999999999988763       79999987521 1110      000 000011111234567889999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ||++||..  ...+....+..|+.....+++.+.+...  .++|++|.
T Consensus        67 vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~iv~~SS  110 (267)
T 3ay3_A           67 IIHLGGVS--VERPWNDILQANIIGAYNLYEAARNLGK--PRIVFASS  110 (267)
T ss_dssp             EEECCSCC--SCCCHHHHHHHTHHHHHHHHHHHHHTTC--CEEEEEEE
T ss_pred             EEECCcCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeCC
Confidence            99999876  2345567788999999999999887642  35666654

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=98.46  E-value=2.2e-07  Score=86.20  Aligned_cols=169  Identities=11%  Similarity=0.088  Sum_probs=101.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-e------CChhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-T------TDAVE   77 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~------~~~~~   77 (332)
                      |||.|+||+|++|++++..|+.. +.       +|+++|++.....+.. ..++..     ..++.. .      ....+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~-------~V~~~~r~~~~~~~~~-~~~~~~-----~~~~~~~~~Dl~d~~~~~~   67 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQD-------TVVNIDKLTYAGNLES-LSDISE-----SNRYNFEHADICDSAEITR   67 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC-------EEEEEECCCTTCCGGG-GTTTTT-----CTTEEEEECCTTCHHHHHH
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCC-------eEEEEecCCCCCchhh-hhhhhc-----CCCeEEEECCCCCHHHHHH
Confidence            48999999999999999999886 32       7888887531111111 011111     011111 1      12334


Q ss_pred             hcC--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhh--cCC-----CeEEEEecCcccchHH-------
Q 020022           78 ACT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQH--AAP-----NCKVLVVANPANTNAL-------  139 (332)
Q Consensus        78 al~--~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~--~~~-----~~~viv~tNP~~~~~~-------  139 (332)
                      +++  ++|+||++||.....  ..+..+.+..|+.....+++.+.+.  ..+     .++||++|... +...       
T Consensus        68 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~-v~g~~~~~~~~  146 (361)
T 1kew_A           68 IFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE-VYGDLPHPDEV  146 (361)
T ss_dssp             HHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG-GGCCCCCGGGS
T ss_pred             HHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHH-HhCCCcccccc
Confidence            565  899999999875310  1233567788999999999988876  322     12666666321 1000       


Q ss_pred             -------HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          140 -------ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       140 -------~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                             .+.+. ...++...++.++....++...+++.++++..-++...|+|...
T Consensus       147 ~~~~~~~~~~E~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          147 ENSVTLPLFTET-TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             CTTSCCCCBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred             cccccCCCCCCC-CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCC
Confidence                   00000 01122335677777777887778888898888888777778643

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=98.45  E-value=9.3e-07  Score=80.58  Aligned_cols=174  Identities=11%  Similarity=0.020  Sum_probs=93.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeC-CCch-hhhhhhHHHHhh--hhc-CCccceEeeCChhhhcC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI-PPAA-EALNGVKMELVD--AAF-PLLKGVVATTDAVEACT   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~-~~~~-~~l~~~~~dl~~--~~~-~~~~~~~~~~~~~~al~   80 (332)
                      +||.|+||+|++|++++..|+..|.       +|+.+++ ++.. +.... ..++..  ... ....++.-.....++++
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   73 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGY-------SVNTTIRADPERKRDVSF-LTNLPGASEKLHFFNADLSNPDSFAAAIE   73 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-------EEEEECCCC----CCCHH-HHTSTTHHHHEEECCCCTTCGGGGHHHHT
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCC-------EEEEEEeCCccchhHHHH-HHhhhccCCceEEEecCCCCHHHHHHHHc
Confidence            5899999999999999999998763       6887776 4210 11110 011110  000 00011111223567789


Q ss_pred             CCcEEEEeCCCCCCCCCC-HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH--hC-CCC--------
Q 020022           81 GVNIAVMVGGFPRKEGME-RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE--FA-PSI--------  148 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~-r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~--~~-~~~--------  148 (332)
                      ++|+||++|+.......+ ..+.+..|+.....+++.+.+.. .-.++|++|........--..  +. ...        
T Consensus        74 ~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  152 (322)
T 2p4h_X           74 GCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSK-TVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRS  152 (322)
T ss_dssp             TCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCS-SCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHH
T ss_pred             CCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccHHHcccCCCCCeecCCccccchhhhcc
Confidence            999999999643111111 23477889999999999888762 123566665322110000000  00 000        


Q ss_pred             -CCCc-EEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          149 -PAKN-ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       149 -~~~~-i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                       .+.. .++.++....++...+++..|++..-++...|+|..
T Consensus       153 ~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~  194 (322)
T 2p4h_X          153 VKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRF  194 (322)
T ss_dssp             HCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCC
T ss_pred             cCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCC
Confidence             0011 245555555566666666678877777776777764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=98.45  E-value=2e-07  Score=83.90  Aligned_cols=153  Identities=15%  Similarity=0.109  Sum_probs=87.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc-
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-   79 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al-   79 (332)
                      |+.+.++|.|+||+|++|++++..|+..|.       +|++.|++.  +.++....++.........++....+..+++ 
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~   71 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGD-------TVIGTARRT--EALDDLVAAYPDRAEAISLDVTDGERIDVVAA   71 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSG--GGGHHHHHHCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhccCCceEEEeeCCCHHHHHHHHH
Confidence            766778999999999999999999998873       789999874  3333221111100000000000000112222 


Q ss_pred             ------CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           80 ------TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        80 ------~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                            .+.|+||+.||.....   ..+.   ...+..|+..    .+.+.+.+++..  .+.||++|.....       
T Consensus        72 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~-------  142 (281)
T 3m1a_A           72 DVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG--SGSVVNISSFGGQ-------  142 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT-------
T ss_pred             HHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEEcCcccc-------
Confidence                  3789999999974321   2232   3456677776    777777777764  3567777754321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                        .+.+....++.++.....+-+.+++.+.
T Consensus       143 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~  170 (281)
T 3m1a_A          143 --LSFAGFSAYSATKAALEQLSEGLADEVA  170 (281)
T ss_dssp             --CCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence              1233333456666666677777777753

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=98.44  E-value=3.8e-07  Score=85.84  Aligned_cols=172  Identities=17%  Similarity=0.129  Sum_probs=100.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHH-hcccCCCCCceEEEEEeCCCchhh-------hhhhHHHHhhhhcCC-ccc---eE-ee
Q 020022            6 VRVLVTGAAGQIGYALVPMIA-RGVMLGTDQPVILHMLDIPPAAEA-------LNGVKMELVDAAFPL-LKG---VV-AT   72 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~-------l~~~~~dl~~~~~~~-~~~---~~-~~   72 (332)
                      |+|.|+||+|++|++++..|+ ..|.       +|+++|+......       .......+.+..... ..+   +. +.
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNH-------SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEV   75 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCC-------EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCC-------EEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEE
Confidence            589999999999999999999 7663       7889987642110       111100011110000 001   11 11


Q ss_pred             CC------hhhhcC--C-CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH-
Q 020022           73 TD------AVEACT--G-VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI-  140 (332)
Q Consensus        73 ~~------~~~al~--~-aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~-  140 (332)
                      .|      ..++++  + +|+||++||.....  ..+..+.+..|+.....+++.+.+.. . .++|++|. ..+.... 
T Consensus        76 ~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~-~~iv~~SS-~~v~g~~~  152 (397)
T 1gy8_A           76 GDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-C-DKIIFSSS-AAIFGNPT  152 (397)
T ss_dssp             SCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-C-CEEEEEEE-GGGTBSCC
T ss_pred             CCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-C-CEEEEECC-HHHhCCCC
Confidence            11      234555  6 99999999875321  12445678899999999999988764 2 35666653 2110000 


Q ss_pred             ----------HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          141 ----------LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       141 ----------~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                                +.+. .-..+...++.++....++...+++.++++..-++...|+|.+
T Consensus       153 ~~~~~~~~~~~~E~-~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          153 MGSVSTNAEPIDIN-AKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAH  209 (397)
T ss_dssp             C-----CCCCBCTT-SCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCC
T ss_pred             cccccccccCcCcc-CCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCC
Confidence                      0000 0001123466677777788778888888887777877778864

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=98.43  E-value=2.2e-07  Score=80.29  Aligned_cols=105  Identities=11%  Similarity=0.168  Sum_probs=69.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~~~~al~~aDi   84 (332)
                      |||.|+||+|++|++++..|+..|.       +|+++++++  +.+...    .... ....++.. ..+..++++++|+
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~R~~--~~~~~~----~~~~-~~~~D~~d~~~~~~~~~~~~d~   66 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDY-------QIYAGARKV--EQVPQY----NNVK-AVHFDVDWTPEEMAKQLHGMDA   66 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSC-------EEEEEESSG--GGSCCC----TTEE-EEECCTTSCHHHHHTTTTTCSE
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCc--cchhhc----CCce-EEEecccCCHHHHHHHHcCCCE
Confidence            4899999999999999999998763       799999875  222211    0000 00001101 1234677889999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ||+++|.....      .+..|+.....+++.+++...  .++|++|.
T Consensus        67 vi~~ag~~~~~------~~~~n~~~~~~l~~a~~~~~~--~~iv~~SS  106 (219)
T 3dqp_A           67 IINVSGSGGKS------LLKVDLYGAVKLMQAAEKAEV--KRFILLST  106 (219)
T ss_dssp             EEECCCCTTSS------CCCCCCHHHHHHHHHHHHTTC--CEEEEECC
T ss_pred             EEECCcCCCCC------cEeEeHHHHHHHHHHHHHhCC--CEEEEECc
Confidence            99999976422      345677888888888887653  35666664

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=98.43  E-value=4.3e-07  Score=83.54  Aligned_cols=170  Identities=14%  Similarity=0.049  Sum_probs=100.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc---ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-e------CCh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG---VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-T------TDA   75 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~---~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~------~~~   75 (332)
                      |||.|+||+|++|++++..|+..   +..    ..+|+++|+........ ...++..     ..++.. .      ...
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~----~~~V~~~~r~~~~~~~~-~~~~~~~-----~~~~~~~~~Dl~d~~~~   70 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVP----ADEVIVLDSLTYAGNRA-NLAPVDA-----DPRLRFVHGDIRDAGLL   70 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSC----CSEEEEEECCCTTCCGG-GGGGGTT-----CTTEEEEECCTTCHHHH
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCC----ceEEEEEECCCccCchh-hhhhccc-----CCCeEEEEcCCCCHHHH
Confidence            48999999999999999999884   310    01788888753111111 0011110     011111 1      123


Q ss_pred             hhhcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc--h-HHHHHHhCCCCCC
Q 020022           76 VEACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT--N-ALILKEFAPSIPA  150 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~--~-~~~~~~~~~~~~~  150 (332)
                      .+++.++|+||++||.....  ..+..+.+..|+.....+++.+.+...  .++|++|...-.  . ...+.+. ...++
T Consensus        71 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~--~~~v~~SS~~vyg~~~~~~~~E~-~~~~~  147 (337)
T 1r6d_A           71 ARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV--GRVVHVSTNQVYGSIDSGSWTES-SPLEP  147 (337)
T ss_dssp             HHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTC--CEEEEEEEGGGGCCCSSSCBCTT-SCCCC
T ss_pred             HHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEecchHHhCCCCCCCCCCC-CCCCC
Confidence            46678999999999865311  013346778899999999999988752  356666532100  0 0000000 01122


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      ...++.++....++...+++..+++..-++...|+|..
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~  185 (337)
T 1r6d_A          148 NSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPY  185 (337)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCC
Confidence            23466677777777777777788887777776677854

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=98.43  E-value=2.6e-07  Score=85.14  Aligned_cols=179  Identities=12%  Similarity=0.055  Sum_probs=96.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhc-CC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEAC-TG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al-~~   81 (332)
                      +.|+|.|+||+|++|++++..|+..|........+|+++|++..  ....    ...... ....++.-.....+++ .+
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~--~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~   86 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQP--EAPA----GFSGAVDARAADLSAPGEAEKLVEAR   86 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCC--CCCT----TCCSEEEEEECCTTSTTHHHHHHHTC
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCC--cccc----ccCCceeEEEcCCCCHHHHHHHHhcC
Confidence            45799999999999999999999876100000017889998742  1110    000000 0000000011234456 48


Q ss_pred             CcEEEEeCCCCCCC-CCCHHHHHHhhHHHHHHHHHHHHhhcC---CCeEEEEecCcccchH--H-HHHHhCCCCCCCcEE
Q 020022           82 VNIAVMVGGFPRKE-GMERKDVMSKNVSIYKAQASALEQHAA---PNCKVLVVANPANTNA--L-ILKEFAPSIPAKNIT  154 (332)
Q Consensus        82 aDiVi~~ag~~~~~-~~~r~~~~~~n~~i~~~i~~~i~~~~~---~~~~viv~tNP~~~~~--~-~~~~~~~~~~~~~i~  154 (332)
                      +|+||++||..... ..+..+.+..|+.....+++.+.+...   +..++|++|...-.-.  . .+.+. .-..+...+
T Consensus        87 ~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-~~~~~~~~Y  165 (342)
T 2hrz_A           87 PDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE-FHTTPLTSY  165 (342)
T ss_dssp             CSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT-CCCCCSSHH
T ss_pred             CCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC-CCCCCcchH
Confidence            99999999865310 123456678899999999988887640   0135666653211000  0 00000 000122345


Q ss_pred             EechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          155 CLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       155 ~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      +.++....++...+++..+++...++...|+|..|
T Consensus       166 ~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg  200 (342)
T 2hrz_A          166 GTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPG  200 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCS
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCC
Confidence            66777777777777776666655566444555333

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=98.43  E-value=2.4e-07  Score=84.15  Aligned_cols=165  Identities=10%  Similarity=0.074  Sum_probs=98.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc--ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--C
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG--VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--G   81 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~   81 (332)
                      |||.|+||+|++|++++..|+..  +.       +|+++|++.....+      ...... ...++.-.....++++  +
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~~~~~~~------~~~~~~-~~~D~~d~~~~~~~~~~~~   68 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTE-------NVIASDIRKLNTDV------VNSGPF-EVVNALDFNQIEHLVEVHK   68 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGG-------GEEEEESCCCSCHH------HHSSCE-EECCTTCHHHHHHHHHHTT
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCC-------EEEEEcCCCccccc------cCCCce-EEecCCCHHHHHHHHhhcC
Confidence            68999999999999999999886  53       68888886421110      001000 0000000112345566  8


Q ss_pred             CcEEEEeCCCCCCC-CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEe
Q 020022           82 VNIAVMVGGFPRKE-GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCL  156 (332)
Q Consensus        82 aDiVi~~ag~~~~~-~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~  156 (332)
                      +|+||++||..... ..+..+.+..|+.....+.+.+.+...  .++|++|...-.-..    ...+. .-..+...++.
T Consensus        69 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~e~-~~~~~~~~Y~~  145 (312)
T 2yy7_A           69 ITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKI--KKIFWPSSIAVFGPTTPKENTPQY-TIMEPSTVYGI  145 (312)
T ss_dssp             CCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSC--SEEECCEEGGGCCTTSCSSSBCSS-CBCCCCSHHHH
T ss_pred             CCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCC--CEEEEeccHHHhCCCCCCCCcccc-CcCCCCchhHH
Confidence            99999999864311 124556778899999999999887642  256665532110000    00000 00112234666


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      ++....++...+++..+++..-++...|+|.
T Consensus       146 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~  176 (312)
T 2yy7_A          146 SKQAGERWCEYYHNIYGVDVRSIRYPGLISW  176 (312)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEECEEECEEECS
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEeCCeEecC
Confidence            7777777777777777888888886667784

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.42  E-value=1.9e-06  Score=78.02  Aligned_cols=165  Identities=17%  Similarity=0.179  Sum_probs=100.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC-----
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG-----   81 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~-----   81 (332)
                      ||.|+||+|++|++++..|+..|..      +|+++++.+.....    ..+....  ....+.......+++++     
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~------~V~~~~r~~~~~~~----~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~   68 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGIT------DILVVDNLKDGTKF----VNLVDLN--IADYMDKEDFLIQIMAGEEFGD   68 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCC------CEEEEECCSSGGGG----HHHHTSC--CSEEEEHHHHHHHHHTTCCCSS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCc------EEEEEccCCCCchh----hhcCcce--eccccccHHHHHHHHhccccCC
Confidence            5899999999999999999987621      68888886422111    1111110  11111111223455654     


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEec
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCLT  157 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~t  157 (332)
                      +|+||++||.......+..+.+..|+...+.+++.+.+.. .  ++|++|... +...    ...+. .-..+...++.+
T Consensus        69 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~--~~v~~SS~~-v~g~~~~~~~~E~-~~~~p~~~Y~~s  143 (310)
T 1eq2_A           69 VEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I--PFLYASSAA-TYGGRTSDFIESR-EYEKPLNVYGYS  143 (310)
T ss_dssp             CCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C--CEEEEEEGG-GGTTCCSCBCSSG-GGCCCSSHHHHH
T ss_pred             CcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEeeHH-HhCCCCCCCCCCC-CCCCCCChhHHH
Confidence            9999999987654344567788999999999999998875 2  566665421 1000    00000 000112245666


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      +....++...+++..|++..-++...|+|..
T Consensus       144 K~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~  174 (310)
T 1eq2_A          144 KFLFDEYVRQILPEANSQIVGFRYFNVYGPR  174 (310)
T ss_dssp             HHHHHHHHHHHGGGCSSCEEEEEECEEESSS
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeCCcEECcC
Confidence            7777777777777778877777766667753

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.42  E-value=9.9e-07  Score=80.19  Aligned_cols=167  Identities=14%  Similarity=0.034  Sum_probs=97.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +++||.|+||+|++|++++..|+..|.       +|+.++++....  .+....+.+...  ..++   .-....+.++|
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~--~~~~~~~~~~~~--~~~~---~~~~~Dl~~~d   71 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGE-------EVTVLDDLRVPP--MIPPEGTGKFLE--KPVL---ELEERDLSDVR   71 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-------CEEEECCCSSCC--SSCCTTSSEEEC--SCGG---GCCHHHHTTEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCC-------EEEEEecCCccc--ccchhhhhhhcc--CCCe---eEEeCccccCC
Confidence            367999999999999999999998763       688888864210  000001111000  0011   11223455999


Q ss_pred             EEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEec
Q 020022           84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCLT  157 (332)
Q Consensus        84 iVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~t  157 (332)
                      +||++|+.....  ..+..+.+. |+...+.+++.+.+...  .++|++|... +...    ...+. ....+...++.+
T Consensus        72 ~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v--~~~v~~SS~~-v~~~~~~~~~~E~-~~~~p~~~Y~~s  146 (321)
T 3vps_A           72 LVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGV--PKVVVGSTCE-VYGQADTLPTPED-SPLSPRSPYAAS  146 (321)
T ss_dssp             EEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTC--CEEEEEEEGG-GGCSCSSSSBCTT-SCCCCCSHHHHH
T ss_pred             EEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCC--CeEEEecCHH-HhCCCCCCCCCCC-CCCCCCChhHHH
Confidence            999999865310  111223445 99999999999998863  3566655321 1000    00000 011222346667


Q ss_pred             hHHHHHHHHHHHHHcCC-CCCCeeeeEEEeccC
Q 020022          158 RLDHNRALGQISEKLNV-QVSDVKNVIIWGNHS  189 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v-~~~~v~~~~v~G~hg  189 (332)
                      +....++...+++..++ +..-++...|+|...
T Consensus       147 K~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~  179 (321)
T 3vps_A          147 KVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGE  179 (321)
T ss_dssp             HHHHHHHHHHHHHSSSSCEEEEEEECEEECTTC
T ss_pred             HHHHHHHHHHHHHHcCCCceEEEEeccccCcCC
Confidence            77777887888887787 666777666778543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=98.42  E-value=1e-06  Score=74.78  Aligned_cols=107  Identities=14%  Similarity=0.157  Sum_probs=68.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |||.|+||+|++|++++..|+..|.       +++++++++  +.+..    +..... ....++.-..+..++++++|+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-------~V~~~~r~~--~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~d~   70 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-------EVTVLVRDS--SRLPS----EGPRPAHVVVGDVLQAADVDKTVAGQDA   70 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCG--GGSCS----SSCCCSEEEESCTTSHHHHHHHHTTCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEEeCh--hhccc----ccCCceEEEEecCCCHHHHHHHHcCCCE
Confidence            7999999999999999999998763       799999874  22211    000000 000000011134577889999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ||+++|.......     ...|+...+.+++.+.+...  .++|++|.
T Consensus        71 vi~~a~~~~~~~~-----~~~n~~~~~~~~~~~~~~~~--~~~v~~Ss  111 (206)
T 1hdo_A           71 VIVLLGTRNDLSP-----TTVMSEGARNIVAAMKAHGV--DKVVACTS  111 (206)
T ss_dssp             EEECCCCTTCCSC-----CCHHHHHHHHHHHHHHHHTC--CEEEEECC
T ss_pred             EEECccCCCCCCc-----cchHHHHHHHHHHHHHHhCC--CeEEEEee
Confidence            9999986543111     13577888888888887653  35666664

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=98.42  E-value=1.7e-06  Score=83.10  Aligned_cols=115  Identities=14%  Similarity=0.149  Sum_probs=72.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH--------HhhhhcC--CccceEeeCCh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME--------LVDAAFP--LLKGVVATTDA   75 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d--------l~~~~~~--~~~~~~~~~~~   75 (332)
                      |||+||| +|.||..++..|+..|.       ++.++|+++  ++++.....        +.+....  ...++..+++.
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~-------~V~~~d~~~--~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~   70 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGH-------EVIGVDVSS--TKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDF   70 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCH
Confidence            4899999 79999999999998763       799999974  333322110        0000000  01246777888


Q ss_pred             hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCC---CeEEEEe-cCcccc
Q 020022           76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP---NCKVLVV-ANPANT  136 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~---~~~viv~-tNP~~~  136 (332)
                      .+++++||+||++.+.+......      .++..+++.++.+.++..+   +.+|+.. |+|.+.
T Consensus        71 ~~~~~~aDvviiaVptp~~~~~~------~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~  129 (436)
T 1mv8_A           71 KKAVLDSDVSFICVGTPSKKNGD------LDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGT  129 (436)
T ss_dssp             HHHHHTCSEEEECCCCCBCTTSS------BCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTH
T ss_pred             HHHhccCCEEEEEcCCCcccCCC------cchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCc
Confidence            88899999999998776532211      2333444555566555444   5555554 677654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=98.42  E-value=2.5e-07  Score=85.89  Aligned_cols=171  Identities=13%  Similarity=0.038  Sum_probs=100.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee----CChhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT----TDAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~----~~~~~al   79 (332)
                      +.|+|.|+||+|++|++++..|+..|.       +|++++++..  ........+...  ....-+...    ....+++
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~   76 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGA-------TVKGYSLTAP--TVPSLFETARVA--DGMQSEIGDIRDQNKLLESI   76 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCS--SSSCHHHHTTTT--TTSEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCC-------eEEEEeCCCc--ccchhhHhhccC--CceEEEEccccCHHHHHHHH
Confidence            357999999999999999999998763       7899998742  221111111100  000001111    1233455


Q ss_pred             CC--CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH-----HHHHhCCCCCC
Q 020022           80 TG--VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL-----ILKEFAPSIPA  150 (332)
Q Consensus        80 ~~--aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~-----~~~~~~~~~~~  150 (332)
                      ++  +|+||++||.+...  ..+..+.+..|+.....+++.+.+.. ...++|++|... +...     ...+. ...++
T Consensus        77 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~-vyg~~~~~~~~~E~-~~~~~  153 (357)
T 1rkx_A           77 REFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNITSDK-CYDNKEWIWGYREN-EAMGG  153 (357)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEECCGG-GBCCCCSSSCBCTT-SCBCC
T ss_pred             HhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEecCHH-HhCCCCcCCCCCCC-CCCCC
Confidence            55  89999999864211  12345677889999999999988864 224666666421 1000     00000 01122


Q ss_pred             CcEEEechHHHHHHHHHHHHHc---------CCCCCCeeeeEEEecc
Q 020022          151 KNITCLTRLDHNRALGQISEKL---------NVQVSDVKNVIIWGNH  188 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l---------~v~~~~v~~~~v~G~h  188 (332)
                      ...++.++....++...+++.+         +++..-++...|+|..
T Consensus       154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~  200 (357)
T 1rkx_A          154 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  200 (357)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCC
Confidence            2346667777777777777655         7777777766677853

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.41  E-value=5.1e-07  Score=77.92  Aligned_cols=104  Identities=17%  Similarity=0.184  Sum_probs=68.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |||.|+||+|++|++++..|+..|.       +|+++++++  +.+.    .+..... ....++.- .+. +++.++|+
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~--~~~~----~~~~~~~~~~~~D~~d-~~~-~~~~~~d~   65 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGH-------EVLAVVRDP--QKAA----DRLGATVATLVKEPLV-LTE-ADLDSVDA   65 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHH----HHTCTTSEEEECCGGG-CCH-HHHTTCSE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCC-------EEEEEEecc--cccc----cccCCCceEEeccccc-ccH-hhcccCCE
Confidence            5899999999999999999998763       799999874  2222    1111000 00000000 112 77899999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ||+++|....+..     ...|+...+.+++.+++..   .++|++|.
T Consensus        66 vi~~ag~~~~~~~-----~~~n~~~~~~l~~a~~~~~---~~~v~~SS  105 (224)
T 3h2s_A           66 VVDALSVPWGSGR-----GYLHLDFATHLVSLLRNSD---TLAVFILG  105 (224)
T ss_dssp             EEECCCCCTTSSC-----THHHHHHHHHHHHTCTTCC---CEEEEECC
T ss_pred             EEECCccCCCcch-----hhHHHHHHHHHHHHHHHcC---CcEEEEec
Confidence            9999998632222     2468888899999888764   45666653

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.41  E-value=1.3e-07  Score=88.42  Aligned_cols=138  Identities=17%  Similarity=0.195  Sum_probs=93.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||.|+||+|++|++++..|+..|.      .+++.+|++.+.       .                 +..++++++|+|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~------~~v~~~d~~~d~-------~-----------------~l~~~~~~~d~V   50 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTD------HHIFEVHRQTKE-------E-----------------ELESALLKADFI   50 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCC------CEEEECCTTCCH-------H-----------------HHHHHHHHCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC------CEEEEECCCCCH-------H-----------------HHHHHhccCCEE
Confidence            5899999999999999999998763      168888873110       0                 123445579999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHHHH
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRAL  165 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~  165 (332)
                      |++||.....  +..+.+..|+...+.+++.+++... ..++|.+|.-...            + ...++.++....++.
T Consensus        51 ih~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~v~~Ss~~~~------------~-~~~Y~~sK~~~E~~~  114 (369)
T 3st7_A           51 VHLAGVNRPE--HDKEFSLGNVSYLDHVLDILTRNTK-KPAILLSSSIQAT------------Q-DNPYGESKLQGEQLL  114 (369)
T ss_dssp             EECCCSBCTT--CSTTCSSSCCBHHHHHHHHHTTCSS-CCEEEEEEEGGGG------------S-CSHHHHHHHHHHHHH
T ss_pred             EECCcCCCCC--CHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCchhhc------------C-CCCchHHHHHHHHHH
Confidence            9999876422  2234456788889999999988763 2356666532110            0 123345566667777


Q ss_pred             HHHHHHcCCCCCCeeeeEEEeccC
Q 020022          166 GQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       166 ~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      ..+++..+++..-++...|+|...
T Consensus       115 ~~~~~~~g~~~~i~R~~~v~G~~~  138 (369)
T 3st7_A          115 REYAEEYGNTVYIYRWPNLFGKWC  138 (369)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTC
T ss_pred             HHHHHHhCCCEEEEECCceeCCCC
Confidence            777787888877788777788644

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=98.41  E-value=3.3e-07  Score=80.18  Aligned_cols=116  Identities=11%  Similarity=0.121  Sum_probs=74.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.++|.|+||+|++|++++..|+..|...     +|+++++++.  .+.....  .... ....++.-..+..++++++|
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~-----~V~~~~r~~~--~~~~~~~--~~~~-~~~~D~~d~~~~~~~~~~~d   86 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFS-----KVTLIGRRKL--TFDEEAY--KNVN-QEVVDFEKLDDYASAFQGHD   86 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCS-----EEEEEESSCC--CCCSGGG--GGCE-EEECCGGGGGGGGGGGSSCS
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCC-----EEEEEEcCCC--Ccccccc--CCce-EEecCcCCHHHHHHHhcCCC
Confidence            34789999999999999999999876432     6889998752  2221100  0000 00001111123556788999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +||++||.... ..+..+.+..|+.....+++.+.+.. . .++|++|.
T Consensus        87 ~vi~~ag~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~-~-~~iv~~SS  132 (242)
T 2bka_A           87 VGFCCLGTTRG-KAGAEGFVRVDRDYVLKSAELAKAGG-C-KHFNLLSS  132 (242)
T ss_dssp             EEEECCCCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTT-C-CEEEEECC
T ss_pred             EEEECCCcccc-cCCcccceeeeHHHHHHHHHHHHHCC-C-CEEEEEcc
Confidence            99999986521 11234667788888899999888765 2 35667664

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=98.40  E-value=1.4e-06  Score=84.26  Aligned_cols=111  Identities=16%  Similarity=0.155  Sum_probs=71.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh--------hhhc-C---CccceEee
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV--------DAAF-P---LLKGVVAT   72 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~--------~~~~-~---~~~~~~~~   72 (332)
                      .+||+||| +|.||+.++..|+..|.       +|+++|+++  +.++.....+.        .... .   ......++
T Consensus        37 ~~kV~VIG-aG~MG~~iA~~la~~G~-------~V~l~D~~~--~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~  106 (463)
T 1zcj_A           37 VSSVGVLG-LGTMGRGIAISFARVGI-------SVVAVESDP--KQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFS  106 (463)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTC-------EEEEECSSH--HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEE
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEECCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhc
Confidence            46999999 69999999999998764       799999984  33332111111        1100 0   01123445


Q ss_pred             CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           73 TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        73 ~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                      ++. +++++||+||++..              .+..+.+++...+..+++|++++  +||.+.+-...+.
T Consensus       107 ~~~-~~~~~aDlVIeaVp--------------e~~~~k~~v~~~l~~~~~~~~ii--~snTs~~~~~~la  159 (463)
T 1zcj_A          107 SST-KELSTVDLVVEAVF--------------EDMNLKKKVFAELSALCKPGAFL--CTNTSALNVDDIA  159 (463)
T ss_dssp             SCG-GGGTTCSEEEECCC--------------SCHHHHHHHHHHHHHHSCTTCEE--EECCSSSCHHHHH
T ss_pred             CCH-HHHCCCCEEEEcCC--------------CCHHHHHHHHHHHHhhCCCCeEE--EeCCCCcCHHHHH
Confidence            555 78999999999952              24566777888888888777643  4566654333333

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=98.39  E-value=2.8e-07  Score=85.58  Aligned_cols=169  Identities=16%  Similarity=0.154  Sum_probs=99.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~a   82 (332)
                      .++|.|+||+|++|++++..|+.. |..      +|+++++++  ..+......+..... .....+.-.....++++++
T Consensus        21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~------~V~~~~r~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~   92 (344)
T 2gn4_A           21 NQTILITGGTGSFGKCFVRKVLDTTNAK------KIIVYSRDE--LKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGV   92 (344)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCCCS------EEEEEESCH--HHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhhCCCC------EEEEEECCh--hhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcC
Confidence            479999999999999999999987 531      689999874  333222222211000 0000111111245678899


Q ss_pred             cEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHH
Q 020022           83 NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLD  160 (332)
Q Consensus        83 DiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~ld  160 (332)
                      |+||++||....+  ..+..+.+..|+.....+++.+.+...  .++|++|.-..            +.+...++.++..
T Consensus        93 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v--~~~V~~SS~~~------------~~p~~~Y~~sK~~  158 (344)
T 2gn4_A           93 DICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAI--SQVIALSTDKA------------ANPINLYGATKLC  158 (344)
T ss_dssp             SEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTC--SEEEEECCGGG------------SSCCSHHHHHHHH
T ss_pred             CEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCC--CEEEEecCCcc------------CCCccHHHHHHHH
Confidence            9999999876421  123456788999999999999988753  35666664110            1122334555555


Q ss_pred             HHHHHHHHHHHc---CCCCCCeeeeEEEeccCCceeecC
Q 020022          161 HNRALGQISEKL---NVQVSDVKNVIIWGNHSSSQYPDV  196 (332)
Q Consensus       161 s~r~~~~la~~l---~v~~~~v~~~~v~G~hg~~~v~~~  196 (332)
                      ..++...+++.+   |+...-++...|+|..+ +.+|.|
T Consensus       159 ~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~-~~i~~~  196 (344)
T 2gn4_A          159 SDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG-SVVPFF  196 (344)
T ss_dssp             HHHHHHHGGGCCCSSCCEEEEECCCEETTCTT-SHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcEEEEEEeccEECCCC-CHHHHH
Confidence            555555555432   34444455555556433 344544

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=98.39  E-value=7.5e-07  Score=83.92  Aligned_cols=175  Identities=12%  Similarity=0.126  Sum_probs=99.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhh--------------hhhhHHHHhhhhcCCccceE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA--------------LNGVKMELVDAAFPLLKGVV   70 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~--------------l~~~~~dl~~~~~~~~~~~~   70 (332)
                      .++|.||||+|++|++++..|+..|.       +|+++|+......              +.....++.........-+.
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~   83 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKNY-------EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYV   83 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEE
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCCC-------eEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEE
Confidence            57999999999999999999998763       7899987531100              00000111111101000011


Q ss_pred             ee----CChhhhcCC--CcEEEEeCCCCCCC--CCCHH---HHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           71 AT----TDAVEACTG--VNIAVMVGGFPRKE--GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        71 ~~----~~~~~al~~--aDiVi~~ag~~~~~--~~~r~---~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                      ..    ....+++++  +|+||++||.....  ..+..   ..+..|+.....+++.+.+... ..++|++|.. .+...
T Consensus        84 ~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~~~~V~~SS~-~vyg~  161 (404)
T 1i24_A           84 GDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGTM-GEYGT  161 (404)
T ss_dssp             SCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECCG-GGGCC
T ss_pred             CCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCC-CcEEEEeCcH-HHhCC
Confidence            11    113345666  99999999865311  11222   3667899999999999988753 2367777642 11000


Q ss_pred             HHHHhC----------------CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          140 ILKEFA----------------PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       140 ~~~~~~----------------~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      .-..+.                ...++...++.+.....++...+++..|++..-++...|+|..
T Consensus       162 ~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~  226 (404)
T 1i24_A          162 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVK  226 (404)
T ss_dssp             CSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSC
T ss_pred             CCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCC
Confidence            000000                0011122456666766677667777778888888877778864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.39  E-value=6.1e-07  Score=81.15  Aligned_cols=161  Identities=16%  Similarity=0.127  Sum_probs=98.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC-
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG-   81 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~-   81 (332)
                      +++|||.|+||+|++|++++..|+..|...   ..+...+         .....|+.+..           ...+++++ 
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~---~~~~~~~---------~~~~~D~~d~~-----------~~~~~~~~~   60 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAGLP---GEDWVFV---------SSKDADLTDTA-----------QTRALFEKV   60 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTCCT---TCEEEEC---------CTTTCCTTSHH-----------HHHHHHHHS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCCcc---ccccccc---------CceecccCCHH-----------HHHHHHhhc
Confidence            467899999999999999999999876311   0111111         11123333221           23444554 


Q ss_pred             -CcEEEEeCCCCCC---CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhC--C-CCCC
Q 020022           82 -VNIAVMVGGFPRK---EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFA--P-SIPA  150 (332)
Q Consensus        82 -aDiVi~~ag~~~~---~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~--~-~~~~  150 (332)
                       +|+||++|+....   ...+..+.+..|+...+.+++.+.+...  .++|++|... +...    .+.+..  . ...+
T Consensus        61 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~--~~~v~~SS~~-vyg~~~~~~~~E~~~~~~~~~p  137 (319)
T 4b8w_A           61 QPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGA--RKVVSCLSTC-IFPDKTTYPIDETMIHNGPPHN  137 (319)
T ss_dssp             CCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTC--SEEEEECCGG-GSCSSCCSSBCGGGGGBSCCCS
T ss_pred             CCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCC--CeEEEEcchh-hcCCCCCCCccccccccCCCCC
Confidence             9999999987531   1235567789999999999999988763  2566665421 1000    000000  0 0111


Q ss_pred             Cc-EEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          151 KN-ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       151 ~~-i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      .. .++.++....++...+++..+++..-++...|+|...
T Consensus       138 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~  177 (319)
T 4b8w_A          138 SNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHD  177 (319)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTC
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCC
Confidence            12 2566777777777777888888877888777788643

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=98.38  E-value=1.7e-06  Score=82.53  Aligned_cols=123  Identities=17%  Similarity=0.183  Sum_probs=73.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH--------HHhhhhcCCccceEeeCChh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM--------ELVDAAFPLLKGVVATTDAV   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~--------dl~~~~~~~~~~~~~~~~~~   76 (332)
                      .|||+||| +|.||..+|..|+. |.       +|.++|+++  ++++....        ++.+.......+++.+++..
T Consensus        36 ~mkIaVIG-lG~mG~~lA~~La~-G~-------~V~~~D~~~--~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~  104 (432)
T 3pid_A           36 FMKITISG-TGYVGLSNGVLIAQ-NH-------EVVALDIVQ--AKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKH  104 (432)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHT-TS-------EEEEECSCH--HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHc-CC-------eEEEEecCH--HHhhHHhccCCccccccHHHHHhhccCCeEEEcCHH
Confidence            47999999 79999999998886 53       899999984  44332211        11110000023577888888


Q ss_pred             hhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccchHHHHHHh
Q 020022           77 EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTNALILKEF  144 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~~~~~~~~~  144 (332)
                      +++++||+||++...+......     .-++..+++.++.|.+. .|+.+||.. |.|....-.+...+
T Consensus       105 ea~~~aDvViiaVPt~~~~~~~-----~~Dl~~V~~v~~~i~~l-~~g~iVV~~STv~pgtt~~l~~~l  167 (432)
T 3pid_A          105 DAYRNADYVIIATPTDYDPKTN-----YFNTSTVEAVIRDVTEI-NPNAVMIIKSTIPVGFTRDIKERL  167 (432)
T ss_dssp             HHHTTCSEEEECCCCEEETTTT-----EEECHHHHHHHHHHHHH-CTTSEEEECSCCCTTHHHHHHHHH
T ss_pred             HHHhCCCEEEEeCCCccccccc-----cccHHHHHHHHHHHHhc-CCCcEEEEeCCCChHHHHHHHHHH
Confidence            9999999999986544211110     11233444445555553 356655554 45766554554443

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=98.38  E-value=1.8e-06  Score=87.94  Aligned_cols=105  Identities=13%  Similarity=0.224  Sum_probs=72.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh----h----c------CCccceE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA----A----F------PLLKGVV   70 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~----~----~------~~~~~~~   70 (332)
                      ++||+||| +|.||+.+|..++..|.       +|+++|+++  +.++.....+.+.    .    .      ....+++
T Consensus       312 ~~kV~VIG-aG~MG~~iA~~la~aG~-------~V~l~D~~~--~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~  381 (725)
T 2wtb_A          312 IKKVAIIG-GGLMGSGIATALILSNY-------PVILKEVNE--KFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLK  381 (725)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHTTTC-------CEEEECSSH--HHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEE
T ss_pred             CcEEEEEc-CCHhhHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceE
Confidence            46899999 69999999999998774       799999985  3333211111110    0    0      0124567


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      .+++. +++++||+||.+.              ..+..+.+++...+.++++|++  |++||...+
T Consensus       382 ~~~d~-~~~~~aDlVIeaV--------------pe~~~vk~~v~~~l~~~~~~~~--IlasntStl  430 (725)
T 2wtb_A          382 GSLDY-ESFRDVDMVIEAV--------------IENISLKQQIFADLEKYCPQHC--ILASNTSTI  430 (725)
T ss_dssp             EESSS-GGGTTCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC--EEEECCSSS
T ss_pred             EeCCH-HHHCCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc--EEEeCCCCC
Confidence            77666 7899999999985              2356667788888999987776  346776544

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.37  E-value=3.8e-07  Score=83.91  Aligned_cols=164  Identities=15%  Similarity=0.131  Sum_probs=98.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe--eC---Chhhhc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA--TT---DAVEAC   79 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~--~~---~~~~al   79 (332)
                      |||.|+||+|++|++++..|+.. |.       +|++++++.  +.+..    +...  ....-+..  ..   ...+++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~--~~~~~----~~~~--~~~~~~~~D~~~~~~~~~~~~   65 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHY-------EVYGLDIGS--DAISR----FLNH--PHFHFVEGDISIHSEWIEYHV   65 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC-------EEEEEESCC--GGGGG----GTTC--TTEEEEECCTTTCSHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCC-------EEEEEeCCc--chHHH----hhcC--CCeEEEeccccCcHHHHHhhc
Confidence            48999999999999999999986 42       789999874  22211    1000  00000011  11   134567


Q ss_pred             CCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCC---CC-
Q 020022           80 TGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPS---IP-  149 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~---~~-  149 (332)
                      +++|+||++||.....  ..+..+.+..|+.....+++.+.+..   .++|++|... +...    .+.+..+.   .| 
T Consensus        66 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~v~~SS~~-v~g~~~~~~~~e~~~~~~~~~~  141 (345)
T 2bll_A           66 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSE-VYGMCSDKYFDEDHSNLIVGPV  141 (345)
T ss_dssp             HHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGG-GGBTCCCSSBCTTTCCCBCCCT
T ss_pred             cCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC---CeEEEEecHH-HcCCCCCCCcCCcccccccCcc
Confidence            7899999999865311  12345667788888889998888754   3566666421 1000    00000000   01 


Q ss_pred             --CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          150 --AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       150 --~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                        +...++.++....++...+++..+++..-++...|+|..
T Consensus       142 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~  182 (345)
T 2bll_A          142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPR  182 (345)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSS
T ss_pred             cCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCC
Confidence              111456677777777777777778887777766677864

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.37  E-value=1.2e-06  Score=85.83  Aligned_cols=105  Identities=17%  Similarity=0.193  Sum_probs=71.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      +|||+|+||+|++|++++..|+..|.       +|+.++++..  .......|+.             ....++++++|+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~-------~V~~l~R~~~--~~~~v~~d~~-------------~~~~~~l~~~D~  204 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGH-------EVIQLVRKEP--KPGKRFWDPL-------------NPASDLLDGADV  204 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESSSC--CTTCEECCTT-------------SCCTTTTTTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCCC--Cccceeeccc-------------chhHHhcCCCCE
Confidence            68999999999999999999998763       7899998752  2221112221             124567889999


Q ss_pred             EEEeCCCCCCC---CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKE---GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~---~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ||++|+.....   .....+++..|+...+.+++.+.+.... .++|++|.
T Consensus       205 Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~-~r~V~~SS  254 (516)
T 3oh8_A          205 LVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQC-TTMISASA  254 (516)
T ss_dssp             EEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSC-CEEEEEEE
T ss_pred             EEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCc
Confidence            99999875321   2234567788999999999985544322 35666653

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=98.36  E-value=1.2e-06  Score=85.00  Aligned_cols=111  Identities=15%  Similarity=0.117  Sum_probs=74.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC----------ccceEeeCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL----------LKGVVATTD   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~----------~~~~~~~~~   74 (332)
                      .|||+||| +|.||..++..|+..|.       ++.++|+++  ++++...........+.          ..+++.+++
T Consensus         8 ~~~I~VIG-~G~vG~~lA~~la~~G~-------~V~~~d~~~--~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd   77 (478)
T 2y0c_A            8 SMNLTIIG-SGSVGLVTGACLADIGH-------DVFCLDVDQ--AKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTD   77 (478)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECC
T ss_pred             CceEEEEC-cCHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECC
Confidence            58999999 79999999999998763       799999984  33332211000000000          125778888


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           75 AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      ..+++++||+||++...|.+.+.      .-++..+++.++.|.++..++.+|+..|
T Consensus        78 ~~~a~~~aDvviiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~~~iVV~~S  128 (478)
T 2y0c_A           78 IEAAVAHGDVQFIAVGTPPDEDG------SADLQYVLAAARNIGRYMTGFKVIVDKS  128 (478)
T ss_dssp             HHHHHHHCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred             HHHHhhcCCEEEEEeCCCcccCC------CccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence            88889999999999887654322      1345566677777777776666555544

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.36  E-value=3.5e-07  Score=85.56  Aligned_cols=173  Identities=10%  Similarity=-0.067  Sum_probs=95.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEe-eC------Chhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVA-TT------DAVE   77 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~-~~------~~~~   77 (332)
                      ++|.|+||+|++|++++..|+..|.       +|+++|+++...... ...++...... ...++.. ..      ...+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~   96 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGY-------EVHGIVRRSSSFNTG-RIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVK   96 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCSSCCCT-TTGGGC---------CEEEEECCTTCHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCccccchh-hHHHHhhhhccccCCCceEEEccCCCHHHHHH
Confidence            6899999999999999999998763       788998874210000 00111000000 0001111 11      1234


Q ss_pred             hcCC--CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCC-CeEEEEecCcccchHH---HHHHhCCCCC
Q 020022           78 ACTG--VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAP-NCKVLVVANPANTNAL---ILKEFAPSIP  149 (332)
Q Consensus        78 al~~--aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~-~~~viv~tNP~~~~~~---~~~~~~~~~~  149 (332)
                      ++++  .|+||++||.....  ..+....+..|+.....+++.+.+...+ ..++|++|...-.-..   .+.+. ....
T Consensus        97 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-~~~~  175 (375)
T 1t2a_A           97 IINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-TPFY  175 (375)
T ss_dssp             HHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-SCCC
T ss_pred             HHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCcc-CCCC
Confidence            4554  59999999865311  1234556788999999999998876521 1466666642110000   00000 0111


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      +...++.+.....++...+++..+++..-++.+.++|.
T Consensus       176 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp  213 (375)
T 1t2a_A          176 PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESP  213 (375)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECT
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCC
Confidence            22346667777777777778877876554554444454

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.31  E-value=1.5e-06  Score=75.01  Aligned_cols=101  Identities=14%  Similarity=0.089  Sum_probs=63.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHH-hcccCCCCCceEEEEEeCCCchh-hhhhhHHHHhhhhc-CCccceEeeCChhhhcCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIA-RGVMLGTDQPVILHMLDIPPAAE-ALNGVKMELVDAAF-PLLKGVVATTDAVEACTG   81 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~-~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~   81 (332)
                      +++|.|+||+|++|++++..|+ ..|.       +|+++++++  + +++....  ..... ....++.-..+..+++++
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~-------~V~~~~r~~--~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~   73 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDM-------HITLYGRQL--KTRIPPEII--DHERVTVIEGSFQNPGXLEQAVTN   73 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCC-------EEEEEESSH--HHHSCHHHH--TSTTEEEEECCTTCHHHHHHHHTT
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCc-------eEEEEecCc--cccchhhcc--CCCceEEEECCCCCHHHHHHHHcC
Confidence            3459999999999999999999 6653       799999874  3 3322110  00000 000011111234567899


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +|+||+++|..             |+. .+.+++.+++...  .++|++|.
T Consensus        74 ~d~vv~~ag~~-------------n~~-~~~~~~~~~~~~~--~~iv~iSs  108 (221)
T 3r6d_A           74 AEVVFVGAMES-------------GSD-MASIVKALSRXNI--RRVIGVSM  108 (221)
T ss_dssp             CSEEEESCCCC-------------HHH-HHHHHHHHHHTTC--CEEEEEEE
T ss_pred             CCEEEEcCCCC-------------Chh-HHHHHHHHHhcCC--CeEEEEee
Confidence            99999999854             444 7888888887653  35666653

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.31  E-value=1.6e-06  Score=80.77  Aligned_cols=172  Identities=9%  Similarity=-0.029  Sum_probs=93.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-------eCChhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-------TTDAVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-------~~~~~~a   78 (332)
                      ++|.|+||+|++|++++..|+..|.       +|+++|++....... ...++.........++..       .....++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   73 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGY-------EVHGIKRRASSFNTE-RVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRI   73 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECC----------------------CCEEECCCCSSCHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEECCCcccchH-HHHHHhhccccCCCceEEEECCCCCHHHHHHH
Confidence            5899999999999999999998763       789998864210000 001111000000011111       1123344


Q ss_pred             cCC--CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCC-CeEEEEecCcccchHH----HHHHhCCCCC
Q 020022           79 CTG--VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAP-NCKVLVVANPANTNAL----ILKEFAPSIP  149 (332)
Q Consensus        79 l~~--aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~-~~~viv~tNP~~~~~~----~~~~~~~~~~  149 (332)
                      +++  .|+||++||.....  ..+....+..|+.....+++.+.+...+ ..++|++|... +...    .+.+. ...+
T Consensus        74 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~-v~g~~~~~~~~E~-~~~~  151 (372)
T 1db3_A           74 LREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE-LYGLVQEIPQKET-TPFY  151 (372)
T ss_dssp             HHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GGTTCCSSSBCTT-SCCC
T ss_pred             HHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChh-hhCCCCCCCCCcc-CCCC
Confidence            554  69999999975322  1345566788999999999998876521 14566666421 1000    00000 0112


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      +...++.++....++...+++.++++..-++.+.++|.
T Consensus       152 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp  189 (372)
T 1db3_A          152 PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESP  189 (372)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECT
T ss_pred             CCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCC
Confidence            22346667777777777788888876544443333443

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.30  E-value=3.1e-06  Score=74.32  Aligned_cols=106  Identities=17%  Similarity=0.121  Sum_probs=70.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhhcCCccceEeeCChhhhc----C
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFPLLKGVVATTDAVEAC----T   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~~~~~~~~~~~~~~~~al----~   80 (332)
                      ++|.|+||+|++|++++..|+..|.       +|+++|+++.  .+. ....|+.+..           ...+++    .
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~D~~~~~-----------~~~~~~~~~~~   61 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH-------TVIGIDRGQA--DIEADLSTPGGRET-----------AVAAVLDRCGG   61 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSSS--SEECCTTSHHHHHH-----------HHHHHHHHHTT
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC-------EEEEEeCChh--HccccccCCcccHH-----------HHHHHHHHcCC
Confidence            4799999999999999999998763       7999998752  221 1234444332           122223    4


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecC
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA--APNCKVLVVAN  132 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tN  132 (332)
                      +.|+||++||.... ..+....+..|+.....+.+.+.+..  .+..++|++|.
T Consensus        62 ~~d~vi~~Ag~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS  114 (255)
T 2dkn_A           62 VLDGLVCCAGVGVT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGS  114 (255)
T ss_dssp             CCSEEEECCCCCTT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred             CccEEEECCCCCCc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEec
Confidence            89999999997642 23456777888877777777665541  12256777764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=98.30  E-value=1.5e-06  Score=79.81  Aligned_cols=116  Identities=16%  Similarity=0.077  Sum_probs=71.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--C
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--G   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~   81 (332)
                      +.|+|.|+||+|++|++++..|+..|.       +|+++|++.. . ......++.... ....++.-.....++++  +
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~-------~V~~~~r~~~-~-~~~~~~~l~~v~-~~~~Dl~d~~~~~~~~~~~~   88 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGH-------EILVIDNFAT-G-KREVLPPVAGLS-VIEGSVTDAGLLERAFDSFK   88 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTC-------EEEEEECCSS-S-CGGGSCSCTTEE-EEECCTTCHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCCc-c-chhhhhccCCce-EEEeeCCCHHHHHHHHhhcC
Confidence            347999999999999999999998763       7899998642 1 110000110000 00000000112345666  8


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +|+||++||..........+ +..|+.....+++.+.+.. . .++|++|.
T Consensus        89 ~D~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~-~-~~iV~~SS  136 (330)
T 2pzm_A           89 PTHVVHSAAAYKDPDDWAED-AATNVQGSINVAKAASKAG-V-KRLLNFQT  136 (330)
T ss_dssp             CSEEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHT-C-SEEEEEEE
T ss_pred             CCEEEECCccCCCccccChh-HHHHHHHHHHHHHHHHHcC-C-CEEEEecC
Confidence            99999999976432111223 7789999999999988765 2 35666664

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=98.29  E-value=1.1e-06  Score=80.07  Aligned_cols=105  Identities=17%  Similarity=0.135  Sum_probs=57.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC--C
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG--V   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~--a   82 (332)
                      .+||.|+||+|++|++++..|+..|.       +|+++|++....  .-...|+.+           .....+++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~--~~~~~Dl~d-----------~~~~~~~~~~~~~   61 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNW-------HAVGCGFRRARP--KFEQVNLLD-----------SNAVHHIIHDFQP   61 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEC-------------------------------CHHHHHHHCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC-------eEEEEccCCCCC--CeEEecCCC-----------HHHHHHHHHhhCC
Confidence            36899999999999999999998763       789998764210  011123322           1234555654  8


Q ss_pred             cEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           83 NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        83 DiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |+||++||.....  ..+..+.+..|+.....+++.+.+..   +++|++|.
T Consensus        62 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~---~~~v~~SS  110 (315)
T 2ydy_A           62 HVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG---AFLIYISS  110 (315)
T ss_dssp             SEEEECC-------------------CHHHHHHHHHHHHHT---CEEEEEEE
T ss_pred             CEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEch
Confidence            9999999875321  22345667889999999999988864   35666664

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.29  E-value=8.2e-07  Score=78.62  Aligned_cols=156  Identities=12%  Similarity=0.027  Sum_probs=90.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|.|+||+|.+|.+++..|+..|.       +|++.|+++..........|+.+....  ..  ......+.+...|+
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-------~V~~~~r~~~~~~~~~~~~d~~d~~~v--~~--~~~~~~~~~g~iD~   90 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-------NTISIDFRENPNADHSFTIKDSGEEEI--KS--VIEKINSKSIKVDT   90 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCCTTSSEEEECSCSSHHHH--HH--HHHHHHTTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCcccccccceEEEeCCHHHH--HH--HHHHHHHHcCCCCE
Confidence            46899999999999999999998874       799999985321111111221111000  00  00012223346799


Q ss_pred             EEEeCCCCCCC----CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEec
Q 020022           85 AVMVGGFPRKE----GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLT  157 (332)
Q Consensus        85 Vi~~ag~~~~~----~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t  157 (332)
                      +|+.||.....    ..+   ....+..|+.....+.+.+..+..+.++||++|.....         .+.+....++.+
T Consensus        91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~---------~~~~~~~~Y~~s  161 (251)
T 3orf_A           91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL---------NRTSGMIAYGAT  161 (251)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG---------SCCTTBHHHHHH
T ss_pred             EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhc---------cCCCCCchhHHH
Confidence            99999975321    122   23456678877777777766654334577777754331         122322345555


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCee
Q 020022          158 RLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.....+-+.+++.++..+..|+
T Consensus       162 Kaa~~~~~~~la~e~~~~~~gi~  184 (251)
T 3orf_A          162 KAATHHIIKDLASENGGLPAGST  184 (251)
T ss_dssp             HHHHHHHHHHHTSTTSSSCTTCE
T ss_pred             HHHHHHHHHHHHHHhcccCCCcE
Confidence            55555666777776654456676

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=98.28  E-value=1.4e-06  Score=79.12  Aligned_cols=167  Identities=13%  Similarity=0.031  Sum_probs=98.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--CCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~aD   83 (332)
                      |||.|+||+|++|++++..|+..|.       +|+++|+... ....    .+.........++.-.....++++  ++|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~-------~V~~~~r~~~-~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d   68 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGL-------EVAVLDNLAT-GKRE----NVPKGVPFFRVDLRDKEGVERAFREFRPT   68 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-------EEEEECCCSS-CCGG----GSCTTCCEECCCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC-------EEEEEECCCc-Cchh----hcccCeEEEECCCCCHHHHHHHHHhcCCC
Confidence            4899999999999999999998763       7888887431 1111    010000000001100112345566  799


Q ss_pred             EEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH-HHhCC-----CCCCCcEEE
Q 020022           84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL-KEFAP-----SIPAKNITC  155 (332)
Q Consensus        84 iVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~-~~~~~-----~~~~~~i~~  155 (332)
                      +||++|+.....  ..+....+..|+.....+++.+.+...  .++|++|....+  +-. ....+     ..++...++
T Consensus        69 ~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~--~~iv~~SS~~~~--~g~~~~~~~~~E~~~~~~~~~Y~  144 (311)
T 2p5y_A           69 HVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGV--EKLVFASTGGAI--YGEVPEGERAEETWPPRPKSPYA  144 (311)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC--SEEEEEEEHHHH--HCCCCTTCCBCTTSCCCCCSHHH
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeCCChhh--cCCCCCCCCcCCCCCCCCCChHH
Confidence            999999865311  123456678899999999998887652  356666542110  000 00000     011223466


Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      .++....++...+++..+++..-++...|+|..
T Consensus       145 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~  177 (311)
T 2p5y_A          145 ASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPR  177 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECEEECTT
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeeccccCcC
Confidence            777777777777777788887788877777853

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=98.28  E-value=1.7e-06  Score=75.70  Aligned_cols=106  Identities=15%  Similarity=0.146  Sum_probs=63.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      ++++++|.|+||+|++|++++..|+..|-      .+|+++++++  +.+.....   ........++.-..+..+++++
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~------~~V~~~~R~~--~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~   88 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQT------IKQTLFARQP--AKIHKPYP---TNSQIIMGDVLNHAALKQAMQG   88 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTT------EEEEEEESSG--GGSCSSCC---TTEEEEECCTTCHHHHHHHHTT
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCC------ceEEEEEcCh--hhhccccc---CCcEEEEecCCCHHHHHHHhcC
Confidence            34567999999999999999999998761      1789999875  22221000   0000000011111234577899


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +|+||+++|...     . +      ...+.+++.+++...  .+||++|.
T Consensus        89 ~D~vv~~a~~~~-----~-~------~~~~~~~~~~~~~~~--~~iV~iSS  125 (236)
T 3qvo_A           89 QDIVYANLTGED-----L-D------IQANSVIAAMKACDV--KRLIFVLS  125 (236)
T ss_dssp             CSEEEEECCSTT-----H-H------HHHHHHHHHHHHTTC--CEEEEECC
T ss_pred             CCEEEEcCCCCc-----h-h------HHHHHHHHHHHHcCC--CEEEEEec
Confidence            999999987531     1 1      124567777777652  35777764

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=98.28  E-value=1.6e-06  Score=80.02  Aligned_cols=172  Identities=13%  Similarity=0.049  Sum_probs=97.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch----hhhhhhHHHHhhhhcCCccceEee----CChh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA----EALNGVKMELVDAAFPLLKGVVAT----TDAV   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~----~~l~~~~~dl~~~~~~~~~~~~~~----~~~~   76 (332)
                      .+||.|+||+|++|++++..|+..|.       +|+++|+....    .........+.........-+...    ....
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   74 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGY-------LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQ   74 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC-------CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHH
Confidence            36899999999999999999998763       68888875311    001111112221100000001111    1233


Q ss_pred             hhcC--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCC
Q 020022           77 EACT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSI  148 (332)
Q Consensus        77 ~al~--~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~  148 (332)
                      ++++  ++|+||++||.....  ..+..+.+..|+.....+++.+.+.. . .++|++|.. .+...    .+.+- ...
T Consensus        75 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~iv~~SS~-~~~g~~~~~~~~E~-~~~  150 (348)
T 1ek6_A           75 RLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-V-KNLVFSSSA-TVYGNPQYLPLDEA-HPT  150 (348)
T ss_dssp             HHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-C-CEEEEEEEG-GGGCSCSSSSBCTT-SCC
T ss_pred             HHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-C-CEEEEECcH-HHhCCCCCCCcCCC-CCC
Confidence            4555  899999999865311  12345677889999999999888764 2 356666542 11000    00000 001


Q ss_pred             CC-CcEEEechHHHHHHHHHHHHHcC--CCCCCeeeeEEEecc
Q 020022          149 PA-KNITCLTRLDHNRALGQISEKLN--VQVSDVKNVIIWGNH  188 (332)
Q Consensus       149 ~~-~~i~~~t~lds~r~~~~la~~l~--v~~~~v~~~~v~G~h  188 (332)
                      .+ ...++.++....++...+++. +  ++..-++...|+|.+
T Consensus       151 ~p~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~  192 (348)
T 1ek6_A          151 GGCTNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAH  192 (348)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCC
Confidence            12 234566777777777777766 5  666666766667764

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=98.28  E-value=2.6e-06  Score=80.91  Aligned_cols=122  Identities=11%  Similarity=0.175  Sum_probs=74.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH--------HhhhhcCCccceEeeCChhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME--------LVDAAFPLLKGVVATTDAVE   77 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d--------l~~~~~~~~~~~~~~~~~~~   77 (332)
                      |||+||| +|.||..++..|+. |.       ++.++|+++  ++++.....        +.+.......++..+++..+
T Consensus         1 MkI~VIG-~G~vG~~~A~~La~-G~-------~V~~~d~~~--~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~   69 (402)
T 1dlj_A            1 MKIAVAG-SGYVGLSLGVLLSL-QN-------EVTIVDILP--SKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKA   69 (402)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTT-TS-------EEEEECSCH--HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHhC-CC-------EEEEEECCH--HHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHH
Confidence            4899999 69999999999987 52       799999984  333321110        00000000124566777778


Q ss_pred             hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEE-ecCcccchHHHHHHh
Q 020022           78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLV-VANPANTNALILKEF  144 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv-~tNP~~~~~~~~~~~  144 (332)
                      ++++||+||++...+...+..+.     .+..+++.++.+.+. .++.+|+. .|||.+....+...+
T Consensus        70 ~~~~aDvviiavpt~~~~~~~~~-----dl~~v~~v~~~i~~l-~~~~iVV~~ST~~~g~~~~l~~~~  131 (402)
T 1dlj_A           70 AYKEAELVIIATPTNYNSRINYF-----DTQHVETVIKEVLSV-NSHATLIIKSTIPIGFITEMRQKF  131 (402)
T ss_dssp             HHHHCSEEEECCCCCEETTTTEE-----CCHHHHHHHHHHHHH-CSSCEEEECSCCCTTHHHHHHHHT
T ss_pred             HhcCCCEEEEecCCCcccCCCCc-----cHHHHHHHHHHHHhh-CCCCEEEEeCCCCccHHHHHHHHh
Confidence            89999999999766532111111     123344555555553 35565555 689998766655543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.27  E-value=2.2e-06  Score=75.46  Aligned_cols=149  Identities=19%  Similarity=0.184  Sum_probs=81.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cCCccceEeeCChhhh----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPLLKGVVATTDAVEA----   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~~~~~~~~~~~~~~a----   78 (332)
                      ..++|.|+||+|++|++++..|+..|.       +|+++|+++  +.++....++.... .....++.-..+..++    
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-------RLILIDREA--AALDRAAQELGAAVAARIVADVTDAEAMTAAAAEA   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHH
Confidence            346899999999999999999998763       799999874  33332222221100 0000000000011122    


Q ss_pred             --cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           79 --CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        79 --l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                        +.+.|+||+.||.....   ..+   ....+..|+..    .+.+.+.+.+..  ..+||++|.....         .
T Consensus        81 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~---------~  149 (254)
T 2wsb_A           81 EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG--AGAIVNLGSMSGT---------I  149 (254)
T ss_dssp             HHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT---------S
T ss_pred             HhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEecchhc---------c
Confidence              35789999999975421   122   23455667655    555555555543  3577777754321         1


Q ss_pred             CCCCC--cEEEechHHHHHHHHHHHHHc
Q 020022          147 SIPAK--NITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       147 ~~~~~--~i~~~t~lds~r~~~~la~~l  172 (332)
                      +.|..  ..++.++.....+.+.+++.+
T Consensus       150 ~~~~~~~~~Y~~sK~a~~~~~~~~~~~~  177 (254)
T 2wsb_A          150 VNRPQFASSYMASKGAVHQLTRALAAEW  177 (254)
T ss_dssp             CCSSSCBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            11222  234445555556666666665

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=98.27  E-value=4.6e-06  Score=80.76  Aligned_cols=123  Identities=16%  Similarity=0.133  Sum_probs=74.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH--------HHhhhhc-CCccceEeeCCh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM--------ELVDAAF-PLLKGVVATTDA   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~--------dl~~~~~-~~~~~~~~~~~~   75 (332)
                      +|||+||| +|.||..++..|+..+. +    .+++++|+++  ++++....        ++.+... ....+++.+++.
T Consensus         5 ~mkI~VIG-~G~mG~~lA~~La~~g~-G----~~V~~~d~~~--~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~   76 (467)
T 2q3e_A            5 IKKICCIG-AGYVGGPTCSVIAHMCP-E----IRVTVVDVNE--SRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNI   76 (467)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHCT-T----SEEEEECSCH--HHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCH
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcCC-C----CEEEEEECCH--HHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCH
Confidence            47999999 79999999999998731 1    1799999984  33332110        0000000 001256677788


Q ss_pred             hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccc
Q 020022           76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANT  136 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~  136 (332)
                      .+++++||+||++...+........+ ...++..+.+.++.+.++..++.+|+.. |+|...
T Consensus        77 ~e~~~~aDvViiaVptp~~~~~v~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~  137 (467)
T 2q3e_A           77 DDAIKEADLVFISVNTPTKTYGMGKG-RAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRA  137 (467)
T ss_dssp             HHHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTH
T ss_pred             HHHHhcCCEEEEEcCCchhhcccccc-CCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchH
Confidence            88899999999998766432110000 0123455666777777765566655554 567654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=98.26  E-value=9.7e-07  Score=79.22  Aligned_cols=97  Identities=18%  Similarity=0.231  Sum_probs=70.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--CCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~aD   83 (332)
                      |||.|+||+|++|++++..|+..|.       +|+.+++.+         .|+.+..           ...++++  ++|
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~---------~D~~d~~-----------~~~~~~~~~~~d   58 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEY-------DIYPFDKKL---------LDITNIS-----------QVQQVVQEIRPH   58 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTE-------EEEEECTTT---------SCTTCHH-----------HHHHHHHHHCCS
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCC-------EEEEecccc---------cCCCCHH-----------HHHHHHHhcCCC
Confidence            5899999999999999999987653       788888742         2333221           2334444  799


Q ss_pred             EEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        84 iVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +||++|+.....  ..+..+.+..|+.....+++.+.+..   +++|++|.
T Consensus        59 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~v~~SS  106 (287)
T 3sc6_A           59 IIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG---AKLVYIST  106 (287)
T ss_dssp             EEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT---CEEEEEEE
T ss_pred             EEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEch
Confidence            999999876421  14566788899999999999998875   25666653

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=98.25  E-value=4e-06  Score=76.10  Aligned_cols=96  Identities=20%  Similarity=0.290  Sum_probs=64.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+||| +|.||+.+|..|+ .|.       +|+++|+++  +.++.....+.+   ....+++.+++..+ +++||+|
T Consensus        13 ~~V~vIG-~G~MG~~iA~~la-aG~-------~V~v~d~~~--~~~~~~~~~l~~---~~~~~i~~~~~~~~-~~~aDlV   77 (293)
T 1zej_A           13 MKVFVIG-AGLMGRGIAIAIA-SKH-------EVVLQDVSE--KALEAAREQIPE---ELLSKIEFTTTLEK-VKDCDIV   77 (293)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHH-TTS-------EEEEECSCH--HHHHHHHHHSCG---GGGGGEEEESSCTT-GGGCSEE
T ss_pred             CeEEEEe-eCHHHHHHHHHHH-cCC-------EEEEEECCH--HHHHHHHHHHHH---HHhCCeEEeCCHHH-HcCCCEE
Confidence            7999999 7999999999999 874       899999984  444321111111   11235666666654 8999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      |.+.              .++..+.+.+...+...  |++++  +||..
T Consensus        78 ieav--------------pe~~~vk~~l~~~l~~~--~~~Il--asntS  108 (293)
T 1zej_A           78 MEAV--------------FEDLNTKVEVLREVERL--TNAPL--CSNTS  108 (293)
T ss_dssp             EECC--------------CSCHHHHHHHHHHHHTT--CCSCE--EECCS
T ss_pred             EEcC--------------cCCHHHHHHHHHHHhcC--CCCEE--EEECC
Confidence            9984              23456666777777777  57644  44543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=98.24  E-value=6.2e-07  Score=84.04  Aligned_cols=169  Identities=9%  Similarity=-0.072  Sum_probs=94.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh---hhhhhHHHHhhhhcCCcc-ceEe-eC------C
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE---ALNGVKMELVDAAFPLLK-GVVA-TT------D   74 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~---~l~~~~~dl~~~~~~~~~-~~~~-~~------~   74 (332)
                      ++|.|+||+|++|++++..|+..|.       +|++++++....   .+.....++..    ... ++.. ..      .
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~   97 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGY-------EVHGLIRRSSNFNTQRINHIYIDPHN----VNKALMKLHYADLTDASS   97 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCSSCCCTTTTTTC------------CCEEEEECCTTCHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-------EEEEEecCCccccchhhhhhhhcccc----ccccceEEEECCCCCHHH
Confidence            5899999999999999999998763       789998874210   11111000000    000 1111 11      1


Q ss_pred             hhhhcCC--CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCC---CeEEEEecCcccchHH---HHHHh
Q 020022           75 AVEACTG--VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAP---NCKVLVVANPANTNAL---ILKEF  144 (332)
Q Consensus        75 ~~~al~~--aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~---~~~viv~tNP~~~~~~---~~~~~  144 (332)
                      ..+++++  .|+||++||.....  ..+....+..|+.....+++.+.+...+   .+++|++|... +...   .+.+.
T Consensus        98 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~-vyg~~~~~~~E~  176 (381)
T 1n7h_A           98 LRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE-MFGSTPPPQSET  176 (381)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-GGTTSCSSBCTT
T ss_pred             HHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHH-HhCCCCCCCCCC
Confidence            2345554  59999999865321  1234556778888888888888776421   23677766421 1000   00000


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                       ...++...++.+.....++...+++.++++...++.+.++|.
T Consensus       177 -~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp  218 (381)
T 1n7h_A          177 -TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESP  218 (381)
T ss_dssp             -SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECT
T ss_pred             -CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCC
Confidence             011222346677777777777777777765444443434453

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=98.24  E-value=1.8e-06  Score=79.48  Aligned_cols=116  Identities=10%  Similarity=0.011  Sum_probs=70.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG--   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~--   81 (332)
                      ++|||.|+||+|++|++++..|+..|.       +|+++|++.. ...+ ...++.... ....++.-.....+++++  
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~-~~~~-~l~~~~~~~-~~~~Dl~d~~~~~~~~~~~~   89 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGD-------KVVGIDNFAT-GRRE-HLKDHPNLT-FVEGSIADHALVNQLIGDLQ   89 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSS-CCGG-GSCCCTTEE-EEECCTTCHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-------EEEEEECCCc-cchh-hHhhcCCce-EEEEeCCCHHHHHHHHhccC
Confidence            357999999999999999999998763       7899988642 1110 000000000 000000000123456666  


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +|+||++||..........+ +..|+.....+++.+.+.. . .++|++|.
T Consensus        90 ~D~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~-~-~~iV~~SS  137 (333)
T 2q1w_A           90 PDAVVHTAASYKDPDDWYND-TLTNCVGGSNVVQAAKKNN-V-GRFVYFQT  137 (333)
T ss_dssp             CSEEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHTT-C-SEEEEEEE
T ss_pred             CcEEEECceecCCCccCChH-HHHHHHHHHHHHHHHHHhC-C-CEEEEECc
Confidence            99999999975432111223 7789999999999988764 2 35666664

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=98.24  E-value=4e-06  Score=79.87  Aligned_cols=171  Identities=12%  Similarity=0.027  Sum_probs=95.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh-hhhhhHHHHhhh--------hcCCc----cceE
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-ALNGVKMELVDA--------AFPLL----KGVV   70 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-~l~~~~~dl~~~--------~~~~~----~~~~   70 (332)
                      .+++|.|+||+|++|++++..|+..+.       +|+++++++... .+......+...        .....    .++.
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~  140 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSH-------RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFE  140 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEE-------EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC-
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCC-------EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCC
Confidence            356999999999999999999976653       788888875311 111111111111        00000    1111


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH---------H
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI---------L  141 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~---------~  141 (332)
                      -..... ++.++|+||++|+.... ..+..+.+..|+...+.+++.+.+ .  ...+|++|.-. + ...         +
T Consensus       141 d~~~l~-~~~~~d~Vih~A~~~~~-~~~~~~~~~~Nv~g~~~l~~aa~~-~--~~~~v~~SS~~-~-G~~~~~~~~~~~~  213 (427)
T 4f6c_A          141 CMDDVV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ-H--HARLIYVSTIS-V-GTYFDIDTEDVTF  213 (427)
T ss_dssp             --CCCC-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH-T--TCEEEEEEEGG-G-GSEECSSCSCCEE
T ss_pred             CcccCC-CcCCCCEEEECCcccCC-CCCHHHHHHHHHHHHHHHHHHHHh-c--CCcEEEECchH-h-CCCccCCCCCccc
Confidence            111122 57799999999987642 234556778899999999999988 3  24566665321 1 000         0


Q ss_pred             HHhCC--CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          142 KEFAP--SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       142 ~~~~~--~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      .+...  +.++...++.++....++...+++ .|++..-++...|+|...
T Consensus       214 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~  262 (427)
T 4f6c_A          214 SEADVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYN  262 (427)
T ss_dssp             CTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSS
T ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCC
Confidence            00000  011223456666666666666554 577777777666777644

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.23  E-value=1.4e-06  Score=77.39  Aligned_cols=156  Identities=20%  Similarity=0.185  Sum_probs=87.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC----   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al----   79 (332)
                      +.+++.|+||+|++|.+++..|+..|.       +|++.|++.  +.++....++.........++....+..+++    
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-------TVAIADIDI--ERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATV   77 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHH
Confidence            346899999999999999999999874       799999874  4443333333111000000110001112223    


Q ss_pred             ---CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           80 ---TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        80 ---~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                         .+.|++|+.||.....   ..+   ....+..|+..    ++.+.+.+.+.. +.+.||++|.....         .
T Consensus        78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~---------~  147 (259)
T 4e6p_A           78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQG-RGGKIINMASQAGR---------R  147 (259)
T ss_dssp             HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCGGGT---------S
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEECChhhc---------c
Confidence               3799999999975322   122   23445667654    444455554443 24678887754331         1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.|....++.++.-...+-+.++..++  +..|+
T Consensus       148 ~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  179 (259)
T 4e6p_A          148 GEALVAIYCATKAAVISLTQSAGLDLI--KHRIN  179 (259)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhh--hcCCE
Confidence            223222455555555667777777764  34554

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=98.23  E-value=9e-06  Score=77.73  Aligned_cols=115  Identities=16%  Similarity=0.088  Sum_probs=76.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--------------CccceE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--------------LLKGVV   70 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--------------~~~~~~   70 (332)
                      +.+|+||| .|+||..++..|+..|.       ++..+|+++  ++.+.    |+....+              ...+++
T Consensus        21 m~~IaViG-lGYVGLp~A~~~A~~G~-------~V~g~Did~--~kV~~----ln~G~~pi~Epgl~ell~~~~~~g~l~   86 (444)
T 3vtf_A           21 MASLSVLG-LGYVGVVHAVGFALLGH-------RVVGYDVNP--SIVER----LRAGRPHIYEPGLEEALGRALSSGRLS   86 (444)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTC-------EEEEECSCH--HHHHH----HHTTCCSSCCTTHHHHHHHHHHTTCEE
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCCC-------cEEEEECCH--HHHHH----HHCCCCCCCCCCHHHHHHHHHHcCCee
Confidence            46999999 89999999999998763       899999984  33322    2222111              124678


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCCCCCH-HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccch
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKEGMER-KDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTN  137 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r-~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~~  137 (332)
                      .+++..+++++||++|++.+.|...+.+. ...+   ....+.+++.++... ++.+||+- |-|+...
T Consensus        87 ~tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v---~~a~~~I~~~l~~~~-~g~lVV~eSTVppGtt  151 (444)
T 3vtf_A           87 FAESAEEAVAATDATFIAVGTPPAPDGSADLRYV---EAAARAVGRGIRAKG-RWHLVVVKSTVPPGTT  151 (444)
T ss_dssp             ECSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHH---HHHHHHHHHHHHHHC-SCCEEEECSCCCTTTT
T ss_pred             EEcCHHHHHhcCCceEEEecCCCCCCCCCCcHHH---HHHHHHHHHHHhhcC-CCeEEEEeCCCCCchH
Confidence            88899999999999999999886554321 1222   234556677776554 33444443 5577653

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=98.23  E-value=1.3e-05  Score=76.89  Aligned_cols=111  Identities=16%  Similarity=0.201  Sum_probs=76.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--------------CccceE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--------------LLKGVV   70 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--------------~~~~~~   70 (332)
                      ..+|+||| +|.||..+|..|+..|.       +++++|+++  ++.+.    +.....+              ...+++
T Consensus         8 ~~~~~vIG-lG~vG~~~A~~La~~G~-------~V~~~D~~~--~kv~~----l~~g~~~~~epgl~~~~~~~~~~g~l~   73 (446)
T 4a7p_A            8 SVRIAMIG-TGYVGLVSGACFSDFGH-------EVVCVDKDA--RKIEL----LHQNVMPIYEPGLDALVASNVKAGRLS   73 (446)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCS--TTHHH----HTTTCCSSCCTTHHHHHHHHHHTTCEE
T ss_pred             ceEEEEEc-CCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHH----HhcCCCCccCCCHHHHHHhhcccCCEE
Confidence            46899999 79999999999998763       899999985  33332    2221111              123578


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCC-CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-Cccc
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKE-GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPAN  135 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~-~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~  135 (332)
                      .+++..+++++||+||++.+.|... +.      .-++..+++.++.|.++..++.+||..| -|.+
T Consensus        74 ~ttd~~ea~~~aDvvii~Vptp~~~~~~------~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pg  134 (446)
T 4a7p_A           74 FTTDLAEGVKDADAVFIAVGTPSRRGDG------HADLSYVFAAAREIAENLTKPSVIVTKSTVPVG  134 (446)
T ss_dssp             EESCHHHHHTTCSEEEECCCCCBCTTTC------CBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTT
T ss_pred             EECCHHHHHhcCCEEEEEcCCCCccccC------CccHHHHHHHHHHHHHhcCCCCEEEEeCCCCch
Confidence            8888889999999999998877542 11      1244556666777777665666665554 3544

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.22  E-value=1.2e-05  Score=70.95  Aligned_cols=154  Identities=22%  Similarity=0.205  Sum_probs=89.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~   76 (332)
                      |+.+.++|.|+||+|.+|.+++..|+..|.       +++++|+++  +.++....++..... ...-+... ++   ..
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~   74 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGA-------AVVVADINA--EAAEAVAKQIVADGG-TAISVAVDVSDPESAK   74 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTC-EEEEEECCTTSHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCC-cEEEEEccCCCHHHHH
Confidence            444567899999999999999999999874       799999874  444433333332110 00000110 11   11


Q ss_pred             h-------hcCCCcEEEEeCCCCC---C---CCCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           77 E-------ACTGVNIAVMVGGFPR---K---EGME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        77 ~-------al~~aDiVi~~ag~~~---~---~~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      +       .+...|++|+.||...   .   ...+   ....+..|+..    .+.+.+.+.+..  .++||++|.....
T Consensus        75 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~  152 (253)
T 3qiv_A           75 AMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG--GGAIVNQSSTAAW  152 (253)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEECC----
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CCEEEEECCcccc
Confidence            2       2237899999999731   1   1123   23456677765    667777776654  3677777754321


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                                  +....++.++.....+-+.+++.+.  +..|+
T Consensus       153 ------------~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  182 (253)
T 3qiv_A          153 ------------LYSNYYGLAKVGINGLTQQLSRELG--GRNIR  182 (253)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHTT--TTTEE
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence                        1122456777776778888888875  34565

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=98.21  E-value=6.9e-07  Score=76.05  Aligned_cols=135  Identities=9%  Similarity=0.034  Sum_probs=80.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh---cCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA---CTG   81 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a---l~~   81 (332)
                      +|||.|+||+|++|++++..|+ .|.       +++++|+++  +.   ...|+.+..           +..++   +..
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~-------~V~~~~r~~--~~---~~~D~~~~~-----------~~~~~~~~~~~   58 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKA-------EVITAGRHS--GD---VTVDITNID-----------SIKKMYEQVGK   58 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTS-------EEEEEESSS--SS---EECCTTCHH-----------HHHHHHHHHCC
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCC-------eEEEEecCc--cc---eeeecCCHH-----------HHHHHHHHhCC
Confidence            3589999999999999999998 763       799999874  11   123333221           11122   245


Q ss_pred             CcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           82 VNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        82 aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      .|+||++||......   .+.   ...+..|+.....+.+.+.++..+..+++++|.....         .+.+....++
T Consensus        59 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~---------~~~~~~~~Y~  129 (202)
T 3d7l_A           59 VDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMME---------DPIVQGASAA  129 (202)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGT---------SCCTTCHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhc---------CCCCccHHHH
Confidence            899999999753221   232   3445778888878887776653223567777643221         1223222344


Q ss_pred             echHHHHHHHHHHHHHc
Q 020022          156 LTRLDHNRALGQISEKL  172 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l  172 (332)
                      .++.....+.+.+++.+
T Consensus       130 ~sK~~~~~~~~~~~~e~  146 (202)
T 3d7l_A          130 MANGAVTAFAKSAAIEM  146 (202)
T ss_dssp             HHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHHHc
Confidence            44444445555555544

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=98.21  E-value=2.8e-06  Score=86.40  Aligned_cols=105  Identities=20%  Similarity=0.204  Sum_probs=70.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH----HHhhhhcC----------Cccce
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM----ELVDAAFP----------LLKGV   69 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~----dl~~~~~~----------~~~~~   69 (332)
                      +.+||+||| +|.||+.++..++..|.       +|+++|+++  +.++.-..    .+......          ...++
T Consensus       313 ~i~kV~VIG-aG~MG~~iA~~la~aG~-------~V~l~D~~~--~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i  382 (715)
T 1wdk_A          313 DVKQAAVLG-AGIMGGGIAYQSASKGT-------PILMKDINE--HGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGI  382 (715)
T ss_dssp             CCSSEEEEC-CHHHHHHHHHHHHHTTC-------CEEEECSSH--HHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHE
T ss_pred             cCCEEEEEC-CChhhHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCe
Confidence            357899999 69999999999998874       799999985  33321100    01100000          01246


Q ss_pred             EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        70 ~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      +.+++. +++++||+||.+.              .++..+.+++...+.++++|+++  ++||...
T Consensus       383 ~~~~d~-~~~~~aDlVIeaV--------------~e~~~vk~~v~~~l~~~~~~~~I--lasntSt  431 (715)
T 1wdk_A          383 RPTLSY-GDFGNVDLVVEAV--------------VENPKVKQAVLAEVENHVREDAI--LASNTST  431 (715)
T ss_dssp             EEESSS-TTGGGCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTTCE--EEECCSS
T ss_pred             EEECCH-HHHCCCCEEEEcC--------------CCCHHHHHHHHHHHHhhCCCCeE--EEeCCCC
Confidence            667666 7899999999984              23556677888889888877763  4566544

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=98.20  E-value=1.7e-06  Score=80.11  Aligned_cols=103  Identities=20%  Similarity=0.222  Sum_probs=64.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH-HH--hhhhcCCccceEeeCChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM-EL--VDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~-dl--~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      +.|||+||| +|.+|+.++..|...|.       ++.++|+++   .++.... .+  .........++..+++.. ++.
T Consensus         2 ~~mkI~IiG-aG~~G~~~a~~L~~~g~-------~V~~~~r~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~   69 (335)
T 3ghy_A            2 SLTRICIVG-AGAVGGYLGARLALAGE-------AINVLARGA---TLQALQTAGLRLTEDGATHTLPVRATHDAA-ALG   69 (335)
T ss_dssp             CCCCEEEES-CCHHHHHHHHHHHHTTC-------CEEEECCHH---HHHHHHHTCEEEEETTEEEEECCEEESCHH-HHC
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEEEChH---HHHHHHHCCCEEecCCCeEEEeeeEECCHH-HcC
Confidence            357999999 69999999999998763       699999852   2221110 00  000000112334455554 479


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      ++|+||++.-.                ..++++++.+..+..|+..|+.++|.+
T Consensus        70 ~~D~Vilavk~----------------~~~~~~~~~l~~~l~~~~~iv~~~nGi  107 (335)
T 3ghy_A           70 EQDVVIVAVKA----------------PALESVAAGIAPLIGPGTCVVVAMNGV  107 (335)
T ss_dssp             CCSEEEECCCH----------------HHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred             CCCEEEEeCCc----------------hhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence            99999998421                224466666766655677788889985

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.20  E-value=1.2e-06  Score=78.93  Aligned_cols=100  Identities=19%  Similarity=0.210  Sum_probs=70.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC--Cc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG--VN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~--aD   83 (332)
                      |||.|+||+|++|++++..|+ .|.       +|+.+++++  ..   ...|+.+..           ...+++++  +|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~-------~V~~~~r~~--~~---~~~D~~d~~-----------~~~~~~~~~~~d   56 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVG-------NLIALDVHS--KE---FCGDFSNPK-----------GVAETVRKLRPD   56 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTS-------EEEEECTTC--SS---SCCCTTCHH-----------HHHHHHHHHCCS
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCC-------eEEEecccc--cc---ccccCCCHH-----------HHHHHHHhcCCC
Confidence            489999999999999999988 652       789998863  11   122333221           23455665  99


Q ss_pred             EEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           84 IAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        84 iVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +||++||....  ...+..+.+..|+...+.+++.+.+..   .++|++|.
T Consensus        57 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~---~~~v~~SS  104 (299)
T 1n2s_A           57 VIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG---AWVVHYST  104 (299)
T ss_dssp             EEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT---CEEEEEEE
T ss_pred             EEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC---CcEEEEec
Confidence            99999986531  123556778899999999999988754   35666654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=98.20  E-value=1.7e-06  Score=77.75  Aligned_cols=99  Identities=13%  Similarity=0.174  Sum_probs=70.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--C
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--G   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~   81 (332)
                      .++||.|+||+|++|++++..|+..|.       +|+.++++.         .|+.+..           ...++++  +
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~---------~Dl~d~~-----------~~~~~~~~~~   63 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNV-------EVIPTDVQD---------LDITNVL-----------AVNKFFNEKK   63 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSE-------EEEEECTTT---------CCTTCHH-----------HHHHHHHHHC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCC-------eEEeccCcc---------CCCCCHH-----------HHHHHHHhcC
Confidence            358999999999999999999988763       788888752         2333221           2344455  7


Q ss_pred             CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           82 VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        82 aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +|+||++||.....  ..+..+.+..|+.....+++.+.+..   .++|++|.
T Consensus        64 ~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~---~~iv~~SS  113 (292)
T 1vl0_A           64 PNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG---AEIVQIST  113 (292)
T ss_dssp             CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT---CEEEEEEE
T ss_pred             CCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEech
Confidence            99999999865311  12455678889999999999988864   25666654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=98.20  E-value=2.9e-06  Score=74.18  Aligned_cols=115  Identities=17%  Similarity=0.177  Sum_probs=72.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhc--ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARG--VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      +++++|.|+||+|++|++++..|+..  +.       +|+++++++  +.+.    ++.........++.-..+..++++
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~-------~V~~~~r~~--~~~~----~~~~~~~~~~~D~~d~~~~~~~~~   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKF-------VAKGLVRSA--QGKE----KIGGEADVFIGDITDADSINPAFQ   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTC-------EEEEEESCH--HHHH----HTTCCTTEEECCTTSHHHHHHHHT
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCc-------EEEEEEcCC--Cchh----hcCCCeeEEEecCCCHHHHHHHHc
Confidence            35679999999999999999999987  32       789999873  2221    111000000001111123456788


Q ss_pred             CCcEEEEeCCCCCC------------CCC---CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           81 GVNIAVMVGGFPRK------------EGM---ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        81 ~aDiVi~~ag~~~~------------~~~---~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ++|+||+++|....            +..   .....+..|+.....+++.+.+...  .++|++|.
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~iv~~SS  133 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV--KHIVVVGS  133 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTC--SEEEEEEE
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCC--CEEEEEcC
Confidence            99999999986431            110   1123467888889999999988753  35666653

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.19  E-value=4.8e-06  Score=74.06  Aligned_cols=149  Identities=16%  Similarity=0.127  Sum_probs=83.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~---   80 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++.........++....+..++++   
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   76 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-------KVVFGDILD--EEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAV   76 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHH
Confidence            347899999999999999999998774       799999874  33332222222110000000000011223333   


Q ss_pred             ----CCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           81 ----GVNIAVMVGGFPRKE---GME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        81 ----~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                          +.|++|+.||.....   ..+   ....+..|+...    +.+.+.+++..  .++||++|.....         .
T Consensus        77 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~---------~  145 (260)
T 1nff_A           77 TAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG--RGSIINISSIEGL---------A  145 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT---------S
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCEEEEEeehhhc---------C
Confidence                799999999975421   122   234556666554    56666666553  3577777754321         1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHc
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                      +.|....++.++.....+-+.+++.+
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~la~e~  171 (260)
T 1nff_A          146 GTVACHGYTATKFAVRGLTKSTALEL  171 (260)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            22222234444554556666666665

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=98.19  E-value=1.7e-06  Score=76.24  Aligned_cols=155  Identities=15%  Similarity=0.124  Sum_probs=86.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chhhh
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAVEA   78 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~~a   78 (332)
                      ++.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++.... ....-+... +   +..++
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~   78 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGA-------SVVVSDINA--DAANHVVDEIQQLG-GQAFACRCDITSEQELSAL   78 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTC-------EEEEEESCH--HHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHH
Confidence            3457899999999999999999998763       799999874  33333333332211 000001110 1   12223


Q ss_pred             c-------CCCcEEEEeCCCCCCC--CCC---HHHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcccchHHHHH
Q 020022           79 C-------TGVNIAVMVGGFPRKE--GME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        79 l-------~~aDiVi~~ag~~~~~--~~~---r~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                      +       .+.|+||+.||.....  ..+   ....+..|+.....+.+.+    ++..  ..+|+++|.....      
T Consensus        79 ~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~iv~~sS~~~~------  150 (255)
T 1fmc_A           79 ADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG--GGVILTITSMAAE------  150 (255)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT------
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEEcchhhc------
Confidence            3       3899999999975421  223   2345566776654444444    4443  3567777753321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.++...++.++.....+.+.+++.+.  +..++
T Consensus       151 ---~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~  183 (255)
T 1fmc_A          151 ---NKNINMTSYASSKAAASHLVRNMAFDLG--EKNIR  183 (255)
T ss_dssp             ---CCCTTCHHHHHHHHHHHHHHHHHHHHHH--TTTEE
T ss_pred             ---CCCCCCcccHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence               1223222455555555666667776663  34555

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=98.18  E-value=4.6e-06  Score=72.64  Aligned_cols=157  Identities=18%  Similarity=0.167  Sum_probs=82.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh---
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE---   77 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~---   77 (332)
                      |+.+.++|.|+||+|++|++++..|+..|.       +|.+.|+++  +.++....++.... ....++....+..+   
T Consensus         1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~   70 (234)
T 2ehd_A            1 MEGMKGAVLITGASRGIGEATARLLHAKGY-------RVGLMARDE--KRLQALAAELEGAL-PLPGDVREEGDWARAVA   70 (234)
T ss_dssp             ---CCCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHSTTCE-EEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhhhce-EEEecCCCHHHHHHHHH
Confidence            766667899999999999999999998763       789999874  33332222221100 00000000001112   


Q ss_pred             ----hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           78 ----ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                          .+.+.|+||+.||.....   ..+   ....+..|+...    +.+.+.+++..  ..+||++|.....       
T Consensus        71 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~-------  141 (234)
T 2ehd_A           71 AMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG--GGTIVNVGSLAGK-------  141 (234)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT--CEEEEEECCTTTT-------
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CcEEEEECCchhc-------
Confidence                234789999999975321   122   234556666544    45555555432  3677777753321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.+....++.++.....+.+.++..+.  +..++
T Consensus       142 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  174 (234)
T 2ehd_A          142 --NPFKGGAAYNASKFGLLGLAGAAMLDLR--EANVR  174 (234)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             --CCCCCCchhhHHHHHHHHHHHHHHHHHh--hcCcE
Confidence              1122222344444444455555665543  33555

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=98.18  E-value=1.9e-06  Score=78.40  Aligned_cols=160  Identities=17%  Similarity=0.177  Sum_probs=95.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHhc--ccCCCCCceEEEEEeCCCchhh-hhhhHHHHhhhhcCCccceEeeCChhhhcC--C
Q 020022            7 RVLVTGAAGQIGYALVPMIARG--VMLGTDQPVILHMLDIPPAAEA-LNGVKMELVDAAFPLLKGVVATTDAVEACT--G   81 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~-l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~   81 (332)
                      ||.|+||+|++|++++..|+..  +.       +|+++|++..... ..-...|+.+.           ....++++  +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~~~~~~~~~~~~~D~~d~-----------~~~~~~~~~~~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKK-------NVIASDIVQRDTGGIKFITLDVSNR-----------DEIDRAVEKYS   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGG-------GEEEEESSCCCCTTCCEEECCTTCH-----------HHHHHHHHHTT
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCC-------EEEEecCCCccccCceEEEecCCCH-----------HHHHHHHhhcC
Confidence            5899999999999999999876  42       5888887642110 00001122111           12344555  8


Q ss_pred             CcEEEEeCCCCCCC-CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEe
Q 020022           82 VNIAVMVGGFPRKE-GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCL  156 (332)
Q Consensus        82 aDiVi~~ag~~~~~-~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~  156 (332)
                      +|+||++|+..... ..+..+.+..|+.....+++.+.+...  .++|++|...-.-..    ...+. +-..+...++.
T Consensus        63 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~v~~SS~~~~~~~~~~~~~~e~-~~~~p~~~Y~~  139 (317)
T 3ajr_A           63 IDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRV--EKVVIPSTIGVFGPETPKNKVPSI-TITRPRTMFGV  139 (317)
T ss_dssp             CCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEEEEGGGCCTTSCSSSBCSS-SCCCCCSHHHH
T ss_pred             CcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCC--CEEEEecCHHHhCCCCCCCCcccc-ccCCCCchHHH
Confidence            99999999864311 123456778899999999999887652  256666532210000    00000 00112234666


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      ++....++...+++..+++..-++...++|.
T Consensus       140 sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~  170 (317)
T 3ajr_A          140 TKIAAELLGQYYYEKFGLDVRSLRYPGIISY  170 (317)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECS
T ss_pred             HHHHHHHHHHHHHHhcCCeEEEEecCcEecc
Confidence            7777777777777777887777775556674

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=98.17  E-value=4.8e-06  Score=74.67  Aligned_cols=158  Identities=15%  Similarity=0.240  Sum_probs=87.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eC---C---hhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TT---D---AVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~---~---~~~   77 (332)
                      .++|.|+||+|++|.+++..|+..|.       +|.+++++.  +.++....++......  .++.. ..   +   ..+
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~  100 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQQGL-------KVVGCARTV--GNIEELAAECKSAGYP--GTLIPYRCDLSNEEDILS  100 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCS--SEEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCh--HHHHHHHHHHHhcCCC--ceEEEEEecCCCHHHHHH
Confidence            46899999999999999999998764       789999874  3333333333221100  11111 11   1   112


Q ss_pred             h-------cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           78 A-------CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        78 a-------l~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                      +       +.+.|+||+.||......   .+   ....+..|+..    .+.+.+.+++...+...||++|......   
T Consensus       101 ~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~---  177 (279)
T 1xg5_A          101 MFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR---  177 (279)
T ss_dssp             HHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS---
T ss_pred             HHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcc---
Confidence            2       237999999999754221   22   23456677766    7777888777642235677776533210   


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          ....+....++.++.....+.+.+++.+...+..|+
T Consensus       178 ----~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~  213 (279)
T 1xg5_A          178 ----VLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIR  213 (279)
T ss_dssp             ----CCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred             ----cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeE
Confidence                001111112344444444555666666553345565

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=98.17  E-value=1.5e-05  Score=73.11  Aligned_cols=171  Identities=15%  Similarity=0.077  Sum_probs=95.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---ChhhhcC-
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAVEACT-   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~~al~-   80 (332)
                      |||.|+||+|++|++++..|+..|.       +|+++|+.....  ......+.........-+... +   ...++++ 
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~-------~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   71 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGH-------DVIILDNLCNSK--RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD   71 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSCC--TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEecCCCcc--hhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc
Confidence            4899999999999999999998763       788888642110  111111211100000001111 1   1234444 


Q ss_pred             -CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcE
Q 020022           81 -GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNI  153 (332)
Q Consensus        81 -~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i  153 (332)
                       ++|+||++||.....  ..+..+.+..|+.....+++.+++...  .++|++|.. .+...    .+.+..+.-|....
T Consensus        72 ~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~iv~~SS~-~~~g~~~~~~~~e~~~~~~~~~~  148 (338)
T 1udb_A           72 HAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANV--KNFIFSSSA-TVYGDNPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             TTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEG-GGGCSCCSSSBCTTSCCCCCSSH
T ss_pred             cCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCC--CeEEEEccH-HHhCCCCCCCcCcccCCCCCCCh
Confidence             589999999864311  123456778899999999998887652  356666532 11000    00000000011234


Q ss_pred             EEechHHHHHHHHHHHHHc-CCCCCCeeeeEEEecc
Q 020022          154 TCLTRLDHNRALGQISEKL-NVQVSDVKNVIIWGNH  188 (332)
Q Consensus       154 ~~~t~lds~r~~~~la~~l-~v~~~~v~~~~v~G~h  188 (332)
                      ++.++....++...+++.. +++..-++...++|.|
T Consensus       149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~  184 (338)
T 1udb_A          149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCC
Confidence            5667777777777777665 6665666666667764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=98.16  E-value=4.8e-06  Score=74.77  Aligned_cols=104  Identities=14%  Similarity=0.185  Sum_probs=66.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al~~aD   83 (332)
                      |||.|+||+|++|++++..|+.. +.       +|+++++++  +.+..    +...... ...++.-.....++++++|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~-------~V~~~~R~~--~~~~~----~~~~~v~~~~~D~~d~~~l~~~~~~~d   67 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHID-------HFHIGVRNV--EKVPD----DWRGKVSVRQLDYFNQESMVEAFKGMD   67 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCT-------TEEEEESSG--GGSCG----GGBTTBEEEECCTTCHHHHHHHTTTCS
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCC-------cEEEEECCH--HHHHH----hhhCCCEEEEcCCCCHHHHHHHHhCCC
Confidence            47999999999999999998875 42       588888874  22221    1110000 0001111123567899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +||+++|....        ...|+...+.+++.+++...  .+++++|.
T Consensus        68 ~vi~~a~~~~~--------~~~~~~~~~~l~~aa~~~gv--~~iv~~Ss  106 (289)
T 3e48_A           68 TVVFIPSIIHP--------SFKRIPEVENLVYAAKQSGV--AHIIFIGY  106 (289)
T ss_dssp             EEEECCCCCCS--------HHHHHHHHHHHHHHHHHTTC--CEEEEEEE
T ss_pred             EEEEeCCCCcc--------chhhHHHHHHHHHHHHHcCC--CEEEEEcc
Confidence            99999986521        13477888899999888763  25666653

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=98.16  E-value=3.3e-06  Score=81.94  Aligned_cols=168  Identities=15%  Similarity=0.076  Sum_probs=100.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC------------CccceEe
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP------------LLKGVVA   71 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~------------~~~~~~~   71 (332)
                      .+++|.|+||+|++|++++..|+..+-.+    .+|++++++++.....   ..+.+....            ...++..
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g----~~V~~l~R~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~v~~  144 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVD----GRLICLVRAESDEDAR---RRLEKTFDSGDPELLRHFKELAADRLEV  144 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTT----CEEEEEECSSSHHHHH---HHHHGGGCSSCHHHHHHHHHHHTTTEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCC----CEEEEEECCCCcHHHH---HHHHHHHHhcchhhhhhhhhhccCceEE
Confidence            45799999999999999999998862110    1799999875321110   111110000            0011211


Q ss_pred             -eC------------ChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           72 -TT------------DAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        72 -~~------------~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                       ..            ...++++++|+||++|+....  .+..+.+..|+...+++++.+.+...+  +++++|.- .+  
T Consensus       145 v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~~--~~V~iSS~-~v--  217 (478)
T 4dqv_A          145 VAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTKLK--PFTYVSTA-DV--  217 (478)
T ss_dssp             EECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSSCC--CEEEEEEG-GG--
T ss_pred             EEeECCCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEeeh-hh--
Confidence             11            134556789999999997643  333456788999999999998876532  45555541 11  


Q ss_pred             HHHHHhCCC-CCC-----------------CcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          139 LILKEFAPS-IPA-----------------KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       139 ~~~~~~~~~-~~~-----------------~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      +-  ...++ +..                 ...++.++....++...+++..|++..-++...|+|.
T Consensus       218 ~~--~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          218 GA--AIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILAD  282 (478)
T ss_dssp             GT--TSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECC
T ss_pred             cC--ccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCC
Confidence            00  00000 000                 0125667777777877787777988888887777774

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=98.16  E-value=9.8e-06  Score=71.52  Aligned_cols=148  Identities=15%  Similarity=0.140  Sum_probs=83.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeCC---h-
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATTD---A-   75 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~~---~-   75 (332)
                      |+++.++|.|+||+|++|.+++..|+..|. .     .++++|+++.++.+    .++.... + ..++. ...|   . 
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~-~-----~v~~~~r~~~~~~~----~~l~~~~-~-~~~~~~~~~D~~~~~   68 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNL-K-----NFVILDRVENPTAL----AELKAIN-P-KVNITFHTYDVTVPV   68 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCC-S-----EEEEEESSCCHHHH----HHHHHHC-T-TSEEEEEECCTTSCH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCC-c-----EEEEEecCchHHHH----HHHHHhC-C-CceEEEEEEecCCCh
Confidence            766778999999999999999999998763 1     38889987532222    1222210 0 00111 1111   1 


Q ss_pred             ---hh-------hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcC-----CCeEEEEecCcccchHHH
Q 020022           76 ---VE-------ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA-----PNCKVLVVANPANTNALI  140 (332)
Q Consensus        76 ---~~-------al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~-----~~~~viv~tNP~~~~~~~  140 (332)
                         .+       .+.+.|++|+.||...  ..+....+..|+.....+.+.+..+..     +.+.||++|.....    
T Consensus        69 ~~~~~~~~~~~~~~g~id~lv~~Ag~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~----  142 (254)
T 1sby_A           69 AESKKLLKKIFDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF----  142 (254)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT----
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCC--HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhc----
Confidence               11       1237899999999752  244566777787665555555443221     13667777754331    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHH
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEK  171 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~  171 (332)
                           .+.+....++.++.....+-+.+++.
T Consensus       143 -----~~~~~~~~Y~~sK~a~~~~~~~la~~  168 (254)
T 1sby_A          143 -----NAIHQVPVYSASKAAVVSFTNSLAKL  168 (254)
T ss_dssp             -----SCCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCCCchHHHHHHHHHHHHHHHHHHH
Confidence                 11222223444444444555555554

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.15  E-value=7.3e-06  Score=72.73  Aligned_cols=155  Identities=14%  Similarity=0.135  Sum_probs=86.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEee-C---Chhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVAT-T---DAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~-~---~~~~a   78 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++...... ...-+... +   +..++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   76 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-------RLLLFSRNR--EKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRL   76 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHH
Confidence            457899999999999999999998773       799999874  3343333333321000 00001111 1   11223


Q ss_pred             cC------CCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           79 CT------GVNIAVMVGGFPRKE---GME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        79 l~------~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                      ++      +.|++|+.||.....   ..+   ....+..|+...    +.+.+.+.+..  ..+||++|.....      
T Consensus        77 ~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------  148 (260)
T 2z1n_A           77 FEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG--WGRMVYIGSVTLL------  148 (260)
T ss_dssp             HHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT------
T ss_pred             HHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEECchhhc------
Confidence            33      599999999975421   122   234556676554    55666665543  3567777754321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+....++.++.....+-+.+++.+.  +..|+
T Consensus       149 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  181 (260)
T 2z1n_A          149 ---RPWQDLALSNIMRLPVIGVVRTLALELA--PHGVT  181 (260)
T ss_dssp             ---SCCTTBHHHHHHTHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---CCCCCCchhHHHHHHHHHHHHHHHHHHh--hhCeE
Confidence               1222222344444444566666776663  33454

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=98.15  E-value=6.1e-06  Score=74.47  Aligned_cols=100  Identities=14%  Similarity=0.181  Sum_probs=64.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +++||+||| +|.+|.+++..|+..+. .   +.+|.++|+++  ++++    .+.+.     ..+..+++..+++++||
T Consensus         2 ~~~~I~iIG-~G~mG~aia~~l~~~g~-~---~~~V~v~dr~~--~~~~----~l~~~-----~gi~~~~~~~~~~~~aD   65 (280)
T 3tri_A            2 NTSNITFIG-GGNMARNIVVGLIANGY-D---PNRICVTNRSL--DKLD----FFKEK-----CGVHTTQDNRQGALNAD   65 (280)
T ss_dssp             CCSCEEEES-CSHHHHHHHHHHHHTTC-C---GGGEEEECSSS--HHHH----HHHHT-----TCCEEESCHHHHHSSCS
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHHCCC-C---CCeEEEEeCCH--HHHH----HHHHH-----cCCEEeCChHHHHhcCC
Confidence            457999999 69999999999998763 1   11589999985  3332    12221     02345667888999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-cCCCeEEEEecCccc
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH-AAPNCKVLVVANPAN  135 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~~viv~tNP~~  135 (332)
                      +||++.  +  +            ..++++.+.+..+ .+++..++.+++.+.
T Consensus        66 vVilav--~--p------------~~~~~vl~~l~~~~l~~~~iiiS~~agi~  102 (280)
T 3tri_A           66 VVVLAV--K--P------------HQIKMVCEELKDILSETKILVISLAVGVT  102 (280)
T ss_dssp             EEEECS--C--G------------GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred             eEEEEe--C--H------------HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence            999985  1  1            1234555556655 445555555555443

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=98.15  E-value=2.8e-06  Score=73.85  Aligned_cols=95  Identities=13%  Similarity=0.123  Sum_probs=62.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEE-EeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHM-LDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L-~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ++|||+||| +|.+|.+++..|...+.       ++.+ +|+++  ++++....++..       .  ...+..++++++
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~-------~V~~v~~r~~--~~~~~l~~~~g~-------~--~~~~~~~~~~~a   82 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQI-------PAIIANSRGP--ASLSSVTDRFGA-------S--VKAVELKDALQA   82 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTC-------CEEEECTTCG--GGGHHHHHHHTT-------T--EEECCHHHHTTS
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEECCCH--HHHHHHHHHhCC-------C--cccChHHHHhcC
Confidence            457999999 79999999999998763       5777 99874  444332222210       1  123455678999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      |+||++.-    +            ..++++++.+.. . ++..|+-++||..
T Consensus        83 DvVilavp----~------------~~~~~v~~~l~~-~-~~~ivi~~~~g~~  117 (220)
T 4huj_A           83 DVVILAVP----Y------------DSIADIVTQVSD-W-GGQIVVDASNAID  117 (220)
T ss_dssp             SEEEEESC----G------------GGHHHHHTTCSC-C-TTCEEEECCCCBC
T ss_pred             CEEEEeCC----h------------HHHHHHHHHhhc-c-CCCEEEEcCCCCC
Confidence            99999852    1            123344455544 3 4567778899885

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.14  E-value=2.8e-06  Score=74.16  Aligned_cols=141  Identities=16%  Similarity=0.029  Sum_probs=80.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA------   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a------   78 (332)
                      .++|.|+||+|++|.+++..|+..|.       +++++|+++..+.+.....|+.+..           +..++      
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~~~~~~~~~~~~D~~~~~-----------~~~~~~~~~~~   63 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGY-------RVVVLDLRREGEDLIYVEGDVTREE-----------DVRRAVARAQE   63 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-------EEEEEESSCCSSSSEEEECCTTCHH-----------HHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEccCccccceEEEeCCCCCHH-----------HHHHHHHHHHh
Confidence            35899999999999999999998763       7899998752111111112332211           11222      


Q ss_pred             cCCCcEEEEeCCCCCCCC------C----CHHHHHHhhHHHHHHHHHHHHhhcCC--------CeEEEEecCcccchHHH
Q 020022           79 CTGVNIAVMVGGFPRKEG------M----ERKDVMSKNVSIYKAQASALEQHAAP--------NCKVLVVANPANTNALI  140 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~------~----~r~~~~~~n~~i~~~i~~~i~~~~~~--------~~~viv~tNP~~~~~~~  140 (332)
                      +.+.|++|+.||......      .    +....+..|+.....+.+.+.+...+        ..++|++|.....    
T Consensus        64 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----  139 (242)
T 1uay_A           64 EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF----  139 (242)
T ss_dssp             HSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH----
T ss_pred             hCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc----
Confidence            237899999999754221      1    23455667776666666655544211        1367777643221    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHc
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                         .  +.+....++.++.....+.+.+++.+
T Consensus       140 ---~--~~~~~~~Y~~sK~a~~~~~~~l~~e~  166 (242)
T 1uay_A          140 ---E--GQIGQAAYAASKGGVVALTLPAAREL  166 (242)
T ss_dssp             ---H--CCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---c--CCCCCchhhHHHHHHHHHHHHHHHHH
Confidence               1  12222234555554455666666665

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.14  E-value=5.4e-06  Score=72.43  Aligned_cols=155  Identities=12%  Similarity=0.064  Sum_probs=88.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh----hHHHHhhhhcCCccceEeeCChhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG----VKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~----~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       +|++.|+++.  .+.+    ...|+.+....  ..  ......+.+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~D~~~~~~~--~~--~~~~~~~~~   68 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGY-------TVLNIDLSAN--DQADSNILVDGNKNWTEQE--QS--ILEQTASSL   68 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTE-------EEEEEESSCC--TTSSEEEECCTTSCHHHHH--HH--HHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEecCcc--ccccccEEEeCCCCCHHHH--HH--HHHHHHHHh
Confidence            346899999999999999999998874       7999998752  2211    11222211100  00  000111222


Q ss_pred             --CCCcEEEEeCCCCCCC----CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022           80 --TGVNIAVMVGGFPRKE----GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA  150 (332)
Q Consensus        80 --~~aDiVi~~ag~~~~~----~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~  150 (332)
                        .+.|+||+.||.....    ..+   ....+..|+.....+.+.+..+..+.+.||++|.....         .+.|.
T Consensus        69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~---------~~~~~  139 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM---------GPTPS  139 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG---------SCCTT
T ss_pred             CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhc---------cCCCC
Confidence              4789999999975321    111   23456778877777777666553223577777754331         12232


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ...++.++.....+-+.+++.++..+..|+
T Consensus       140 ~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~  169 (236)
T 1ooe_A          140 MIGYGMAKAAVHHLTSSLAAKDSGLPDNSA  169 (236)
T ss_dssp             BHHHHHHHHHHHHHHHHHHSTTSSCCTTCE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcccCCCeE
Confidence            223455555555666677776653355665

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.14  E-value=1.2e-05  Score=72.22  Aligned_cols=158  Identities=17%  Similarity=0.181  Sum_probs=87.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh----
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV----   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~----   76 (332)
                      |+.+.+++.|+||+|.+|.+++..|+..|.       ++++.|+++  +.++....++..........++...+..    
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   93 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGA-------YVVVADVNE--DAAVRVANEIGSKAFGVRVDVSSAKDAESMVE   93 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceEEEEecCCCHHHHHHHHH
Confidence            334457899999999999999999999874       799999874  3333222222110000000000000111    


Q ss_pred             ---hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHH----HHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           77 ---EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYK----AQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        77 ---~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~----~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                         +.+...|++|+.||.....   ..+   .+..+..|+....    .+.+.+++..  .+.||++|.....       
T Consensus        94 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~-------  164 (277)
T 4dqx_A           94 KTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG--GGSIINTTSYTAT-------  164 (277)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT--CEEEEEECCGGGT-------
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CcEEEEECchhhC-------
Confidence               2233789999999975422   122   2344566765544    4444444432  3677777754321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.+....++.++.-...+-+.++..++  +..|+
T Consensus       165 --~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~  197 (277)
T 4dqx_A          165 --SAIADRTAYVASKGAISSLTRAMAMDHA--KEGIR  197 (277)
T ss_dssp             --SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             --cCCCCChhHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence              1223222455555555667777777764  34555

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=98.14  E-value=8.6e-06  Score=75.63  Aligned_cols=114  Identities=16%  Similarity=0.178  Sum_probs=69.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh---hhhhhHHHHhhhh----cCCccceEeeCChh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE---ALNGVKMELVDAA----FPLLKGVVATTDAV   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~---~l~~~~~dl~~~~----~~~~~~~~~~~~~~   76 (332)
                      .+|||+||| +|.+|+.++..|+..|...+....+|.++|+++...   .++.....-....    .....++..+++..
T Consensus         7 ~~mkI~iIG-~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (354)
T 1x0v_A            7 ASKKVCIVG-SGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVV   85 (354)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHH
Confidence            457999999 699999999999887621000001799999875200   2221111000000    01123466677777


Q ss_pred             hhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           77 EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      +++++||+||++.-.                ..++++.+.+..+..++.+|+.++|..
T Consensus        86 ~~~~~aD~Vilav~~----------------~~~~~v~~~i~~~l~~~~ivv~~~~Gi  127 (354)
T 1x0v_A           86 QAAEDADILIFVVPH----------------QFIGKICDQLKGHLKANATGISLIKGV  127 (354)
T ss_dssp             HHHTTCSEEEECCCG----------------GGHHHHHHHHTTCSCTTCEEEECCCCB
T ss_pred             HHHcCCCEEEEeCCH----------------HHHHHHHHHHHhhCCCCCEEEEECCcc
Confidence            889999999998421                124456667777665677777777744

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.13  E-value=8e-07  Score=79.87  Aligned_cols=103  Identities=15%  Similarity=0.147  Sum_probs=66.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh----hHHHHhhhhcCCccceEeeCChhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG----VKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~----~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      ++|||.|+| +|++|++++..|+..|.       +|+.+++++.  .+..    ...|+.+.           ....+++
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~~~~Dl~d~-----------~~~~~~~   60 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGH-------EVTGLRRSAQ--PMPAGVQTLIADVTRP-----------DTLASIV   60 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTC-------CEEEEECTTS--CCCTTCCEEECCTTCG-----------GGCTTGG
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCcc--ccccCCceEEccCCCh-----------HHHHHhh
Confidence            346899999 59999999999998763       6888888742  2210    01122211           1234556


Q ss_pred             CC-CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           80 TG-VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        80 ~~-aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ++ +|+||++|+...   .+..+....|+...+.+++.+.+...  .++|++|.
T Consensus        61 ~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~--~~~v~~SS  109 (286)
T 3gpi_A           61 HLRPEILVYCVAASE---YSDEHYRLSYVEGLRNTLSALEGAPL--QHVFFVSS  109 (286)
T ss_dssp             GGCCSEEEECHHHHH---HC-----CCSHHHHHHHHHHTTTSCC--CEEEEEEE
T ss_pred             cCCCCEEEEeCCCCC---CCHHHHHHHHHHHHHHHHHHHhhCCC--CEEEEEcc
Confidence            66 999999987532   22345567899999999999887542  35666654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=98.13  E-value=5.5e-06  Score=73.20  Aligned_cols=148  Identities=15%  Similarity=0.145  Sum_probs=81.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~al   79 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|+++|+++  +.++....++.... ....-+... ++   ..+++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~   81 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-------RVIIADLDE--AMATKAVEDLRMEG-HDVSSVVMDVTNTESVQNAV   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHH
Confidence            346899999999999999999998763       799999874  33333333332211 000001110 11   12222


Q ss_pred             -------CCCcEEEEeCCCCC-C-C--CCCH---HHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecCcccchHHHH
Q 020022           80 -------TGVNIAVMVGGFPR-K-E--GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        80 -------~~aDiVi~~ag~~~-~-~--~~~r---~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                             .+.|+||+.||... . +  ..+.   ...+..|+.....+.+.+.    +..  ...++++|.....     
T Consensus        82 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~-----  154 (260)
T 3awd_A           82 RSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK--QGVIVAIGSMSGL-----  154 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC--CCEEEEEecchhc-----
Confidence                   37899999999754 1 1  1232   3445667665555544443    332  3567777654321     


Q ss_pred             HHhCCCCCCC--cEEEechHHHHHHHHHHHHHc
Q 020022          142 KEFAPSIPAK--NITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       142 ~~~~~~~~~~--~i~~~t~lds~r~~~~la~~l  172 (332)
                          .+.|..  ..++.++.....+...+++.+
T Consensus       155 ----~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~  183 (260)
T 3awd_A          155 ----IVNRPQQQAAYNASKAGVHQYIRSLAAEW  183 (260)
T ss_dssp             ----SCCSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----ccCCCCCccccHHHHHHHHHHHHHHHHHh
Confidence                111222  234555555556666666664

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.12  E-value=1.2e-05  Score=70.23  Aligned_cols=151  Identities=13%  Similarity=0.041  Sum_probs=82.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--   80 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--   80 (332)
                      ++.++|.|+||+|++|++++..|+..|.       +|+++|+++  +.++....++..... ...++....+..++++  
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~   74 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGA-------KVVAVTRTN--SDLVSLAKECPGIEP-VCVDLGDWDATEKALGGI   74 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHSTTCEE-EECCTTCHHHHHHHHTTC
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhccCCCc-EEecCCCHHHHHHHHHHc
Confidence            3457999999999999999999998763       799999874  333221111100000 0000000011223333  


Q ss_pred             -CCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecCcccchHHHHHHhCCCCC
Q 020022           81 -GVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALILKEFAPSIP  149 (332)
Q Consensus        81 -~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~  149 (332)
                       ..|+||++||.....   ..+   ....+..|+.....+.+.+.    +.. ...+||++|.....         .+.+
T Consensus        75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~~iv~~sS~~~~---------~~~~  144 (244)
T 1cyd_A           75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG-VPGSIVNVSSMVAH---------VTFP  144 (244)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCGGGT---------SCCT
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC-CCeEEEEEcchhhc---------CCCC
Confidence             579999999975421   122   23455667766555444443    332 13567777754321         1223


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcC
Q 020022          150 AKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      ....++.++.....+-+.+++.++
T Consensus       145 ~~~~Y~~sK~a~~~~~~~~a~~~~  168 (244)
T 1cyd_A          145 NLITYSSTKGAMTMLTKAMAMELG  168 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhh
Confidence            222455556555667677777654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.12  E-value=3.6e-06  Score=77.95  Aligned_cols=100  Identities=15%  Similarity=0.170  Sum_probs=67.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh-----hHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-----VKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~-----~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      |||.|+||+|++|++++..|+..|-.  ....+|+++|+++....+..     ...|+.+           .....++++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~--~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d-----------~~~~~~~~~   68 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTP--GGPWKVYGVARRTRPAWHEDNPINYVQCDISD-----------PDDSQAKLS   68 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCT--TCSEEEEEEESSCCCSCCCSSCCEEEECCTTS-----------HHHHHHHHT
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCC--CCceEEEEEeCCCCccccccCceEEEEeecCC-----------HHHHHHHHh
Confidence            68999999999999999999876510  00027899998752111000     0011111           112446677


Q ss_pred             C---CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022           81 G---VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA  121 (332)
Q Consensus        81 ~---aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~  121 (332)
                      +   +|+||++|+...   .+..+....|+...+.+++.+.+.+
T Consensus        69 ~~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~  109 (364)
T 2v6g_A           69 PLTDVTHVFYVTWANR---STEQENCEANSKMFRNVLDAVIPNC  109 (364)
T ss_dssp             TCTTCCEEEECCCCCC---SSHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCCCCEEEECCCCCc---chHHHHHHHhHHHHHHHHHHHHHhc
Confidence            7   999999998763   3566788899999999999998873

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.12  E-value=7.4e-06  Score=72.77  Aligned_cols=149  Identities=13%  Similarity=0.114  Sum_probs=79.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT----   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~----   80 (332)
                      .++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++.........++....+..++++    
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~   82 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKAGA-------TVAIADLDV--MAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAID   82 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHH
Confidence            46899999999999999999998874       799999874  33332222221100000000000011222333    


Q ss_pred             ---CCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHH----HHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           81 ---GVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        81 ---~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~----i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                         +.|+||+.||.....   ..+   ....+..|+.....    ..+.+.+.. ..+.||++|.....         .+
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~---------~~  152 (263)
T 3ak4_A           83 ALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASN-TKGVIVNTASLAAK---------VG  152 (263)
T ss_dssp             HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCCEEEEECCGGGT---------SC
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEEecccccc---------cC
Confidence               799999999975421   122   23445666644444    444444332 13567777643221         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHc
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                      .|....++.++.....+-+.+++.+
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~la~e~  177 (263)
T 3ak4_A          153 APLLAHYSASKFAVFGWTQALAREM  177 (263)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHH
Confidence            2222234555555556666677665

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.12  E-value=4.6e-06  Score=73.95  Aligned_cols=160  Identities=21%  Similarity=0.232  Sum_probs=88.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh--
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA--   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a--   78 (332)
                      |+.+.++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........+++...+..++  
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGA-------KVVIVDRDK--AGAERVAGEIGDAALAVAADISKEADVDAAVE   75 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCTTEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHhCCceEEEEecCCCHHHHHHHHH
Confidence            445567999999999999999999998874       799999874  444333332211100000000000111222  


Q ss_pred             -----cCCCcEEEEeCCCCCCCC----CCHH---HHHHhhHH----HHHHHHHHHHhhcC--CCeEEEEecCcccchHHH
Q 020022           79 -----CTGVNIAVMVGGFPRKEG----MERK---DVMSKNVS----IYKAQASALEQHAA--PNCKVLVVANPANTNALI  140 (332)
Q Consensus        79 -----l~~aDiVi~~ag~~~~~~----~~r~---~~~~~n~~----i~~~i~~~i~~~~~--~~~~viv~tNP~~~~~~~  140 (332)
                           +...|++|+.||....++    .+.+   ..+..|+.    +++.+.+.+.+...  ..++|+++|.....    
T Consensus        76 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~----  151 (261)
T 3n74_A           76 AALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG----  151 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT----
T ss_pred             HHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc----
Confidence                 237899999999764222    1322   33455554    35555555555421  13567777654321    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                           .+.|..-.++.++..-..+-+.+++.+.  +..|+
T Consensus       152 -----~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  184 (261)
T 3n74_A          152 -----RPRPNLAWYNATKGWVVSVTKALAIELA--PAKIR  184 (261)
T ss_dssp             -----SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -----CCCCCccHHHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence                 1222222355555555667777777764  34565

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.11  E-value=1.1e-05  Score=70.91  Aligned_cols=156  Identities=8%  Similarity=0.043  Sum_probs=84.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++...  ....-+... ++   ..++ 
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~   73 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-------KVMITGRHS--DVGEKAAKSVGTP--DQIQFFQHDSSDEDGWTKLF   73 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhhcc--CceEEEECCCCCHHHHHHHH
Confidence            457899999999999999999998763       799999874  3333222222110  000001110 11   1122 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                            +...|+||+.||.....   ..+   ....+..|+.    ..+.+.+.+.+.. ...+||++|.....      
T Consensus        74 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~------  146 (251)
T 1zk4_A           74 DATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGF------  146 (251)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGT------
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhc------
Confidence                  23589999999975321   122   2345667776    4455555555443 11567777754321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+....++.++.....+.+.++..+...+..|+
T Consensus       147 ---~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~  181 (251)
T 1zk4_A          147 ---VGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR  181 (251)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred             ---cCCCCCccchHHHHHHHHHHHHHHHHhcccCCCeE
Confidence               12222223444444444555556665543345665

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.11  E-value=5.3e-06  Score=74.43  Aligned_cols=156  Identities=15%  Similarity=0.119  Sum_probs=87.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh-------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE-------   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~-------   77 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|.+.|+++  +.++....++.........+++...+..+       
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   98 (272)
T 4dyv_A           28 KKIAIVTGAGSGVGRAVAVALAGAGY-------GVALAGRRL--DALQETAAEIGDDALCVPTDVTDPDSVRALFTATVE   98 (272)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            35788999999999999999999874       799999874  44443333331100000001000011122       


Q ss_pred             hcCCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           78 ACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                      .+...|++|+.||.....    ..+.   +..+..|+..    ++.+.+.+.+...+.+.||++|.-...         .
T Consensus        99 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~---------~  169 (272)
T 4dyv_A           99 KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT---------S  169 (272)
T ss_dssp             HHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT---------S
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc---------C
Confidence            233799999999985321    1232   3455666655    555666666543224678887754331         1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.+....++.++.....+-+.++..++  +..|+
T Consensus       170 ~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  201 (272)
T 4dyv_A          170 PRPYSAPYTATKHAITGLTKSTSLDGR--VHDIA  201 (272)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhC--ccCEE
Confidence            223222455555555667777777764  34555

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=98.11  E-value=2.2e-05  Score=68.63  Aligned_cols=157  Identities=12%  Similarity=0.107  Sum_probs=80.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccceEee-CC---h
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---A   75 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~   75 (332)
                      |+++.++|.|+||+|++|.+++..|+..|.       ++++. ++++  +.++....++.... ....-+... ++   .
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~-------~V~~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~   70 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGA-------NIVLNGSPAS--TSLDATAEEFKAAG-INVVVAKGDVKNPEDV   70 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEECTTC--SHHHHHHHHHHHTT-CCEEEEESCTTSHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCcCH--HHHHHHHHHHHhcC-CcEEEEECCCCCHHHH
Confidence            766778999999999999999999998763       68888 4443  23332222232211 000000110 11   1


Q ss_pred             hhhc-------CCCcEEEEeCCCCCCC------CCCHHHHHHhhHHHHHHHH----HHHHhhcCCCeEEEEecCcccchH
Q 020022           76 VEAC-------TGVNIAVMVGGFPRKE------GMERKDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        76 ~~al-------~~aDiVi~~ag~~~~~------~~~r~~~~~~n~~i~~~i~----~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                      .+++       .+.|+||+.||.....      ..+....+..|+.....+.    +.+.+..  ..+||++|...... 
T Consensus        71 ~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~iv~~sS~~~~~-  147 (247)
T 2hq1_A           71 ENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK--SGKIINITSIAGII-  147 (247)
T ss_dssp             HHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT--CEEEEEECC------
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEEcChhhcc-
Confidence            2222       3789999999975321      1233456677776644444    4444433  35777777543210 


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                              +.|....++.++.....+.+.+++.++  +..++
T Consensus       148 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  179 (247)
T 2hq1_A          148 --------GNAGQANYAASKAGLIGFTKSIAKEFA--AKGIY  179 (247)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             --------CCCCCcHhHHHHHHHHHHHHHHHHHHH--HcCcE
Confidence                    112222344555555566666776664  23454

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.11  E-value=3.7e-06  Score=74.50  Aligned_cols=157  Identities=17%  Similarity=0.048  Sum_probs=82.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh-----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-----   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a-----   78 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       ++++.|+++  +.++....++.........+++...+..++     
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-------TVLGLDLKP--PAGEEPAAELGAAVRFRNADVTNEADATAALAFAK   76 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESSC--C------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            457899999999999999999999874       789999875  233222222211000000000000111222     


Q ss_pred             --cCCCcEEEEeCCCCCCC-------CCC---HHHHHHhhHHHHHHHHHHHHhhcC--------CCeEEEEecCcccchH
Q 020022           79 --CTGVNIAVMVGGFPRKE-------GME---RKDVMSKNVSIYKAQASALEQHAA--------PNCKVLVVANPANTNA  138 (332)
Q Consensus        79 --l~~aDiVi~~ag~~~~~-------~~~---r~~~~~~n~~i~~~i~~~i~~~~~--------~~~~viv~tNP~~~~~  138 (332)
                        +...|++|+.||.....       ..+   ....+..|+.-...+.+.+..+-.        +.+.||++|.....  
T Consensus        77 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~--  154 (257)
T 3tpc_A           77 QEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF--  154 (257)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH--
T ss_pred             HHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhc--
Confidence              23799999999976422       122   234456676555555444443311        24667777753321  


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                           .  +.+....++.++.--..+-+.+++.+.  +..|+
T Consensus       155 -----~--~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  187 (257)
T 3tpc_A          155 -----D--GQIGQAAYAASKGGVAALTLPAARELA--RFGIR  187 (257)
T ss_dssp             -----H--CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -----c--CCCCCcchHHHHHHHHHHHHHHHHHHH--HcCeE
Confidence                 1  223222445555555566666777654  33454

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=98.11  E-value=7e-06  Score=72.07  Aligned_cols=144  Identities=17%  Similarity=0.151  Sum_probs=80.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-e---C---Chhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-T---T---DAVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~---~---~~~~a   78 (332)
                      ++|.|+||+|++|.+++..|+..|.       +|+++|+++  +.++....++...   ...++.. .   +   +..++
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~   70 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGD-------RVAALDLSA--ETLEETARTHWHA---YADKVLRVRADVADEGDVNAA   70 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHSTT---TGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHH
Confidence            5799999999999999999998763       799999874  3333222222110   0011111 1   1   12223


Q ss_pred             c-------CCCcEEEEeCCCCCCCC------CC---HHHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           79 C-------TGVNIAVMVGGFPRKEG------ME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        79 l-------~~aDiVi~~ag~~~~~~------~~---r~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                      +       .+.|+||+.||......      .+   ....+..|+...    +.+.+.+.+..  ..++|++|.....  
T Consensus        71 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~--  146 (250)
T 2cfc_A           71 IAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG--AGVIVNIASVASL--  146 (250)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT--
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC--CCEEEEECChhhc--
Confidence            3       37899999999753211      12   233455666443    55555555543  3567777754321  


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHc
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                             .+.+....++.++.-...+.+.+++.+
T Consensus       147 -------~~~~~~~~Y~~sK~a~~~~~~~l~~e~  173 (250)
T 2cfc_A          147 -------VAFPGRSAYTTSKGAVLQLTKSVAVDY  173 (250)
T ss_dssp             -------SCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence                   122322234555555556666666665

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.10  E-value=5.4e-06  Score=73.44  Aligned_cols=160  Identities=14%  Similarity=0.079  Sum_probs=85.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      |+++.++|.|+||+|++|.+++..|+..|.       +|+++|+++  +.++....++.........++....+..++++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGA-------SAVLLDLPN--SGGEAQAKKLGNNCVFAPADVTSEKDVQTALA   78 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECTT--SSHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCc--HhHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence            444557899999999999999999998763       789999875  33332222221000000000000011223333


Q ss_pred             -------CCcEEEEeCCCCCCCC---------CC---HHHHHHhhHHHHHHHHHHHHhhcC--------CCeEEEEecCc
Q 020022           81 -------GVNIAVMVGGFPRKEG---------ME---RKDVMSKNVSIYKAQASALEQHAA--------PNCKVLVVANP  133 (332)
Q Consensus        81 -------~aDiVi~~ag~~~~~~---------~~---r~~~~~~n~~i~~~i~~~i~~~~~--------~~~~viv~tNP  133 (332)
                             ..|+||+.||......         .+   ....+..|+.....+.+.+..+..        +...||++|..
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~  158 (265)
T 2o23_A           79 LAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  158 (265)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             HHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh
Confidence                   7999999999753221         22   234556677655555555444311        23567777643


Q ss_pred             ccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          134 ANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ...       .  +.+....++.++.....+-+.+++.+.  +..|+
T Consensus       159 ~~~-------~--~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  194 (265)
T 2o23_A          159 AAF-------E--GQVGQAAYSASKGGIVGMTLPIARDLA--PIGIR  194 (265)
T ss_dssp             HHH-------H--CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             hhc-------C--CCCCCchhHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence            221       1  122222344455444556666666653  34555

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.10  E-value=1.2e-05  Score=70.26  Aligned_cols=155  Identities=14%  Similarity=0.100  Sum_probs=84.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc---C
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC---T   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al---~   80 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|+++|+++  +.++....++..... ...++....+..+++   .
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~   75 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-------RVVAVSRTQ--ADLDSLVRECPGIEP-VCVDLGDWEATERALGSVG   75 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHSTTCEE-EECCTTCHHHHHHHHTTCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHcCCCCE-EEEeCCCHHHHHHHHHHcC
Confidence            457899999999999999999998763       789999874  333222111110000 000000001122333   3


Q ss_pred             CCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHH----HHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022           81 GVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA  150 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~----~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~  150 (332)
                      ..|+||+.||.....   ..+   ....+..|+.....+.+    .+.+.. ....||++|.....         .+.+.
T Consensus        76 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~---------~~~~~  145 (244)
T 3d3w_A           76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG-VPGAIVNVSSQCSQ---------RAVTN  145 (244)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCGGGT---------SCCTT
T ss_pred             CCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCcEEEEeCchhhc---------cCCCC
Confidence            589999999975421   112   23456667666444444    443332 13567777754331         12232


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ...++.++.....+-+.+++.++  +..++
T Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~--~~~i~  173 (244)
T 3d3w_A          146 HSVYCSTKGALDMLTKVMALELG--PHKIR  173 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence            22456666666677777777654  23454

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=98.10  E-value=1.1e-05  Score=71.46  Aligned_cols=153  Identities=13%  Similarity=0.129  Sum_probs=88.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~al~   80 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|+++.    +....++......   ...++....+..++++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~~~----~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~   71 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-------NIVLNGFGDP----APALAEIARHGVKAVHHPADLSDVAQIEALFA   71 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEECSSCC----HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCch----HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            456899999999999999999998874       7899998752    1112222211000   0000000011223333


Q ss_pred             -------CCcEEEEeCCCCCCC---CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           81 -------GVNIAVMVGGFPRKE---GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        81 -------~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                             +.|++|+.||.....   ..+   ....+..|+.    ..+.+.+.+++..  ...||++|.....       
T Consensus        72 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~-------  142 (255)
T 2q2v_A           72 LAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN--WGRIINIASVHGL-------  142 (255)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEEECCGGGT-------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CcEEEEEcCchhc-------
Confidence                   799999999975421   122   2345667776    6677777776653  3577777754321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.|....++.++.....+-+.+++.+.  +..|+
T Consensus       143 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  175 (255)
T 2q2v_A          143 --VGSTGKAAYVAAKHGVVGLTKVVGLETA--TSNVT  175 (255)
T ss_dssp             --SCCTTBHHHHHHHHHHHHHHHHHHHHTT--TSSEE
T ss_pred             --cCCCCchhHHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence              1222222345555555667777777765  45665

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=98.09  E-value=2.2e-05  Score=70.41  Aligned_cols=158  Identities=14%  Similarity=0.126  Sum_probs=86.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-CCccceEeeCChhh---
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVE---   77 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~~~~~~~~~~~~~~---   77 (332)
                      ++.++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.... . ....++....+..+   
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~   97 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGA-------RVFICARDA--EACADTATRLSAYGDCQAIPADLSSEAGARRLAQ   97 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHH
Confidence            3457899999999999999999998773       799999874  33433333332110 0 00000000001111   


Q ss_pred             ----hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHH----HHHHHHHHhhcC--CCeEEEEecCcccchHHHH
Q 020022           78 ----ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIY----KAQASALEQHAA--PNCKVLVVANPANTNALIL  141 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~----~~i~~~i~~~~~--~~~~viv~tNP~~~~~~~~  141 (332)
                          .+...|++|+.||.....   ..+   .+..+..|+...    +.+.+.+++...  +...||++|.-...     
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~-----  172 (276)
T 2b4q_A           98 ALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGI-----  172 (276)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGT-----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHc-----
Confidence                233789999999975421   122   334566666544    555555555431  01567777753321     


Q ss_pred             HHhCCCCCCCc-EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~-i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.|... .++.++.....+-+.+++.+.  +..|+
T Consensus       173 ----~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~  206 (276)
T 2b4q_A          173 ----SAMGEQAYAYGPSKAALHQLSRMLAKELV--GEHIN  206 (276)
T ss_dssp             ----CCCCCSCTTHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ----CCCCCCccccHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence                1222222 345555555566677777664  34565

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.09  E-value=3e-05  Score=68.77  Aligned_cols=155  Identities=12%  Similarity=0.074  Sum_probs=84.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~al   79 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++.........-+... ++   ..+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   76 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-------HIVLVARQV--DRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVV   76 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            457899999999999999999998873       799999874  334333333322100000001110 11   12222


Q ss_pred             -------CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           80 -------TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        80 -------~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                             .+.|++|+.||.....   ..+.   ...+..|+..    ++.+.+.+.+..  ..+||++|.....      
T Consensus        77 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------  148 (263)
T 3ai3_A           77 ESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG--GGAIIHNASICAV------  148 (263)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CcEEEEECchhhc------
Confidence                   3789999999975421   1232   3345556544    444455554443  3567777754321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+....++.++.....+-+.++..+.  +..|+
T Consensus       149 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  181 (263)
T 3ai3_A          149 ---QPLWYEPIYNVTKAALMMFSKTLATEVI--KDNIR  181 (263)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence               1122222345555555566666776653  34454

>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}

Probab=98.09  E-value=1.3e-05  Score=75.17  Aligned_cols=109  Identities=11%  Similarity=0.197  Sum_probs=69.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh---hhhhhHHHHhhhh--------cCCccceEeeC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE---ALNGVKMELVDAA--------FPLLKGVVATT   73 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~---~l~~~~~dl~~~~--------~~~~~~~~~~~   73 (332)
                      ++||+||| +|.+|++++..|+..|...+....+|.++|+++..+   .++    .+....        .....++..++
T Consensus        21 ~~kI~iIG-aG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~i~~~~   95 (375)
T 1yj8_A           21 PLKISILG-SGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVD----IINNKHENTKYLKGVPLPHNIVAHS   95 (375)
T ss_dssp             CBCEEEEC-CSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHH----HHHHHCBCTTTSTTCBCCTTEEEES
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHH----HHHhcCcccccCCcccCcCCeEEEC
Confidence            46899999 699999999999887621100001699999875200   222    121110        01123567777


Q ss_pred             ChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHh----hcCCCeEEEEecCcc
Q 020022           74 DAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQ----HAAPNCKVLVVANPA  134 (332)
Q Consensus        74 ~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~----~~~~~~~viv~tNP~  134 (332)
                      +..+++++||+||++..                ...++++++.+..    +..++.+++..+|.+
T Consensus        96 ~~~ea~~~aDvVilav~----------------~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi  144 (375)
T 1yj8_A           96 DLASVINDADLLIFIVP----------------CQYLESVLASIKESESIKIASHAKAISLTKGF  144 (375)
T ss_dssp             STHHHHTTCSEEEECCC----------------HHHHHHHHHHHTC---CCCCTTCEEEECCCSC
T ss_pred             CHHHHHcCCCEEEEcCC----------------HHHHHHHHHHHhhhhhccCCCCCEEEEeCCcc
Confidence            77888999999999841                1245667777776    555677777777743

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.09  E-value=5.2e-06  Score=77.31  Aligned_cols=152  Identities=14%  Similarity=0.062  Sum_probs=82.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hc-CCccc-eEeeCChhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AF-PLLKG-VVATTDAVE   77 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~-~~~~~-~~~~~~~~~   77 (332)
                      |++.++||.|+||+|++|++++..|+..+.       +|+++++++.  ...  ..++... .. ....+ +.......+
T Consensus         1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~--~~~--~~~l~~~~~v~~v~~D~l~d~~~l~~   69 (352)
T 1xgk_A            1 MAQQKKTIAVVGATGRQGASLIRVAAAVGH-------HVRAQVHSLK--GLI--AEELQAIPNVTLFQGPLLNNVPLMDT   69 (352)
T ss_dssp             --CCCCCEEEESTTSHHHHHHHHHHHHTTC-------CEEEEESCSC--SHH--HHHHHTSTTEEEEESCCTTCHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEECCCC--hhh--HHHHhhcCCcEEEECCccCCHHHHHH
Confidence            766678999999999999999999988652       6888888752  211  1122210 00 00001 101112456


Q ss_pred             hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEe
Q 020022           78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPSIPAKNITCL  156 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  156 (332)
                      +++++|+||+.++...   .      ..|... +.+++.+++.. .  .++|++|....      ..+  +.++...++.
T Consensus        70 ~~~~~d~Vi~~a~~~~---~------~~~~~~-~~l~~aa~~~g~v--~~~V~~SS~~~------~~~--~~~~~~~y~~  129 (352)
T 1xgk_A           70 LFEGAHLAFINTTSQA---G------DEIAIG-KDLADAAKRAGTI--QHYIYSSMPDH------SLY--GPWPAVPMWA  129 (352)
T ss_dssp             HHTTCSEEEECCCSTT---S------CHHHHH-HHHHHHHHHHSCC--SEEEEEECCCG------GGT--SSCCCCTTTH
T ss_pred             HHhcCCEEEEcCCCCC---c------HHHHHH-HHHHHHHHHcCCc--cEEEEeCCccc------ccc--CCCCCccHHH
Confidence            7899999998876431   1      124444 77888877764 3  35666665431      011  1111112233


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      ++...    ..+.+..+++..-++.. ++|..
T Consensus       130 sK~~~----E~~~~~~gi~~~ivrpg-~~g~~  156 (352)
T 1xgk_A          130 PKFTV----ENYVRQLGLPSTFVYAG-IYNNN  156 (352)
T ss_dssp             HHHHH----HHHHHTSSSCEEEEEEC-EEGGG
T ss_pred             HHHHH----HHHHHHcCCCEEEEecc-eecCC
Confidence            33333    22334457777777744 46753

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=98.08  E-value=2.7e-05  Score=78.96  Aligned_cols=172  Identities=13%  Similarity=0.026  Sum_probs=98.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee----CChhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT----TDAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~----~~~~~al   79 (332)
                      +.++|.|+||+|++|++++..|+..|.       +|+++|+....  ......++.........-+...    ....+++
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~-------~V~~~~r~~~~--~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~   80 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGY-------DCVVADNLSNS--TYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVF   80 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSC--CTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCCcc--hHHHHHHHhhccCCceEEEEcCCCCHHHHHHHH
Confidence            457999999999999999999998763       78899876421  1111111211110101111111    1233455


Q ss_pred             C--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH--------HHHhCCC
Q 020022           80 T--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI--------LKEFAPS  147 (332)
Q Consensus        80 ~--~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~--------~~~~~~~  147 (332)
                      +  ++|+||++||.....  .....+.+..|+.....+++.+++...  .++|++|.. .+....        +.+. .-
T Consensus        81 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--~~iV~~SS~-~vyg~~~~~~~~~~~~E~-~~  156 (699)
T 1z45_A           81 KEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNV--SKFVFSSSA-TVYGDATRFPNMIPIPEE-CP  156 (699)
T ss_dssp             HHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEG-GGGCCGGGSTTCCSBCTT-SC
T ss_pred             HhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEECcH-HHhCCCccccccCCcccc-CC
Confidence            5  899999999865311  112346778899999999999887652  356666532 110000        0000 00


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHH--cCCCCCCeeeeEEEecc
Q 020022          148 IPAKNITCLTRLDHNRALGQISEK--LNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~--l~v~~~~v~~~~v~G~h  188 (332)
                      ..+...++.++....++...+++.  .+++..-++...|+|.+
T Consensus       157 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~  199 (699)
T 1z45_A          157 LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAH  199 (699)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCC
Confidence            111224566677766776666666  56666666766667754

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=98.08  E-value=1.8e-05  Score=70.38  Aligned_cols=94  Identities=14%  Similarity=0.155  Sum_probs=62.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      +|||+||| +|.+|+.++..|...|. .     .+.++|+++  ++++.    +....     .+..+++..++++++|+
T Consensus        10 ~m~i~iiG-~G~mG~~~a~~l~~~g~-~-----~v~~~~~~~--~~~~~----~~~~~-----g~~~~~~~~~~~~~~Dv   71 (266)
T 3d1l_A           10 DTPIVLIG-AGNLATNLAKALYRKGF-R-----IVQVYSRTE--ESARE----LAQKV-----EAEYTTDLAEVNPYAKL   71 (266)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHHTC-C-----EEEEECSSH--HHHHH----HHHHT-----TCEEESCGGGSCSCCSE
T ss_pred             CCeEEEEc-CCHHHHHHHHHHHHCCC-e-----EEEEEeCCH--HHHHH----HHHHc-----CCceeCCHHHHhcCCCE
Confidence            47999999 69999999999988763 1     388999874  33322    22110     12345667788899999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ||++...              +  ..+++++.+....+++.+++..++
T Consensus        72 vi~av~~--------------~--~~~~v~~~l~~~~~~~~ivv~~s~  103 (266)
T 3d1l_A           72 YIVSLKD--------------S--AFAELLQGIVEGKREEALMVHTAG  103 (266)
T ss_dssp             EEECCCH--------------H--HHHHHHHHHHTTCCTTCEEEECCT
T ss_pred             EEEecCH--------------H--HHHHHHHHHHhhcCCCcEEEECCC
Confidence            9998420              0  124566666666656776766766

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=98.08  E-value=5.2e-06  Score=74.97  Aligned_cols=109  Identities=14%  Similarity=0.038  Sum_probs=66.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al~~aD   83 (332)
                      +++|.|+||+|++|++++..|+..+-      .+|+++++++.  ...  ...+...... ...++.-.....++++++|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~------~~V~~~~R~~~--~~~--~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d   74 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGT------FKVRVVTRNPR--KKA--AKELRLQGAEVVQGDQDDQVIMELALNGAY   74 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCS------SEEEEEESCTT--SHH--HHHHHHTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCC------ceEEEEEcCCC--CHH--HHHHHHCCCEEEEecCCCHHHHHHHHhcCC
Confidence            46899999999999999999988651      17889988752  211  1122211100 0001111123457889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      +||+++|.....      ....|+...+.+++.+++...  .++++.|
T Consensus        75 ~vi~~a~~~~~~------~~~~~~~~~~~~~~aa~~~gv--~~iv~~S  114 (299)
T 2wm3_A           75 ATFIVTNYWESC------SQEQEVKQGKLLADLARRLGL--HYVVYSG  114 (299)
T ss_dssp             EEEECCCHHHHT------CHHHHHHHHHHHHHHHHHHTC--SEEEECC
T ss_pred             EEEEeCCCCccc------cchHHHHHHHHHHHHHHHcCC--CEEEEEc
Confidence            999998743111      124567778888888887653  2455544

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.08  E-value=2.2e-05  Score=69.16  Aligned_cols=108  Identities=16%  Similarity=0.126  Sum_probs=69.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhhcCCccceEeeCChhhhc----C
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFPLLKGVVATTDAVEAC----T   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~~~~~~~~~~~~~~~~al----~   80 (332)
                      ++|.|+||+|++|.+++..|+..|.       +|++.|+++.  .++ ....|+.+..           +..+++    .
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~~~--~~~~~~~~Dl~~~~-----------~v~~~~~~~~~   61 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-------QIVGIDIRDA--EVIADLSTAEGRKQ-----------AIADVLAKCSK   61 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSSS--SEECCTTSHHHHHH-----------HHHHHHTTCTT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCch--hhccccccCCCCHH-----------HHHHHHHHhCC
Confidence            4799999999999999999998763       7899998752  221 1334555432           112222    4


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcc
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPA  134 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~  134 (332)
                      ..|++|+.||..... ...+..+..|+.....+.+.+..+.  .+..+||++|...
T Consensus        62 ~id~lv~~Ag~~~~~-~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           62 GMDGLVLCAGLGPQT-KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             CCSEEEECCCCCTTC-SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CCCEEEECCCCCCCc-ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence            569999999986412 2356677777766555555443321  1235777777543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.07  E-value=8.7e-06  Score=72.19  Aligned_cols=151  Identities=11%  Similarity=0.115  Sum_probs=88.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC-------hhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD-------AVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~-------~~~   77 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........++....+       ..+
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGA-------EVLLTGRNE--SNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999874       799999874  34433222221110000000000000       112


Q ss_pred             hcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCC
Q 020022           78 ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAK  151 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~  151 (332)
                      .+...|++|+.||......   .+   .+..+..|+.-...+.+.+..+-.+.+.||++|.....         .+.|..
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~---------~~~~~~  149 (255)
T 4eso_A           79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADE---------GGHPGM  149 (255)
T ss_dssp             HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGS---------SBCTTB
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhc---------CCCCCc
Confidence            3347899999999864221   23   33457788877777777776653234677787754331         122322


Q ss_pred             cEEEechHHHHHHHHHHHHHcC
Q 020022          152 NITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~  173 (332)
                      ..++.++.--..+-+.++..+.
T Consensus       150 ~~Y~asKaa~~~~~~~la~e~~  171 (255)
T 4eso_A          150 SVYSASKAALVSFASVLAAELL  171 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHh
Confidence            2455555555667777777764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=98.07  E-value=2e-05  Score=69.90  Aligned_cols=150  Identities=17%  Similarity=0.117  Sum_probs=79.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE   77 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~   77 (332)
                      +++.++|.|+||+|++|.+++..|+..|.       +|+++|+++  +.++....++..... ...-+... ++   ..+
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~   80 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGA-------VIHTCARNE--YELNECLSKWQKKGF-QVTGSVCDASLRPEREK   80 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHH
Confidence            33457899999999999999999998763       789999874  334333333322110 00001110 11   122


Q ss_pred             hc--------CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcccchHH
Q 020022           78 AC--------TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        78 al--------~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~~~~~~  139 (332)
                      ++        ...|+||+.||.....   ..+   ....+..|+.....+.+.+    ++..  ..+||++|.....   
T Consensus        81 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--~~~iv~isS~~~~---  155 (266)
T 1xq1_A           81 LMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG--CGNIIFMSSIAGV---  155 (266)
T ss_dssp             HHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SCEEEEEC--------
T ss_pred             HHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEEccchhc---
Confidence            22        5789999999975321   122   2345667776555555544    4443  3567777754321   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHc
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                            .+.+....++.++.....+-+.+++.+
T Consensus       156 ------~~~~~~~~Y~~sK~a~~~~~~~la~e~  182 (266)
T 1xq1_A          156 ------VSASVGSIYSATKGALNQLARNLACEW  182 (266)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence                  011222234455555556666677665

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.07  E-value=1e-05  Score=72.39  Aligned_cols=155  Identities=14%  Similarity=0.155  Sum_probs=86.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh-----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-----   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a-----   78 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........+++...+..++     
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-------RVVLADLPE--TDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTI   80 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECTT--SCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHH
Confidence            346899999999999999999999874       799999885  344333332211000000011000111222     


Q ss_pred             --cCCCcEEEEeCCCCCC-C----CCC---HHHHHHhhHHHHHHHHH----HHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           79 --CTGVNIAVMVGGFPRK-E----GME---RKDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        79 --l~~aDiVi~~ag~~~~-~----~~~---r~~~~~~n~~i~~~i~~----~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                        +...|++|+.||.... .    ..+   .+..+..|+.....+.+    .+.+..  .+.||++|.....        
T Consensus        81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~g~iv~isS~~~~--------  150 (271)
T 3tzq_B           81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG--GGAIVNISSATAH--------  150 (271)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEEEECCGGGT--------
T ss_pred             HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCEEEEECCHHHc--------
Confidence              3378999999997632 1    123   23456677755544444    445543  4677777754321        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.+....++.++.-...+-+.++..+.  +..|+
T Consensus       151 -~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~  183 (271)
T 3tzq_B          151 -AAYDMSTAYACTKAAIETLTRYVATQYG--RHGVR  183 (271)
T ss_dssp             -SBCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -CCCCCChHHHHHHHHHHHHHHHHHHHHh--hcCEE
Confidence             1222222345555555667777777754  33454

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.07  E-value=7.8e-05  Score=66.19  Aligned_cols=151  Identities=16%  Similarity=0.178  Sum_probs=85.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      ..+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........-+... ++   ..++ 
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-------NVAVAGRST--ADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALA   79 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHH
Confidence            457899999999999999999998874       799999874  444444444433210000011111 11   1122 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                            +...|++|+.||.....   ..+.+   ..+..|+.-.    +.+.+.+.+..  .+.||++|.-...      
T Consensus        80 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--~g~iv~isS~~~~------  151 (262)
T 3pk0_A           80 GRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG--SGRVVLTSSITGP------  151 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS--SCEEEEECCSBTT------
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEEechhhc------
Confidence                  23789999999975422   22333   3456666444    44455555444  3567777653321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                       . .+.|....++.++.-...+-+.++..+.
T Consensus       152 -~-~~~~~~~~Y~asK~a~~~l~~~la~e~~  180 (262)
T 3pk0_A          152 -I-TGYPGWSHYGATKAAQLGFMRTAAIELA  180 (262)
T ss_dssp             -T-BCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -c-CCCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence             0 1223222455555555667777777754

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=98.07  E-value=5.7e-06  Score=73.62  Aligned_cols=156  Identities=14%  Similarity=0.079  Sum_probs=88.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAV   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~   76 (332)
                      |..+.++|.|+||+|++|++++..|+..|.       ++++.++.. .+.++....++...... ..-+... +   +..
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~l~~~~~~-~~~~~~D~~~~~~~~   87 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGA-------SVVVNYGSS-SKAAEEVVAELKKLGAQ-GVAIQADISKPSEVV   87 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHTTCC-EEEEECCTTSHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCc-hHHHHHHHHHHHhcCCc-EEEEEecCCCHHHHH
Confidence            334457899999999999999999998763       788888732 23333333333321100 0001110 1   122


Q ss_pred             hhcC-------CCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           77 EACT-------GVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        77 ~al~-------~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                      ++++       +.|+||+.||.....   ..+   ....+..|+.....+.+.+.++..++.+||++|.....       
T Consensus        88 ~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~-------  160 (274)
T 1ja9_A           88 ALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAV-------  160 (274)
T ss_dssp             HHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGT-------
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhc-------
Confidence            2333       789999999976421   122   23456778877777777766653223567777653321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                       ..+.+....++.++.....+.+.+++.++
T Consensus       161 -~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~  189 (274)
T 1ja9_A          161 -MTGIPNHALYAGSKAAVEGFCRAFAVDCG  189 (274)
T ss_dssp             -CCSCCSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -cCCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence             01222222455555555666667777664

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=98.06  E-value=8.4e-06  Score=72.74  Aligned_cols=151  Identities=16%  Similarity=0.075  Sum_probs=81.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hc-CCccceEeeCChhhhc--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AF-PLLKGVVATTDAVEAC--   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~-~~~~~~~~~~~~~~al--   79 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|++.  +.++....++... .. ....++....+..+++  
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   85 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-------KVVIADIAD--DHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDT   85 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCCh--hHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999998763       789999874  2232222222110 00 0000000001122222  


Q ss_pred             -----CCCcEEEEeCCCCCCC-----CCC---HHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHHHHh
Q 020022           80 -----TGVNIAVMVGGFPRKE-----GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        80 -----~~aDiVi~~ag~~~~~-----~~~---r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                           .+.|+||+.||.....     ..+   ..+.+..|+.....+.+.+..+.  .+..+||++|.....        
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~--------  157 (278)
T 2bgk_A           86 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF--------  157 (278)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGT--------
T ss_pred             HHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeecccc--------
Confidence                 3789999999975321     122   23456667765555555544431  023577777754321        


Q ss_pred             CCCCC-CCcEEEechHHHHHHHHHHHHHc
Q 020022          145 APSIP-AKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       145 ~~~~~-~~~i~~~t~lds~r~~~~la~~l  172 (332)
                       .+.+ ....++.++.....+.+.+++.+
T Consensus       158 -~~~~~~~~~Y~~sK~a~~~~~~~la~e~  185 (278)
T 2bgk_A          158 -TAGEGVSHVYTATKHAVLGLTTSLCTEL  185 (278)
T ss_dssp             -CCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence             1112 11234555555556666666665

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=98.06  E-value=4.1e-06  Score=84.54  Aligned_cols=166  Identities=14%  Similarity=0.109  Sum_probs=99.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC----hhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD----AVE   77 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~----~~~   77 (332)
                      ++++|.|+||+|++|++++..|+.. +.       +|+++|+++.  .+..    +...  ....-+... ++    ..+
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~-------~V~~~~r~~~--~~~~----~~~~--~~v~~v~~Dl~d~~~~~~~  378 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHY-------EVYGLDIGSD--AISR----FLNH--PHFHFVEGDISIHSEWIEY  378 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSE-------EEEEEESCCT--TTGG----GTTC--TTEEEEECCTTTCHHHHHH
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCC-------EEEEEEcCch--hhhh----hccC--CceEEEECCCCCcHHHHHH
Confidence            4579999999999999999999886 43       7899998742  2211    1000  000000110 11    234


Q ss_pred             hcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCC----C
Q 020022           78 ACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAP----S  147 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~----~  147 (332)
                      +++++|+||++||.....  ..+..+.+..|+...+.+++.+.+..   .++|++|... +...    .+.+..+    .
T Consensus       379 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~r~V~~SS~~-vyg~~~~~~~~E~~~~~~~~  454 (660)
T 1z7e_A          379 HVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSE-VYGMCSDKYFDEDHSNLIVG  454 (660)
T ss_dssp             HHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGG-GGBTCCSSSBCTTTCCEEEC
T ss_pred             hhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC---CEEEEEecHH-HcCCCCCcccCCCccccccC
Confidence            667899999999875321  12345677889999999999988764   3566766421 1000    0000000    0


Q ss_pred             --CCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          148 --IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       148 --~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                        .++...++.+.....++...+++..|++..-++...|+|..
T Consensus       455 p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~  497 (660)
T 1z7e_A          455 PVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPR  497 (660)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTT
T ss_pred             cccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCC
Confidence              01112456677777777777777778888788877677854

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.06  E-value=5e-06  Score=73.41  Aligned_cols=154  Identities=17%  Similarity=0.165  Sum_probs=86.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh-------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE-------   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~-------   77 (332)
                      .+++.|+||+|.+|.+++..|+..|.       ++++.|+++  +.++....++.........+++...+..+       
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAERGA-------KVIGTATSE--SGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999874       799999874  34433333332211000001100011122       


Q ss_pred             hcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           78 ACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      .+...|++|+.||......   .+.   +..+..|+.-    .+.+.+.+.+..  .+.||++|.-..       ..  +
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~--~g~iv~isS~~~-------~~--~  148 (248)
T 3op4_A           80 EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR--QGRIINVGSVVG-------TM--G  148 (248)
T ss_dssp             HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCHHH-------HH--C
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CCEEEEEcchhh-------cC--C
Confidence            2337899999999864321   232   3445666654    444455555443  367777775322       11  2


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .|....++.++.--..+-+.++..++  +..|+
T Consensus       149 ~~~~~~Y~asK~a~~~l~~~la~e~~--~~gi~  179 (248)
T 3op4_A          149 NAGQANYAAAKAGVIGFTKSMAREVA--SRGVT  179 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHH--HhCeE
Confidence            23223455555555667777777764  34555

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=98.05  E-value=2.1e-05  Score=71.47  Aligned_cols=103  Identities=15%  Similarity=0.205  Sum_probs=62.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-C----ccceEeeC--Chhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-L----LKGVVATT--DAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~----~~~~~~~~--~~~~   77 (332)
                      +|||+||| +|.+|+.++..|...|.       ++.++|+++  ++++.....  ..... .    ..++..++  +..+
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~   70 (316)
T 2ew2_A            3 AMKIAIAG-AGAMGSRLGIMLHQGGN-------DVTLIDQWP--AHIEAIRKN--GLIADFNGEEVVANLPIFSPEEIDH   70 (316)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHHH--CEEEEETTEEEEECCCEECGGGCCT
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhCCC-------cEEEEECCH--HHHHHHHhC--CEEEEeCCCeeEecceeecchhhcc
Confidence            46999999 69999999999988763       799999874  333221110  00000 0    01122222  1223


Q ss_pred             hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      +++++|+||++...                ...+++.+.+..+..++..|+.++|..+
T Consensus        71 ~~~~~d~vi~~v~~----------------~~~~~v~~~l~~~l~~~~~iv~~~~g~~  112 (316)
T 2ew2_A           71 QNEQVDLIIALTKA----------------QQLDAMFKAIQPMITEKTYVLCLLNGLG  112 (316)
T ss_dssp             TSCCCSEEEECSCH----------------HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred             cCCCCCEEEEEecc----------------ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence            44599999998521                1235666677776656777777788765

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.05  E-value=1.7e-05  Score=69.42  Aligned_cols=156  Identities=15%  Similarity=0.120  Sum_probs=84.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------h
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------E   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~-------~   77 (332)
                      ++++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........+++...+..       +
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   73 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-------QVSMMGRRY--QRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVE   73 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence            45899999999999999999998874       799999974  4444333333211000000000000111       2


Q ss_pred             hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022           78 ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPSIPA  150 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~~~~~~~~~~~  150 (332)
                      .+...|++|+.||.....   ..+   .+..+..|+.....+.+.+...- .....||++|.....         .+.+.
T Consensus        74 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~---------~~~~~  144 (235)
T 3l6e_A           74 WGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQ---------VGKAN  144 (235)
T ss_dssp             HHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECC---------SSCSS
T ss_pred             hcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhc---------CCCCC
Confidence            233679999999985321   223   33456677766644444443321 112467777654331         11121


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .-.++.++.-...+-+.+++.++  +..|+
T Consensus       145 ~~~Y~asKaa~~~~~~~la~e~~--~~gi~  172 (235)
T 3l6e_A          145 ESLYCASKWGMRGFLESLRAELK--DSPLR  172 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT--TSSEE
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhh--ccCCE
Confidence            12344455555567777777765  44565

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=98.05  E-value=2.4e-05  Score=71.73  Aligned_cols=96  Identities=18%  Similarity=0.220  Sum_probs=60.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh-hcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE-ACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~-al~~a   82 (332)
                      +.+||+||| .|.||..++..|...|...     +|.++|+++  +.++. ..++  ..     .....++..+ ++++|
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~-----~V~~~dr~~--~~~~~-a~~~--G~-----~~~~~~~~~~~~~~~a   95 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKG-----KIYGYDINP--ESISK-AVDL--GI-----IDEGTTSIAKVEDFSP   95 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCS-----EEEEECSCH--HHHHH-HHHT--TS-----CSEEESCTTGGGGGCC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCC-----EEEEEECCH--HHHHH-HHHC--CC-----cchhcCCHHHHhhccC
Confidence            447999999 7999999999999877422     799999974  33321 1111  10     0023456677 89999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      |+||++....                .+.++.+.+..+.+++++|+.++
T Consensus        96 DvVilavp~~----------------~~~~vl~~l~~~l~~~~iv~d~~  128 (314)
T 3ggo_A           96 DFVMLSSPVR----------------TFREIAKKLSYILSEDATVTDQG  128 (314)
T ss_dssp             SEEEECSCGG----------------GHHHHHHHHHHHSCTTCEEEECC
T ss_pred             CEEEEeCCHH----------------HHHHHHHHHhhccCCCcEEEECC
Confidence            9999985211                12344455555555676555443

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=98.05  E-value=1.4e-05  Score=72.71  Aligned_cols=67  Identities=21%  Similarity=0.209  Sum_probs=48.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +++||+||| +|.+|..++..|+..|.       +|.++|+++  ++++    .+.....     ....++..+++++||
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~-------~V~~~dr~~--~~~~----~~~~~g~-----~~~~~~~~e~~~~aD   66 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGL-------STWGADLNP--QACA----NLLAEGA-----CGAAASAREFAGVVD   66 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHH----HHHHTTC-----SEEESSSTTTTTTCS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEECCH--HHHH----HHHHcCC-----ccccCCHHHHHhcCC
Confidence            457999999 79999999999998763       799999974  3332    1222111     112456788899999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +||++.
T Consensus        67 vvi~~v   72 (303)
T 3g0o_A           67 ALVILV   72 (303)
T ss_dssp             EEEECC
T ss_pred             EEEEEC
Confidence            999985

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.05  E-value=1e-05  Score=71.43  Aligned_cols=150  Identities=17%  Similarity=0.132  Sum_probs=82.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhh--hhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL--NGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l--~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      |+++.++|.|+||+|.+|.+++..|+..|.       +|++.|+++..+..  .....|+.+....  ..  ......+.
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~D~~d~~~~--~~--~~~~~~~~   71 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGA-------KVTGFDQAFTQEQYPFATEVMDVADAAQV--AQ--VCQRLLAE   71 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCCCSSCCSSEEEECCTTCHHHH--HH--HHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCchhhhcCCceEEEcCCCCHHHH--HH--HHHHHHHH
Confidence            555667999999999999999999998873       78999987421100  0011122211100  00  00011122


Q ss_pred             cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCC
Q 020022           79 CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      +.+.|++|+.||.....   ..+   .+..+..|+...    +.+.+.+++..  ...||++|.....         .+.
T Consensus        72 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--~g~iv~isS~~~~---------~~~  140 (250)
T 2fwm_X           72 TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR--GGAIVTVASDAAH---------TPR  140 (250)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECCGGGT---------SCC
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC--CCEEEEECchhhC---------CCC
Confidence            34789999999975421   123   234456666544    44444445543  3567777753321         122


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHc
Q 020022          149 PAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                      |....++.++.....+-+.++..+
T Consensus       141 ~~~~~Y~~sK~a~~~~~~~la~e~  164 (250)
T 2fwm_X          141 IGMSAYGASKAALKSLALSVGLEL  164 (250)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHh
Confidence            222234555555556666777765

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.05  E-value=9.2e-06  Score=72.58  Aligned_cols=155  Identities=15%  Similarity=0.255  Sum_probs=83.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~-------   76 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       .|.+.|+++  +.++....++.........+++...+..       
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-------IVGLHGTRE--DKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHH
Confidence            347899999999999999999999874       789999874  3443322222110000000000000111       


Q ss_pred             hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           77 EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                      +.+...|++|+.||.....   ..+   ....+..|+..    .+.+.+.+.+..  .+.||++|.-....         
T Consensus        97 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~Iv~isS~~~~~---------  165 (266)
T 3grp_A           97 REMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR--YGRIINITSIVGVV---------  165 (266)
T ss_dssp             HHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCC-------------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CcEEEEECCHHHcC---------
Confidence            2234789999999976422   122   33455667765    666666666654  36777777543211         


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.+....++.++.-...+-+.+++.++  +..|+
T Consensus       166 ~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gI~  197 (266)
T 3grp_A          166 GNPGQTNYCAAKAGLIGFSKALAQEIA--SRNIT  197 (266)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhh--hhCcE
Confidence            112112344444444566667777664  33555

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=98.05  E-value=2e-05  Score=71.45  Aligned_cols=153  Identities=16%  Similarity=0.103  Sum_probs=89.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCCh------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA------   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~------   75 (332)
                      .+++.|+||+|.+|.+++..|+..|.       ++++.|++...+.++.....+......   ...++....+.      
T Consensus        49 ~k~vlVTGas~GIG~aia~~la~~G~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           49 DRKALVTGGDSGIGRAAAIAYAREGA-------DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence            46899999999999999999999874       789998863222332222222221100   00011000011      


Q ss_pred             -hhhcCCCcEEEEeCCCCCCC----CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           76 -VEACTGVNIAVMVGGFPRKE----GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        76 -~~al~~aDiVi~~ag~~~~~----~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                       .+.+...|++|+.||.....    ..+   .+..+..|+.-...+.+.+...-.+.+.||++|.-...         .+
T Consensus       122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~---------~~  192 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAY---------QP  192 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGT---------SC
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhc---------cC
Confidence             12234789999999975321    123   34567788888888888777665445678787754321         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .+....++.++.-...+-+.++..+.
T Consensus       193 ~~~~~~Y~asKaa~~~l~~~la~e~~  218 (294)
T 3r3s_A          193 SPHLLDYAATKAAILNYSRGLAKQVA  218 (294)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHh
Confidence            23222355555555667777777763

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.04  E-value=1.9e-05  Score=67.67  Aligned_cols=101  Identities=17%  Similarity=0.110  Sum_probs=62.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+|+||+|.+|+.++..|+..+.       ++.++|+++  ++++....++... .. ..++.. ++..++++++|+|
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~~~~~D~V   68 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGH-------EIVVGSRRE--EKAEAKAAEYRRI-AG-DASITG-MKNEDAAEACDIA   68 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESSH--HHHHHHHHHHHHH-HS-SCCEEE-EEHHHHHHHCSEE
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhccc-cc-cCCCCh-hhHHHHHhcCCEE
Confidence            4899999779999999999987653       799999874  3333221111110 00 012332 4566788999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      |++....         .       .+++.+.+.... ++.+++..+|+.+
T Consensus        69 i~~~~~~---------~-------~~~~~~~l~~~~-~~~~vi~~~~g~~  101 (212)
T 1jay_A           69 VLTIPWE---------H-------AIDTARDLKNIL-REKIVVSPLVPVS  101 (212)
T ss_dssp             EECSCHH---------H-------HHHHHHHTHHHH-TTSEEEECCCCEE
T ss_pred             EEeCChh---------h-------HHHHHHHHHHHc-CCCEEEEcCCCcC
Confidence            9985311         1       223333444433 3567888888765

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=98.04  E-value=8.8e-06  Score=71.34  Aligned_cols=154  Identities=14%  Similarity=0.042  Sum_probs=85.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh----hHHHHhhhhcCCccceEeeCChhhhc-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG----VKMELVDAAFPLLKGVVATTDAVEAC-   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~----~~~dl~~~~~~~~~~~~~~~~~~~al-   79 (332)
                      .++|.|+||+|.+|.+++..|+..|.       +|++.|+++.  .+.+    ...|+.+....  ..  ......+.+ 
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~D~~~~~~v--~~--~~~~~~~~~~   73 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARNW-------WVASIDVVEN--EEASASVIVKMTDSFTEQA--DQ--VTAEVGKLLG   73 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESSCC--TTSSEEEECCCCSCHHHHH--HH--HHHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-------EEEEEeCChh--hccCCcEEEEcCCCCHHHH--HH--HHHHHHHHhC
Confidence            46899999999999999999998763       7999998752  2221    11122111100  00  000111222 


Q ss_pred             -CCCcEEEEeCCCCCCC----CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCC
Q 020022           80 -TGVNIAVMVGGFPRKE----GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAK  151 (332)
Q Consensus        80 -~~aDiVi~~ag~~~~~----~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~  151 (332)
                       .+.|++|+.||.....    ..+   ....+..|+.....+.+.+..+-.+.++||++|.-...         .+.+..
T Consensus        74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~---------~~~~~~  144 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL---------DGTPGM  144 (241)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG---------SCCTTB
T ss_pred             CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHc---------cCCCCc
Confidence             4789999999975321    112   23456678776666666665543223577777753321         122322


Q ss_pred             cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          152 NITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..++.++.....+-+.+++.++..+..|+
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~~~gi~  173 (241)
T 1dhr_A          145 IGYGMAKGAVHQLCQSLAGKNSGMPSGAA  173 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTSSCCTTCE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCCCeE
Confidence            23444444445566666666543355665

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.03  E-value=5.9e-06  Score=72.59  Aligned_cols=157  Identities=15%  Similarity=0.239  Sum_probs=89.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~   76 (332)
                      |+.+.+++.|+||+|++|++++..|+..|.       ++.+.|+++  +.++....++.+.... ..-+... ++   ..
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~   70 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGA-------TVVGTATSQ--ASAEKFENSMKEKGFK-ARGLVLNISDIESIQ   70 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHHHTTCC-EEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-eEEEEecCCCHHHHH
Confidence            767778999999999999999999998874       799999874  3444333333322110 0001110 11   11


Q ss_pred             h-------hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           77 E-------ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        77 ~-------al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                      +       .....|++|+.||.....   ..+.   ...+..|+...    +.+.+.+.+..  .+.||++|.....   
T Consensus        71 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~isS~~~~---  145 (247)
T 3lyl_A           71 NFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR--WGRIISIGSVVGS---  145 (247)
T ss_dssp             HHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCTHHH---
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CeEEEEEcchhhc---
Confidence            1       123579999999986432   1222   34456666544    44444454443  3677777754321   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .  +.|....++.++.-...+-+.+++.+.  +..|+
T Consensus       146 ----~--~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  178 (247)
T 3lyl_A          146 ----A--GNPGQTNYCAAKAGVIGFSKSLAYEVA--SRNIT  178 (247)
T ss_dssp             ----H--CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ----c--CCCCcHHHHHHHHHHHHHHHHHHHHHH--HcCeE
Confidence                1  223223455555555567777777764  34555

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.03  E-value=2.6e-05  Score=69.16  Aligned_cols=154  Identities=17%  Similarity=0.176  Sum_probs=86.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~al   79 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++...... ..-+... ++   ..+++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~   77 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-------SVYTCSRNQ--KELNDCLTQWRSKGFK-VEASVCDLSSRSERQELM   77 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCE-EEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-EEEEEcCCCCHHHHHHHH
Confidence            347899999999999999999998873       799999874  3343333333221100 0000110 11   11222


Q ss_pred             --------CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHH----HHhhcCCCeEEEEecCcccchHHHH
Q 020022           80 --------TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        80 --------~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~----i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                              ...|++|+.||.....   ..+   ....+..|+.....+.+.    +.+..  ...||++|.....     
T Consensus        78 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~-----  150 (260)
T 2ae2_A           78 NTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE--RGNVVFISSVSGA-----  150 (260)
T ss_dssp             HHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS--SEEEEEECCGGGT-----
T ss_pred             HHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEEcchhhc-----
Confidence                    5799999999975421   122   234556676554444444    44432  3677777754321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.|....++.++.....+-+.+++.+.  +..|+
T Consensus       151 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  183 (260)
T 2ae2_A          151 ----LAVPYEAVYGATKGAMDQLTRCLAFEWA--KDNIR  183 (260)
T ss_dssp             ----SCCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEE
T ss_pred             ----cCCCCcchHHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence                1223222455556555677777777764  34565

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=98.03  E-value=1.9e-05  Score=71.75  Aligned_cols=92  Identities=15%  Similarity=0.219  Sum_probs=61.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| .|.+|..++..|+..|.       +|.++|+++  ++++.    +.+.      .+..+++..++++ ||+
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~-------~V~~~dr~~--~~~~~----~~~~------g~~~~~~~~~~~~-aDv   73 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPG-------GVTVYDIRI--EAMTP----LAEA------GATLADSVADVAA-ADL   73 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTT-------CEEEECSST--TTSHH----HHHT------TCEECSSHHHHTT-SSE
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHH----HHHC------CCEEcCCHHHHHh-CCE
Confidence            46899999 79999999999988763       699999985  33321    2221      2345567888888 999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ||++...+               ..++++.+.+.....++.+|+..|+
T Consensus        74 vi~~vp~~---------------~~~~~v~~~l~~~l~~g~ivv~~st  106 (296)
T 3qha_A           74 IHITVLDD---------------AQVREVVGELAGHAKPGTVIAIHST  106 (296)
T ss_dssp             EEECCSSH---------------HHHHHHHHHHHTTCCTTCEEEECSC
T ss_pred             EEEECCCh---------------HHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            99985311               1233444566655556666665554

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.03  E-value=2.3e-05  Score=70.37  Aligned_cols=154  Identities=16%  Similarity=0.115  Sum_probs=88.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC------hh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD------AV   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~------~~   76 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++...... ..++.. ..|      ..
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~~~~Dv~~~~~v~   79 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-------SVMIVGRNP--DKLAGAVQELEALGAN-GGAIRYEPTDITNEDETA   79 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHTTCCS-SCEEEEEECCTTSHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCC-CceEEEEeCCCCCHHHHH
Confidence            357899999999999999999998874       799999874  4444444444332110 001111 111      11


Q ss_pred             hhc-------CCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcccchH
Q 020022           77 EAC-------TGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        77 ~al-------~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                      +++       ...|++|+.||.....    ..+.   ...+..|+.....+    .+.+.+.  +.+.||++|....   
T Consensus        80 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~~g~iv~isS~~~---  154 (281)
T 3svt_A           80 RAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG--GGGSFVGISSIAA---  154 (281)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCEEEEEECCHHH---
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEEeCHHH---
Confidence            222       3679999999973222    1232   34556677544444    4444443  2467888775322   


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .  .+.+....++.++.-...+-+.++..++  +..|+
T Consensus       155 ----~--~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~gi~  188 (281)
T 3svt_A          155 ----S--NTHRWFGAYGVTKSAVDHLMQLAADELG--ASWVR  188 (281)
T ss_dssp             ----H--SCCTTCTHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ----c--CCCCCChhHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence                1  1223223456666666677777887775  34565

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.03  E-value=3.7e-05  Score=68.77  Aligned_cols=153  Identities=16%  Similarity=0.167  Sum_probs=88.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~al   79 (332)
                      ..+++.|+||+|.+|.+++..|+..|.       .+++.|.+. .+.++....++..... ...-+... ++   ..+++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~~~~-~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~  100 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-------AVALTYVNA-AERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAI  100 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHH
Confidence            346899999999999999999999874       688887654 2334433333432111 00001111 11   12222


Q ss_pred             -------CCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           80 -------TGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        80 -------~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                             ...|++|+.||......   .+   .+..+..|+.....+.+.+...-.+.+.||+++.....       . .
T Consensus       101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~-------~-~  172 (271)
T 3v2g_A          101 RETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAE-------L-V  172 (271)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGT-------C-C
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhc-------c-C
Confidence                   37899999999864221   23   33456778776666666666553334677777654321       0 1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      ..|....++.++.-...+-+.+++.++
T Consensus       173 ~~~~~~~Y~asKaa~~~l~~~la~e~~  199 (271)
T 3v2g_A          173 PWPGISLYSASKAALAGLTKGLARDLG  199 (271)
T ss_dssp             CSTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence            123222455555555667777777764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.03  E-value=1.1e-05  Score=70.94  Aligned_cols=155  Identities=13%  Similarity=0.167  Sum_probs=83.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh---hhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV---EACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~---~al~   80 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|.+.|+++  +.++....++.........++.......   +.+.
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   83 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGS-------KVIISGSNE--EKLKSLGNALKDNYTIEVCNLANKEECSNLISKTS   83 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcC
Confidence            347899999999999999999998873       799999874  4443332222211000000000000111   2234


Q ss_pred             CCcEEEEeCCCCCCC------CCCHHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022           81 GVNIAVMVGGFPRKE------GMERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA  150 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~------~~~r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~  150 (332)
                      +.|++|+.||.....      ..+....+..|+..    .+.+.+.+.+..  .++||++|.....         .+.|.
T Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~isS~~~~---------~~~~~  152 (249)
T 3f9i_A           84 NLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR--YGRIINISSIVGI---------AGNPG  152 (249)
T ss_dssp             CCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCCCC-----------CCSC
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CcEEEEEccHHhc---------cCCCC
Confidence            789999999975421      12345566666654    444444444443  3678787754331         12232


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ...++.++.....+-+.+++.+.  +..|+
T Consensus       153 ~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  180 (249)
T 3f9i_A          153 QANYCASKAGLIGMTKSLSYEVA--TRGIT  180 (249)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CchhHHHHHHHHHHHHHHHHHHH--HcCcE
Confidence            22455555555566667777664  34555

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.02  E-value=1.6e-05  Score=70.36  Aligned_cols=155  Identities=15%  Similarity=0.095  Sum_probs=85.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC----   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al----   79 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........++....+..+++    
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   74 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-------RVVLADVLD--EEGAATARELGDAARYQHLDVTIEEDWQRVVAYAR   74 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHH
Confidence            456899999999999999999998874       799999874  3333222222100000000000001112222    


Q ss_pred             ---CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           80 ---TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        80 ---~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                         .+.|++|+.||.....   ..+   ....+..|+..    ++.+.+.+++..  ...||++|.....         .
T Consensus        75 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~---------~  143 (254)
T 1hdc_A           75 EEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG--GGSIVNISSAAGL---------M  143 (254)
T ss_dssp             HHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT---------S
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CCEEEEECchhhc---------c
Confidence               3799999999975421   122   23445666543    356666666653  3577777754321         1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.|....++.++.....+-+.++..++  +..|+
T Consensus       144 ~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  175 (254)
T 1hdc_A          144 GLALTSSYGASKWGVRGLSKLAAVELG--TDRIR  175 (254)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence            222222344455555566666776654  34554

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=98.02  E-value=5.3e-05  Score=67.44  Aligned_cols=156  Identities=17%  Similarity=0.220  Sum_probs=88.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe----eCChh---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA----TTDAV---   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~----~~~~~---   76 (332)
                      ..++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........-+..    ..+..   
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~   89 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-------RLVLSGRDV--SELDAARRALGEQFGTDVHTVAIDLAEPDAPAELA   89 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            346899999999999999999999874       799999874  44443334443211110000111    11111   


Q ss_pred             ----hhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           77 ----EACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        77 ----~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                          +.+...|++|+.||......   .+.   +..+..|+..    .+.+.+.+.+.. +.+.||++|.-...      
T Consensus        90 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~g~iv~isS~~~~------  162 (266)
T 4egf_A           90 RRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAG-EGGAIITVASAAAL------  162 (266)
T ss_dssp             HHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCGGGT------
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEEcchhhc------
Confidence                22347899999999864221   232   3345666544    455555555544 24677777754321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+....++.++.--..+-+.++..+.  +..|+
T Consensus       163 ---~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~gI~  195 (266)
T 4egf_A          163 ---APLPDHYAYCTSKAGLVMATKVLARELG--PHGIR  195 (266)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---cCCCCChHHHHHHHHHHHHHHHHHHHHh--hhCeE
Confidence               1223222455555555667777777764  34555

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=98.02  E-value=3.4e-05  Score=69.53  Aligned_cols=97  Identities=21%  Similarity=0.271  Sum_probs=63.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      |+.++|||+|||++|.+|+.++..|...|.       +|.++|+++  +.++.    +....      +.. ++..++++
T Consensus         7 ~~~mmm~I~iIG~tG~mG~~la~~l~~~g~-------~V~~~~r~~--~~~~~----~~~~g------~~~-~~~~~~~~   66 (286)
T 3c24_A            7 NDVGPKTVAILGAGGKMGARITRKIHDSAH-------HLAAIEIAP--EGRDR----LQGMG------IPL-TDGDGWID   66 (286)
T ss_dssp             CSCCCCEEEEETTTSHHHHHHHHHHHHSSS-------EEEEECCSH--HHHHH----HHHTT------CCC-CCSSGGGG
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHH----HHhcC------CCc-CCHHHHhc
Confidence            333357999999339999999999988763       799999874  33321    22111      111 24567889


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      +||+||++...                ..++++.+.+..+..++.+|+..|+.
T Consensus        67 ~aDvVi~av~~----------------~~~~~v~~~l~~~l~~~~ivv~~s~~  103 (286)
T 3c24_A           67 EADVVVLALPD----------------NIIEKVAEDIVPRVRPGTIVLILDAA  103 (286)
T ss_dssp             TCSEEEECSCH----------------HHHHHHHHHHGGGSCTTCEEEESCSH
T ss_pred             CCCEEEEcCCc----------------hHHHHHHHHHHHhCCCCCEEEECCCC
Confidence            99999998421                11456667777665567666656664

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=98.02  E-value=1.4e-05  Score=72.02  Aligned_cols=64  Identities=16%  Similarity=0.239  Sum_probs=48.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.+|..++..|+..|.       +|+++|+++  ++++    .+.+.      .+...++..+++++||+|
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~-------~V~~~dr~~--~~~~----~~~~~------g~~~~~~~~~~~~~aDvv   61 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGC-------SVTIWNRSP--EKAE----ELAAL------GAERAATPCEVVESCPVT   61 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSG--GGGH----HHHHT------TCEECSSHHHHHHHCSEE
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHC------CCeecCCHHHHHhcCCEE
Confidence            6999999 79999999999998763       799999984  3332    12221      234556788889999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        62 i~~v   65 (287)
T 3pef_A           62 FAML   65 (287)
T ss_dssp             EECC
T ss_pred             EEEc
Confidence            9984

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.02  E-value=1.3e-05  Score=69.42  Aligned_cols=140  Identities=10%  Similarity=0.091  Sum_probs=87.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      +.+.+++.|+||+|.+|.+++..|+..|.       .+++.|+++.        .|+.+....        ....+.+..
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~~~--------~D~~~~~~v--------~~~~~~~g~   59 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHT-------IVHVASRQTG--------LDISDEKSV--------YHYFETIGA   59 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTE-------EEEEESGGGT--------CCTTCHHHH--------HHHHHHHCS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEecCCcc--------cCCCCHHHH--------HHHHHHhCC
Confidence            34557899999999999999999988764       7899987631        344332210        012233467


Q ss_pred             CcEEEEeCCCCCCC----CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEE
Q 020022           82 VNIAVMVGGFPRKE----GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT  154 (332)
Q Consensus        82 aDiVi~~ag~~~~~----~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~  154 (332)
                      .|++|+.||.....    ..+   ....+..|+.....+.+.+..+-.+.+.|+++|.....         .+.+..-.+
T Consensus        60 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~---------~~~~~~~~Y  130 (223)
T 3uce_A           60 FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR---------KVVANTYVK  130 (223)
T ss_dssp             EEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT---------SCCTTCHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc---------cCCCCchHH
Confidence            89999999975221    223   23456778887777777776664334677777753321         122322245


Q ss_pred             EechHHHHHHHHHHHHHcC
Q 020022          155 CLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       155 ~~t~lds~r~~~~la~~l~  173 (332)
                      +.++.-...+-+.+++.++
T Consensus       131 ~asK~a~~~~~~~la~e~~  149 (223)
T 3uce_A          131 AAINAAIEATTKVLAKELA  149 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhhc
Confidence            5555555677777888776

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=98.01  E-value=2.8e-05  Score=67.97  Aligned_cols=155  Identities=16%  Similarity=0.140  Sum_probs=84.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~~al   79 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|+++|+++  +.++....++.........-+... +   +..+++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   76 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-------TVIITGTSG--ERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAF   76 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHH
Confidence            457899999999999999999998763       799999874  333322223322100000001110 1   122233


Q ss_pred             -------CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           80 -------TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        80 -------~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                             .+.|+||+.||.....   ..+   ....+..|+...    +.+.+.+.+..  ..+||++|....       
T Consensus        77 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~iv~~sS~~~-------  147 (248)
T 2pnf_A           77 EEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR--WGRIVNISSVVG-------  147 (248)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT--CEEEEEECCHHH-------
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CcEEEEEccHHh-------
Confidence                   3799999999976422   122   234566777666    44444554443  356777774221       


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..  +.+....++.++.....+.+.+++.+.  +..++
T Consensus       148 ~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~  181 (248)
T 2pnf_A          148 FT--GNVGQVNYSTTKAGLIGFTKSLAKELA--PRNVL  181 (248)
T ss_dssp             HH--CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             cC--CCCCCchHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence            11  122222344455544566666666654  23455

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.01  E-value=5.1e-06  Score=73.50  Aligned_cols=148  Identities=14%  Similarity=0.082  Sum_probs=79.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh-----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-----   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a-----   78 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........++....+..++     
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-------KVAFSDINE--AAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQ   75 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            446899999999999999999998863       799999874  333322222210000000000000011122     


Q ss_pred             --cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           79 --CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        79 --l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                        +...|++|+.||.....   ..+.   ...+..|+.    ..+.+.+.+++.  + ..||++|.....         .
T Consensus        76 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~-g~iv~isS~~~~---------~  143 (253)
T 1hxh_A           76 RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--G-GSIINMASVSSW---------L  143 (253)
T ss_dssp             HHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--C-EEEEEECCGGGT---------S
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc--C-CEEEEEcchhhc---------C
Confidence              23569999999975321   1232   344566754    455555665543  2 577777754321         1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHc
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                      +.+....++.++.....+-+.++..+
T Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~  169 (253)
T 1hxh_A          144 PIEQYAGYSASKAAVSALTRAAALSC  169 (253)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHh
Confidence            12222234444444455555566554

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.01  E-value=7.9e-06  Score=72.46  Aligned_cols=120  Identities=18%  Similarity=0.098  Sum_probs=74.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a   78 (332)
                      +.++|.|+||+|++|++++..|+. .|.       +|++++++.  +.++....++...... ..-+... ++   ..++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~~~~~   72 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-------DVVLTARDV--TRGQAAVQQLQAEGLS-PRFHQLDIDDLQSIRAL   72 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-------EEEEEESSH--HHHHHHHHHHHHTTCC-CEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-------eEEEEeCCh--HHHHHHHHHHHhcCCe-eEEEECCCCCHHHHHHH
Confidence            456899999999999999999998 663       789999874  3343333333321100 0001110 11   1222


Q ss_pred             cC-------CCcEEEEeCCCCCCCC--C----CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           79 CT-------GVNIAVMVGGFPRKEG--M----ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        79 l~-------~aDiVi~~ag~~~~~~--~----~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      ++       +.|+||+.||......  .    +....+..|+.....+.+.+.++..+.++||++|..
T Consensus        73 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~  140 (276)
T 1wma_A           73 RDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  140 (276)
T ss_dssp             HHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             HHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECCh
Confidence            32       7899999999764321  1    123457888888888888887764333577777753

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=98.01  E-value=3.3e-06  Score=74.96  Aligned_cols=103  Identities=16%  Similarity=0.248  Sum_probs=68.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC--Cc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG--VN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~--aD   83 (332)
                      |||.|+||+|++|++++..|+. +.       +|+++++++..+  .+...|+.+.           .+..+++++  +|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~-------~V~~~~r~~~~~--~~~~~Dl~~~-----------~~~~~~~~~~~~d   59 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RH-------EVIKVYNSSEIQ--GGYKLDLTDF-----------PRLEDFIIKKRPD   59 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TS-------CEEEEESSSCCT--TCEECCTTSH-----------HHHHHHHHHHCCS
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CC-------eEEEecCCCcCC--CCceeccCCH-----------HHHHHHHHhcCCC
Confidence            4799999999999999999984 42       688888874211  1111122111           123445554  99


Q ss_pred             EEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        84 iVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +||++||.....  ..+..+.+..|+.....+++.+.+..   +++|++|.
T Consensus        60 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~iv~~SS  107 (273)
T 2ggs_A           60 VIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID---SYIVHIST  107 (273)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred             EEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC---CeEEEEec
Confidence            999999875321  12455677889999999999988753   36666664

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=98.01  E-value=2.2e-05  Score=70.91  Aligned_cols=152  Identities=7%  Similarity=0.008  Sum_probs=82.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~al   79 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++.........-+... ++   ..+++
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~   95 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-------QCVIASRKM--DVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTV   95 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHH
Confidence            347899999999999999999998763       799999874  334333333322100000001110 11   12222


Q ss_pred             -------CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhc---CCCeEEEEecCcccchHHHHHH
Q 020022           80 -------TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        80 -------~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~---~~~~~viv~tNP~~~~~~~~~~  143 (332)
                             ...|+||+.||.....   ..+   ....+..|+.....+.+.+..+.   .+...+|++|.-..       .
T Consensus        96 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~-------~  168 (302)
T 1w6u_A           96 SELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA-------E  168 (302)
T ss_dssp             HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHH-------H
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccc-------c
Confidence                   3459999999975321   122   23456667765555544443321   13366777765321       1


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .  +.+....++.++.....+-+.+++.+.
T Consensus       169 ~--~~~~~~~Y~~sK~a~~~~~~~la~~~~  196 (302)
T 1w6u_A          169 T--GSGFVVPSASAKAGVEAMSKSLAAEWG  196 (302)
T ss_dssp             H--CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             c--CCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence            1  123222445555555566666776653

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.01  E-value=0.00011  Score=65.09  Aligned_cols=156  Identities=12%  Similarity=0.080  Sum_probs=89.6

Q ss_pred             CCcEEEEEcCCCc--hHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceE--ee--CChh
Q 020022            4 EPVRVLVTGAAGQ--IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVV--AT--TDAV   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~--vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~--~~--~~~~   76 (332)
                      +.+++.|+||+|+  +|.+++..|+..|.       +|.+.|+++  ...+ ...++...... ...-+.  ++  .+..
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~   75 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-------RLIFTYAGE--RLEK-SVHELAGTLDRNDSIILPCDVTNDAEIE   75 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-------EEEEEESSG--GGHH-HHHHHHHTSSSCCCEEEECCCSSSHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-------EEEEecCch--HHHH-HHHHHHHhcCCCCceEEeCCCCCHHHHH
Confidence            4578999999988  99999999999874       788998874  2111 22222211100 000011  11  1111


Q ss_pred             hh-------cCCCcEEEEeCCCCCC-----C--CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           77 EA-------CTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        77 ~a-------l~~aDiVi~~ag~~~~-----~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                      ++       +...|++|+.||....     +  ..+.   ...+..|+.....+.+.+..+..+.+.||++|.....   
T Consensus        76 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~---  152 (266)
T 3oig_A           76 TCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGE---  152 (266)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT---
T ss_pred             HHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccc---
Confidence            22       2367999999997641     1  1232   3455677777777777776665445678887754331   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                            .+.|....++.++.-...+-+.+++.+.  +..|+
T Consensus       153 ------~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  185 (266)
T 3oig_A          153 ------LVMPNYNVMGVAKASLDASVKYLAADLG--KENIR  185 (266)
T ss_dssp             ------SCCTTTHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ------ccCCCcchhHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence                  1223223455555555667777777764  34555

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=98.01  E-value=6.5e-06  Score=73.70  Aligned_cols=104  Identities=14%  Similarity=0.139  Sum_probs=66.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc--ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhcCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG--VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al~~a   82 (332)
                      |||.|+||+|++|++++..|+..  +.       +|+.+++++  +.+.    ++...... ...++.-.....++++++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~~--~~~~----~l~~~~~~~~~~D~~d~~~l~~~~~~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPAS-------QIIAIVRNV--EKAS----TLADQGVEVRHGDYNQPESLQKAFAGV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGG-------GEEEEESCT--TTTH----HHHHTTCEEEECCTTCHHHHHHHTTTC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCC-------eEEEEEcCH--HHHh----HHhhcCCeEEEeccCCHHHHHHHHhcC
Confidence            47999999999999999999876  53       688888874  2222    11111000 000111112345778999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |+||++++...    ..    ..|+...+.+++.+.+...  .++|++|.
T Consensus        68 d~vi~~a~~~~----~~----~~n~~~~~~l~~a~~~~~~--~~~v~~Ss  107 (287)
T 2jl1_A           68 SKLLFISGPHY----DN----TLLIVQHANVVKAARDAGV--KHIAYTGY  107 (287)
T ss_dssp             SEEEECCCCCS----CH----HHHHHHHHHHHHHHHHTTC--SEEEEEEE
T ss_pred             CEEEEcCCCCc----Cc----hHHHHHHHHHHHHHHHcCC--CEEEEECC
Confidence            99999998531    11    3588888899998887653  25666653

>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}

Probab=98.00  E-value=1.9e-05  Score=74.35  Aligned_cols=110  Identities=18%  Similarity=0.248  Sum_probs=72.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccC-CCCCceEEEEEeCCCchhhhhhhHHHHh--hhh------cCCccceEeeCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVML-GTDQPVILHMLDIPPAAEALNGVKMELV--DAA------FPLLKGVVATTD   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~-~~~~~~ei~L~D~~~~~~~l~~~~~dl~--~~~------~~~~~~~~~~~~   74 (332)
                      +|.||+|+| +|.-|+++|..|+..+-- ......+|.|+.++++. ..+.....+.  |..      ..+..++..++|
T Consensus        33 ~p~KI~ViG-aGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~-~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~d  110 (391)
T 4fgw_A           33 KPFKVTVIG-SGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEI-NGEKLTEIINTRHQNVKYLPGITLPDNLVANPD  110 (391)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBS-SSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESC
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHh-hhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCC
Confidence            467999999 699999999999876420 00001168898876421 1111111222  221      123468899999


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           75 AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      +.+++++||+||++.  |              .+.++++++++..+-+++..+|.++
T Consensus       111 l~~al~~ad~ii~av--P--------------s~~~r~~l~~l~~~~~~~~~iv~~~  151 (391)
T 4fgw_A          111 LIDSVKDVDIIVFNI--P--------------HQFLPRICSQLKGHVDSHVRAISCL  151 (391)
T ss_dssp             HHHHHTTCSEEEECS--C--------------GGGHHHHHHHHTTTSCTTCEEEECC
T ss_pred             HHHHHhcCCEEEEEC--C--------------hhhhHHHHHHhccccCCCceeEEec
Confidence            999999999999983  2              2346678888887776676666665

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.00  E-value=1.9e-05  Score=69.53  Aligned_cols=156  Identities=15%  Similarity=0.145  Sum_probs=87.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh-----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-----   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a-----   78 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|.+.|+++  +.++....++.........++....+..++     
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   75 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-------TVIVSDINA--EGAKAAAASIGKKARAIAADISDPGSVKALFAEIQ   75 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999874       799999874  344333222211000000111111111222     


Q ss_pred             --cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           79 --CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        79 --l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                        +...|++|+.||.....   ..+.   ...+..|+..    .+.+.+.+++.. +.++||++|.....       .  
T Consensus        76 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~-------~--  145 (247)
T 3rwb_A           76 ALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAG-KAGRVISIASNTFF-------A--  145 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCTHHH-------H--
T ss_pred             HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCcEEEEECchhhc-------c--
Confidence              23789999999975422   1232   3445666654    444455576654 34677777753221       1  


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.|....++.++.--..+-+.++..++  +..|+
T Consensus       146 ~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  177 (247)
T 3rwb_A          146 GTPNMAAYVAAKGGVIGFTRALATELG--KYNIT  177 (247)
T ss_dssp             TCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence            223222345555555566777777764  34565

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.00  E-value=4.6e-05  Score=67.38  Aligned_cols=153  Identities=16%  Similarity=0.130  Sum_probs=84.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh------
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV------   76 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~------   76 (332)
                      ++.++|.|+||+|++|.+++..|+..|.       +|++.|+++.  . +....++.. . ....++....+..      
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~--~-~~~~~~~~~-~-~~~~D~~~~~~~~~~~~~~   71 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGA-------LVALCDLRPE--G-KEVAEAIGG-A-FFQVDLEDERERVRFVEEA   71 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSTT--H-HHHHHHHTC-E-EEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCChh--H-HHHHHHhhC-C-EEEeeCCCHHHHHHHHHHH
Confidence            3457899999999999999999998873       7999998752  2 211222210 0 0000000000111      


Q ss_pred             -hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHH----HHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           77 -EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        77 -~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~----i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                       +.+...|++|+.||.....   ..+   ....+..|+.....+.+.    +++..  ...||++|.-...         
T Consensus        72 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--~g~iv~isS~~~~---------  140 (256)
T 2d1y_A           72 AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG--GGAIVNVASVQGL---------  140 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT--CEEEEEECCGGGT---------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEcccccc---------
Confidence             2234789999999975421   122   234566777655555444    43332  3677777754321         


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .+.|....++.++.....+-+.++..++  +..|+
T Consensus       141 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  173 (256)
T 2d1y_A          141 FAEQENAAYNASKGGLVNLTRSLALDLA--PLRIR  173 (256)
T ss_dssp             SBCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence            1122222345555555566667777664  34565

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.00  E-value=2.1e-05  Score=70.47  Aligned_cols=157  Identities=14%  Similarity=0.142  Sum_probs=87.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh-
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE-   77 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~-   77 (332)
                      ++.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++...... ..-+... ++   ..+ 
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~Dv~~~~~v~~~   89 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGL-------RVFVCARGE--EGLRTTLKELREAGVE-ADGRTCDVRSVPEIEAL   89 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCC-EEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-eEEEECCCCCHHHHHHH
Confidence            3456899999999999999999998874       799999874  3343333333221100 0000110 11   112 


Q ss_pred             ------hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhh--c--CCCeEEEEecCcccchHHHH
Q 020022           78 ------ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQH--A--APNCKVLVVANPANTNALIL  141 (332)
Q Consensus        78 ------al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~--~--~~~~~viv~tNP~~~~~~~~  141 (332)
                            .+.+.|++|+.||.....   ..+   ....+..|+.....+.+.+...  .  .+.+.||++|.....     
T Consensus        90 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~-----  164 (277)
T 2rhc_B           90 VAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK-----  164 (277)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGT-----
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccc-----
Confidence                  233789999999975422   122   2345677777666666654433  0  023577777754321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.+....++.++.....+-+.++..+.  +..|+
T Consensus       165 ----~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  197 (277)
T 2rhc_B          165 ----QGVVHAAPYSASKHGVVGFTKALGLELA--RTGIT  197 (277)
T ss_dssp             ----SCCTTCHHHHHHHHHHHHHHHHHHHHHT--TTEEE
T ss_pred             ----cCCCCCccHHHHHHHHHHHHHHHHHHHH--HhCcE
Confidence                1222222344455555566677777664  34565

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.00  E-value=2.6e-05  Score=67.71  Aligned_cols=155  Identities=12%  Similarity=0.104  Sum_probs=84.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC---
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV---   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a---   82 (332)
                      ++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........++....+..++++.+   
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   72 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK-------ATYLTGRSE--SKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSI   72 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC-------CEEEEESCH--HHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhc
Confidence            4699999999999999999998874       689999874  3443222222100000000110011122223222   


Q ss_pred             -cEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhhcCC-CeEEEEecCcccchHHHHHHhCCCCCCCcEE
Q 020022           83 -NIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAAP-NCKVLVVANPANTNALILKEFAPSIPAKNIT  154 (332)
Q Consensus        83 -DiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~~~~-~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~  154 (332)
                       |++|+.||......   .+   ....+..|+.....+.+.+.....+ ...+|++|.....         .+.+....+
T Consensus        73 ~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~---------~~~~~~~~Y  143 (230)
T 3guy_A           73 PSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQ---------QPKAQESTY  143 (230)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGT---------SCCTTCHHH
T ss_pred             CCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccC---------CCCCCCchh
Confidence             99999999754221   23   2345566776555555554443211 2356677654321         122322345


Q ss_pred             EechHHHHHHHHHHHHHcCCCCCCee
Q 020022          155 CLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       155 ~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.++.-...+-+.+++.++  +..|+
T Consensus       144 ~asKaa~~~~~~~la~e~~--~~gi~  167 (230)
T 3guy_A          144 CAVKWAVKGLIESVRLELK--GKPMK  167 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHTT--TSSCE
T ss_pred             HHHHHHHHHHHHHHHHHHH--hcCeE
Confidence            6666666677888888876  34554

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.99  E-value=6.9e-05  Score=66.51  Aligned_cols=154  Identities=18%  Similarity=0.155  Sum_probs=89.3

Q ss_pred             CcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh
Q 020022            5 PVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA   78 (332)
Q Consensus         5 ~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a   78 (332)
                      .++|.|+||+  |++|.+++..|+..|.       +|++.|+++   .++....++.... ....-+... ++   ..++
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-------~V~~~~r~~---~~~~~~~~l~~~~-~~~~~~~~D~~~~~~v~~~   77 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGA-------ELAFTYQND---KLKGRVEEFAAQL-GSDIVLQCDVAEDASIDTM   77 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTC-------EEEEEESST---TTHHHHHHHHHHT-TCCCEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEEcCcH---HHHHHHHHHHHhc-CCcEEEEccCCCHHHHHHH
Confidence            4689999998  9999999999998873       789999874   1222222232210 000001111 11   1122


Q ss_pred             c-------CCCcEEEEeCCCCCC-----C--C-CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           79 C-------TGVNIAVMVGGFPRK-----E--G-ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        79 l-------~~aDiVi~~ag~~~~-----~--~-~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                      +       ...|++|+.||....     +  . .+   ....+..|+.....+.+.+..+..+.++||++|.....    
T Consensus        78 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~----  153 (265)
T 1qsg_A           78 FAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE----  153 (265)
T ss_dssp             HHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhc----
Confidence            2       267999999997642     1  1 22   23466788888888888777653223577777753221    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                           .+.|....++.++.....+-+.+++.+.  +..|+
T Consensus       154 -----~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  186 (265)
T 1qsg_A          154 -----RAIPNYNVMGLAKASLEANVRYMANAMG--PEGVR  186 (265)
T ss_dssp             -----SBCTTTTHHHHHHHHHHHHHHHHHHHHT--TTTEE
T ss_pred             -----cCCCCchHHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence                 1122222455555555667777777764  34565

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.99  E-value=0.00022  Score=62.82  Aligned_cols=148  Identities=14%  Similarity=0.117  Sum_probs=85.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee---CC---hh---
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT---TD---AV---   76 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~---~~---~~---   76 (332)
                      +++.|+||+|.+|.+++..|+..|.       .|++.|+++  +.++....++.........-+...   ++   ..   
T Consensus        13 k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (252)
T 3f1l_A           13 RIILVTGASDGIGREAAMTYARYGA-------TVILLGRNE--EKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLA   83 (252)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHH
Confidence            6899999999999999999998874       799999874  444434444432211000001110   11   11   


Q ss_pred             ----hhcCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           77 ----EACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        77 ----~al~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                          +.+...|++|+.||....  +  ..+.   +..+..|+...    +.+.+.+++..  .+.||++|.....     
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--~g~iv~isS~~~~-----  156 (252)
T 3f1l_A           84 QRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD--AGSLVFTSSSVGR-----  156 (252)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS--SCEEEEECCGGGT-----
T ss_pred             HHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC--CCEEEEECChhhc-----
Confidence                222378999999997422  1  2333   34456666544    44444445443  3567777754331     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                          .+.+....++.++.-...+-+.+++.++
T Consensus       157 ----~~~~~~~~Y~asK~a~~~l~~~la~e~~  184 (252)
T 3f1l_A          157 ----QGRANWGAYAASKFATEGMMQVLADEYQ  184 (252)
T ss_dssp             ----SCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ----cCCCCCchhHHHHHHHHHHHHHHHHHhc
Confidence                1223222455555555677778888876

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.98  E-value=2.9e-05  Score=71.27  Aligned_cols=65  Identities=17%  Similarity=0.282  Sum_probs=49.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      +|||+||| .|.+|..++..|+..|.       +|.++|+++  ++++    .+...      .+...++..+++++||+
T Consensus        31 ~~~I~iIG-~G~mG~~~a~~l~~~G~-------~V~~~dr~~--~~~~----~l~~~------g~~~~~~~~e~~~~aDv   90 (320)
T 4dll_A           31 ARKITFLG-TGSMGLPMARRLCEAGY-------ALQVWNRTP--ARAA----SLAAL------GATIHEQARAAARDADI   90 (320)
T ss_dssp             CSEEEEEC-CTTTHHHHHHHHHHTTC-------EEEEECSCH--HHHH----HHHTT------TCEEESSHHHHHTTCSE
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHhCCC-------eEEEEcCCH--HHHH----HHHHC------CCEeeCCHHHHHhcCCE
Confidence            47999999 79999999999998763       799999984  3332    22221      23456778899999999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||++.
T Consensus        91 Vi~~v   95 (320)
T 4dll_A           91 VVSML   95 (320)
T ss_dssp             EEECC
T ss_pred             EEEEC
Confidence            99985

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=97.98  E-value=2.2e-05  Score=72.08  Aligned_cols=114  Identities=14%  Similarity=0.197  Sum_probs=65.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--ccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--LKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--~~~~~~~~~~~~al~~a   82 (332)
                      +|||+|+| +|.+|+.++..|...|.       +|.++|+++ .+.++..-..+.......  ...+..+++..++.+++
T Consensus         2 ~mkI~IiG-aGaiG~~~a~~L~~~g~-------~V~~~~r~~-~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~   72 (320)
T 3i83_A            2 SLNILVIG-TGAIGSFYGALLAKTGH-------CVSVVSRSD-YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKP   72 (320)
T ss_dssp             -CEEEEES-CCHHHHHHHHHHHHTTC-------EEEEECSTT-HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCC
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCh-HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCC
Confidence            36999999 69999999999998763       799999874 121111000011000000  01233455665655699


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      |+||++.-..    .            +++.++.+..+-.++..|+.+.|-++.... +.+.
T Consensus        73 DlVilavK~~----~------------~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~-l~~~  117 (320)
T 3i83_A           73 DCTLLCIKVV----E------------GADRVGLLRDAVAPDTGIVLISNGIDIEPE-VAAA  117 (320)
T ss_dssp             SEEEECCCCC----T------------TCCHHHHHTTSCCTTCEEEEECSSSSCSHH-HHHH
T ss_pred             CEEEEecCCC----C------------hHHHHHHHHhhcCCCCEEEEeCCCCChHHH-HHHH
Confidence            9999985322    1            112344455555566778888897764433 3344

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.97  E-value=2.8e-05  Score=69.16  Aligned_cols=117  Identities=17%  Similarity=0.107  Sum_probs=71.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeC---C---hhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATT---D---AVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~---~---~~~   77 (332)
                      .++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++....  ...++. +..   +   ..+
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~v~~   75 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLKGA-------KVALVDWNL--EAGVQCKAALHEQF--EPQKTLFIQCDVADQQQLRD   75 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHTTTS--CGGGEEEEECCTTSHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhhc--CCCceEEEecCCCCHHHHHH
Confidence            46899999999999999999998873       789999874  33332222232110  001111 111   1   122


Q ss_pred             hc-------CCCcEEEEeCCCCCCCCCCHHHHHHhhHH----HHHHHHHHHHhhcC-CCeEEEEecCcc
Q 020022           78 AC-------TGVNIAVMVGGFPRKEGMERKDVMSKNVS----IYKAQASALEQHAA-PNCKVLVVANPA  134 (332)
Q Consensus        78 al-------~~aDiVi~~ag~~~~~~~~r~~~~~~n~~----i~~~i~~~i~~~~~-~~~~viv~tNP~  134 (332)
                      ++       ...|++|+.||...  ..+....+..|+.    ..+.+.+.+.+... +...||++|...
T Consensus        76 ~~~~~~~~~g~id~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  142 (267)
T 2gdz_A           76 TFRKVVDHFGRLDILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA  142 (267)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcc
Confidence            22       35799999999763  2345666777765    56667777765431 136777777543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.97  E-value=2.2e-05  Score=69.86  Aligned_cols=150  Identities=16%  Similarity=0.127  Sum_probs=82.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cCCccceEee-CC---hhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPLLKGVVAT-TD---AVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~~~~~~~~~-~~---~~~a   78 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.... .....-+... ++   ..++
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   82 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-------KLSLVDVSS--EGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAY   82 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHH
Confidence            346899999999999999999998873       799999874  34433333332210 0000001111 11   1222


Q ss_pred             c-------CCCcEEEEeCCCCCC--C--CCC---HHHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           79 C-------TGVNIAVMVGGFPRK--E--GME---RKDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        79 l-------~~aDiVi~~ag~~~~--~--~~~---r~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                      +       ...|++|+.||....  +  ..+   .+..+..|+    ...+.+.+.+++..  ...||++|.....    
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~----  156 (267)
T 1iy8_A           83 VTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG--SGMVVNTASVGGI----  156 (267)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECCGGGT----
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CCEEEEEcchhhc----
Confidence            2       368999999997643  1  122   234455666    34556666666654  3567777754321    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                           .+.+....++.++.....+-+.++..+.
T Consensus       157 -----~~~~~~~~Y~asK~a~~~~~~~la~e~~  184 (267)
T 1iy8_A          157 -----RGIGNQSGYAAAKHGVVGLTRNSAVEYG  184 (267)
T ss_dssp             -----SBCSSBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -----cCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence                 1122222344444444556666666653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.97  E-value=8e-05  Score=66.92  Aligned_cols=153  Identities=14%  Similarity=0.182  Sum_probs=86.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eC---C---hh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TT---D---AV   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~---~---~~   76 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|++. .+.++....++.....   .++.. ..   +   ..
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-------~V~~~~r~~-~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~   92 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-------NIVLNGFGA-PDEIRTVTDEVAGLSS---GTVLHHPADMTKPSEIA   92 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEECCCC-HHHHHHHHHHHHTTCS---SCEEEECCCTTCHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC-hHHHHHHHHHHhhccC---CcEEEEeCCCCCHHHHH
Confidence            456899999999999999999999874       799999843 2334333333322110   11111 01   1   11


Q ss_pred             -------hhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           77 -------EACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        77 -------~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                             +.+...|++|+.||......   .+.   ...+..|+..    ++.+.+.+.+..  .+.||++|.....   
T Consensus        93 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~---  167 (281)
T 3v2h_A           93 DMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG--WGRIINIASAHGL---  167 (281)
T ss_dssp             HHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT---
T ss_pred             HHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CCEEEEECCcccc---
Confidence                   22347899999999864321   232   3345666644    444455555543  3677777754321   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                            .+.|..-.++.++.-...+-+.++..++  +..|+
T Consensus       168 ------~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  200 (281)
T 3v2h_A          168 ------VASPFKSAYVAAKHGIMGLTKTVALEVA--ESGVT  200 (281)
T ss_dssp             ------SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ------cCCCCchHHHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence                  1223222455555555667777777764  33454

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.97  E-value=0.0002  Score=62.53  Aligned_cols=155  Identities=15%  Similarity=0.119  Sum_probs=86.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee---CC---h---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT---TD---A---   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~---~~---~---   75 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|.+.|+++  +.++....++.........-+...   ++   .   
T Consensus        14 ~k~vlITGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~   84 (247)
T 3i1j_A           14 GRVILVTGAARGIGAAAARAYAAHGA-------SVVLLGRTE--ASLAEVSDQIKSAGQPQPLIIALNLENATAQQYREL   84 (247)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEecCH--HHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHH
Confidence            46899999999999999999998874       799999874  444433333332211100001111   11   1   


Q ss_pred             ----hhhcCCCcEEEEeCCCCCCCC----CCH---HHHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           76 ----VEACTGVNIAVMVGGFPRKEG----MER---KDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        76 ----~~al~~aDiVi~~ag~~~~~~----~~r---~~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                          .+.+...|++|+.||.....+    .+.   ...+..|+.....+    .+.+++.  +.++||++|.....    
T Consensus        85 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~~iv~isS~~~~----  158 (247)
T 3i1j_A           85 AARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS--EDASIAFTSSSVGR----  158 (247)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS--SSEEEEEECCGGGT----
T ss_pred             HHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC--CCCeEEEEcchhhc----
Confidence                122347899999999743221    232   33455666544444    4444443  24677777754331    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                           .+.+....++.++.--..+-+.++..+.- ...|+
T Consensus       159 -----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~~i~  192 (247)
T 3i1j_A          159 -----KGRANWGAYGVSKFATEGLMQTLADELEG-VTAVR  192 (247)
T ss_dssp             -----SCCTTCHHHHHHHHHHHHHHHHHHHHHTT-TSSEE
T ss_pred             -----CCCCCcchhHHHHHHHHHHHHHHHHHhcC-CCCeE
Confidence                 12222223455555556677777777641 24555

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=97.97  E-value=2e-05  Score=72.41  Aligned_cols=102  Identities=17%  Similarity=0.165  Sum_probs=65.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ++|||+||| +|.||..++..|+..|...   ..+|.++|+++..++++.    +...      .+..+++..+++++||
T Consensus        21 ~~mkI~iIG-~G~mG~ala~~L~~~G~~~---~~~V~v~~r~~~~~~~~~----l~~~------G~~~~~~~~e~~~~aD   86 (322)
T 2izz_A           21 QSMSVGFIG-AGQLAFALAKGFTAAGVLA---AHKIMASSPDMDLATVSA----LRKM------GVKLTPHNKETVQHSD   86 (322)
T ss_dssp             -CCCEEEES-CSHHHHHHHHHHHHTTSSC---GGGEEEECSCTTSHHHHH----HHHH------TCEEESCHHHHHHHCS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCC---cceEEEECCCccHHHHHH----HHHc------CCEEeCChHHHhccCC
Confidence            457999999 6999999999999876321   016899998742012221    2211      2334556778889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      +||++.- +               ..++++++.+.....++.+||.++|.+.
T Consensus        87 vVilav~-~---------------~~~~~vl~~l~~~l~~~~ivvs~s~gi~  122 (322)
T 2izz_A           87 VLFLAVK-P---------------HIIPFILDEIGADIEDRHIVVSCAAGVT  122 (322)
T ss_dssp             EEEECSC-G---------------GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred             EEEEEeC-H---------------HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence            9999852 1               1233455566665556676777777654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.97  E-value=0.0001  Score=66.30  Aligned_cols=156  Identities=11%  Similarity=0.121  Sum_probs=88.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV----   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~----   76 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........-+... ++   ..    
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  103 (281)
T 4dry_A           33 GRIALVTGGGTGVGRGIAQALSAEGY-------SVVITGRRP--DVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFA  103 (281)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHH
Confidence            46899999999999999999998874       799999874  444433344432211100001111 11   11    


Q ss_pred             ---hhcCCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           77 ---EACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        77 ---~al~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                         +.+...|++|+.||.....    ..+.   +..+..|+.-    ++.+.+.+.+...+.+.||++|.-...      
T Consensus       104 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~------  177 (281)
T 4dry_A          104 AVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ------  177 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC------
Confidence               2224679999999975322    1232   3355666644    555666666543224678887753321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+....++.++.....+-+.++..++  +..|+
T Consensus       178 ---~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  210 (281)
T 4dry_A          178 ---TPRPNSAPYTATKHAITGLTKSTALDGR--MHDIA  210 (281)
T ss_dssp             ---CCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---CCCCCChhHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence               1223222455555555667777777764  34554

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.96  E-value=9.1e-05  Score=65.90  Aligned_cols=155  Identities=16%  Similarity=0.125  Sum_probs=90.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEee-CC------h
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVAT-TD------A   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~-~~------~   75 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++....... ...+... ++      .
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~   79 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-------NVLINGRRE--ENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDV   79 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHH
Confidence            347899999999999999999999874       799999874  44443333443221000 0001111 11      1


Q ss_pred             hhhcCCCcEEEEeCCCCCCCC---CCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           76 VEACTGVNIAVMVGGFPRKEG---MERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~~---~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                      .+.+...|++|+.||......   .+.+   ..+..|+..    .+.+.+.+.+..  .+.||++|.....         
T Consensus        80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~---------  148 (267)
T 3t4x_A           80 IEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK--EGRVIFIASEAAI---------  148 (267)
T ss_dssp             HHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--EEEEEEECCGGGT---------
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCEEEEEcchhhc---------
Confidence            233457899999999764221   2333   346667655    555666665543  4677777754331         


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .+.+....++.++.-...+-+.++..++  +..|+
T Consensus       149 ~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~  181 (267)
T 3t4x_A          149 MPSQEMAHYSATKTMQLSLSRSLAELTT--GTNVT  181 (267)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTT--TSEEE
T ss_pred             cCCCcchHHHHHHHHHHHHHHHHHHHhC--CCCeE
Confidence            1222222455555555677777887765  45565

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.96  E-value=3e-05  Score=68.28  Aligned_cols=152  Identities=15%  Similarity=0.127  Sum_probs=85.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE--   77 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~--   77 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       +|++.|+++. +.++.   .+.... ....-+... ++   ..+  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~-~~~~~---~~~~~~-~~~~~~~~Dv~~~~~v~~~~   73 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-------DIAIADLVPA-PEAEA---AIRNLG-RRVLTVKCDVSQPGDVEAFG   73 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCC-HHHHH---HHHHTT-CCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCCch-hHHHH---HHHhcC-CcEEEEEeecCCHHHHHHHH
Confidence            346899999999999999999998874       7999998741 22321   222111 000001110 11   111  


Q ss_pred             -----hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           78 -----ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        78 -----al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                           .+...|++|+.||.....   ..+.   ...+..|+..    .+.+.+.+++..  .+.||++|.....      
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------  145 (249)
T 2ew8_A           74 KQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG--WGRIINLTSTTYW------  145 (249)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGG------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CeEEEEEcchhhc------
Confidence                 235789999999975422   1232   3455667655    455555566553  3577777754321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.|....++.++.....+-+.+++.+.  +..|+
T Consensus       146 ---~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  178 (249)
T 2ew8_A          146 ---LKIEAYTHYISTKAANIGFTRALASDLG--KDGIT  178 (249)
T ss_dssp             ---SCCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---cCCCCchhHHHHHHHHHHHHHHHHHHHH--hcCcE
Confidence               1222222345555555667777777664  34455

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.96  E-value=2.1e-05  Score=71.86  Aligned_cols=66  Identities=14%  Similarity=0.166  Sum_probs=49.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .+|||+||| .|.||..++..|+..|.       +|.++|+++  ++++.    +.+.      .+...++..+++++||
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~-------~V~~~dr~~--~~~~~----l~~~------g~~~~~~~~~~~~~aD   79 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGF-------KVTVWNRTL--SKCDE----LVEH------GASVCESPAEVIKKCK   79 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSG--GGGHH----HHHT------TCEECSSHHHHHHHCS
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHH----HHHC------CCeEcCCHHHHHHhCC
Confidence            357999999 79999999999998763       799999984  33321    2221      2344567888899999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +||++.
T Consensus        80 vvi~~v   85 (310)
T 3doj_A           80 YTIAML   85 (310)
T ss_dssp             EEEECC
T ss_pred             EEEEEc
Confidence            999985

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.96  E-value=2.2e-05  Score=69.86  Aligned_cols=151  Identities=13%  Similarity=0.065  Sum_probs=82.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCC-----
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTD-----   74 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~-----   74 (332)
                      |+.+.++|.|+||+|.+|.+++..|+..|.       +|++.|+++.  .+.   ..+.+... ....++....+     
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~~--~~~---~~~~~~~~~~~~~Dv~~~~~v~~~~   90 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGH-------RVIISYRTEH--ASV---TELRQAGAVALYGDFSCETGIMAFI   90 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTC-------CEEEEESSCC--HHH---HHHHHHTCEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCChH--HHH---HHHHhcCCeEEECCCCCHHHHHHHH
Confidence            333457899999999999999999998874       6899998852  221   11211110 00000000001     


Q ss_pred             --hhhhcCCCcEEEEeCCCCCCCC--CCH---HHHHHhhHHHHHH----HHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           75 --AVEACTGVNIAVMVGGFPRKEG--MER---KDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~~~--~~r---~~~~~~n~~i~~~----i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                        ..+.+...|++|+.||......  .+.   ...+..|+.....    +.+.+.+..  .+.||++|.....       
T Consensus        91 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~--~g~iv~isS~~~~-------  161 (260)
T 3gem_A           91 DLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE--VADIVHISDDVTR-------  161 (260)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS--SCEEEEECCGGGG-------
T ss_pred             HHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECChhhc-------
Confidence              1122347899999999754322  222   2345666654444    444444432  3567777754321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCC
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNV  174 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v  174 (332)
                        .+.+....++.++.-...+-+.++..++-
T Consensus       162 --~~~~~~~~Y~asKaa~~~l~~~la~e~~~  190 (260)
T 3gem_A          162 --KGSSKHIAYCATKAGLESLTLSFAARFAP  190 (260)
T ss_dssp             --TCCSSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --CCCCCcHhHHHHHHHHHHHHHHHHHHHCC
Confidence              12232234555666666777788888763

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.95  E-value=3.2e-05  Score=68.47  Aligned_cols=153  Identities=16%  Similarity=0.133  Sum_probs=87.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh--
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA--   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a--   78 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.+... ...-+... ++   ..++  
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~   81 (256)
T 3gaf_A           12 DAVAIVTGAAAGIGRAIAGTFAKAGA-------SVVVTDLKS--EGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIK   81 (256)
T ss_dssp             TCEEEECSCSSHHHHHHHHHHHHHTC-------EEEEEESSH--HHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHH
Confidence            46899999999999999999999874       799999874  444433333432210 00001110 11   1122  


Q ss_pred             -----cCCCcEEEEeCCCCCCC--CCCHH---HHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           79 -----CTGVNIAVMVGGFPRKE--GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        79 -----l~~aDiVi~~ag~~~~~--~~~r~---~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                           +...|++|+.||.....  ..+.+   ..+..|+.-.    +.+.+.+.+..  .+.||++|.....        
T Consensus        82 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~--------  151 (256)
T 3gaf_A           82 AALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG--GGAILNISSMAGE--------  151 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEEECCGGGT--------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEcCHHHc--------
Confidence                 23789999999975422  23332   3455666544    44444444433  4678888754321        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.+....++.++.-...+-+.++..++  +..|+
T Consensus       152 -~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  184 (256)
T 3gaf_A          152 -NTNVRMASYGSSKAAVNHLTRNIAFDVG--PMGIR  184 (256)
T ss_dssp             -CCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHHh--hhCcE
Confidence             1223222455555555677777777764  34565

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.95  E-value=1.8e-05  Score=69.53  Aligned_cols=157  Identities=18%  Similarity=0.138  Sum_probs=84.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh--
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA--   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a--   78 (332)
                      |+++.+++.|+||+|.+|.+++..|+..|.       ++++.|+++  +.++....++.  ......++....+..++  
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~   69 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGA-------RLVACDIEE--GPLREAAEAVG--AHPVVMDVADPASVERGFA   69 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHTTT--CEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHcC--CEEEEecCCCHHHHHHHHH
Confidence            666678999999999999999999998774       789999874  33332211110  00000000000011122  


Q ss_pred             -----cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHHHHhC
Q 020022           79 -----CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        79 -----l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                           +...|++|+.||.....   ..+   .+..+..|+.....+.+.+..+.  .+...||++|... .       + 
T Consensus        70 ~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~-------~-  140 (245)
T 1uls_A           70 EALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-Y-------L-  140 (245)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-G-------G-
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-h-------c-
Confidence                 23589999999976422   122   23456677766555554444331  1236777777532 1       1 


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       +.+....++.++.....+-+.++..+.  +..|+
T Consensus       141 -~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  172 (245)
T 1uls_A          141 -GNLGQANYAASMAGVVGLTRTLALELG--RWGIR  172 (245)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHh--HhCeE
Confidence             112112234344444455666666654  34555

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=97.94  E-value=3.1e-05  Score=71.07  Aligned_cols=112  Identities=19%  Similarity=0.250  Sum_probs=68.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc---CCccceEeeCChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~---~~~~~~~~~~~~~~al~   80 (332)
                      .++||+|+| +|.+|+.++..|+..|.       +|.++ .++  +.++....+-.....   ....++..+++. ++++
T Consensus        18 ~~~kI~IiG-aGa~G~~~a~~L~~~G~-------~V~l~-~~~--~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~   85 (318)
T 3hwr_A           18 QGMKVAIMG-AGAVGCYYGGMLARAGH-------EVILI-ARP--QHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQ   85 (318)
T ss_dssp             --CEEEEES-CSHHHHHHHHHHHHTTC-------EEEEE-CCH--HHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGT
T ss_pred             cCCcEEEEC-cCHHHHHHHHHHHHCCC-------eEEEE-EcH--hHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcC
Confidence            358999999 69999999999998763       78899 653  333322110000000   011234445555 4578


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      ++|+||++.-..                .++++++.+..+..++..|+.++|.++... .+.+.
T Consensus        86 ~~D~vilavk~~----------------~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~-~l~~~  132 (318)
T 3hwr_A           86 GADLVLFCVKST----------------DTQSAALAMKPALAKSALVLSLQNGVENAD-TLRSL  132 (318)
T ss_dssp             TCSEEEECCCGG----------------GHHHHHHHHTTTSCTTCEEEEECSSSSHHH-HHHHH
T ss_pred             CCCEEEEEcccc----------------cHHHHHHHHHHhcCCCCEEEEeCCCCCcHH-HHHHH
Confidence            999999984211                134666777776667777888899887543 34444

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.94  E-value=5.5e-06  Score=76.56  Aligned_cols=96  Identities=18%  Similarity=0.115  Sum_probs=60.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc--hhhhhhhHHHHhhhhcC-CccceEeeCChhhhcC-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--AEALNGVKMELVDAAFP-LLKGVVATTDAVEACT-   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~--~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al~-   80 (332)
                      ++||+|+||+|++|++++..|+..|.       +|+++++++.  .+++. ....+...... ...++.-...+.++++ 
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~~~~~~~~-~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~   81 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-------PTYILARPGPRSPSKAK-IFKALEDKGAIIVYGLINEQEAMEKILKE   81 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-------CEEEEECSSCCCHHHHH-HHHHHHHTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-------CEEEEECCCCCChhHHH-HHHHHHhCCcEEEEeecCCHHHHHHHHhh
Confidence            46899999999999999999998762       6888888641  12221 11112111100 0001111123456778 


Q ss_pred             -CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022           81 -GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA  121 (332)
Q Consensus        81 -~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~  121 (332)
                       ++|+||++++..             |+...+++++.+++..
T Consensus        82 ~~~d~Vi~~a~~~-------------n~~~~~~l~~aa~~~g  110 (346)
T 3i6i_A           82 HEIDIVVSTVGGE-------------SILDQIALVKAMKAVG  110 (346)
T ss_dssp             TTCCEEEECCCGG-------------GGGGHHHHHHHHHHHC
T ss_pred             CCCCEEEECCchh-------------hHHHHHHHHHHHHHcC
Confidence             999999998853             6666678888888875

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.94  E-value=3.7e-05  Score=69.01  Aligned_cols=154  Identities=17%  Similarity=0.146  Sum_probs=86.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC-------hhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD-------AVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~-------~~~   77 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........+++...+       ..+
T Consensus        29 gk~vlVTGas~gIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           29 GKVAIVTGAGAGIGLAVARRLADEGC-------HVLCADIDG--DAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             TCEEEETTTTSTHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999874       799999874  33433222221000000000000001       112


Q ss_pred             hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           78 ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      .+...|++|+.||.....   ..+.   +..+..|+..    .+.+.+.+.+..  .+.||++|.....         .+
T Consensus       100 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~g~Iv~isS~~~~---------~~  168 (277)
T 3gvc_A          100 AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG--GGAIVNLSSLAGQ---------VA  168 (277)
T ss_dssp             HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEEEECCGGGT---------SC
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEcchhhc---------cC
Confidence            234789999999975321   2232   3455667655    444455554443  4677787754321         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .+....++.++.....+-+.++..++  +..|+
T Consensus       169 ~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  199 (277)
T 3gvc_A          169 VGGTGAYGMSKAGIIQLSRITAAELR--SSGIR  199 (277)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence            23222455555555667777777764  34555

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.94  E-value=4.5e-05  Score=70.65  Aligned_cols=102  Identities=14%  Similarity=0.084  Sum_probs=61.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh----hhhcCCccce-EeeCChhh
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV----DAAFPLLKGV-VATTDAVE   77 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~----~~~~~~~~~~-~~~~~~~~   77 (332)
                      |++|||+||| +|.+|+.++..|...|.       ++.++|+++  ++++.......    ........++ ..+++..+
T Consensus         2 m~~mki~iiG-~G~~G~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (359)
T 1bg6_A            2 IESKTYAVLG-LGNGGHAFAAYLALKGQ-------SVLAWDIDA--QRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGL   71 (359)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHHHTSEEEESSSCCEEECCSEEESCHHH
T ss_pred             CCcCeEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHhcCCeEEeccccccccccceecCCHHH
Confidence            4567999999 69999999999988663       799999874  33332111100    0000000112 34566777


Q ss_pred             hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe
Q 020022           78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV  130 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~  130 (332)
                      +++++|+||++.....                .+++++.+..+..++..|+..
T Consensus        72 ~~~~~D~vi~~v~~~~----------------~~~~~~~l~~~l~~~~~vv~~  108 (359)
T 1bg6_A           72 AVKDADVILIVVPAIH----------------HASIAANIASYISEGQLIILN  108 (359)
T ss_dssp             HHTTCSEEEECSCGGG----------------HHHHHHHHGGGCCTTCEEEES
T ss_pred             HHhcCCEEEEeCCchH----------------HHHHHHHHHHhCCCCCEEEEc
Confidence            8899999999863221                134556666665566655444

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.94  E-value=3.2e-05  Score=69.07  Aligned_cols=154  Identities=9%  Similarity=0.031  Sum_probs=85.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chhh
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAVE   77 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~~   77 (332)
                      +++.++|.|+||+|++|.+++..|+..|.       +|.+.|+++  +.++.....+.... ....-+... +   +..+
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~  100 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGA-------DVAIWYNSH--PADEKAEHLQKTYG-VHSKAYKCNISDPKSVEE  100 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTC-------EEEEEESSS--CCHHHHHHHHHHHC-SCEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcC-CcceEEEeecCCHHHHHH
Confidence            34557899999999999999999998763       789999875  22322222222111 000001110 1   1122


Q ss_pred             hc-------CCCcEEEEeCCCCCC-C----CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           78 AC-------TGVNIAVMVGGFPRK-E----GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        78 al-------~~aDiVi~~ag~~~~-~----~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                      ++       ...|+||+.||.... .    ..+   ....+..|+..    .+.+.+.+++.. . ..||++|...... 
T Consensus       101 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~-~~iv~isS~~~~~-  177 (279)
T 3ctm_A          101 TISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-K-GSLIITSSISGKI-  177 (279)
T ss_dssp             HHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C-CEEEEECCCTTSC-
T ss_pred             HHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-CeEEEECchHhcc-
Confidence            22       348999999997533 1    112   22345666655    667777777654 2 4677776533210 


Q ss_pred             HHHHHhCCC-CCCCcEEEechHHHHHHHHHHHHHcCCC
Q 020022          139 LILKEFAPS-IPAKNITCLTRLDHNRALGQISEKLNVQ  175 (332)
Q Consensus       139 ~~~~~~~~~-~~~~~i~~~t~lds~r~~~~la~~l~v~  175 (332)
                             +. .+....++.++.-...+-+.+++.++-.
T Consensus       178 -------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  208 (279)
T 3ctm_A          178 -------VNIPQLQAPYNTAKAACTHLAKSLAIEWAPF  208 (279)
T ss_dssp             -------C---CCHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             -------CCCCCCcccHHHHHHHHHHHHHHHHHHhccc
Confidence                   00 1211234555555566777778777643

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.94  E-value=4.1e-05  Score=70.07  Aligned_cols=71  Identities=11%  Similarity=0.103  Sum_probs=48.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      +.++||+||| .|.+|..++..|+..|. .     +|.++|++++++..+    .+...      .+...++..+++++|
T Consensus        22 ~~~~~I~iIG-~G~mG~~~A~~L~~~G~-~-----~V~~~dr~~~~~~~~----~~~~~------g~~~~~~~~e~~~~a   84 (312)
T 3qsg_A           22 SNAMKLGFIG-FGEAASAIASGLRQAGA-I-----DMAAYDAASAESWRP----RAEEL------GVSCKASVAEVAGEC   84 (312)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHHSC-C-----EEEEECSSCHHHHHH----HHHHT------TCEECSCHHHHHHHC
T ss_pred             CCCCEEEEEC-ccHHHHHHHHHHHHCCC-C-----eEEEEcCCCCHHHHH----HHHHC------CCEEeCCHHHHHhcC
Confidence            3467999999 79999999999998763 2     699999962112221    12221      233456778889999


Q ss_pred             cEEEEeCC
Q 020022           83 NIAVMVGG   90 (332)
Q Consensus        83 DiVi~~ag   90 (332)
                      |+||++..
T Consensus        85 DvVi~~vp   92 (312)
T 3qsg_A           85 DVIFSLVT   92 (312)
T ss_dssp             SEEEECSC
T ss_pred             CEEEEecC
Confidence            99999853

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.94  E-value=4e-06  Score=74.27  Aligned_cols=152  Identities=16%  Similarity=0.086  Sum_probs=80.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc---CCccceE-eeCC-----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVV-ATTD-----   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~---~~~~~~~-~~~~-----   74 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++.....   ....++. ...|     
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   76 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-------TVAACDLDR--AAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEAR   76 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHTC------------CCEEEECCTTSHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHHHhcCccccccCcceEEEEecCCCHH
Confidence            346899999999999999999998763       799999874  333322222211100   0000111 1111     


Q ss_pred             -hhhhcCC-------C-cEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhc---CCCeEEEEecCcccc
Q 020022           75 -AVEACTG-------V-NIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANT  136 (332)
Q Consensus        75 -~~~al~~-------a-DiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~---~~~~~viv~tNP~~~  136 (332)
                       ..+++++       . |+||+.||.....   ..+   ....+..|+.....+.+.+.++.   ...++||++|.....
T Consensus        77 ~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  156 (264)
T 2pd6_A           77 AARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGK  156 (264)
T ss_dssp             HHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH
T ss_pred             HHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhc
Confidence             1223333       3 9999999976421   122   23455667665555555544331   113577777753221


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                             .  +.+....++.++.....+.+.+++.+.
T Consensus       157 -------~--~~~~~~~Y~~sK~a~~~~~~~la~e~~  184 (264)
T 2pd6_A          157 -------V--GNVGQTNYAASKAGVIGLTQTAARELG  184 (264)
T ss_dssp             -------H--CCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -------c--CCCCChhhHHHHHHHHHHHHHHHHHhh
Confidence                   1  123222345555555556666666643

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=97.93  E-value=2.2e-05  Score=69.60  Aligned_cols=94  Identities=16%  Similarity=0.130  Sum_probs=63.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ++|||+||| +|.+|+.++..|...+...   ..++.++|+++.  +         .       .+...++..++++++|
T Consensus         3 ~~m~i~iiG-~G~mG~~~a~~l~~~g~~~---~~~v~~~~~~~~--~---------~-------g~~~~~~~~~~~~~~D   60 (262)
T 2rcy_A            3 ENIKLGFMG-LGQMGSALAHGIANANIIK---KENLFYYGPSKK--N---------T-------TLNYMSSNEELARHCD   60 (262)
T ss_dssp             SSSCEEEEC-CSHHHHHHHHHHHHHTSSC---GGGEEEECSSCC--S---------S-------SSEECSCHHHHHHHCS
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCCC---CCeEEEEeCCcc--c---------C-------ceEEeCCHHHHHhcCC
Confidence            356999999 6999999999998876311   016899998752  2         0       1234456778888999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      +||++.. +    ..           ++++.+.+..+. ++..++..+|.++.
T Consensus        61 ~vi~~v~-~----~~-----------~~~v~~~l~~~l-~~~~vv~~~~gi~~   96 (262)
T 2rcy_A           61 IIVCAVK-P----DI-----------AGSVLNNIKPYL-SSKLLISICGGLNI   96 (262)
T ss_dssp             EEEECSC-T----TT-----------HHHHHHHSGGGC-TTCEEEECCSSCCH
T ss_pred             EEEEEeC-H----HH-----------HHHHHHHHHHhc-CCCEEEEECCCCCH
Confidence            9999853 1    11           334555566655 45667777887654

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=97.93  E-value=3.3e-05  Score=72.13  Aligned_cols=73  Identities=21%  Similarity=0.297  Sum_probs=49.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh----cCCccceEeeCChhhhcCCC
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----FPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~----~~~~~~~~~~~~~~~al~~a   82 (332)
                      ||+||| +|.+|.+++..|+..|.       +|.++|+++  +.++..........    .....++..+++..++++++
T Consensus        17 kI~iIG-~G~mG~~la~~L~~~G~-------~V~~~~r~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   86 (366)
T 1evy_A           17 KAVVFG-SGAFGTALAMVLSKKCR-------EVCVWHMNE--EEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGA   86 (366)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTTEE-------EEEEECSCH--HHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTC
T ss_pred             eEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHcCcccccccccccccceeeeCCHHHHHcCC
Confidence            999999 69999999999987763       799999874  33332211100000    01122466667777889999


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+||++.
T Consensus        87 DvVilav   93 (366)
T 1evy_A           87 EIILFVI   93 (366)
T ss_dssp             SSEEECC
T ss_pred             CEEEECC
Confidence            9999984

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.93  E-value=8.3e-06  Score=72.13  Aligned_cols=150  Identities=11%  Similarity=0.057  Sum_probs=80.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeC-CCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI-PPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~-~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a   78 (332)
                      +.++|.|+||+|++|++++..|+..|.       +|++.++ ++  +.++....++...... ..-+... ++   ..++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~l~~~~~~-~~~~~~D~~~~~~~~~~   75 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-------KVVVNYRSKE--DEANSVLEEIKKVGGE-AIAVKGDVTVESDVINL   75 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSCH--HHHHHHHHHHHHTTCE-EEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEcCCCh--HHHHHHHHHHHhcCCc-eEEEECCCCCHHHHHHH
Confidence            357899999999999999999998763       7899998 42  3333222333221100 0000010 11   1122


Q ss_pred             c-------CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHH----HHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           79 C-------TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        79 l-------~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~----i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                      +       .+.|+||+.||.....   ..+.   ...+..|+.....    +.+.+.+.. +..+||++|.-...     
T Consensus        76 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~iv~isS~~~~-----  149 (261)
T 1gee_A           76 VQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND-IKGTVINMSSVHEK-----  149 (261)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCCEEEEECCGGGT-----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCCEEEEeCCHHhc-----
Confidence            2       3789999999975421   1222   3445666654444    444444432 13567777753221     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                          .+.+....++.++.....+.+.+++.+.
T Consensus       150 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~  177 (261)
T 1gee_A          150 ----IPWPLFVHYAASKGGMKLMTETLALEYA  177 (261)
T ss_dssp             ----SCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----CCCCCccHHHHHHHHHHHHHHHHHHHhc
Confidence                1223222445555555566666666653

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=97.92  E-value=8.7e-05  Score=66.83  Aligned_cols=97  Identities=12%  Similarity=0.049  Sum_probs=61.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +++||+||| +|.+|+.++..|...+. +    .+|.++|+++  +.++    .+.....    ....+++..+++++||
T Consensus         5 ~~~~I~iIG-~G~mG~~~a~~l~~~g~-~----~~V~~~d~~~--~~~~----~~~~~g~----~~~~~~~~~~~~~~aD   68 (290)
T 3b1f_A            5 EEKTIYIAG-LGLIGASLALGIKRDHP-H----YKIVGYNRSD--RSRD----IALERGI----VDEATADFKVFAALAD   68 (290)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHCT-T----SEEEEECSSH--HHHH----HHHHTTS----CSEEESCTTTTGGGCS
T ss_pred             ccceEEEEe-eCHHHHHHHHHHHhCCC-C----cEEEEEcCCH--HHHH----HHHHcCC----cccccCCHHHhhcCCC
Confidence            457999999 79999999999987642 1    1799999874  3332    1211110    0023456667889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-cCCCeEEEEecC
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH-AAPNCKVLVVAN  132 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~~viv~tN  132 (332)
                      +||++...                ...+++++.+..+ .+++.+|+.++|
T Consensus        69 vVilavp~----------------~~~~~v~~~l~~~~l~~~~ivi~~~~  102 (290)
T 3b1f_A           69 VIILAVPI----------------KKTIDFIKILADLDLKEDVIITDAGS  102 (290)
T ss_dssp             EEEECSCH----------------HHHHHHHHHHHTSCCCTTCEEECCCS
T ss_pred             EEEEcCCH----------------HHHHHHHHHHHhcCCCCCCEEEECCC
Confidence            99998521                1124556666665 446666665555

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=97.92  E-value=1.6e-05  Score=70.20  Aligned_cols=99  Identities=14%  Similarity=0.267  Sum_probs=61.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+||| +|.+|..++..|+..+...   +.+|.++|+++  ++++.....+         .+....+..+++++||+|
T Consensus         3 ~~i~iIG-~G~mG~~~a~~l~~~g~~~---~~~V~~~~r~~--~~~~~~~~~~---------g~~~~~~~~e~~~~aDvV   67 (247)
T 3gt0_A            3 KQIGFIG-CGNMGMAMIGGMINKNIVS---SNQIICSDLNT--ANLKNASEKY---------GLTTTTDNNEVAKNADIL   67 (247)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTSSC---GGGEEEECSCH--HHHHHHHHHH---------CCEECSCHHHHHHHCSEE
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhCCCCC---CCeEEEEeCCH--HHHHHHHHHh---------CCEEeCChHHHHHhCCEE
Confidence            6899999 7999999999999876422   11689999974  3333221111         233456778889999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      |++.  +  +.            .++++.+.+..+.+|+..+|..++.+.
T Consensus        68 ilav--~--~~------------~~~~v~~~l~~~l~~~~~vvs~~~gi~  101 (247)
T 3gt0_A           68 ILSI--K--PD------------LYASIINEIKEIIKNDAIIVTIAAGKS  101 (247)
T ss_dssp             EECS--C--TT------------THHHHC---CCSSCTTCEEEECSCCSC
T ss_pred             EEEe--C--HH------------HHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence            9986  1  11            133555666666556655543444433

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.92  E-value=3.1e-05  Score=68.43  Aligned_cols=155  Identities=12%  Similarity=0.055  Sum_probs=88.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhhhc-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC-   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~al-   79 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++......   ...+++...+..+++ 
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   76 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-------TVFAGRRNG--EKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN   76 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-------EEEEEESSG--GGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHH
Confidence            457899999999999999999999874       799999974  4454444444322100   000000001112222 


Q ss_pred             -----CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           80 -----TGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        80 -----~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                           ...|++|+.||.....   ..+.   ...+..|+.    ..+.+.+.+++..  .+.||++|.-...        
T Consensus        77 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~--------  146 (252)
T 3h7a_A           77 AADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG--QGKIFFTGATASL--------  146 (252)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEEGGGT--------
T ss_pred             HHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEECCHHHc--------
Confidence                 3679999999986422   1232   334555654    4455556666553  3667777653321        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.+....++.++.--..+-+.++..++  +..|+
T Consensus       147 -~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~  179 (252)
T 3h7a_A          147 -RGGSGFAAFASAKFGLRAVAQSMARELM--PKNIH  179 (252)
T ss_dssp             -CCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -CCCCCCccHHHHHHHHHHHHHHHHHHhh--hcCCE
Confidence             1223222345555555667777777765  34565

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.91  E-value=4e-05  Score=68.18  Aligned_cols=149  Identities=11%  Similarity=0.087  Sum_probs=82.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch-hhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-EALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .++|.|+||+|++|.+++..|+..|.       +|++.|+++.. ........|+.+....  ..  ......+.+.+.|
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~Dl~~~~~v--~~--~~~~~~~~~g~iD   76 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGS-------KVIDLSIHDPGEAKYDHIECDVTNPDQV--KA--SIDHIFKEYGSIS   76 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESSCCCSCSSEEEECCTTCHHHH--HH--HHHHHHHHHSCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEecCcccCCceEEEEecCCCHHHH--HH--HHHHHHHHcCCCC
Confidence            46899999999999999999998874       78999987521 0111112233221100  00  0001122234799


Q ss_pred             EEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           84 IAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        84 iVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      ++|+.||.....   ..+   ....+..|+.....+.+.+..+.  .+.+.||++|.....         .+.+....++
T Consensus        77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~---------~~~~~~~~Y~  147 (264)
T 2dtx_A           77 VLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQAS---------IITKNASAYV  147 (264)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGT---------SCCTTBHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhc---------cCCCCchhHH
Confidence            999999975421   122   33456667765444444443321  123567777754321         1223222455


Q ss_pred             echHHHHHHHHHHHHHcC
Q 020022          156 LTRLDHNRALGQISEKLN  173 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~  173 (332)
                      .++.....+-+.++..++
T Consensus       148 ~sK~a~~~~~~~la~e~~  165 (264)
T 2dtx_A          148 TSKHAVIGLTKSIALDYA  165 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            555555677777887776

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.91  E-value=2.1e-05  Score=73.50  Aligned_cols=93  Identities=16%  Similarity=0.253  Sum_probs=62.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV-   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a-   82 (332)
                      +.|||+||| .|.||..++..|+..|.       +|.++|+++  ++++    .+...      .+...++..++++++ 
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~-------~V~v~dr~~--~~~~----~l~~~------g~~~~~s~~e~~~~a~   80 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGGH-------ECVVYDLNV--NAVQ----ALERE------GIAGARSIEEFCAKLV   80 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHH----HHHTT------TCBCCSSHHHHHHHSC
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCCC-------EEEEEeCCH--HHHH----HHHHC------CCEEeCCHHHHHhcCC
Confidence            357999999 79999999999998763       799999974  3332    22221      122345677878888 


Q ss_pred             --cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           83 --NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        83 --DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                        |+||++...+                .++++++.+.....++.+||..||
T Consensus        81 ~~DvVi~~vp~~----------------~v~~vl~~l~~~l~~g~iiId~st  116 (358)
T 4e21_A           81 KPRVVWLMVPAA----------------VVDSMLQRMTPLLAANDIVIDGGN  116 (358)
T ss_dssp             SSCEEEECSCGG----------------GHHHHHHHHGGGCCTTCEEEECSS
T ss_pred             CCCEEEEeCCHH----------------HHHHHHHHHHhhCCCCCEEEeCCC
Confidence              9999984211                133444566666556777777765

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.91  E-value=2e-05  Score=72.34  Aligned_cols=121  Identities=17%  Similarity=0.114  Sum_probs=68.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEee-CC---hhhhc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVAT-TD---AVEAC   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~-~~---~~~al   79 (332)
                      .++|.|+||+|++|.+++..|+..|.       .|++.|+++  +.++....++...... ...-+... ++   ..+++
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~-------~Vv~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~   78 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGC-------KVAIADIRQ--DSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAA   78 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHH
Confidence            46899999999999999999998874       799999984  4444333333321100 00001110 11   12222


Q ss_pred             -------CCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHH----HHHHHHHHhh----cCCCeEEEEecCcc
Q 020022           80 -------TGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIY----KAQASALEQH----AAPNCKVLVVANPA  134 (332)
Q Consensus        80 -------~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~----~~i~~~i~~~----~~~~~~viv~tNP~  134 (332)
                             ...|++|++||+.....   .+   ....+..|+...    +.+.+.+.+.    ..+.+.||++|.-.
T Consensus        79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a  154 (319)
T 3ioy_A           79 DEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMA  154 (319)
T ss_dssp             HHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGG
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccc
Confidence                   36799999999753211   22   234556665444    4444444433    01245677777543

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.90  E-value=3.9e-05  Score=70.39  Aligned_cols=71  Identities=13%  Similarity=0.144  Sum_probs=48.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcc-cCCCCCceEEEEEeCCCc-hhhhhhhHHHHhhhhcCCccceEeeC-ChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPA-AEALNGVKMELVDAAFPLLKGVVATT-DAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~-~~~l~~~~~dl~~~~~~~~~~~~~~~-~~~~al~   80 (332)
                      +++||+||| +|.+|..++..|+..| .       +|.++|++++ .++.+.....+...      .+  .+ +..++++
T Consensus        23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~-------~V~~~dr~~~~~~~~~~~~~~~~~~------g~--~~~s~~e~~~   86 (317)
T 4ezb_A           23 MMTTIAFIG-FGEAAQSIAGGLGGRNAA-------RLAAYDLRFNDPAASGALRARAAEL------GV--EPLDDVAGIA   86 (317)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCS-------EEEEECGGGGCTTTHHHHHHHHHHT------TC--EEESSGGGGG
T ss_pred             cCCeEEEEC-ccHHHHHHHHHHHHcCCC-------eEEEEeCCCccccchHHHHHHHHHC------CC--CCCCHHHHHh
Confidence            457999999 7999999999999876 3       7999999741 01121122222221      11  33 5778899


Q ss_pred             CCcEEEEeCC
Q 020022           81 GVNIAVMVGG   90 (332)
Q Consensus        81 ~aDiVi~~ag   90 (332)
                      +||+||++..
T Consensus        87 ~aDvVi~avp   96 (317)
T 4ezb_A           87 CADVVLSLVV   96 (317)
T ss_dssp             GCSEEEECCC
T ss_pred             cCCEEEEecC
Confidence            9999999853

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.90  E-value=3.9e-05  Score=68.56  Aligned_cols=150  Identities=11%  Similarity=0.059  Sum_probs=78.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~~~al~~a   82 (332)
                      ++|||.|+|| |++|++++..|+..|.       +|+.+++++  ....    .+.....   .-+... ++. + ++++
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~-------~V~~~~r~~--~~~~----~~~~~~~---~~~~~D~~d~-~-~~~~   64 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGW-------RIIGTSRNP--DQME----AIRASGA---EPLLWPGEEP-S-LDGV   64 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTC-------EEEEEESCG--GGHH----HHHHTTE---EEEESSSSCC-C-CTTC
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCC-------EEEEEEcCh--hhhh----hHhhCCC---eEEEeccccc-c-cCCC
Confidence            3579999996 9999999999998763       789998874  2221    1111110   001110 122 2 7899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEech
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCLTR  158 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~t~  158 (332)
                      |+||++|+.....           .+..+.+.+.+++.+..-.++|++|.. .+...    .+.+. .-..+...++.++
T Consensus        65 d~vi~~a~~~~~~-----------~~~~~~l~~a~~~~~~~~~~~v~~Ss~-~vyg~~~~~~~~E~-~~~~p~~~Y~~sK  131 (286)
T 3ius_A           65 THLLISTAPDSGG-----------DPVLAALGDQIAARAAQFRWVGYLSTT-AVYGDHDGAWVDET-TPLTPTAARGRWR  131 (286)
T ss_dssp             CEEEECCCCBTTB-----------CHHHHHHHHHHHHTGGGCSEEEEEEEG-GGGCCCTTCEECTT-SCCCCCSHHHHHH
T ss_pred             CEEEECCCccccc-----------cHHHHHHHHHHHhhcCCceEEEEeecc-eecCCCCCCCcCCC-CCCCCCCHHHHHH
Confidence            9999999865321           122356666666632112356665532 11000    00000 0011112234444


Q ss_pred             HHHHHHHHHHHHHc-CCCCCCeeeeEEEeccC
Q 020022          159 LDHNRALGQISEKL-NVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       159 lds~r~~~~la~~l-~v~~~~v~~~~v~G~hg  189 (332)
                      ....++    .+.+ +++..-++...|+|...
T Consensus       132 ~~~E~~----~~~~~~~~~~ilRp~~v~G~~~  159 (286)
T 3ius_A          132 VMAEQQ----WQAVPNLPLHVFRLAGIYGPGR  159 (286)
T ss_dssp             HHHHHH----HHHSTTCCEEEEEECEEEBTTB
T ss_pred             HHHHHH----HHhhcCCCEEEEeccceECCCc
Confidence            443333    3333 77777778777788643

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.90  E-value=2.2e-05  Score=70.87  Aligned_cols=64  Identities=17%  Similarity=0.280  Sum_probs=48.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+||| .|.+|..++..|+..|.       +|.++|+++  ++++.    +.+.      .+...++..+++++||+|
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~-------~V~~~dr~~--~~~~~----~~~~------g~~~~~~~~~~~~~advv   61 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGF-------DVTVWNRNP--AKCAP----LVAL------GARQASSPAEVCAACDIT   61 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTC-------CEEEECSSG--GGGHH----HHHH------TCEECSCHHHHHHHCSEE
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHHH----HHHC------CCeecCCHHHHHHcCCEE
Confidence            5899999 79999999999998763       699999985  33321    2221      234456788889999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        62 i~~v   65 (287)
T 3pdu_A           62 IAML   65 (287)
T ss_dssp             EECC
T ss_pred             EEEc
Confidence            9985

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.90  E-value=5.3e-05  Score=67.19  Aligned_cols=149  Identities=17%  Similarity=0.172  Sum_probs=82.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV---   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~---   76 (332)
                      ..++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++...... ..-+... ++   ..   
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~   97 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-------RVVLTARDV--EKLRAVEREIVAAGGE-AESHACDLSHSDAIAAFA   97 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCE-EEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHhCCc-eeEEEecCCCHHHHHHHH
Confidence            347899999999999999999998874       799999874  4444443444322100 0000110 11   11   


Q ss_pred             ----hhcCCCcEEEEeCCCCCCCC----CC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           77 ----EACTGVNIAVMVGGFPRKEG----ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        77 ----~al~~aDiVi~~ag~~~~~~----~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                          +.+...|+||+.||.....+    .+   ....+..|+..    .+.+.+.+.+..  .+.||++|.....     
T Consensus        98 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~-----  170 (262)
T 3rkr_A           98 TGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK--RGHIINISSLAGK-----  170 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CCEEEEECSSCSS-----
T ss_pred             HHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CceEEEEechhhc-----
Confidence                22246899999999732221    22   23445666654    444444454433  3567777754331     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                          .+.+....++.++.-...+-+.+++.+.
T Consensus       171 ----~~~~~~~~Y~asKaa~~~l~~~la~e~~  198 (262)
T 3rkr_A          171 ----NPVADGAAYTASKWGLNGLMTSAAEELR  198 (262)
T ss_dssp             ----CCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----CCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence                1222222345555544566666776653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.89  E-value=2.2e-05  Score=71.29  Aligned_cols=154  Identities=18%  Similarity=0.168  Sum_probs=86.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhhc-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEAC-   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~al-   79 (332)
                      .++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++...... ..-+... ++   ..+++ 
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~Dv~d~~~v~~~~~  100 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFARRGA-------RLVLSDVDQ--PALEQAVNGLRGQGFD-AHGVVCDVRHLDEMVRLAD  100 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCC-EEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCc-eEEEEccCCCHHHHHHHHH
Confidence            36899999999999999999999874       799999974  4444444444322110 0001110 11   12222 


Q ss_pred             ------CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           80 ------TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        80 ------~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                            ...|++|+.||.....   ..+.   ...+..|+..    ++.+.+.+.+.. +.+.|+++|.....       
T Consensus       101 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~~g~iv~isS~~~~-------  172 (301)
T 3tjr_A          101 EAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQG-TGGHIAFTASFAGL-------  172 (301)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-SCEEEEEECCGGGT-------
T ss_pred             HHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCcEEEEeCchhhc-------
Confidence                  3789999999986421   1232   3445566544    444444455543 24677777754331       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.|..-.++.++.-...+-+.++..+.  +..|+
T Consensus       173 --~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  205 (301)
T 3tjr_A          173 --VPNAGLGTYGVAKYGVVGLAETLAREVK--PNGIG  205 (301)
T ss_dssp             --SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence              1222222344455444556666666653  34555

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.89  E-value=5.2e-05  Score=67.64  Aligned_cols=152  Identities=14%  Similarity=0.213  Sum_probs=87.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV---   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~---   76 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++...... ..-+... ++   ..   
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~Dv~d~~~v~~~~   72 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-------KILLGARRQ--ARIEAIATEIRDAGGT-ALAQVLDVTDRHSVAAFA   72 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHHHTTCE-EEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCc-EEEEEcCCCCHHHHHHHH
Confidence            446899999999999999999998874       799999874  4454444444332100 0000000 11   11   


Q ss_pred             ----hhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           77 ----EACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        77 ----~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                          +.+...|++|+.||......   .+.   ...+..|+..    ++.+.+.+++..  .+.||++|.-...      
T Consensus        73 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~g~IV~isS~~~~------  144 (264)
T 3tfo_A           73 QAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR--SGQIINIGSIGAL------  144 (264)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEEcCHHHc------
Confidence                22347899999999864221   232   3345566544    445555555543  3677787754331      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+..-.++.++.-...+-+.++..+   + .|+
T Consensus       145 ---~~~~~~~~Y~asKaal~~l~~~la~e~---~-gIr  175 (264)
T 3tfo_A          145 ---SVVPTAAVYCATKFAVRAISDGLRQES---T-NIR  175 (264)
T ss_dssp             ---CCCTTCHHHHHHHHHHHHHHHHHHHHC---S-SEE
T ss_pred             ---ccCCCChhHHHHHHHHHHHHHHHHHhC---C-CCE
Confidence               122322234555555556667777775   2 666

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.89  E-value=3.3e-05  Score=69.07  Aligned_cols=154  Identities=14%  Similarity=0.158  Sum_probs=87.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhhh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA---   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~a---   78 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++......   ...++....+..++   
T Consensus        26 gk~~lVTGas~gIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~   96 (271)
T 4ibo_A           26 GRTALVTGSSRGLGRAMAEGLAVAGA-------RILINGTDP--SRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFAR   96 (271)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEECCSCH--HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            46899999999999999999999874       799999874  4444444444332110   00011111111222   


Q ss_pred             ----cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           79 ----CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        79 ----l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                          +...|++|+.||.....   ..+.+   ..+..|+...    +.+.+.+.+..  .+.||++|.....        
T Consensus        97 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iV~isS~~~~--------  166 (271)
T 4ibo_A           97 LDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG--YGKIVNIGSLTSE--------  166 (271)
T ss_dssp             HHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT--------
T ss_pred             HHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEccHHhC--------
Confidence                23789999999975422   12333   3456666444    44455555543  3677777753321        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.+....++.++.-...+-+.++..++  +..|+
T Consensus       167 -~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  199 (271)
T 4ibo_A          167 -LARATVAPYTVAKGGIKMLTRAMAAEWA--QYGIQ  199 (271)
T ss_dssp             -SBCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHHh--hhCeE
Confidence             1223222355555555667777777764  34565

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.89  E-value=2e-05  Score=71.09  Aligned_cols=166  Identities=13%  Similarity=0.032  Sum_probs=91.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc---C
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC---T   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al---~   80 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........+++...+..+++   .
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   85 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-------TVIMAVRDT--RKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVS   85 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcC
Confidence            347899999999999999999998874       799999874  3333222211000000000000000112222   3


Q ss_pred             CCcEEEEeCCCCCCC----CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH-h--C-CCCCCCc
Q 020022           81 GVNIAVMVGGFPRKE----GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE-F--A-PSIPAKN  152 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~----~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~-~--~-~~~~~~~  152 (332)
                      ..|++|+.||+....    ....+..+..|+.....+.+.+.....  .+||++|.........-.. .  . ..+++..
T Consensus        86 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~--~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
T 3rd5_A           86 GADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLT--DRVVTVSSMAHWPGRINLEDLNWRSRRYSPWL  163 (291)
T ss_dssp             CEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE--EEEEEECCGGGTTCCCCSSCTTCSSSCCCHHH
T ss_pred             CCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hheeEeechhhccCCCCcccccccccCCCCcc
Confidence            679999999975322    123446788899888888888887763  3677777543221000000 0  0 0011111


Q ss_pred             EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          153 ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       153 i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .++.++.-...+-+.+++.++-.-..|+
T Consensus       164 ~Y~~sK~a~~~~~~~la~e~~~~g~~i~  191 (291)
T 3rd5_A          164 AYSQSKLANLLFTSELQRRLTAAGSPLR  191 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCCCCEE
Confidence            3555565556667777777653322355

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.89  E-value=2.8e-05  Score=68.55  Aligned_cols=101  Identities=14%  Similarity=0.183  Sum_probs=61.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhh--hhhh--------HHHHhhhhcCCccceEeeC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA--LNGV--------KMELVDAAFPLLKGVVATT   73 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~--l~~~--------~~dl~~~~~~~~~~~~~~~   73 (332)
                      ..+||+||| +|.+|++++..|+..|.       +|.++|+++  ++  .+..        ..++...   . ... ..+
T Consensus        18 ~~~kIgiIG-~G~mG~alA~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~---~-~~~-~~~   82 (245)
T 3dtt_A           18 QGMKIAVLG-TGTVGRTMAGALADLGH-------EVTIGTRDP--KATLARAEPDAMGAPPFSQWLPE---H-PHV-HLA   82 (245)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHTCC-------CCHHHHGGG---S-TTC-EEE
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCh--hhhhhhhhhhhhcchhhhHHHhh---c-Cce-ecc
Confidence            358999999 79999999999998763       799999985  22  1111        1111111   0 111 234


Q ss_pred             ChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           74 DAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        74 ~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      +..+++++||+||++.-..            .-.+.+.++.   .... ++.+||.++||.+
T Consensus        83 ~~~e~~~~aDvVilavp~~------------~~~~~~~~i~---~~~l-~g~ivi~~s~~~~  128 (245)
T 3dtt_A           83 AFADVAAGAELVVNATEGA------------SSIAALTAAG---AENL-AGKILVDIANPLD  128 (245)
T ss_dssp             EHHHHHHHCSEEEECSCGG------------GHHHHHHHHC---HHHH-TTSEEEECCCCEE
T ss_pred             CHHHHHhcCCEEEEccCcH------------HHHHHHHHhh---hhhc-CCCEEEECCCCCC
Confidence            5678899999999985211            1112233331   2222 4567888999874

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.89  E-value=3.4e-05  Score=69.35  Aligned_cols=153  Identities=20%  Similarity=0.126  Sum_probs=83.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC------
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD------   74 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~------   74 (332)
                      |+.+.+++.|+||+|.+|.+++..|+..|.       +|++.|++.  +.++....++.........+++...+      
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   71 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGA-------RVAVLDKSA--ERLRELEVAHGGNAVGVVGDVRSLQDQKRAAE   71 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHTBTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCCH--HHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHH
Confidence            766778999999999999999999999874       799999874  33332222111000000000000001      


Q ss_pred             -hhhhcCCCcEEEEeCCCCCCCC--------CC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           75 -AVEACTGVNIAVMVGGFPRKEG--------ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        75 -~~~al~~aDiVi~~ag~~~~~~--------~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                       ..+.+...|++|+.||......        .+   .+..+..|+..    ++.+.+.+.+.  + +.+|+++.-...  
T Consensus        72 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~-g~iv~isS~~~~--  146 (281)
T 3zv4_A           72 RCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--R-GSVVFTISNAGF--  146 (281)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--T-CEEEEECCGGGT--
T ss_pred             HHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--C-CeEEEEecchhc--
Confidence             1122346799999999743211        11   23345566644    44444544443  2 456666643321  


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCC
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNV  174 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v  174 (332)
                             .+.+..-.++.++.-...+-+.++..++-
T Consensus       147 -------~~~~~~~~Y~asKaa~~~l~~~la~e~~~  175 (281)
T 3zv4_A          147 -------YPNGGGPLYTATKHAVVGLVRQMAFELAP  175 (281)
T ss_dssp             -------SSSSSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -------cCCCCCchhHHHHHHHHHHHHHHHHHhcC
Confidence                   11222223455555556777788888763

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.88  E-value=0.00013  Score=64.42  Aligned_cols=155  Identities=11%  Similarity=0.083  Sum_probs=86.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhh-hhhhHHHHhhh-hcC---CccceEeeCChhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA-LNGVKMELVDA-AFP---LLKGVVATTDAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~-l~~~~~dl~~~-~~~---~~~~~~~~~~~~~a   78 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +. ++....++... ...   ...++....+..++
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   73 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-------DIVLNGFGD--AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGL   73 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEECCSC--HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-------EEEEEeCCc--chHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHH
Confidence            456899999999999999999998874       799999875  22 33223333221 000   00010000011122


Q ss_pred             -------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           79 -------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        79 -------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                             +...|++|+.||.....   ..+   .+..+..|+.    .++.+.+.+++..  .++||++|.....     
T Consensus        74 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~-----  146 (260)
T 1x1t_A           74 VDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG--FGRIINIASAHGL-----  146 (260)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT-----
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEECcHHhC-----
Confidence                   23789999999975421   122   2345566665    4555555555543  3577788754321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.+....++.++.-...+-+.++..+.  +..|+
T Consensus       147 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  179 (260)
T 1x1t_A          147 ----VASANKSAYVAAKHGVVGFTKVTALETA--GQGIT  179 (260)
T ss_dssp             ----SCCTTCHHHHHHHHHHHHHHHHHHHHHT--TTTEE
T ss_pred             ----cCCCCCchHHHHHHHHHHHHHHHHHHhc--cCCEE
Confidence                1222222345555555566677777764  34565

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.88  E-value=3.7e-05  Score=69.57  Aligned_cols=68  Identities=13%  Similarity=0.240  Sum_probs=47.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      |+ +++||+||| +|.+|..++..|...+.       ++.++|+++  ++++    .+.+.      .+....+..++++
T Consensus         1 M~-~~~~i~iiG-~G~~G~~~a~~l~~~g~-------~V~~~~~~~--~~~~----~~~~~------g~~~~~~~~~~~~   59 (301)
T 3cky_A            1 ME-KSIKIGFIG-LGAMGKPMAINLLKEGV-------TVYAFDLME--ANVA----AVVAQ------GAQACENNQKVAA   59 (301)
T ss_dssp             ----CCEEEEEC-CCTTHHHHHHHHHHTTC-------EEEEECSSH--HHHH----HHHTT------TCEECSSHHHHHH
T ss_pred             CC-CCCEEEEEC-ccHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHH----HHHHC------CCeecCCHHHHHh
Confidence            54 457999999 79999999999987653       789999874  3332    12211      2334456778888


Q ss_pred             CCcEEEEeC
Q 020022           81 GVNIAVMVG   89 (332)
Q Consensus        81 ~aDiVi~~a   89 (332)
                      ++|+||++.
T Consensus        60 ~~D~vi~~v   68 (301)
T 3cky_A           60 ASDIIFTSL   68 (301)
T ss_dssp             HCSEEEECC
T ss_pred             CCCEEEEEC
Confidence            999999984

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.88  E-value=3.5e-05  Score=68.80  Aligned_cols=156  Identities=10%  Similarity=0.044  Sum_probs=86.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeC-CCchhhhhhhHHHHhhh-hcC---CccceEee----CCh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI-PPAAEALNGVKMELVDA-AFP---LLKGVVAT----TDA   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~-~~~~~~l~~~~~dl~~~-~~~---~~~~~~~~----~~~   75 (332)
                      .+++.|+||+|++|.+++..|+..|.       +|++.|+ ++  +.++....++... ...   ...++...    .+.
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQGF-------RVVVHYRHSE--GAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCC   81 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSCH--HHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCCh--HHHHHHHHHHHHhcCCceEEEeccCCCccccHHHH
Confidence            36899999999999999999998873       7999998 53  3443333333221 100   00011111    111


Q ss_pred             hhh-------cCCCcEEEEeCCCCCCC---CCC--------------HHHHHHhhHHHHHHHHHHHHhhcC-CC------
Q 020022           76 VEA-------CTGVNIAVMVGGFPRKE---GME--------------RKDVMSKNVSIYKAQASALEQHAA-PN------  124 (332)
Q Consensus        76 ~~a-------l~~aDiVi~~ag~~~~~---~~~--------------r~~~~~~n~~i~~~i~~~i~~~~~-~~------  124 (332)
                      .++       +...|++|+.||.....   ..+              ....+..|+.....+.+.+..+.. +.      
T Consensus        82 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  161 (276)
T 1mxh_A           82 EDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRN  161 (276)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            122       23789999999975321   111              234567777766666666655421 12      


Q ss_pred             eEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          125 CKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       125 ~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..||++|.....         .+.+....++.++.....+-+.++..+.  +..|+
T Consensus       162 g~iv~isS~~~~---------~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~gi~  206 (276)
T 1mxh_A          162 LSVVNLCDAMTD---------LPLPGFCVYTMAKHALGGLTRAAALELA--PRHIR  206 (276)
T ss_dssp             EEEEEECCGGGG---------SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             cEEEEECchhhc---------CCCCCCeehHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence            577777754331         1222222345555555566666777663  33454

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.88  E-value=2.1e-05  Score=70.33  Aligned_cols=152  Identities=14%  Similarity=0.144  Sum_probs=78.2

Q ss_pred             CC-CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eC-----
Q 020022            1 MA-KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TT-----   73 (332)
Q Consensus         1 m~-~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~-----   73 (332)
                      |. ++.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++..... ...++.. ..     
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~   70 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGA-------KVTITGRHA--ERLEETRQQILAAGV-SEQNVNSVVADVTTD   70 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTC-CGGGEEEEECCTTSH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhccc-CCCceeEEecccCCH
Confidence            54 3457899999999999999999998773       799999874  344333333311000 0011111 11     


Q ss_pred             -ChhhhcC-------CCcEEEEeCCCCCCC---CC----CH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCc
Q 020022           74 -DAVEACT-------GVNIAVMVGGFPRKE---GM----ER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANP  133 (332)
Q Consensus        74 -~~~~al~-------~aDiVi~~ag~~~~~---~~----~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP  133 (332)
                       +..++++       +.|++|+.||.....   ..    +.   ...+..|+.....+.+.+..+.  .+ ..||++|..
T Consensus        71 ~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~  149 (278)
T 1spx_A           71 AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSI  149 (278)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecc
Confidence             1223333       899999999975321   11    32   2345666654444444333321  12 467777653


Q ss_pred             cc-chHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHc
Q 020022          134 AN-TNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       134 ~~-~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                      .. .         .+.|....++.++.....+-+.++..+
T Consensus       150 ~~~~---------~~~~~~~~Y~~sK~a~~~~~~~la~e~  180 (278)
T 1spx_A          150 ASGL---------HATPDFPYYSIAKAAIDQYTRNTAIDL  180 (278)
T ss_dssp             TSSS---------SCCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccc---------cCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence            32 1         112222234445555556666666665

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.88  E-value=3.8e-05  Score=67.98  Aligned_cols=153  Identities=16%  Similarity=0.162  Sum_probs=84.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhhc-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEAC-   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~al-   79 (332)
                      .++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++.... ....-+... ++   ..+++ 
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~   83 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQDGA-------HVVVSSRKQ--ENVDRTVATLQGEG-LSVTGTVCHVGKAEDRERLVA   83 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHH
Confidence            36899999999999999999998874       799999874  33433333332211 000001110 11   11222 


Q ss_pred             ------CCCcEEEEeCCCCCCC----CCC---HHHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           80 ------TGVNIAVMVGGFPRKE----GME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        80 ------~~aDiVi~~ag~~~~~----~~~---r~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                            .+.|++|+.||.....    ..+   ....+..|+...    +.+.+.+++..  ...||++|.....      
T Consensus        84 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------  155 (260)
T 2zat_A           84 MAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG--GGSVLIVSSVGAY------  155 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEEECCGGGT------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CCEEEEEechhhc------
Confidence                  3799999999975311    122   234556666554    44444444433  3567777753321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+....++.++.....+-+.+++.+.  +..|+
T Consensus       156 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  188 (260)
T 2zat_A          156 ---HPFPNLGPYNVSKTALLGLTKNLAVELA--PRNIR  188 (260)
T ss_dssp             ---SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence               1223222345555555566677777664  34565

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.88  E-value=0.00021  Score=63.77  Aligned_cols=154  Identities=16%  Similarity=0.184  Sum_probs=84.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++..... ...-+... ++   ..++ 
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~   89 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-------RVYTCSRNE--KELDECLEIWREKGL-NVEGSVCDLLSRTERDKLM   89 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHH
Confidence            346899999999999999999998874       799999874  334333333322110 00001110 11   1112 


Q ss_pred             ------c-CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           79 ------C-TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        79 ------l-~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                            + ...|++|+.||.....   ..+.   ...+..|+...    +.+.+.+++..  ...||++|.....     
T Consensus        90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--~g~iv~isS~~~~-----  162 (273)
T 1ae1_A           90 QTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ--NGNVIFLSSIAGF-----  162 (273)
T ss_dssp             HHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--SEEEEEECCGGGT-----
T ss_pred             HHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEEcCHhhc-----
Confidence                  2 5789999999975322   1232   33445565544    44444444443  3677788754331     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.|....++.++.-...+-+.++..+.  +..|+
T Consensus       163 ----~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  195 (273)
T 1ae1_A          163 ----SALPSVSLYSASKGAINQMTKSLACEWA--KDNIR  195 (273)
T ss_dssp             ----SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ----CCCCCcchhHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence                1223222345555555566666776663  34454

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.88  E-value=3.6e-05  Score=67.18  Aligned_cols=152  Identities=16%  Similarity=0.197  Sum_probs=83.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccc-eEee-CC---hhhh-
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKG-VVAT-TD---AVEA-   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~-~~~~-~~---~~~a-   78 (332)
                      ++|.|+||+|++|.+++..|+..|.       ++++. ++++  +.++....++...... ... +... ++   ..++ 
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~-------~v~~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~   71 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGF-------ALAIHYGQNR--EKAEEVAEEARRRGSP-LVAVLGANLLEAEAATALV   71 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC-------EEEEEESSCH--HHHHHHHHHHHHTTCS-CEEEEECCTTSHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcCCc-eEEEEeccCCCHHHHHHHH
Confidence            4799999999999999999998763       67776 7663  3333222233221100 001 1111 11   1122 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                            +.+.|+||+.||.....   ..+   ....+..|+..    .+.+.+.+.+..  ..+||++|.....      
T Consensus        72 ~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--~~~iv~~sS~~~~------  143 (245)
T 2ph3_A           72 HQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR--FGRIVNITSVVGI------  143 (245)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCTHHH------
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC--CCEEEEEeChhhc------
Confidence                  34789999999976421   122   23455667666    666666666653  3577777754321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .  +.+....++.++.....+.+.+++.+.  +..++
T Consensus       144 -~--~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  176 (245)
T 2ph3_A          144 -L--GNPGQANYVASKAGLIGFTRAVAKEYA--QRGIT  176 (245)
T ss_dssp             -H--CCSSBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -c--CCCCCcchHHHHHHHHHHHHHHHHHHH--HcCeE
Confidence             1  122222344445444556666666653  23454

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.88  E-value=0.00011  Score=66.21  Aligned_cols=156  Identities=18%  Similarity=0.184  Sum_probs=88.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV---   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~---   76 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       .|++.|++.  +.++....++...... ..-+... ++   ..   
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~Dv~d~~~v~~~~   96 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-------TVGALGRTR--TEVEEVADEIVGAGGQ-AIALEADVSDELQMRNAV   96 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHTTTTCC-EEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-EEEEEccCCCHHHHHHHH
Confidence            446899999999999999999999874       799999874  4444333444321100 0001110 11   11   


Q ss_pred             ----hhcCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           77 ----EACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        77 ----~al~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                          +.+...|++|+.||....  +  ..+.   +..+..|+..    ++.+.+.+++..  .+.||++|.-....    
T Consensus        97 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~g~Iv~isS~~~~~----  170 (283)
T 3v8b_A           97 RDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG--GGAIVVVSSINGTR----  170 (283)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCSBTTT----
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CceEEEEcChhhcc----
Confidence                223478999999997532  1  2232   3445666644    444455556553  36777777533210    


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        . .+.|....++.++.-...+-+.+|..++  +..|+
T Consensus       171 --~-~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  204 (283)
T 3v8b_A          171 --T-FTTPGATAYTATKAAQVAIVQQLALELG--KHHIR  204 (283)
T ss_dssp             --B-CCSTTCHHHHHHHHHHHHHHHHHHHHTT--TTTEE
T ss_pred             --C-CCCCCchHHHHHHHHHHHHHHHHHHHhC--ccCcE
Confidence              0 0112222355555555677778888775  45665

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.87  E-value=7.7e-06  Score=69.57  Aligned_cols=143  Identities=14%  Similarity=0.121  Sum_probs=82.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC---CC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---GV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~---~a   82 (332)
                      ++|.|+||+|++|++++..|+..         +|.++|+++  +.++....++..  .....++....+..++++   +.
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~---------~V~~~~r~~--~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH---------DLLLSGRRA--GALAELAREVGA--RALPADLADELEAKALLEEAGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS---------EEEEECSCH--HHHHHHHHHHTC--EECCCCTTSHHHHHHHHHHHCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC---------CEEEEECCH--HHHHHHHHhccC--cEEEeeCCCHHHHHHHHHhcCCC
Confidence            47999999999999999998753         588899874  333322222211  000001111112334444   89


Q ss_pred             cEEEEeCCCCCCC------CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEe
Q 020022           83 NIAVMVGGFPRKE------GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL  156 (332)
Q Consensus        83 DiVi~~ag~~~~~------~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~  156 (332)
                      |+||++||.....      ..+....+..|+.....+.+.+.+..  ..++|++|.....       .  +.++...++.
T Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~sS~~~~-------~--~~~~~~~Y~~  136 (207)
T 2yut_A           68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK--GARAVFFGAYPRY-------V--QVPGFAAYAA  136 (207)
T ss_dssp             EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE--EEEEEEECCCHHH-------H--SSTTBHHHHH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC--CcEEEEEcChhhc-------c--CCCCcchHHH
Confidence            9999999975321      12345567889888888888774432  3567777754221       1  1222223455


Q ss_pred             chHHHHHHHHHHHHHc
Q 020022          157 TRLDHNRALGQISEKL  172 (332)
Q Consensus       157 t~lds~r~~~~la~~l  172 (332)
                      ++.....+.+.+++.+
T Consensus       137 sK~a~~~~~~~~~~~~  152 (207)
T 2yut_A          137 AKGALEAYLEAARKEL  152 (207)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            5555556666666665

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.87  E-value=1.3e-05  Score=61.61  Aligned_cols=74  Identities=16%  Similarity=0.162  Sum_probs=47.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~a   82 (332)
                      +++||+|+|+ |++|+.++..|...|.      .++.++|+++  ++++.    +.+... ....++....+..++++++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~------~~v~~~~r~~--~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~   70 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSN------YSVTVADHDL--AALAV----LNRMGVATKQVDAKDEAGLAKALGGF   70 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSS------EEEEEEESCH--HHHHH----HHTTTCEEEECCTTCHHHHHHHTTTC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCC------ceEEEEeCCH--HHHHH----HHhCCCcEEEecCCCHHHHHHHHcCC
Confidence            4579999996 9999999999998762      1799999874  33321    111110 0000111112345678899


Q ss_pred             cEEEEeCC
Q 020022           83 NIAVMVGG   90 (332)
Q Consensus        83 DiVi~~ag   90 (332)
                      |+||++++
T Consensus        71 d~vi~~~~   78 (118)
T 3ic5_A           71 DAVISAAP   78 (118)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999985

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.87  E-value=5.3e-05  Score=67.90  Aligned_cols=159  Identities=14%  Similarity=0.092  Sum_probs=88.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc----------hhhhhhhHHHHhhhhcCCccceEee-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA----------AEALNGVKMELVDAAFPLLKGVVAT-   72 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~----------~~~l~~~~~dl~~~~~~~~~~~~~~-   72 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       +|+++|++.+          .+.++....++.... ....-+... 
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~   80 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-------DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDV   80 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCT
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-------eEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccC
Confidence            346899999999999999999999874       7999998621          122222222222211 000001110 


Q ss_pred             CC---hhhh-------cCCCcEEEEeCCCCCCC-CC---CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           73 TD---AVEA-------CTGVNIAVMVGGFPRKE-GM---ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        73 ~~---~~~a-------l~~aDiVi~~ag~~~~~-~~---~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                      ++   ..++       +...|++|+.||..... ..   .....+..|+.-...+.+.+..+-.+.+.||++|.-.....
T Consensus        81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~  160 (287)
T 3pxx_A           81 RDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIA  160 (287)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccc
Confidence            11   1122       23789999999975422 12   23456788888888888877776444567777775332211


Q ss_pred             HHHHHhCCCC-----CCCcEEEechHHHHHHHHHHHHHcC
Q 020022          139 LILKEFAPSI-----PAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       139 ~~~~~~~~~~-----~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                         ....+..     +....++.++.-...+-+.+++.++
T Consensus       161 ---~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~  197 (287)
T 3pxx_A          161 ---AAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLA  197 (287)
T ss_dssp             ---HHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---ccccccccccCCCccchHHHHHHHHHHHHHHHHHHHh
Confidence               1000000     0001234455555566677777764

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.87  E-value=3.4e-05  Score=69.74  Aligned_cols=66  Identities=18%  Similarity=0.276  Sum_probs=47.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      +|||+||| +|.+|..++..|...+.       ++.++|+++  ++++.    +...      .+....+..++++++|+
T Consensus         5 ~m~i~iiG-~G~~G~~~a~~l~~~g~-------~V~~~~~~~--~~~~~----~~~~------g~~~~~~~~~~~~~~D~   64 (299)
T 1vpd_A            5 TMKVGFIG-LGIMGKPMSKNLLKAGY-------SLVVSDRNP--EAIAD----VIAA------GAETASTAKAIAEQCDV   64 (299)
T ss_dssp             -CEEEEEC-CSTTHHHHHHHHHHTTC-------EEEEECSCH--HHHHH----HHHT------TCEECSSHHHHHHHCSE
T ss_pred             cceEEEEC-chHHHHHHHHHHHhCCC-------EEEEEeCCH--HHHHH----HHHC------CCeecCCHHHHHhCCCE
Confidence            36999999 79999999999987653       799999874  33321    2211      22345567788899999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      ||++..
T Consensus        65 vi~~v~   70 (299)
T 1vpd_A           65 IITMLP   70 (299)
T ss_dssp             EEECCS
T ss_pred             EEEECC
Confidence            999853

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.87  E-value=3.6e-05  Score=68.73  Aligned_cols=119  Identities=21%  Similarity=0.182  Sum_probs=68.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|+++|+++  +.++....++...... ..-+... ++   ..++ 
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v~~~~   99 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-------KLVLWDINK--HGLEETAAKCKGLGAK-VHTFVVDCSNREDIYSSA   99 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCC-EEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEEcCH--HHHHHHHHHHHhcCCe-EEEEEeeCCCHHHHHHHH
Confidence            457899999999999999999998763       799999874  3333333333221100 0001110 11   1122 


Q ss_pred             ------cCCCcEEEEeCCCCCCCC---C---CHHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           79 ------CTGVNIAVMVGGFPRKEG---M---ERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~~---~---~r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                            +.+.|+||+.||......   .   +....+..|+..    ++.+.+.+.+..  ...||++|...
T Consensus       100 ~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~~iv~isS~~  169 (272)
T 1yb1_A          100 KKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN--HGHIVTVASAA  169 (272)
T ss_dssp             HHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEEECCCC
T ss_pred             HHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCEEEEEechh
Confidence                  237899999999764221   1   122455666655    444555554433  35777777543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.86  E-value=5.1e-05  Score=66.64  Aligned_cols=155  Identities=15%  Similarity=0.148  Sum_probs=86.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~al   79 (332)
                      +.+++.|+||+|++|.+++..|+..|.       ++.+.|... .+.++....++...... ..-+... ++   ..+++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-------~V~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~   73 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-------NVAVNYAGS-KEKAEAVVEEIKAKGVD-SFAIQANVADADEVKAMI   73 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHTTSC-EEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcCCc-EEEEEccCCCHHHHHHHH
Confidence            346899999999999999999999874       688888753 23444333333322100 0001110 11   12222


Q ss_pred             -------CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHH----HHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           80 -------TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYK----AQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        80 -------~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~----~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                             ...|++|+.||.....   ..+.   +..+..|+....    .+.+.+.+..  .+.||++|.-..       
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~-------  144 (246)
T 3osu_A           74 KEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR--SGAIINLSSVVG-------  144 (246)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCHHH-------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CCEEEEEcchhh-------
Confidence                   3789999999976422   1232   345666765444    4444445543  357777775221       


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..  +.|....++.++.....+-+.+++.+.  +..|+
T Consensus       145 ~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  178 (246)
T 3osu_A          145 AV--GNPGQANYVATKAGVIGLTKSAARELA--SRGIT  178 (246)
T ss_dssp             HH--CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             cC--CCCCChHHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence            11  223223456666655667777777664  34565

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.86  E-value=7.2e-05  Score=66.99  Aligned_cols=156  Identities=15%  Similarity=0.111  Sum_probs=85.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc----------hhhhhhhHHHHhhhhcCCccceEee-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA----------AEALNGVKMELVDAAFPLLKGVVAT-   72 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~----------~~~l~~~~~dl~~~~~~~~~~~~~~-   72 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++.          .+.+......+.... ....-+... 
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv   80 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-------DIAICDRCENSDVVGYPLATADDLAETVALVEKTG-RRCISAKVDV   80 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-CCEEEEECCT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCccccccccccccHHHHHHHHHHHHhcC-CeEEEEeCCC
Confidence            347899999999999999999999874       7999998632          112221212222111 000000110 


Q ss_pred             CC---hhhh-------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecC
Q 020022           73 TD---AVEA-------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        73 ~~---~~~a-------l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ++   ..++       +...|++|+.||.....   ..+.   +..+..|+.-.    +.+.+.+.+..  .+.||++|.
T Consensus        81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS  158 (281)
T 3s55_A           81 KDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN--YGRIVTVSS  158 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CCEEEEECC
Confidence            11   1122       33789999999975421   2233   34456676544    44444455543  367888875


Q ss_pred             cccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          133 PANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       133 P~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ....         .+.+....++.++.-...+-+.++..++  +..|+
T Consensus       159 ~~~~---------~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  195 (281)
T 3s55_A          159 MLGH---------SANFAQASYVSSKWGVIGLTKCAAHDLV--GYGIT  195 (281)
T ss_dssp             GGGG---------SCCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEE
T ss_pred             hhhc---------CCCCCCchhHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence            4321         1223222345555555667777777764  34555

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.86  E-value=0.00015  Score=65.51  Aligned_cols=151  Identities=15%  Similarity=0.024  Sum_probs=86.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE---   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~---   77 (332)
                      .++|.|+||+|.+|.+++..|+..|.       +|++.|+++. ...+.....+.... ....-+... ++   ..+   
T Consensus        47 gk~vlVTGas~GIG~aia~~la~~G~-------~V~~~~r~~~-~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~  117 (291)
T 3ijr_A           47 GKNVLITGGDSGIGRAVSIAFAKEGA-------NIAIAYLDEE-GDANETKQYVEKEG-VKCVLLPGDLSDEQHCKDIVQ  117 (291)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCH-HHHHHHHHHHHTTT-CCEEEEESCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCch-HHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHH
Confidence            36899999999999999999999874       7899998752 22221111121111 000001110 11   112   


Q ss_pred             ----hcCCCcEEEEeCCCCCCCC----CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           78 ----ACTGVNIAVMVGGFPRKEG----ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~~----~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                          .+...|++|+.||......    .+   .+..+..|+.....+.+.+..+-.+...||++|.-...       .  
T Consensus       118 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-------~--  188 (291)
T 3ijr_A          118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAY-------E--  188 (291)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHH-------H--
T ss_pred             HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhc-------C--
Confidence                2237899999998753221    23   34567788888878888777654344567777653221       1  


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      +.+..-.++.++.-...+-+.++..+.
T Consensus       189 ~~~~~~~Y~asKaa~~~l~~~la~e~~  215 (291)
T 3ijr_A          189 GNETLIDYSATKGAIVAFTRSLSQSLV  215 (291)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHh
Confidence            122222345555555667777777764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.86  E-value=1.9e-05  Score=68.99  Aligned_cols=38  Identities=26%  Similarity=0.293  Sum_probs=31.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +.++|.|+||+|++|.+++..|+..|-.     .+|+++|++.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~-----~~V~~~~r~~   39 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNI-----RHIIATARDV   39 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTC-----CEEEEEESSG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCC-----cEEEEEecCH
Confidence            4468999999999999999999987610     1789999874

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=97.85  E-value=1.2e-05  Score=78.52  Aligned_cols=173  Identities=12%  Similarity=0.013  Sum_probs=92.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh-hhhhhHHHHhhh-----hcCCccceEe-eCChhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-ALNGVKMELVDA-----AFPLLKGVVA-TTDAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-~l~~~~~dl~~~-----~~~~~~~~~~-~~~~~~   77 (332)
                      +++|.|+||+|++|++++..|...+.       +|+++++++... ........+...     ......++.. ..|+.+
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d  222 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSH-------RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFEC  222 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEE-------EEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTB
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCC-------EEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcc
Confidence            57999999999999999999965542       788888875321 111111111111     0000112211 111111


Q ss_pred             -----hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc-ccch-H-----HHHHHhC
Q 020022           78 -----ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP-ANTN-A-----LILKEFA  145 (332)
Q Consensus        78 -----al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP-~~~~-~-----~~~~~~~  145 (332)
                           +..++|+||++|+... ...+..++...|+...+++++.+.+ . . .+++++|.- +... .     ..+.+..
T Consensus       223 ~~~l~~~~~~D~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~-~~~v~iSS~~vG~~~~~~~~~~~~~E~~  298 (508)
T 4f6l_B          223 MDDVVLPENMDTIIHAGARTD-HFGDDDEFEKVNVQGTVDVIRLAQQ-H-H-ARLIYVSTISVGTYFDIDTEDVTFSEAD  298 (508)
T ss_dssp             CSSCCCSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT-T-T-CEEEEEEESCTTSEECTTCSCCEECTTC
T ss_pred             cccCCCccCCCEEEECCceec-CCCCHHHHhhhHHHHHHHHHHHHHh-C-C-CcEEEeCChhhccCCccCCcCccccccc
Confidence                 5679999999998753 2233455677899999999999887 3 2 356665532 2000 0     0000000


Q ss_pred             C--CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          146 P--SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       146 ~--~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      .  +..+...++.++....++....++ .|++..-++...|+|...
T Consensus       299 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~  343 (508)
T 4f6l_B          299 VYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYN  343 (508)
T ss_dssp             SCSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSS
T ss_pred             ccccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCC
Confidence            0  001223456667776676666554 577777777666677543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.85  E-value=1.4e-05  Score=72.30  Aligned_cols=150  Identities=16%  Similarity=0.095  Sum_probs=82.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEe-eCC------hh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVA-TTD------AV   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~-~~~------~~   76 (332)
                      .++|.|+||+|++|++++..|+..|.       +|+++|++.  +.++....++...... ...++.. ..|      ..
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~   88 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLELGS-------NVVIASRKL--ERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN   88 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHH
Confidence            46899999999999999999998763       799999874  3444333344321000 0111111 111      12


Q ss_pred             hhc-------CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHH
Q 020022           77 EAC-------TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALIL  141 (332)
Q Consensus        77 ~al-------~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~  141 (332)
                      +++       ...|+||++||.....   ..+.   ...+..|+.....+.+.+....  .....+|+++... .     
T Consensus        89 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~-----  162 (303)
T 1yxm_A           89 NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-K-----  162 (303)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-T-----
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-c-----
Confidence            222       3589999999964321   1232   3446777776666666544310  0135677776543 1     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                          .+.|....++.+......+.+.+++.+.
T Consensus       163 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~  190 (303)
T 1yxm_A          163 ----AGFPLAVHSGAARAGVYNLTKSLALEWA  190 (303)
T ss_dssp             ----TCCTTCHHHHHHHHHHHHHHHHHHHHTG
T ss_pred             ----cCCCcchhhHHHHHHHHHHHHHHHHHhc
Confidence                1222222233344444456666666653

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.85  E-value=5.9e-05  Score=66.21  Aligned_cols=153  Identities=15%  Similarity=0.134  Sum_probs=82.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC---ChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT---DAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~---~~~~al~   80 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++... ++..... ...++....   ...+.+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~-~~~~~~~-~~~D~~~~~~~~~~~~~~~   73 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-------KVIATDINE--SKLQELE-KYPGIQT-RVLDVTKKKQIDQFANEVE   73 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHGGGG-GSTTEEE-EECCTTCHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHH-hccCceE-EEeeCCCHHHHHHHHHHhC
Confidence            457899999999999999999998873       799999874  3333221 2211000 000000000   1112356


Q ss_pred             CCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCC-
Q 020022           81 GVNIAVMVGGFPRKE---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIP-  149 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~-  149 (332)
                      ..|++|+.||.....   ..+.   ...+..|+...    +.+.+.+.+..  ...||++|.....         .+.| 
T Consensus        74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~---------~~~~~  142 (246)
T 2ag5_A           74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK--SGNIINMSSVASS---------VKGVV  142 (246)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCSBTT---------TBCCT
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CceEEEEechHhC---------cCCCC
Confidence            789999999975421   1222   23455666544    44444444443  3577777754321         1112 


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          150 AKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ....++.++.....+-+.+++.+.  +..|+
T Consensus       143 ~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  171 (246)
T 2ag5_A          143 NRCVYSTTKAAVIGLTKSVAADFI--QQGIR  171 (246)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence            112344455555566666776653  34454

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.85  E-value=1.8e-05  Score=71.62  Aligned_cols=103  Identities=16%  Similarity=0.117  Sum_probs=61.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch---hhhhhhHHHHhhhhc-CCccceEeeCChh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA---EALNGVKMELVDAAF-PLLKGVVATTDAV   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~---~~l~~~~~dl~~~~~-~~~~~~~~~~~~~   76 (332)
                      |+. ++||+|+||+|++|++++..|+..|.       +|++++++...   ++.+ ....+..... ....++.-...+.
T Consensus         1 M~~-~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~l~   71 (313)
T 1qyd_A            1 MDK-KSRVLIVGGTGYIGKRIVNASISLGH-------PTYVLFRPEVVSNIDKVQ-MLLYFKQLGAKLIEASLDDHQRLV   71 (313)
T ss_dssp             -CC-CCCEEEESTTSTTHHHHHHHHHHTTC-------CEEEECCSCCSSCHHHHH-HHHHHHTTTCEEECCCSSCHHHHH
T ss_pred             CCC-CCEEEEEcCCcHHHHHHHHHHHhCCC-------cEEEEECCCcccchhHHH-HHHHHHhCCeEEEeCCCCCHHHHH
Confidence            642 46899999999999999999998762       68888887421   1111 0111111110 0001111112356


Q ss_pred             hhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022           77 EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA  121 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~  121 (332)
                      ++++++|+||++++.....         .|....+.+++.+++.+
T Consensus        72 ~~~~~~d~vi~~a~~~~~~---------~~~~~~~~l~~aa~~~g  107 (313)
T 1qyd_A           72 DALKQVDVVISALAGGVLS---------HHILEQLKLVEAIKEAG  107 (313)
T ss_dssp             HHHTTCSEEEECCCCSSSS---------TTTTTHHHHHHHHHHSC
T ss_pred             HHHhCCCEEEECCccccch---------hhHHHHHHHHHHHHhcC
Confidence            7899999999999865321         14445567777777764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.85  E-value=5.7e-05  Score=68.45  Aligned_cols=151  Identities=13%  Similarity=0.144  Sum_probs=81.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeCC------h
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATTD------A   75 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~~------~   75 (332)
                      .+.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++...... ..++. +..|      .
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~~~~Dv~d~~~v   93 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGA-------QVTITGRNE--DRLEETKQQILKAGVP-AEKINAVVADVTEASGQ   93 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCC-GGGEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCC-CceEEEEecCCCCHHHH
Confidence            3457899999999999999999998874       799999874  3443333333221100 00111 1111      1


Q ss_pred             hhh-------cCCCcEEEEeCCCCCCC-----CCC---HHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchH
Q 020022           76 VEA-------CTGVNIAVMVGGFPRKE-----GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNA  138 (332)
Q Consensus        76 ~~a-------l~~aDiVi~~ag~~~~~-----~~~---r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~  138 (332)
                      .++       +...|++|+.||.....     ..+   ....+..|+.....+.+.+..+.  .+ +.||++|.-...  
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~--  170 (297)
T 1xhl_A           94 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAG--  170 (297)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGS--
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhc--
Confidence            122       23789999999975421     122   23455666654444444433321  12 567777653221  


Q ss_pred             HHHHHhCCCC-CCCcEEEechHHHHHHHHHHHHHcC
Q 020022          139 LILKEFAPSI-PAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       139 ~~~~~~~~~~-~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                             .+. |....++.++.....+-+.++..+.
T Consensus       171 -------~~~~~~~~~Y~asKaa~~~l~~~la~el~  199 (297)
T 1xhl_A          171 -------PQAHSGYPYYACAKAALDQYTRCTAIDLI  199 (297)
T ss_dssp             -------SSCCTTSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -------cCCCCCcchHHHHHHHHHHHHHHHHHHhc
Confidence                   111 2222344444444556666666553

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.84  E-value=0.00017  Score=65.19  Aligned_cols=151  Identities=19%  Similarity=0.203  Sum_probs=84.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC--------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD--------   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~--------   74 (332)
                      ..++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++....++.........-+... ++        
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~  110 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-------NVAVAARSP--RELSSVTAELGELGAGNVIGVRLDVSDPGSCADAA  110 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSG--GGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHH
Confidence            346899999999999999999999874       799999884  444434444432210000001111 11        


Q ss_pred             --hhhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHH----HHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           75 --AVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~----i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                        ..+.+...|++|+.||.....   ..+.   ...+..|+.....    +.+.+.+.. . +.||++|.-....     
T Consensus       111 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~-g~iV~isS~~~~~-----  183 (293)
T 3rih_A          111 RTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-R-GRVILTSSITGPV-----  183 (293)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-S-CEEEEECCSBTTT-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C-CEEEEEeChhhcc-----
Confidence              112234679999999975322   2233   3445666654444    444445554 3 5677776533210     


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                         .+.+....++.++.-...+-+.+++.++
T Consensus       184 ---~~~~~~~~Y~asKaa~~~l~~~la~e~~  211 (293)
T 3rih_A          184 ---TGYPGWSHYGASKAAQLGFMRTAAIELA  211 (293)
T ss_dssp             ---BBCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---CCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence               1223222345555555667777777764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.84  E-value=1.7e-05  Score=70.61  Aligned_cols=122  Identities=18%  Similarity=0.159  Sum_probs=70.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh-----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-----   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a-----   78 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........+++...+..++     
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-------SLVAVDREE--RLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEAL   75 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHH
Confidence            457899999999999999999998874       799999874  333322222210000000000000011122     


Q ss_pred             --cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           79 --CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        79 --l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                        +...|++|+.||.....   ..+   .+..+..|+.....+.+.+..+..+.+.||++|...
T Consensus        76 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  139 (263)
T 2a4k_A           76 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  139 (263)
T ss_dssp             HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecch
Confidence              23579999999975421   122   234567788777777776665531135677777543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.84  E-value=9.5e-05  Score=64.49  Aligned_cols=160  Identities=18%  Similarity=0.217  Sum_probs=85.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh--
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA--   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a--   78 (332)
                      .++|.|+||+|++|.+++..|+..|.........|++.++++  +.++....++.... ....-+... ++   ..++  
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA--ADLEKISLECRAEG-ALTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH--HHHHHHHHHHHTTT-CEEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCH--HHHHHHHHHHHccC-CeeeEEEecCCCHHHHHHHHH
Confidence            357999999999999999999987631111112588888873  33433333332111 000000110 11   1122  


Q ss_pred             -----cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHH----HHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           79 -----CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        79 -----l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~----i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                           +.+.|+||+.||.....   ..+   ....+..|+.....+.+.    +.+..  ..+||++|.....       
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~-------  149 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH--SGHIFFITSVAAT-------  149 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT-------
T ss_pred             HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC--CCEEEEEecchhc-------
Confidence                 23799999999976422   122   234456666555444444    44432  3677787754331       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.+....++.++.....+.+.++..+.  +..++
T Consensus       150 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  182 (244)
T 2bd0_A          150 --KAFRHSSIYCMSKFGQRGLVETMRLYAR--KCNVR  182 (244)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHT--TTTEE
T ss_pred             --CCCCCCchhHHHHHHHHHHHHHHHHHhh--ccCcE
Confidence              1223223455555555566666666654  34555

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.84  E-value=1.3e-05  Score=71.09  Aligned_cols=150  Identities=13%  Similarity=0.111  Sum_probs=85.3

Q ss_pred             CCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh
Q 020022            4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE   77 (332)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~   77 (332)
                      +.++|.|+||+  |++|.+++..|+..|.       +|++.|+++  + ++....++.... ....-+... ++   ..+
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-------~V~~~~r~~--~-~~~~~~~l~~~~-~~~~~~~~D~~~~~~v~~   75 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-------EVALSYQAE--R-LRPEAEKLAEAL-GGALLFRADVTQDEELDA   75 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-------EEEEEESCG--G-GHHHHHHHHHHT-TCCEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCCH--H-HHHHHHHHHHhc-CCcEEEECCCCCHHHHHH
Confidence            45689999998  8999999999998874       789999874  2 221222222210 000001111 11   122


Q ss_pred             hc-------CCCcEEEEeCCCCCC-----C--CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           78 AC-------TGVNIAVMVGGFPRK-----E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        78 al-------~~aDiVi~~ag~~~~-----~--~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                      ++       ...|++|+.||....     +  ..+   ....+..|+.....+.+.+..+..+.++||++|.-...    
T Consensus        76 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~----  151 (261)
T 2wyu_A           76 LFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE----  151 (261)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT----
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEeccccc----
Confidence            22       368999999997542     1  123   33456788887777777776553223567777643221    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                           .+.|....++.++.....+-+.+++.+.
T Consensus       152 -----~~~~~~~~Y~asK~a~~~~~~~la~e~~  179 (261)
T 2wyu_A          152 -----KVVPKYNVMAIAKAALEASVRYLAYELG  179 (261)
T ss_dssp             -----SBCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -----CCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence                 1122222345555555566666777663

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.84  E-value=0.0003  Score=63.16  Aligned_cols=158  Identities=15%  Similarity=0.052  Sum_probs=83.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC-------h
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD-------A   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~-------~   75 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++ .+.++....++.........-+... ++       .
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-------~V~~~~r~~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v   93 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-------RVVIHYHNS-AEAAVSLADELNKERSNTAVVCQADLTNSNVLPASC   93 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-------EEEEEESSC-HHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------eEEEEeCCc-hHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHH
Confidence            346899999999999999999998874       799999874 1333333333321100000000010 11       1


Q ss_pred             hh-------hcCCCcEEEEeCCCCCCC--------C-----CC---HHHHHHhhHHHHHHHHHHHHhhcCC--------C
Q 020022           76 VE-------ACTGVNIAVMVGGFPRKE--------G-----ME---RKDVMSKNVSIYKAQASALEQHAAP--------N  124 (332)
Q Consensus        76 ~~-------al~~aDiVi~~ag~~~~~--------~-----~~---r~~~~~~n~~i~~~i~~~i~~~~~~--------~  124 (332)
                      .+       .+...|++|+.||.....        .     .+   ....+..|+.....+.+.+..+..+        .
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~  173 (288)
T 2x9g_A           94 EEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSN  173 (288)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCC
Confidence            11       234789999999975321        1     11   1234556665544444444333211        3


Q ss_pred             eEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          125 CKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       125 ~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.||+++.....         .+.+....++.++.-...+-+.++..+.  +..|+
T Consensus       174 g~iv~isS~~~~---------~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  218 (288)
T 2x9g_A          174 LSIVNLCDAMVD---------QPCMAFSLYNMGKHALVGLTQSAALELA--PYGIR  218 (288)
T ss_dssp             EEEEEECCTTTT---------SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             eEEEEEeccccc---------CCCCCCchHHHHHHHHHHHHHHHHHHhh--ccCeE
Confidence            567777753321         1122222345555544566666777664  34555

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.84  E-value=6.9e-05  Score=67.84  Aligned_cols=154  Identities=10%  Similarity=0.106  Sum_probs=89.2

Q ss_pred             CcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chhhh
Q 020022            5 PVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAVEA   78 (332)
Q Consensus         5 ~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~~a   78 (332)
                      .+++.|+||+|  .+|.+++..|+..|.       +|++.|+++  +..+ ...++.... ....-+... +   +..++
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~~G~-------~V~~~~r~~--~~~~-~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~   98 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCAQGA-------EVALTYLSE--TFKK-RVDPLAESL-GVKLTVPCDVSDAESVDNM   98 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTC-------EEEEEESSG--GGHH-HHHHHHHHH-TCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHHCCC-------EEEEEeCCh--HHHH-HHHHHHHhc-CCeEEEEcCCCCHHHHHHH
Confidence            46899999876  999999999999874       799999874  2221 111121111 000001110 1   11122


Q ss_pred             -------cCCCcEEEEeCCCCCC-----C--CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           79 -------CTGVNIAVMVGGFPRK-----E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        79 -------l~~aDiVi~~ag~~~~-----~--~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                             +...|++|+.||+...     +  ..+   ....+..|+.....+.+.+..+-.+.+.||++|.....     
T Consensus        99 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~-----  173 (296)
T 3k31_A           99 FKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAE-----  173 (296)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT-----
T ss_pred             HHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhc-----
Confidence                   2467999999998642     1  223   33456778887777877777664345677777753321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.+....++.++.--..+-+.+|..++  +..|+
T Consensus       174 ----~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gIr  206 (296)
T 3k31_A          174 ----KVVPHYNVMGVCKAALEASVKYLAVDLG--KQQIR  206 (296)
T ss_dssp             ----SCCTTTTHHHHHHHHHHHHHHHHHHHHH--TTTEE
T ss_pred             ----cCCCCchhhHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence                1223222345555555567777777764  34565

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=97.83  E-value=5.9e-05  Score=64.85  Aligned_cols=76  Identities=18%  Similarity=0.147  Sum_probs=54.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| +|.+|+.++..|...+.       ++.++|+++  +                            ++++||+
T Consensus        19 ~~~I~iiG-~G~mG~~la~~l~~~g~-------~V~~~~~~~--~----------------------------~~~~aD~   60 (209)
T 2raf_A           19 GMEITIFG-KGNMGQAIGHNFEIAGH-------EVTYYGSKD--Q----------------------------ATTLGEI   60 (209)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECTTC--C----------------------------CSSCCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEcCCH--H----------------------------HhccCCE
Confidence            57999999 79999999999988763       799999874  1                            4679999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      ||++.. +               ..++++++.+..+.+ +.+++.++|+.+
T Consensus        61 vi~av~-~---------------~~~~~v~~~l~~~~~-~~~vi~~~~g~~   94 (209)
T 2raf_A           61 VIMAVP-Y---------------PALAALAKQYATQLK-GKIVVDITNPLN   94 (209)
T ss_dssp             EEECSC-H---------------HHHHHHHHHTHHHHT-TSEEEECCCCBC
T ss_pred             EEEcCC-c---------------HHHHHHHHHHHHhcC-CCEEEEECCCCC
Confidence            999853 1               113344444544443 567778899665

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.83  E-value=0.00016  Score=63.76  Aligned_cols=158  Identities=18%  Similarity=0.146  Sum_probs=85.3

Q ss_pred             CCC--CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEee-CC-
Q 020022            1 MAK--EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVAT-TD-   74 (332)
Q Consensus         1 m~~--~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~-~~-   74 (332)
                      |++  +.+++.|+||+|.+|.+++..|+..|.       +|.+.|+++  +.++....++......  ...-+... ++ 
T Consensus         1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   71 (250)
T 3nyw_A            1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGY-------RVVLIARSK--QNLEKVHDEIMRSNKHVQEPIVLPLDITDC   71 (250)
T ss_dssp             ----CCCCEEEEESTTSHHHHHHHHHHHHHTC-------EEEEEESCH--HHHHHHHHHHHHHCTTSCCCEEEECCTTCH
T ss_pred             CcccCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHhccccCcceEEeccCCCH
Confidence            553  457899999999999999999998874       799999874  4444444444322100  00001111 11 


Q ss_pred             --hh-------hhcCCCcEEEEeCCCCCCC--CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           75 --AV-------EACTGVNIAVMVGGFPRKE--GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        75 --~~-------~al~~aDiVi~~ag~~~~~--~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                        ..       +.+...|++|+.||.....  ..+   ....+..|+.    .++.+.+.+++..  .+.||++|.....
T Consensus        72 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~  149 (250)
T 3nyw_A           72 TKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK--NGYIFNVASRAAK  149 (250)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECC----
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEEccHHhc
Confidence              11       1224689999999985322  222   2234555654    4455555555543  3677777754321


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                               .+.++.-.++.++.-...+-+.++..+.  +..|+
T Consensus       150 ---------~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~  182 (250)
T 3nyw_A          150 ---------YGFADGGIYGSTKFALLGLAESLYRELA--PLGIR  182 (250)
T ss_dssp             ------------CCTTHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---------CCCCCCcchHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence                     0112222345555555566677777664  34555

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.83  E-value=0.00038  Score=61.72  Aligned_cols=157  Identities=15%  Similarity=0.108  Sum_probs=86.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEee-CC---h---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVAT-TD---A---   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~-~~---~---   75 (332)
                      ..+++.|+||+|.+|.+++..|+..|.       .|++.|+++  +.++....++....... ...+... ++   .   
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~   77 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-------AVAFCARDG--ERLRAAESALRQRFPGARLFASVCDVLDALQVRAF   77 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHH
Confidence            346899999999999999999999874       799999874  44444444443311000 0001110 11   1   


Q ss_pred             ----hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHHHH
Q 020022           76 ----VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        76 ----~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~~~  143 (332)
                          .+.+...|++|+.||.....   ..+.   ...+..|+.....+.+.+..+-  .+.+.||++|.....       
T Consensus        78 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------  150 (265)
T 3lf2_A           78 AEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLAS-------  150 (265)
T ss_dssp             HHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGT-------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccC-------
Confidence                12234679999999975421   2233   3456677755555544443321  124667777653321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.|....++.++.--..+-+.++..++  +..|+
T Consensus       151 --~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~  183 (265)
T 3lf2_A          151 --QPEPHMVATSAARAGVKNLVRSMAFEFA--PKGVR  183 (265)
T ss_dssp             --SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             --CCCCCchhhHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence              1222222344444444566667777664  34555

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.83  E-value=5.3e-05  Score=67.79  Aligned_cols=154  Identities=16%  Similarity=0.131  Sum_probs=83.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hc-CCccceEeeCChhhhc----
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AF-PLLKGVVATTDAVEAC----   79 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~-~~~~~~~~~~~~~~al----   79 (332)
                      +++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++... .. ....++....+..+++    
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   92 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-------SLVLTGRRE--ERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLP   92 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            6899999999999999999998874       799999874  3443333333211 00 0000000000112222    


Q ss_pred             ---CCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           80 ---TGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        80 ---~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                         ...|++|+.||....  +  ..+.   +..+..|+..    ++.+.+.+.+.. ....||++|.-...         
T Consensus        93 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~---------  162 (272)
T 2nwq_A           93 EEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGK---------  162 (272)
T ss_dssp             GGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGT---------
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhc---------
Confidence               345999999997542  1  1222   3345666654    555666665554 22267777754321         


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .+.|....++.++.....+-+.++..+.  +..|+
T Consensus       163 ~~~~~~~~Y~asKaa~~~l~~~la~el~--~~gIr  195 (272)
T 2nwq_A          163 WPYPGSHVYGGTKAFVEQFSLNLRCDLQ--GTGVR  195 (272)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHTTCT--TSCCE
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence            1222222344444444556666666543  44565

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.83  E-value=1.9e-05  Score=70.55  Aligned_cols=101  Identities=12%  Similarity=0.129  Sum_probs=60.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhc--ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhcCCCc
Q 020022            7 RVLVTGAAGQIGYALVPMIARG--VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~--~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al~~aD   83 (332)
                      ||.|+||+|++|++++..|+..  +.       +|+++++++  +...    ++.+.... ...++.-.....++++++|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~~--~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-------QIVAIVRNP--AKAQ----ALAAQGITVRQADYGDEAALTSALQGVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-------GEEEEESCT--TTCH----HHHHTTCEEEECCTTCHHHHHHHTTTCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-------eEEEEEcCh--Hhhh----hhhcCCCeEEEcCCCCHHHHHHHHhCCC
Confidence            5899999999999999999876  53       688888874  2222    11111000 0001111123457889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +||++++...          ..|+...+.+++.+.+...  .++|++|.
T Consensus        68 ~vi~~a~~~~----------~~~~~~~~~l~~a~~~~~~--~~~v~~Ss  104 (286)
T 2zcu_A           68 KLLLISSSEV----------GQRAPQHRNVINAAKAAGV--KFIAYTSL  104 (286)
T ss_dssp             EEEECC------------------CHHHHHHHHHHHHTC--CEEEEEEE
T ss_pred             EEEEeCCCCc----------hHHHHHHHHHHHHHHHcCC--CEEEEECC
Confidence            9999988531          1366777888888887653  35666653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.82  E-value=7.3e-05  Score=66.41  Aligned_cols=158  Identities=13%  Similarity=0.078  Sum_probs=87.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC-chhhhhhhHHHHhhhhcC---CccceEeeCChhhh--
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~a--   78 (332)
                      .+++.|+||+|.+|.+++..|+..|.       ++++.++.. +.+.++....++......   ...+++...+..++  
T Consensus        11 ~k~vlVTGas~GIG~aia~~la~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   83 (262)
T 3ksu_A           11 NKVIVIAGGIKNLGALTAKTFALESV-------NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFD   83 (262)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHTTSSC-------EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            36899999999999999999998874       688887642 123333333333321100   00011111111122  


Q ss_pred             -----cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           79 -----CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        79 -----l~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                           +...|++|+.||......   .+   .+..+..|+.....+.+.+..+-.+.+.+|+++.....   .  ..   
T Consensus        84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~---~--~~---  155 (262)
T 3ksu_A           84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLA---A--YT---  155 (262)
T ss_dssp             HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHH---H--HH---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhc---c--CC---
Confidence                 237899999999764321   23   23456778877777777766553234677777754321   1  11   


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       +....++.++.-...+-+.++..++-  ..|+
T Consensus       156 -~~~~~Y~asKaa~~~l~~~la~e~~~--~gi~  185 (262)
T 3ksu_A          156 -GFYSTYAGNKAPVEHYTRAASKELMK--QQIS  185 (262)
T ss_dssp             -CCCCC-----CHHHHHHHHHHHHTTT--TTCE
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHH--cCcE
Confidence             21224566666666788888888753  4454

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.82  E-value=6.7e-05  Score=66.91  Aligned_cols=156  Identities=17%  Similarity=0.119  Sum_probs=88.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE---   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~---   77 (332)
                      .+++.|+||+|.+|.+++..|+..|.       .+++.+... .+.++....++..... ....+... ++   ..+   
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~G~-------~Vv~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~   97 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASDGF-------TVVINYAGK-AAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFA   97 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHTC-------EEEEEESSC-SHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEcCCC-HHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHH
Confidence            46799999999999999999999874       677765442 2333333333322110 00001110 11   112   


Q ss_pred             ----hcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           78 ----ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                          .+...|++|+.||......   .+   .+..+..|+.....+.+.+...-.+.+.||++|....       ..  +
T Consensus        98 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~-------~~--~  168 (267)
T 3u5t_A           98 TAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQV-------GL--L  168 (267)
T ss_dssp             HHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHH-------HH--C
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhh-------cc--C
Confidence                2237899999999754221   22   3345667887766666666554323467777775322       11  1


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .|..-.++.++.-...+-+.++..++  +..|+
T Consensus       169 ~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  199 (267)
T 3u5t_A          169 HPSYGIYAAAKAGVEAMTHVLSKELR--GRDIT  199 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTT--TSCCE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhh--hhCCE
Confidence            23222455666666677888888875  44555

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=97.82  E-value=4.7e-05  Score=69.51  Aligned_cols=65  Identities=12%  Similarity=0.174  Sum_probs=47.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ++||+||| +|.+|+.++..|...|.       ++.++|+++  ++++.    +...      .+....+..++++++|+
T Consensus        30 ~~~I~iIG-~G~mG~~~a~~l~~~g~-------~V~~~~~~~--~~~~~----~~~~------g~~~~~~~~~~~~~~Dv   89 (316)
T 2uyy_A           30 DKKIGFLG-LGLMGSGIVSNLLKMGH-------TVTVWNRTA--EKCDL----FIQE------GARLGRTPAEVVSTCDI   89 (316)
T ss_dssp             SSCEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSSG--GGGHH----HHHT------TCEECSCHHHHHHHCSE
T ss_pred             CCeEEEEc-ccHHHHHHHHHHHhCCC-------EEEEEeCCH--HHHHH----HHHc------CCEEcCCHHHHHhcCCE
Confidence            47999999 69999999999987663       689999874  33321    2221      12344567788899999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||++.
T Consensus        90 Vi~av   94 (316)
T 2uyy_A           90 TFACV   94 (316)
T ss_dssp             EEECC
T ss_pred             EEEeC
Confidence            99985

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.82  E-value=2.6e-05  Score=69.71  Aligned_cols=153  Identities=14%  Similarity=0.090  Sum_probs=86.9

Q ss_pred             CC-CCCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC--
Q 020022            1 MA-KEPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD--   74 (332)
Q Consensus         1 m~-~~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~--   74 (332)
                      |+ ++.++|.|+||+  |.+|.+++..|+..|.       +|++.|+++  + +.....++.... ....-+... ++  
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~-------~V~~~~r~~--~-~~~~~~~l~~~~-~~~~~~~~D~~~~~   69 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGA-------TLAFTYLNE--S-LEKRVRPIAQEL-NSPYVYELDVSKEE   69 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTC-------EEEEEESST--T-THHHHHHHHHHT-TCCCEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--H-HHHHHHHHHHhc-CCcEEEEcCCCCHH
Confidence            55 345789999998  9999999999998763       799999874  2 221222232210 000001110 11  


Q ss_pred             -hhhh-------cCCCcEEEEeCCCCCC-----C--CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           75 -AVEA-------CTGVNIAVMVGGFPRK-----E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        75 -~~~a-------l~~aDiVi~~ag~~~~-----~--~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                       ..++       +...|++|+.||....     +  ..+   .+..+..|+.....+.+.+..+-.+.++||++|.....
T Consensus        70 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  149 (275)
T 2pd4_A           70 HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGST  149 (275)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhc
Confidence             1122       2367999999997642     1  223   33556788887777877776653223577777653221


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                               .+.+....++.++.-...+-+.+++.+.
T Consensus       150 ---------~~~~~~~~Y~asK~a~~~~~~~la~e~~  177 (275)
T 2pd4_A          150 ---------KYMAHYNVMGLAKAALESAVRYLAVDLG  177 (275)
T ss_dssp             ---------SBCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence                     1122222345555555566666777663

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.82  E-value=0.0001  Score=66.19  Aligned_cols=154  Identities=16%  Similarity=0.215  Sum_probs=83.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|.++++++  +.++....++...... ..-+... ++   ..++ 
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~Dl~d~~~v~~~~  112 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-------HVICISRTQ--KSCDSVVDEIKSFGYE-SSGYAGDVSKKEEISEVI  112 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-------EEEEEESSH--HHHHHHHHHHHTTTCC-EEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHHHhcCCc-eeEEECCCCCHHHHHHHH
Confidence            346899999999999999999998763       788888763  3333333333221100 0001110 11   1122 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                            +.+.|+||+.||.....   ..+   ....+..|+..    ++.+.+.+.+..  ...||++|.....      
T Consensus       113 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~~iv~isS~~~~------  184 (285)
T 2c07_A          113 NKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR--YGRIINISSIVGL------  184 (285)
T ss_dssp             HHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT--CEEEEEECCTHHH------
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC--CCEEEEECChhhc------
Confidence                  24789999999976422   122   23455666655    455555554443  3577777754321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .  +.+....++.+......+.+.+++.+.  +..|+
T Consensus       185 -~--~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  217 (285)
T 2c07_A          185 -T--GNVGQANYSSSKAGVIGFTKSLAKELA--SRNIT  217 (285)
T ss_dssp             -H--CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -c--CCCCCchHHHHHHHHHHHHHHHHHHHH--HhCcE
Confidence             1  122222344455544556666666653  23454

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.82  E-value=2.5e-05  Score=69.71  Aligned_cols=158  Identities=17%  Similarity=0.153  Sum_probs=87.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~   76 (332)
                      |+.+.++|.|+||+|.+|.+++..|+..|.       ++.+.+++. ++.++....++...... ..-+... ++   ..
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~-------~V~~~~r~~-~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~v~   95 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGL-------KVWINYRSN-AEVADALKNELEEKGYK-AAVIKFDAASESDFI   95 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHTTCC-EEEEECCTTCHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcCCc-eEEEECCCCCHHHHH
Confidence            334457899999999999999999998874       788998853 23333222333221100 0001110 11   11


Q ss_pred             hhc-------CCCcEEEEeCCCCCCCC---CCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           77 EAC-------TGVNIAVMVGGFPRKEG---MER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        77 ~al-------~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                      +++       ...|++|+.||......   .+.   ...+..|+.    .++.+.+.+++..  .+.||++|....    
T Consensus        96 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~----  169 (271)
T 4iin_A           96 EAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR--FGSVVNVASIIG----  169 (271)
T ss_dssp             HHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCHHH----
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC--CCEEEEEechhh----
Confidence            222       37899999999864321   222   344555654    4455555555543  356777775322    


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         ..  +.+....++.++.-...+-+.+++.+.  +..|+
T Consensus       170 ---~~--~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  203 (271)
T 4iin_A          170 ---ER--GNMGQTNYSASKGGMIAMSKSFAYEGA--LRNIR  203 (271)
T ss_dssp             ---HH--CCTTCHHHHHHHHHHHHHHHHHHHHHH--TTTEE
T ss_pred             ---cC--CCCCchHhHHHHHHHHHHHHHHHHHHH--HhCcE
Confidence               11  223223455555555566667777654  23555

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.81  E-value=0.0001  Score=65.06  Aligned_cols=120  Identities=14%  Similarity=0.065  Sum_probs=66.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh-
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE-   77 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~-   77 (332)
                      ++.++|.|+||+|++|.+++..|+..|.       +|++.|++..  .......++.........-+... ++   ..+ 
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~-------~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~   82 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA-------NVAVIYRSAA--DAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKT   82 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTE-------EEEEEESSCT--THHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCcch--hhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHH
Confidence            3457899999999999999999998764       7999998642  22212222221100000001110 11   111 


Q ss_pred             ------hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecC
Q 020022           78 ------ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVAN  132 (332)
Q Consensus        78 ------al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tN  132 (332)
                            .+...|+||+.||.....   ..+.   ...+..|+.....+.+.+    .+.. ....||++|.
T Consensus        83 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~iv~~sS  152 (265)
T 1h5q_A           83 IQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQ-QKGSIVVTSS  152 (265)
T ss_dssp             HHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECC
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcC-CCceEEEeCC
Confidence                  233589999999975422   1222   334566765544444443    3333 2356777765

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.81  E-value=7.6e-05  Score=66.87  Aligned_cols=156  Identities=16%  Similarity=0.148  Sum_probs=86.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC-----------chhhhhhhHHHHhhhhcCCccceEee-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-----------AAEALNGVKMELVDAAFPLLKGVVAT-   72 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-----------~~~~l~~~~~dl~~~~~~~~~~~~~~-   72 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|++.           +++.++....++..... ...-+... 
T Consensus        15 gk~~lVTGas~gIG~a~a~~la~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv   86 (280)
T 3pgx_A           15 GRVAFITGAARGQGRSHAVRLAAEGA-------DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDV   86 (280)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCC
Confidence            46899999999999999999999874       789999731           12333322232322110 00001110 


Q ss_pred             CC---hhh-------hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022           73 TD---AVE-------ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        73 ~~---~~~-------al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ++   ..+       .+...|++|+.||.....   ..+.   +..+..|+.    .++.+.+.+.+.. +.+.||++|.
T Consensus        87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS  165 (280)
T 3pgx_A           87 RDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAG-NGGSIVVVSS  165 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-SCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCEEEEEcc
Confidence            11   112       234789999999986422   1232   234556654    4455555555553 2467888875


Q ss_pred             cccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          133 PANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       133 P~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ....         .+.|....++.++.-...+-+.++..+.  +..|+
T Consensus       166 ~~~~---------~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  202 (280)
T 3pgx_A          166 SAGL---------KATPGNGHYSASKHGLTALTNTLAIELG--EYGIR  202 (280)
T ss_dssp             GGGT---------SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             hhhc---------cCCCCchhHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence            4321         1223222355555555666777777754  34555

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.81  E-value=4.7e-05  Score=67.08  Aligned_cols=153  Identities=16%  Similarity=0.134  Sum_probs=84.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh-------
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-------   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a-------   78 (332)
                      +++.|+||+|.+|.+++..|+..|.       +|.+.|+++  +.++....++.........++....+..++       
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   71 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-------KVIATGRRQ--ERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE   71 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4789999999999999999998873       799999874  333322222211000000000000011112       


Q ss_pred             cCCCcEEEEeCCCCC--CC--CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           79 CTGVNIAVMVGGFPR--KE--GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        79 l~~aDiVi~~ag~~~--~~--~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      +...|++|+.||...  .+  ..+.   ...+..|+..    .+.+.+.+.+..  .+.||++|.....         .+
T Consensus        72 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--~g~iv~isS~~~~---------~~  140 (248)
T 3asu_A           72 WCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN--HGHIINIGSTAGS---------WP  140 (248)
T ss_dssp             TCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECCGGGT---------SC
T ss_pred             CCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CceEEEEccchhc---------cC
Confidence            236899999999753  11  1232   3445666544    455555555543  3567777754321         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .|....++.++.....+-+.++..+.  +..|+
T Consensus       141 ~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  171 (248)
T 3asu_A          141 YAGGNVYGATKAFVRQFSLNLRTDLH--GTAVR  171 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTT--TSCCE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence            23222455555555667777777764  34555

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.81  E-value=0.00025  Score=62.77  Aligned_cols=156  Identities=15%  Similarity=0.072  Sum_probs=85.5

Q ss_pred             CCcEEEEEcCCC-chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh
Q 020022            4 EPVRVLVTGAAG-QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G-~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a   78 (332)
                      +.++|.|+||+| .+|.+++..|+..|.       +|++.|++.  +.++....++.........-+... ++   ..++
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   91 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-------DVVISDYHE--RRLGETRDQLADLGLGRVEAVVCDVTSTEAVDAL   91 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-------EEEEecCCH--HHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHH
Confidence            346899999877 599999999999874       799999874  444433333422110000001110 11   1122


Q ss_pred             -------cCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           79 -------CTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        79 -------l~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                             +...|++|+.||......   .+.   ...+..|+..    .+.+.+.+.+.. +..+|+++|.....     
T Consensus        92 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~~sS~~~~-----  165 (266)
T 3o38_A           92 ITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVD-HGGVIVNNASVLGW-----  165 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-CCEEEEEECCGGGT-----
T ss_pred             HHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeCCHHHc-----
Confidence                   236799999999754321   232   3345556544    444444454433 34667777653321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.+....++.++.....+-+.+++.+.  +..|+
T Consensus       166 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~  198 (266)
T 3o38_A          166 ----RAQHSQSHYAAAKAGVMALTRCSAIEAV--EFGVR  198 (266)
T ss_dssp             ----CCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ----CCCCCCchHHHHHHHHHHHHHHHHHHHH--HcCcE
Confidence                1223223455555555667777777654  34555

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.80  E-value=6.4e-05  Score=66.62  Aligned_cols=152  Identities=14%  Similarity=0.072  Sum_probs=88.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      .+++.|+||+|.+|.+++..|+..|.       ++++. +.++  +.++....++...... ..-+... ++   ..++ 
T Consensus         8 ~k~vlVTGas~GIG~aia~~la~~G~-------~V~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~   77 (259)
T 3edm_A            8 NRTIVVAGAGRDIGRACAIRFAQEGA-------NVVLTYNGAA--EGAATAVAEIEKLGRS-ALAIKADLTNAAEVEAAI   77 (259)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECSSC--HHHHHHHHHHHTTTSC-CEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcCCc-eEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999874       67777 5443  3333233333321110 0001111 11   1222 


Q ss_pred             ------cCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           79 ------CTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                            +...|++|+.||....  +  ..+.   ...+..|+.....+.+.+..+-.+.+.||++|.....       . 
T Consensus        78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~-------~-  149 (259)
T 3edm_A           78 SAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGR-------D-  149 (259)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH-------H-
T ss_pred             HHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhc-------c-
Confidence                  2378999999986521  1  2232   3456788887777777776664334567777753221       1 


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCC
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNV  174 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v  174 (332)
                      .+.+....++.++.--..+-+.++..++-
T Consensus       150 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~  178 (259)
T 3edm_A          150 GGGPGALAYATSKGAVMTFTRGLAKEVGP  178 (259)
T ss_dssp             CCSTTCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHCC
Confidence            12232234566666666777888888764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.80  E-value=6.4e-05  Score=67.49  Aligned_cols=157  Identities=13%  Similarity=0.175  Sum_probs=83.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhhc--
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEAC--   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~al--   79 (332)
                      .+++.|+||+|.+|.+++..|+..|.       ++++.|++. .+.++....++.......   ..++....+..+++  
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  100 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASGF-------DIAITGIGD-AEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDA  100 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCC-HHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-------eEEEEeCCC-HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            35789999999999999999999874       788998643 344443333443211000   00111111122222  


Q ss_pred             -----CCCcEEEEeCCCCC---CC--CCCH---HHHHHhhHHH----HHHHHHHHHhhcC-CCeEEEEecCcccchHHHH
Q 020022           80 -----TGVNIAVMVGGFPR---KE--GMER---KDVMSKNVSI----YKAQASALEQHAA-PNCKVLVVANPANTNALIL  141 (332)
Q Consensus        80 -----~~aDiVi~~ag~~~---~~--~~~r---~~~~~~n~~i----~~~i~~~i~~~~~-~~~~viv~tNP~~~~~~~~  141 (332)
                           ...|++|+.||...   .+  ..+.   +..+..|+..    .+.+.+.+.+... +.+.||++|.....     
T Consensus       101 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~-----  175 (280)
T 4da9_A          101 VVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAV-----  175 (280)
T ss_dssp             HHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------
T ss_pred             HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhc-----
Confidence                 37899999999731   11  1232   2344556644    4555555555431 14567777754321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.|..-.++.++.-...+-+.++..+.  +..|+
T Consensus       176 ----~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  208 (280)
T 4da9_A          176 ----MTSPERLDYCMSKAGLAAFSQGLALRLA--ETGIA  208 (280)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHHT--TTTEE
T ss_pred             ----cCCCCccHHHHHHHHHHHHHHHHHHHHH--HhCcE
Confidence                0112222345555555667777887764  34565

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.80  E-value=1.2e-05  Score=73.20  Aligned_cols=94  Identities=15%  Similarity=0.133  Sum_probs=56.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al~~aDi   84 (332)
                      +||+|+||+|++|++++..|+..|.       +|+++++++. .... ...++...... ...++.-...+.++++++|+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~-~~~~-~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~   82 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGH-------PTYVFTRPNS-SKTT-LLDEFQSLGAIIVKGELDEHEKLVELMKKVDV   82 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTC-------CEEEEECTTC-SCHH-HHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCC-------cEEEEECCCC-chhh-HHHHhhcCCCEEEEecCCCHHHHHHHHcCCCE
Confidence            4899999999999999999998762       5888888742 1111 11112111100 00011111235678899999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA  121 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~  121 (332)
                      ||++++...             ....+.+++.+++.+
T Consensus        83 vi~~a~~~~-------------~~~~~~l~~aa~~~g  106 (318)
T 2r6j_A           83 VISALAFPQ-------------ILDQFKILEAIKVAG  106 (318)
T ss_dssp             EEECCCGGG-------------STTHHHHHHHHHHHC
T ss_pred             EEECCchhh-------------hHHHHHHHHHHHhcC
Confidence            999987542             122356666666654

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=97.80  E-value=0.0001  Score=71.56  Aligned_cols=100  Identities=13%  Similarity=0.062  Sum_probs=65.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG--   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~--   81 (332)
                      ..+||+||| +|.+|++++..|+..|.       +|.++|+++  ++++.    +.... . ...+..+++..+++++  
T Consensus        14 ~~~~IgvIG-lG~MG~~lA~~La~~G~-------~V~v~~r~~--~~~~~----l~~~~-~-~~gi~~~~s~~e~v~~l~   77 (480)
T 2zyd_A           14 SKQQIGVVG-MAVMGRNLALNIESRGY-------TVSIFNRSR--EKTEE----VIAEN-P-GKKLVPYYTVKEFVESLE   77 (480)
T ss_dssp             -CBSEEEEC-CSHHHHHHHHHHHTTTC-------CEEEECSSH--HHHHH----HHHHS-T-TSCEEECSSHHHHHHTBC
T ss_pred             CCCeEEEEc-cHHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHH----HHhhC-C-CCCeEEeCCHHHHHhCCC
Confidence            456899999 79999999999998763       699999874  33332    22110 0 1245566677777776  


Q ss_pred             -CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           82 -VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        82 -aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                       +|+||++.-.+    .           .++++++.+..+..|+.+||..+|..
T Consensus        78 ~aDvVil~Vp~~----~-----------~v~~vl~~l~~~l~~g~iIId~s~g~  116 (480)
T 2zyd_A           78 TPRRILLMVKAG----A-----------GTDAAIDSLKPYLDKGDIIIDGGNTF  116 (480)
T ss_dssp             SSCEEEECSCSS----S-----------HHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             CCCEEEEECCCH----H-----------HHHHHHHHHHhhcCCCCEEEECCCCC
Confidence             99999985321    1           13344456666655667777778754

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.80  E-value=4.9e-05  Score=68.07  Aligned_cols=152  Identities=17%  Similarity=0.165  Sum_probs=84.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CCh--------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDA--------   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~--------   75 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|+++   .++....++..... ...-+... ++.        
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~---~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~   99 (273)
T 3uf0_A           31 GRTAVVTGAGSGIGRAIAHGYARAGA-------HVLAWGRTD---GVKEVADEIADGGG-SAEAVVADLADLEGAANVAE   99 (273)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESST---HHHHHHHHHHTTTC-EEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCHH---HHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHH
Confidence            46899999999999999999998874       789999553   23223333322110 00000110 111        


Q ss_pred             -hhhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           76 -VEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        76 -~~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                       .+.....|++|+.||......   .+.   ...+..|+...    +.+.+.+.+..  .+.||++|.....        
T Consensus       100 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~g~IV~isS~~~~--------  169 (273)
T 3uf0_A          100 ELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG--SGRIVTIASMLSF--------  169 (273)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT--------
T ss_pred             HHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCEEEEEcchHhc--------
Confidence             111247899999999864321   232   34456666544    44455555543  3677787754321        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.+..-.++.++.--..+-+.++..++  +..|+
T Consensus       170 -~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  202 (273)
T 3uf0_A          170 -QGGRNVAAYAASKHAVVGLTRALASEWA--GRGVG  202 (273)
T ss_dssp             -SCCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -CCCCCChhHHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence             1223222355555555667777777764  34555

>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}

Probab=97.80  E-value=7.7e-05  Score=67.83  Aligned_cols=104  Identities=16%  Similarity=0.189  Sum_probs=61.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhc-----c-cCCCCCceEEEEEeCCCchhhhhhhHHHHhh--hhc--C-----C
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARG-----V-MLGTDQPVILHMLDIPPAAEALNGVKMELVD--AAF--P-----L   65 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~-----~-~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~--~~~--~-----~   65 (332)
                      |+.++|||+||| +|.+|+.++..|...     | .       +|.++|+ +  ++++.    +.+  ...  .     .
T Consensus         4 m~~~~m~I~iiG-~G~mG~~~a~~L~~~~~~~~g~~-------~V~~~~r-~--~~~~~----l~~~~g~~~~~~~~~~~   68 (317)
T 2qyt_A            4 MNQQPIKIAVFG-LGGVGGYYGAMLALRAAATDGLL-------EVSWIAR-G--AHLEA----IRAAGGLRVVTPSRDFL   68 (317)
T ss_dssp             ---CCEEEEEEC-CSHHHHHHHHHHHHHHHHTTSSE-------EEEEECC-H--HHHHH----HHHHTSEEEECSSCEEE
T ss_pred             CCCCCCEEEEEC-cCHHHHHHHHHHHhCccccCCCC-------CEEEEEc-H--HHHHH----HHhcCCeEEEeCCCCeE
Confidence            666678999999 699999999999876     5 3       7999997 3  22321    211  110  0     0


Q ss_pred             ccceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           66 LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        66 ~~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      ..++..+++ .++++++|+||++....    .            ++++++.+..+-.++..||.++|..+.
T Consensus        69 ~~~~~~~~~-~~~~~~~D~vil~vk~~----~------------~~~v~~~i~~~l~~~~~iv~~~nG~~~  122 (317)
T 2qyt_A           69 ARPTCVTDN-PAEVGTVDYILFCTKDY----D------------MERGVAEIRPMIGQNTKILPLLNGADI  122 (317)
T ss_dssp             ECCSEEESC-HHHHCCEEEEEECCSSS----C------------HHHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred             EecceEecC-ccccCCCCEEEEecCcc----c------------HHHHHHHHHhhcCCCCEEEEccCCCCc
Confidence            012233343 35678999999985322    1            234445565554355666667886653

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=97.80  E-value=3.4e-05  Score=70.48  Aligned_cols=108  Identities=16%  Similarity=0.213  Sum_probs=63.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh--hhcCCccceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD--AAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~--~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      |||+|+| +|.+|+.++..|...|.       +|.++++++ .+.++.....+..  .... ...+..+++. +++.++|
T Consensus         3 mkI~IiG-aGaiG~~~a~~L~~~g~-------~V~~~~r~~-~~~i~~~g~~~~~~~g~~~-~~~~~~~~~~-~~~~~~D   71 (312)
T 3hn2_A            3 LRIAIVG-AGALGLYYGALLQRSGE-------DVHFLLRRD-YEAIAGNGLKVFSINGDFT-LPHVKGYRAP-EEIGPMD   71 (312)
T ss_dssp             -CEEEEC-CSTTHHHHHHHHHHTSC-------CEEEECSTT-HHHHHHTCEEEEETTCCEE-ESCCCEESCH-HHHCCCS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEEcCc-HHHHHhCCCEEEcCCCeEE-EeeceeecCH-HHcCCCC
Confidence            6899999 69999999999998763       699999863 1111100000000  0000 0123334444 4578999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                      +||++.-..    .            +++.++.++.+-.++..|+.+.|-++....+
T Consensus        72 ~vilavk~~----~------------~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l  112 (312)
T 3hn2_A           72 LVLVGLKTF----A------------NSRYEELIRPLVEEGTQILTLQNGLGNEEAL  112 (312)
T ss_dssp             EEEECCCGG----G------------GGGHHHHHGGGCCTTCEEEECCSSSSHHHHH
T ss_pred             EEEEecCCC----C------------cHHHHHHHHhhcCCCCEEEEecCCCCcHHHH
Confidence            999984211    1            2244556666655677777888987644433

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.79  E-value=5.3e-05  Score=67.95  Aligned_cols=153  Identities=14%  Similarity=0.123  Sum_probs=87.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV----   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~----   76 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++...... ..-+... ++   ..    
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~Dv~d~~~v~~~~~   93 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAARGI-------AVYGCARDA--KNVSAAVDGLRAAGHD-VDGSSCDVTSTDEVHAAVA   93 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHTTTCC-EEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-EEEEECCCCCHHHHHHHHH
Confidence            46899999999999999999999874       799999874  4444333444321100 0001110 11   11    


Q ss_pred             ---hhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHH------hhcCCCeEEEEecCcccchHHHH
Q 020022           77 ---EACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALE------QHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        77 ---~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~------~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                         +.+...|++|+.||......   .+   ....+..|+.....+.+.+.      +..  .+.||++|.....     
T Consensus        94 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~--~g~iV~isS~~~~-----  166 (279)
T 3sju_A           94 AAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG--WGRIVNIASTGGK-----  166 (279)
T ss_dssp             HHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT--CEEEEEECCGGGT-----
T ss_pred             HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC--CcEEEEECChhhc-----
Confidence               12236899999999764221   22   23455677766555555443      332  3677788754331     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.+..-.++.++.-...+-+.++..++  +..|+
T Consensus       167 ----~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~  199 (279)
T 3sju_A          167 ----QGVMYAAPYTASKHGVVGFTKSVGFELA--KTGIT  199 (279)
T ss_dssp             ----SCCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEE
T ss_pred             ----cCCCCChhHHHHHHHHHHHHHHHHHHHH--hhCcE
Confidence                1222222345555555667777777764  34565

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.79  E-value=4.2e-05  Score=68.61  Aligned_cols=149  Identities=13%  Similarity=0.154  Sum_probs=80.8

Q ss_pred             CCcEEEEEcCCCc--hHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh-
Q 020022            4 EPVRVLVTGAAGQ--IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV-   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~--vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~-   76 (332)
                      +.++|.|+||+|+  +|.+++..|+..|.       +|.+.|++...+.+    .++.... ....-+... ++   .. 
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~----~~l~~~~-~~~~~~~~Dl~~~~~v~~   92 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGA-------ELAFTYVGQFKDRV----EKLCAEF-NPAAVLPCDVISDQEIKD   92 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTC-------EEEEEECTTCHHHH----HHHHGGG-CCSEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCC-------EEEEeeCchHHHHH----HHHHHhc-CCceEEEeecCCHHHHHH
Confidence            3478999999866  99999999998874       79999987421222    2222111 000001110 11   11 


Q ss_pred             ------hhcCCCcEEEEeCCCCCCC---C-----CCH---HHHHHhhHHHHHHHHHHHHhhcC-CCeEEEEecCcccchH
Q 020022           77 ------EACTGVNIAVMVGGFPRKE---G-----MER---KDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPANTNA  138 (332)
Q Consensus        77 ------~al~~aDiVi~~ag~~~~~---~-----~~r---~~~~~~n~~i~~~i~~~i~~~~~-~~~~viv~tNP~~~~~  138 (332)
                            +.+...|++|+.||.....   +     .+.   ...+..|+.....+.+.+..+-. ..+.||++|.....  
T Consensus        93 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~--  170 (280)
T 3nrc_A           93 LFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAE--  170 (280)
T ss_dssp             HHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGT--
T ss_pred             HHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccc--
Confidence                  2234579999999986421   1     222   23456666555555555443311 13567777654321  


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                             .+.|....++.++.....+-+.+++.+.
T Consensus       171 -------~~~~~~~~Y~asKaal~~~~~~la~e~~  198 (280)
T 3nrc_A          171 -------KAMPSYNTMGVAKASLEATVRYTALALG  198 (280)
T ss_dssp             -------SCCTTTHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -------cCCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence                   1223222445555555566667777664

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=97.79  E-value=0.0001  Score=66.16  Aligned_cols=92  Identities=13%  Similarity=0.041  Sum_probs=58.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.+|+.++..|.. |.       ++.++|+++  ++++.    +....      +...+ ..++++++|+|
T Consensus         2 ~~i~iiG-~G~~G~~~a~~l~~-g~-------~V~~~~~~~--~~~~~----~~~~g------~~~~~-~~~~~~~~D~v   59 (289)
T 2cvz_A            2 EKVAFIG-LGAMGYPMAGHLAR-RF-------PTLVWNRTF--EKALR----HQEEF------GSEAV-PLERVAEARVI   59 (289)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHT-TS-------CEEEECSST--HHHHH----HHHHH------CCEEC-CGGGGGGCSEE
T ss_pred             CeEEEEc-ccHHHHHHHHHHhC-CC-------eEEEEeCCH--HHHHH----HHHCC------CcccC-HHHHHhCCCEE
Confidence            5899999 69999999999987 63       689999874  33321    11111      11223 56778899999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      |++...+               ..++++.+.+.....++..|+..+|..
T Consensus        60 i~~v~~~---------------~~~~~v~~~l~~~l~~~~~vv~~s~~~   93 (289)
T 2cvz_A           60 FTCLPTT---------------REVYEVAEALYPYLREGTYWVDATSGE   93 (289)
T ss_dssp             EECCSSH---------------HHHHHHHHHHTTTCCTTEEEEECSCCC
T ss_pred             EEeCCCh---------------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence            9985321               112334455555555677677677743

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.78  E-value=4.7e-05  Score=68.44  Aligned_cols=150  Identities=17%  Similarity=0.133  Sum_probs=84.6

Q ss_pred             CCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh
Q 020022            4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE   77 (332)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~   77 (332)
                      ..++|.|+||+  |++|.+++..|+..|.       +|++.|+++  + ++....++.... ....-+... ++   ..+
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-------~V~~~~r~~--~-~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~   88 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-------QLAFTYATP--K-LEKRVREIAKGF-GSDLVVKCDVSLDEDIKN   88 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-------EEEEEESSG--G-GHHHHHHHHHHT-TCCCEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-------EEEEEeCCH--H-HHHHHHHHHHhc-CCeEEEEcCCCCHHHHHH
Confidence            34689999988  8999999999998763       789999874  2 221222232210 000011111 11   112


Q ss_pred             h-------cCCCcEEEEeCCCCCC-----C--CCC---HHHHHHhhHHHHHHHHHHHHhhcC-CCeEEEEecCcccchHH
Q 020022           78 A-------CTGVNIAVMVGGFPRK-----E--GME---RKDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPANTNAL  139 (332)
Q Consensus        78 a-------l~~aDiVi~~ag~~~~-----~--~~~---r~~~~~~n~~i~~~i~~~i~~~~~-~~~~viv~tNP~~~~~~  139 (332)
                      +       +...|++|+.||....     +  ..+   ....+..|+.....+.+.+..+-. +.++||++|.....   
T Consensus        89 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~---  165 (285)
T 2p91_A           89 LKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAE---  165 (285)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGT---
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhc---
Confidence            2       2368999999997632     1  223   234567788777777777765532 23567777653221   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                            .+.|....++.++.....+-+.++..+.
T Consensus       166 ------~~~~~~~~Y~~sK~a~~~~~~~la~e~~  193 (285)
T 2p91_A          166 ------KVVPHYNVMGIAKAALESTVRYLAYDIA  193 (285)
T ss_dssp             ------SBCTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCCCccHHHHHHHHHHHHHHHHHHHhc
Confidence                  1122222345555555566666776653

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.78  E-value=5.5e-05  Score=68.44  Aligned_cols=154  Identities=13%  Similarity=0.113  Sum_probs=87.9

Q ss_pred             CcEEEEEcCCCc--hHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh--
Q 020022            5 PVRVLVTGAAGQ--IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV--   76 (332)
Q Consensus         5 ~~kI~IiGa~G~--vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~--   76 (332)
                      .+++.|+||+|+  +|.+++..|+..|.       .|++.|+++  +..+ ...++.... ....-+... ++   ..  
T Consensus        31 gk~~lVTGasg~~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~-~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~   99 (293)
T 3grk_A           31 GKRGLILGVANNRSIAWGIAKAAREAGA-------ELAFTYQGD--ALKK-RVEPLAEEL-GAFVAGHCDVADAASIDAV   99 (293)
T ss_dssp             TCEEEEECCCSSSSHHHHHHHHHHHTTC-------EEEEEECSH--HHHH-HHHHHHHHH-TCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCC-------EEEEEcCCH--HHHH-HHHHHHHhc-CCceEEECCCCCHHHHHHH
Confidence            468999999888  99999999999874       789999873  2111 122222111 000000000 11   11  


Q ss_pred             -----hhcCCCcEEEEeCCCCC-----CC--CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           77 -----EACTGVNIAVMVGGFPR-----KE--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        77 -----~al~~aDiVi~~ag~~~-----~~--~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                           +.+...|++|+.||...     .+  ..+   ....+..|+.....+.+.+..+-.+.+.||++|.....     
T Consensus       100 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~-----  174 (293)
T 3grk_A          100 FETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAE-----  174 (293)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGT-----
T ss_pred             HHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhc-----
Confidence                 22247899999999863     11  223   33456778777777777666554345678777754321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.+....++.++.--..+-+.++..++  +..|+
T Consensus       175 ----~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  207 (293)
T 3grk_A          175 ----KVMPNYNVMGVAKAALEASVKYLAVDLG--PQNIR  207 (293)
T ss_dssp             ----SBCTTTTHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ----cCCCchHHHHHHHHHHHHHHHHHHHHHh--HhCCE
Confidence                1223222445555555667777777764  34555

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.78  E-value=4.1e-05  Score=67.67  Aligned_cols=153  Identities=18%  Similarity=0.205  Sum_probs=84.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhhc--
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEAC--   79 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~al--   79 (332)
                      +++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.... ....-+... ++   ..+++  
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~   72 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGF-------AVAIADYND--ATAKAVASEINQAG-GHAVAVKVDVSDRDQVFAAVEQ   72 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHH
Confidence            5799999999999999999998873       799999874  33433333332211 000001111 11   12222  


Q ss_pred             -----CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           80 -----TGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        80 -----~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                           ...|++|+.||.....   ..+.   +..+..|+.    .++.+.+.+.+.. +...||++|.-...        
T Consensus        73 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~--------  143 (256)
T 1geg_A           73 ARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEG-HGGKIINACSQAGH--------  143 (256)
T ss_dssp             HHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCGGGT--------
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCEEEEECchhhc--------
Confidence                 3789999999975321   1222   234566654    4455555555543 13577777754321        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.|....++.++.....+-+.++..+.  +..|+
T Consensus       144 -~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  176 (256)
T 1geg_A          144 -VGNPELAVYSSSKFAVRGLTQTAARDLA--PLGIT  176 (256)
T ss_dssp             -SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHHH--HcCeE
Confidence             1222222344445444566666776654  34555

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.78  E-value=0.00049  Score=61.14  Aligned_cols=149  Identities=11%  Similarity=0.110  Sum_probs=81.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh--
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA--   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a--   78 (332)
                      .++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........-+... ++   ..++  
T Consensus        21 ~k~~lVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           21 GRVALVTGGSRGLGFGIAQGLAEAGC-------SVVVASRNL--EEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            46899999999999999999998874       799999874  344333333311110000001110 11   1122  


Q ss_pred             -----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHH----HHHHhhcCCCeEEEEecCcc-cchHHHHH
Q 020022           79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPA-NTNALILK  142 (332)
Q Consensus        79 -----l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~----~~i~~~~~~~~~viv~tNP~-~~~~~~~~  142 (332)
                           +...|++|+.||.....   ..+.   ...+..|+.....+.    +.+++..  ...||++|... ..      
T Consensus        92 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--~g~iv~isS~~~~~------  163 (267)
T 1vl8_A           92 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD--NPSIINIGSLTVEE------  163 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS--SCEEEEECCGGGTC------
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CcEEEEECCcchhc------
Confidence                 23789999999976422   1222   344566665554444    4444432  35677776533 21      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                         .+.+....++.++.....+-+.+++.++
T Consensus       164 ---~~~~~~~~Y~asK~a~~~~~~~la~e~~  191 (267)
T 1vl8_A          164 ---VTMPNISAYAASKGGVASLTKALAKEWG  191 (267)
T ss_dssp             ---CCSSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---cCCCCChhHHHHHHHHHHHHHHHHHHhc
Confidence               1122222344455555566667777654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.77  E-value=8e-05  Score=66.69  Aligned_cols=150  Identities=13%  Similarity=0.151  Sum_probs=80.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC------hh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD------AV   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~------~~   76 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.... ....++.. ..|      ..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~   74 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-------NVTITGRSS--ERLEETRQIILKSG-VSEKQVNSVVADVTTEDGQD   74 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHTTT-CCGGGEEEEECCTTSHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHcC-CCCcceEEEEecCCCHHHHH
Confidence            457899999999999999999998874       799999874  34433333332210 00001111 111      11


Q ss_pred             hh-------cCCCcEEEEeCCCCCCC-------CCC---HHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccch
Q 020022           77 EA-------CTGVNIAVMVGGFPRKE-------GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTN  137 (332)
Q Consensus        77 ~a-------l~~aDiVi~~ag~~~~~-------~~~---r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~  137 (332)
                      ++       +...|++|+.||.....       ..+   ....+..|+.....+.+.+..+.  .+ ..||++|.-... 
T Consensus        75 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~-  152 (280)
T 1xkq_A           75 QIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAG-  152 (280)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGS-
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCcccc-
Confidence            22       23689999999975321       122   23445666655544444443321  12 467777653321 


Q ss_pred             HHHHHHhCCCC-CCCcEEEechHHHHHHHHHHHHHcC
Q 020022          138 ALILKEFAPSI-PAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       138 ~~~~~~~~~~~-~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                              .+. |....++.++.....+-+.++..+.
T Consensus       153 --------~~~~~~~~~Y~asK~a~~~~~~~la~e~~  181 (280)
T 1xkq_A          153 --------PQAQPDFLYYAIAKAALDQYTRSTAIDLA  181 (280)
T ss_dssp             --------SSCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CCCCCcccHHHHHHHHHHHHHHHHHHHhc
Confidence                    111 2222344455544556666666553

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.77  E-value=0.00016  Score=64.86  Aligned_cols=152  Identities=13%  Similarity=0.043  Sum_probs=86.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---h----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---A----   75 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~----   75 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|++.. +.++....++...... ..-+... ++   .    
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~-~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~   98 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-------KVIVNYANST-ESAEEVVAAIKKNGSD-AACVKANVGVVEDIVRMF   98 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSCH-HHHHHHHHHHHHTTCC-EEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCch-HHHHHHHHHHHHhCCC-eEEEEcCCCCHHHHHHHH
Confidence            346899999999999999999998874       7889988742 2222222223221100 0000010 11   1    


Q ss_pred             ---hhhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           76 ---VEACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        76 ---~~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                         .+.+...|++|+.||.....   ..+   ....+..|+.....+.+.+..+-.+.+.||++|.-...         .
T Consensus        99 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~---------~  169 (283)
T 1g0o_A           99 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ---------A  169 (283)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGT---------C
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhc---------c
Confidence               12234789999999976421   122   34457788887777777776662234577777753221         1


Q ss_pred             CCCC-CcEEEechHHHHHHHHHHHHHcC
Q 020022          147 SIPA-KNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       147 ~~~~-~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      +.+. ...++.++.-...+-+.++..+.
T Consensus       170 ~~~~~~~~Y~asK~a~~~~~~~la~e~~  197 (283)
T 1g0o_A          170 KAVPKHAVYSGSKGAIETFARCMAIDMA  197 (283)
T ss_dssp             SSCSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            1121 22345555555566666776653

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.77  E-value=8.1e-05  Score=66.61  Aligned_cols=156  Identities=14%  Similarity=0.131  Sum_probs=82.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh------h
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE------A   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~------a   78 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.........++....+..+      .
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  100 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADGL-------GVVIADLAA--EKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQ  100 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            36799999999999999999998874       799999874  44433333331100000000000001111      2


Q ss_pred             cCCCcEEEEe-CCCCCCC--------CCC---HHHHHHhhHHHHHHHHH----HHHhhc----CCCeEEEEecCcccchH
Q 020022           79 CTGVNIAVMV-GGFPRKE--------GME---RKDVMSKNVSIYKAQAS----ALEQHA----APNCKVLVVANPANTNA  138 (332)
Q Consensus        79 l~~aDiVi~~-ag~~~~~--------~~~---r~~~~~~n~~i~~~i~~----~i~~~~----~~~~~viv~tNP~~~~~  138 (332)
                      +...|++|+. +|.....        ..+   ....+..|+.....+.+    .+.+..    .+.+.||++|.....  
T Consensus       101 ~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--  178 (281)
T 3ppi_A          101 LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY--  178 (281)
T ss_dssp             SSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGT--
T ss_pred             hCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccccc--
Confidence            2367999998 6654321        122   23445566544444444    443310    134677777754431  


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                             .+.+....++.++.....+-+.+++.+.  +..|+
T Consensus       179 -------~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  211 (281)
T 3ppi_A          179 -------EGQIGQTAYAAAKAGVIGLTIAAARDLS--SAGIR  211 (281)
T ss_dssp             -------SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -------CCCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence                   1223222455555555566677777764  33455

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=97.77  E-value=3.9e-05  Score=68.80  Aligned_cols=101  Identities=10%  Similarity=0.063  Sum_probs=63.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cCCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |||+||| +|.+|+.++..|...|.       +|.++|+++  ++++.    +.... ...........+..++++++|+
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g~-------~V~~~~r~~--~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~d~   66 (291)
T 1ks9_A            1 MKITVLG-CGALGQLWLTALCKQGH-------EVQGWLRVP--QPYCS----VNLVETDGSIFNESLTANDPDFLATSDL   66 (291)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSC--CSEEE----EEEECTTSCEEEEEEEESCHHHHHTCSE
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhCCC-------CEEEEEcCc--cceee----EEEEcCCCceeeeeeeecCccccCCCCE
Confidence            4899999 69999999999998763       799999875  33321    11100 0000011122233567889999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      ||++....    .            +.++.+.+..+..++..|+..+|..+.
T Consensus        67 vi~~v~~~----~------------~~~v~~~l~~~l~~~~~vv~~~~g~~~  102 (291)
T 1ks9_A           67 LLVTLKAW----Q------------VSDAVKSLASTLPVTTPILLIHNGMGT  102 (291)
T ss_dssp             EEECSCGG----G------------HHHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred             EEEEecHH----h------------HHHHHHHHHhhCCCCCEEEEecCCCCc
Confidence            99985322    0            234555666665566777778887653

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.76  E-value=0.00015  Score=64.89  Aligned_cols=156  Identities=19%  Similarity=0.213  Sum_probs=87.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~~al   79 (332)
                      ..+++.|+||+|.+|.+++..|+..|.       .|++.|+++  +.++....++...... ..-+... +   +..+++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~Dl~d~~~v~~~~  100 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-------QVAVAARHS--DALQVVADEIAGVGGK-ALPIRCDVTQPDQVRGML  100 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESSG--GGGHHHHHHHHHTTCC-CEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCe-EEEEEcCCCCHHHHHHHH
Confidence            347899999999999999999999874       799999874  4444444444322110 0011111 1   112222


Q ss_pred             -------CCCcEEEEeCCCCCCC---CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           80 -------TGVNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        80 -------~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                             ...|++|+.||.....   ..+.+   ..+..|+.    ..+.+.+.+.+.. ..+.||+++.....      
T Consensus       101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~~g~iv~isS~~~~------  173 (276)
T 3r1i_A          101 DQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQG-LGGTIITTASMSGH------  173 (276)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCGGGT------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEECchHhc------
Confidence                   3789999999986432   12332   34456654    4445555555543 23667777653321      


Q ss_pred             HhCCCCCCC-cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAK-NITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~-~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        ....++. ..++.++.-...+-+.+++.++  +..|+
T Consensus       174 --~~~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gIr  208 (276)
T 3r1i_A          174 --IINIPQQVSHYCTSKAAVVHLTKAMAVELA--PHQIR  208 (276)
T ss_dssp             --SCCCSSCCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             --ccCCCCCcchHHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence              0111111 1345555555667777777764  34555

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.76  E-value=0.00029  Score=62.74  Aligned_cols=157  Identities=15%  Similarity=0.072  Sum_probs=90.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh--
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA--   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a--   78 (332)
                      .+++.|+||+|.+|.+++..|+..|.       ++.+.|.+. .+.++....++..... ...-+... ++   ..++  
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~G~-------~V~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~   88 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRLGA-------KVVVNYANS-TKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFD   88 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCC-HHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHH
Confidence            36899999999999999999998874       688877653 2333333333332110 00001110 11   1122  


Q ss_pred             -----cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           79 -----CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        79 -----l~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                           +...|++|+.||......   .+   ....+..|+.-...+.+.+..+-.+.+.||+++.....       . .+
T Consensus        89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~-------~-~~  160 (270)
T 3is3_A           89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK-------D-FS  160 (270)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT-------T-CC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc-------c-CC
Confidence                 236899999999864221   23   33456778877777777666654445677777653310       0 12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .|....++.++.--..+-+.++..++  +..|+
T Consensus       161 ~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  191 (270)
T 3is3_A          161 VPKHSLYSGSKGAVDSFVRIFSKDCG--DKKIT  191 (270)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence            23223455555555667777777765  33454

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.76  E-value=8.4e-05  Score=66.40  Aligned_cols=153  Identities=14%  Similarity=0.189  Sum_probs=86.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV----   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~----   76 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|.+.|+++  +.++....++...... ...+... ++   ..    
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~   97 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELARRGA-------MVIGTATTE--AGAEGIGAAFKQAGLE-GRGAVLNVNDATAVDALVE   97 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHHHHTCC-CEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-EEEEEEeCCCHHHHHHHHH
Confidence            46899999999999999999999874       799999874  4444333334322110 0001110 11   11    


Q ss_pred             ---hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHH----HHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           77 ---EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        77 ---~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~----i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                         +.+...|++|+.||.....   ..+.   +..+..|+.-...    +.+.+.+..  .+.||++|....       .
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~-------~  168 (270)
T 3ftp_A           98 STLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR--GGRIVNITSVVG-------S  168 (270)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCHHH-------H
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CCEEEEECchhh-------C
Confidence               2233789999999975422   1232   3445666654444    444444443  467778775322       1


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .  +.|....++.++.-...+-+.+++.+.  +..|+
T Consensus       169 ~--~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  201 (270)
T 3ftp_A          169 A--GNPGQVNYAAAKAGVAGMTRALAREIG--SRGIT  201 (270)
T ss_dssp             H--CCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             C--CCCCchhHHHHHHHHHHHHHHHHHHHh--hhCeE
Confidence            1  223222455555555567777777764  34555

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.76  E-value=5.7e-05  Score=66.42  Aligned_cols=151  Identities=18%  Similarity=0.180  Sum_probs=81.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh---hHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG---VKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~---~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++.   ...|+.+....  ..  ......+.+.
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~D~~~~~~~--~~--~~~~~~~~~g   80 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-------KVAVTHRGS--GAPKGLFGVEVDVTDSDAV--DR--AFTAVEEHQG   80 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSS--CCCTTSEEEECCTTCHHHH--HH--HHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHhcCeeccCCCHHHH--HH--HHHHHHHHcC
Confidence            346899999999999999999998763       789999875  22221   12233221100  00  0001122234


Q ss_pred             CCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHH----HHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022           81 GVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA  150 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~----~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~  150 (332)
                      ..|++|+.||.....   ..+   ....+..|+.....+.    +.+++..  ...||++|......         +.+.
T Consensus        81 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~~---------~~~~  149 (247)
T 1uzm_A           81 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK--FGRMIFIGSVSGLW---------GIGN  149 (247)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEEECCCCC--------------C
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCEEEEECCHhhcc---------CCCC
Confidence            689999999976421   222   2344566665444444    4444432  36777777543311         1121


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ...++.++.....+-+.+++.+.  +..|+
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  177 (247)
T 1uzm_A          150 QANYAASKAGVIGMARSIARELS--KANVT  177 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence            22344444444556666776654  34555

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.75  E-value=7.2e-05  Score=68.19  Aligned_cols=65  Identities=18%  Similarity=0.239  Sum_probs=48.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| .|.+|..++..|+..|.       +|.++|+++  ++++.    +...      .....++..+++++||+
T Consensus         9 ~~~IgiIG-~G~mG~~~A~~l~~~G~-------~V~~~dr~~--~~~~~----~~~~------g~~~~~~~~e~~~~aDv   68 (306)
T 3l6d_A            9 EFDVSVIG-LGAMGTIMAQVLLKQGK-------RVAIWNRSP--GKAAA----LVAA------GAHLCESVKAALSASPA   68 (306)
T ss_dssp             SCSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSSH--HHHHH----HHHH------TCEECSSHHHHHHHSSE
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHH----HHHC------CCeecCCHHHHHhcCCE
Confidence            47999999 79999999999998763       689999984  33322    2221      12344678888999999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||++.
T Consensus        69 Vi~~v   73 (306)
T 3l6d_A           69 TIFVL   73 (306)
T ss_dssp             EEECC
T ss_pred             EEEEe
Confidence            99984

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.75  E-value=7.6e-05  Score=65.40  Aligned_cols=151  Identities=17%  Similarity=0.172  Sum_probs=87.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCch--hhhhhhHHHHhhhhcCCccceEeeCChhhh--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAA--EALNGVKMELVDAAFPLLKGVVATTDAVEA--   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~--~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a--   78 (332)
                      +++++.|+||+|.+|.+++..|+. .+.       .+.+.|+++..  +.+.....|+.+...     +   ....+.  
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-------~v~~~~~~~~~~~~~~~~~~~Dv~~~~~-----v---~~~~~~~~   67 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNH-------TVINIDIQQSFSAENLKFIKADLTKQQD-----I---TNVLDIIK   67 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTE-------EEEEEESSCCCCCTTEEEEECCTTCHHH-----H---HHHHHHTT
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCc-------EEEEeccccccccccceEEecCcCCHHH-----H---HHHHHHHH
Confidence            456899999999999999999987 442       68888887520  111112233332210     0   000111  


Q ss_pred             cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc
Q 020022           79 CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN  152 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~  152 (332)
                      ....|++|+.||.....   ..+   .+..+..|+.-...+.+.+..+-.+.+.||++|.....         .+.|..-
T Consensus        68 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~---------~~~~~~~  138 (244)
T 4e4y_A           68 NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCF---------IAKPNSF  138 (244)
T ss_dssp             TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGT---------CCCTTBH
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHc---------cCCCCCc
Confidence            23789999999985321   223   33456788877777777766654333567777654321         1223222


Q ss_pred             EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          153 ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       153 i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .++.++.-...+-+.+++.+.  +..|+
T Consensus       139 ~Y~asKaa~~~~~~~la~e~~--~~gi~  164 (244)
T 4e4y_A          139 AYTLSKGAIAQMTKSLALDLA--KYQIR  164 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             hhHHHHHHHHHHHHHHHHHHH--HcCeE
Confidence            355555555667777777664  33454

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.75  E-value=0.00021  Score=63.22  Aligned_cols=154  Identities=18%  Similarity=0.185  Sum_probs=83.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CCh---h---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDA---V---   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~---~---   76 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++...... ..-+... ++.   .   
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~   75 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-------AIALLDMNR--EALEKAEASVREKGVE-ARSYVCDVTSEEAVIGTV   75 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHTTTSC-EEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-EEEEEecCCCHHHHHHHH
Confidence            347899999999999999999999874       789999874  3443333333221100 0001111 111   1   


Q ss_pred             ----hhcCCCcEEEEeCCCC-CC-C--CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           77 ----EACTGVNIAVMVGGFP-RK-E--GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        77 ----~al~~aDiVi~~ag~~-~~-~--~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                          +.+...|++|+.||.. .. +  ..+.   ...+..|+...    +.+.+.+.+..  .+.||++|.....     
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~-----  148 (262)
T 1zem_A           76 DSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN--YGRIVNTASMAGV-----  148 (262)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCHHHH-----
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEEcchhhc-----
Confidence                1233789999999975 21 1  1222   34455666544    44444444433  3577777753221     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.|..-.++.++.....+-+.++..+.  +..|+
T Consensus       149 ----~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  181 (262)
T 1zem_A          149 ----KGPPNMAAYGTSKGAIIALTETAALDLA--PYNIR  181 (262)
T ss_dssp             ----SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ----cCCCCCchHHHHHHHHHHHHHHHHHHHH--hhCeE
Confidence                1222222344444444456666666654  34555

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.75  E-value=9.7e-05  Score=65.84  Aligned_cols=144  Identities=18%  Similarity=0.195  Sum_probs=81.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH--------HHHhhhhcCCccceE-eeCCh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK--------MELVDAAFPLLKGVV-ATTDA   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~--------~dl~~~~~~~~~~~~-~~~~~   75 (332)
                      .++|.|+||+|.+|.+++..|+..|.       +|++.|++.  +.++...        .|+.+...     +. .....
T Consensus        16 ~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~Dv~d~~~-----v~~~~~~~   81 (266)
T 3p19_A           16 KKLVVITGASSGIGEAIARRFSEEGH-------PLLLLARRV--ERLKALNLPNTLCAQVDVTDKYT-----FDTAITRA   81 (266)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-------CEEEEESCH--HHHHTTCCTTEEEEECCTTCHHH-----HHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHhhcCCceEEEecCCCHHH-----HHHHHHHH
Confidence            46799999999999999999999874       689999874  3332110        11111000     00 00011


Q ss_pred             hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           76 VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                      .+.+...|++|+.||.....   ..+.   +..+..|+...    +.+.+.+.+..  .+.||++|.-...         
T Consensus        82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--~g~IV~isS~~~~---------  150 (266)
T 3p19_A           82 EKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN--CGTIINISSIAGK---------  150 (266)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECCGGGT---------
T ss_pred             HHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEcChhhC---------
Confidence            12234789999999975422   1232   34456666544    44555555554  3567777754321         


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .+.+..-.++.++.....+-+.++..++
T Consensus       151 ~~~~~~~~Y~asK~a~~~~~~~la~e~~  178 (266)
T 3p19_A          151 KTFPDHAAYCGTKFAVHAISENVREEVA  178 (266)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence            1233223455555555666777777764

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.75  E-value=0.00019  Score=64.33  Aligned_cols=155  Identities=17%  Similarity=0.179  Sum_probs=81.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh--
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA--   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a--   78 (332)
                      .++|.|+||+|++|.+++..|+..|.       +|+++|+++  +.++....++.........-+... ++   ..++  
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~   98 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGA-------HVVVTARSK--ETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA   98 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH
Confidence            46899999999999999999998763       799999874  344333322322110000000110 11   1122  


Q ss_pred             -----cCCCcEEEEe-CCCCCCC--CCCH---HHHHHhhHHHHHHHH----HHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           79 -----CTGVNIAVMV-GGFPRKE--GMER---KDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        79 -----l~~aDiVi~~-ag~~~~~--~~~r---~~~~~~n~~i~~~i~----~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                           +.+.|++|+. +|....+  ..+.   ...+..|+.....+.    +.+.+.  . ..||++|.....       
T Consensus        99 ~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~-g~iv~isS~~~~-------  168 (286)
T 1xu9_A           99 QAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--N-GSIVVVSSLAGK-------  168 (286)
T ss_dssp             HHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--T-CEEEEEEEGGGT-------
T ss_pred             HHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--C-CEEEEECCcccc-------
Confidence                 2378999998 6765322  1222   334566665444444    433332  2 456677643321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.|....++.++.-...+...++..++.....|+
T Consensus       169 --~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~  203 (286)
T 1xu9_A          169 --VAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS  203 (286)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred             --cCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeE
Confidence              12222223444555445556666666633334554

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=97.75  E-value=0.00034  Score=62.48  Aligned_cols=92  Identities=20%  Similarity=0.161  Sum_probs=59.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.+|+.++..|...+.       +|.++|+++  +.++.    +.....    .....++..++ +++|+|
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g~-------~V~~~~~~~--~~~~~----~~~~g~----~~~~~~~~~~~-~~~D~v   61 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRRGH-------YLIGVSRQQ--STCEK----AVERQL----VDEAGQDLSLL-QTAKII   61 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHH----HHHTTS----CSEEESCGGGG-TTCSEE
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHH----HHhCCC----CccccCCHHHh-CCCCEE
Confidence            4899999 79999999999988663       799999874  33321    211111    01234566677 999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |++...                ..++++++.+..+.+++.+|+.+++
T Consensus        62 i~av~~----------------~~~~~~~~~l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           62 FLCTPI----------------QLILPTLEKLIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             EECSCH----------------HHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             EEECCH----------------HHHHHHHHHHHhhCCCCCEEEECCC
Confidence            998521                1344566667666556666655543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.74  E-value=9.7e-05  Score=65.33  Aligned_cols=151  Identities=15%  Similarity=0.160  Sum_probs=82.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh---hHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG---VKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~---~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       +|.+.++++  +.++.   ...|+.+....  ..  ......+.+.
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~Dl~d~~~v--~~--~~~~~~~~~g   86 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-------KVAITYRSG--EPPEGFLAVKCDITDTEQV--EQ--AYKEIEETHG   86 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSS--CCCTTSEEEECCTTSHHHH--HH--HHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCh--HhhccceEEEecCCCHHHH--HH--HHHHHHHHcC
Confidence            346899999999999999999998873       789999874  22221   11233221100  00  0001122344


Q ss_pred             CCcEEEEeCCCCCCC------CCCHHHHHHhhHHHHHHHH----HHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022           81 GVNIAVMVGGFPRKE------GMERKDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA  150 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~------~~~r~~~~~~n~~i~~~i~----~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~  150 (332)
                      ..|++|+.||.....      ..+....+..|+.....+.    +.+.+..  .++||++|.-......         |.
T Consensus        87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--~g~iv~isS~~~~~~~---------~~  155 (253)
T 2nm0_A           87 PVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK--KGRVVLISSVVGLLGS---------AG  155 (253)
T ss_dssp             SCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEECCCCCCCCH---------HH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEECchhhCCCC---------CC
Confidence            679999999975321      1234556677776544444    4444433  3577777754322100         00


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ...++.++.....+-+.+++.++  +..|+
T Consensus       156 ~~~Y~asK~a~~~~~~~la~e~~--~~gi~  183 (253)
T 2nm0_A          156 QANYAASKAGLVGFARSLARELG--SRNIT  183 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHC--SSSEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence            00123333334456666777664  45665

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.74  E-value=2e-05  Score=69.23  Aligned_cols=158  Identities=14%  Similarity=0.130  Sum_probs=82.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~~al   79 (332)
                      +.++|.|+||+|++|++++..|+..|.       +|+++|++. .+.++....++.... ....-+... +   +..+++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-------~V~~~~r~~-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~   76 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-------KVGLHGRKA-PANIDETIASMRADG-GDAAFFAADLATSEACQQLV   76 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC-CTTHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEECCCc-hhhHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHH
Confidence            457899999999999999999998763       789999872 123332223332211 000000010 1   122333


Q ss_pred             C-------CCcEEEEeCCC-CCC-C--CCC---HHHHHHhhHHHHHHHHH----HHHhhc---CCCeEEEEecCcccchH
Q 020022           80 T-------GVNIAVMVGGF-PRK-E--GME---RKDVMSKNVSIYKAQAS----ALEQHA---APNCKVLVVANPANTNA  138 (332)
Q Consensus        80 ~-------~aDiVi~~ag~-~~~-~--~~~---r~~~~~~n~~i~~~i~~----~i~~~~---~~~~~viv~tNP~~~~~  138 (332)
                      +       +.|+||+.||. ... +  ..+   ....+..|+.....+.+    .+.+..   .+..++|+++.-...  
T Consensus        77 ~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~--  154 (258)
T 3afn_B           77 DEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGH--  154 (258)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHH--
T ss_pred             HHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhc--
Confidence            3       79999999996 321 1  122   23345566654444433    443321   112567666643211  


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                           . .+.|....++.++.....+.+.+++.+.  +..|+
T Consensus       155 -----~-~~~~~~~~Y~~sK~a~~~~~~~~~~e~~--~~gi~  188 (258)
T 3afn_B          155 -----T-GGGPGAGLYGAAKAFLHNVHKNWVDFHT--KDGVR  188 (258)
T ss_dssp             -----H-CCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -----c-CCCCCchHHHHHHHHHHHHHHHHHHhhc--ccCeE
Confidence                 1 1223223455555555666666776653  33454

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.74  E-value=0.00029  Score=65.29  Aligned_cols=155  Identities=14%  Similarity=0.091  Sum_probs=85.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch-hh----hhhhHHHHhhhhcC---CccceEeeCChh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-EA----LNGVKMELVDAAFP---LLKGVVATTDAV   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~----l~~~~~dl~~~~~~---~~~~~~~~~~~~   76 (332)
                      .++|.|+||+|.+|.+++..|+..|.       +|++.++++.. +.    ++....++......   ...+++...+..
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~Ga-------~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKDGA-------NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQIS  117 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHCCC-------EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence            36899999999999999999998874       79999987531 01    11122222221100   000000000111


Q ss_pred             hh-------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHH
Q 020022           77 EA-------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALIL  141 (332)
Q Consensus        77 ~a-------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~  141 (332)
                      ++       +.+.|++|+.||.....   ..+   .+..+..|+.....+.+.+..+-  .+.+.||++|.+......  
T Consensus       118 ~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~--  195 (346)
T 3kvo_A          118 AAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV--  195 (346)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG--
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC--
Confidence            22       34789999999975322   122   23456777765555555443221  123678888866542110  


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                           .++..-.++.++.--..+-+.+++.++
T Consensus       196 -----~~~~~~~Y~aSKaal~~l~~~la~e~~  222 (346)
T 3kvo_A          196 -----WFKQHCAYTIAKYGMSMYVLGMAEEFK  222 (346)
T ss_dssp             -----GTSSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence                 012122345555555677788888887

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.74  E-value=0.00015  Score=65.00  Aligned_cols=156  Identities=13%  Similarity=0.089  Sum_probs=84.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc--------------hhhhhhhHHHHhhhhcCCccceE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--------------AEALNGVKMELVDAAFPLLKGVV   70 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~--------------~~~l~~~~~dl~~~~~~~~~~~~   70 (332)
                      .+++.|+||+|.+|.+++..|+..|.       .++++|+++.              .+.++.....+.... ....-+.
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~G~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   82 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQEGA-------DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-RRIVTAE   82 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-CCEEEEE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-CceEEEE
Confidence            46899999999999999999999874       7999998621              122222222222111 0000011


Q ss_pred             ee-CC---hhh-------hcCCCcEEEEeCCCCCCCC----CCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEE
Q 020022           71 AT-TD---AVE-------ACTGVNIAVMVGGFPRKEG----MER---KDVMSKNVSI----YKAQASALEQHAAPNCKVL  128 (332)
Q Consensus        71 ~~-~~---~~~-------al~~aDiVi~~ag~~~~~~----~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~vi  128 (332)
                      .. ++   ..+       .+...|++|+.||......    .+.   ...+..|+.-    ++.+.+.+.+.. +.+.||
T Consensus        83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv  161 (286)
T 3uve_A           83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG-RGGSII  161 (286)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCcEEE
Confidence            11 11   112       2237899999999754322    233   3345666644    444455555543 246787


Q ss_pred             EecCcccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          129 VVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       129 v~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ++|.....         .+.|..-.++.++.--..+-+.++..++  +..|+
T Consensus       162 ~isS~~~~---------~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gI~  202 (286)
T 3uve_A          162 LTSSVGGL---------KAYPHTGHYVAAKHGVVGLMRAFGVELG--QHMIR  202 (286)
T ss_dssp             EECCGGGT---------SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             EECchhhc---------cCCCCccHHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence            87754331         1223222344555545566667777664  34555

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=97.72  E-value=0.00019  Score=69.56  Aligned_cols=100  Identities=8%  Similarity=0.054  Sum_probs=63.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--   80 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--   80 (332)
                      +.++||+||| .|.||.+++..|+..|.       +|.++|+++  ++++.    +.... ....++..+.+..++++  
T Consensus         2 ~~~~kIgiIG-lG~MG~~lA~~L~~~G~-------~V~v~dr~~--~~~~~----l~~~g-~~g~~i~~~~s~~e~v~~l   66 (484)
T 4gwg_A            2 NAQADIALIG-LAVMGQNLILNMNDHGF-------VVCAFNRTV--SKVDD----FLANE-AKGTKVVGAQSLKEMVSKL   66 (484)
T ss_dssp             -CCBSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSST--HHHHH----HHHTT-TTTSSCEECSSHHHHHHTB
T ss_pred             CCCCEEEEEC-hhHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHH----HHhcc-cCCCceeccCCHHHHHhhc
Confidence            3567999999 79999999999998763       699999985  33322    22110 01123444455666554  


Q ss_pred             -CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           81 -GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        81 -~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                       ++|+||++...+               +.++++++.+..+..++.+||..||
T Consensus        67 ~~aDvVil~Vp~~---------------~~v~~vl~~l~~~L~~g~iIId~st  104 (484)
T 4gwg_A           67 KKPRRIILLVKAG---------------QAVDDFIEKLVPLLDTGDIIIDGGN  104 (484)
T ss_dssp             CSSCEEEECSCSS---------------HHHHHHHHHHGGGCCTTCEEEECSC
T ss_pred             cCCCEEEEecCCh---------------HHHHHHHHHHHHhcCCCCEEEEcCC
Confidence             699999985321               1233445566666556677777776

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.72  E-value=2.9e-05  Score=70.05  Aligned_cols=96  Identities=15%  Similarity=0.072  Sum_probs=56.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC-c---h-hhhhhhHHHHhhhhcC-CccceEeeCChhhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-A---A-EALNGVKMELVDAAFP-LLKGVVATTDAVEA   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-~---~-~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~a   78 (332)
                      ++||+|+||+|++|++++..|+..|.       +++++++++ .   . ++++. ..++...... ...++.-...+.++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~~~~-~~~l~~~~v~~v~~D~~d~~~l~~~   73 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-------PTYALVRKTITAANPETKEEL-IDNYQSLGVILLEGDINDHETLVKA   73 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-------CEEEEECCSCCSSCHHHHHHH-HHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-------cEEEEECCCcccCChHHHHHH-HHHHHhCCCEEEEeCCCCHHHHHHH
Confidence            45899999999999999999998763       578888764 1   0 22211 1122111100 00011111235678


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA  121 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~  121 (332)
                      ++++|+||+++|...             ....+.+++.+++.+
T Consensus        74 ~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g  103 (307)
T 2gas_A           74 IKQVDIVICAAGRLL-------------IEDQVKIIKAIKEAG  103 (307)
T ss_dssp             HTTCSEEEECSSSSC-------------GGGHHHHHHHHHHHC
T ss_pred             HhCCCEEEECCcccc-------------cccHHHHHHHHHhcC
Confidence            899999999998652             122345666666654

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=97.72  E-value=0.00063  Score=60.79  Aligned_cols=95  Identities=18%  Similarity=0.212  Sum_probs=58.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC-CCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-GVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~-~aDi   84 (332)
                      +||+||| +|.+|..++..|...|..     .+|.++|+++  ++++.    +....  .  ....+++..++++ +||+
T Consensus         2 ~~I~iIG-~G~mG~~~a~~l~~~g~~-----~~V~~~d~~~--~~~~~----~~~~g--~--~~~~~~~~~~~~~~~aDv   65 (281)
T 2g5c_A            2 QNVLIVG-VGFMGGSFAKSLRRSGFK-----GKIYGYDINP--ESISK----AVDLG--I--IDEGTTSIAKVEDFSPDF   65 (281)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCC-----SEEEEECSCH--HHHHH----HHHTT--S--CSEEESCGGGGGGTCCSE
T ss_pred             cEEEEEe-cCHHHHHHHHHHHhcCCC-----cEEEEEeCCH--HHHHH----HHHCC--C--cccccCCHHHHhcCCCCE
Confidence            5899999 799999999999876531     1689999874  33321    11111  0  0123456668888 9999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ||++....                ...+++..+..+..++++|+.++|
T Consensus        66 Vilavp~~----------------~~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           66 VMLSSPVR----------------TFREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             EEECSCHH----------------HHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             EEEcCCHH----------------HHHHHHHHHHhhCCCCcEEEECCC
Confidence            99984211                122444445544446666666555

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.72  E-value=0.00017  Score=65.34  Aligned_cols=156  Identities=10%  Similarity=0.096  Sum_probs=85.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc----------hhhhhhhHHHHhhhhcCCccceEee-C
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA----------AEALNGVKMELVDAAFPLLKGVVAT-T   73 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~----------~~~l~~~~~dl~~~~~~~~~~~~~~-~   73 (332)
                      .+++.|+||+|.+|.+++..|+..|.       .++++|+++.          .+.+.....++..... ...-+... +
T Consensus        28 gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~   99 (299)
T 3t7c_A           28 GKVAFITGAARGQGRSHAITLAREGA-------DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVR   99 (299)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCC
Confidence            46899999999999999999999874       7899998631          2223222223322110 00000110 1


Q ss_pred             C---hhh-------hcCCCcEEEEeCCCCCCCC----CCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022           74 D---AVE-------ACTGVNIAVMVGGFPRKEG----MER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        74 ~---~~~-------al~~aDiVi~~ag~~~~~~----~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +   ..+       .+...|++|+.||......    .+.   +..+..|+..    ++.+.+.+.+.. +.+.||++|.
T Consensus       100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~~g~Iv~isS  178 (299)
T 3t7c_A          100 DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGK-RGGSIVFTSS  178 (299)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-SCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEECC
Confidence            1   112       2347899999999754221    233   3455666644    444455555443 3467878775


Q ss_pred             cccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          133 PANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       133 P~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      -...         .+.+..-.++.++.--..+-+.++..++  +..|+
T Consensus       179 ~~~~---------~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  215 (299)
T 3t7c_A          179 IGGL---------RGAENIGNYIASKHGLHGLMRTMALELG--PRNIR  215 (299)
T ss_dssp             GGGT---------SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             hhhc---------cCCCCcchHHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence            4321         1223222345555555566777777764  34555

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.72  E-value=0.00056  Score=60.98  Aligned_cols=157  Identities=18%  Similarity=0.169  Sum_probs=88.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC-----------chhhhhhhHHHHhhhhcCCccceEee
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-----------AAEALNGVKMELVDAAFPLLKGVVAT   72 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-----------~~~~l~~~~~dl~~~~~~~~~~~~~~   72 (332)
                      ..+++.|+||+|.+|.+++..|+..|.       ++.++|+++           +.+.++....++.... ....-+...
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D   81 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-------DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-RRIVAAVVD   81 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-------EEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECC
Confidence            346899999999999999999999874       789998841           1233332222222211 000000110


Q ss_pred             -CC---hh-------hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEec
Q 020022           73 -TD---AV-------EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        73 -~~---~~-------~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                       ++   ..       +.+...|++|+.||.....   ..+.   +..+..|+.    .++.+.+.+.+.. +.+.||++|
T Consensus        82 ~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~~g~iv~is  160 (277)
T 3tsc_A           82 TRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGG-RGGSIILIS  160 (277)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CCCEEEEEc
Confidence             11   11       2234689999999986432   2233   334566654    4555566666654 346788887


Q ss_pred             CcccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          132 NPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       132 NP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .-...         .+.|..-.++.++.-...+-+.+++.++  +..|+
T Consensus       161 S~~~~---------~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  198 (277)
T 3tsc_A          161 SAAGM---------KMQPFMIHYTASKHAVTGLARAFAAELG--KHSIR  198 (277)
T ss_dssp             CGGGT---------SCCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             cHhhC---------CCCCCchhhHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence            54331         1223222355555555677777777765  34565

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=97.72  E-value=0.0002  Score=65.59  Aligned_cols=98  Identities=14%  Similarity=0.109  Sum_probs=62.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeC--CCchhhhhhhHHHHhhhhc-C-Cc---cceEeeC--Chh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI--PPAAEALNGVKMELVDAAF-P-LL---KGVVATT--DAV   76 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~--~~~~~~l~~~~~dl~~~~~-~-~~---~~~~~~~--~~~   76 (332)
                      |||+||| +|.+|+.++..|+..|.       ++.++|+  ++  ++++.    +..... . ..   .++..++  +..
T Consensus         1 m~I~iiG-~G~mG~~~a~~L~~~g~-------~V~~~~r~~~~--~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~   66 (335)
T 1txg_A            1 MIVSILG-AGAMGSALSVPLVDNGN-------EVRIWGTEFDT--EILKS----ISAGREHPRLGVKLNGVEIFWPEQLE   66 (335)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCC-------EEEEECCGGGH--HHHHH----HHTTCCBTTTTBCCCSEEEECGGGHH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEEccCCH--HHHHH----HHHhCcCcccCccccceEEecHHhHH
Confidence            4899999 69999999999988763       7999998  53  33321    211100 0 00   2345555  566


Q ss_pred             hhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           77 EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      ++++++|+||++....                .+.++.+.+.. ..++..|+.++|.+
T Consensus        67 ~~~~~~D~vi~~v~~~----------------~~~~v~~~i~~-l~~~~~vv~~~ng~  107 (335)
T 1txg_A           67 KCLENAEVVLLGVSTD----------------GVLPVMSRILP-YLKDQYIVLISKGL  107 (335)
T ss_dssp             HHHTTCSEEEECSCGG----------------GHHHHHHHHTT-TCCSCEEEECCCSE
T ss_pred             HHHhcCCEEEEcCChH----------------HHHHHHHHHhc-CCCCCEEEEEcCcC
Confidence            7889999999985321                12344455555 44566677777766

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.72  E-value=5.1e-05  Score=68.25  Aligned_cols=155  Identities=14%  Similarity=0.112  Sum_probs=85.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhh----
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE----   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~----   77 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++......   ...+++...+..+    
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   78 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGA-------KVVVTARNG--NALAELTDEIAGGGGEAAALAGDVGDEALHEALVEL   78 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-------EEEECCSCH--HHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            46899999999999999999999874       799999874  4444333333221100   0001100011112    


Q ss_pred             ---hcCCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           78 ---ACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        78 ---al~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                         .+...|++|+.||.....    ..+.   ...+..|+.-    .+.+.+.+.+..  .+.||++|.....       
T Consensus        79 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~-------  149 (280)
T 3tox_A           79 AVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG--GGSLTFTSSFVGH-------  149 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEEECCSBTT-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CCEEEEEcChhhC-------
Confidence               234789999999975321    1232   3445566544    444455555443  3677777754321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       ..+.+....++.++.-...+-+.++..++  +..|+
T Consensus       150 -~~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gIr  183 (280)
T 3tox_A          150 -TAGFAGVAPYAASKAGLIGLVQALAVELG--ARGIR  183 (280)
T ss_dssp             -TBCCTTCHHHHHHHHHHHHHHHHHHHHHH--TTTEE
T ss_pred             -cCCCCCchhHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence             01223222345555555566677777764  34555

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.71  E-value=0.00026  Score=61.35  Aligned_cols=117  Identities=20%  Similarity=0.186  Sum_probs=65.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc----cceEeeCChhhhc-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL----KGVVATTDAVEAC-   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~----~~~~~~~~~~~al-   79 (332)
                      ++++.|+||+|.+|.+++..|+..|.       +|.+.+++.  ++++....++........    .+++...+..+++ 
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   72 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-------ALALGARSV--DRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSK   72 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHH
Confidence            35799999999999999999998874       799999874  445444444431111100    0110011122233 


Q ss_pred             ------CCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCc
Q 020022           80 ------TGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        80 ------~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                            ...|++|+.||......   .+.   ...+..|+...    +.+.+.+++.  . ..+|+++..
T Consensus        73 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~-~~ii~~sS~  139 (235)
T 3l77_A           73 KVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--G-GLALVTTSD  139 (235)
T ss_dssp             -HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--T-CEEEEECCG
T ss_pred             HHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--C-CcEEEEecc
Confidence                  37899999999854221   232   33455665444    4444444332  2 345555543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.71  E-value=0.00012  Score=64.56  Aligned_cols=150  Identities=19%  Similarity=0.176  Sum_probs=81.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh---
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA---   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a---   78 (332)
                      +++.|+||+|.+|.+++..|+..|.       +|++.|+++..+.++....++.... ....-+... ++   ..++   
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~   74 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGF-------DIAVADLPQQEEQAAETIKLIEAAD-QKAVFVGLDVTDKANFDSAIDE   74 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-------EEEEEECGGGHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCcchHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHH
Confidence            5799999999999999999998874       7899998752111332223332211 000001110 11   1122   


Q ss_pred             ----cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           79 ----CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        79 ----l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                          +...|++|+.||.....   ..+   ....+..|+..    ++.+.+.+.+.. ..+.||++|.....        
T Consensus        75 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~--------  145 (258)
T 3a28_C           75 AAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAI--------  145 (258)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGT--------
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhc--------
Confidence                23789999999975422   123   23445666654    444455554443 21567777754321        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                       .+.|....++.++.-...+-+.++..++
T Consensus       146 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~  173 (258)
T 3a28_C          146 -QGFPILSAYSTTKFAVRGLTQAAAQELA  173 (258)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -cCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence             1223222344455555566666776664

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=97.71  E-value=9.5e-05  Score=68.16  Aligned_cols=102  Identities=18%  Similarity=0.129  Sum_probs=61.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~a   82 (332)
                      +++||+||| +|.+|++++..|+..|.       +|.++|+++  ++++.....-.....+. ..++..+++..+ ++++
T Consensus        13 ~~~kI~iIG-~G~mG~ala~~L~~~G~-------~V~~~~r~~--~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~a   81 (335)
T 1z82_A           13 MEMRFFVLG-AGSWGTVFAQMLHENGE-------EVILWARRK--EIVDLINVSHTSPYVEESKITVRATNDLEE-IKKE   81 (335)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSH--HHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTT
T ss_pred             cCCcEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCC
Confidence            468999999 69999999999998763       799999873  33332211100000000 003455666667 8999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      |+||++...     .           .++++++.+..   ++..+|.++|.++
T Consensus        82 DvVil~vk~-----~-----------~~~~v~~~l~~---~~~~vv~~~nGi~  115 (335)
T 1z82_A           82 DILVIAIPV-----Q-----------YIREHLLRLPV---KPSMVLNLSKGIE  115 (335)
T ss_dssp             EEEEECSCG-----G-----------GHHHHHTTCSS---CCSEEEECCCCCC
T ss_pred             CEEEEECCH-----H-----------HHHHHHHHhCc---CCCEEEEEeCCCC
Confidence            999998421     1           12333333332   4567777888654

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=97.71  E-value=0.00039  Score=66.29  Aligned_cols=109  Identities=16%  Similarity=0.221  Sum_probs=70.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--------------ccceEe
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------LKGVVA   71 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--------------~~~~~~   71 (332)
                      .|.+||| .|.||..+|..|+..|.       +++.+|+++  ++.+    .|.....+.              ..++..
T Consensus        12 ~~~~ViG-lGyvGlp~A~~La~~G~-------~V~~~D~~~--~kv~----~L~~g~~pi~epgl~~ll~~~~~~g~l~~   77 (431)
T 3ojo_A           12 SKLTVVG-LGYIGLPTSIMFAKHGV-------DVLGVDINQ--QTID----KLQNGQISIEEPGLQEVYEEVLSSGKLKV   77 (431)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTC-------EEEEECSCH--HHHH----HHHTTCCSSCCTTHHHHHHHHHHTTCEEE
T ss_pred             CccEEEe-eCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHH----HHHCCCCCcCCCCHHHHHHhhcccCceEE
Confidence            5899999 79999999999998874       899999984  4433    232221111              235666


Q ss_pred             eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-Ccccc
Q 020022           72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANT  136 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~  136 (332)
                      +++    +++||+||++.+.|...+...    ..++..++..++.|.++..++.+||..| -|...
T Consensus        78 ttd----~~~aDvvii~VpTp~~~~~~~----~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgt  135 (431)
T 3ojo_A           78 STT----PEASDVFIIAVPTPNNDDQYR----SCDISLVMRALDSILPFLKKGNTIIVESTIAPKT  135 (431)
T ss_dssp             ESS----CCCCSEEEECCCCCBCSSSSC----BBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTH
T ss_pred             eCc----hhhCCEEEEEeCCCccccccC----CccHHHHHHHHHHHHHhCCCCCEEEEecCCChhH
Confidence            665    468999999988875432000    1234455566677777665666555543 45554

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=97.71  E-value=0.00026  Score=68.55  Aligned_cols=99  Identities=13%  Similarity=-0.001  Sum_probs=64.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG---   81 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~---   81 (332)
                      ++||+||| +|.+|+.++..|+..|.       +|.++|+++  ++++.......      ...+..+.+..+++++   
T Consensus         5 ~~~IgvIG-~G~mG~~lA~~L~~~G~-------~V~v~dr~~--~~~~~l~~~~~------~~gi~~~~s~~e~v~~l~~   68 (474)
T 2iz1_A            5 QANFGVVG-MAVMGKNLALNVESRGY-------TVAIYNRTT--SKTEEVFKEHQ------DKNLVFTKTLEEFVGSLEK   68 (474)
T ss_dssp             TBSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSSH--HHHHHHHHHTT------TSCEEECSSHHHHHHTBCS
T ss_pred             CCcEEEEe-eHHHHHHHHHHHHhCCC-------EEEEEcCCH--HHHHHHHHhCc------CCCeEEeCCHHHHHhhccC
Confidence            46899999 79999999999998763       689999874  33332211110      1235555667776665   


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      +|+||++...+               ..++++++.+.....|+.+||..+|..
T Consensus        69 aDvVilavp~~---------------~~v~~vl~~l~~~l~~g~iiId~s~~~  106 (474)
T 2iz1_A           69 PRRIMLMVQAG---------------AATDATIKSLLPLLDIGDILIDGGNTH  106 (474)
T ss_dssp             SCEEEECCCTT---------------HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             CCEEEEEccCc---------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence            99999985321               123344456666655666677777754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.71  E-value=4.4e-05  Score=67.68  Aligned_cols=154  Identities=12%  Similarity=0.076  Sum_probs=85.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a   78 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       ++++. ++++  +.++....++...... ..-+... ++   ..++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~vv~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~   72 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-------NIVINYARSK--KAALETAEEIEKLGVK-VLVVKANVGQPAKIKEM   72 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESSCH--HHHHHHHHHHHTTTCC-EEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcCCc-EEEEEcCCCCHHHHHHH
Confidence            346899999999999999999998874       67775 6653  3443333333321100 0001110 11   1122


Q ss_pred             -------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHH----HHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           79 -------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYK----AQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        79 -------l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~----~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                             +...|++|+.||.....   ..+.   +..+..|+....    .+.+.+++..  .+.||++|.-...     
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~--~g~iv~isS~~~~-----  145 (258)
T 3oid_A           73 FQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG--GGHIVSISSLGSI-----  145 (258)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT--CEEEEEEEEGGGT-----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEECchhhC-----
Confidence                   23569999999975422   1232   234566665444    4444445432  4677777653321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.+....++.++.-...+-+.++..++  +..|+
T Consensus       146 ----~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~  178 (258)
T 3oid_A          146 ----RYLENYTTVGVSKAALEALTRYLAVELS--PKQII  178 (258)
T ss_dssp             ----SBCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEE
T ss_pred             ----CCCCCcHHHHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence                1223222455556555677777887764  44565

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.70  E-value=0.00077  Score=59.07  Aligned_cols=148  Identities=17%  Similarity=0.145  Sum_probs=81.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE--   77 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~--   77 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.... ....-+... ++   ..+  
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~~~~~~   75 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-------AVAIAARRV--EKLRALGDELTAAG-AKVHVLELDVADRQGVDAAV   75 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHH
Confidence            346899999999999999999998874       789999874  44443333333211 000001111 11   111  


Q ss_pred             -----hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHH----HHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           78 -----ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        78 -----al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~----~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                           .+...|++|+.||.....   ..+.   ...+..|+.....+.    +.+.+.  + +.||++|.-...      
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~-g~iv~isS~~~~------  146 (247)
T 2jah_A           76 ASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS--K-GTVVQMSSIAGR------  146 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--T-CEEEEECCGGGT------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--C-CEEEEEccHHhc------
Confidence                 234789999999975321   1233   334566665444444    444333  2 467777753321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                         .+.|..-.++.++.....+-+.+++.+.
T Consensus       147 ---~~~~~~~~Y~asK~a~~~~~~~la~e~~  174 (247)
T 2jah_A          147 ---VNVRNAAVYQATKFGVNAFSETLRQEVT  174 (247)
T ss_dssp             ---CCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---CCCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence               1222222344444444456666666654

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.70  E-value=7.7e-05  Score=65.46  Aligned_cols=155  Identities=17%  Similarity=0.139  Sum_probs=84.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       ++++.++.. ++.++....++.... ....-+... ++   ..++ 
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-------~V~~~~r~~-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~   73 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-------NVVVNYAGN-EQKANEVVDEIKKLG-SDAIAVRADVANAEDVTNMV   73 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHH
Confidence            456899999999999999999998763       788988821 233433333332211 000001110 11   1222 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                            +.+.|++|+.||.....   ..+   ....+..|+..    .+.+.+.+++..  ...||++|.....      
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------  145 (246)
T 2uvd_A           74 KQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR--HGRIVNIASVVGV------  145 (246)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCTHHH------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CcEEEEECCHHhc------
Confidence                  23799999999976422   122   23455667655    556666666553  3577777753221      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .  +.|....++.++..-..+-+.+++.+.  +..|+
T Consensus       146 -~--~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  178 (246)
T 2uvd_A          146 -T--GNPGQANYVAAKAGVIGLTKTSAKELA--SRNIT  178 (246)
T ss_dssp             -H--CCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -C--CCCCCchHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence             1  122222344444444455666666654  34555

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.70  E-value=0.00026  Score=63.12  Aligned_cols=156  Identities=15%  Similarity=0.115  Sum_probs=84.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc----------hhhhhhhHHHHhhhhcCCccceEee-C
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA----------AEALNGVKMELVDAAFPLLKGVVAT-T   73 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~----------~~~l~~~~~dl~~~~~~~~~~~~~~-~   73 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|+++|+++.          .+.++....++.... ....-+... +
T Consensus        13 gk~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~   84 (278)
T 3sx2_A           13 GKVAFITGAARGQGRAHAVRLAADGA-------DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-SRIVARQADVR   84 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT-CCEEEEECCTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEecccccccccccccchHHHHHHHHHHHhcC-CeEEEEeCCCC
Confidence            46899999999999999999998874       7999998621          223322222222211 000000110 1


Q ss_pred             ---Chhhhc-------CCCcEEEEeCCCCCCCC--CCHHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccch
Q 020022           74 ---DAVEAC-------TGVNIAVMVGGFPRKEG--MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTN  137 (332)
Q Consensus        74 ---~~~~al-------~~aDiVi~~ag~~~~~~--~~r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~  137 (332)
                         +..+++       ...|++|+.||......  .+....+..|+.-    ++.+.+.+.+.. +.+.||++|.-....
T Consensus        85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~g~iv~isS~~~~~  163 (278)
T 3sx2_A           85 DRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQG-TGGSIVLISSSAGLA  163 (278)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-SCEEEEEECCGGGTS
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCcEEEEEccHHhcC
Confidence               112222       37899999999864322  1223455666644    444455555543 346777777543210


Q ss_pred             HHHHHHhCCCC--C-CCc-EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          138 ALILKEFAPSI--P-AKN-ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       138 ~~~~~~~~~~~--~-~~~-i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                               +.  + +.. .++.++.-...+-+.++..++  +..|+
T Consensus       164 ---------~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  199 (278)
T 3sx2_A          164 ---------GVGSADPGSVGYVAAKHGVVGLMRVYANLLA--GQMIR  199 (278)
T ss_dssp             ---------CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---------CCccCCCCchHhHHHHHHHHHHHHHHHHHHh--ccCcE
Confidence                     11  0 111 234444444566667777665  34555

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.70  E-value=0.00028  Score=62.03  Aligned_cols=146  Identities=16%  Similarity=0.169  Sum_probs=82.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCCh---hhhcCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA---VEACTG   81 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~---~~al~~   81 (332)
                      .++|.|+||+|++|.+++..|+..|.       +|++.|+++  +.++    ++.... .. .++  ..+.   .+.+.+
T Consensus        19 ~k~vlVTGas~gIG~~~a~~l~~~G~-------~V~~~~r~~--~~~~----~~~~~~-~~-~D~--~~~~~~~~~~~~~   81 (249)
T 1o5i_A           19 DKGVLVLAASRGIGRAVADVLSQEGA-------EVTICARNE--ELLK----RSGHRY-VV-CDL--RKDLDLLFEKVKE   81 (249)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHH----HTCSEE-EE-CCT--TTCHHHHHHHSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHH----hhCCeE-EE-eeH--HHHHHHHHHHhcC
Confidence            47899999999999999999998763       799999873  2221    110000 00 011  1122   233448


Q ss_pred             CcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCC
Q 020022           82 VNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAK  151 (332)
Q Consensus        82 aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~  151 (332)
                      .|++|+.||.....   ..+.   ...+..|+.    ..+.+.+.+.+..  ...||++|.....         .+.+..
T Consensus        82 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~---------~~~~~~  150 (249)
T 1o5i_A           82 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG--WGRIVAITSFSVI---------SPIENL  150 (249)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT---------SCCTTB
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CcEEEEEcchHhc---------CCCCCC
Confidence            99999999975422   1222   234455553    3556666666653  3577777754321         112222


Q ss_pred             cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          152 NITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..++.++.....+-+.+++.+.  +..|+
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~--~~gi~  177 (249)
T 1o5i_A          151 YTSNSARMALTGFLKTLSFEVA--PYGIT  177 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             chHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence            2344444444556666666653  34454

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.69  E-value=0.00019  Score=64.45  Aligned_cols=162  Identities=14%  Similarity=0.126  Sum_probs=88.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch-h----hhhhhHHHHhhhhcCCccceEee-CC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-E----ALNGVKMELVDAAFPLLKGVVAT-TD   74 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~----~l~~~~~dl~~~~~~~~~~~~~~-~~   74 (332)
                      |+.+.+++.|+||+|.+|.+++..|+..|.       +|++.|+++.. +    .++....++..... ...-+... ++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~   76 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGA-------NVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRD   76 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTC-------EEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTS
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence            445567899999999999999999998764       79999987521 0    12222222322110 00000000 11


Q ss_pred             ---hh-------hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcC--CCeEEEEecCcccc
Q 020022           75 ---AV-------EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANT  136 (332)
Q Consensus        75 ---~~-------~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~--~~~~viv~tNP~~~  136 (332)
                         ..       +.+...|++|+.||.....   ..+.   ...+..|+.....+.+.+...-.  +.+.||++|.....
T Consensus        77 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~  156 (285)
T 3sc4_A           77 GDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRL  156 (285)
T ss_dssp             HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhc
Confidence               11       2233789999999976422   2232   34556788776666666654421  23577787754321


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..        .++....++.++.--..+-+.+++.++  +..|+
T Consensus       157 ~~--------~~~~~~~Y~asKaal~~~~~~la~e~~--~~gI~  190 (285)
T 3sc4_A          157 EP--------KWLRPTPYMMAKYGMTLCALGIAEELR--DAGIA  190 (285)
T ss_dssp             SG--------GGSCSHHHHHHHHHHHHHHHHHHHHTG--GGTCE
T ss_pred             cC--------CCCCCchHHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence            10        001111234444444566667777664  34454

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.69  E-value=8.7e-05  Score=66.23  Aligned_cols=150  Identities=19%  Similarity=0.177  Sum_probs=82.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       .+.+.|+.. .+.++....++...... ..-+... ++   ..++ 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-------~V~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~D~~d~~~v~~~~   97 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-------KVAVNYASS-AGAADEVVAAIAAAGGE-AFAVKADVSQESEVEALF   97 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHTTCC-EEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCC-hHHHHHHHHHHHhcCCc-EEEEECCCCCHHHHHHHH
Confidence            346899999999999999999999874       688888743 23333333333321100 0001110 11   1122 


Q ss_pred             ------cCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           79 ------CTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                            +...|++|+.||......   .+.   +..+..|+..    .+.+.+.+.+..  .+.||++|.-..       
T Consensus        98 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~-------  168 (269)
T 4dmm_A           98 AAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR--SGRIINIASVVG-------  168 (269)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECCHHH-------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CcEEEEECchhh-------
Confidence                  237899999999864321   232   3345666654    444455555543  356777774221       


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      ..  +.+....++.++.--..+-+.++..++
T Consensus       169 ~~--~~~~~~~Y~asK~a~~~l~~~la~e~~  197 (269)
T 4dmm_A          169 EM--GNPGQANYSAAKAGVIGLTKTVAKELA  197 (269)
T ss_dssp             HH--CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             cC--CCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence            11  223222455555555567777777664

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.69  E-value=0.00014  Score=64.23  Aligned_cols=119  Identities=10%  Similarity=0.060  Sum_probs=68.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|+++|+++  +.++....++.... ....-+... ++   ..++ 
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~   74 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-------RVVITGRTK--EKLEEAKLEIEQFP-GQILTVQMDVRNTDDIQKMI   74 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCCST-TCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHH
Confidence            456899999999999999999999874       799999874  44443333332211 000001110 11   1122 


Q ss_pred             ------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCc
Q 020022           79 ------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP  133 (332)
                            +...|++|+.||.....   ..+.   +..+..|+.....+    .+.+.+.. +.+.||++|..
T Consensus        75 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~  144 (257)
T 3imf_A           75 EQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKG-IKGNIINMVAT  144 (257)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CCCEEEEECCG
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhC-CCcEEEEECch
Confidence                  23789999999975421   1232   34456666544444    44443333 24567777754

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.68  E-value=0.00012  Score=64.56  Aligned_cols=155  Identities=12%  Similarity=0.115  Sum_probs=85.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh---
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV---   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~---   76 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       .+.+.+... .+.......++...... ..-+... ++   ..   
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~   82 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGF-------RVVAGCGPN-SPRRVKWLEDQKALGFD-FYASEGNVGDWDSTKQAF   82 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTE-------EEEEEECTT-CSSHHHHHHHHHHTTCC-CEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcCCe-eEEEecCCCCHHHHHHHH
Confidence            357899999999999999999998874       677877332 22333233333221110 0000100 11   11   


Q ss_pred             ----hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           77 ----EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        77 ----~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                          +.+...|++|+.||.....   ..+.   ...+..|+..    .+.+.+.+.+..  .++||++|.....      
T Consensus        83 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~------  154 (256)
T 3ezl_A           83 DKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG--WGRIINISSVNGQ------  154 (256)
T ss_dssp             HHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCCCGG------
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCEEEEEcchhhc------
Confidence                2233789999999976422   1232   3455666655    555566666654  3677788764432      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+....++.++.-...+-+.+++.+.  +..|+
T Consensus       155 ---~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  187 (256)
T 3ezl_A          155 ---KGQFGQTNYSTAKAGIHGFTMSLAQEVA--TKGVT  187 (256)
T ss_dssp             ---GSCSCCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---cCCCCCcccHHHHHHHHHHHHHHHHHHH--HhCCE
Confidence               1223222445555555566677777664  34555

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=97.68  E-value=0.00024  Score=68.86  Aligned_cols=102  Identities=14%  Similarity=0.059  Sum_probs=63.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC---CC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---GV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~---~a   82 (332)
                      |||+||| +|.||+.++..|+..|.       +|.++|+++  ++++......  ...+...++..+++..++++   ++
T Consensus         2 MkIgVIG-~G~mG~~lA~~La~~G~-------~V~v~dr~~--~~~~~l~~~~--g~~~~~~~i~~~~~~~e~v~~l~~a   69 (478)
T 1pgj_A            2 MDVGVVG-LGVMGANLALNIAEKGF-------KVAVFNRTY--SKSEEFMKAN--ASAPFAGNLKAFETMEAFAASLKKP   69 (478)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSSH--HHHHHHHHHT--TTSTTGGGEEECSCHHHHHHHBCSS
T ss_pred             CEEEEEC-hHHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhc--CCCCCCCCeEEECCHHHHHhcccCC
Confidence            5899999 79999999999998763       689999874  3333222111  10011123556666766665   59


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      |+||++...+               ..++++++.+..+..++.+||..+|-.
T Consensus        70 DvVilaVp~~---------------~~v~~vl~~l~~~l~~g~iIId~sng~  106 (478)
T 1pgj_A           70 RKALILVQAG---------------AATDSTIEQLKKVFEKGDILVDTGNAH  106 (478)
T ss_dssp             CEEEECCCCS---------------HHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred             CEEEEecCCh---------------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence            9999985321               112334445555554566677677754

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.68  E-value=0.00015  Score=65.88  Aligned_cols=78  Identities=10%  Similarity=0.132  Sum_probs=54.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+||||+|.+|..++..|...|.       ++.++|+++  +                       .+..+++++||+|
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~-------~V~~~~~~~--~-----------------------~~~~~~~~~aDvV   69 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGY-------PISILDRED--W-----------------------AVAESILANADVV   69 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-------CEEEECTTC--G-----------------------GGHHHHHTTCSEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCC-------eEEEEECCc--c-----------------------cCHHHHhcCCCEE
Confidence            5899999569999999999998763       689999864  1                       0245678999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      |++....                .+.++++.+..+.+++++|+.++
T Consensus        70 ilavp~~----------------~~~~vl~~l~~~l~~~~iv~~~~   99 (298)
T 2pv7_A           70 IVSVPIN----------------LTLETIERLKPYLTENMLLADLT   99 (298)
T ss_dssp             EECSCGG----------------GHHHHHHHHGGGCCTTSEEEECC
T ss_pred             EEeCCHH----------------HHHHHHHHHHhhcCCCcEEEECC
Confidence            9985221                14455566666555666554443

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=97.67  E-value=5.5e-05  Score=68.20  Aligned_cols=64  Identities=19%  Similarity=0.234  Sum_probs=45.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      +|||+||| +|.+|+.++..|...|.       ++.++| ++  ++++.    +...      .+....+..++++++|+
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~-------~V~~~~-~~--~~~~~----~~~~------g~~~~~~~~~~~~~~D~   61 (295)
T 1yb4_A            3 AMKLGFIG-LGIMGSPMAINLARAGH-------QLHVTT-IG--PVADE----LLSL------GAVNVETARQVTEFADI   61 (295)
T ss_dssp             -CEEEECC-CSTTHHHHHHHHHHTTC-------EEEECC-SS--CCCHH----HHTT------TCBCCSSHHHHHHTCSE
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCCC-------EEEEEc-CH--HHHHH----HHHc------CCcccCCHHHHHhcCCE
Confidence            46999999 79999999999987653       789999 64  33321    1111      12234567788899999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||++.
T Consensus        62 vi~~v   66 (295)
T 1yb4_A           62 IFIMV   66 (295)
T ss_dssp             EEECC
T ss_pred             EEEEC
Confidence            99985

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.67  E-value=0.00012  Score=67.06  Aligned_cols=156  Identities=13%  Similarity=0.159  Sum_probs=85.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc----------hhhhhhhHHHHhhhhcCCccceEee-C
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA----------AEALNGVKMELVDAAFPLLKGVVAT-T   73 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~----------~~~l~~~~~dl~~~~~~~~~~~~~~-~   73 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +++++|++..          .+.++.....+.... ....-+... +
T Consensus        46 gk~~lVTGas~GIG~aia~~la~~G~-------~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~  117 (317)
T 3oec_A           46 GKVAFITGAARGQGRTHAVRLAQDGA-------DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-RRIIARQADVR  117 (317)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------eEEEEecccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECCCC
Confidence            46899999999999999999999874       7899987621          122222222221111 000000110 1


Q ss_pred             C---hhh-------hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCc
Q 020022           74 D---AVE-------ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        74 ~---~~~-------al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      +   ..+       .+...|++|+.||.....   ..+.   +..+..|+.-    ++.+.+.+.+.. +.+.||++|..
T Consensus       118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~g~Iv~isS~  196 (317)
T 3oec_A          118 DLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERG-QGGSVIFVSST  196 (317)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTC-SCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCCEEEEECcH
Confidence            1   112       223789999999976422   2233   3445666644    444555555543 34677787754


Q ss_pred             ccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          134 ANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ...         .+.|....++.++.-...+-+.++..++  +..|+
T Consensus       197 ~~~---------~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  232 (317)
T 3oec_A          197 VGL---------RGAPGQSHYAASKHGVQGLMLSLANEVG--RHNIR  232 (317)
T ss_dssp             GGS---------SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             Hhc---------CCCCCCcchHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence            331         1223222345555555667777777764  33454

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.67  E-value=0.00021  Score=63.82  Aligned_cols=156  Identities=16%  Similarity=0.113  Sum_probs=82.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch-h----hhhhhHHHHhhhhcCCccceEee-CC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-E----ALNGVKMELVDAAFPLLKGVVAT-TD   74 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~----~l~~~~~dl~~~~~~~~~~~~~~-~~   74 (332)
                      |+.+.+++.|+||+|.+|.+++..|+..|.       +|++.|++... +    .++....++..... ...-+... ++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~   73 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGA-------NVAIAAKSAVANPKLPGTIHSAAAAVNAAGG-QGLALKCDIRE   73 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCCSCCTTSCCCHHHHHHHHHHHTS-EEEEEECCTTC
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeccchhhhhhHHHHHHHHHHHHhcCC-eEEEEeCCCCC
Confidence            556678999999999999999999999874       79999987521 0    12212222221110 00000010 11


Q ss_pred             ---h-------hhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcc
Q 020022           75 ---A-------VEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        75 ---~-------~~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~  134 (332)
                         .       .+.+...|++|+.||......   .+   .+..+..|+.-...+    .+.+.+..  .+.||++|...
T Consensus        74 ~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~g~iv~isS~~  151 (274)
T 3e03_A           74 EDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP--NPHILTLAPPP  151 (274)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS--SCEEEECCCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC--CceEEEECChH
Confidence               1       122347899999999754221   23   234456676544444    44444432  35777777544


Q ss_pred             cchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          135 NTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .......       +....++.++.--..+-+.+++.++
T Consensus       152 ~~~~~~~-------~~~~~Y~asKaal~~l~~~la~e~~  183 (274)
T 3e03_A          152 SLNPAWW-------GAHTGYTLAKMGMSLVTLGLAAEFG  183 (274)
T ss_dssp             CCCHHHH-------HHCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             hcCCCCC-------CCCchHHHHHHHHHHHHHHHHHHhh
Confidence            3322100       0001123334444556666777664

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.66  E-value=0.00014  Score=66.70  Aligned_cols=157  Identities=13%  Similarity=0.143  Sum_probs=86.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC-------chhhhhhhHHHHhhhhcCCccceEeeCC--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-------AAEALNGVKMELVDAAFPLLKGVVATTD--   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-------~~~~l~~~~~dl~~~~~~~~~~~~~~~~--   74 (332)
                      ..+++.|+||+|.+|.+++..|+..|.       +|++.|+..       +.++++....++..........+....+  
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-------~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~   80 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-------LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGE   80 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHH
Confidence            347899999999999999999998874       788887631       1233332233332211000000000001  


Q ss_pred             -----hhhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           75 -----AVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        75 -----~~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                           ..+.+...|++|+.||+....   ..+.   +..+..|+..    ++.+.+.+++..  .++||++|....    
T Consensus        81 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~grIV~vsS~~~----  154 (319)
T 1gz6_A           81 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN--YGRIIMTASASG----  154 (319)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEECCHHH----
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CCEEEEECChhh----
Confidence                 112244789999999976432   1232   3445667655    444555555543  367777775322    


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+  +.+....++.++.-...+-+.+++.+.  +..|+
T Consensus       155 ---~~--~~~~~~~Y~aSK~a~~~~~~~la~el~--~~gI~  188 (319)
T 1gz6_A          155 ---IY--GNFGQANYSAAKLGLLGLANTLVIEGR--KNNIH  188 (319)
T ss_dssp             ---HH--CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEE
T ss_pred             ---cc--CCCCCHHHHHHHHHHHHHHHHHHHHhc--ccCEE
Confidence               11  122222455566665667777777764  34565

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.65  E-value=2.6e-05  Score=70.47  Aligned_cols=99  Identities=17%  Similarity=0.160  Sum_probs=57.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch----hhhhhhHHHHhhhhcC-CccceEeeCCh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA----EALNGVKMELVDAAFP-LLKGVVATTDA   75 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~----~~l~~~~~dl~~~~~~-~~~~~~~~~~~   75 (332)
                      |+. ++||+|+||+|++|++++..|+..|.       ++++++++...    ++.+ ....+...... ...++.....+
T Consensus         1 M~~-~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~~~~~~~~~~-~~~~l~~~~v~~v~~D~~d~~~l   71 (308)
T 1qyc_A            1 MGS-RSRILLIGATGYIGRHVAKASLDLGH-------PTFLLVRESTASSNSEKAQ-LLESFKASGANIVHGSIDDHASL   71 (308)
T ss_dssp             -CC-CCCEEEESTTSTTHHHHHHHHHHTTC-------CEEEECCCCCTTTTHHHHH-HHHHHHTTTCEEECCCTTCHHHH
T ss_pred             CCC-CCEEEEEcCCcHHHHHHHHHHHhCCC-------CEEEEECCcccccCHHHHH-HHHHHHhCCCEEEEeccCCHHHH
Confidence            542 46899999999999999999998762       57888876421    1111 01111111000 00011111235


Q ss_pred             hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022           76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA  121 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~  121 (332)
                      .++++++|+||++++...             ....+.+++.+++.+
T Consensus        72 ~~~~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g  104 (308)
T 1qyc_A           72 VEAVKNVDVVISTVGSLQ-------------IESQVNIIKAIKEVG  104 (308)
T ss_dssp             HHHHHTCSEEEECCCGGG-------------SGGGHHHHHHHHHHC
T ss_pred             HHHHcCCCEEEECCcchh-------------hhhHHHHHHHHHhcC
Confidence            678889999999988542             122345666666664

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.64  E-value=2.8e-05  Score=70.74  Aligned_cols=97  Identities=14%  Similarity=0.176  Sum_probs=57.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC-c---hhhhhhhHHHHhhhhcC-CccceEeeCChhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-A---AEALNGVKMELVDAAFP-LLKGVVATTDAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-~---~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~a   78 (332)
                      +++||+|+||+|++|++++..|+..|.       +|++++++. .   .++.+ ...++...... ...++.-...+.++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~~-~l~~~~~~~v~~v~~D~~d~~~l~~a   74 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSH-------PTFIYARPLTPDSTPSSVQ-LREEFRSMGVTIIEGEMEEHEKMVSV   74 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTC-------CEEEEECCCCTTCCHHHHH-HHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCC-------cEEEEECCcccccChHHHH-HHHHhhcCCcEEEEecCCCHHHHHHH
Confidence            356899999999999999999998762       688888874 1   11111 11111111100 00011111235678


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA  121 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~  121 (332)
                      ++++|+||++++...             ....+.+++.+.+.+
T Consensus        75 ~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g  104 (321)
T 3c1o_A           75 LKQVDIVISALPFPM-------------ISSQIHIINAIKAAG  104 (321)
T ss_dssp             HTTCSEEEECCCGGG-------------SGGGHHHHHHHHHHC
T ss_pred             HcCCCEEEECCCccc-------------hhhHHHHHHHHHHhC
Confidence            999999999988542             222345666666654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.64  E-value=0.00027  Score=61.78  Aligned_cols=146  Identities=18%  Similarity=0.227  Sum_probs=71.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH---------HHHhhhhcCCccceEe
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK---------MELVDAAFPLLKGVVA   71 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~---------~dl~~~~~~~~~~~~~   71 (332)
                      |+.+.+++.|+||+|++|.+++..|+. +.       .+.++|+++  +.++...         .|+.+....     ..
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~D~~~~~~~-----~~   65 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DH-------IVYALGRNP--EHLAALAEIEGVEPIESDIVKEVLE-----EG   65 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TS-------EEEEEESCH--HHHHHHHTSTTEEEEECCHHHHHHT-----SS
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CC-------eEEEEeCCH--HHHHHHHhhcCCcceecccchHHHH-----HH
Confidence            666778999999999999999999976 42       688999874  3332111         112111100     00


Q ss_pred             eCChhhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           72 TTDAVEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                      .....+.+...|++|+.||......   .+   ....+..|+..    ++.+.+.+++..   +.+|++|.....     
T Consensus        66 ~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---g~iv~isS~~~~-----  137 (245)
T 3e9n_A           66 GVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS---GCVIYINSGAGN-----  137 (245)
T ss_dssp             SCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEC----------
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC---CeEEEEcCcccc-----
Confidence            0111233457899999999754221   12   22345556544    555555555532   456676643321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                          .+.|....++.++.-...+-+.+++.++
T Consensus       138 ----~~~~~~~~Y~asK~a~~~~~~~la~e~~  165 (245)
T 3e9n_A          138 ----GPHPGNTIYAASKHALRGLADAFRKEEA  165 (245)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----cCCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence                1122222345555555566666777654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.64  E-value=5.4e-05  Score=67.04  Aligned_cols=39  Identities=18%  Similarity=0.094  Sum_probs=31.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ++++|.|+||+|++|++++..|+..|.-.    .+|++.+++.
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~----~~V~~~~r~~   58 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPP----QHLFTTCRNR   58 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCC----SEEEEEESCT
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCC----cEEEEEecCh
Confidence            34689999999999999999999876100    1799999875

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.63  E-value=5.3e-05  Score=66.95  Aligned_cols=157  Identities=15%  Similarity=0.086  Sum_probs=78.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh--
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA--   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a--   78 (332)
                      |+.+.+++.|+||+|.+|.+++..|+..|.       ++++.|++. ++..+    ++.........+++...+..++  
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~-~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~   72 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGA-------QVVVLDIRG-EDVVA----DLGDRARFAAADVTDEAAVASALD   72 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTC-------EEEEEESSC-HHHHH----HTCTTEEEEECCTTCHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCch-HHHHH----hcCCceEEEECCCCCHHHHHHHHH
Confidence            444557899999999999999999999874       789999864 11111    1110000000000000011112  


Q ss_pred             ----cCCCcEEEEeCCCCCCC-------CCC---HHHHHHhhHHHHHHHHHHHHhhc----------CCCeEEEEecCcc
Q 020022           79 ----CTGVNIAVMVGGFPRKE-------GME---RKDVMSKNVSIYKAQASALEQHA----------APNCKVLVVANPA  134 (332)
Q Consensus        79 ----l~~aDiVi~~ag~~~~~-------~~~---r~~~~~~n~~i~~~i~~~i~~~~----------~~~~~viv~tNP~  134 (332)
                          +...|++|+.||.....       ..+   .+..+..|+.-...+.+.+..+-          ...+.||++|.-.
T Consensus        73 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  152 (257)
T 3tl3_A           73 LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVA  152 (257)
T ss_dssp             HHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC
T ss_pred             HHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchh
Confidence                34899999999974210       122   34456677755544444443321          1246777777543


Q ss_pred             cchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          135 NTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ....         .+....++.++.--..+-+.++..+.  +..|+
T Consensus       153 ~~~~---------~~~~~~Y~asKaa~~~~~~~la~e~~--~~gI~  187 (257)
T 3tl3_A          153 AFDG---------QIGQAAYSASKGGVVGMTLPIARDLA--SHRIR  187 (257)
T ss_dssp             --CC---------HHHHHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             hcCC---------CCCCccHHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence            3211         00001123334444456666777664  34565

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.63  E-value=0.0003  Score=61.96  Aligned_cols=145  Identities=12%  Similarity=0.075  Sum_probs=80.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh-------h
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE-------A   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~-------a   78 (332)
                      +++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++.. .++....... ..+ ...+..+       .
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~-~~l~~~~~~~-~~~-d~~~v~~~~~~~~~~   69 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-------TVACHDESF--KQKDEL-EAFAETYPQL-KPM-SEQEPAELIEAVTSA   69 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-------EEEECCGGG--GSHHHH-HHHHHHCTTS-EEC-CCCSHHHHHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHH-HHHHhcCCcE-EEE-CHHHHHHHHHHHHHH
Confidence            4799999999999999999998874       799999874  333322 1232211000 000 1112222       2


Q ss_pred             cCCCcEEEEeCCCC-CCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           79 CTGVNIAVMVGGFP-RKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        79 l~~aDiVi~~ag~~-~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      +...|++|+.||.. ...   ..+.   +..+..|+..    .+.+.+.+.+..  .++||++|.-...         .+
T Consensus        70 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~---------~~  138 (254)
T 1zmt_A           70 YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK--SGHIIFITSATPF---------GP  138 (254)
T ss_dssp             HSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECCSTTT---------SC
T ss_pred             hCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CcEEEEECCcccc---------cC
Confidence            34789999999976 321   1222   3445566654    444555555543  3567777754321         11


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .+....++.++.....+-+.+++.++
T Consensus       139 ~~~~~~Y~~sK~a~~~~~~~la~e~~  164 (254)
T 1zmt_A          139 WKELSTYTSARAGACTLANALSKELG  164 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhh
Confidence            22222344555555566666777663

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.63  E-value=0.00015  Score=66.66  Aligned_cols=36  Identities=19%  Similarity=0.158  Sum_probs=30.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEe-CCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLD-IPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D-~~~   46 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.| +++
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-------~Vv~~~~r~~   81 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-------AVCLHYHRSA   81 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCCCH
Confidence            346899999999999999999998874       789999 763

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.62  E-value=8.9e-05  Score=64.63  Aligned_cols=153  Identities=12%  Similarity=0.091  Sum_probs=80.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEE-EeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chhhhc-
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHM-LDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAVEAC-   79 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L-~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~~al-   79 (332)
                      ++|.|+||+|++|.+++..|+..|.       ++++ +++++  +.++....++.... ....-+... +   +..+++ 
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~-------~v~~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~   71 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGC-------KVLVNYARSA--KAAEEVSKQIEAYG-GQAITFGGDVSKEADVEAMMK   71 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSCH--HHHHHHHHHHHHHT-CEEEEEECCTTSHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcC-CcEEEEeCCCCCHHHHHHHHH
Confidence            5799999999999999999998763       6777 46653  33332222332211 000000110 1   112222 


Q ss_pred             ------CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhh---cCCCeEEEEecCcccchHHHHHHh
Q 020022           80 ------TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        80 ------~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~---~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                            .+.|+||+.||.....   ..+   ....+..|+.....+.+.+.++   . +..+||++|.....       .
T Consensus        72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~-------~  143 (244)
T 1edo_A           72 TAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASVVGL-------I  143 (244)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHH-------H
T ss_pred             HHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCEEEEECChhhc-------C
Confidence                  3789999999976432   122   2345666766544444444332   2 23577777753221       1


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        +.+....++.++.....+.+.+++.+.  +..++
T Consensus       144 --~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  175 (244)
T 1edo_A          144 --GNIGQANYAAAKAGVIGFSKTAAREGA--SRNIN  175 (244)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHH--TTTEE
T ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHhh--hcCCE
Confidence              122222344444444555566666653  34555

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.61  E-value=0.00015  Score=64.95  Aligned_cols=154  Identities=11%  Similarity=0.135  Sum_probs=87.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe----eCChhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA----TTDAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~----~~~~~~al   79 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++..... ....+..    ..+..+.+
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~  101 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-------HVILHGVKP--GSTAAVQQRIIASGG-TAQELAGDLSEAGAGTDLI  101 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESST--TTTHHHHHHHHHTTC-CEEEEECCTTSTTHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHH
Confidence            346899999999999999999999874       799999975  344433344432110 0000111    01111122


Q ss_pred             ------CCCcEEEEeCCCCCCCC---CCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           80 ------TGVNIAVMVGGFPRKEG---MERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        80 ------~~aDiVi~~ag~~~~~~---~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                            ...|++|+.||......   .+.+   ..+..|+.    .++.+.+.+.+..  .+.||++|......      
T Consensus       102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~g~Iv~isS~~~~~------  173 (275)
T 4imr_A          102 ERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK--WGRVVSIGSINQLR------  173 (275)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGTS------
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEECCHHhCC------
Confidence                  36899999999754321   2333   34556654    4455555555543  36787877533211      


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         ..+....++.++.-...+-+.++..++  +..|+
T Consensus       174 ---~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~  205 (275)
T 4imr_A          174 ---PKSVVTAYAATKAAQHNLIQSQARDFA--GDNVL  205 (275)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence               112111245555555667777777764  34565

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.61  E-value=0.00038  Score=62.20  Aligned_cols=154  Identities=8%  Similarity=0.023  Sum_probs=84.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE---   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~---   77 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|++.  +.+.....++.........-+... ++   ..+   
T Consensus        27 ~k~~lVTGas~GIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   97 (277)
T 4fc7_A           27 DKVAFITGGGSGIGFRIAEIFMRHGC-------HTVIASRSL--PRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVD   97 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESCH--HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            46899999999999999999998874       799999874  344333333432111100001110 11   112   


Q ss_pred             ----hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcccchHHHHHH
Q 020022           78 ----ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                          .+...|++|+.||.....   ..+   ....+..|+.....+.+.+    .+..  .+.||++|.....       
T Consensus        98 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~-------  168 (277)
T 4fc7_A           98 QALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH--GGVIVNITATLGN-------  168 (277)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH--CEEEEEECCSHHH-------
T ss_pred             HHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CCEEEEECchhhC-------
Confidence                223789999999965422   123   2345566765555444443    4433  3677777753321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .  +.+..-.++.++.-...+-+.++..++  +..|+
T Consensus       169 ~--~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~  201 (277)
T 4fc7_A          169 R--GQALQVHAGSAKAAVDAMTRHLAVEWG--PQNIR  201 (277)
T ss_dssp             H--TCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             C--CCCCcHHHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence            1  122222344455555566677777764  34555

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.61  E-value=7.9e-05  Score=68.48  Aligned_cols=160  Identities=11%  Similarity=0.059  Sum_probs=81.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC---chhhhhhhHHHHhhhhcCCccceEe----eC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP---AAEALNGVKMELVDAAFPLLKGVVA----TT   73 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~---~~~~l~~~~~dl~~~~~~~~~~~~~----~~   73 (332)
                      |++..++|.||||+|++|.+++..|+..|.       +|++.+++.   +.+.++.....+.... ....-+..    ..
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~-------~V~~~~r~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~Dvtd~~   72 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGH-------RVYASMRDIVGRNASNVEAIAGFARDND-VDLRTLELDVQSQV   72 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESCTTTTTHHHHHHHHHHHHHHT-CCEEEEECCTTCHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEecCcccccCHHHHHHHHHHHHhcC-CcEEEEEeecCCHH
Confidence            766677899999999999999999999874       677766542   1122221111111111 00001111    11


Q ss_pred             ChhhhcC-------CCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcccc
Q 020022           74 DAVEACT-------GVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        74 ~~~~al~-------~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      +..++++       +.|++|+.||+....   ..+.   ...+..|+.....+    .+.+++..  .+.||++|.-...
T Consensus        73 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~--~g~iV~isS~~~~  150 (324)
T 3u9l_A           73 SVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK--HGLLIWISSSSSA  150 (324)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCEEEEEecchhc
Confidence            1223333       899999999975321   1232   34456676554444    44446553  3567777753321


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                              ....|....++.++.....+-+.++..+.  +..|+
T Consensus       151 --------~~~~~~~~~Y~asKaa~~~~~~~la~el~--~~gI~  184 (324)
T 3u9l_A          151 --------GGTPPYLAPYFAAKAAMDAIAVQYARELS--RWGIE  184 (324)
T ss_dssp             --------SCCCSSCHHHHHHHHHHHHHHHHHHHHHH--TTTEE
T ss_pred             --------cCCCCcchhHHHHHHHHHHHHHHHHHHhh--hhCcE
Confidence                    00111111344455555566666666653  34555

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.61  E-value=9.3e-05  Score=65.88  Aligned_cols=157  Identities=14%  Similarity=0.122  Sum_probs=83.0

Q ss_pred             CCcEEEEEcC--CCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc--
Q 020022            4 EPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC--   79 (332)
Q Consensus         4 ~~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al--   79 (332)
                      +.+++.|+||  +|.+|.+++..|+..|.       +|++.|+++. ..++....++.........+++...+..+++  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-------~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   77 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-------QLVLTGFDRL-RLIQRITDRLPAKAPLLELDVQNEEHLASLAGR   77 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-------EEEEEECSCH-HHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-------EEEEEecChH-HHHHHHHHhcCCCceEEEccCCCHHHHHHHHHH
Confidence            3468999998  89999999999998874       7899998752 1112111111000000000000000111222  


Q ss_pred             -----C---CCcEEEEeCCCCCC------C--CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           80 -----T---GVNIAVMVGGFPRK------E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        80 -----~---~aDiVi~~ag~~~~------~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                           .   ..|++|+.||....      +  ..+.   ...+..|+.....+.+.+..+-.+.+.||++|....     
T Consensus        78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-----  152 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-----  152 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-----
T ss_pred             HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-----
Confidence                 2   78999999997541      1  1233   345677887777777777655322356777753211     


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                           .+.+....++.++.-...+-+.++..+.  +..|+
T Consensus       153 -----~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~  185 (269)
T 2h7i_A          153 -----RAMPAYNWMTVAKSALESVNRFVAREAG--KYGVR  185 (269)
T ss_dssp             -----SCCTTTHHHHHHHHHHHHHHHHHHHHHH--TTTCE
T ss_pred             -----cccCchHHHHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence                 0112111233444444556666666653  34454

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.60  E-value=0.00028  Score=61.80  Aligned_cols=147  Identities=12%  Similarity=0.103  Sum_probs=83.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-e--CCCchhhhhhhHHHHhhhhcCCccceEeeCChh------
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-D--IPPAAEALNGVKMELVDAAFPLLKGVVATTDAV------   76 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D--~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~------   76 (332)
                      +++.|+||+|.+|.+++..|+..|.       +|++. +  +++  +.++....++ ..     .++....+..      
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~~~~r~~--~~~~~~~~~~-~~-----~~~~~~~~v~~~~~~~   66 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGY-------TVVCHDASFADA--AERQRFESEN-PG-----TIALAEQKPERLVDAT   66 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-------EEEECCGGGGSH--HHHHHHHHHS-TT-----EEECCCCCGGGHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCcCCH--HHHHHHHHHh-CC-----CcccCHHHHHHHHHHH
Confidence            5799999999999999999998874       78888 5  763  3333222222 10     0110111122      


Q ss_pred             -hhcCCCcEEEEeCCCCCC---C---CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           77 -EACTGVNIAVMVGGFPRK---E---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        77 -~al~~aDiVi~~ag~~~~---~---~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                       +.+...|++|+.||....   .   ..+.   +..+..|+...    +.+.+.+.+..  .+.||++|.-...      
T Consensus        67 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--~g~iv~isS~~~~------  138 (244)
T 1zmo_A           67 LQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG--GASVIFITSSVGK------  138 (244)
T ss_dssp             GGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEEECCGGGT------
T ss_pred             HHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CcEEEEECChhhC------
Confidence             223478999999997543   1   2232   33456666444    44445554443  3677787754321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.|....++.++.....+-+.++..+.  +..|+
T Consensus       139 ---~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~  171 (244)
T 1zmo_A          139 ---KPLAYNPLYGPARAATVALVESAAKTLS--RDGIL  171 (244)
T ss_dssp             ---SCCTTCTTHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence               1223222445555555566667777664  34565

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.60  E-value=0.00017  Score=64.68  Aligned_cols=155  Identities=12%  Similarity=0.099  Sum_probs=91.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-------Chhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-------DAVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-------~~~~a   78 (332)
                      +.+.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++..........++...       ...+.
T Consensus        30 KvalVTGas~GIG~aiA~~la~~Ga-------~V~i~~r~~--~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           30 KIAVITGATSGIGLAAAKRFVAEGA-------RVFITGRRK--DVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999875       799999984  5565444444221111101110000       12233


Q ss_pred             cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc
Q 020022           79 CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN  152 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~  152 (332)
                      +-..|++|..||.....   ..+   .+..+..|+.-.-.+.+....+-.+.+.||+++.-...         .+.|..-
T Consensus       101 ~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~---------~~~~~~~  171 (273)
T 4fgs_A          101 AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS---------TGTPAFS  171 (273)
T ss_dssp             HSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG---------SCCTTCH
T ss_pred             cCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc---------cCCCCch
Confidence            45689999999975422   123   34556777766655555555443344567777643321         1223222


Q ss_pred             EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          153 ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       153 i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .++.++---..|-+.+|..++  +..|+
T Consensus       172 ~Y~asKaav~~ltr~lA~Ela--~~gIr  197 (273)
T 4fgs_A          172 VYAASKAALRSFARNWILDLK--DRGIR  197 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT--TSCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence            345555555677788888776  56676

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.60  E-value=0.00029  Score=62.23  Aligned_cols=159  Identities=12%  Similarity=0.110  Sum_probs=82.2

Q ss_pred             CCC--CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---C
Q 020022            1 MAK--EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---D   74 (332)
Q Consensus         1 m~~--~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~   74 (332)
                      |++  +++++.|+||+|.+|.+++..|+..|.       ++.+.+.+. .+.++.....+.... ....-+... +   +
T Consensus         1 M~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~   71 (264)
T 3i4f_A            1 MSLGRFVRHALITAGTKGLGKQVTEKLLAKGY-------SVTVTYHSD-TTAMETMKETYKDVE-ERLQFVQADVTKKED   71 (264)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHTGGGG-GGEEEEECCTTSHHH
T ss_pred             CCcccccCEEEEeCCCchhHHHHHHHHHHCCC-------EEEEEcCCC-hHHHHHHHHHHHhcC-CceEEEEecCCCHHH
Confidence            554  356899999999999999999998874       688887664 222222111111110 000000110 1   1


Q ss_pred             hhhhc-------CCCcEEEEeCCC--CCC-C--CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCc-c
Q 020022           75 AVEAC-------TGVNIAVMVGGF--PRK-E--GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANP-A  134 (332)
Q Consensus        75 ~~~al-------~~aDiVi~~ag~--~~~-~--~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP-~  134 (332)
                      ..+++       ...|++|+.||.  ... +  ..+.   ...+..|+...    +.+.+.+++..  .+.||++|.. .
T Consensus        72 v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~g~iv~iss~~~  149 (264)
T 3i4f_A           72 LHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN--FGRIINYGFQGA  149 (264)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCTTG
T ss_pred             HHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC--CCeEEEEeechh
Confidence            12222       378999999994  211 1  1232   34456666544    44444446553  3567777643 2


Q ss_pred             cchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          135 NTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .       . ..+++....++.++.....+-+.++..+.  +..|+
T Consensus       150 ~-------~-~~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  185 (264)
T 3i4f_A          150 D-------S-APGWIYRSAFAAAKVGLVSLTKTVAYEEA--EYGIT  185 (264)
T ss_dssp             G-------G-CCCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             c-------c-cCCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence            1       0 12333333455555555566667777654  34555

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.60  E-value=0.00033  Score=63.16  Aligned_cols=36  Identities=19%  Similarity=0.158  Sum_probs=31.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEe-CCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLD-IPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D-~~~   46 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       .|++.| +++
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-------~V~~~~~r~~   44 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-------AVCLHYHRSA   44 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSCH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEcCCCH
Confidence            456899999999999999999998874       789999 763

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.60  E-value=8.7e-05  Score=65.86  Aligned_cols=153  Identities=14%  Similarity=0.122  Sum_probs=83.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh-----hHHHHhhhhcCCccceEeeCChhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-----VKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~-----~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      +.++|.|+||+|++|.+++..|+..|.       +|++.|++..  ....     ...|+.+....  ..  ......+.
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~Dv~d~~~v--~~--~~~~~~~~   93 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-------RVVATSRSIK--PSADPDIHTVAGDISKPETA--DR--IVREGIER   93 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESSCC--CCSSTTEEEEESCTTSHHHH--HH--HHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCChh--hcccCceEEEEccCCCHHHH--HH--HHHHHHHH
Confidence            456899999999999999999999874       7999998752  2211     11222221100  00  00011223


Q ss_pred             cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHH----HHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCC
Q 020022           79 CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~----i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      +.+.|++|+.||......   .+   ....+..|+.....    ..+.+.+..  .+.+|++|.....      . ....
T Consensus        94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~g~iv~isS~~~~------~-~~~~  164 (260)
T 3un1_A           94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG--SGHIVSITTSLVD------Q-PMVG  164 (260)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEEECCTTTT------S-CBTT
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CcEEEEEechhhc------c-CCCC
Confidence            348999999999864221   23   23445667655444    444445543  3567777643210      0 0001


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ++...++.++.....+-+.++..+.  +..|+
T Consensus       165 ~~~~~Y~~sKaa~~~l~~~la~e~~--~~gI~  194 (260)
T 3un1_A          165 MPSALASLTKGGLNAVTRSLAMEFS--RSGVR  194 (260)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--TTTEE
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhC--cCCeE
Confidence            1112344445555667777888774  45565

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.60  E-value=0.0003  Score=62.34  Aligned_cols=152  Identities=16%  Similarity=0.077  Sum_probs=83.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE---   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~---   77 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++...... ..-+... ++   ..+   
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~   80 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQGA-------DLVLAARTV--ERLEDVAKQVTDTGRR-ALSVGTDITDDAQVAHLVD   80 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCC-EEEEECCTTCHHHHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-EEEEEcCCCCHHHHHHHHH
Confidence            46899999999999999999999874       799999874  4444444444322100 0001110 11   112   


Q ss_pred             ----hcCCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHHHH----HHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           78 ----ACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYK----AQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i~~----~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                          .+...|++|+.||.....    ..+.   ...+..|+....    .+.+.+.+.  + +.||++|.-...      
T Consensus        81 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~-g~iv~isS~~~~------  151 (264)
T 3ucx_A           81 ETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--K-GAVVNVNSMVVR------  151 (264)
T ss_dssp             HHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--T-CEEEEECCGGGG------
T ss_pred             HHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--C-CEEEEECcchhc------
Confidence                223789999999874221    2232   334556665444    444444443  2 467777654321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+..-.++.++.--..+-+.++..++  +..|+
T Consensus       152 ---~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  184 (264)
T 3ucx_A          152 ---HSQAKYGAYKMAKSALLAMSQTLATELG--EKGIR  184 (264)
T ss_dssp             ---CCCTTCHHHHHHHHHHHHHHHHHHHHHH--TTTCE
T ss_pred             ---cCCCccHHHHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence               1222222344555544566666777654  33454

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=97.59  E-value=0.00036  Score=67.89  Aligned_cols=99  Identities=8%  Similarity=0.032  Sum_probs=64.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG---   81 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~---   81 (332)
                      ..||+||| .|.||+.++..|+..|.       +|.++|+++  ++++    .+.....+ ...+..+.+..+++++   
T Consensus        10 ~~~IgvIG-lG~MG~~lA~~La~~G~-------~V~v~dr~~--~~~~----~l~~~~~~-~~gi~~~~s~~e~v~~l~~   74 (497)
T 2p4q_A           10 SADFGLIG-LAVMGQNLILNAADHGF-------TVCAYNRTQ--SKVD----HFLANEAK-GKSIIGATSIEDFISKLKR   74 (497)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSSS--HHHH----HHHHTTTT-TSSEECCSSHHHHHHTSCS
T ss_pred             CCCEEEEe-eHHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHH----HHHccccc-CCCeEEeCCHHHHHhcCCC
Confidence            46899999 79999999999998773       699999985  3332    22220000 1235555667776666   


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      +|+||++...+               ..++++++.+..+..|+.+||..+|-
T Consensus        75 aDvVil~Vp~~---------------~~v~~vl~~l~~~l~~g~iIId~s~~  111 (497)
T 2p4q_A           75 PRKVMLLVKAG---------------APVDALINQIVPLLEKGDIIIDGGNS  111 (497)
T ss_dssp             SCEEEECCCSS---------------HHHHHHHHHHGGGCCTTCEEEECSCC
T ss_pred             CCEEEEEcCCh---------------HHHHHHHHHHHHhCCCCCEEEECCCC
Confidence            99999985321               12445556666666566667777764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.58  E-value=0.00012  Score=65.27  Aligned_cols=151  Identities=19%  Similarity=0.197  Sum_probs=85.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhh---HHHHhhhhcCCccceEeeCChhhhcC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV---KMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~---~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       +|++.|++.  +.+...   ..|+.+....  ..  ......+.+.
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~Dv~~~~~~--~~--~~~~~~~~~g   93 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-------RVAVADRAV--AGIAADLHLPGDLREAAYA--DG--LPGAVAAGLG   93 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-------EEEECSSCC--TTSCCSEECCCCTTSHHHH--HH--HHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHhhhccCcCCCCHHHH--HH--HHHHHHHhcC
Confidence            346899999999999999999998874       799999874  222111   1222221100  00  0011223345


Q ss_pred             CCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022           81 GVNIAVMVGGFPRKE---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA  150 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~  150 (332)
                      ..|++|+.||.....   ..+.   ...+..|+...    +.+.+.+++..  .+.||++|.....         .+.+.
T Consensus        94 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~g~iv~isS~~~~---------~~~~~  162 (266)
T 3uxy_A           94 RLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG--GGAIVNVASCWGL---------RPGPG  162 (266)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCSBTT---------BCCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEECCHHhC---------CCCCC
Confidence            799999999986422   1232   34455666544    44444445543  3677777754331         12232


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ...++.++.-...+-+.++..++  +..|+
T Consensus       163 ~~~Y~asKaa~~~l~~~la~e~~--~~gI~  190 (266)
T 3uxy_A          163 HALYCLTKAALASLTQCMGMDHA--PQGIR  190 (266)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence            22455555555667777777764  33555

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.58  E-value=0.00058  Score=60.34  Aligned_cols=155  Identities=15%  Similarity=0.155  Sum_probs=86.6

Q ss_pred             CCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh
Q 020022            4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE   77 (332)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~   77 (332)
                      +.++|.|+||+  |.+|.+++..|+..|.       +|.+.|+++.   ......++.... ....-+... ++   ..+
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~-------~V~~~~r~~~---~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~   81 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREGA-------ELAFTYVGDR---FKDRITEFAAEF-GSELVFPCDVADDAQIDA   81 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-------EEEEEESSGG---GHHHHHHHHHHT-TCCCEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcCC-------CEEEEecchh---hHHHHHHHHHHc-CCcEEEECCCCCHHHHHH
Confidence            35799999988  9999999999999874       7899998731   111222221111 100011110 11   112


Q ss_pred             h-------cCCCcEEEEeCCCCCC-----C--C-CCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           78 A-------CTGVNIAVMVGGFPRK-----E--G-MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        78 a-------l~~aDiVi~~ag~~~~-----~--~-~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                      .       +...|++|+.||....     +  . .+.   ...+..|+.....+.+.+..+..+.+.||++|.....   
T Consensus        82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~---  158 (271)
T 3ek2_A           82 LFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE---  158 (271)
T ss_dssp             HHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGT---
T ss_pred             HHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccc---
Confidence            2       2367999999997542     1  1 232   3456777777777777766553334567777643321   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                            .+.|....++.++.-...+-+.+++.+.  +..|+
T Consensus       159 ------~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  191 (271)
T 3ek2_A          159 ------RAIPNYNTMGLAKAALEASVRYLAVSLG--AKGVR  191 (271)
T ss_dssp             ------SBCTTTTHHHHHHHHHHHHHHHHHHHHH--TTTCE
T ss_pred             ------cCCCCccchhHHHHHHHHHHHHHHHHHH--hcCcE
Confidence                  1223222345555555566666777664  23454

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.56  E-value=0.001  Score=58.91  Aligned_cols=157  Identities=15%  Similarity=0.137  Sum_probs=93.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeC-----
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATT-----   73 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~-----   73 (332)
                      +-+.+.+.|+||++.+|.+++..|+..|.       .|+++|+++  +.++..+.++.......   ..+++...     
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-------~Vv~~~~~~--~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~   74 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-------IVVAVELLE--DRLNQIVQELRGMGKEVLGVKADVSKKKDVEEF   74 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            33557889999999999999999999874       799999984  55655555554322110   00110000     


Q ss_pred             --ChhhhcCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           74 --DAVEACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        74 --~~~~al~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                        ...+.+-..|++|..||+...  +  ..+.   +..+..|+    -..+..++.+.+..  .+.||+++.-...    
T Consensus        75 ~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--~G~IVnisS~~g~----  148 (254)
T 4fn4_A           75 VRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG--KGVIVNTASIAGI----  148 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT----
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CcEEEEEechhhc----
Confidence              112335578999999996432  2  2333   33455555    55677777777764  3678888753321    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                           .+.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       149 -----~~~~~~~~Y~asKaal~~ltr~lA~ela--~~gIr  181 (254)
T 4fn4_A          149 -----RGGFAGAPYTVAKHGLIGLTRSIAAHYG--DQGIR  181 (254)
T ss_dssp             -----CSSSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -----CCCCCChHHHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence                 1222212344444444567777777765  45666

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.55  E-value=0.00018  Score=65.33  Aligned_cols=65  Identities=17%  Similarity=0.244  Sum_probs=44.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ..||++|| .|.||+.++..|+..|.       +++.||+++  ++.+    .+...      ......+..+++++||+
T Consensus         5 s~kIgfIG-LG~MG~~mA~~L~~~G~-------~V~v~dr~~--~~~~----~l~~~------G~~~~~s~~e~~~~~dv   64 (297)
T 4gbj_A            5 SEKIAFLG-LGNLGTPIAEILLEAGY-------ELVVWNRTA--SKAE----PLTKL------GATVVENAIDAITPGGI   64 (297)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTC-------EEEEC---------C----TTTTT------TCEECSSGGGGCCTTCE
T ss_pred             CCcEEEEe-cHHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHH----HHHHc------CCeEeCCHHHHHhcCCc
Confidence            45899999 89999999999998874       799999985  3332    12221      22344567899999999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||++-
T Consensus        65 vi~~l   69 (297)
T 4gbj_A           65 VFSVL   69 (297)
T ss_dssp             EEECC
T ss_pred             eeeec
Confidence            99874

>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}

Probab=97.55  E-value=0.00015  Score=66.10  Aligned_cols=122  Identities=11%  Similarity=0.077  Sum_probs=67.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      +|||+|+| +|.+|+.++..|. .+.       +|.++++++  +.++....+=.....+........+...++..++|+
T Consensus         2 ~mkI~IiG-aGa~G~~~a~~L~-~g~-------~V~~~~r~~--~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~   70 (307)
T 3ego_A            2 SLKIGIIG-GGSVGLLCAYYLS-LYH-------DVTVVTRRQ--EQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDL   70 (307)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHH-TTS-------EEEEECSCH--HHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHh-cCC-------ceEEEECCH--HHHHHHHhCCceEecCCCeecccccccccccCCCCE
Confidence            36999999 6999999999998 652       799999873  222211110000000000000000111245688999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechH
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRL  159 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~l  159 (332)
                      ||++.-..                .+.+.++.+... +++. ||.+.|-++.. ..+.++   +|.+++ ++.+..
T Consensus        71 vilavK~~----------------~~~~~l~~l~~~-~~~~-ivs~~nGi~~~-e~l~~~---~~~~~vl~g~~~~  124 (307)
T 3ego_A           71 LVVTVKQH----------------QLQSVFSSLERI-GKTN-ILFLQNGMGHI-HDLKDW---HVGHSIYVGIVEH  124 (307)
T ss_dssp             EEECCCGG----------------GHHHHHHHTTSS-CCCE-EEECCSSSHHH-HHHHTC---CCSCEEEEEEECC
T ss_pred             EEEEeCHH----------------HHHHHHHHhhcC-CCCe-EEEecCCccHH-HHHHHh---CCCCcEEEEEEee
Confidence            99984211                133455666655 3566 77788977643 233333   466665 444443

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.54  E-value=0.00013  Score=65.04  Aligned_cols=150  Identities=13%  Similarity=0.045  Sum_probs=78.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh-------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE-------   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~-------   77 (332)
                      .++|.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.... ....++....+..+       
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~   78 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNSGA-------RVVICDKDE--SGGRALEQELPGAV-FILCDVTQEDDVKTLVSETIR   78 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHCTTEE-EEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCCe-EEEcCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999998874       799999874  33332222221100 00000000001112       


Q ss_pred             hcCCCcEEEEeCCCCCCCC----CC---HHHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCcccchHHHHHHhCCCCC
Q 020022           78 ACTGVNIAVMVGGFPRKEG----ME---RKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPSIP  149 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~----~~---r~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~~~~~~~~~~  149 (332)
                      .+...|++|+.||.....+    .+   .+..+..|+.....+.+.+..+. .....||++|.-..       ..  +.+
T Consensus        79 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~-------~~--~~~  149 (270)
T 1yde_A           79 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG-------AI--GQA  149 (270)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH-------HH--CCT
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccc-------cC--CCC
Confidence            2337899999999753211    22   23455667655555544443221 01246777774321       11  122


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcC
Q 020022          150 AKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      ....++.++.....+-+.++..+.
T Consensus       150 ~~~~Y~asKaa~~~~~~~la~e~~  173 (270)
T 1yde_A          150 QAVPYVATKGAVTAMTKALALDES  173 (270)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhh
Confidence            222344455545566666666653

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.54  E-value=0.00021  Score=63.71  Aligned_cols=145  Identities=12%  Similarity=0.115  Sum_probs=82.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh----hHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG----VKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~----~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      .++|.|+||+|.+|.+++..|+..|.       +|++.|+++.  .+.+    ...|+.+....  ..  ......+.+.
T Consensus        14 ~k~vlVTGas~GIG~aia~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~Dv~~~~~v--~~--~~~~~~~~~g   80 (269)
T 3vtz_A           14 DKVAIVTGGSSGIGLAVVDALVRYGA-------KVVSVSLDEK--SDVNVSDHFKIDVTNEEEV--KE--AVEKTTKKYG   80 (269)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESCC----CTTSSEEEECCTTCHHHH--HH--HHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCch--hccCceeEEEecCCCHHHH--HH--HHHHHHHHcC
Confidence            47899999999999999999999874       7899998752  2211    11222221100  00  0001223345


Q ss_pred             CCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022           81 GVNIAVMVGGFPRKEG---MER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA  150 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~  150 (332)
                      ..|++|+.||......   .+.   ...+..|+...    +.+.+.+.+..  .+.||++|.....         .+.+.
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~---------~~~~~  149 (269)
T 3vtz_A           81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG--HGSIINIASVQSY---------AATKN  149 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT---------SBCTT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CCEEEEECchhhc---------cCCCC
Confidence            7899999999754221   222   23455666444    44555555543  3677777754321         11222


Q ss_pred             CcEEEechHHHHHHHHHHHHHcC
Q 020022          151 KNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      .-.++.++.-...+-+.++..++
T Consensus       150 ~~~Y~asKaa~~~l~~~la~e~~  172 (269)
T 3vtz_A          150 AAAYVTSKHALLGLTRSVAIDYA  172 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhc
Confidence            22455555555677777888775

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.54  E-value=0.00033  Score=63.67  Aligned_cols=64  Identities=22%  Similarity=0.437  Sum_probs=48.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ++||++|| .|.||+.++..|+..|.       +++.||+++  ++.+    .+...      ..+...+..+++++||+
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~-------~v~v~dr~~--~~~~----~l~~~------Ga~~a~s~~e~~~~~dv   62 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGY-------LLNVFDLVQ--SAVD----GLVAA------GASAARSARDAVQGADV   62 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTC-------EEEEECSSH--HHHH----HHHHT------TCEECSSHHHHHTTCSE
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCC-------eEEEEcCCH--HHHH----HHHHc------CCEEcCCHHHHHhcCCc
Confidence            56999999 89999999999998774       799999984  3332    23322      12344568889999999


Q ss_pred             EEEe
Q 020022           85 AVMV   88 (332)
Q Consensus        85 Vi~~   88 (332)
                      ||..
T Consensus        63 v~~~   66 (300)
T 3obb_A           63 VISM   66 (300)
T ss_dssp             EEEC
T ss_pred             eeec
Confidence            9987

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=97.53  E-value=0.00019  Score=63.56  Aligned_cols=65  Identities=14%  Similarity=0.151  Sum_probs=45.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.+|+.++..|+..+. .     ++.++|+++  ++++.    +... .    .+..+.+..+++ ++|+|
T Consensus         1 m~i~iiG-~G~mG~~~a~~l~~~g~-~-----~v~~~~r~~--~~~~~----~~~~-~----g~~~~~~~~~~~-~~D~v   61 (263)
T 1yqg_A            1 MNVYFLG-GGNMAAAVAGGLVKQGG-Y-----RIYIANRGA--EKRER----LEKE-L----GVETSATLPELH-SDDVL   61 (263)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCS-C-----EEEEECSSH--HHHHH----HHHH-T----CCEEESSCCCCC-TTSEE
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCC-C-----eEEEECCCH--HHHHH----HHHh-c----CCEEeCCHHHHh-cCCEE
Confidence            4899999 69999999999987662 1     799999874  33332    2211 0    123445566778 99999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        62 i~~v   65 (263)
T 1yqg_A           62 ILAV   65 (263)
T ss_dssp             EECS
T ss_pred             EEEe
Confidence            9985

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.52  E-value=0.00023  Score=62.02  Aligned_cols=147  Identities=15%  Similarity=0.185  Sum_probs=81.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCCh-------hhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA-------VEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~-------~~a   78 (332)
                      +++.|+||+|.+|.+++..|+..|.       +|++.|+++.  .+.   .++. .. .....+.. .+.       .+.
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~-------~V~~~~r~~~--~~~---~~~~-~~-~~~~D~~~-~~~~~~~~~~~~~   67 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGY-------RVAIASRNPE--EAA---QSLG-AV-PLPTDLEK-DDPKGLVKRALEA   67 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCH--HHH---HHHT-CE-EEECCTTT-SCHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCHH--HHH---HhhC-cE-EEecCCch-HHHHHHHHHHHHH
Confidence            5899999999999999999998773       7999998852  221   1111 00 00000000 111       123


Q ss_pred             cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCC
Q 020022           79 CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      +.+.|++|+.||.....   ..+.   +..+..|+..    .+.+.+.+.+..  ..+||++|.....         .+.
T Consensus        68 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~---------~~~  136 (239)
T 2ekp_A           68 LGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG--WGRVLFIGSVTTF---------TAG  136 (239)
T ss_dssp             HTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT---------SCC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CcEEEEECchhhc---------cCC
Confidence            45799999999975421   1232   3345555544    445555555543  3577777754321         111


Q ss_pred             --CCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          149 --PAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       149 --~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        +....++.++.....+-+.+++.+.  +..|+
T Consensus       137 ~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~  168 (239)
T 2ekp_A          137 GPVPIPAYTTAKTALLGLTRALAKEWA--RLGIR  168 (239)
T ss_dssp             TTSCCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence              2222345555555566667777664  33454

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=97.52  E-value=6e-05  Score=68.26  Aligned_cols=99  Identities=9%  Similarity=0.122  Sum_probs=61.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc-CCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-TGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al-~~aDi   84 (332)
                      |||+|+| +|.+|+.++..|...|.       +|.++++++  +.++     +.......  ......+..+++ .++|+
T Consensus         3 mkI~iiG-aGa~G~~~a~~L~~~g~-------~V~~~~r~~--~~~~-----~~~~~g~~--~~~~~~~~~~~~~~~~D~   65 (294)
T 3g17_A            3 LSVAIIG-PGAVGTTIAYELQQSLP-------HTTLIGRHA--KTIT-----YYTVPHAP--AQDIVVKGYEDVTNTFDV   65 (294)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHHCT-------TCEEEESSC--EEEE-----EESSTTSC--CEEEEEEEGGGCCSCEEE
T ss_pred             cEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEEecc--CcEE-----EEecCCee--ccceecCchHhcCCCCCE
Confidence            6899999 69999999999998763       588999874  2222     11110011  112223345555 89999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN  137 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~  137 (332)
                      ||++.-..                .+++.++.+..+-.++..|+.+.|-++..
T Consensus        66 vilavk~~----------------~~~~~l~~l~~~l~~~~~iv~~~nGi~~~  102 (294)
T 3g17_A           66 IIIAVKTH----------------QLDAVIPHLTYLAHEDTLIILAQNGYGQL  102 (294)
T ss_dssp             EEECSCGG----------------GHHHHGGGHHHHEEEEEEEEECCSSCCCG
T ss_pred             EEEeCCcc----------------CHHHHHHHHHHhhCCCCEEEEeccCcccH
Confidence            99984211                12344445555544566777888987653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.51  E-value=5.5e-05  Score=70.69  Aligned_cols=71  Identities=18%  Similarity=0.215  Sum_probs=44.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee----CChh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT----TDAV   76 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~----~~~~   76 (332)
                      |+.+.|||+|+|| |+||+.++..|....        ++.+.|++.  ++++.    +.+.    ...+...    ..+.
T Consensus        12 ~~g~~mkilvlGa-G~vG~~~~~~L~~~~--------~v~~~~~~~--~~~~~----~~~~----~~~~~~d~~d~~~l~   72 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRAIAWDLKDEF--------DVYIGDVNN--ENLEK----VKEF----ATPLKVDASNFDKLV   72 (365)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHTTTS--------EEEEEESCH--HHHHH----HTTT----SEEEECCTTCHHHHH
T ss_pred             ccCCccEEEEECC-CHHHHHHHHHHhcCC--------CeEEEEcCH--HHHHH----Hhcc----CCcEEEecCCHHHHH
Confidence            5667799999995 999999998886531        789999874  33321    1111    1112211    2345


Q ss_pred             hhcCCCcEEEEeCC
Q 020022           77 EACTGVNIAVMVGG   90 (332)
Q Consensus        77 ~al~~aDiVi~~ag   90 (332)
                      +.++++|+||.+.+
T Consensus        73 ~~~~~~DvVi~~~p   86 (365)
T 3abi_A           73 EVMKEFELVIGALP   86 (365)
T ss_dssp             HHHTTCSEEEECCC
T ss_pred             HHHhCCCEEEEecC
Confidence            67899999999865

>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*

Probab=97.50  E-value=0.00018  Score=68.02  Aligned_cols=96  Identities=17%  Similarity=0.094  Sum_probs=59.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEe---CCCchhhhhhhHHHHhhhh------cC-C-----ccc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLD---IPPAAEALNGVKMELVDAA------FP-L-----LKG   68 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D---~~~~~~~l~~~~~dl~~~~------~~-~-----~~~   68 (332)
                      +|||+|+| +|.+|..++..|+. .|.       +|.++|   +++  +.++..   +....      .. .     ..+
T Consensus         2 ~mkI~ViG-aG~~G~~~a~~La~~~G~-------~V~~~~~~~r~~--~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~   68 (404)
T 3c7a_A            2 TVKVCVCG-GGNGAHTLSGLAASRDGV-------EVRVLTLFADEA--ERWTKA---LGADELTVIVNEKDGTQTEVKSR   68 (404)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTSTTE-------EEEEECCSTTHH--HHHHHH---HTTSCEEEEEECSSSCEEEEEEC
T ss_pred             CceEEEEC-CCHHHHHHHHHHHhCCCC-------EEEEEeCCCCcH--HHHHHH---HhhccceeeeecCCCccceeecc
Confidence            46999999 69999999999976 353       799999   542  222211   11110      00 0     012


Q ss_pred             e-EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEE
Q 020022           69 V-VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLV  129 (332)
Q Consensus        69 ~-~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv  129 (332)
                      + ..+++..+++++||+||++....                ..+++++.+..+..++.+|+.
T Consensus        69 ~~~~~~~~~~a~~~aD~Vilav~~~----------------~~~~v~~~l~~~l~~~~ivv~  114 (404)
T 3c7a_A           69 PKVITKDPEIAISGADVVILTVPAF----------------AHEGYFQAMAPYVQDSALIVG  114 (404)
T ss_dssp             CSEEESCHHHHHTTCSEEEECSCGG----------------GHHHHHHHHTTTCCTTCEEEE
T ss_pred             ceEEeCCHHHHhCCCCEEEEeCchH----------------HHHHHHHHHHhhCCCCcEEEE
Confidence            2 25567778899999999985322                124566677766656654443

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.50  E-value=0.00043  Score=61.00  Aligned_cols=148  Identities=13%  Similarity=0.104  Sum_probs=79.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------hh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------EA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~-------~a   78 (332)
                      +++.|+||+|.+|.+++..|+..|. +    ..|.+.++++  +.++....++.........+++...+..       +.
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~-~----~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDK-D----TVVYGVARSE--APLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG   75 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCS-S----CEEEEEESCH--HHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCC-C----eEEEEecCCH--HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            5799999999999999999988642 1    1688888874  3343322222111000000100000111       22


Q ss_pred             cCCCcEEEEeCCCCCC--C--CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           79 CTGVNIAVMVGGFPRK--E--GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~--~--~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      +...|++|+.||....  +  ..+.+   ..+..|+..    ++.+.+.+++..   +.||++|.....         .+
T Consensus        76 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~---g~iv~isS~~~~---------~~  143 (254)
T 3kzv_A           76 HGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN---GNVVFVSSDACN---------MY  143 (254)
T ss_dssp             HSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEECCSCCC---------CS
T ss_pred             cCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CeEEEEcCchhc---------cC
Confidence            3478999999997432  1  22333   345566544    444445445542   467777654321         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHc
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKL  172 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l  172 (332)
                      .+....++.++.-...+-+.++..+
T Consensus       144 ~~~~~~Y~asK~a~~~~~~~la~e~  168 (254)
T 3kzv_A          144 FSSWGAYGSSKAALNHFAMTLANEE  168 (254)
T ss_dssp             SCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhhc
Confidence            2322245555555567777788776

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.50  E-value=0.00015  Score=64.01  Aligned_cols=150  Identities=15%  Similarity=0.119  Sum_probs=85.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHh---cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-ee---CC--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIAR---GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-AT---TD--   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~---~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~---~~--   74 (332)
                      +.+++.|+||+|.+|.+++..|+.   .|.       +|++.|+++  +.++....++.... + ..++. +.   ++  
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~-~-~~~~~~~~~Dv~~~~   73 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-------VMLVSARSE--SMLRQLKEELGAQQ-P-DLKVVLAAADLGTEA   73 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-------EEEEEESCH--HHHHHHHHHHHHHC-T-TSEEEEEECCTTSHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-------eEEEEeCCH--HHHHHHHHHHHhhC-C-CCeEEEEecCCCCHH
Confidence            346799999999999999999997   553       799999874  44443333333210 0 00111 01   11  


Q ss_pred             -hhhhc---------CCCc--EEEEeCCCCCCC-C-----CC---HHHHHHhhHHHHHHHHHHHHhhcC----CCeEEEE
Q 020022           75 -AVEAC---------TGVN--IAVMVGGFPRKE-G-----ME---RKDVMSKNVSIYKAQASALEQHAA----PNCKVLV  129 (332)
Q Consensus        75 -~~~al---------~~aD--iVi~~ag~~~~~-~-----~~---r~~~~~~n~~i~~~i~~~i~~~~~----~~~~viv  129 (332)
                       ..+++         ...|  ++|+.||..... +     .+   ....+..|+.....+.+.+..+..    +.+.||+
T Consensus        74 ~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~  153 (259)
T 1oaa_A           74 GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVN  153 (259)
T ss_dssp             HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEE
T ss_pred             HHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEE
Confidence             11111         1347  999999975321 1     23   234567787776666666654431    2356778


Q ss_pred             ecCcccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          130 VANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       130 ~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      +|.-...         .+.|....++.++.-...+-+.++..+.
T Consensus       154 isS~~~~---------~~~~~~~~Y~asKaa~~~~~~~la~e~~  188 (259)
T 1oaa_A          154 ISSLCAL---------QPYKGWGLYCAGKAARDMLYQVLAAEEP  188 (259)
T ss_dssp             ECCGGGT---------SCCTTCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             EcCchhc---------CCCCCccHHHHHHHHHHHHHHHHHhhCC
Confidence            7754331         1223223455566555677778888875

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.50  E-value=0.00011  Score=59.00  Aligned_cols=95  Identities=12%  Similarity=0.146  Sum_probs=62.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+|+| +|.+|..++..|...+.       ++.++|+++  ++++..+..+.       ..+....+..++++++|+
T Consensus        21 ~~~v~iiG-~G~iG~~~a~~l~~~g~-------~v~v~~r~~--~~~~~~a~~~~-------~~~~~~~~~~~~~~~~Di   83 (144)
T 3oj0_A           21 GNKILLVG-NGMLASEIAPYFSYPQY-------KVTVAGRNI--DHVRAFAEKYE-------YEYVLINDIDSLIKNNDV   83 (144)
T ss_dssp             CCEEEEEC-CSHHHHHHGGGCCTTTC-------EEEEEESCH--HHHHHHHHHHT-------CEEEECSCHHHHHHTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEcCCH--HHHHHHHHHhC-------CceEeecCHHHHhcCCCE
Confidence            47999999 69999999988876542       699999974  44433222221       122344567888999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                      ||.+.+.+. +-...                  .... ++.+++.+++|.++
T Consensus        84 vi~at~~~~-~~~~~------------------~~l~-~g~~vid~~~p~~~  115 (144)
T 3oj0_A           84 IITATSSKT-PIVEE------------------RSLM-PGKLFIDLGNPPNI  115 (144)
T ss_dssp             EEECSCCSS-CSBCG------------------GGCC-TTCEEEECCSSCSB
T ss_pred             EEEeCCCCC-cEeeH------------------HHcC-CCCEEEEccCCccC
Confidence            999876552 11110                  1122 35678889999764

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.49  E-value=0.0028  Score=55.95  Aligned_cols=159  Identities=8%  Similarity=0.046  Sum_probs=88.7

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC----
Q 020022            2 AKEPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD----   74 (332)
Q Consensus         2 ~~~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~----   74 (332)
                      +-+.+.+.||||+|  .+|.+++..|++.|.       .|++.|+++  +.++.....+.+.......-+... ++    
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-------~Vvi~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   73 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-------KLVFTYRKE--RSRKELEKLLEQLNQPEAHLYQIDVQSDEEV   73 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-------EEEEEESSG--GGHHHHHHHHGGGTCSSCEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCCcEEEEEccCCCHHHH
Confidence            33567889999876  799999999999874       799999984  334333333333221111111110 11    


Q ss_pred             ------hhhhcCCCcEEEEeCCCCCCC-------CCCHHHH---HHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           75 ------AVEACTGVNIAVMVGGFPRKE-------GMERKDV---MSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        75 ------~~~al~~aDiVi~~ag~~~~~-------~~~r~~~---~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                            ..+.+-..|++|..||+....       ..+++++   +..|....-..++....+..+.+.||++|.-...  
T Consensus        74 ~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~--  151 (256)
T 4fs3_A           74 INGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE--  151 (256)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT--
T ss_pred             HHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc--
Confidence                  123345789999999874311       2334443   2345544444555555554456778887753321  


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                             .+.|..-.++.++---..|-+.+|..++  |..|+
T Consensus       152 -------~~~~~~~~Y~asKaal~~ltr~lA~Ela--~~gIr  184 (256)
T 4fs3_A          152 -------FAVQNYNVMGVAKASLEANVKYLALDLG--PDNIR  184 (256)
T ss_dssp             -------SCCTTTHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -------cCcccchhhHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence                   1222222344444444566777777765  45666

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=97.48  E-value=0.00062  Score=66.00  Aligned_cols=99  Identities=7%  Similarity=0.029  Sum_probs=61.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc---CCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC---TGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al---~~a   82 (332)
                      |||+||| +|.||+.++..|+..|.       +|.++|+++  ++++.    +.....+ ...+..+++..+++   +++
T Consensus         3 m~IgvIG-~G~mG~~lA~~La~~G~-------~V~v~dr~~--~~~~~----l~~~~~~-g~gi~~~~~~~e~v~~l~~a   67 (482)
T 2pgd_A            3 ADIALIG-LAVMGQNLILNMNDHGF-------VVCAFNRTV--SKVDD----FLANEAK-GTKVLGAHSLEEMVSKLKKP   67 (482)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSST--HHHHH----HHHTTTT-TSSCEECSSHHHHHHHBCSS
T ss_pred             CeEEEEC-hHHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHH----HHhcccc-CCCeEEeCCHHHHHhhccCC
Confidence            5899999 79999999999998763       689999874  33332    2210000 02345556666665   599


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      |+||++...+               ..++++++.+..+..|+.+||..+|-.
T Consensus        68 DvVilaVp~~---------------~~v~~vl~~l~~~l~~g~iII~~s~~~  104 (482)
T 2pgd_A           68 RRIILLVKAG---------------QAVDNFIEKLVPLLDIGDIIIDGGNSE  104 (482)
T ss_dssp             CEEEECSCTT---------------HHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred             CEEEEeCCCh---------------HHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence            9999985321               112334445555554566666677643

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.48  E-value=0.00073  Score=59.18  Aligned_cols=152  Identities=16%  Similarity=0.087  Sum_probs=84.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~al   79 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       .+.+.+... .+.++....++..... ....+... ++   ..+.+
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~   76 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGA-------LVAIHYGNR-KEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALY   76 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC-SHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCc-hHHHHHHHHHHHhcCC-ceEEEecCcCCHHHHHHHH
Confidence            346899999999999999999998873       566654332 2334333333432110 00000000 01   11111


Q ss_pred             -------------CCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           80 -------------TGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        80 -------------~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                                   ...|++|+.||......   .+.   ...+..|+.....+.+.+..+-.+.++||++|.....    
T Consensus        77 ~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~----  152 (255)
T 3icc_A           77 SSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR----  152 (255)
T ss_dssp             HHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGT----
T ss_pred             HHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhc----
Confidence                         13899999999753221   222   3456678777777777666553234678787764431    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                           .+.|....++.++.....+-+.+++.+.
T Consensus       153 -----~~~~~~~~Y~asKaa~~~~~~~la~e~~  180 (255)
T 3icc_A          153 -----ISLPDFIAYSMTKGAINTMTFTLAKQLG  180 (255)
T ss_dssp             -----SCCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -----cCCCCcchhHHhHHHHHHHHHHHHHHHH
Confidence                 1223222345555555566677777664

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.47  E-value=0.00026  Score=62.79  Aligned_cols=156  Identities=13%  Similarity=0.086  Sum_probs=82.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      +.++|.|+||+|.+|.+++..|+..|.       ++.+.+... .+.++....++.... ....-+... ++   ..++ 
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~-------~v~i~~~r~-~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~   95 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGF-------NIGVHYHRD-AAGAQETLNAIVANG-GNGRLLSFDVANREQCREVL   95 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCc-hHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHH
Confidence            346899999999999999999999874       565544332 233333333332211 000001110 11   1222 


Q ss_pred             ------cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHH----HHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           79 ------CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        79 ------l~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~----~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                            +...|++|+.||......   .+   ....+..|+.....+.+    .+.+.. +.++||++|....       
T Consensus        96 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~g~iv~isS~~~-------  167 (267)
T 4iiu_A           96 EHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGAR-QGGRIITLSSVSG-------  167 (267)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCHHH-------
T ss_pred             HHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHh-------
Confidence                  237899999999864321   22   23455667654444443    343333 3467888775332       


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..  +.+....++.++..-..+-+.+++.+.  +..|+
T Consensus       168 ~~--~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  201 (267)
T 4iiu_A          168 VM--GNRGQVNYSAAKAGIIGATKALAIELA--KRKIT  201 (267)
T ss_dssp             HH--CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             cc--CCCCCchhHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence            11  223222455555555566667777764  33454

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.45  E-value=0.00066  Score=61.07  Aligned_cols=79  Identities=14%  Similarity=0.101  Sum_probs=49.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CCh--------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDA--------   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~--------   75 (332)
                      .++|.|+||+|.+|.+++..|+..|.       .|++.++++  ++++....++.........-+... ++.        
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~   82 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSNGI-------MVVLTCRDV--TKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLA   82 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHH
T ss_pred             CcEEEEecCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHH
Confidence            35799999999999999999998874       799999884  444433444433211100001110 111        


Q ss_pred             ---hhhcCCCcEEEEeCCCC
Q 020022           76 ---VEACTGVNIAVMVGGFP   92 (332)
Q Consensus        76 ---~~al~~aDiVi~~ag~~   92 (332)
                         .+.+...|++|+.||+.
T Consensus        83 ~~~~~~~g~iD~lv~nAg~~  102 (311)
T 3o26_A           83 DFIKTHFGKLDILVNNAGVA  102 (311)
T ss_dssp             HHHHHHHSSCCEEEECCCCC
T ss_pred             HHHHHhCCCCCEEEECCccc
Confidence               11234789999999975

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.45  E-value=0.00023  Score=63.32  Aligned_cols=155  Identities=13%  Similarity=0.090  Sum_probs=81.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV---   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~---   76 (332)
                      .++|.|+||+|.+|.+++..|+..|.       ++.+. +++  .+.++....++..... ...-+... ++   ..   
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~-------~V~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~   95 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGW-------RVGVNYAAN--REAADAVVAAITESGG-EAVAIPGDVGNAADIAAMF   95 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC--HHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCC--hhHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHH
Confidence            35799999999999999999999874       66665 444  2334333333322110 00000010 11   11   


Q ss_pred             ----hhcCCCcEEEEeCCCCCCCC----CCH---HHHHHhhHHHHHH----HHHHHHhhc-CCCeEEEEecCcccchHHH
Q 020022           77 ----EACTGVNIAVMVGGFPRKEG----MER---KDVMSKNVSIYKA----QASALEQHA-APNCKVLVVANPANTNALI  140 (332)
Q Consensus        77 ----~al~~aDiVi~~ag~~~~~~----~~r---~~~~~~n~~i~~~----i~~~i~~~~-~~~~~viv~tNP~~~~~~~  140 (332)
                          +.+...|+||+.||....++    .+.   ...+..|+.....    +.+.+.+.. .+.+.||++|.....    
T Consensus        96 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~----  171 (272)
T 4e3z_A           96 SAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAI----  171 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHH----
T ss_pred             HHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhc----
Confidence                22237899999999764322    232   3445666654444    444444321 124677777753321    


Q ss_pred             HHHhCCCCCCC-cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAK-NITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~-~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .  +.++. ..++.++.....+-+.+++.+.  +..|+
T Consensus       172 ---~--~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  205 (272)
T 4e3z_A          172 ---L--GSATQYVDYAASKAAIDTFTIGLAREVA--AEGIR  205 (272)
T ss_dssp             ---H--CCTTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---c--CCCCCcchhHHHHHHHHHHHHHHHHHHH--HcCcE
Confidence               1  11211 1345555555566677777763  23454

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.41  E-value=0.00049  Score=61.09  Aligned_cols=154  Identities=12%  Similarity=0.130  Sum_probs=82.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE---   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~---   77 (332)
                      .+++.|+||+|.+|.+++..|+..|.       .+.+.|.+. .+.++.....+.... ....-+... ++   ..+   
T Consensus        25 ~k~vlITGas~gIG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~   95 (269)
T 3gk3_A           25 KRVAFVTGGMGGLGAAISRRLHDAGM-------AVAVSHSER-NDHVSTWLMHERDAG-RDFKAYAVDVADFESCERCAE   95 (269)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-------EEEEEECSC-HHHHHHHHHHHHTTT-CCCEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCc-hHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHH
Confidence            35788999999999999999998874       688888553 233332222222111 000001110 11   111   


Q ss_pred             ----hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           78 ----ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        78 ----al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                          .+...|++|+.||.....   ..+.   ...+..|+..    .+.+.+.+.+..  .+.||++|....       .
T Consensus        96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~isS~~~-------~  166 (269)
T 3gk3_A           96 KVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR--FGRIVNIGSVNG-------S  166 (269)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCHHH-------H
T ss_pred             HHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCEEEEeCChhh-------c
Confidence                223789999999976422   1233   3345566654    444444444443  367778775322       1


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .  +.+....++.++.-...+-+.+++.+.  +..|+
T Consensus       167 ~--~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~  199 (269)
T 3gk3_A          167 R--GAFGQANYASAKAGIHGFTKTLALETA--KRGIT  199 (269)
T ss_dssp             H--CCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             c--CCCCcchHHHHHHHHHHHHHHHHHHhh--hcCCE
Confidence            1  223222455555555566667777664  23454

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.38  E-value=0.0037  Score=55.10  Aligned_cols=152  Identities=12%  Similarity=0.075  Sum_probs=84.2

Q ss_pred             CCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC----CccceEeeCCh--
Q 020022            4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVATTDA--   75 (332)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~----~~~~~~~~~~~--   75 (332)
                      +.++|.|+||+  |.+|.+++..|+..|.       .+.+.+.+.. ...+....++......    ...++....+.  
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~-------~v~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   90 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGA-------AVAITYASRA-QGAEENVKELEKTYGIKAKAYKCQVDSYESCEK   90 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSC-------EEEECBSSSS-SHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCC-------eEEEEeCCcc-hhHHHHHHHHHHhcCCceeEEecCCCCHHHHHH
Confidence            44689999998  8999999999998874       6888887742 2212223333321100    00111111111  


Q ss_pred             -----hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           76 -----VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        76 -----~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                           .+.+...|++|+.||.....   ..+.   ...+..|+.    ..+.+.+.+.+.. . +.+|+++.....    
T Consensus        91 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~-g~iv~isS~~~~----  164 (267)
T 3gdg_A           91 LVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-T-GSLVITASMSGH----  164 (267)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C-CEEEEECCGGGT----
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-C-ceEEEEcccccc----
Confidence                 12234679999999976432   1232   334556654    4444455555553 3 467777654321    


Q ss_pred             HHHhCCCCCCCc-EEEechHHHHHHHHHHHHHcC
Q 020022          141 LKEFAPSIPAKN-ITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       141 ~~~~~~~~~~~~-i~~~t~lds~r~~~~la~~l~  173 (332)
                          .+.+++.. .++.++.-...+-+.+++.++
T Consensus       165 ----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  194 (267)
T 3gdg_A          165 ----IANFPQEQTSYNVAKAGCIHMARSLANEWR  194 (267)
T ss_dssp             ----SCCSSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ----ccCCCCCCCcchHHHHHHHHHHHHHHHHhc
Confidence                01122222 456666666677788888876

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.38  E-value=0.0015  Score=58.77  Aligned_cols=157  Identities=16%  Similarity=0.182  Sum_probs=87.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-----ccceEeeCChh---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----LKGVVATTDAV---   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-----~~~~~~~~~~~---   76 (332)
                      .+++.|+||+|.+|.+++..|+..|.-    ...|.+.|+++  +.++....++.......     ..+++...+..   
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~----~~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~  106 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNG----DMKLILAARRL--EKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFI  106 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTT----CSEEEEEESCH--HHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHH
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCC----CceEEEEECCH--HHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence            468999999999999999999887631    11688999874  44444444443211000     00111111111   


Q ss_pred             ----hhcCCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           77 ----EACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        77 ----~al~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                          +.+...|++|+.||.....    ..+.   +..+..|+..    ++.+.+.+++..  .+.||++|.-...     
T Consensus       107 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~g~IV~isS~~~~-----  179 (287)
T 3rku_A          107 ENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN--SGDIVNLGSIAGR-----  179 (287)
T ss_dssp             HTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECCGGGT-----
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEECChhhc-----
Confidence                2234689999999975321    1232   3455666654    444445455543  3567777754321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.+..-.++.++.-...+-+.++..+.  +..|+
T Consensus       180 ----~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gIr  212 (287)
T 3rku_A          180 ----DAYPTGSIYCASKFAVGAFTDSLRKELI--NTKIR  212 (287)
T ss_dssp             ----SCCTTCHHHHHHHHHHHHHHHHHHHHTT--TSSCE
T ss_pred             ----CCCCCCchHHHHHHHHHHHHHHHHHHhh--hcCCE
Confidence                1223223455555555677778888775  34555

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.37  E-value=0.00023  Score=63.84  Aligned_cols=78  Identities=21%  Similarity=0.207  Sum_probs=48.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEE-EEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      |.++++||+|+|++|.||+.++..+....-      .+++ .+|.++  +.+.+  .|+..........+..+.+..+.+
T Consensus         1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~------~elva~~d~~~--~~~~g--~d~~~~~g~~~~~v~~~~dl~~~l   70 (273)
T 1dih_A            1 MHDANIRVAIAGAGGRMGRQLIQAALALEG------VQLGAALEREG--SSLLG--SDAGELAGAGKTGVTVQSSLDAVK   70 (273)
T ss_dssp             -CCCBEEEEETTTTSHHHHHHHHHHHHSTT------EECCCEECCTT--CTTCS--CCTTCSSSSSCCSCCEESCSTTTT
T ss_pred             CCCCCcEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCc--hhhhh--hhHHHHcCCCcCCceecCCHHHHh
Confidence            777889999999779999999988775321      2554 788764  12111  122211110112344556777788


Q ss_pred             CCCcEEEEe
Q 020022           80 TGVNIAVMV   88 (332)
Q Consensus        80 ~~aDiVi~~   88 (332)
                      +++|+||..
T Consensus        71 ~~~DvVIDf   79 (273)
T 1dih_A           71 DDFDVFIDF   79 (273)
T ss_dssp             TSCSEEEEC
T ss_pred             cCCCEEEEc
Confidence            899999954

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.37  E-value=0.0015  Score=57.91  Aligned_cols=155  Identities=14%  Similarity=0.171  Sum_probs=91.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeC-------C
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT-------D   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~-------~   74 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|++.|+++  +.++..+.++......   ...+++-..       .
T Consensus         9 gKvalVTGas~GIG~aia~~la~~Ga-------~Vvi~~~~~--~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~   79 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAGA-------RVILNDIRA--TLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSK   79 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEECCSCH--HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            46788999999999999999999874       799999984  4555444445432110   001111100       1


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           75 AVEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      ..+.+-..|++|..||......   .+   .+..+..|+.    ..+..++.+.+.. ..+.||+++.-...        
T Consensus        80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~~G~IVnisS~~~~--------  150 (255)
T 4g81_D           80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARN-SGGKIINIGSLTSQ--------  150 (255)
T ss_dssp             HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCGGGT--------
T ss_pred             HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcc-CCCEEEEEeehhhc--------
Confidence            2233457899999999864321   23   3344556654    5566677776543 34778888754331        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       151 -~~~~~~~~Y~asKaal~~ltr~lA~ela--~~gIr  183 (255)
T 4g81_D          151 -AARPTVAPYTAAKGGIKMLTCSMAAEWA--QFNIQ  183 (255)
T ss_dssp             -SBCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence             1222111344444444567777887776  45665

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=97.34  E-value=0.00046  Score=63.88  Aligned_cols=94  Identities=16%  Similarity=0.157  Sum_probs=56.9

Q ss_pred             CCCC--CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            1 MAKE--PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~--~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      |+..  .+||+||| .|.||..++..|...|.       +|.++|+++  +.++ .+.++  .       +....+..++
T Consensus         2 m~~~~~~~kIgIIG-~G~mG~slA~~L~~~G~-------~V~~~dr~~--~~~~-~a~~~--G-------~~~~~~~~e~   61 (341)
T 3ktd_A            2 MTTKDISRPVCILG-LGLIGGSLLRDLHAANH-------SVFGYNRSR--SGAK-SAVDE--G-------FDVSADLEAT   61 (341)
T ss_dssp             ----CCSSCEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSCH--HHHH-HHHHT--T-------CCEESCHHHH
T ss_pred             CCccCCCCEEEEEe-ecHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHH-HHHHc--C-------CeeeCCHHHH
Confidence            5542  47999999 79999999999998763       799999874  3332 11111  1       1223455555


Q ss_pred             cC----CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           79 CT----GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        79 l~----~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      ++    +||+||++.-                ...+.++.+.+..+ .|+++|+.++
T Consensus        62 ~~~a~~~aDlVilavP----------------~~~~~~vl~~l~~~-~~~~iv~Dv~  101 (341)
T 3ktd_A           62 LQRAAAEDALIVLAVP----------------MTAIDSLLDAVHTH-APNNGFTDVV  101 (341)
T ss_dssp             HHHHHHTTCEEEECSC----------------HHHHHHHHHHHHHH-CTTCCEEECC
T ss_pred             HHhcccCCCEEEEeCC----------------HHHHHHHHHHHHcc-CCCCEEEEcC
Confidence            54    5799999842                11233444555555 4677665554

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.34  E-value=0.00047  Score=60.82  Aligned_cols=150  Identities=15%  Similarity=0.094  Sum_probs=86.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-------CChhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-------TDAVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-------~~~~~a   78 (332)
                      ++|.|+||++.+|.+++..|+..|.       .|++.|+++  +.+.....+..+.. ....+++..       ....+.
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-------~V~~~~~~~--~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~v~~~~~~   72 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-------KVCFIDIDE--KRSADFAKERPNLF-YFHGDVADPLTLKKFVEYAMEK   72 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHTTCTTEE-EEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhcCCEE-EEEecCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999874       799999984  33332222111110 000000000       012344


Q ss_pred             cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCC
Q 020022           79 CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      +...|++|..||.....   ..+   .+..+..|+.    ..+...+.+.+.  + +.+|+++.-...         .+.
T Consensus        73 ~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~-G~IInisS~~~~---------~~~  140 (247)
T 3ged_A           73 LQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--K-GRIINIASTRAF---------QSE  140 (247)
T ss_dssp             HSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--T-CEEEEECCGGGT---------SCC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--C-CcEEEEeecccc---------cCC
Confidence            56789999999976432   223   3344556654    345555666543  3 567777653321         122


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      |..-.++.++---..|-+.+|..++  | +|+
T Consensus       141 ~~~~~Y~asKaal~~ltk~lA~ela--~-~Ir  169 (247)
T 3ged_A          141 PDSEAYASAKGGIVALTHALAMSLG--P-DVL  169 (247)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHT--T-TSE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHC--C-CCE
Confidence            2222344455455677788888886  3 565

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.33  E-value=0.0011  Score=58.30  Aligned_cols=153  Identities=18%  Similarity=0.136  Sum_probs=85.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc---CCccceEeeCChhhhc--
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEAC--   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~---~~~~~~~~~~~~~~al--   79 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|++.|++..++.+    ..+.....   ....+++......+.+  
T Consensus         9 GKvalVTGas~GIG~aiA~~la~~Ga-------~Vvi~~r~~~~~~~----~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~   77 (247)
T 4hp8_A            9 GRKALVTGANTGLGQAIAVGLAAAGA-------EVVCAARRAPDETL----DIIAKDGGNASALLIDFADPLAAKDSFTD   77 (247)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSCCHHHH----HHHHHTTCCEEEEECCTTSTTTTTTSSTT
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHcCC-------EEEEEeCCcHHHHH----HHHHHhCCcEEEEEccCCCHHHHHHHHHh
Confidence            36788999999999999999999874       79999987532211    11221110   0000111011111111  


Q ss_pred             CCCcEEEEeCCCCCCCC---CC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCC
Q 020022           80 TGVNIAVMVGGFPRKEG---ME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIP  149 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~  149 (332)
                      -..|++|..||+.....   .+   ++..+..|+.    ..+..++.+.+.. +.+.||+++.-...         .+.|
T Consensus        78 g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g-~~G~IVnisS~~~~---------~g~~  147 (247)
T 4hp8_A           78 AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG-RSGKVVNIASLLSF---------QGGI  147 (247)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCGGGT---------SCCS
T ss_pred             CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CCcEEEEEechhhC---------CCCC
Confidence            34799999999864321   23   3345566664    4556666666654 34678888753321         1222


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          150 AKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..-.++.++---..|-+.+|..++  +..|+
T Consensus       148 ~~~~Y~asKaav~~ltr~lA~Ela--~~gIr  176 (247)
T 4hp8_A          148 RVPSYTAAKHGVAGLTKLLANEWA--AKGIN  176 (247)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence            111234444444566777777766  45665

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.31  E-value=0.00035  Score=61.68  Aligned_cols=148  Identities=12%  Similarity=0.080  Sum_probs=79.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|++.|+++  +.++....++.... ....-+... ++   ..++ 
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~   73 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-------TVYITGRHL--DTLRVVAQEAQSLG-GQCVPVVCDSSQESEVRSLF   73 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHS-SEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHcC-CceEEEECCCCCHHHHHHHH
Confidence            456899999999999999999998873       789999874  34433333332211 000000000 11   1111 


Q ss_pred             -------cCCCcEEEEeCC--CC------CCC--CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           79 -------CTGVNIAVMVGG--FP------RKE--GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        79 -------l~~aDiVi~~ag--~~------~~~--~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                             +...|++|+.||  ..      ..+  ..+   ....+..|+.    ..+.+.+.+.+..  .+.||++|...
T Consensus        74 ~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~  151 (260)
T 2qq5_A           74 EQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG--QGLIVVISSPG  151 (260)
T ss_dssp             HHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT--CCEEEEECCGG
T ss_pred             HHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC--CcEEEEEcChh
Confidence                   345799999995  21      111  112   3344455543    3355555555543  35677887543


Q ss_pred             cchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          135 NTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      ..         .+ ++...++.++.-...+-+.++..+.
T Consensus       152 ~~---------~~-~~~~~Y~asK~a~~~~~~~la~e~~  180 (260)
T 2qq5_A          152 SL---------QY-MFNVPYGVGKAACDKLAADCAHELR  180 (260)
T ss_dssp             GT---------SC-CSSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             hc---------CC-CCCCchHHHHHHHHHHHHHHHHHhc
Confidence            31         01 1112344444444566666766653

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.30  E-value=0.0017  Score=51.17  Aligned_cols=38  Identities=24%  Similarity=0.311  Sum_probs=28.5

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |+. +++||.|+|+ |.+|+.++..|...|.       +++++|.++
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~~a~~l~~~g~-------~v~~~d~~~   39 (144)
T 2hmt_A            1 MGRIKNKQFAVIGL-GRFGGSIVKELHRMGH-------EVLAVDINE   39 (144)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTC-------CCEEEESCH
T ss_pred             CCCCcCCcEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence            543 3457999995 9999999999988763       688999874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.29  E-value=0.00039  Score=63.58  Aligned_cols=158  Identities=16%  Similarity=0.064  Sum_probs=82.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc--------hhhhhhhHHHHhhhhcC---CccceEeeC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--------AEALNGVKMELVDAAFP---LLKGVVATT   73 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~--------~~~l~~~~~dl~~~~~~---~~~~~~~~~   73 (332)
                      .+++.|+||+|.+|.+++..|+..|.       +|++.|++..        .+.++....++......   ...++....
T Consensus        27 gk~vlVTGas~GIG~aia~~la~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~   99 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAAEGA-------RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWD   99 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence            36789999999999999999999874       7999987610        12233233333321100   000000000


Q ss_pred             Chhhh-------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHH----HHHhhcC----CCeEEEEecC
Q 020022           74 DAVEA-------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQAS----ALEQHAA----PNCKVLVVAN  132 (332)
Q Consensus        74 ~~~~a-------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~----~i~~~~~----~~~~viv~tN  132 (332)
                      +..++       +...|++|+.||.....   ..+   ....+..|+.....+.+    .+.+...    +.+.||++|.
T Consensus       100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS  179 (322)
T 3qlj_A          100 QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS  179 (322)
T ss_dssp             HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence            11122       23789999999986432   123   23456677754444433    3333211    1257777775


Q ss_pred             cccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          133 PANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       133 P~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      -...       .  +.+..-.++.++.--..+-+.++..++  +..|+
T Consensus       180 ~~~~-------~--~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~  216 (322)
T 3qlj_A          180 GAGL-------Q--GSVGQGNYSAAKAGIATLTLVGAAEMG--RYGVT  216 (322)
T ss_dssp             HHHH-------H--CBTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             HHHc-------c--CCCCCccHHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence            3221       1  112222345555555566677777764  33454

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=97.28  E-value=0.00032  Score=61.97  Aligned_cols=66  Identities=12%  Similarity=0.170  Sum_probs=46.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      +|||+||| +|.+|+.++..|...+.       ++.++|+++  ++++.....+   .      +..+++..++++++|+
T Consensus         3 ~m~i~iiG-~G~mG~~~a~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~---g------~~~~~~~~~~~~~~D~   63 (259)
T 2ahr_A            3 AMKIGIIG-VGKMASAIIKGLKQTPH-------ELIISGSSL--ERSKEIAEQL---A------LPYAMSHQDLIDQVDL   63 (259)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTSSC-------EEEEECSSH--HHHHHHHHHH---T------CCBCSSHHHHHHTCSE
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEECCCH--HHHHHHHHHc---C------CEeeCCHHHHHhcCCE
Confidence            46999999 79999999999887651       789999874  3333221111   1      1234567788889999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||++.
T Consensus        64 Vi~~v   68 (259)
T 2ahr_A           64 VILGI   68 (259)
T ss_dssp             EEECS
T ss_pred             EEEEe
Confidence            99985

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.28  E-value=0.0035  Score=52.09  Aligned_cols=135  Identities=15%  Similarity=0.104  Sum_probs=75.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-   78 (332)
                      .+||.|+| .|.+|..++..|... |.       +++++|.++  ++++.    +......   -+... ++   +.++ 
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~-------~V~vid~~~--~~~~~----~~~~g~~---~~~gd~~~~~~l~~~~  101 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGK-------ISLGIEIRE--EAAQQ----HRSEGRN---VISGDATDPDFWERIL  101 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCS-------CEEEEESCH--HHHHH----HHHTTCC---EEECCTTCHHHHHTBC
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCC-------eEEEEECCH--HHHHH----HHHCCCC---EEEcCCCCHHHHHhcc
Confidence            35899999 699999999999886 64       689999874  33321    2211110   01111 11   2344 


Q ss_pred             -cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEec
Q 020022           79 -CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLT  157 (332)
Q Consensus        79 -l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t  157 (332)
                       +.++|+||++.+..           ..|.    .++..+++.+ |+..++..++-.+. ...+.+.  |.  +.+....
T Consensus       102 ~~~~ad~vi~~~~~~-----------~~~~----~~~~~~~~~~-~~~~ii~~~~~~~~-~~~l~~~--G~--~~vi~p~  160 (183)
T 3c85_A          102 DTGHVKLVLLAMPHH-----------QGNQ----TALEQLQRRN-YKGQIAAIAEYPDQ-LEGLLES--GV--DAAFNIY  160 (183)
T ss_dssp             SCCCCCEEEECCSSH-----------HHHH----HHHHHHHHTT-CCSEEEEEESSHHH-HHHHHHH--TC--SEEEEHH
T ss_pred             CCCCCCEEEEeCCCh-----------HHHH----HHHHHHHHHC-CCCEEEEEECCHHH-HHHHHHc--CC--CEEEchH
Confidence             78999999975311           2233    3334555655 45556555543222 2334443  33  3454544


Q ss_pred             hHHHHHHHHHHHHHcCCCCC
Q 020022          158 RLDHNRALGQISEKLNVQVS  177 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~  177 (332)
                      ..-+.++...+.+.++.+..
T Consensus       161 ~~~a~~l~~~~~~~~~~~~~  180 (183)
T 3c85_A          161 SEAGSGFARHVCKQLEPQFT  180 (183)
T ss_dssp             HHHHHHHHHHHHHHHCCCCC
T ss_pred             HHHHHHHHHHHHHhcCCccc
Confidence            44455666666677666544

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=97.26  E-value=0.001  Score=61.43  Aligned_cols=89  Identities=11%  Similarity=0.061  Sum_probs=56.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| .|.+|.+++..|...|.       ++.++|+++.  .....+.   ..      .+... +..+++++||+
T Consensus        16 ~~~I~IIG-~G~mG~alA~~L~~~G~-------~V~~~~~~~~--~~~~~a~---~~------G~~~~-~~~e~~~~aDv   75 (338)
T 1np3_A           16 GKKVAIIG-YGSQGHAHACNLKDSGV-------DVTVGLRSGS--ATVAKAE---AH------GLKVA-DVKTAVAAADV   75 (338)
T ss_dssp             TSCEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECCTTC--HHHHHHH---HT------TCEEE-CHHHHHHTCSE
T ss_pred             CCEEEEEC-chHHHHHHHHHHHHCcC-------EEEEEECChH--HHHHHHH---HC------CCEEc-cHHHHHhcCCE
Confidence            46899999 79999999999988763       6889998742  2111111   11      11233 66788999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHH-HHHhhcCCCeEEEE
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQAS-ALEQHAAPNCKVLV  129 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~-~i~~~~~~~~~viv  129 (332)
                      ||++.-.                ....++.+ .+..+.+|+++|+.
T Consensus        76 Vilavp~----------------~~~~~v~~~~i~~~l~~~~ivi~  105 (338)
T 1np3_A           76 VMILTPD----------------EFQGRLYKEEIEPNLKKGATLAF  105 (338)
T ss_dssp             EEECSCH----------------HHHHHHHHHHTGGGCCTTCEEEE
T ss_pred             EEEeCCc----------------HHHHHHHHHHHHhhCCCCCEEEE
Confidence            9998421                11234555 66666556665543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.25  E-value=0.00073  Score=54.67  Aligned_cols=34  Identities=6%  Similarity=0.057  Sum_probs=29.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ...||.|+| +|.+|+.++..|...+.       +++++|.+
T Consensus         2 ~~~~vlI~G-~G~vG~~la~~L~~~g~-------~V~vid~~   35 (153)
T 1id1_A            2 RKDHFIVCG-HSILAINTILQLNQRGQ-------NVTVISNL   35 (153)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHTTC-------CEEEEECC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCC-------CEEEEECC
Confidence            456899999 69999999999988663       69999986

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.25  E-value=0.0011  Score=52.69  Aligned_cols=38  Identities=18%  Similarity=0.217  Sum_probs=29.5

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |+. ++++|.|+| +|.+|+.++..|...|.       +++++|.++
T Consensus         1 m~~~~~~~v~I~G-~G~iG~~la~~L~~~g~-------~V~~id~~~   39 (141)
T 3llv_A            1 MTENGRYEYIVIG-SEAAGVGLVRELTAAGK-------KVLAVDKSK   39 (141)
T ss_dssp             -----CCSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEEESCH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEECCH
Confidence            543 356899999 59999999999998764       699999874

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.21  E-value=0.00058  Score=63.40  Aligned_cols=105  Identities=12%  Similarity=0.123  Sum_probs=56.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcc-cCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      +++||+|+||+|.+|+.++..|...+ .-+  ..++++++-...+    .+...+-.+..+.....+....-..++++++
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~--~~~ei~~l~s~~~----agk~~~~~~~~l~~~~~~~~~~~~~~~~~~~   81 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYAD--GRLRIGALTAATS----AGSTLGEHHPHLTPLAHRVVEPTEAAVLGGH   81 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHT--TSEEEEEEEESSC----TTSBGGGTCTTCGGGTTCBCEECCHHHHTTC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCC--ccEEEEEEECCCc----CCCchhhhcccccccceeeeccCCHHHhcCC
Confidence            34799999999999999999998754 000  0126666642211    1111111111110001111111124557899


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      |+||++.|...                .+++++.+ +.   ++++|..|.|-
T Consensus        82 DvVf~alg~~~----------------s~~~~~~~-~~---G~~vIDlSa~~  113 (352)
T 2nqt_A           82 DAVFLALPHGH----------------SAVLAQQL-SP---ETLIIDCGADF  113 (352)
T ss_dssp             SEEEECCTTSC----------------CHHHHHHS-CT---TSEEEECSSTT
T ss_pred             CEEEECCCCcc----------------hHHHHHHH-hC---CCEEEEECCCc
Confidence            99999876431                22455555 32   46788888774

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.21  E-value=0.0009  Score=52.65  Aligned_cols=34  Identities=21%  Similarity=0.496  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .|||+|+| +|.+|+.++..|...+.       +++++|.++
T Consensus         4 ~m~i~IiG-~G~iG~~~a~~L~~~g~-------~v~~~d~~~   37 (140)
T 1lss_A            4 GMYIIIAG-IGRVGYTLAKSLSEKGH-------DIVLIDIDK   37 (140)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESCH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCH
Confidence            46999999 59999999999988653       799999874

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.18  E-value=0.00066  Score=58.44  Aligned_cols=66  Identities=15%  Similarity=0.133  Sum_probs=45.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +++||+||| +|.+|+.++..|...+.       ++.++|+++  ++++    .+.+.      .+... +..++++++|
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~-------~V~~~~r~~--~~~~----~~~~~------g~~~~-~~~~~~~~~D   85 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGF-------KVVVGSRNP--KRTA----RLFPS------AAQVT-FQEEAVSSPE   85 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTC-------CEEEEESSH--HHHH----HHSBT------TSEEE-EHHHHTTSCS
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHH----HHHHc------CCcee-cHHHHHhCCC
Confidence            347899999 79999999999987653       688999874  3222    12111      12223 5678889999


Q ss_pred             EEEEeCC
Q 020022           84 IAVMVGG   90 (332)
Q Consensus        84 iVi~~ag   90 (332)
                      +||++..
T Consensus        86 vVi~av~   92 (215)
T 2vns_A           86 VIFVAVF   92 (215)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999864

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.14  E-value=0.0021  Score=56.96  Aligned_cols=156  Identities=14%  Similarity=0.102  Sum_probs=86.9

Q ss_pred             CCC--CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeC--
Q 020022            1 MAK--EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT--   73 (332)
Q Consensus         1 m~~--~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~--   73 (332)
                      |.+  +.+.+.|+||++.+|.+++..|+..|.       .+++.|+++.  ... ....+......   ...+++...  
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga-------~Vv~~~r~~~--~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v   70 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERA-------IPVVFARHAP--DGA-FLDALAQRQPRATYLPVELQDDAQC   70 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCC--CHH-HHHHHHHHCTTCEEEECCTTCHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEECCcc--cHH-HHHHHHhcCCCEEEEEeecCCHHHH
Confidence            554  457888999999999999999999874       7899998753  221 11122211100   000110000  


Q ss_pred             -----ChhhhcCCCcEEEEeCCCCCCCC--CCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           74 -----DAVEACTGVNIAVMVGGFPRKEG--MERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        74 -----~~~~al~~aDiVi~~ag~~~~~~--~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                           ...+.+-..|++|..||+.....  .+.+   ..+..|+    ...+...+.+++.  . +.||+++.-...   
T Consensus        71 ~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~-G~IVnisS~~~~---  144 (258)
T 4gkb_A           71 RDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--R-GAIVNISSKTAV---  144 (258)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--T-CEEEEECCTHHH---
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--C-CeEEEEeehhhc---
Confidence                 12233557899999999864332  3333   3345554    3456666666543  2 567787753321   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .  +.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       145 ----~--~~~~~~~Y~asKaav~~ltr~lA~ela--~~gIr  177 (258)
T 4gkb_A          145 ----T--GQGNTSGYCASKGAQLALTREWAVALR--EHGVR  177 (258)
T ss_dssp             ----H--CCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             ----c--CCCCchHHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence                1  223222344455445567777887776  34554

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.05  E-value=0.00097  Score=59.97  Aligned_cols=80  Identities=10%  Similarity=0.115  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee--CChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT--TDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~--~~~~~al~~   81 (332)
                      +.+++.|+||+|.+|.+++..|+..|.       +|+++|++.  ++++....++.............+  .+..+++++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~-------~V~i~~R~~--~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  188 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGA-------EVVLCGRKL--DKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG  188 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHh
Confidence            346899999999999999999998763       689999874  444434444432110000111111  123567788


Q ss_pred             CcEEEEeCCCC
Q 020022           82 VNIAVMVGGFP   92 (332)
Q Consensus        82 aDiVi~~ag~~   92 (332)
                      +|+||+++|..
T Consensus       189 ~DvlVn~ag~g  199 (287)
T 1lu9_A          189 AHFVFTAGAIG  199 (287)
T ss_dssp             CSEEEECCCTT
T ss_pred             CCEEEECCCcc
Confidence            99999999764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.03  E-value=0.0018  Score=64.67  Aligned_cols=121  Identities=17%  Similarity=0.143  Sum_probs=62.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC-------chhhhhhhHHHHhhhhcCCccceEeeCChh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-------AAEALNGVKMELVDAAFPLLKGVVATTDAV   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-------~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~   76 (332)
                      ..+.+.|+||+|.+|.+++..|+..|.       .|++.|+..       +.+.++....++..........+....+..
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~   90 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGA-------KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGA   90 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHH
Confidence            346889999999999999999999874       789988721       123333333333322111000111111112


Q ss_pred             h-------hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCc
Q 020022           77 E-------ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        77 ~-------al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      +       .+...|++|+.||+....   ..+.   +..+..|+.-    ++.+.+.+++..  .+.||++|..
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~--~g~IV~isS~  162 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN--YGRIIMTSSN  162 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEECCH
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEECCH
Confidence            2       233679999999986432   2233   3445666644    444455555543  3678887753

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=97.01  E-value=0.00077  Score=60.61  Aligned_cols=64  Identities=19%  Similarity=0.290  Sum_probs=46.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.+|+.++..|...|.       ++.++|+++  ++++    .+...      .+..+++..++++++|+|
T Consensus         1 m~i~iiG-~G~mG~~~a~~l~~~g~-------~V~~~~~~~--~~~~----~~~~~------g~~~~~~~~~~~~~~Dvv   60 (296)
T 2gf2_A            1 MPVGFIG-LGNMGNPMAKNLMKHGY-------PLIIYDVFP--DACK----EFQDA------GEQVVSSPADVAEKADRI   60 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHTTC-------CEEEECSST--HHHH----HHHTT------TCEECSSHHHHHHHCSEE
T ss_pred             CeEEEEe-ccHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHH----HHHHc------CCeecCCHHHHHhcCCEE
Confidence            4899999 79999999999988763       689999874  3332    12221      233455677888999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        61 i~~v   64 (296)
T 2gf2_A           61 ITML   64 (296)
T ss_dssp             EECC
T ss_pred             EEeC
Confidence            9984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.01  E-value=0.0069  Score=48.90  Aligned_cols=35  Identities=11%  Similarity=0.275  Sum_probs=29.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..++|+|+| +|.+|+.++..|...|.       +++++|+++
T Consensus        18 ~~~~v~IiG-~G~iG~~la~~L~~~g~-------~V~vid~~~   52 (155)
T 2g1u_A           18 KSKYIVIFG-CGRLGSLIANLASSSGH-------SVVVVDKNE   52 (155)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESCG
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCH
Confidence            347999999 69999999999988763       799999874

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.01  E-value=0.011  Score=52.28  Aligned_cols=152  Identities=13%  Similarity=0.101  Sum_probs=87.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh--hHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG--VKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~--~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      -+.+.|+||++.+|.+++..|+..|.       .|.+.|+++.+...+.  ...|+.+....  ..  ......+.+-..
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga-------~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v--~~--~~~~~~~~~G~i   79 (261)
T 4h15_A           11 GKRALITAGTKGAGAATVSLFLELGA-------QVLTTARARPEGLPEELFVEADLTTKEGC--AI--VAEATRQRLGGV   79 (261)
T ss_dssp             TCEEEESCCSSHHHHHHHHHHHHTTC-------EEEEEESSCCTTSCTTTEEECCTTSHHHH--HH--HHHHHHHHTSSC
T ss_pred             CCEEEEeccCcHHHHHHHHHHHHcCC-------EEEEEECCchhCCCcEEEEEcCCCCHHHH--HH--HHHHHHHHcCCC
Confidence            36888999999999999999999874       7999998753211111  11232221100  00  001233456678


Q ss_pred             cEEEEeCCCCCCC-----CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022           83 NIAVMVGGFPRKE-----GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA  150 (332)
Q Consensus        83 DiVi~~ag~~~~~-----~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~  150 (332)
                      |++|..||.....     ..+.+   ..+..|+    ...+...+.+.+..  .+.||+++.-...         .+.|.
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--~G~Iv~isS~~~~---------~~~~~  148 (261)
T 4h15_A           80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG--SGVVVHVTSIQRV---------LPLPE  148 (261)
T ss_dssp             SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT---------SCCTT
T ss_pred             CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC--CceEEEEEehhhc---------cCCCC
Confidence            9999999975321     12333   3455555    45677777777764  4677777753321         12222


Q ss_pred             Cc-EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          151 KN-ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       151 ~~-i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .. .++.++---..|-+.+|..++  +..|+
T Consensus       149 ~~~~Y~asKaal~~lt~~lA~Ela--~~gIr  177 (261)
T 4h15_A          149 STTAYAAAKAALSTYSKAMSKEVS--PKGVR  177 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence            22 233444444566777777765  45665

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.98  E-value=0.001  Score=61.02  Aligned_cols=153  Identities=16%  Similarity=0.124  Sum_probs=78.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh--cCCccceEe-eC------Chh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FPLLKGVVA-TT------DAV   76 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~--~~~~~~~~~-~~------~~~   76 (332)
                      ++|.||||+|.+|.+++..|+..|.       ++++++++.  +.++.....+....  .....++.. ..      +..
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~-------~v~~v~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   73 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATL--RDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVA   73 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTT-------CCEEEEEEE--SCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-------ceEEEEeec--CcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHH
Confidence            5799999999999999999998763       355555442  12221111111110  000011111 11      112


Q ss_pred             hhcC-----CCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHH----HHHhhcCCCeEEEEecCcccchHHHH
Q 020022           77 EACT-----GVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        77 ~al~-----~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~----~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                      ++++     ..|++|+.||+....   ..+   ....+..|+.....+.+    .+++..  ..+||++|.-...     
T Consensus        74 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--~g~IV~isS~~~~-----  146 (327)
T 1jtv_A           74 AARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG--SGRVLVTGSVGGL-----  146 (327)
T ss_dssp             HHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEEGGGT-----
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCEEEEECCcccc-----
Confidence            2333     489999999975321   122   23455666655444444    455443  3567777643321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.+....++.++.-...+-+.++..+.  +..|+
T Consensus       147 ----~~~~~~~~Y~aSK~a~~~~~~~la~el~--~~gI~  179 (327)
T 1jtv_A          147 ----MGLPFNDVYCASKFALEGLCESLAVLLL--PFGVH  179 (327)
T ss_dssp             ----SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ----cCCCCChHHHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence                1222222445555555566666666553  33454

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.98  E-value=0.0017  Score=57.98  Aligned_cols=75  Identities=19%  Similarity=0.253  Sum_probs=47.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEE-EEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      +++||+|+||+|.||+.++..+...+-      .+|+ .+|++..  ...+  .|+.+... ....+.++.+..+.++++
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~------~eLv~~~d~~~~--~~~G--~d~gel~g-~~~gv~v~~dl~~ll~~~   74 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPD------ATLVGALDRTGS--PQLG--QDAGAFLG-KQTGVALTDDIERVCAEA   74 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTT------EEEEEEBCCTTC--TTTT--SBTTTTTT-CCCSCBCBCCHHHHHHHC
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEEecCc--cccc--ccHHHHhC-CCCCceecCCHHHHhcCC
Confidence            468999999999999999998876431      2444 4687631  1111  22222111 112455567788888899


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+||...
T Consensus        75 DVVIDfT   81 (272)
T 4f3y_A           75 DYLIDFT   81 (272)
T ss_dssp             SEEEECS
T ss_pred             CEEEEcC
Confidence            9998863

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.93  E-value=0.0047  Score=56.91  Aligned_cols=103  Identities=17%  Similarity=0.290  Sum_probs=56.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH-HHhhhhcCCccceEeeC--Chhhhc
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM-ELVDAAFPLLKGVVATT--DAVEAC   79 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~-dl~~~~~~~~~~~~~~~--~~~~al   79 (332)
                      +.|+||+|+||+|.+|..+...|....-      +++..+..... ....|... +. +-.+.......+..  +. +++
T Consensus         2 ~~M~kv~IvGatG~vG~~l~~~L~~~p~------~el~~l~s~~~-~~saGk~~~~~-~p~~~~~~~~~v~~~~~~-~~~   72 (337)
T 3dr3_A            2 NAMLNTLIVGASGYAGAELVTYVNRHPH------MNITALTVSAQ-SNDAGKLISDL-HPQLKGIVELPLQPMSDI-SEF   72 (337)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHCTT------EEEEEEEEETT-CTTTTSBHHHH-CGGGTTTCCCBEEEESSG-GGT
T ss_pred             CCceEEEEECCCChHHHHHHHHHHhCCC------CcEEEEEecCc-hhhcCCchHHh-CccccCccceeEeccCCH-HHH
Confidence            3457999999999999999998887432      26666644320 01122211 11 11111001222222  33 445


Q ss_pred             -CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           80 -TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        80 -~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                       +++|+||++.+.                ...+++++.+.+.   ++++|-.|.+
T Consensus        73 ~~~~Dvvf~a~p~----------------~~s~~~~~~~~~~---g~~vIDlSa~  108 (337)
T 3dr3_A           73 SPGVDVVFLATAH----------------EVSHDLAPQFLEA---GCVVFDLSGA  108 (337)
T ss_dssp             CTTCSEEEECSCH----------------HHHHHHHHHHHHT---TCEEEECSST
T ss_pred             hcCCCEEEECCCh----------------HHHHHHHHHHHHC---CCEEEEcCCc
Confidence             899999998541                2234556655443   3567777765

>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}

Probab=96.92  E-value=0.00086  Score=58.47  Aligned_cols=36  Identities=14%  Similarity=0.117  Sum_probs=30.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI   44 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~   44 (332)
                      |....|||+||| +|.+|.+++..|...|.       +|.++|.
T Consensus         2 ~~~~~mkI~IIG-~G~~G~sLA~~L~~~G~-------~V~~~~~   37 (232)
T 3dfu_A            2 MQAPRLRVGIFD-DGSSTVNMAEKLDSVGH-------YVTVLHA   37 (232)
T ss_dssp             -CCCCCEEEEEC-CSCCCSCHHHHHHHTTC-------EEEECSS
T ss_pred             CCCCCcEEEEEe-eCHHHHHHHHHHHHCCC-------EEEEecC
Confidence            555678999999 79999999999998763       7888875

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=96.91  E-value=0.003  Score=56.70  Aligned_cols=36  Identities=17%  Similarity=0.171  Sum_probs=30.0

Q ss_pred             CCCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            3 KEPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         3 ~~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ++.+++.|+||+  |.+|.+++..|+..|.       +|++.|++
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~-------~V~~~~r~   43 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA-------EILVGTWV   43 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTC-------EEEEEEEH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCC-------eEEEeecc
Confidence            345789999988  9999999999998874       78888753

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=96.88  E-value=0.0018  Score=59.67  Aligned_cols=61  Identities=18%  Similarity=0.134  Sum_probs=46.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| .|.+|+.++..+...|.       +|..+|+++.  ...               .+....++.+.+++||+
T Consensus       164 g~~vgIIG-~G~iG~~vA~~l~~~G~-------~V~~~dr~~~--~~~---------------g~~~~~~l~ell~~aDv  218 (333)
T 3ba1_A          164 GKRVGIIG-LGRIGLAVAERAEAFDC-------PISYFSRSKK--PNT---------------NYTYYGSVVELASNSDI  218 (333)
T ss_dssp             TCCEEEEC-CSHHHHHHHHHHHTTTC-------CEEEECSSCC--TTC---------------CSEEESCHHHHHHTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEECCCch--hcc---------------CceecCCHHHHHhcCCE
Confidence            46899999 79999999999987653       6899998752  111               11233567788999999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |+++.-
T Consensus       219 Vil~vP  224 (333)
T 3ba1_A          219 LVVACP  224 (333)
T ss_dssp             EEECSC
T ss_pred             EEEecC
Confidence            999854

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.87  E-value=0.0043  Score=55.78  Aligned_cols=75  Identities=21%  Similarity=0.163  Sum_probs=47.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      +++||+|+||+|.||+.++..+....-      ++ +..+|.++. . ..|  .|+..........+.++.+..+.+.++
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~------~eLvg~vd~~~~-~-~~G--~d~gel~G~~~~gv~v~~dl~~ll~~a   89 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKD------VELCAVLVRKGS-S-FVD--KDASILIGSDFLGVRITDDPESAFSNT   89 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSS------EEEEEEBCCTTC-T-TTT--SBGGGGTTCSCCSCBCBSCHHHHTTSC
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCCc-c-ccc--cchHHhhccCcCCceeeCCHHHHhcCC
Confidence            457999999999999999998876431      24 455677531 1 111  233322111123455667888888999


Q ss_pred             cEEEEe
Q 020022           83 NIAVMV   88 (332)
Q Consensus        83 DiVi~~   88 (332)
                      |+||-.
T Consensus        90 DVvIDF   95 (288)
T 3ijp_A           90 EGILDF   95 (288)
T ss_dssp             SEEEEC
T ss_pred             CEEEEc
Confidence            999865

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.87  E-value=0.0036  Score=57.78  Aligned_cols=60  Identities=20%  Similarity=0.163  Sum_probs=45.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+||| .|.||+.+|..+...|+       +|..+|+.+.  ...               ......++.+.+++||+
T Consensus       171 gktiGIIG-lG~IG~~vA~~l~~~G~-------~V~~~dr~~~--~~~---------------~~~~~~sl~ell~~aDv  225 (340)
T 4dgs_A          171 GKRIGVLG-LGQIGRALASRAEAFGM-------SVRYWNRSTL--SGV---------------DWIAHQSPVDLARDSDV  225 (340)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTC-------EEEEECSSCC--TTS---------------CCEECSSHHHHHHTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEcCCcc--ccc---------------CceecCCHHHHHhcCCE
Confidence            47999999 79999999999987654       7999998742  100               01123467889999999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      |++..
T Consensus       226 Vil~v  230 (340)
T 4dgs_A          226 LAVCV  230 (340)
T ss_dssp             EEECC
T ss_pred             EEEeC
Confidence            99985

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.83  E-value=0.0016  Score=57.19  Aligned_cols=145  Identities=17%  Similarity=0.194  Sum_probs=85.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhh--------HHHHhhhhcCCccceEeeCChh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV--------KMELVDAAFPLLKGVVATTDAV   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~--------~~dl~~~~~~~~~~~~~~~~~~   76 (332)
                      -+.+.|+||++.+|.+++..|+..|.       .|++.|+++  +.++..        ..|+.+..     .   .....
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga-------~Vv~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~-----~---v~~~~   73 (242)
T 4b79_A           11 GQQVLVTGGSSGIGAAIAMQFAELGA-------EVVALGLDA--DGVHAPRHPRIRREELDITDSQ-----R---LQRLF   73 (242)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESST--TSTTSCCCTTEEEEECCTTCHH-----H---HHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHhhhhcCCeEEEEecCCCHH-----H---HHHHH
Confidence            36889999999999999999999874       799999985  333211        11111110     0   01133


Q ss_pred             hhcCCCcEEEEeCCCCCCC-CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCC
Q 020022           77 EACTGVNIAVMVGGFPRKE-GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~-~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      +.+...|++|..||+.+.. ..+   .+..+..|+.    ..+...+.+++.   .+.||+++.-...         .+.
T Consensus        74 ~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~---~G~IVnisS~~~~---------~~~  141 (242)
T 4b79_A           74 EALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR---GGSILNIASMYST---------FGS  141 (242)
T ss_dssp             HHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---CEEEEEECCGGGT---------SCC
T ss_pred             HhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCeEEEEeecccc---------CCC
Confidence            5577899999999986422 122   3344555653    344555555442   3678888753321         122


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      |..-.++.++---..|-+.+|..++  |..|+
T Consensus       142 ~~~~~Y~asKaav~~ltr~lA~Ela--~~gIr  171 (242)
T 4b79_A          142 ADRPAYSASKGAIVQLTRSLACEYA--AERIR  171 (242)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence            2212344444444567777777765  45665

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=96.82  E-value=0.0034  Score=58.04  Aligned_cols=76  Identities=11%  Similarity=0.075  Sum_probs=41.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +++||+|+||+|.+|..++..|...+.      ++++.+-....    .+...+-.+..+.....+... +.. ++.++|
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~------~elv~v~s~~~----~g~~~~~~~~~~~g~~~~~~~-~~~-~~~~vD   70 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPY------LEVKQVTSRRF----AGEPVHFVHPNLRGRTNLKFV-PPE-KLEPAD   70 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTT------EEEEEEBCSTT----TTSBGGGTCGGGTTTCCCBCB-CGG-GCCCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCC------cEEEEEECchh----hCchhHHhCchhcCccccccc-chh-HhcCCC
Confidence            357999999999999999998876431      26555433221    111111111111100122222 222 368999


Q ss_pred             EEEEeCCC
Q 020022           84 IAVMVGGF   91 (332)
Q Consensus        84 iVi~~ag~   91 (332)
                      +|+++.|.
T Consensus        71 vV~~a~g~   78 (345)
T 2ozp_A           71 ILVLALPH   78 (345)
T ss_dssp             EEEECCCT
T ss_pred             EEEEcCCc
Confidence            99998653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.80  E-value=0.004  Score=59.84  Aligned_cols=151  Identities=22%  Similarity=0.218  Sum_probs=82.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------h
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------E   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~-------~   77 (332)
                      .+.+.|+||+|.+|.+++..|+..|.       ++++.|+++..+.+.....++. .. .....+....+..       +
T Consensus       213 gk~~LVTGgsgGIG~aiA~~La~~Ga-------~Vvl~~r~~~~~~l~~~~~~~~-~~-~~~~Dvtd~~~v~~~~~~~~~  283 (454)
T 3u0b_A          213 GKVAVVTGAARGIGATIAEVFARDGA-------TVVAIDVDGAAEDLKRVADKVG-GT-ALTLDVTADDAVDKITAHVTE  283 (454)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEECGGGHHHHHHHHHHHT-CE-EEECCTTSTTHHHHHHHHHHH
T ss_pred             CCEEEEeCCchHHHHHHHHHHHHCCC-------EEEEEeCCccHHHHHHHHHHcC-Ce-EEEEecCCHHHHHHHHHHHHH
Confidence            36899999999999999999998764       7899998642222221111110 00 0000000001111       1


Q ss_pred             hcCC-CcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcC--CCeEEEEecCcccchHHHHHHhCCCC
Q 020022           78 ACTG-VNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        78 al~~-aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~--~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      .+.+ .|+||+.||+....   ..+.   +..+..|+.-...+.+.+.....  +...||++|.-...       .  +.
T Consensus       284 ~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~-------~--g~  354 (454)
T 3u0b_A          284 HHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGI-------A--GN  354 (454)
T ss_dssp             HSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHH-------H--CC
T ss_pred             HcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhC-------C--CC
Confidence            2224 89999999986532   1333   34567788777777777765411  24567777753221       1  22


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcC
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                      +..-.++.++.--..|-+.++..+.
T Consensus       355 ~g~~~YaasKaal~~l~~~la~e~~  379 (454)
T 3u0b_A          355 RGQTNYATTKAGMIGLAEALAPVLA  379 (454)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            2122344444433456666666654

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=96.79  E-value=0.0031  Score=57.51  Aligned_cols=70  Identities=14%  Similarity=0.207  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ..++|+||| +|.+|..++..|+.. +. .     ++.++|+++  ++++..+..+..       ++....+..+++++|
T Consensus       134 ~~~~igiIG-~G~~g~~~a~~l~~~~g~-~-----~V~v~dr~~--~~~~~l~~~~~~-------~~~~~~~~~e~v~~a  197 (312)
T 2i99_A          134 SSEVLCILG-AGVQAYSHYEIFTEQFSF-K-----EVRIWNRTK--ENAEKFADTVQG-------EVRVCSSVQEAVAGA  197 (312)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHHCCC-S-----EEEEECSSH--HHHHHHHHHSSS-------CCEECSSHHHHHTTC
T ss_pred             CCcEEEEEC-CcHHHHHHHHHHHHhCCC-c-----EEEEEcCCH--HHHHHHHHHhhC-------CeEEeCCHHHHHhcC
Confidence            457999999 799999999988764 42 2     799999874  443322221110       234456788899999


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+||++.
T Consensus       198 DiVi~at  204 (312)
T 2i99_A          198 DVIITVT  204 (312)
T ss_dssp             SEEEECC
T ss_pred             CEEEEEe
Confidence            9999874

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.79  E-value=0.006  Score=57.84  Aligned_cols=136  Identities=15%  Similarity=0.186  Sum_probs=74.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-c
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-C   79 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-l   79 (332)
                      .++|.|+| .|.+|+.++..|...+.       +++++|.++  ++++.    +......   -+... ++   +.++ +
T Consensus         4 ~~~viIiG-~Gr~G~~va~~L~~~g~-------~vvvId~d~--~~v~~----~~~~g~~---vi~GDat~~~~L~~agi   66 (413)
T 3l9w_A            4 GMRVIIAG-FGRFGQITGRLLLSSGV-------KMVVLDHDP--DHIET----LRKFGMK---VFYGDATRMDLLESAGA   66 (413)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEEECCH--HHHHH----HHHTTCC---CEESCTTCHHHHHHTTT
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCC-------CEEEEECCH--HHHHH----HHhCCCe---EEEcCCCCHHHHHhcCC
Confidence            46899999 69999999999998764       699999984  33321    2221111   11111 11   2233 7


Q ss_pred             CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-CcccchHHHHHHhCCCCCCCcEEEech
Q 020022           80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANTNALILKEFAPSIPAKNITCLTR  158 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~~~~~~~~~~~~~~~~~i~~~t~  158 (332)
                      .+||+||++.+-.           ..|+    .++..+++.. |+..||.-+ ++..  ...+.+.  |.  +.++.-+.
T Consensus        67 ~~A~~viv~~~~~-----------~~n~----~i~~~ar~~~-p~~~Iiara~~~~~--~~~L~~~--Ga--d~Vi~~~~  124 (413)
T 3l9w_A           67 AKAEVLINAIDDP-----------QTNL----QLTEMVKEHF-PHLQIIARARDVDH--YIRLRQA--GV--EKPERETF  124 (413)
T ss_dssp             TTCSEEEECCSSH-----------HHHH----HHHHHHHHHC-TTCEEEEEESSHHH--HHHHHHT--TC--SSCEETTH
T ss_pred             CccCEEEECCCCh-----------HHHH----HHHHHHHHhC-CCCeEEEEECCHHH--HHHHHHC--CC--CEEECccH
Confidence            8999999985311           2333    4555666666 555565544 4433  2223332  32  23333333


Q ss_pred             HHHHHHHHHHHHHcCCCCCCe
Q 020022          159 LDHNRALGQISEKLNVQVSDV  179 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v  179 (332)
                      .-+.++-..+-..+|+++..+
T Consensus       125 ~~a~~la~~~L~~lg~~~~~~  145 (413)
T 3l9w_A          125 EGALKTGRLALESLGLGPYEA  145 (413)
T ss_dssp             HHHHHHHHHHHHHTTCCHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHH
Confidence            344455555555556655444

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.78  E-value=0.0021  Score=62.37  Aligned_cols=116  Identities=14%  Similarity=0.114  Sum_probs=70.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch-hhhhhhHHHHhhhhcCCccceEe-e---C---Chh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-EALNGVKMELVDAAFPLLKGVVA-T---T---DAV   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~l~~~~~dl~~~~~~~~~~~~~-~---~---~~~   76 (332)
                      .++|.|+||+|++|..++..|+..|. .     .|++++++... +.++....++....    .++.. .   +   ...
T Consensus       226 ~~~vLITGgtGgIG~~la~~La~~G~-~-----~vvl~~R~~~~~~~~~~l~~~l~~~g----~~v~~~~~Dv~d~~~v~  295 (486)
T 2fr1_A          226 TGTVLVTGGTGGVGGQIARWLARRGA-P-----HLLLVSRSGPDADGAGELVAELEALG----ARTTVAACDVTDRESVR  295 (486)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTC-S-----EEEEEESSGGGSTTHHHHHHHHHHTT----CEEEEEECCTTCHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-C-----EEEEEcCCCCCcHHHHHHHHHHHhcC----CEEEEEEeCCCCHHHHH
Confidence            46899999999999999999998763 1     48999987421 11222222333211    11111 0   1   123


Q ss_pred             hhcCC------CcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           77 EACTG------VNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        77 ~al~~------aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      ++++.      .|+||++||+....   ..+.+   ..+..|+.....+.+.+.+.. . ..||++|.
T Consensus       296 ~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~-~~~V~~SS  361 (486)
T 2fr1_A          296 ELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-L-TAFVLFSS  361 (486)
T ss_dssp             HHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-C-SEEEEEEE
T ss_pred             HHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-C-CEEEEEcC
Confidence            33444      49999999986432   12333   345678888888888877653 3 45666664

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.73  E-value=0.0076  Score=56.12  Aligned_cols=72  Identities=22%  Similarity=0.375  Sum_probs=44.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ++||+|+||+|.+|..+...|...+. .   ..++.++.-..    -.|....+..      ..+.+.....++++++|+
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~-p---~~el~~~as~~----saG~~~~~~~------~~~~~~~~~~~~~~~~Dv   67 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTL-P---IDKIRYLASAR----SAGKSLKFKD------QDITIEETTETAFEGVDI   67 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCC-C---EEEEEEEECTT----TTTCEEEETT------EEEEEEECCTTTTTTCSE
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCC-C---cEEEEEEEccc----cCCCcceecC------CCceEeeCCHHHhcCCCE
Confidence            46999999999999999998877521 1   12677775432    2222222211      123332222355789999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      ||.+.|
T Consensus        68 vf~a~~   73 (366)
T 3pwk_A           68 ALFSAG   73 (366)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999865

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=96.70  E-value=0.0017  Score=59.47  Aligned_cols=72  Identities=10%  Similarity=0.045  Sum_probs=43.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      |+|+++||+||| +|.+|..++..|...+-      .+ +.++|+++  ++++..+..+     .. .  ..+++..+.+
T Consensus         1 M~m~~~rigiiG-~G~ig~~~~~~l~~~~~------~~~~av~d~~~--~~~~~~a~~~-----~~-~--~~~~~~~~ll   63 (329)
T 3evn_A            1 MSLSKVRYGVVS-TAKVAPRFIEGVRLAGN------GEVVAVSSRTL--ESAQAFANKY-----HL-P--KAYDKLEDML   63 (329)
T ss_dssp             ----CEEEEEEB-CCTTHHHHHHHHHHHCS------EEEEEEECSCS--STTCC---CC-----CC-S--CEESCHHHHH
T ss_pred             CCCCceEEEEEe-chHHHHHHHHHHHhCCC------cEEEEEEcCCH--HHHHHHHHHc-----CC-C--cccCCHHHHh
Confidence            778889999999 69999998888776431      13 45788874  3333221111     00 0  2346777777


Q ss_pred             C--CCcEEEEeC
Q 020022           80 T--GVNIAVMVG   89 (332)
Q Consensus        80 ~--~aDiVi~~a   89 (332)
                      .  ++|+|+++.
T Consensus        64 ~~~~~D~V~i~t   75 (329)
T 3evn_A           64 ADESIDVIYVAT   75 (329)
T ss_dssp             TCTTCCEEEECS
T ss_pred             cCCCCCEEEECC
Confidence            7  799999873

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=96.67  E-value=0.0017  Score=59.51  Aligned_cols=72  Identities=21%  Similarity=0.237  Sum_probs=45.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEE-EEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      |+|+++||+||| +|.+|..++..|...+-      .+++ ++|+++  ++++..+..+   ..+     ..+++..+.+
T Consensus         1 M~m~~~~igiiG-~G~~g~~~~~~l~~~~~------~~l~av~d~~~--~~~~~~~~~~---~~~-----~~~~~~~~ll   63 (330)
T 3e9m_A            1 MSLDKIRYGIMS-TAQIVPRFVAGLRESAQ------AEVRGIASRRL--ENAQKMAKEL---AIP-----VAYGSYEELC   63 (330)
T ss_dssp             --CCCEEEEECS-CCTTHHHHHHHHHHSSS------EEEEEEBCSSS--HHHHHHHHHT---TCC-----CCBSSHHHHH
T ss_pred             CCCCeEEEEEEC-chHHHHHHHHHHHhCCC------cEEEEEEeCCH--HHHHHHHHHc---CCC-----ceeCCHHHHh
Confidence            788889999999 69999999888876421      2444 789874  3333222111   111     2345667777


Q ss_pred             C--CCcEEEEeC
Q 020022           80 T--GVNIAVMVG   89 (332)
Q Consensus        80 ~--~aDiVi~~a   89 (332)
                      .  ++|+|+++.
T Consensus        64 ~~~~~D~V~i~t   75 (330)
T 3e9m_A           64 KDETIDIIYIPT   75 (330)
T ss_dssp             HCTTCSEEEECC
T ss_pred             cCCCCCEEEEcC
Confidence            6  799999873

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=96.67  E-value=0.0022  Score=56.57  Aligned_cols=64  Identities=13%  Similarity=0.118  Sum_probs=43.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.+|+.++..|+..|.       +|.++|+..+++.++    .+...      .+.  ++..+++++||+|
T Consensus         1 M~I~iIG-~G~mG~~la~~l~~~g~-------~V~~~~~~~~~~~~~----~~~~~------g~~--~~~~~~~~~aDvv   60 (264)
T 1i36_A            1 LRVGFIG-FGEVAQTLASRLRSRGV-------EVVTSLEGRSPSTIE----RARTV------GVT--ETSEEDVYSCPVV   60 (264)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTC-------EEEECCTTCCHHHHH----HHHHH------TCE--ECCHHHHHTSSEE
T ss_pred             CeEEEEe-chHHHHHHHHHHHHCCC-------eEEEeCCccCHHHHH----HHHHC------CCc--CCHHHHHhcCCEE
Confidence            4899999 79999999999988763       688888731122222    22221      112  3456778999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        61 i~~v   64 (264)
T 1i36_A           61 ISAV   64 (264)
T ss_dssp             EECS
T ss_pred             EEEC
Confidence            9985

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.64  E-value=0.0038  Score=55.76  Aligned_cols=69  Identities=16%  Similarity=0.177  Sum_probs=48.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+|+| +|.+|.+++..|...+.       +|.++|++.  ++++    .+.+.   .  .+....+..++++++|+
T Consensus       129 ~~~v~iiG-aG~~g~aia~~L~~~g~-------~V~v~~r~~--~~~~----~l~~~---~--g~~~~~~~~~~~~~aDi  189 (275)
T 2hk9_A          129 EKSILVLG-AGGASRAVIYALVKEGA-------KVFLWNRTK--EKAI----KLAQK---F--PLEVVNSPEEVIDKVQV  189 (275)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHHTC-------EEEEECSSH--HHHH----HHTTT---S--CEEECSCGGGTGGGCSE
T ss_pred             CCEEEEEC-chHHHHHHHHHHHHcCC-------EEEEEECCH--HHHH----HHHHH---c--CCeeehhHHhhhcCCCE
Confidence            46999999 69999999999988763       699999873  3332    22211   0  12333466788899999


Q ss_pred             EEEeCCCC
Q 020022           85 AVMVGGFP   92 (332)
Q Consensus        85 Vi~~ag~~   92 (332)
                      ||.+....
T Consensus       190 Vi~atp~~  197 (275)
T 2hk9_A          190 IVNTTSVG  197 (275)
T ss_dssp             EEECSSTT
T ss_pred             EEEeCCCC
Confidence            99986544

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.63  E-value=0.0035  Score=56.51  Aligned_cols=61  Identities=11%  Similarity=0.040  Sum_probs=46.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+||| .|.+|+.++..|...|.       +|..||++..  ....               .....++.+.+++||+
T Consensus       122 g~tvGIIG-lG~IG~~vA~~l~~~G~-------~V~~~dr~~~--~~~~---------------~~~~~~l~ell~~aDi  176 (290)
T 3gvx_A          122 GKALGILG-YGGIGRRVAHLAKAFGM-------RVIAYTRSSV--DQNV---------------DVISESPADLFRQSDF  176 (290)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHHTC-------EEEEECSSCC--CTTC---------------SEECSSHHHHHHHCSE
T ss_pred             cchheeec-cCchhHHHHHHHHhhCc-------EEEEEecccc--cccc---------------ccccCChHHHhhccCe
Confidence            47999999 79999999999987664       8999998742  1111               1123467888999999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |++..-
T Consensus       177 V~l~~P  182 (290)
T 3gvx_A          177 VLIAIP  182 (290)
T ss_dssp             EEECCC
T ss_pred             EEEEee
Confidence            999864

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=96.58  E-value=0.0073  Score=55.96  Aligned_cols=76  Identities=16%  Similarity=0.144  Sum_probs=50.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..++|+||| +|.+|...+..|+...-..     +|.++|+++  ++++..+..+...   ....+....+..+++++||
T Consensus       128 ~~~~v~iIG-aG~~a~~~a~al~~~~~~~-----~V~V~~r~~--~~a~~la~~~~~~---~g~~~~~~~~~~eav~~aD  196 (350)
T 1x7d_A          128 NARKMALIG-NGAQSEFQALAFHKHLGIE-----EIVAYDTDP--LATAKLIANLKEY---SGLTIRRASSVAEAVKGVD  196 (350)
T ss_dssp             TCCEEEEEC-CSTTHHHHHHHHHHHSCCC-----EEEEECSSH--HHHHHHHHHHTTC---TTCEEEECSSHHHHHTTCS
T ss_pred             cCCeEEEEC-CcHHHHHHHHHHHHhCCCc-----EEEEEcCCH--HHHHHHHHHHHhc---cCceEEEeCCHHHHHhcCC
Confidence            357999999 6999999887765421112     799999984  4554444433221   0112445567889999999


Q ss_pred             EEEEeCC
Q 020022           84 IAVMVGG   90 (332)
Q Consensus        84 iVi~~ag   90 (332)
                      +||++-.
T Consensus       197 iVi~aTp  203 (350)
T 1x7d_A          197 IITTVTA  203 (350)
T ss_dssp             EEEECCC
T ss_pred             EEEEecc
Confidence            9998743

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.56  E-value=0.0028  Score=58.35  Aligned_cols=66  Identities=15%  Similarity=0.109  Sum_probs=47.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| .|.+|+.++..|...|.       +|..+|++..  . + ...++  .       +.. .+..+.+++||+
T Consensus       150 g~~vgIIG-~G~iG~~iA~~l~~~G~-------~V~~~d~~~~--~-~-~~~~~--g-------~~~-~~l~~~l~~aDv  207 (334)
T 2dbq_A          150 GKTIGIIG-LGRIGQAIAKRAKGFNM-------RILYYSRTRK--E-E-VEREL--N-------AEF-KPLEDLLRESDF  207 (334)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSCC--H-H-HHHHH--C-------CEE-CCHHHHHHHCSE
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCCC-------EEEEECCCcc--h-h-hHhhc--C-------ccc-CCHHHHHhhCCE
Confidence            47999999 79999999999987653       7999998752  1 1 11111  1       122 367788999999


Q ss_pred             EEEeCCCC
Q 020022           85 AVMVGGFP   92 (332)
Q Consensus        85 Vi~~ag~~   92 (332)
                      |+++...+
T Consensus       208 Vil~vp~~  215 (334)
T 2dbq_A          208 VVLAVPLT  215 (334)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99986543

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=96.54  E-value=0.0087  Score=55.19  Aligned_cols=24  Identities=42%  Similarity=0.717  Sum_probs=21.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARG   28 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~   28 (332)
                      ++||+|+||+|.+|..++..|...
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~   29 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDER   29 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhC
Confidence            479999999999999999988754

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.51  E-value=0.0031  Score=54.06  Aligned_cols=33  Identities=12%  Similarity=0.243  Sum_probs=28.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |||.|+| +|.+|+.++..|...+.       +++++|.++
T Consensus         1 M~iiIiG-~G~~G~~la~~L~~~g~-------~v~vid~~~   33 (218)
T 3l4b_C            1 MKVIIIG-GETTAYYLARSMLSRKY-------GVVIINKDR   33 (218)
T ss_dssp             CCEEEEC-CHHHHHHHHHHHHHTTC-------CEEEEESCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCH
Confidence            5899999 69999999999988763       699999874

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=96.51  E-value=0.018  Score=45.66  Aligned_cols=34  Identities=18%  Similarity=0.252  Sum_probs=29.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..+|.|+| .|.+|+.++..|...|.       +++++|.++
T Consensus         7 ~~~viIiG-~G~~G~~la~~L~~~g~-------~v~vid~~~   40 (140)
T 3fwz_A            7 CNHALLVG-YGRVGSLLGEKLLASDI-------PLVVIETSR   40 (140)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTC-------CEEEEESCH
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHCCC-------CEEEEECCH
Confidence            36899999 69999999999998764       799999984

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.49  E-value=0.0015  Score=62.81  Aligned_cols=74  Identities=7%  Similarity=0.079  Sum_probs=46.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~~al   79 (332)
                      ++++|+|+| +|++|++++..|+..+.       +++++|++.  ++++..+..+..     ...+... +   +..+++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~-------~V~v~~R~~--~~a~~la~~~~~-----~~~~~~Dv~d~~~l~~~l   66 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGI-------KVTVACRTL--ESAKKLSAGVQH-----STPISLDVNDDAALDAEV   66 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTC-------EEEEEESSH--HHHHHTTTTCTT-----EEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcC-------EEEEEECCH--HHHHHHHHhcCC-----ceEEEeecCCHHHHHHHH
Confidence            346899999 79999999999987652       799999873  333221111110     0011111 1   234677


Q ss_pred             CCCcEEEEeCCCC
Q 020022           80 TGVNIAVMVGGFP   92 (332)
Q Consensus        80 ~~aDiVi~~ag~~   92 (332)
                      +++|+||++++..
T Consensus        67 ~~~DvVIn~a~~~   79 (450)
T 1ff9_A           67 AKHDLVISLIPYT   79 (450)
T ss_dssp             TTSSEEEECCC--
T ss_pred             cCCcEEEECCccc
Confidence            8999999998754

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.47  E-value=0.0015  Score=61.84  Aligned_cols=78  Identities=12%  Similarity=0.121  Sum_probs=48.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccC-CCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe----eCChhhhcC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVML-GTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA----TTDAVEACT   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~-~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~----~~~~~~al~   80 (332)
                      +||+|+|| |.+|+.++..|+..+-. .     ++.++|++.  ++++..+..+..........+..    ..+..+.++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~-----~V~v~~r~~--~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~   73 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFS-----HITLASRTL--SKCQEIAQSIKAKGYGEIDITTVDADSIEELVALIN   73 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCC-----EEEEEESCH--HHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCce-----EEEEEECCH--HHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHH
Confidence            58999995 99999999999886521 2     799999984  55554444443211000011111    122445566


Q ss_pred             C--CcEEEEeCCC
Q 020022           81 G--VNIAVMVGGF   91 (332)
Q Consensus        81 ~--aDiVi~~ag~   91 (332)
                      +  +|+||+++|.
T Consensus        74 ~~~~DvVin~ag~   86 (405)
T 4ina_A           74 EVKPQIVLNIALP   86 (405)
T ss_dssp             HHCCSEEEECSCG
T ss_pred             hhCCCEEEECCCc
Confidence            6  8999999873

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=96.44  E-value=0.012  Score=53.41  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=29.3

Q ss_pred             CCcEEEEEcC--CCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            4 EPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         4 ~~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      +.+++.|+||  +|.+|.+++..|+..|.       +|++.|++
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~-------~Vv~~~r~   44 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGA-------RVALGTWP   44 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTC-------EEEEEECH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCC-------EEEEEecc
Confidence            3468999998  79999999999998874       78898864

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.44  E-value=0.0044  Score=57.36  Aligned_cols=66  Identities=17%  Similarity=0.100  Sum_probs=46.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHH-hcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIA-RGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .++|+||| .|.||+.++..+. ..|.       +|..+|++..  ..+ ...++         .+....+..+.+++||
T Consensus       163 g~~vgIIG-~G~IG~~vA~~l~~~~G~-------~V~~~d~~~~--~~~-~~~~~---------g~~~~~~l~ell~~aD  222 (348)
T 2w2k_A          163 GHVLGAVG-LGAIQKEIARKAVHGLGM-------KLVYYDVAPA--DAE-TEKAL---------GAERVDSLEELARRSD  222 (348)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCC-------EEEEECSSCC--CHH-HHHHH---------TCEECSSHHHHHHHCS
T ss_pred             CCEEEEEE-ECHHHHHHHHHHHHhcCC-------EEEEECCCCc--chh-hHhhc---------CcEEeCCHHHHhccCC
Confidence            47999999 7999999999998 6653       7999998742  111 11111         1122346778889999


Q ss_pred             EEEEeCC
Q 020022           84 IAVMVGG   90 (332)
Q Consensus        84 iVi~~ag   90 (332)
                      +|+++.-
T Consensus       223 vVil~vp  229 (348)
T 2w2k_A          223 CVSVSVP  229 (348)
T ss_dssp             EEEECCC
T ss_pred             EEEEeCC
Confidence            9999864

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=96.44  E-value=0.0066  Score=56.08  Aligned_cols=70  Identities=16%  Similarity=0.300  Sum_probs=45.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC-
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-   80 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~-   80 (332)
                      ++++||+||| +|.+|...+..|....   +  ..+ +.++|+++  ++++..+..+         .+..+++..+.++ 
T Consensus        11 ~~~~rvgiiG-~G~~g~~~~~~l~~~~---~--~~~lvav~d~~~--~~~~~~~~~~---------~~~~~~~~~~ll~~   73 (354)
T 3q2i_A           11 DRKIRFALVG-CGRIANNHFGALEKHA---D--RAELIDVCDIDP--AALKAAVERT---------GARGHASLTDMLAQ   73 (354)
T ss_dssp             SSCEEEEEEC-CSTTHHHHHHHHHHTT---T--TEEEEEEECSSH--HHHHHHHHHH---------CCEEESCHHHHHHH
T ss_pred             CCcceEEEEc-CcHHHHHHHHHHHhCC---C--CeEEEEEEcCCH--HHHHHHHHHc---------CCceeCCHHHHhcC
Confidence            3568999999 6999999888887641   0  125 45889874  4433222111         1245567777775 


Q ss_pred             -CCcEEEEeC
Q 020022           81 -GVNIAVMVG   89 (332)
Q Consensus        81 -~aDiVi~~a   89 (332)
                       ++|+|+++.
T Consensus        74 ~~~D~V~i~t   83 (354)
T 3q2i_A           74 TDADIVILTT   83 (354)
T ss_dssp             CCCSEEEECS
T ss_pred             CCCCEEEECC
Confidence             899999973

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.42  E-value=0.0056  Score=56.22  Aligned_cols=66  Identities=12%  Similarity=0.065  Sum_probs=46.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| .|.+|+.++..|...|.       +|..+|++.  +..+.    ....      .+... +..+.+++||+
T Consensus       155 g~~vgIIG-~G~iG~~iA~~l~~~G~-------~V~~~d~~~--~~~~~----~~~~------g~~~~-~l~e~l~~aDv  213 (330)
T 2gcg_A          155 QSTVGIIG-LGRIGQAIARRLKPFGV-------QRFLYTGRQ--PRPEE----AAEF------QAEFV-STPELAAQSDF  213 (330)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHGGGTC-------CEEEEESSS--CCHHH----HHTT------TCEEC-CHHHHHHHCSE
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCCC--cchhH----HHhc------CceeC-CHHHHHhhCCE
Confidence            47999999 79999999999987653       689999874  21211    1111      12223 67788899999


Q ss_pred             EEEeCCC
Q 020022           85 AVMVGGF   91 (332)
Q Consensus        85 Vi~~ag~   91 (332)
                      |+++...
T Consensus       214 Vi~~vp~  220 (330)
T 2gcg_A          214 IVVACSL  220 (330)
T ss_dssp             EEECCCC
T ss_pred             EEEeCCC
Confidence            9998654

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=96.40  E-value=0.014  Score=54.21  Aligned_cols=76  Identities=16%  Similarity=0.135  Sum_probs=42.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-----hcC-CccceEeeCChhhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-----AFP-LLKGVVATTDAVEA   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-----~~~-~~~~~~~~~~~~~a   78 (332)
                      ++||+|+||+|.+|..+...|...+.      .|+.++.-..    -.|....-..-     ..+ ......+.....+.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~------~el~~l~S~~----saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~   76 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPY------IKPAYLAGKG----SVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL   76 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSS------EEEEEEEEST----TTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC------ceEEEEECch----hcCCChhHhcccccccccccccccceEEeCCHHH
Confidence            47999999999999999997765432      2677664321    12222111000     000 00122222223356


Q ss_pred             cCCCcEEEEeCC
Q 020022           79 CTGVNIAVMVGG   90 (332)
Q Consensus        79 l~~aDiVi~~ag   90 (332)
                      +.++|+||.+.+
T Consensus        77 ~~~vDvvf~a~p   88 (359)
T 4dpk_A           77 MDDVDIIFSPLP   88 (359)
T ss_dssp             CTTCCEEEECCC
T ss_pred             hcCCCEEEECCC
Confidence            789999999865

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=96.40  E-value=0.014  Score=54.21  Aligned_cols=76  Identities=16%  Similarity=0.135  Sum_probs=42.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-----hcC-CccceEeeCChhhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-----AFP-LLKGVVATTDAVEA   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-----~~~-~~~~~~~~~~~~~a   78 (332)
                      ++||+|+||+|.+|..+...|...+.      .|+.++.-..    -.|....-..-     ..+ ......+.....+.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~------~el~~l~S~~----saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~   76 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPY------IKPAYLAGKG----SVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL   76 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSS------EEEEEEEEST----TTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC------ceEEEEECch----hcCCChhHhcccccccccccccccceEEeCCHHH
Confidence            47999999999999999997765432      2677664321    12222111000     000 00122222223356


Q ss_pred             cCCCcEEEEeCC
Q 020022           79 CTGVNIAVMVGG   90 (332)
Q Consensus        79 l~~aDiVi~~ag   90 (332)
                      +.++|+||.+.+
T Consensus        77 ~~~vDvvf~a~p   88 (359)
T 4dpl_A           77 MDDVDIIFSPLP   88 (359)
T ss_dssp             CTTCCEEEECCC
T ss_pred             hcCCCEEEECCC
Confidence            789999999865

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.34  E-value=0.016  Score=57.67  Aligned_cols=120  Identities=20%  Similarity=0.212  Sum_probs=68.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC-------chhhhhhhHHHHhhhhcCCccceEeeCC---
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-------AAEALNGVKMELVDAAFPLLKGVVATTD---   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-------~~~~l~~~~~dl~~~~~~~~~~~~~~~~---   74 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|++.|++.       +.+.++....++..........+....+   
T Consensus         8 gkvalVTGas~GIG~a~A~~la~~Ga-------~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~   80 (604)
T 2et6_A            8 DKVVIITGAGGGLGKYYSLEFAKLGA-------KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDK   80 (604)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCC-------EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHH
Confidence            45788999999999999999999874       788988753       0122332233332211000000000011   


Q ss_pred             ----hhhhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           75 ----AVEACTGVNIAVMVGGFPRKE---GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        75 ----~~~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                          ..+.+-..|++|..||+.+..   ..+.+   ..+..|+    ...+...+.+++..  .+.||++|..
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~--~G~IVnisS~  151 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK--YGRIVNTSSP  151 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CCEEEEECCH
Confidence                122345689999999985421   23333   3455555    45666677776653  3678888754

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=96.33  E-value=0.0083  Score=54.46  Aligned_cols=35  Identities=14%  Similarity=0.251  Sum_probs=29.1

Q ss_pred             CCcEEEEEcC--CCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            4 EPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         4 ~~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ..+++.|+||  +|.+|.+++..|+..|.       .|++.|++
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~-------~Vv~~~r~   44 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGA-------RVLVGTWP   44 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTC-------EEEEEECH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-------EEEEEecc
Confidence            3468999998  79999999999999874       68888854

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.31  E-value=0.017  Score=50.69  Aligned_cols=34  Identities=35%  Similarity=0.560  Sum_probs=30.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .||+|+| +|.+|+.++..|+..|+ +     +|.++|.+.
T Consensus        32 ~~VlVvG-~Gg~G~~va~~La~~Gv-~-----~i~lvD~d~   65 (249)
T 1jw9_B           32 SRVLIVG-LGGLGCAASQYLASAGV-G-----NLTLLDFDT   65 (249)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTC-S-----EEEEECCCB
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHcCC-C-----eEEEEcCCC
Confidence            6899999 69999999999998875 4     799999874

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.31  E-value=0.01  Score=55.59  Aligned_cols=26  Identities=19%  Similarity=0.386  Sum_probs=22.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGV   29 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~   29 (332)
                      +++||+|+||+|.+|..+...|...+
T Consensus        18 ~~~kVaIvGAtG~vG~ell~lL~~hp   43 (381)
T 3hsk_A           18 SVKKAGVLGATGSVGQRFILLLSKHP   43 (381)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCS
T ss_pred             CccEEEEECCCChHHHHHHHHHHcCC
Confidence            55799999999999999999887643

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.31  E-value=0.004  Score=57.92  Aligned_cols=76  Identities=17%  Similarity=0.198  Sum_probs=42.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~~~~~al~~   81 (332)
                      +++||+|+||+|.+|..++..|...+.      ++++.+....+    .+...+-.+..+...  ..+... + .+.+++
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p~------~elvai~~~~~----~g~~~~~~~~~~~~~v~~dl~~~-~-~~~~~~   82 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHPH------FQVTLMTADRK----AGQSMESVFPHLRAQKLPTLVSV-K-DADFST   82 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCSS------EEEEEEBCSTT----TTSCHHHHCGGGTTSCCCCCBCG-G-GCCGGG
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCCC------cEEEEEeCchh----cCCCHHHhCchhcCcccccceec-c-hhHhcC
Confidence            347999999999999999999886532      25555533221    112222112111100  112221 1 344578


Q ss_pred             CcEEEEeCCC
Q 020022           82 VNIAVMVGGF   91 (332)
Q Consensus        82 aDiVi~~ag~   91 (332)
                      +|+||++.|.
T Consensus        83 vDvVf~atp~   92 (359)
T 1xyg_A           83 VDAVFCCLPH   92 (359)
T ss_dssp             CSEEEECCCT
T ss_pred             CCEEEEcCCc
Confidence            9999998753

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=96.30  E-value=0.014  Score=53.32  Aligned_cols=73  Identities=16%  Similarity=0.139  Sum_probs=50.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..++|+||| +|.+|...+..|+...-+.     ++.++|+++  ++++..+.++....    ..+. ..+..+++ ++|
T Consensus       124 ~~~~v~iIG-aG~~a~~~~~al~~~~~~~-----~V~v~~r~~--~~a~~la~~~~~~~----~~~~-~~~~~e~v-~aD  189 (322)
T 1omo_A          124 NSSVFGFIG-CGTQAYFQLEALRRVFDIG-----EVKAYDVRE--KAAKKFVSYCEDRG----ISAS-VQPAEEAS-RCD  189 (322)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHHSCCC-----EEEEECSSH--HHHHHHHHHHHHTT----CCEE-ECCHHHHT-SSS
T ss_pred             CCCEEEEEc-CcHHHHHHHHHHHHhCCcc-----EEEEECCCH--HHHHHHHHHHHhcC----ceEE-ECCHHHHh-CCC
Confidence            357999999 6999999988887632122     799999984  55554444443210    1334 56778889 999


Q ss_pred             EEEEeCC
Q 020022           84 IAVMVGG   90 (332)
Q Consensus        84 iVi~~ag   90 (332)
                      +||++-.
T Consensus       190 vVi~aTp  196 (322)
T 1omo_A          190 VLVTTTP  196 (322)
T ss_dssp             EEEECCC
T ss_pred             EEEEeeC
Confidence            9998743

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.29  E-value=0.012  Score=54.53  Aligned_cols=67  Identities=19%  Similarity=0.102  Sum_probs=47.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+||| .|.||+.++..|...|+       +|..+|+++.  ..+ ...++  .       +....++.+.+++||+
T Consensus       164 gktvGIIG-~G~IG~~vA~~l~~~G~-------~V~~~dr~~~--~~~-~~~~~--g-------~~~~~~l~ell~~aDv  223 (351)
T 3jtm_A          164 GKTIGTVG-AGRIGKLLLQRLKPFGC-------NLLYHDRLQM--APE-LEKET--G-------AKFVEDLNEMLPKCDV  223 (351)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHGGGCC-------EEEEECSSCC--CHH-HHHHH--C-------CEECSCHHHHGGGCSE
T ss_pred             CCEEeEEE-eCHHHHHHHHHHHHCCC-------EEEEeCCCcc--CHH-HHHhC--C-------CeEcCCHHHHHhcCCE
Confidence            47999999 79999999999987654       7999998641  111 11111  1       1223468889999999


Q ss_pred             EEEeCCC
Q 020022           85 AVMVGGF   91 (332)
Q Consensus        85 Vi~~ag~   91 (332)
                      |++..-.
T Consensus       224 V~l~~Pl  230 (351)
T 3jtm_A          224 IVINMPL  230 (351)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9998643

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.28  E-value=0.0072  Score=58.90  Aligned_cols=117  Identities=16%  Similarity=0.101  Sum_probs=68.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch-hhhhhhHHHHhhhhcCCccceEee----CC---hh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-EALNGVKMELVDAAFPLLKGVVAT----TD---AV   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~l~~~~~dl~~~~~~~~~~~~~~----~~---~~   76 (332)
                      .++|.|+||+|++|..++..|+..|. .     .++|.+++... +.+.....++....    .++...    ++   ..
T Consensus       259 ~~~vLITGgtGgIG~~lA~~La~~G~-~-----~vvl~~R~~~~~~~~~~l~~~l~~~g----~~v~~~~~Dvtd~~~v~  328 (511)
T 2z5l_A          259 SGTVLITGGMGAIGRRLARRLAAEGA-E-----RLVLTSRRGPEAPGAAELAEELRGHG----CEVVHAACDVAERDALA  328 (511)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC-S-----EEEEEESSGGGSTTHHHHHHHHHTTT----CEEEEEECCSSCHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-c-----EEEEEecCCcccHHHHHHHHHHHhcC----CEEEEEEeCCCCHHHHH
Confidence            46899999999999999999988763 1     58899887421 11222222332211    112111    11   23


Q ss_pred             hhcC--CCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           77 EACT--GVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        77 ~al~--~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +.++  ..|+||++||+....   ..+.   ...+..|+.....+.+.+.... +...||++|.
T Consensus       329 ~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~~V~~SS  391 (511)
T 2z5l_A          329 ALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK-GLDAFVLFSS  391 (511)
T ss_dssp             HHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT-TCCCEEEEEE
T ss_pred             HHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEeC
Confidence            3343  389999999986432   1232   2345678777777777665441 2235666664

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.19  E-value=0.017  Score=54.75  Aligned_cols=91  Identities=10%  Similarity=0.027  Sum_probs=59.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|..++..|...|.       +|..+|+++  .+.. .+.  .+.       +.. .++.+++++||+
T Consensus       211 GktVgIiG-~G~IG~~vA~~Lka~Ga-------~Viv~D~~p--~~a~-~A~--~~G-------~~~-~sL~eal~~ADV  269 (436)
T 3h9u_A          211 GKTACVCG-YGDVGKGCAAALRGFGA-------RVVVTEVDP--INAL-QAA--MEG-------YQV-LLVEDVVEEAHI  269 (436)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHH-HHH--HTT-------CEE-CCHHHHTTTCSE
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHHCCC-------EEEEECCCh--hhhH-HHH--HhC-------Cee-cCHHHHHhhCCE
Confidence            47999999 79999999999987664       799999874  2211 111  111       111 368899999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA  134 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~  134 (332)
                      |+.+.+...--+.                 +.+... +++++|++++++.
T Consensus       270 Vilt~gt~~iI~~-----------------e~l~~M-K~gAIVINvgRg~  301 (436)
T 3h9u_A          270 FVTTTGNDDIITS-----------------EHFPRM-RDDAIVCNIGHFD  301 (436)
T ss_dssp             EEECSSCSCSBCT-----------------TTGGGC-CTTEEEEECSSSG
T ss_pred             EEECCCCcCccCH-----------------HHHhhc-CCCcEEEEeCCCC
Confidence            9987553321111                 112333 4789999998763

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.18  E-value=0.015  Score=54.28  Aligned_cols=78  Identities=22%  Similarity=0.224  Sum_probs=49.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-------cce-------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-------KGV-------   69 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-------~~~-------   69 (332)
                      ++.||+|+| +|.+|...+..+...|.       +|..+|+++  ++++ ...++. ..+...       ...       
T Consensus       183 ~~~kV~ViG-~G~iG~~aa~~a~~lGa-------~V~v~D~~~--~~l~-~~~~lG-a~~~~l~~~~~~~~gya~~~~~~  250 (381)
T 3p2y_A          183 KPASALVLG-VGVAGLQALATAKRLGA-------KTTGYDVRP--EVAE-QVRSVG-AQWLDLGIDAAGEGGYARELSEA  250 (381)
T ss_dssp             CCCEEEEES-CSHHHHHHHHHHHHHTC-------EEEEECSSG--GGHH-HHHHTT-CEECCCC-------------CHH
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHH-HHHHcC-CeEEeccccccccccchhhhhHH
Confidence            357999999 69999999998887663       799999985  3332 112221 000000       000       


Q ss_pred             ---EeeCChhhhcCCCcEEEEeCCCCC
Q 020022           70 ---VATTDAVEACTGVNIAVMVGGFPR   93 (332)
Q Consensus        70 ---~~~~~~~~al~~aDiVi~~ag~~~   93 (332)
                         ....++.+++++||+||.++..|.
T Consensus       251 ~~~~~~~~l~e~l~~aDIVI~tv~iPg  277 (381)
T 3p2y_A          251 ERAQQQQALEDAITKFDIVITTALVPG  277 (381)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHhhhHHHHHHHHhcCCEEEECCCCCC
Confidence               001245688999999999877664

>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}

Probab=96.17  E-value=0.0038  Score=57.95  Aligned_cols=72  Identities=17%  Similarity=0.188  Sum_probs=44.4

Q ss_pred             CCCCCcEEEEEcCCCchHHH-HHHHHHhcccCCCCCceEE-EEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYA-LVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~-la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      |+|+++||+||| +|.+|.. ++..|...+      ..++ .++|+++  ++++..+..+        .....+++..+.
T Consensus         1 M~M~~~rigiIG-~G~~g~~~~~~~l~~~~------~~~l~av~d~~~--~~~~~~a~~~--------~~~~~~~~~~~l   63 (359)
T 3m2t_A            1 MSLSLIKVGLVG-IGAQMQENLLPSLLQMQ------DIRIVAACDSDL--ERARRVHRFI--------SDIPVLDNVPAM   63 (359)
T ss_dssp             --CCCEEEEEEC-CSHHHHHTHHHHHHTCT------TEEEEEEECSSH--HHHGGGGGTS--------CSCCEESSHHHH
T ss_pred             CCCCcceEEEEC-CCHHHHHHHHHHHHhCC------CcEEEEEEcCCH--HHHHHHHHhc--------CCCcccCCHHHH
Confidence            778889999999 7999984 777776542      1255 4889874  3333221111        112345667776


Q ss_pred             cC--CCcEEEEeC
Q 020022           79 CT--GVNIAVMVG   89 (332)
Q Consensus        79 l~--~aDiVi~~a   89 (332)
                      ++  +.|+|+++.
T Consensus        64 l~~~~vD~V~i~t   76 (359)
T 3m2t_A           64 LNQVPLDAVVMAG   76 (359)
T ss_dssp             HHHSCCSEEEECS
T ss_pred             hcCCCCCEEEEcC
Confidence            65  569999873

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6

Probab=96.14  E-value=0.0014  Score=58.49  Aligned_cols=64  Identities=6%  Similarity=0.087  Sum_probs=36.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEE-EEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +|||+||| +|.+|+.++..|... .       ++ .++|+++  +.++.    +... ..    . .+++..++++++|
T Consensus         2 ~m~I~iIG-~G~mG~~la~~l~~~-~-------~v~~v~~~~~--~~~~~----~~~~-~g----~-~~~~~~~~~~~~D   60 (276)
T 2i76_A            2 SLVLNFVG-TGTLTRFFLECLKDR-Y-------EIGYILSRSI--DRARN----LAEV-YG----G-KAATLEKHPELNG   60 (276)
T ss_dssp             --CCEEES-CCHHHHHHHHTTC------------CCCEECSSH--HHHHH----HHHH-TC----C-CCCSSCCCCC---
T ss_pred             CceEEEEe-CCHHHHHHHHHHHHc-C-------cEEEEEeCCH--HHHHH----HHHH-cC----C-ccCCHHHHHhcCC
Confidence            36899999 699999999887654 2       56 5899874  33321    2111 01    1 2345566788999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +||++.
T Consensus        61 vVilav   66 (276)
T 2i76_A           61 VVFVIV   66 (276)
T ss_dssp             CEEECS
T ss_pred             EEEEeC
Confidence            999984

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=96.09  E-value=0.011  Score=54.60  Aligned_cols=64  Identities=14%  Similarity=0.134  Sum_probs=46.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+||| .|.||+.++..|..-|+       +|..+|+...  ...     ....       .....++.+.+++||+
T Consensus       173 gktvGIIG-lG~IG~~vA~~l~~~G~-------~V~~~dr~~~--~~~-----~~~g-------~~~~~~l~ell~~sDv  230 (345)
T 4g2n_A          173 GRRLGIFG-MGRIGRAIATRARGFGL-------AIHYHNRTRL--SHA-----LEEG-------AIYHDTLDSLLGASDI  230 (345)
T ss_dssp             TCEEEEES-CSHHHHHHHHHHHTTTC-------EEEEECSSCC--CHH-----HHTT-------CEECSSHHHHHHTCSE
T ss_pred             CCEEEEEE-eChhHHHHHHHHHHCCC-------EEEEECCCCc--chh-----hhcC-------CeEeCCHHHHHhhCCE
Confidence            37999999 79999999999987653       7999998741  111     1111       1223468888999999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |++..-
T Consensus       231 V~l~~P  236 (345)
T 4g2n_A          231 FLIAAP  236 (345)
T ss_dssp             EEECSC
T ss_pred             EEEecC
Confidence            999854

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=96.06  E-value=0.01  Score=54.80  Aligned_cols=70  Identities=13%  Similarity=0.144  Sum_probs=43.0

Q ss_pred             CCCCCcEEEEEcCCCchHH-HHHHHHHhcccCCCCCceEE-EEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            1 MAKEPVRVLVTGAAGQIGY-ALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~-~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      |+|+++||+||| +|.+|. .++..|...+      ..++ .++|+++  ++++..+..+         .+...++..+.
T Consensus        23 ~~m~~~rigiIG-~G~~g~~~~~~~l~~~~------~~~l~av~d~~~--~~~~~~a~~~---------g~~~~~~~~~l   84 (350)
T 3rc1_A           23 ANANPIRVGVIG-CADIAWRRALPALEAEP------LTEVTAIASRRW--DRAKRFTERF---------GGEPVEGYPAL   84 (350)
T ss_dssp             ---CCEEEEEES-CCHHHHHTHHHHHHHCT------TEEEEEEEESSH--HHHHHHHHHH---------CSEEEESHHHH
T ss_pred             CCCCceEEEEEc-CcHHHHHHHHHHHHhCC------CeEEEEEEcCCH--HHHHHHHHHc---------CCCCcCCHHHH
Confidence            345678999999 799998 6777777642      1244 5889873  3333222111         11223567777


Q ss_pred             cC--CCcEEEEe
Q 020022           79 CT--GVNIAVMV   88 (332)
Q Consensus        79 l~--~aDiVi~~   88 (332)
                      ++  ++|+|+++
T Consensus        85 l~~~~~D~V~i~   96 (350)
T 3rc1_A           85 LERDDVDAVYVP   96 (350)
T ss_dssp             HTCTTCSEEEEC
T ss_pred             hcCCCCCEEEEC
Confidence            76  58999997

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.06  E-value=0.075  Score=42.16  Aligned_cols=62  Identities=18%  Similarity=0.289  Sum_probs=40.3

Q ss_pred             CCcEEEEEcCC---CchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            4 EPVRVLVTGAA---GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         4 ~~~kI~IiGa~---G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      .+.+|+|||++   |.+|..++..|+..|.       +  ++++++..+..        .       ......+..+..+
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~-------~--V~~vnp~~~~i--------~-------G~~~~~s~~el~~   68 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGF-------E--VLPVNPNYDEI--------E-------GLKCYRSVRELPK   68 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTC-------E--EEEECTTCSEE--------T-------TEECBSSGGGSCT
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCC-------E--EEEeCCCCCeE--------C-------CeeecCCHHHhCC
Confidence            46799999943   9999999999987653       5  56655421111        1       1223345556556


Q ss_pred             CCcEEEEeC
Q 020022           81 GVNIAVMVG   89 (332)
Q Consensus        81 ~aDiVi~~a   89 (332)
                      .+|+++++.
T Consensus        69 ~vDlvii~v   77 (138)
T 1y81_A           69 DVDVIVFVV   77 (138)
T ss_dssp             TCCEEEECS
T ss_pred             CCCEEEEEe
Confidence            899999983

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.05  E-value=0.03  Score=48.37  Aligned_cols=71  Identities=15%  Similarity=0.088  Sum_probs=45.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..++|.|+| +|.+|...+..|+..|.       +|++++.+.. +.+    .++.+..   .-.+....-..+.+.++|
T Consensus        30 ~gk~VLVVG-gG~va~~ka~~Ll~~GA-------~VtVvap~~~-~~l----~~l~~~~---~i~~i~~~~~~~dL~~ad   93 (223)
T 3dfz_A           30 KGRSVLVVG-GGTIATRRIKGFLQEGA-------AITVVAPTVS-AEI----NEWEAKG---QLRVKRKKVGEEDLLNVF   93 (223)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHGGGCC-------CEEEECSSCC-HHH----HHHHHTT---SCEEECSCCCGGGSSSCS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEECCCCC-HHH----HHHHHcC---CcEEEECCCCHhHhCCCC
Confidence            347999999 69999999999988763       6899987532 111    2222211   001111122346789999


Q ss_pred             EEEEeCC
Q 020022           84 IAVMVGG   90 (332)
Q Consensus        84 iVi~~ag   90 (332)
                      +||.+-+
T Consensus        94 LVIaAT~  100 (223)
T 3dfz_A           94 FIVVATN  100 (223)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9998744

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=96.04  E-value=0.011  Score=54.26  Aligned_cols=70  Identities=23%  Similarity=0.209  Sum_probs=45.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEE-EEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      |+ +++||+||| +|.+|..++..|...+-      .+++ ++|+++  ++++..+..+         ....+++..+.+
T Consensus         1 M~-~~~rvgiiG-~G~~g~~~~~~l~~~~~------~~l~av~d~~~--~~~~~~a~~~---------g~~~~~~~~~~l   61 (344)
T 3euw_A            1 MS-LTLRIALFG-AGRIGHVHAANIAANPD------LELVVIADPFI--EGAQRLAEAN---------GAEAVASPDEVF   61 (344)
T ss_dssp             ---CCEEEEEEC-CSHHHHHHHHHHHHCTT------EEEEEEECSSH--HHHHHHHHTT---------TCEEESSHHHHT
T ss_pred             CC-CceEEEEEC-CcHHHHHHHHHHHhCCC------cEEEEEECCCH--HHHHHHHHHc---------CCceeCCHHHHh
Confidence            53 457999999 69999999888876421      2544 889874  3333221111         134556788888


Q ss_pred             C--CCcEEEEeC
Q 020022           80 T--GVNIAVMVG   89 (332)
Q Consensus        80 ~--~aDiVi~~a   89 (332)
                      +  ++|+|+++.
T Consensus        62 ~~~~~D~V~i~t   73 (344)
T 3euw_A           62 ARDDIDGIVIGS   73 (344)
T ss_dssp             TCSCCCEEEECS
T ss_pred             cCCCCCEEEEeC
Confidence            7  899999984

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.03  E-value=0.0077  Score=55.83  Aligned_cols=70  Identities=14%  Similarity=0.218  Sum_probs=44.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEE-EEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      |+|+++||+||| +|.+|...+..|...+      ..++ .++|+++  ++++ .+   ...      .+..+++..+.+
T Consensus         1 M~m~~~~vgiiG-~G~~g~~~~~~l~~~~------~~~l~av~d~~~--~~~~-~a---~~~------g~~~~~~~~~ll   61 (359)
T 3e18_A            1 MSLKKYQLVIVG-YGGMGSYHVTLASAAD------NLEVHGVFDILA--EKRE-AA---AQK------GLKIYESYEAVL   61 (359)
T ss_dssp             --CCCEEEEEEC-CSHHHHHHHHHHHTST------TEEEEEEECSSH--HHHH-HH---HTT------TCCBCSCHHHHH
T ss_pred             CCCCcCcEEEEC-cCHHHHHHHHHHHhCC------CcEEEEEEcCCH--HHHH-HH---Hhc------CCceeCCHHHHh
Confidence            778889999999 7999998888776542      1244 5778874  3332 11   111      122446677777


Q ss_pred             C--CCcEEEEeC
Q 020022           80 T--GVNIAVMVG   89 (332)
Q Consensus        80 ~--~aDiVi~~a   89 (332)
                      +  ++|+|+++.
T Consensus        62 ~~~~~D~V~i~t   73 (359)
T 3e18_A           62 ADEKVDAVLIAT   73 (359)
T ss_dssp             HCTTCCEEEECS
T ss_pred             cCCCCCEEEEcC
Confidence            6  789999874

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=96.02  E-value=0.031  Score=51.48  Aligned_cols=71  Identities=15%  Similarity=0.334  Sum_probs=44.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+|+||+|.+|..+...|...+ |.   ..+++++.-..    -.|....+..      ....+.....+.++++|+|
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~-fp---~~el~~~~s~~----~aG~~~~~~~------~~~~~~~~~~~~~~~~Dvv   67 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERD-FP---ASAVRFFASAR----SQGRKLAFRG------QEIEVEDAETADPSGLDIA   67 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTT-CC---EEEEEEEECTT----TSSCEEEETT------EEEEEEETTTSCCTTCSEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCC-CC---ceEEEEEECcc----cCCCceeecC------CceEEEeCCHHHhccCCEE
Confidence            689999999999999999887753 11   12677775332    2232222211      1233332223567899999


Q ss_pred             EEeCC
Q 020022           86 VMVGG   90 (332)
Q Consensus        86 i~~ag   90 (332)
                      |.+.|
T Consensus        68 f~a~~   72 (344)
T 3tz6_A           68 LFSAG   72 (344)
T ss_dssp             EECSC
T ss_pred             EECCC
Confidence            99865

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.01  E-value=0.0078  Score=55.75  Aligned_cols=35  Identities=23%  Similarity=0.411  Sum_probs=26.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML   42 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~   42 (332)
                      -++++||+|+||+|.+|..++..|...+      .++++.+
T Consensus         1 m~~~~kV~IiGAtG~iG~~llr~L~~~p------~~elvai   35 (350)
T 2ep5_A            1 MADKIKVSLLGSTGMVGQKMVKMLAKHP------YLELVKV   35 (350)
T ss_dssp             -CCCEEEEEESCSSHHHHHHHHHHTTCS------SEEEEEE
T ss_pred             CCCCcEEEEECcCCHHHHHHHHHHHhCC------CcEEEEE
Confidence            0345799999999999999999876542      2366665

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=95.97  E-value=0.016  Score=52.72  Aligned_cols=73  Identities=12%  Similarity=0.052  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..++|+||| +|.+|...+..|....-+.     +|.++|++    +.+..+.++.+..   ...+... +..+++++||
T Consensus       120 ~~~~v~iIG-aG~~a~~~~~al~~~~~~~-----~V~v~~r~----~a~~la~~l~~~~---g~~~~~~-~~~eav~~aD  185 (313)
T 3hdj_A          120 RSSVLGLFG-AGTQGAEHAAQLSARFALE-----AILVHDPY----ASPEILERIGRRC---GVPARMA-APADIAAQAD  185 (313)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHHSCCC-----EEEEECTT----CCHHHHHHHHHHH---TSCEEEC-CHHHHHHHCS
T ss_pred             CCcEEEEEC-ccHHHHHHHHHHHHhCCCc-----EEEEECCc----HHHHHHHHHHHhc---CCeEEEe-CHHHHHhhCC
Confidence            357999999 7999999888877632122     89999987    2333333443211   1133444 7889999999


Q ss_pred             EEEEeCC
Q 020022           84 IAVMVGG   90 (332)
Q Consensus        84 iVi~~ag   90 (332)
                      +||.+-.
T Consensus       186 IVi~aT~  192 (313)
T 3hdj_A          186 IVVTATR  192 (313)
T ss_dssp             EEEECCC
T ss_pred             EEEEccC
Confidence            9998744

>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5

Probab=95.96  E-value=0.012  Score=53.52  Aligned_cols=71  Identities=14%  Similarity=0.170  Sum_probs=40.5

Q ss_pred             CCCCCcEEEEEcCCCchHHH-HHHHHHhcccCCCCCceEEE-EEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYA-LVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~-la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      |+|+++||+||| +|.+|.. ++..|....      ..+++ ++|+++  ++++..+..+   ..+      .+++..+.
T Consensus         1 m~m~~~~vgiiG-~G~~g~~~~~~~l~~~~------~~~lvav~d~~~--~~~~~~~~~~---g~~------~~~~~~~l   62 (319)
T 1tlt_A            1 MSLKKLRIGVVG-LGGIAQKAWLPVLAAAS------DWTLQGAWSPTR--AKALPICESW---RIP------YADSLSSL   62 (319)
T ss_dssp             ----CEEEEEEC-CSTHHHHTHHHHHHSCS------SEEEEEEECSSC--TTHHHHHHHH---TCC------BCSSHHHH
T ss_pred             CCCCcceEEEEC-CCHHHHHHHHHHHHhCC------CeEEEEEECCCH--HHHHHHHHHc---CCC------ccCcHHHh
Confidence            778889999999 6999986 777776532      12554 899875  3333221111   111      23343332


Q ss_pred             cCCCcEEEEeC
Q 020022           79 CTGVNIAVMVG   89 (332)
Q Consensus        79 l~~aDiVi~~a   89 (332)
                      ..++|+|+++.
T Consensus        63 ~~~~D~V~i~t   73 (319)
T 1tlt_A           63 AASCDAVFVHS   73 (319)
T ss_dssp             HTTCSEEEECS
T ss_pred             hcCCCEEEEeC
Confidence            36899999884

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.96  E-value=0.0041  Score=59.90  Aligned_cols=74  Identities=8%  Similarity=0.084  Sum_probs=46.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee----CChhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT----TDAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~----~~~~~al   79 (332)
                      +++||+|+|| |.+|+.++..|+..+-      .+|+++|++.  ++++..+.. ..     ...+...    .+..+++
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g------~~V~v~~R~~--~ka~~la~~-~~-----~~~~~~D~~d~~~l~~~l   86 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDD------INVTVACRTL--ANAQALAKP-SG-----SKAISLDVTDDSALDKVL   86 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTT------EEEEEEESSH--HHHHHHHGG-GT-----CEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCC------CeEEEEECCH--HHHHHHHHh-cC-----CcEEEEecCCHHHHHHHH
Confidence            4568999995 9999999999987621      2799999874  333322211 00     0001111    1245667


Q ss_pred             CCCcEEEEeCCCC
Q 020022           80 TGVNIAVMVGGFP   92 (332)
Q Consensus        80 ~~aDiVi~~ag~~   92 (332)
                      +++|+||.+++..
T Consensus        87 ~~~DvVIn~tp~~   99 (467)
T 2axq_A           87 ADNDVVISLIPYT   99 (467)
T ss_dssp             HTSSEEEECSCGG
T ss_pred             cCCCEEEECCchh
Confidence            8999999998743

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.95  E-value=0.035  Score=49.83  Aligned_cols=69  Identities=13%  Similarity=0.150  Sum_probs=46.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..++|+|+| .|.+|..++..+...|.       +|..+|++.  ++++    .+....    .......+..+.++++|
T Consensus       154 ~g~~v~IiG-~G~iG~~~a~~l~~~G~-------~V~~~dr~~--~~~~----~~~~~g----~~~~~~~~l~~~l~~aD  215 (293)
T 3d4o_A          154 HGANVAVLG-LGRVGMSVARKFAALGA-------KVKVGARES--DLLA----RIAEMG----MEPFHISKAAQELRDVD  215 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHH----HHHHTT----SEEEEGGGHHHHTTTCS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCC-------EEEEEECCH--HHHH----HHHHCC----CeecChhhHHHHhcCCC
Confidence            357999999 69999999999987663       799999874  2221    111111    01111235677889999


Q ss_pred             EEEEeCC
Q 020022           84 IAVMVGG   90 (332)
Q Consensus        84 iVi~~ag   90 (332)
                      +|+.+..
T Consensus       216 vVi~~~p  222 (293)
T 3d4o_A          216 VCINTIP  222 (293)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9999863

>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*

Probab=95.94  E-value=0.019  Score=55.24  Aligned_cols=69  Identities=13%  Similarity=0.068  Sum_probs=42.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc------ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG------VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~------~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      +||+||| .|.+|.+++..|...      |+       ++...+...  .+....+.  ........ .  ...+..+++
T Consensus        55 KkIgIIG-lGsMG~AmA~nLr~s~~~~g~G~-------~ViVg~r~~--sks~e~A~--e~G~~v~d-~--ta~s~aEAa  119 (525)
T 3fr7_A           55 KQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI-------VVKIGLRKG--SKSFDEAR--AAGFTEES-G--TLGDIWETV  119 (525)
T ss_dssp             SEEEEEC-CTTHHHHHHHHHHHHHHHTTCCC-------EEEEEECTT--CSCHHHHH--HTTCCTTT-T--CEEEHHHHH
T ss_pred             CEEEEEe-EhHHHHHHHHHHHhcccccCCCC-------EEEEEeCCc--hhhHHHHH--HCCCEEec-C--CCCCHHHHH
Confidence            6999999 799999999999886      53       455454432  11111111  11110000 0  012467899


Q ss_pred             CCCcEEEEeC
Q 020022           80 TGVNIAVMVG   89 (332)
Q Consensus        80 ~~aDiVi~~a   89 (332)
                      ++||+||++.
T Consensus       120 ~~ADVVILaV  129 (525)
T 3fr7_A          120 SGSDLVLLLI  129 (525)
T ss_dssp             HHCSEEEECS
T ss_pred             hcCCEEEECC
Confidence            9999999984

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.94  E-value=0.0089  Score=55.29  Aligned_cols=65  Identities=14%  Similarity=0.105  Sum_probs=45.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+||| .|.||+.++..|...|.       +|..+|+...+    ....++  .       +....++.+.++.||+
T Consensus       168 g~tvGIIG-~G~IG~~vA~~l~~~G~-------~V~~~d~~~~~----~~~~~~--g-------~~~~~~l~ell~~aDv  226 (347)
T 1mx3_A          168 GETLGIIG-LGRVGQAVALRAKAFGF-------NVLFYDPYLSD----GVERAL--G-------LQRVSTLQDLLFHSDC  226 (347)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTC-------EEEEECTTSCT----THHHHH--T-------CEECSSHHHHHHHCSE
T ss_pred             CCEEEEEe-ECHHHHHHHHHHHHCCC-------EEEEECCCcch----hhHhhc--C-------CeecCCHHHHHhcCCE
Confidence            47999999 79999999999987653       78999986421    111111  1       1122357788899999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |++...
T Consensus       227 V~l~~P  232 (347)
T 1mx3_A          227 VTLHCG  232 (347)
T ss_dssp             EEECCC
T ss_pred             EEEcCC
Confidence            999854

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=95.94  E-value=0.039  Score=51.33  Aligned_cols=71  Identities=15%  Similarity=0.179  Sum_probs=42.3

Q ss_pred             cEEEEEcCCCchHHHHHH-HHHhcccCCCCCceEEEEEeCCCchhhhhhhH-HHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVP-MIARGVMLGTDQPVILHMLDIPPAAEALNGVK-MELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~-~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~-~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +||+|+||+|.+|+.+.. .|...+..    ..++.++.-..     .|.. .++...    ...+.. ....+.++++|
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~----~~~l~~~ss~~-----aG~~~~~~~~~----~~~~~~-~~~~~~~~~~D   66 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFD----LIEPVFFSTSQ-----IGVPAPNFGKD----AGMLHD-AFDIESLKQLD   66 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGG----GSEEEEEESSS-----TTSBCCCSSSC----CCBCEE-TTCHHHHTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCC----ceEEEEEeccc-----cCcCHHHhCCC----ceEEEe-cCChhHhccCC
Confidence            589999999999999998 77665421    12777774321     2221 122110    111111 11235578999


Q ss_pred             EEEEeCC
Q 020022           84 IAVMVGG   90 (332)
Q Consensus        84 iVi~~ag   90 (332)
                      +||.+.|
T Consensus        67 vvf~a~~   73 (370)
T 3pzr_A           67 AVITCQG   73 (370)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999865

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}

Probab=94.92  E-value=0.0012  Score=56.17  Aligned_cols=63  Identities=17%  Similarity=0.176  Sum_probs=44.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .|||+||| +|.+|+.++..|...+.       ++.++|+++  + .+.    +...      .+... +..++++++|+
T Consensus        19 ~~~I~iIG-~G~mG~~la~~L~~~G~-------~V~~~~r~~--~-~~~----~~~~------g~~~~-~~~~~~~~aDv   76 (201)
T 2yjz_A           19 QGVVCIFG-TGDFGKSLGLKMLQCGY-------SVVFGSRNP--Q-VSS----LLPR------GAEVL-CYSEAASRSDV   76 (201)
Confidence            46899999 79999999999987653       688998874  2 111    1110      12222 45677889999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ||++.
T Consensus        77 Vilav   81 (201)
T 2yjz_A           77 IVLAV   81 (201)
Confidence            99984

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=95.92  E-value=0.02  Score=54.19  Aligned_cols=90  Identities=19%  Similarity=0.248  Sum_probs=58.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|..++..|...|.       +|..+|+++  .+.. .+.  .+.       +. ..++.+++++||+
T Consensus       220 GktV~ViG-~G~IGk~vA~~Lra~Ga-------~Viv~D~dp--~ra~-~A~--~~G-------~~-v~~Leeal~~ADI  278 (435)
T 3gvp_A          220 GKQVVVCG-YGEVGKGCCAALKAMGS-------IVYVTEIDP--ICAL-QAC--MDG-------FR-LVKLNEVIRQVDI  278 (435)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHH-HHH--HTT-------CE-ECCHHHHTTTCSE
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHHCCC-------EEEEEeCCh--hhhH-HHH--HcC-------CE-eccHHHHHhcCCE
Confidence            46999999 69999999999987664       789999874  2211 111  111       11 1357889999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      ||.+.|.+.-  .+.            +   .+... ++++++++++.+
T Consensus       279 Vi~atgt~~l--I~~------------e---~l~~M-K~gailINvgrg  309 (435)
T 3gvp_A          279 VITCTGNKNV--VTR------------E---HLDRM-KNSCIVCNMGHS  309 (435)
T ss_dssp             EEECSSCSCS--BCH------------H---HHHHS-CTTEEEEECSST
T ss_pred             EEECCCCccc--CCH------------H---HHHhc-CCCcEEEEecCC
Confidence            9997443210  111            1   22233 467899999875

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.91  E-value=0.022  Score=55.60  Aligned_cols=119  Identities=20%  Similarity=0.175  Sum_probs=69.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCch-----------hhhhhhHHHHhhhhcCCccceEe-
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAA-----------EALNGVKMELVDAAFPLLKGVVA-   71 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~-----------~~l~~~~~dl~~~~~~~~~~~~~-   71 (332)
                      ...+.|+||+|.+|..++..|+..|. .     .++|. +++...           +.++....++....    .++.. 
T Consensus       251 ~~~vLITGgsgGIG~~lA~~La~~G~-~-----~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g----~~v~~~  320 (525)
T 3qp9_A          251 DGTVLVTGAEEPAAAEAARRLARDGA-G-----HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLG----ATATVV  320 (525)
T ss_dssp             TSEEEESSTTSHHHHHHHHHHHHHTC-C-----EEEEEECCCC---------------CHHHHHHHHHHT----CEEEEE
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCC-C-----EEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcC----CEEEEE
Confidence            36889999999999999999998764 1     47888 776311           22222333343221    11111 


Q ss_pred             e---CC---hhhhc------CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcCC---CeEEEEe
Q 020022           72 T---TD---AVEAC------TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAP---NCKVLVV  130 (332)
Q Consensus        72 ~---~~---~~~al------~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~~---~~~viv~  130 (332)
                      .   ++   ..+.+      ...|+||++||+....   ..+.   ...+..|+.....+.+.+.....+   ...||++
T Consensus       321 ~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~  400 (525)
T 3qp9_A          321 TCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLF  400 (525)
T ss_dssp             ECCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEE
T ss_pred             ECCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEE
Confidence            0   11   12222      3469999999986432   2233   345677888888888777765311   2456677


Q ss_pred             cCc
Q 020022          131 ANP  133 (332)
Q Consensus       131 tNP  133 (332)
                      |.-
T Consensus       401 SS~  403 (525)
T 3qp9_A          401 SSV  403 (525)
T ss_dssp             EEG
T ss_pred             CCH
Confidence            643

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=95.91  E-value=0.02  Score=49.64  Aligned_cols=56  Identities=21%  Similarity=0.240  Sum_probs=40.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEE-EEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc-CCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-TGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al-~~aD   83 (332)
                      |||+||| .|.||+.++..|...+.       ++ .++|.++   ..+.                 ..++..+.+ .++|
T Consensus         1 m~vgiIG-~G~mG~~~~~~l~~~g~-------~lv~v~d~~~---~~~~-----------------~~~~~~~l~~~~~D   52 (236)
T 2dc1_A            1 MLVGLIG-YGAIGKFLAEWLERNGF-------EIAAILDVRG---EHEK-----------------MVRGIDEFLQREMD   52 (236)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEECSSC---CCTT-----------------EESSHHHHTTSCCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCC-------EEEEEEecCc---chhh-----------------hcCCHHHHhcCCCC
Confidence            4899999 69999999988875442       55 6899863   1211                 234566666 6999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +||++.
T Consensus        53 vVv~~~   58 (236)
T 2dc1_A           53 VAVEAA   58 (236)
T ss_dssp             EEEECS
T ss_pred             EEEECC
Confidence            999985

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.91  E-value=0.0052  Score=56.11  Aligned_cols=64  Identities=13%  Similarity=0.100  Sum_probs=45.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|+.++..|...|+       +|..+|+++.  ...+    +..        .....++.+.+++||+
T Consensus       139 g~tvGIiG-~G~IG~~vA~~l~~~G~-------~V~~~dr~~~--~~~~----~~~--------~~~~~~l~ell~~aDi  196 (315)
T 3pp8_A          139 EFSVGIMG-AGVLGAKVAESLQAWGF-------PLRCWSRSRK--SWPG----VES--------YVGREELRAFLNQTRV  196 (315)
T ss_dssp             TCCEEEEC-CSHHHHHHHHHHHTTTC-------CEEEEESSCC--CCTT----CEE--------EESHHHHHHHHHTCSE
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHHCCC-------EEEEEcCCch--hhhh----hhh--------hcccCCHHHHHhhCCE
Confidence            47999999 79999999999987654       7899998742  1111    000        0111356788999999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |++..-
T Consensus       197 V~l~~P  202 (315)
T 3pp8_A          197 LINLLP  202 (315)
T ss_dssp             EEECCC
T ss_pred             EEEecC
Confidence            999853

>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}

Probab=95.90  E-value=0.015  Score=52.71  Aligned_cols=68  Identities=15%  Similarity=0.244  Sum_probs=39.1

Q ss_pred             CC-CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEE-EEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            1 MA-KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~-~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      |+ |+++||+||| .|.+|..++..|....      ..+++ ++|+++  ++++.       ...    .+....+..+ 
T Consensus         4 M~~M~~irv~IIG-~G~iG~~~~~~l~~~~------~~elvav~d~~~--~~~~~-------~g~----~~~~~~~l~~-   62 (304)
T 3bio_A            4 MTDDKKIRAAIVG-YGNIGRYALQALREAP------DFEIAGIVRRNP--AEVPF-------ELQ----PFRVVSDIEQ-   62 (304)
T ss_dssp             ----CCEEEEEEC-CSHHHHHHHHHHHHCT------TEEEEEEECC----------------CCT----TSCEESSGGG-
T ss_pred             CccCCCCEEEEEC-ChHHHHHHHHHHhcCC------CCEEEEEEcCCH--HHHHH-------cCC----CcCCHHHHHh-
Confidence            44 3568999999 6999999988887632      12665 789874  33321       000    1122334444 


Q ss_pred             cCCCcEEEEeC
Q 020022           79 CTGVNIAVMVG   89 (332)
Q Consensus        79 l~~aDiVi~~a   89 (332)
                      ..++|+|+++.
T Consensus        63 ~~~~DvViiat   73 (304)
T 3bio_A           63 LESVDVALVCS   73 (304)
T ss_dssp             SSSCCEEEECS
T ss_pred             CCCCCEEEECC
Confidence            37999999984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	332
d7mdha2	188	d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghu	2e-59
d5mdha2	179	d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (S	1e-57
d7mdha1	175	c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (	2e-57
d1y7ta2	173	d.162.1.1 (A:154-332) Malate dehydrogenase {Thermu	2e-51
d5mdha1	154	c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus s	1e-44
d1y7ta1	154	c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus th	3e-44
d1b8pa2	171	d.162.1.1 (A:159-329) Malate dehydrogenase {Aquasp	3e-42
d1ldma2	169	d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfi	4e-33
d1i0za2	172	d.162.1.1 (A:161-332) Lactate dehydrogenase {Human	1e-32
d1guza2	163	d.162.1.1 (A:143-305) Malate dehydrogenase {Chloro	1e-31
d2ldxa2	172	d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse	2e-31
d2cmda2	167	d.162.1.1 (A:146-312) Malate dehydrogenase {Escher	1e-30
d1llda2	170	d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifid	2e-30
d1uxja2	164	d.162.1.1 (A:144-307) Malate dehydrogenase {Chloro	6e-30
d1y6ja2	169	d.162.1.1 (A:149-317) Lactate dehydrogenase {Clost	6e-30
d1mlda2	169	d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (S	1e-29
d1ldna2	168	d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacil	9e-29
d1llca2	172	d.162.1.1 (A:165-334) Lactate dehydrogenase {Lacto	1e-27
d1pzga2	174	d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxop	2e-27
d1hyea2	168	d.162.1.1 (A:146-313) MJ0490, lactate/malate dehyd	3e-27
d1ez4a2	171	d.162.1.1 (A:163-334) Lactate dehydrogenase {Lacto	7e-27
d1a5za2	172	d.162.1.1 (A:164-333) Lactate dehydrogenase {Therm	3e-26
d1hyha2	163	d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehy	2e-25
d2cmda1	145	c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichi	5e-25
d1t2da2	165	d.162.1.1 (A:151-315) Lactate dehydrogenase {Malar	3e-24
d1mlda1	144	c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s	1e-22
d1o6za2	161	d.162.1.1 (A:163-330) Malate dehydrogenase {Archae	7e-22
d1o6za1	142	c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon	1e-19
d1guza1	142	c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium	9e-18
d1hyea1	145	c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydroge	9e-18
d1llda1	143	c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobac	5e-16
d1a5za1	140	c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermoto	2e-13
d1ojua1	142	c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon	1e-12
d1ez4a1	146	c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobac	5e-12
d1hyha1	146	c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydro	1e-11
d1ldna1	148	c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus	5e-11
d2ldxa1	159	c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mu	1e-09
d1y6ja1	142	c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridi	2e-09
d1up7a1	162	c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Ther	2e-09
d1i0za1	160	c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Ho	2e-09
d1uxja1	142	c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflex	3e-09
d1u8xx1	167	c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase	2e-07
d1pzga1	154	c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplas	3e-07
d1t2da1	150	c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria p	2e-05
d1s6ya1	169	c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Baci	2e-05
d1obba1	171	c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermoto	7e-05
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	3e-04
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	0.004

>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 188

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

 Score =  187 bits (475), Expect = 2e-59
 Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 6/171 (3%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           TRLD NRA  Q++ K  V    V NV IWGNHS++Q PD  +A ++     +PV+E++K 
Sbjct: 1   TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDG----RPVKEVIKR 56

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
             WL  EF  TVQ+RG A+I+    SSA S A S  D I+  V  TPEG W S GVY+ G
Sbjct: 57  TKWLEEEFTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTG 116

Query: 277 S-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 325
           + Y +   +++S P     +G++ +   +S D+F  +++  +  EL  EK 
Sbjct: 117 NPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAELLAEKK 167

>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 179

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  182 bits (462), Expect = 1e-57
 Identities = 120/177 (67%), Positives = 140/177 (79%), Gaps = 1/177 (0%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           TRLDHNRA  QI+ KL V   DVKNVIIWGNHSS+QYPDVNHA V   A E  V E VKD
Sbjct: 1   TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
           D+WL GEFITTVQQRGAA+IKARKLSSA+SAA + CDH+RD   GTPEG +VSMG+ SDG
Sbjct: 61  DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 120

Query: 277 -SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
            SY VP  L+YSFPVT ++  W IV+GL I++FSR+K+DLTA+EL+EEK  A+  LS
Sbjct: 121 NSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEKETAFEFLS 177

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

 Score =  181 bits (461), Expect = 2e-57
 Identities = 68/156 (43%), Positives = 90/156 (57%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
             K+ V + V+GAAG I   L+  +A G + G DQP+ L +L    + +AL GV MEL D
Sbjct: 20  SWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELED 79

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120
           + +PLL+ V    D  E    V+ A+++G  PR  GMER  ++  N  I+  Q  AL   
Sbjct: 80  SLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 139

Query: 121 AAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL 156
           A+ N KVLVV NP NTNALI  + AP IPAKN   L
Sbjct: 140 ASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHAL 175

>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 173

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  166 bits (420), Expect = 2e-51
 Identities = 88/170 (51%), Positives = 122/170 (71%), Gaps = 5/170 (2%)

Query: 156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK 215
           +TRLDHNRA  Q+++K    V  ++ + +WGNHSS+ +PD+ HA V+     +P  ELV 
Sbjct: 1   MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDG----RPALELVD 56

Query: 216 DDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSD 275
            + W    FI TV QRGAAII+AR  SSA SAA++A +HIRDW LGTPEG WVSM V S 
Sbjct: 57  ME-WYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQ 115

Query: 276 GSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 325
           G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E  
Sbjct: 116 GEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEME 165

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  147 bits (373), Expect = 1e-44
 Identities = 81/153 (52%), Positives = 108/153 (70%)

Query: 4   EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF 63
           EP+RVLVTGAAGQI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A 
Sbjct: 2   EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL 61

Query: 64  PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
           PLLK V+AT     A   +++A++VG  PR++GMERKD++  NV I+K Q +AL+++A  
Sbjct: 62  PLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKK 121

Query: 124 NCKVLVVANPANTNALILKEFAPSIPAKNITCL 156
           + KV+VV NPANTN L   + APSIP +N +CL
Sbjct: 122 SVKVIVVGNPANTNCLTASKSAPSIPKENFSCL 154

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  147 bits (371), Expect = 3e-44
 Identities = 85/152 (55%), Positives = 103/152 (67%)

Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA 62
           K PVRV VTGAAGQIGY+L+  IA G MLG DQPVIL +L+IP A +AL GV MEL D A
Sbjct: 2   KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA 61

Query: 63  FPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122
           FPLL G+ AT D   A    + A++VG  PRK GMER+D++  N  I+  Q  AL + A 
Sbjct: 62  FPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAK 121

Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNIT 154
            + KVLVV NPANTNALI  + AP +  +N T
Sbjct: 122 KDVKVLVVGNPANTNALIAYKNAPGLNPRNFT 153

>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum arcticum [TaxId: 87645]} Length = 171

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Aquaspirillum arcticum [TaxId: 87645]

 Score =  142 bits (358), Expect = 3e-42
 Identities = 86/168 (51%), Positives = 116/168 (69%), Gaps = 5/168 (2%)

Query: 158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD 217
           RLDHNRAL QI+ K    VS ++ + +WGNHS + Y D  +A +        V++++ DD
Sbjct: 2   RLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQI----DGASVKDMINDD 57

Query: 218 AWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS 277
           AW    F+ TV +RGAAII AR +SSA SAA++A DHI DWVLGT    W +MG+ SDGS
Sbjct: 58  AWNRDTFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAG-KWTTMGIPSDGS 116

Query: 278 YNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 325
           Y +P G+I+ FPVT  NGE+ IVQGLSID FS++++++T  EL EE+ 
Sbjct: 117 YGIPEGVIFGFPVTTENGEYKIVQGLSIDAFSQERINVTLNELLEEQN 164

>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish (Squalus acanthias) [TaxId: 7797]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Dogfish (Squalus acanthias) [TaxId: 7797]

 Score =  118 bits (296), Expect = 4e-33
 Identities = 21/173 (12%), Positives = 49/173 (28%), Gaps = 7/173 (4%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
             LD  R    + E+L V        +I   H  S     +   V +      +  L   
Sbjct: 3   CNLDSARFRYLMGERLGVHSCSCHGWVIGE-HGDSVPSVWSGMNVAS----IKLHPLDGT 57

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
           +               +A    +       A   +   + + ++         +      
Sbjct: 58  NKDKQDWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAETIMKNLCR-VHPVSTMVKD 116

Query: 277 SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSE-EKALAY 328
            Y +   +  S P    +   + +  + +     ++L  +A  L + +K L +
Sbjct: 117 FYGIKDNVFLSLPCVLNDHGISNIVKMKLKPNEEQQLQKSATTLWDIQKDLKF 169

>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

 Score =  117 bits (293), Expect = 1e-32
 Identities = 27/169 (15%), Positives = 54/169 (31%), Gaps = 3/169 (1%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
             LD  R    ++EKL +  S   +  I G H  S     +   V   + ++   E+  D
Sbjct: 3   CNLDSARFRYLMAEKLGIHPSSC-HGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTD 61

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
           +   N + +  +    A  +   K  +  + A           +         +     G
Sbjct: 62  NDSENWKEVHKMVVESAYEVIKLKGYT--NWAIGLSVADLIESMLKNLSRIHPVSTMVKG 119

Query: 277 SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 325
            Y +   +  S P        T V    + +    +L  +A+ L + + 
Sbjct: 120 MYGIENEVFLSLPCILNARGLTSVINQKLKDDEVAQLKKSADTLWDIQK 168

>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Length = 163

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

 Score =  114 bits (286), Expect = 1e-31
 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 9/164 (5%)

Query: 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDA 218
           LD  R    I+ +L V + D+ N  + G H  +  P V + TV        +       A
Sbjct: 4   LDAARFRSFIAMELGVSMQDI-NACVLGGHGDAMVPVVKYTTVAGIPISDLL------PA 56

Query: 219 WLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY 278
               + +   +  GA I++  K  SA  A +S+   + + ++       +   V  +G Y
Sbjct: 57  ETIDKLVERTRNGGAEIVEHLKQGSAFYAPASSVVEMVESIVL-DRKRVLPCAVGLEGQY 115

Query: 279 NVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSE 322
            +    +       RNG   I + +++D+     L  +A+ + E
Sbjct: 116 GIDKTFVGVPVKLGRNGVEQIYE-INLDQADLDLLQKSAKIVDE 158

>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  114 bits (285), Expect = 2e-31
 Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 3/169 (1%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
             LD  R    I EKL V  +   +  + G H  S  P  +   V     +     +  D
Sbjct: 3   CNLDSARFRYLIGEKLGVNPTSC-HGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTD 61

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
               + + +      G   +   K  +  S A           +         +     G
Sbjct: 62  KNKQHWKNVHKQVVEGGYEVLDMKGYT--SWAIGLSVTDLARSILKNLKRVHPVTTLVKG 119

Query: 277 SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 325
            + +   +  S P        T    +++       L  +A+ L   + 
Sbjct: 120 FHGIKEEVFLSIPCVLGESGITDFVKVNMTAEEEGLLKKSADTLWNMQK 168

>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 167

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  112 bits (280), Expect = 1e-30
 Identities = 21/175 (12%), Positives = 53/175 (30%), Gaps = 15/175 (8%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           T LD  R+   ++E    Q  +V+  +I G+   +  P ++                   
Sbjct: 2   TTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGV------------SF 49

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
                 +    +Q  G  +++A+    + + +           L         +   +  
Sbjct: 50  TEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYV 109

Query: 277 SYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSE--EKALAY 328
             +      +S P+   +NG        ++  F +  L+   + L +       +
Sbjct: 110 EGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGQEF 164

>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Length = 170

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

 Score =  111 bits (279), Expect = 2e-30
 Identities = 30/167 (17%), Positives = 51/167 (30%), Gaps = 5/167 (2%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK- 215
           T LD  R    I+++  V V +V +  I G H  S+ P    AT+               
Sbjct: 1   TNLDSARLRFLIAQQTGVNVKNV-HAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHD 59

Query: 216 DDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSD 275
                  E I    +  A  I   K ++  +   S  D I   +        + +     
Sbjct: 60  PLDADKREEIHQEVKNAAYKIINGKGATNYAIGMSGVDIIEAVL--HDTNRILPVSSMLK 117

Query: 276 GSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSE 322
             + +    +    +  R G         + +     L  +AE L E
Sbjct: 118 DFHGISDICMSVPTLLNRQG-VNNTINTPVSDKELAALKRSAETLKE 163

>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Length = 164

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

 Score =  109 bits (274), Expect = 6e-30
 Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDA 218
           LD  R    I+ +  V V DV   ++ G H     P    +T++     + +        
Sbjct: 4   LDAARYRTFIAMEAGVSVKDV-QAMLMGGHGDEMVPLPRFSTISGIPVSEFI------AP 56

Query: 219 WLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY 278
               + +   ++ G  I+   K  SA  A ++A   + + VL   +   + +  Y  G Y
Sbjct: 57  DRLAQIVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLK-DKKRVMPVAAYLTGQY 115

Query: 279 NVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 323
            +         +    G    +  L ++E     L+ +A+ +   
Sbjct: 116 GLNDIYFGVPVILGAGG-VEKILELPLNEEEMALLNASAKAVRAT 159

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

 Score =  109 bits (274), Expect = 6e-30
 Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 4/167 (2%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           T LD  R    +SEKL V V +V +  I G H  SQ P  +   +      + + +   +
Sbjct: 1   TVLDSIRFRYLLSEKLGVDVKNV-HGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCN 59

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
               + + I    +   A I   K ++    A S    +   +    + T  ++G   +G
Sbjct: 60  FTEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVETLL--KNQNTIRTVGTVING 117

Query: 277 SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 323
            Y +    I   P    +     V   ++     + L  +AE++ + 
Sbjct: 118 MYGIEDVAIS-LPSIVNSEGVQEVLQFNLTPEEEEALRFSAEQVKKV 163

>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  109 bits (272), Expect = 1e-29
 Identities = 27/175 (15%), Positives = 57/175 (32%), Gaps = 14/175 (8%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           T LD  RA   ++E   +  + V   +I G+   +  P ++  T      +  +  L   
Sbjct: 2   TTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTGR 61

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
                      +Q+ G  ++KA+  + + + + +       + L         +   S  
Sbjct: 62  -----------IQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFV 110

Query: 277 SYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSE--EKALAY 328
                    +S P+   + G    +    I  F  K +     EL    +K   +
Sbjct: 111 KSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEF 165

>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score =  107 bits (267), Expect = 9e-29
 Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 5/173 (2%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           T LD  R    + E  +V   +V +  I G H  ++ P  + A +      K V    ++
Sbjct: 1   TILDTARFRFLLGEYFSVAPQNV-HAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEE 59

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
                 E I    +  A  I  +K ++    A       R           +        
Sbjct: 60  AQKDL-ERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAI---LHNENAILTVSAYLD 115

Query: 277 SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYS 329
                  +    P          V  + +++  + +   +A  L    A A++
Sbjct: 116 GLYGERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAFT 168

>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus casei [TaxId: 1582]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

 Score =  104 bits (259), Expect = 1e-27
 Identities = 37/173 (21%), Positives = 65/173 (37%), Gaps = 7/173 (4%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           T LD  R    I+E +NV    V +  I G H  +++P  +HA +      + V+   + 
Sbjct: 1   TSLDTARFRQSIAEMVNVDARSV-HAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEI 59

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
                 +    V+     IIK   L  A     +         +   E   + + VY DG
Sbjct: 60  KEDKLVKMFEDVRDAAYEIIK---LKGATFYGIATALARISKAILNDENAVLPLSVYMDG 116

Query: 277 SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSE--EKALA 327
            Y +    I +  V  RNG    +  + + +   + +  +A +L +    A A
Sbjct: 117 QYGINDLYIGTPAVINRNG-IQNILEIPLTDHEEESMQKSASQLKKVLTDAFA 168

>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Length = 174

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

 Score =  103 bits (258), Expect = 2e-27
 Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 4/167 (2%)

Query: 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDA 218
           LD  R    +++ L+V   DV    + G H     P V + TVN    +K +++ V  + 
Sbjct: 4   LDSGRFRRYVADALSVSPRDV-QATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62

Query: 219 WLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY 278
            L  E     +  G  I++     SA  A +++   +    L   E   +   VY +G Y
Sbjct: 63  QLE-EIAEHTKVSGGEIVRFLGQGSAYYAPAASAVAMATSFL-NDEKRVIPCSVYCNGEY 120

Query: 279 NVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 325
            +    I   P          V  L ++E  +K+   + +++     
Sbjct: 121 GLKDMFIGL-PAVIGGAGIERVIELELNEEEKKQFQKSVDDVMALNK 166

>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 168

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score =  103 bits (256), Expect = 3e-27
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 8/169 (4%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           T LD  R    I++   V + +V    I G H  S  P ++  ++          +  + 
Sbjct: 3   THLDSLRFKVAIAKFFGVHIDEV-RTRIIGEHGDSMVPLLSATSIG-----GIPIQKFER 56

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
              L  + I    +     I   K  S    A++  + +R  V    E   +++  Y DG
Sbjct: 57  FKELPIDEIIEDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIV--NNEKRLLTLSAYVDG 114

Query: 277 SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 325
            ++    +    PV         V  + +D+        +AE + +   
Sbjct: 115 EFDGIRDVCIGVPVKIGRDGIEEVVSIELDKDEIIAFRKSAEIIKKYCE 163

>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Length = 171

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

 Score =  102 bits (254), Expect = 7e-27
 Identities = 33/173 (19%), Positives = 58/173 (33%), Gaps = 8/173 (4%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           T LD +R    + ++ NV    V +  I G H  S++   + AT+ T    +PVR++ K+
Sbjct: 1   TSLDSSRLRVALGKQFNVDPRSV-DAYIMGEHGDSEFAAYSTATIGT----RPVRDVAKE 55

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
               + +                 L  A               +   E   + +G Y DG
Sbjct: 56  QGVSDDDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDG 115

Query: 277 SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSE--EKALA 327
            Y +   +    P          +    +     KK+  +A  L +     LA
Sbjct: 116 QYGL-NDIYIGTPAIIGGTGLKQIIESPLSADELKKMQDSAATLKKVLNDGLA 167

>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  100 bits (249), Expect = 3e-26
 Identities = 33/167 (19%), Positives = 57/167 (34%), Gaps = 5/167 (2%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           T LD  R    I++        V +V + G H  S+ P  + A +     +   +   K 
Sbjct: 2   TVLDTARLRTLIAQHCGFSPRSV-HVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKC 60

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
           D+ +   F    + R A  I  RK ++  + A +  D +        +   V        
Sbjct: 61  DSKILENFAEKTK-RAAYEIIERKGATHYAIALAVADIVESI---FFDEKRVLTLSVYLE 116

Query: 277 SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 323
            Y     L  S PVT        +  L+++E   +    +A  L   
Sbjct: 117 DYLGVKDLCISVPVTLGKHGVERILELNLNEEELEAFRKSASILKNA 163

>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Length = 163

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

 Score = 98.0 bits (243), Expect = 2e-25
 Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 13/167 (7%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
           T LD  R    + E  ++    V +    G H +SQ+   +   V      +P+  L   
Sbjct: 2   TLLDTARMQRAVGEAFDLDPRSV-SGYNLGEHGNSQFVAWSTVRVMG----QPIVTLADA 56

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
                       ++ G  ++   K  ++   A+SA    +            +       
Sbjct: 57  GDIDLAAIEEEARKGGFTVLNG-KGYTSYGVATSAIRIAKAV-------MADAHAELVVS 108

Query: 277 SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 323
           +     G+  S+P             L +    ++KL  + + + + 
Sbjct: 109 NRRDDMGMYLSYPAIIGRDGVLAETTLDLTTDEQEKLLQSRDYIQQR 155

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 96.2 bits (239), Expect = 5e-25
 Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 16/160 (10%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           +V V GAAG IG AL  ++   +  G++    L + DI P      GV ++L      + 
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPSGSE----LSLYDIAPVTP---GVAVDLSHIPTAVK 54

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
               +  DA  A  G ++ ++  G  RK GM+R D+ + N  I K     + +   P   
Sbjct: 55  IKGFSGEDATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKAC 113

Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
           + ++ NP NT   I  E                D N+  G
Sbjct: 114 IGIITNPVNTTVAIAAEVLKK--------AGVYDKNKLFG 145

>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 165

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 94.9 bits (235), Expect = 3e-24
 Identities = 37/169 (21%), Positives = 60/169 (35%), Gaps = 6/169 (3%)

Query: 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDA 218
           LD +R    IS+KLNV   DV   I+ G H +       + TV     ++ +   +  DA
Sbjct: 3   LDTSRLKYYISQKLNVCPRDVNAHIV-GAHGNKMVLLKRYITVGGIPLQEFINNKLISDA 61

Query: 219 WLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY 278
            L    I       A  I     S  ++ A++  +    ++        +      +G Y
Sbjct: 62  ELE--AIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYL--KDLKKVLICSTLLEGQY 117

Query: 279 NVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALA 327
              + +    PV         V  L ++   + K D    E    KALA
Sbjct: 118 G-HSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRMKALA 165

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 89.7 bits (222), Expect = 1e-22
 Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 19/161 (11%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL- 65
           +V V GA+G IG  L  ++    ++       L + DI        GV  +L        
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSR-----LTLYDIAHT----PGVAADLSHIETRAT 52

Query: 66  LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC 125
           +KG +      +   G ++ V+  G PRK GM R D+ + N +I     +A  QH  P+ 
Sbjct: 53  VKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDA 111

Query: 126 KVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
            + +++NP N+   I  E                + N+  G
Sbjct: 112 MICIISNPVNSTIPITAEVFKK--------HGVYNPNKIFG 144

>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 161

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

 Score = 88.3 bits (218), Expect = 7e-22
 Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 13/167 (7%)

Query: 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 216
            RLD  R    +SE+ +  V +V    I G H  +Q P  +  +V+             +
Sbjct: 3   GRLDSARFRYVLSEEFDAPVQNV-EGTILGEHGDAQVPVFSKVSVDGT---------DPE 52

Query: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
            +    E +    Q  A  +  RK ++    A      +        +   V        
Sbjct: 53  FSGDEKEQLLGDLQESAMDVIERKGATEWGPARGVAHMVEAI---LHDTGEVLPASVKLE 109

Query: 277 SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 323
                    +  PV+  +     +    +D++ +  +   AE+LS++
Sbjct: 110 GEFGHEDTAFGVPVSLGSNGVEEIVEWDLDDYEQDLMADAAEKLSDQ 156

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

 Score = 81.9 bits (202), Expect = 1e-19
 Identities = 35/160 (21%), Positives = 55/160 (34%), Gaps = 19/160 (11%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           +V V GAAG +G A    IA       D    +  +DIP   +   G   +         
Sbjct: 2   KVSVVGAAGTVGAAAGYNIALR-----DIADEVVFVDIPDKEDDTVGQAADTNHGI-AYD 55

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
                     E   G ++ V+  G PR+ G  R D+   N  I +   S+L++H   +  
Sbjct: 56  SNTRVRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYI 114

Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
            L  +NP +     L E                   + +G
Sbjct: 115 SLTTSNPVDLLNRHLYE------------AGDRSREQVIG 142

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

 Score = 76.7 bits (188), Expect = 9e-18
 Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           ++ V GA G +G      +A   +    + V+L +++  P  +AL+   M          
Sbjct: 2   KITVIGA-GNVGATTAFRLAEKQL--ARELVLLDVVEGIPQGKALD---MYESGPVGLFD 55

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
             V  + D        +I ++  G PRK GM R+D++ KN  I K     + +H + N  
Sbjct: 56  TKVTGSND-YADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPI 113

Query: 127 VLVVANPANTNALILKEFAPSIPAKNI 153
           ++VV+NP +    +    +  +P + +
Sbjct: 114 IIVVSNPLDIMTHVAWVRS-GLPKERV 139

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 76.7 bits (188), Expect = 9e-18
 Identities = 31/163 (19%), Positives = 65/163 (39%), Gaps = 22/163 (13%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           +V + GA+G++G A   ++A+   +       L ++    +   L G++ ++ DA     
Sbjct: 2   KVTIIGASGRVGSATALLLAKEPFMKD-----LVLIGREHSINKLEGLREDIYDALAGTR 56

Query: 67  ---KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP 123
                 V + + +      ++ ++  G PRKEGM R D+   N  I    A  + +    
Sbjct: 57  SDANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-- 114

Query: 124 NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
           + K+ V+ NP +                     ++ + N+  G
Sbjct: 115 DTKIFVITNPVDVMTYKALVD------------SKFERNQVFG 145

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Length = 143

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

 Score = 71.9 bits (176), Expect = 5e-16
 Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 21/162 (12%)

Query: 5   PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP 64
           P ++ V GA G +G  L    A+       + +   ++    A E +    +++   +  
Sbjct: 1   PTKLAVIGA-GAVGSTLAFAAAQ-------RGIAREIVLEDIAKERVEAEVLDMQHGSSF 52

Query: 65  LLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN 124
                +  +D  E C   ++ V+  G  +K G  R +++   V+I KA    L + A PN
Sbjct: 53  YPTVSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVA-PN 111

Query: 125 CKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
              +++ NP +    + ++            LT L  N+  G
Sbjct: 112 AIYMLITNPVDIATHVAQK------------LTGLPENQIFG 141

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 140

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 64.3 bits (156), Expect = 2e-13
 Identities = 26/160 (16%), Positives = 59/160 (36%), Gaps = 22/160 (13%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           ++ + G  G++G +    +         +     M+ I    +   G  ++L+    P  
Sbjct: 2   KIGIVGL-GRVGSSTAFALLM-------KGFAREMVLIDVDKKRAEGDALDLIHGT-PFT 52

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
           +             G ++ ++  G P+K G  R  ++ +N  + K  A  + ++A P+  
Sbjct: 53  RRANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSI 111

Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
           V+VV NP +       +             + +D  +  G
Sbjct: 112 VIVVTNPVDVLTYFFLK------------ESGMDPRKVFG 139

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 62.0 bits (150), Expect = 1e-12
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 10/140 (7%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           ++   GA G++G          + +       + ++DI    +   G  M+L  AA  + 
Sbjct: 2   KLGFVGA-GRVGSTSAFTCLLNLDVDE-----IALVDIAE--DLAVGEAMDLAHAAAGID 53

Query: 67  KGVVAT-TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC 125
           K              G  I V+  G  RK GM R D+  KN  I K  A  + ++ AP  
Sbjct: 54  KYPKIVGGADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APES 112

Query: 126 KVLVVANPANTNALILKEFA 145
           K+LVV NP +    I+ + +
Sbjct: 113 KILVVTNPMDVMTYIMWKES 132

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Length = 146

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

 Score = 60.4 bits (146), Expect = 5e-12
 Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 10/139 (7%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           +V++ G  G +G +    +A+          I     I    +         ++ A    
Sbjct: 7   KVVLVGD-GAVGSSYAFAMAQQG--------IAEEFVIVDVVKDRTKGDALDLEDAQAFT 57

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
                 +     C   ++ V+  G P+K G  R D+++KN++I  +    +      +  
Sbjct: 58  APKKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGI 116

Query: 127 VLVVANPANTNALILKEFA 145
            LV ANP +       +F+
Sbjct: 117 FLVAANPVDILTYATWKFS 135

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Length = 146

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

 Score = 59.7 bits (144), Expect = 1e-11
 Identities = 20/164 (12%), Positives = 56/164 (34%), Gaps = 25/164 (15%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           ++ + G  G +G A+   +         Q V    + I      +   +++  DA   L 
Sbjct: 3   KIGIIGL-GNVGAAVAHGLIA-------QGVADDYVFIDANEAKVKADQIDFQDAMANLE 54

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPR----KEGMERKDVMSKNVSIYKAQASALEQHAA 122
                  +   A    ++ +   G  +        +R   +    S+ ++  + L++   
Sbjct: 55  AHGNIVINDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG- 113

Query: 123 PNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
            +  ++V++NP +    + +             +T    ++ +G
Sbjct: 114 FHGVLVVISNPVDVITALFQH------------VTGFPAHKVIG 145

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 148

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 57.8 bits (139), Expect = 5e-11
 Identities = 33/160 (20%), Positives = 59/160 (36%), Gaps = 21/160 (13%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           RV+V GA G +G + V  +         Q +   ++ I        G  M+         
Sbjct: 8   RVVVIGA-GFVGASYVFALMN-------QGIADEIVLIDANESKAIGDAMDFNHGKVFAP 59

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
           K V       + C   ++ V+  G  +K G  R D++ KN++I+++   ++         
Sbjct: 60  KPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGL 118

Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
            LV  NP +       +F            + L H R +G
Sbjct: 119 FLVATNPVDILTYATWKF------------SGLPHERVIG 146

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 159

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.6 bits (131), Expect = 1e-09
 Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 21/162 (12%)

Query: 5   PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP 64
             ++ V G  G +G A    I    + G    + L    +    + L G  ++L   +  
Sbjct: 19  RCKITVVGV-GDVGMACAISIL---LKGLADELAL----VDADTDKLRGEALDLQHGSLF 70

Query: 65  LLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN 124
           L    +             + ++  G     G  R D++ +NV+I KA    + Q++ P+
Sbjct: 71  LSTPKIVFGKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNS-PD 129

Query: 125 CKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
           CK++VV NP +    ++ +            ++     R +G
Sbjct: 130 CKIIVVTNPVDILTYVVWK------------ISGFPVGRVIG 159

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

 Score = 53.1 bits (127), Expect = 2e-09
 Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 22/160 (13%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           +V + GA G +G +    +A       +    L ++D+    E   G  M++     P +
Sbjct: 3   KVAIIGA-GFVGASAAFTMALR-QTANE----LVLIDVFK--EKAIGEAMDINHGL-PFM 53

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
             +             ++ V+  G  RK G  R D+  KNV I K     + ++   +  
Sbjct: 54  GQMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGV 112

Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
           +LVV+NP +    +++++            + L   + +G
Sbjct: 113 ILVVSNPVDIITYMIQKW------------SGLPVGKVIG 140

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} Length = 162

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

 Score = 53.5 bits (128), Expect = 2e-09
 Identities = 14/155 (9%), Positives = 40/155 (25%), Gaps = 26/155 (16%)

Query: 14  AGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA 71
            G       P + +G++  ++   I  +   DI    +    + ++ V         V+ 
Sbjct: 8   GGSSY---TPELVKGLLDISEDVRIDEVIFYDIDEEKQ---KIVVDFVKRLVKDRFKVLI 61

Query: 72  TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAS---------------- 115
           +     A       +        +G E  + +     +   + +                
Sbjct: 62  SDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVE 121

Query: 116 --ALEQHAAPNCKVLVVANPANTNALILKEFAPSI 148
                     N  ++   NP+      ++ +    
Sbjct: 122 EYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYE 156

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Length = 160

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 2e-09
 Identities = 31/160 (19%), Positives = 66/160 (41%), Gaps = 21/160 (13%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           ++ V G  GQ+G A    I         + +   +  +    + L G  M+L   +  L 
Sbjct: 22  KITVVGV-GQVGMACAISILG-------KSLADELALVDVLEDKLKGEMMDLQHGSLFLQ 73

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
              +             I V+  G  ++EG  R +++ +NV+++K     + +++ P+C 
Sbjct: 74  TPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYS-PDCI 132

Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
           ++VV+NP +    +  +            L+ L  +R +G
Sbjct: 133 IIVVSNPVDILTYVTWK------------LSGLPKHRVIG 160

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

 Score = 52.7 bits (126), Expect = 3e-09
 Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 21/161 (13%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           ++ + GA G +G      +A          V+L +++  P  +AL+   +          
Sbjct: 3   KISIIGA-GFVGSTTAHWLAAK---ELGDIVLLDIVEGVPQGKALD---LYEASPIEGFD 55

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126
             V  T +        ++ V+  G PRK GM R+D++  N  I +A  S     + PN  
Sbjct: 56  VRVTGTNNY-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAV 113

Query: 127 VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQ 167
           +++V NP +    +  E            ++     R +GQ
Sbjct: 114 IIMVNNPLDAMTYLAAE------------VSGFPKERVIGQ 142

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 24/168 (14%), Positives = 51/168 (30%), Gaps = 27/168 (16%)

Query: 3   KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKMELVD 60
           K+   +++ G     G    P I   ++   ++  I  L + D     +       ++  
Sbjct: 1   KKSFSIVIAGG----GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFI 56

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKN-------------- 106
                     ATTD  EA T V+  +      +       + +                 
Sbjct: 57  REKAPDIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGI 116

Query: 107 ------VSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI 148
                 +         +E+++ P+  +L  +NPA   A   +   P+ 
Sbjct: 117 AYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNPAAIVAEATRRLRPNS 163

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

 Score = 47.4 bits (112), Expect = 3e-07
 Identities = 27/171 (15%), Positives = 59/171 (34%), Gaps = 25/171 (14%)

Query: 1   MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD 60
           + +   +V + G+ G IG  +  + A        +   + + D+         + +  V 
Sbjct: 3   LVQRRKKVAMIGS-GMIGGTMGYLCALR------ELADVVLYDVVKGMPEGKALDLSHVT 55

Query: 61  AAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEG-----MERKDVMSKNVSIYKAQAS 115
           +       V A      A TG +  ++  G  +  G       R D++  N  I +    
Sbjct: 56  SVVDTNVSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQ 115

Query: 116 ALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
            ++++  P   ++VV NP +    ++ E             + +  N   G
Sbjct: 116 NIKKYC-PKTFIIVVTNPLDCMVKVMCE------------ASGVPTNMICG 153

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 150

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 25/165 (15%), Positives = 62/165 (37%), Gaps = 26/165 (15%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL 66
           ++++ G+ G IG  +  +I +  +        + + DI         +     +      
Sbjct: 5   KIVLVGS-GMIGGVMATLIVQKNL------GDVVLFDIVKNMPHGKALDTSHTNV-MAYS 56

Query: 67  KGVVATTDAVEACTGVNIAVMVGGFPRKEGME-----RKDVMSKNVSIYKAQASALEQHA 121
              V+ ++  +   G ++ ++  GF +  G       R D++  N  I       ++++ 
Sbjct: 57  NCKVSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC 116

Query: 122 APNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166
            PN  ++VV NP +    +L +             + +  N+ +G
Sbjct: 117 -PNAFIIVVTNPVDVMVQLLHQ------------HSGVPKNKIIG 148

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} Length = 169

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 19/158 (12%), Positives = 43/158 (27%), Gaps = 26/158 (16%)

Query: 14  AGQIGYALVPMIARGVMLGTDQPVI--LHMLDIPPAAEALNGVKM--ELVDAAFPLLKGV 69
            G       P +  G++    +  +  L ++DIP   E L  V    + +     +   +
Sbjct: 9   GGSSY---TPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI 65

Query: 70  VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALE----------- 118
             T D   A  G +           E   + + +     +   + +              
Sbjct: 66  HLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPV 125

Query: 119 --------QHAAPNCKVLVVANPANTNALILKEFAPSI 148
                   +   P+  ++   NPA      +  +    
Sbjct: 126 ILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQE 163

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.5 bits (94), Expect = 7e-05
 Identities = 16/161 (9%), Positives = 37/161 (22%), Gaps = 32/161 (19%)

Query: 14  AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FPLLKGVVA 71
           AG   ++L  +     +  T       +  +    E L+ +                   
Sbjct: 10  AGSAVFSLRLV---SDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK 66

Query: 72  TTDAVEACTGVNIAVMVGGFPRKEGMERKDV--------------------------MSK 105
           T +  +     +  +          +E+                                
Sbjct: 67  TMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYN 126

Query: 106 NVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP 146
            +  +   A  +E+ + P    L  ANP      ++    P
Sbjct: 127 QLKYFVDIARKIEKLS-PKAWYLQAANPIFEGTTLVTRTVP 166

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 39.9 bits (92), Expect = 3e-04
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 7  RVLVTGAAGQIGYALVPM-IARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP 64
          RV + G  G +G A+      RG V L       L++LD     +     +++ V  A  
Sbjct: 4  RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAA 63

Query: 65 LLKGVVATTDAVEACTGVNI 84
           + G+VA           N+
Sbjct: 64 KVGGIVANNTYPADFIYQNM 83

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 3/22 (13%)

Query: 1  MAKEPVRVLVTGAAGQIGYALV 22
          MA+   +VLVTG AG IG   V
Sbjct: 1  MAE---KVLVTGGAGYIGSHTV 19

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.1 bits (82), Expect = 0.004
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 1  MAKEPVRVLVTGAAGQIGYALV 22
          +  +P   L+TG AG IG  L+
Sbjct: 12 LPAQPKVWLITGVAGFIGSNLL 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	332
d7mdha2	188	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	100.0
d5mdha2	179	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	100.0
d1y7ta2	173	Malate dehydrogenase {Thermus thermophilus [TaxId:	100.0
d1b8pa2	171	Malate dehydrogenase {Aquaspirillum arcticum [TaxI	100.0
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	100.0
d1i0za2	172	Lactate dehydrogenase {Human (Homo sapiens), heart	100.0
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	100.0
d1y6ja2	169	Lactate dehydrogenase {Clostridium thermocellum [T	100.0
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	100.0
d1hyea2	168	MJ0490, lactate/malate dehydrogenase {Archaeon Met	100.0
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	100.0
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	100.0
d1ojua2	152	Lactate dehydrogenase {Archaeon Archaeoglobus fulg	100.0
d1llda2	170	Lactate dehydrogenase {Bifidobacterium longum, str	100.0
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	100.0
d1ez4a2	171	Lactate dehydrogenase {Lactobacillus pentosus [Tax	100.0
d1hyha2	163	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	100.0
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	100.0
d1guza2	163	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	100.0
d1uxja2	164	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	100.0
d1pzga2	174	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	100.0
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	100.0
d1a5za2	172	Lactate dehydrogenase {Thermotoga maritima [TaxId:	100.0
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	100.0
d1ldma2	169	Lactate dehydrogenase {Dogfish (Squalus acanthias)	100.0
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	100.0
d1t2da2	165	Lactate dehydrogenase {Malaria parasite (Plasmodiu	99.98
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	99.98
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	99.98
d2ldxa2	172	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	99.97
d1ldna2	168	Lactate dehydrogenase {Bacillus stearothermophilus	99.97
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	99.97
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	99.97
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	99.97
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	99.97
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.97
d1llca2	172	Lactate dehydrogenase {Lactobacillus casei [TaxId:	99.97
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	99.97
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	99.97
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	99.97
d1o6za2	161	Malate dehydrogenase {Archaeon Haloarcula marismor	99.97
d1mlda2	169	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.96
d2cmda2	167	Malate dehydrogenase {Escherichia coli [TaxId: 562	99.95
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	99.92
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	99.91
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	99.9
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	99.89
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	99.48
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	99.14
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	98.92
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.92
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.89
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.72
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.65
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	98.61
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	98.6
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	98.57
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	98.54
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.51
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.49
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	98.47
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.46
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.46
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.44
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	98.42
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.39
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.37
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.36
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.33
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.25
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.21
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	98.2
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.19
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.18
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.17
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.17
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.13
d1up7a2	253	6-phospho-beta-glucosidase {Thermotoga maritima [T	98.13
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.11
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	98.1
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.1
d1s6ya2	270	6-phospho-beta-glucosidase {Bacillus stearothermop	98.06
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	98.04
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	98.02
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.0
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.93
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.92
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.92
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.91
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.9
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.89
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.82
d1u8xx2	276	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	97.82
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	97.8
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.79
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.74
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.71
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.69
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.68
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.68
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.67
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.67
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.62
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.61
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.6
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.59
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.57
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.57
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.54
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.54
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.54
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.53
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.53
d1obba2	308	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	97.53
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.51
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.5
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	97.44
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.43
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	97.43
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.43
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.43
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.4
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.39
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.38
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.37
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.36
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.35
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.35
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.34
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.31
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.29
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.27
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.25
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.25
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.24
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.23
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.2
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.19
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.19
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.17
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.17
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.15
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.15
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.13
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.13
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.12
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.11
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.08
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.08
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.08
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.05
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.99
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	96.88
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.87
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.84
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	96.82
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.79
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.72
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.72
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	96.69
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.67
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.65
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.58
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.56
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.53
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.51
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.5
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.49
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.44
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.41
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.39
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.37
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.36
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.25
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.14
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.0
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.98
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.94
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.94
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.9
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	95.88
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.84
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.82
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.78
d1dxha2	185	Ornithine transcarbamoylase {Pseudomonas aeruginos	95.77
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.74
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.73
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.63
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.62
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	95.6
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.57
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.56
d1vjta2	278	Putative alpha-glucosidase TM0752 {Thermotoga mari	95.51
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.48
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	95.46
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.43
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.39
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.34
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.34
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.34
d1duvg2	183	Ornithine transcarbamoylase {Escherichia coli [Tax	95.32
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.26
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	95.24
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	95.21
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.18
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.16
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.13
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	95.12
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	95.1
d1o0sa1	308	Mitochondrial NAD(P)-dependent malic enzyme {Pig r	95.03
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.99
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.91
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.91
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.9
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.87
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	94.82
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.73
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	94.71
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.55
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	94.49
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	94.49
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	94.4
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.3
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.24
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	94.22
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.15
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.99
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.98
d1pj3a1	294	Mitochondrial NAD(P)-dependent malic enzyme {Human	93.97
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.95
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.94
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	93.89
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.83
d1gq2a1	298	Mitochondrial NAD(P)-dependent malic enzyme {Domes	93.82
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.76
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.76
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.75
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.71
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.71
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	93.56
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.54
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.51
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.46
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	93.43
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.43
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	93.4
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	93.39
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.29
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.23
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	93.16
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.12
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.12
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	92.94
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.83
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	92.78
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	92.59
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.41
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.38
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.24
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	92.2
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	92.15
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	91.99
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.98
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.97
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	91.93
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.85
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.78
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	91.46
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.16
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.13
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.1
d1pg5a2	153	Aspartate carbamoyltransferase catalytic subunit {	90.85
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	90.83
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	90.79
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	90.78
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.53
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.22
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	90.16
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.15
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	90.13
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	90.06
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	90.03
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	89.85
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.72
d2h1qa1	251	Hypothetical protein Dhaf_3308 {Desulfitobacterium	89.68
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	89.1
d1otha2	170	Ornithine transcarbamoylase {Human (Homo sapiens)	89.04
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	88.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	88.44
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	88.35
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.04
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	87.82
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	87.26
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	87.23
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	87.01
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.93
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.81
d2at2a2	151	Aspartate carbamoyltransferase catalytic subunit {	86.28
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.2
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	86.02
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	85.91
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	85.84
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	85.66
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	85.37
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	85.24
d1ml4a2	157	Aspartate carbamoyltransferase catalytic subunit {	85.13
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	84.71
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	84.21
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	84.16
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.0
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	83.68
d2b0ja2	242	5,10-methenyltetrahydromethanopterin hydrogenase,	83.0
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	82.92
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	82.3
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	82.2
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	81.86
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	81.82
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	81.59
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	81.34
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	80.92

>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=100.00  E-value=3e-39  Score=274.74  Aligned_cols=171  Identities=40%  Similarity=0.664  Sum_probs=157.9

Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHH
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAII  236 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~  236 (332)
                      |.||++||+++||+++|++|++|++++||||||++|||+||+++|    +|.|+.++++++.|..+++.+.+++++++++
T Consensus         1 T~LDs~R~r~~lA~~l~V~~~~V~~~iI~GeHGds~vp~~S~a~v----~g~~l~~~~~~~~~~~~~~~~~v~~~~~~ii   76 (188)
T d7mdha2           1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKI----DGRPVKEVIKRTKWLEEEFTITVQKRGGALI   76 (188)
T ss_dssp             CHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSSTTCEEECSSCEE----TTEEGGGTCCCHHHHHHHHHHHHHTHHHHHH
T ss_pred             CccHHHHHHHHHHHHHCcCHHHeeEEEEEEcCCCcEeeeeeccEe----eccchhhcccchhhhHHHHHHHHhhhHHHHH
Confidence            789999999999999999999999888899999999999999999    9999999988878888899999999999999


Q ss_pred             HhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          237 KARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       237 ~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                      +.||+++++++|.++++++.+++.+.+...++|++++++|+ ||+|+|+|||+||++ ++|+++++.+++|+++|+++|+
T Consensus        77 ~~kg~s~~~s~A~A~~~~~~ai~~~~~~~~~~s~~v~~~g~~YGi~~~v~~s~Pv~ig~~G~~~iv~~l~L~~~e~~~l~  156 (188)
T d7mdha2          77 QKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIK  156 (188)
T ss_dssp             HHTSSCCHHHHHHHHHHHHHHHHSCCCTTCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHHHH
T ss_pred             HhhcccchhhHHHHHHHHHHHHHcCCCCCceEEEEEEeCCCccCCCCCeEEEEeeEECCCccEEEeCCCCCCHHHHHHHH
Confidence            99999999988889999998877665467889999999995 999999999999997 9999999866999999999999


Q ss_pred             HHHHHHHHHHHHHhhhh
Q 020022          315 LTAEELSEEKALAYSCL  331 (332)
Q Consensus       315 ~s~~~i~~~~~~~~~~~  331 (332)
                      +|+++|+++.+.+.+.|
T Consensus       157 ~S~~eL~~e~~~v~~Ll  173 (188)
T d7mdha2         157 KSEAELLAEKKCVAHLT  173 (188)
T ss_dssp             HHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999988876654

>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=2.3e-37  Score=262.29  Aligned_cols=171  Identities=64%  Similarity=0.949  Sum_probs=153.3

Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh----cccchhHHHHHHHhhH
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQQRG  232 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~----~~~~~~~~~~~v~~~~  232 (332)
                      |.||++||++++|+++|++|++|++++|||+||+++||+||+++|    +|.|+.+++.+    +.|..+++.+.+++++
T Consensus         1 T~LDs~R~r~~la~~l~V~~~~V~~~vI~GeHG~s~vp~~S~a~v----~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   76 (179)
T d5mdha2           1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKV----KLQAKEVGVYEAVKDDSWLKGEFITTVQQRG   76 (179)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTTCEEECTTCEE----ECSSCEEEHHHHHCCHHHHHTHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHCcCHHHcEEEEEEEcCCCcccccchhcee----cCcchhhhhhhccccchhhHHHHHHHHHhcc
Confidence            789999999999999999999999988889999999999999999    99998776543    2355578889999999


Q ss_pred             HHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCC-CCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHH
Q 020022          233 AAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSR  310 (332)
Q Consensus       233 ~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g-~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~  310 (332)
                      +++++.||+++++++|.++++++.+++...++..++|++++++| +||+|+|+|||+||++ ++|++++.+ ++|+++|+
T Consensus        77 ~~i~~~~~~ss~~~~a~a~~~~~~~i~~~~~~~~~~s~~v~~~g~~yGi~~~v~~s~P~~lg~~Gv~~v~~-l~L~~~E~  155 (179)
T d5mdha2          77 AAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEG-LPINDFSR  155 (179)
T ss_dssp             HHHHHHHSSCCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEECTTCSSSCCSSCEEEEEEEEETTEEEECCC-CCCCHHHH
T ss_pred             HhhhhccCcchHHHHHHHHHHHHHHHHhhcccCCceeEEEEccCcccCCccceEEeeeEEEcCCcEEEEeC-CCCCHHHH
Confidence            99999999888888888899988876665446788999999998 7999999999999997 999999987 89999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhC
Q 020022          311 KKLDLTAEELSEEKALAYSCLS  332 (332)
Q Consensus       311 ~~l~~s~~~i~~~~~~~~~~~~  332 (332)
                      ++|++|++.|+++++.+.++|+
T Consensus       156 ~~l~~Sa~~L~~~~~~~~~~l~  177 (179)
T d5mdha2         156 EKMDLTAKELAEEKETAFEFLS  177 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999873

>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.4e-35  Score=247.66  Aligned_cols=169  Identities=51%  Similarity=0.866  Sum_probs=141.6

Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHH
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAI  235 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i  235 (332)
                      +|.||++||++++|++++++|++|++++|||+||+++||+||++++    +|.|+.++..+..+..++ .+....++.++
T Consensus         1 ~T~LDs~R~r~~lA~~l~v~~~~V~~~iI~GeHG~s~vp~~S~~~v----~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~   75 (173)
T d1y7ta2           1 MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEV----DGRPALELVDMEWYEKVF-IPTVAQRGAAI   75 (173)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTTCEEECSSCEE----TTEEGGGTSCHHHHHHTH-HHHHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHHHCcCHHHcEEEEEEEecCccEEeeeeeeeE----cCccHHHhcccccccchh-hhhhhhhHHHH
Confidence            4899999999999999999999999998899999999999999999    999999887665444334 44444455556


Q ss_pred             HHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEecCCcEEEecCCCCCHHHHHHHHH
Q 020022          236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDL  315 (332)
Q Consensus       236 ~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~~~Gv~~~~~~~~l~~~E~~~l~~  315 (332)
                      +..+++++++++|.+++.++.+++.+.++++++|++++++|+||+|+++|+|+||++++|.++++++++|+++|+++|++
T Consensus        76 ~~~~~~~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~v~~~g~YGi~~~~~~s~Pvi~~~gg~~~v~~l~L~~~E~~~l~~  155 (173)
T d1y7ta2          76 IQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEI  155 (173)
T ss_dssp             HHHHSSCCHHHHHHHHHHHHHHHHTBCCTTCCEEEEEECSSGGGCCTTSEEEEEEEEETTEEEECCCCCCCHHHHHHHHH
T ss_pred             HHHhccCchhhHHHHHHHHHHHHhcccCCCCceeeEEEeccccCCccceeEeeeEEEeCCeEEEecCCCCCHHHHHHHHH
Confidence            55555566777777889988876665447899999999999999999999999999877766666569999999999999


Q ss_pred             HHHHHHHHHHHHhh
Q 020022          316 TAEELSEEKALAYS  329 (332)
Q Consensus       316 s~~~i~~~~~~~~~  329 (332)
                      |+++|+++++.+.+
T Consensus       156 s~~~L~~~~e~vk~  169 (173)
T d1y7ta2         156 TAQELLDEMEQVKA  169 (173)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999986643

>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum arcticum [TaxId: 87645]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Aquaspirillum arcticum [TaxId: 87645]

Probab=100.00  E-value=1.5e-34  Score=243.23  Aligned_cols=168  Identities=48%  Similarity=0.814  Sum_probs=149.9

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH
Q 020022          158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK  237 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~  237 (332)
                      .||++||+++||+++|++|++|++++|||+||+++||+||++++    +|.|+.++..+..|..+++.+.+++++..+..
T Consensus         2 ~LD~~R~r~~lA~kl~v~~~~V~~~iI~GehG~s~vp~~S~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (171)
T d1b8pa2           2 RLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQI----DGASVKDMINDDAWNRDTFLPTVGKRGAAIID   77 (171)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEESCEEEBCSSTTCEEECSSCEE----TTEEHHHHHCCHHHHHHTHHHHHHTHHHHHHH
T ss_pred             cchHHHHHHHHHHHHCcCHHHeEEEEEEEcCCCcEEeeeeccee----ecccchhhhhhhcchhhhHHHHHHHHHHHHHH
Confidence            48999999999999999999999988899999999999999999    99999998877666666777777778888888


Q ss_pred             hcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHH
Q 020022          238 ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLT  316 (332)
Q Consensus       238 ~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s  316 (332)
                      .++.+++++++.+++..+.+++.++ .+.++|+|++++|+||+|+++|||+||++ ++|++.+.+ ++|+++|+++|++|
T Consensus        78 ~~~~~~~~~~~~a~~~~~~~~i~~~-~~~~~~~s~~~~g~yg~~~gi~fS~Pv~ig~~gve~v~~-l~L~~~e~~~l~~s  155 (171)
T d1b8pa2          78 ARGVSSAASAANAAIDHIHDWVLGT-AGKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQG-LSIDAFSQERINVT  155 (171)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHCC-TTCCEEEEEECCSGGGCCTTCEEEEEEEEETTEEEECCC-CCCCHHHHHHHHHH
T ss_pred             HHhhhhhhhhhHHHHHHHHHHHhCC-CccceeEEEEeccccccccceEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHH
Confidence            8887777766656777777888887 78999999999999999999999999997 888888876 89999999999999


Q ss_pred             HHHHHHHHHHHhhhh
Q 020022          317 AEELSEEKALAYSCL  331 (332)
Q Consensus       317 ~~~i~~~~~~~~~~~  331 (332)
                      +++|+++++.+...|
T Consensus       156 ~~~L~~e~~~v~~ll  170 (171)
T d1b8pa2         156 LNELLEEQNGVQHLL  170 (171)
T ss_dssp             HHHHHHHHHHHGGGG
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999988765

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=100.00  E-value=4.5e-34  Score=239.89  Aligned_cols=152  Identities=43%  Similarity=0.631  Sum_probs=143.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ++.||+|+||+|+||+++++.|+++++++.+++++++|+|+++.++.+++.++|++|++++....+..+++.+++++++|
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aD  102 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD  102 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCc
Confidence            45799999988999999999999999998878889999999987788899999999998888888888999999999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      +||+++|.++++|++|+|++..|+++++++++.|.++|+++++|+++|||+|++|++++++++++|+++|.+
T Consensus       103 vVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~NPvd~~t~ia~k~a~~ip~~~i~~  174 (175)
T d7mdha1         103 WALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHA  174 (175)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEE
T ss_pred             eEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEecCcHHHHHHHHHHHCCCCCHHHEeC
Confidence            999999999999999999999999999999999999998899999999999999999999889999999866

>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=100.00  E-value=8.7e-34  Score=238.71  Aligned_cols=164  Identities=18%  Similarity=0.174  Sum_probs=143.3

Q ss_pred             EechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhccc-----chhHHHHHHH
Q 020022          155 CLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW-----LNGEFITTVQ  229 (332)
Q Consensus       155 ~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~-----~~~~~~~~v~  229 (332)
                      +||.||++||+++||+++|+++.+|+.+ |||+||++|||+||++++    +|.|+.+++.+..|     ..+++.+.++
T Consensus         1 ~GT~LDs~R~~~~lA~~lgv~~~~V~~~-ViG~Hg~~~vp~~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~i~~~~~   75 (172)
T d1i0za2           1 SGCNLDSARFRYLMAEKLGIHPSSCHGW-ILGEHGDSSVAVWSGVNV----AGVSLQELNPEMGTDNDSENWKEVHKMVV   75 (172)
T ss_dssp             CTTHHHHHHHHHHHHHHHTSCGGGCBCC-EEBCSSTTCEECGGGCEE----TTEEHHHHCTTTTSSSCSSCTHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHhCcCHHHceEE-EEccCCCcccccHhhcee----CCeeHHHhhhhhccchhHHHHHHHHHHhc
Confidence            4899999999999999999999999866 699999999999999999    99999988754322     2467888999


Q ss_pred             hhHHHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHH
Q 020022          230 QRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEF  308 (332)
Q Consensus       230 ~~~~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~  308 (332)
                      +.+.++++.|+++.+.+ |.++++++. ++.++ ++.++|++++++|+||+|+++|||+||++ ++|++++++ ++|+++
T Consensus        76 ~~~~~~~~~~~~s~~a~-a~~~~~~~~-~~~~~-~~~v~~~~~~~~g~YGi~~~i~~s~Pv~lg~~Gv~~v~~-l~L~~~  151 (172)
T d1i0za2          76 ESAYEVIKLKGYTNWAI-GLSVADLIE-SMLKN-LSRIHPVSTMVKGMYGIENEVFLSLPCILNARGLTSVIN-QKLKDD  151 (172)
T ss_dssp             HHHHHHHHHHSSCCHHH-HHHHHHHHH-HHHTT-CCEEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECC-CCCCHH
T ss_pred             cceEEeeecccccchHH-HHHHHHHHH-HHhcC-CCcccccceeccCcCCCcCCEEEEEEEEecCCcEEEEeC-CCCCHH
Confidence            99999999999777654 546777554 56676 89999999999999999889999999997 999999997 899999


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 020022          309 SRKKLDLTAEELSEEKALA  327 (332)
Q Consensus       309 E~~~l~~s~~~i~~~~~~~  327 (332)
                      |+++|++|+++|++.++.+
T Consensus       152 E~~~l~~Sa~~l~~~~~~l  170 (172)
T d1i0za2         152 EVAQLKKSADTLWDIQKDL  170 (172)
T ss_dssp             HHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999887643

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=100.00  E-value=1.1e-33  Score=229.25  Aligned_cols=142  Identities=23%  Similarity=0.300  Sum_probs=127.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      .||+||||+|+||+++++.|+..++++     |++|+|++..++.++|+++||+|... ...+.+++++.+++++|||+|
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~-----el~L~Di~~~~~~~~g~a~Dl~~~~~-~~~~~~i~~~~~~~~~~aDiV   74 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIAD-----EVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGGYEDTAGSDVV   74 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCS-----EEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECCGGGGTTCSEE
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCC-----EEEEEecCCcccccceeecchhhccc-ccCCceEeeCCHHHhhhcCEE
Confidence            499999988999999999999999876     99999987656778899999999653 334445566678999999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      |++||.++++|++|.+++..|+++++++++.|.+++ |+++++++|||+|+|++++++. +|||++|++|
T Consensus        75 vitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~-p~~i~ivvtNPvDvmt~~~~k~-sg~~~~rViG  142 (142)
T d1o6za1          75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSNPVDLLNRHLYEA-GDRSREQVIG  142 (142)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCSSHHHHHHHHHHH-SSSCGGGEEE
T ss_pred             EEecccccccCCchhhHHHHHHHHHHHHHHHHHhcC-CCceEEEecChHHHHHHHHHHH-HCcCcccccC
Confidence            999999999999999999999999999999999999 5799999999999999999998 7999999754

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=100.00  E-value=7e-34  Score=238.58  Aligned_cols=162  Identities=25%  Similarity=0.297  Sum_probs=139.8

Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhc-----ccchhHHHHHHHhh
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD-----AWLNGEFITTVQQR  231 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~-----~~~~~~~~~~v~~~  231 (332)
                      |.||++||++++|+++|++|.+|+++ |||+||++|||+||++++    +|.|+.+++.+.     .+..+++.+++++.
T Consensus         1 T~LDs~R~~~~la~~lgv~~~~V~~~-ViG~Hg~t~vp~~s~~~i----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (169)
T d1y6ja2           1 TVLDSIRFRYLLSEKLGVDVKNVHGY-IIGEHGDSQLPLWSCTHI----AGKNINEYIDDPKCNFTEEDKKKIAEDVKTA   75 (169)
T ss_dssp             THHHHHHHHHHHHTTTTCCTTTEECC-EEBCSSSSCEECCTTCEE----TTBCSCCC-----------CCHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHhCcCHHHceEE-EEccCCCCCccCeeeccc----CchhHHHHHHHhhhhhhHHHHHHHHHHHhhh
Confidence            78999999999999999999999977 589999999999999999    999999887653     22346888889999


Q ss_pred             HHHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHH
Q 020022          232 GAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSR  310 (332)
Q Consensus       232 ~~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~  310 (332)
                      ++++++.|+.+.+.+ |.++++++. ++..| ++.++|++++++|+||++ ++|||+||++ ++|++++++ ++|+++|+
T Consensus        76 ~~~i~~~~~s~~~a~-a~~~~~~~~-~i~~~-~~~~~~~~~~~~g~yg~~-~i~~s~Pv~lg~~Gv~~i~~-l~Ls~~E~  150 (169)
T d1y6ja2          76 GATIIKNKGATYYGI-AVSINTIVE-TLLKN-QNTIRTVGTVINGMYGIE-DVAISLPSIVNSEGVQEVLQ-FNLTPEEE  150 (169)
T ss_dssp             HHHHHHHTSCCCHHH-HHHHHHHHH-HHHHT-CCCEECCEEEECSBTTBC-SEEEECCEEEETTEEEECCC-CCCCHHHH
T ss_pred             hhhhhhhhhhhhhHH-HHHHHHHHH-HhccC-CCCceeeeeeeccccCCc-ccceeeeeEEcCCcEEEEec-CCCCHHHH
Confidence            999999998777654 446777655 46667 899999999999999995 9999999987 999999998 89999999


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 020022          311 KKLDLTAEELSEEKALAY  328 (332)
Q Consensus       311 ~~l~~s~~~i~~~~~~~~  328 (332)
                      ++|++|++.|+++++.+.
T Consensus       151 ~~l~~s~~~lk~~~~~vk  168 (169)
T d1y6ja2         151 EALRFSAEQVKKVLNEVK  168 (169)
T ss_dssp             HHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999999999999998754

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=100.00  E-value=2.5e-33  Score=227.67  Aligned_cols=141  Identities=22%  Similarity=0.370  Sum_probs=125.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |.||+||| +|+||+++++.|+..++++     ||+|+|+++  ++++|+++||+|............++.++++++||+
T Consensus         1 p~Ki~IIG-aG~VG~~~a~~l~~~~l~~-----ElvL~D~~~--~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDv   72 (143)
T d1llda1           1 PTKLAVIG-AGAVGSTLAFAAAQRGIAR-----EIVLEDIAK--ERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADM   72 (143)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCCS-----EEEEECSSH--HHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCc-----EEEEEEecc--ccchhHHHHHHhccccCCCceeecCCCHHHhhCCcE
Confidence            57999999 5999999999999999877     999999984  778999999999865433222333456788999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      ||+++|.+++++++|++++..|+++++++++.|.+++ |++++|++|||+|+||++++++ +|+|++|++|
T Consensus        73 VVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~-p~ai~ivvtNPvDvmt~~~~~~-sg~p~~rViG  141 (143)
T d1llda1          73 VVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVA-PNAIYMLITNPVDIATHVAQKL-TGLPENQIFG  141 (143)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHHHHHHHHHH-HTCCTTSEEE
T ss_pred             EEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhC-CCeEEEEeCCchHHHHHHHHHH-HCCChhhccC
Confidence            9999999999999999999999999999999999999 5799999999999999999998 7999999655

>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=100.00  E-value=8.5e-34  Score=237.89  Aligned_cols=165  Identities=22%  Similarity=0.308  Sum_probs=140.2

Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHH
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAI  235 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i  235 (332)
                      ||.||++||++++|+++|++|.+|+++ |||+||+++||+||++++    +|+|+.++.....+..+++.+.++++++++
T Consensus         2 GT~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~vp~~s~~~i----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (168)
T d1hyea2           2 GTHLDSLRFKVAIAKFFGVHIDEVRTR-IIGEHGDSMVPLLSATSI----GGIPIQKFERFKELPIDEIIEDVKTKGEQI   76 (168)
T ss_dssp             TTHHHHHHHHHHHHHHHTCCGGGEECC-EEECSSTTEEECGGGCEE----TTEEGGGCGGGGGCCHHHHHHHHHHHTTSC
T ss_pred             CchHHHHHHHHHHHHHHCcCHHHeEEE-EEcCCCCccccchhheeE----CCEecccccccchhhhhhHHHHHhhhHHHH
Confidence            799999999999999999999999977 589999999999999999    999999887666555578888888888889


Q ss_pred             HHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       236 ~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                      ++.|+.+++.+++ +++.++.. +..+ .+.++++++.+.|+|+.++|+|||+||++ ++|++++++ ++|+++|+++|+
T Consensus        77 ~~~k~~~~~~~a~-~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~v~~s~Pv~lg~~Gv~~i~~-l~Ls~~E~~~l~  152 (168)
T d1hyea2          77 IRLKGGSEFGPAA-AILNVVRC-IVNN-EKRLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVS-IELDKDEIIAFR  152 (168)
T ss_dssp             CC------CCHHH-HHHHHHHH-HHTT-CCEEEEEEEEEESSSSSCEEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHH
T ss_pred             HHhccCccccchh-hhhHHHHh-hhcc-CCCeEEEEEEEecccCCcCCEEEeeceEEcCCcEEEEec-CCCCHHHHHHHH
Confidence            9888877765543 66776665 5555 78899999999999877799999999997 999999998 899999999999


Q ss_pred             HHHHHHHHHHHHHhh
Q 020022          315 LTAEELSEEKALAYS  329 (332)
Q Consensus       315 ~s~~~i~~~~~~~~~  329 (332)
                      +|++.|++.++.+.+
T Consensus       153 ~Sa~~lk~~~~~~k~  167 (168)
T d1hyea2         153 KSAEIIKKYCEEVKN  167 (168)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999998765

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.7e-33  Score=231.23  Aligned_cols=153  Identities=56%  Similarity=0.801  Sum_probs=140.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      =.+|+||+||||+|+||+++++.|++.++++..+.+.+.|+|.+.+++++++..+|++++..+....+..+++.+++++|
T Consensus         1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (154)
T d1y7ta1           1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKD   80 (154)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhccc
Confidence            03578999999889999999999999999886666678899988878888999999999887777888899999999999


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEE
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT  154 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~  154 (332)
                      ||+||+++|.++++|++|++++..|+++++++++.|.++|+|+++++++|||+|++|++++++++|+|++||.
T Consensus        81 advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsNPvDv~t~~a~k~asg~p~~rvi  153 (154)
T d1y7ta1          81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFT  153 (154)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEE
T ss_pred             ccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecCcHHHHHHHHHHHcCCCcHHhcc
Confidence            9999999999999999999999999999999999999999888999999999999999999987899999975

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1e-33  Score=233.86  Aligned_cols=152  Identities=53%  Similarity=0.858  Sum_probs=139.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +|+||+||||+|+||+++++.|+.+++++.+.+++++|+|+++.++++++..+|+.++.++....+..+++.++++++||
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   81 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD   81 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCce
Confidence            68899999988999999999999999988777789999999987788888888888887777778888889999999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      +||+++|.+++++++|++++..|+++++++++.|.++|++++++|++|||+|+||++++++++|+|++||.+
T Consensus        82 vVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvsNPvD~mt~v~~k~s~g~P~~~v~~  153 (154)
T d5mdha1          82 VAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSC  153 (154)
T ss_dssp             EEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEE
T ss_pred             EEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEecCcHHHHHHHHHHHcCCCCHHHEeC
Confidence            999999999999999999999999999999999999997777788999999999999999966999999865

>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=1.7e-33  Score=230.05  Aligned_cols=147  Identities=17%  Similarity=0.218  Sum_probs=128.0

Q ss_pred             echHHHHHHHHHHHHHcCCCCCCe-eeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHH
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDV-KNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAA  234 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v-~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~  234 (332)
                      ||.|||+||++.|++....   ++ ++++ +||||++|||+||.+++    +|.+.          .+++.+.+++++++
T Consensus         1 Gt~LDsaR~r~~l~~~~~~---~v~~a~V-iGeHGds~vp~~S~~~i----~g~~~----------~~~i~~~v~~~g~e   62 (152)
T d1ojua2           1 GNQLDSQRLKERLYNAGAR---NIRRAWI-IGEHGDSMFVAKSLADF----DGEVD----------WEAVENDVRFVAAE   62 (152)
T ss_dssp             SHHHHHHHHHHHHHHTTCB---SCCCCCE-EBCSSTTCEECGGGCCC----BSCCC----------HHHHHHHHHTTHHH
T ss_pred             CCccHHHHHHHHHHccCCC---CcceeEE-EecCCCccccccccccc----cCccc----------hhHhHHHHHHHHHH
Confidence            6899999999999876554   44 6774 89999999999999999    77553          25788999999999


Q ss_pred             HHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          235 IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       235 i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                      |+++||++.| ++|.++++++. +|+.| ++.++|+|++++|+||+ +|+|+|+||++ ++|++ +++ ++|+++|+++|
T Consensus        63 Ii~~kG~t~~-gia~a~~~iv~-aIl~d-~~~v~pvs~~l~geyG~-~dv~lsvP~vig~~Gve-i~~-l~L~~~E~~~l  136 (152)
T d1ojua2          63 VIKRKGATIF-GPAVAIYRMVK-AVVED-TGEIIPTSMILQGEYGI-ENVAVGVPAKLGKNGAE-VAD-IKLSDEEIEKL  136 (152)
T ss_dssp             HHHHHSSCCH-HHHHHHHHHHH-HHHTT-CCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEEE-ECC-CCCCHHHHHHH
T ss_pred             hhhhccceec-cHHHHHHHHHH-HHHhc-CCCceeeeEEeccccCC-CCEEEEeEEEECCCceE-EEc-CCCCHHHHHHH
Confidence            9999998765 45668888765 58888 99999999999999999 79999999987 99985 887 89999999999


Q ss_pred             HHHHHHHHHHHHH
Q 020022          314 DLTAEELSEEKAL  326 (332)
Q Consensus       314 ~~s~~~i~~~~~~  326 (332)
                      ++|++.|++.++.
T Consensus       137 ~~Sa~~ik~~i~~  149 (152)
T d1ojua2         137 RNSAKILRERLEE  149 (152)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998874

>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=100.00  E-value=3.4e-33  Score=234.61  Aligned_cols=160  Identities=23%  Similarity=0.249  Sum_probs=141.0

Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhc------ccchhHHHHHHHh
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD------AWLNGEFITTVQQ  230 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~------~~~~~~~~~~v~~  230 (332)
                      |.||++||++++|+++|+++++|+++ |||+||++|||+||++++    +|.|+.+++...      .+..+++.+.+++
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~vp~~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~i~~~v~~   75 (170)
T d1llda2           1 TNLDSARLRFLIAQQTGVNVKNVHAY-IAGEHGDSEVPLWESATI----GGVPMSDWTPLPGHDPLDADKREEIHQEVKN   75 (170)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECC-EEBSSSTTCEECTTSCEE----TTEEGGGCCCCTTCCCCCHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEE-EEcCCCCCcccchhhccc----CCCchhhhcccccccccchhhHHHHHHHHhh
Confidence            78999999999999999999999977 589999999999999999    999999876432      2345688899999


Q ss_pred             hHHHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHH
Q 020022          231 RGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFS  309 (332)
Q Consensus       231 ~~~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E  309 (332)
                      ++++|++.||++++.+ |.+++.++.+ +..+ ...+++++++++|+||. +++|||+||++ ++|++++++ ++|+++|
T Consensus        76 ~g~~i~~~kg~t~~~~-a~~~~~~~~~-i~~~-~~~~~~~~~~~~~~~g~-~~i~~s~P~~lg~~Gv~~i~~-l~L~~~E  150 (170)
T d1llda2          76 AAYKIINGKGATNYAI-GMSGVDIIEA-VLHD-TNRILPVSSMLKDFHGI-SDICMSVPTLLNRQGVNNTIN-TPVSDKE  150 (170)
T ss_dssp             HHHHHHTSCCSCCHHH-HHHHHHHHHH-HHTT-CCEEEEEEEECSSBTTB-CSSEEEEEEEEETTEEECCSC-CCCCHHH
T ss_pred             hhhHHHhhhccchhhh-HHHHHHHHHH-HHcC-CCceeeeeccccCccCC-CCeeEeeccEEcCCeeEEEec-CCCCHHH
Confidence            9999999999877655 4577776665 5566 88999999999999998 79999999987 999999997 8999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 020022          310 RKKLDLTAEELSEEKAL  326 (332)
Q Consensus       310 ~~~l~~s~~~i~~~~~~  326 (332)
                      +++|++|++.|++.++.
T Consensus       151 ~~~l~~sa~~lk~~~~~  167 (170)
T d1llda2         151 LAALKRSAETLKETAAQ  167 (170)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999988753

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=1.9e-33  Score=230.35  Aligned_cols=145  Identities=21%  Similarity=0.313  Sum_probs=130.6

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC   79 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al   79 (332)
                      |++ ...||+||| +|+||+++++.|++.++.+     ||+|+|+++  ++++|+++||+|+.......+.+.++.++++
T Consensus         1 m~~~~~~KI~IiG-aG~vG~~~a~~l~~~~l~~-----el~L~Di~~--~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l   72 (148)
T d1ldna1           1 MKNNGGARVVVIG-AGFVGASYVFALMNQGIAD-----EIVLIDANE--SKAIGDAMDFNHGKVFAPKPVDIWHGDYDDC   72 (148)
T ss_dssp             CTTTTSCEEEEEC-CSHHHHHHHHHHHHHTCCS-----EEEEECSSH--HHHHHHHHHHHHHTTSSSSCCEEEECCGGGT
T ss_pred             CCCCCCCeEEEEC-cCHHHHHHHHHHHhcCCCc-----eEEEEeecc--ccccchhccHhhCccccCCCeEEEECCHHHh
Confidence            655 457999999 5999999999999998876     999999984  7889999999998765555666666788999


Q ss_pred             CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      +|||+||+++|.+++++++|.+++.+|+++++++++.|.++| |++++|++|||+|++|++++++ +|+|++|++|
T Consensus        73 ~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~~ivvtNPvd~~t~~~~k~-sg~p~~rViG  146 (148)
T d1ldna1          73 RDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNPVDILTYATWKF-SGLPHERVIG  146 (148)
T ss_dssp             TTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSHHHHHHHHHHH-HTCCGGGEEE
T ss_pred             ccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhC-CCceEEEecCccHHHHHHHHHH-HCcChhheec
Confidence            999999999999999999999999999999999999999999 5799999999999999999999 7999999655

>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=100.00  E-value=1.1e-32  Score=231.81  Aligned_cols=166  Identities=22%  Similarity=0.321  Sum_probs=145.8

Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccch---hHHHHHHHhhHH
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLN---GEFITTVQQRGA  233 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~---~~~~~~v~~~~~  233 (332)
                      |.||++||++++|+++|++|.+|+.+ |||+||+++||+||++++    +|.|+.+++.+..+..   .++.+.++.+++
T Consensus         1 T~LD~~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~t~vp~~s~~~i----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (171)
T d1ez4a2           1 TSLDSSRLRVALGKQFNVDPRSVDAY-IMGEHGDSEFAAYSTATI----GTRPVRDVAKEQGVSDDDLAKLEDGVRNKAY   75 (171)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECC-EESSSSSSCEECGGGCEE----TTEEHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEE-EEccCCCccccccccccc----CCccceeecccccccchhhhhheeehhhhhH
Confidence            78999999999999999999999877 589999999999999999    9999998876554432   456678888899


Q ss_pred             HHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHH
Q 020022          234 AIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKK  312 (332)
Q Consensus       234 ~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~  312 (332)
                      +++++||++.+. +|.++.+++ .++.++ .+.++|++++++|+||+ +++|||+||++ ++|++++++ ++|+++|+++
T Consensus        76 ~i~~~k~s~~~a-~a~~~~~~~-~~i~~~-~~~~~~~~~~~~~~~g~-~~~~~S~Pv~lg~~Gv~~v~~-l~Ls~~E~~~  150 (171)
T d1ez4a2          76 DIINLKGATFYG-IGTALMRIS-KAILRD-ENAVLPVGAYMDGQYGL-NDIYIGTPAIIGGTGLKQIIE-SPLSADELKK  150 (171)
T ss_dssp             HHHHHHSCCCHH-HHHHHHHHH-HHHHTT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHH
T ss_pred             HHHHhhhhHhHH-HHHHHHHHH-HHHhcc-CCceEEEEEeeccccCc-cceeeeEEEEEcCCcEEEEeC-CCCCHHHHHH
Confidence            999999966654 455778865 467777 89999999999999998 79999999997 999999998 8999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhC
Q 020022          313 LDLTAEELSEEKALAYSCLS  332 (332)
Q Consensus       313 l~~s~~~i~~~~~~~~~~~~  332 (332)
                      |++|++.|+++++.+...|+
T Consensus       151 l~~s~~~l~~~i~~~l~~l~  170 (171)
T d1ez4a2         151 MQDSAATLKKVLNDGLAELE  170 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHhc
Confidence            99999999999998887764

>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=100.00  E-value=1.3e-32  Score=229.46  Aligned_cols=162  Identities=18%  Similarity=0.206  Sum_probs=139.7

Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHH
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAI  235 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i  235 (332)
                      ||.||++||++++|+++|++|++|+++ |||+||+++||+||++++    +|.|+.+++.++.|..+++.+.++++++++
T Consensus         1 GT~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~vp~~s~~~v----~g~~~~~~~~~~~~~~~~i~~~v~~~~~~i   75 (163)
T d1hyha2           1 GTLLDTARMQRAVGEAFDLDPRSVSGY-NLGEHGNSQFVAWSTVRV----MGQPIVTLADAGDIDLAAIEEEARKGGFTV   75 (163)
T ss_dssp             TTHHHHHHHHHHHHHHHTCCGGGCBCC-EEBCTTTTCEECTTTCEE----TTEEGGGC-----CCHHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHhCcCHHHeEEE-EEcCCCCcCccceecccc----CCchHHHHhccccchHHHHHHHHhhhHHHH
Confidence            689999999999999999999999977 589999999999999999    999999988877787889999999999999


Q ss_pred             HHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       236 ~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                      ++.||++++.. +.++..++. ++..+ ...+.+++.+..+     +++|||+||++ ++|++++++ ++|+++|+++|+
T Consensus        76 ~~~kg~~~~~~-a~~~~~~~~-~~~~~-~~~~~~~s~~~~~-----~~~~~s~Pv~ig~~Gv~~v~~-l~Ls~~E~~~l~  146 (163)
T d1hyha2          76 LNGKGYTSYGV-ATSAIRIAK-AVMAD-AHAELVVSNRRDD-----MGMYLSYPAIIGRDGVLAETT-LDLTTDEQEKLL  146 (163)
T ss_dssp             HHHHSSCCHHH-HHHHHHHHH-HHHTT-CCEEEEEEEECTT-----TCSEEEEEEEEETTEEEEECC-CCCCHHHHHHHH
T ss_pred             HHHHHhHHHhH-HHHhhHHHH-HhcCC-ccceeeeceecCC-----cceEEEeEEEEcCCeEEEEec-CCCCHHHHHHHH
Confidence            99999877654 456777655 46666 7888888877543     57899999987 999999998 999999999999


Q ss_pred             HHHHHHHHHHHHHhhhh
Q 020022          315 LTAEELSEEKALAYSCL  331 (332)
Q Consensus       315 ~s~~~i~~~~~~~~~~~  331 (332)
                      +|++.|+++++.+.+.|
T Consensus       147 ~s~~~l~~~~~~~~~~l  163 (163)
T d1hyha2         147 QSRDYIQQRFDEIVDTL  163 (163)
T ss_dssp             HHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhhC
Confidence            99999999999988764

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=9.3e-33  Score=224.32  Aligned_cols=139  Identities=27%  Similarity=0.385  Sum_probs=125.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~~~~~al~~aD   83 (332)
                      |||+||| +|+||+++++.|+..++++     ||+|+|++  +++++|+++||+|......  .++..++ +++++++||
T Consensus         1 MKI~IIG-aG~VG~~~a~~l~~~~~~~-----elvL~Di~--~~~~~g~alDl~~~~~~~~~~~~i~~~~-d~~~~~~ad   71 (142)
T d1ojua1           1 MKLGFVG-AGRVGSTSAFTCLLNLDVD-----EIALVDIA--EDLAVGEAMDLAHAAAGIDKYPKIVGGA-DYSLLKGSE   71 (142)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHSCCS-----EEEEECSS--HHHHHHHHHHHHHHHHTTTCCCEEEEES-CGGGGTTCS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCcCc-----eEEEEecc--cchhhHHHHHHhhhccccCCCCccccCC-CHHHhcccc
Confidence            6999999 5999999999999998877     99999998  4788999999999875433  3444444 478999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      +||+++|.++++|++|.+++.+|+++++++++.|.++| |+++++++|||+|++|++++++ +|+|++|++|
T Consensus        72 iVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-p~aivivvtNPvD~~t~~~~k~-sg~p~~rViG  141 (142)
T d1ojua1          72 IIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMDVMTYIMWKE-SGKPRNEVFG  141 (142)
T ss_dssp             EEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHHHHHHHHHHH-SCCCTTSEEE
T ss_pred             EEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhC-CCcEEEEecCChHHHHHHHHHH-HCCChhcEec
Confidence            99999999999999999999999999999999999999 5799999999999999999999 7999999766

>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=100.00  E-value=6.1e-33  Score=231.30  Aligned_cols=158  Identities=22%  Similarity=0.326  Sum_probs=138.4

Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHH
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAII  236 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~  236 (332)
                      ++||++||++++|+++|++|.+|+++ |||+||+++||+||++++    +|.|+.+++.++.  .+++.+.+++++++++
T Consensus         2 g~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~s~vp~~s~~~i----~g~~~~~~~~~~~--~~~~~~~v~~~g~~ii   74 (163)
T d1guza2           2 GVLDAARFRSFIAMELGVSMQDINAC-VLGGHGDAMVPVVKYTTV----AGIPISDLLPAET--IDKLVERTRNGGAEIV   74 (163)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGEECC-EEECSGGGEEECGGGCEE----TTEEHHHHSCHHH--HHHHHHHHHTHHHHHH
T ss_pred             cccHHHHHHHHHHHHHCcCHHHeEEE-EEcCCCCCcccCHhhccc----CCccccccCCHHH--HHHHHHHHHHHHHHHH
Confidence            37999999999999999999999987 589999999999999999    9999998875443  3689999999999998


Q ss_pred             Hh--cCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          237 KA--RKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       237 ~~--kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                      +.  ||++. ++++.++.++ ..++.++ ++.++|++++++|+||+ +++|||+||++ ++|++++++ ++|+++|+++|
T Consensus        75 ~~~~kgsa~-~a~~~~~~~~-~~~i~~~-~~~~~~~~~~~~~~~g~-~~~~~s~P~~lg~~Gv~~i~~-l~Ls~~E~~~l  149 (163)
T d1guza2          75 EHLKQGSAF-YAPASSVVEM-VESIVLD-RKRVLPCAVGLEGQYGI-DKTFVGVPVKLGRNGVEQIYE-INLDQADLDLL  149 (163)
T ss_dssp             HHHSSSCCC-HHHHHHHHHH-HHHHHTT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHH
T ss_pred             HHhcCCCcc-hhHHHHHHHH-HHheecc-CCCEEEEeeeeccccCC-CCcEEEEeeEEcCCeeEEEec-CCCCHHHHHHH
Confidence            74  55555 4455566764 4568887 89999999999999999 69999999987 999999998 89999999999


Q ss_pred             HHHHHHHHHHHHH
Q 020022          314 DLTAEELSEEKAL  326 (332)
Q Consensus       314 ~~s~~~i~~~~~~  326 (332)
                      ++|++.|++.++.
T Consensus       150 ~~sa~~l~~~i~~  162 (163)
T d1guza2         150 QKSAKIVDENCKM  162 (163)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998764

>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=100.00  E-value=8.1e-33  Score=230.83  Aligned_cols=158  Identities=20%  Similarity=0.318  Sum_probs=138.9

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH
Q 020022          158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK  237 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~  237 (332)
                      +||++||++++|+++|++|.+|++++ ||+||+++||+||++++    +|.|+.+++.+.  ..+++.+.+++++++|++
T Consensus         3 ~LD~~R~~~~lA~~l~v~~~~V~~~V-iG~Hg~~~v~~~s~~~i----~g~~~~~~~~~~--~~~~~~~~v~~~g~~ii~   75 (164)
T d1uxja2           3 VLDAARYRTFIAMEAGVSVKDVQAML-MGGHGDEMVPLPRFSTI----SGIPVSEFIAPD--RLAQIVERTRKGGGEIVN   75 (164)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEEECC-EECSGGGEECCGGGEEE----TTEEGGGTSCHH--HHHHHHHHHHTHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEEE-EcCCCCceeeeeeeeec----CCCchhhccchh--hHHHHHHHHHHHHHHHHH
Confidence            69999999999999999999999775 89999999999999999    999998876544  346899999999999976


Q ss_pred             --hcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          238 --ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       238 --~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                        +||. ++++++.++.++ .+|+.++ ++.++|++++++|+||+ +++|||+||++ ++|++++++ ++|+++|+++|+
T Consensus        76 ~~~kgs-~~~a~a~a~~~i-~~~i~~~-~~~~~~~~~~~~g~ygi-~~~~~s~P~~ig~~Gv~~v~~-l~L~~~E~~~l~  150 (164)
T d1uxja2          76 LLKTGS-AYYAPAAATAQM-VEAVLKD-KKRVMPVAAYLTGQYGL-NDIYFGVPVILGAGGVEKILE-LPLNEEEMALLN  150 (164)
T ss_dssp             HHSSSC-CCHHHHHHHHHH-HHHHHTT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHH
T ss_pred             HHhcCc-ccchHHHHHHHH-HHHHhCC-CCceeeeeeeeccccCC-CCceEEECeEEeCCeeEEEeC-CCCCHHHHHHHH
Confidence              4554 445556567775 4578887 89999999999999999 69999999986 999999998 899999999999


Q ss_pred             HHHHHHHHHHHHH
Q 020022          315 LTAEELSEEKALA  327 (332)
Q Consensus       315 ~s~~~i~~~~~~~  327 (332)
                      +|++.|+++++.+
T Consensus       151 ~s~~~lk~~i~~l  163 (164)
T d1uxja2         151 ASAKAVRATLDTL  163 (164)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999999864

>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=100.00  E-value=1.6e-32  Score=231.33  Aligned_cols=164  Identities=20%  Similarity=0.335  Sum_probs=135.7

Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccch---hHHHHHHHhhH
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLN---GEFITTVQQRG  232 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~---~~~~~~v~~~~  232 (332)
                      ||+||++||++++|+++|++|++|+.+ ||||||++|||+||++++    +|.|+.+++.+..|..   .+..+..+.++
T Consensus         1 ~c~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~t~vp~~S~~~i----~g~~l~~~~~~~~~~~~~~~~~~~~~~~~g   75 (174)
T d1pzga2           1 ACMLDSGRFRRYVADALSVSPRDVQAT-VIGTHGDCMVPLVRYITV----NGYPIQKFIKDGVVTEKQLEEIAEHTKVSG   75 (174)
T ss_dssp             CHHHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEE----TTEEHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHhCcCHHHcEEE-EEccCCCccccceeeeeE----CCEechhhccccchhhhhhhhhhheeeccc
Confidence            699999999999999999999999877 699999999999999999    9999999876554432   23344445556


Q ss_pred             HHHHH--hcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHH
Q 020022          233 AAIIK--ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFS  309 (332)
Q Consensus       233 ~~i~~--~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E  309 (332)
                      .+++.  +||.+.+ +++.++++++ .++.++ ++.++|+++.++|+||++ ++|||+||++ ++|++++++ ++|+++|
T Consensus        76 ~~~~~~~~~gst~~-~~a~a~~~~~-~~i~~~-~~~~~~~s~~~~~~yGi~-~v~~s~Pv~ig~~Gi~~v~~-l~l~~~E  150 (174)
T d1pzga2          76 GEIVRFLGQGSAYY-APAASAVAMA-TSFLND-EKRVIPCSVYCNGEYGLK-DMFIGLPAVIGGAGIERVIE-LELNEEE  150 (174)
T ss_dssp             HHHHHHHSSSCCCH-HHHHHHHHHH-HHHHTT-CCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHH
T ss_pred             eeEeeeecccchhh-hhHHHHHHHH-Hhhccc-CCceEEeeeccccccCCC-CceeeeeeEEcCCcEEEEeC-CCCCHHH
Confidence            66654  5554444 4555677754 567777 899999999999999994 8999999987 999999997 8999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhh
Q 020022          310 RKKLDLTAEELSEEKALAYS  329 (332)
Q Consensus       310 ~~~l~~s~~~i~~~~~~~~~  329 (332)
                      +++|++|++.|+++.+.+.+
T Consensus       151 ~~~l~~s~~~l~~~~~~v~~  170 (174)
T d1pzga2         151 KKQFQKSVDDVMALNKAVAA  170 (174)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999999999998876554

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.1e-32  Score=223.68  Aligned_cols=139  Identities=16%  Similarity=0.330  Sum_probs=125.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.||+++++.|+..++.+     ||+|+|+++  ++++++++|+.|... +..+....++++++++|||+|
T Consensus         1 mKI~IIG-aG~VG~~~a~~l~~~~l~~-----el~L~Di~~--~~~~g~~~Dl~~~~~-~~~~~~~~~~~~~~~~~adiv   71 (140)
T d1a5za1           1 MKIGIVG-LGRVGSSTAFALLMKGFAR-----EMVLIDVDK--KRAEGDALDLIHGTP-FTRRANIYAGDYADLKGSDVV   71 (140)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCS-----EEEEECSSH--HHHHHHHHHHHHHGG-GSCCCEEEECCGGGGTTCSEE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCC-----EEEEEeccc--ccccchhcccccccc-ccccccccCCcHHHhcCCCEE
Confidence            6999999 5999999999999998876     999999984  789999999999763 334445566778999999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      |+++|.++++|++|.+++.+|+++++++++.|.++| |+++++++|||+|+||+++++. +|+|++|++|
T Consensus        72 vitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~-p~aivivvtNPvd~~t~~~~k~-sg~p~~rViG  139 (140)
T d1a5za1          72 IVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDVLTYFFLKE-SGMDPRKVFG  139 (140)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHH-HTCCTTTEEE
T ss_pred             EEecccccCCCcchhhhhccccchHHHHHHHHHhcC-CCcEEEEeCCcHHHHHHHHHHH-HCcCccceeC
Confidence            999999999999999999999999999999999999 6899999999999999999998 7999999754

>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.6e-32  Score=229.61  Aligned_cols=164  Identities=20%  Similarity=0.244  Sum_probs=143.4

Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhccc----chhHHHHHHHhh
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW----LNGEFITTVQQR  231 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~----~~~~~~~~v~~~  231 (332)
                      ||.||++||++++|+++|++|.+|+++ |||+||+++||+||++++    +|.|+.+++....+    ..+++.+.++++
T Consensus         1 GT~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~t~vp~~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (172)
T d1a5za2           1 GTVLDTARLRTLIAQHCGFSPRSVHVY-VIGEHGDSEVPVWSGAMI----GGIPLQNMCQVCQKCDSKILENFAEKTKRA   75 (172)
T ss_dssp             TTHHHHHHHHHHHHHHHTCCGGGEECC-EEBCSSTTCEECGGGCEE----TTEEHHHHHTTSSSCCHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHCcCHHHeEEE-EEecCCCCcccchhhccc----CCcchhhhhhccccccHHHhhhhHHHHhcc
Confidence            699999999999999999999999877 589999999999999999    99999988764322    235677888889


Q ss_pred             HHHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHH
Q 020022          232 GAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSR  310 (332)
Q Consensus       232 ~~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~  310 (332)
                      ++++++.|+++.+.++ .+++.++.+ +..+ .+.+++++++.+|+||. +++|||+||++ ++|++++++ ++|+++|+
T Consensus        76 ~~~i~~~~~~~~~~~a-~a~~~~~~~-~~~~-~~~~~~~~~~~~g~~~~-~~v~~s~P~~lg~~Gv~~v~~-l~Ls~~E~  150 (172)
T d1a5za2          76 AYEIIERKGATHYAIA-LAVADIVES-IFFD-EKRVLTLSVYLEDYLGV-KDLCISVPVTLGKHGVERILE-LNLNEEEL  150 (172)
T ss_dssp             HHHHHHHHSCCCHHHH-HHHHHHHHH-HHTT-CCEEEEEEEEESSBTTB-CSEEEEEEEEEETTEEEEECC-CCCCHHHH
T ss_pred             ceeEeeccccchhhHH-HHHHHHHHH-HHhh-cccceeeeccccccccc-CCeeEeeeEEEcCCceEEEeC-CCCCHHHH
Confidence            9999999997777654 477887765 5556 79999999999999998 79999999987 999999998 89999999


Q ss_pred             HHHHHHHHHHHHHHHHHhh
Q 020022          311 KKLDLTAEELSEEKALAYS  329 (332)
Q Consensus       311 ~~l~~s~~~i~~~~~~~~~  329 (332)
                      ++|++|++.|++.++.+..
T Consensus       151 ~~l~~sa~~lk~~i~~l~~  169 (172)
T d1a5za2         151 EAFRKSASILKNAINEITA  169 (172)
T ss_dssp             HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            9999999999999987654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=100.00  E-value=1.7e-32  Score=223.28  Aligned_cols=142  Identities=19%  Similarity=0.339  Sum_probs=124.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEe-eCChhhhcCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVA-TTDAVEACTGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~-~~~~~~al~~a   82 (332)
                      |||+||||+|+||+++++.|+..++++     |++|+|++++.++++|+++|++|+.....  .++.. .++.+++++||
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~-----el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~a   75 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMK-----DLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDES   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCC-----EEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCccc-----ccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccc
Confidence            699999977999999999999998877     99999998766678899999999765443  33433 35678999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      |+||++||.++++|++|.|++..|+++++++++.|.++| |.+ ++++|||+|+|++++++. +|+|++|++|
T Consensus        76 DvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~-~~~-iivVtNPvD~mt~~~~k~-sg~p~~rViG  145 (145)
T d1hyea1          76 DVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTK-IFVITNPVDVMTYKALVD-SKFERNQVFG  145 (145)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCE-EEECSSSHHHHHHHHHHH-HCCCTTSEEE
T ss_pred             eEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccC-CCe-EEEEcCchHHHHHHHHHH-HCcCcccccC
Confidence            999999999999999999999999999999999999998 456 457899999999999998 7999999754

>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish (Squalus acanthias) [TaxId: 7797]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Dogfish (Squalus acanthias) [TaxId: 7797]

Probab=100.00  E-value=2.8e-32  Score=228.79  Aligned_cols=162  Identities=16%  Similarity=0.152  Sum_probs=137.8

Q ss_pred             EechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcc--cchhHHHHHHHhhH
Q 020022          155 CLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDA--WLNGEFITTVQQRG  232 (332)
Q Consensus       155 ~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~--~~~~~~~~~v~~~~  232 (332)
                      +||.||++||+++||+++|++|.+|+++ |||+||+++||+||++++    ++.|+.++...+.  +...++....+.++
T Consensus         1 sGT~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~v~~~s~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (169)
T d1ldma2           1 SGCNLDSARFRYLMGERLGVHSCSCHGW-VIGEHGDSVPSVWSGMNV----ASIKLHPLDGTNKDKQDWKKLHKDVVDSA   75 (169)
T ss_dssp             CTTHHHHHHHHHHHHHHHTSCGGGCBCC-BCBCSSTTCCBCGGGCEE----TTEESHHHHSSTTTTTTTTHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHCcCHHHeEEE-EEcCCCccchhhhhhccc----CCcchHHhhcccchhhhcceeEEEecCce
Confidence            4899999999999999999999999977 589999999999999999    9999988764322  22345666677778


Q ss_pred             HHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHH
Q 020022          233 AAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRK  311 (332)
Q Consensus       233 ~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~  311 (332)
                      .++...++.+.+ ++|.++++++. ++..+ ++.++|++++++|+||+++++|||+||++ ++|++++++ ++|+++|++
T Consensus        76 ~~~~~~~~s~~~-a~a~~~~~~~~-~~~~~-~~~~~~~~~~~~g~ygi~~~i~~s~Pv~lg~~Gv~~v~~-l~L~~~E~~  151 (169)
T d1ldma2          76 YEVIKLKGYTSW-AIGLSVADLAE-TIMKN-LCRVHPVSTMVKDFYGIKDNVFLSLPCVLNDHGISNIVK-MKLKPNEEQ  151 (169)
T ss_dssp             HHHHHHHSSCCH-HHHHHHHHHHH-HHHTT-CCEEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECC-CCCCHHHHH
T ss_pred             EEEeccccchhh-HHHHHHhhhhh-eecCC-CCceeeeeeecccccCCcCCceEEeeEEEcCCcEEEEec-CCCCHHHHH
Confidence            888888886555 44556777554 57777 89999999999999999889999999997 999999998 899999999


Q ss_pred             HHHHHHHHHHHHHH
Q 020022          312 KLDLTAEELSEEKA  325 (332)
Q Consensus       312 ~l~~s~~~i~~~~~  325 (332)
                      +|++|++.|++.++
T Consensus       152 ~l~~s~~~l~~~~k  165 (169)
T d1ldma2         152 QLQKSATTLWDIQK  165 (169)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999986554

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=100.00  E-value=2.8e-32  Score=224.96  Aligned_cols=142  Identities=21%  Similarity=0.407  Sum_probs=128.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +..||+||| +|+||+++++.|+..++++     ||+|+|++  +++++|+++||+|.............+.++++++||
T Consensus        19 ~~~KV~IIG-aG~VG~~~A~~l~~~~l~~-----ElvLiD~~--~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~ad   90 (160)
T d1i0za1          19 PNNKITVVG-VGQVGMACAISILGKSLAD-----ELALVDVL--EDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSK   90 (160)
T ss_dssp             CSSEEEEEC-CSHHHHHHHHHHHHTTCCS-----EEEEECSC--HHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHhcCCCc-----EEEEEEec--cchhHHHHHHHhccccccCCCeEEeccchhhccccc
Confidence            346999999 5999999999999999887     99999998  478899999999987544444555667789999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      +||++||.++++|++|++++..|+++++++++.|.+++ |++++|++|||+|+||++++++ +|+|++|++|
T Consensus        91 iVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~-p~aiiivvtNPvDv~t~~~~k~-sglp~~rViG  160 (160)
T d1i0za1          91 IVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYS-PDCIIIVVSNPVDILTYVTWKL-SGLPKHRVIG  160 (160)
T ss_dssp             EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHH-HCCCGGGEEE
T ss_pred             EEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchHHHHHHHHHH-HCcCcccccC
Confidence            99999999999999999999999999999999999999 5799999999999999999999 7999999755

>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.98  E-value=3.5e-32  Score=227.22  Aligned_cols=159  Identities=22%  Similarity=0.245  Sum_probs=139.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccch---hHHHHHHHhhHHH
Q 020022          158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLN---GEFITTVQQRGAA  234 (332)
Q Consensus       158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~---~~~~~~v~~~~~~  234 (332)
                      +||+.||++++|+++|++|++|+.+ |||+||+++||+||++++    +|.|+.+......|..   .++.+.+++++++
T Consensus         2 ~LD~~R~~~~la~~lgv~~~~V~~~-ViG~Hg~~~vp~~s~~~i----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (165)
T d1t2da2           2 VLDTSRLKYYISQKLNVCPRDVNAH-IVGAHGNKMVLLKRYITV----GGIPLQEFINNKLISDAELEAIFDRTVNTALE   76 (165)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEECGGGCEE----TTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHH
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEE-EEcCCCCCcccceeeccc----CCcchhhhcccchhhhhhhhhhhhhhhhhhHH
Confidence            6999999999999999999999977 589999999999999999    9999998876544432   3567788888999


Q ss_pred             HHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022          235 IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL  313 (332)
Q Consensus       235 i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l  313 (332)
                      +++.||.+++.+ +.+++.++. ++..+ .+.++|++++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|
T Consensus        77 v~~~~~~~~~a~-a~a~~~~~~-~i~~~-~~~~~~~~v~~~g~yg~-~~v~~s~Pv~lg~~Gv~~i~~-l~L~~~E~~~L  151 (165)
T d1t2da2          77 IVNLHASPYVAP-AAAIIEMAE-SYLKD-LKKVLICSTLLEGQYGH-SDIFGGTPVVLGANGVEQVIE-LQLNSEEKAKF  151 (165)
T ss_dssp             HHHHTSSCCHHH-HHHHHHHHH-HHHTT-CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHH
T ss_pred             Hhhhccceeech-hHHHHHHHH-HHhhc-cccceeeeecccccccc-CCeeEeeeEEEcCCceEEEeC-CCCCHHHHHHH
Confidence            999999777654 446777655 56676 89999999999999998 79999999997 999999998 89999999999


Q ss_pred             HHHHHHHHHHHHH
Q 020022          314 DLTAEELSEEKAL  326 (332)
Q Consensus       314 ~~s~~~i~~~~~~  326 (332)
                      ++|+++|++.++.
T Consensus       152 ~~s~~~lk~~~~~  164 (165)
T d1t2da2         152 DEAIAETKRMKAL  164 (165)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999988765

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=99.98  E-value=2.3e-32  Score=222.09  Aligned_cols=139  Identities=21%  Similarity=0.305  Sum_probs=116.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      .||+||| +|+||+++++.|+..++.+     ||+|+|+++  ++++|+++||+|+.. ........++.+++++|||+|
T Consensus         2 ~KI~IIG-aG~VG~~~a~~l~~~~l~~-----el~L~D~~~--~~~~g~a~Dl~~~~~-~~~~~~~~~~~~~~~~~adiv   72 (142)
T d1y6ja1           2 SKVAIIG-AGFVGASAAFTMALRQTAN-----ELVLIDVFK--EKAIGEAMDINHGLP-FMGQMSLYAGDYSDVKDCDVI   72 (142)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCSS-----EEEEECCC-----CCHHHHHHTTSCC-CTTCEEEC--CGGGGTTCSEE
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeccC--CccceeeeeeccCcc-cCCCeeEeeCcHHHhCCCceE
Confidence            5999999 5999999999999998876     999999985  678999999999753 444555666789999999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      |++||.+++++++|.+++.+|++++++++++|.+++ |++++|++|||+|+||++++++ +|+|++|++|
T Consensus        73 vitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~-p~ai~ivvtNPvdv~t~~~~k~-sg~p~~rViG  140 (142)
T d1y6ja1          73 VVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVVSNPVDIITYMIQKW-SGLPVGKVIG  140 (142)
T ss_dssp             EECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEECSSSHHHHHHHHHHH-HTCCTTTEEE
T ss_pred             EEecccccCcCcchhHHhhHHHHHHHHHHHHhhccC-CCceEEEecChHHHHHHHHHHH-HCCCccceec
Confidence            999999999999999999999999999999999999 5799999999999999999998 7999999655

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=99.98  E-value=1.1e-32  Score=224.88  Aligned_cols=141  Identities=13%  Similarity=0.184  Sum_probs=119.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||+||| +|+||+++++.|+..++.+     |++|+|++  +++++|+++||+|.......+....++.+++++|||+
T Consensus         1 ~kKI~IIG-aG~VG~~~a~~l~~~~~~~-----elvL~Di~--~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adi   72 (146)
T d1hyha1           1 ARKIGIIG-LGNVGAAVAHGLIAQGVAD-----DYVFIDAN--EAKVKADQIDFQDAMANLEAHGNIVINDWAALADADV   72 (146)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCS-----EEEEECSS--HHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSE
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhcCCCc-----eEEEEecc--cchhhhHHHhhhccccccCCccceeccCHHHhccccE
Confidence            36999999 6999999999999988876     99999998  4788999999999875444444445567899999999


Q ss_pred             EEEeCCCCC----CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           85 AVMVGGFPR----KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        85 Vi~~ag~~~----~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      ||++||.++    +++++|.+++..|+++++++++.|.++| |++++|++|||+|+||++++++ +|||++|++|
T Consensus        73 VVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~-p~aivivvtNPvD~~t~~~~k~-sg~p~~rViG  145 (146)
T d1hyha1          73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDVITALFQHV-TGFPAHKVIG  145 (146)
T ss_dssp             EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEE
T ss_pred             EEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecCcHHHHHHHHHHH-hCCCccceeC
Confidence            999999877    6788999999999999999999999999 5799999999999999999999 7999999754

>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.1e-31  Score=225.70  Aligned_cols=162  Identities=18%  Similarity=0.163  Sum_probs=139.1

Q ss_pred             EechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcc-----cchhHHHHHHH
Q 020022          155 CLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDA-----WLNGEFITTVQ  229 (332)
Q Consensus       155 ~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~-----~~~~~~~~~v~  229 (332)
                      +||.||++||++++|+++|++|++|+.+ |||+||++++|+||++++    +|.|+.++.....     +..+++.+..+
T Consensus         1 tGT~LD~~R~~~~vA~~l~v~~~~V~~~-ViG~Hs~~~ip~~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~i~~~~~   75 (172)
T d2ldxa2           1 SGCNLDSARFRYLIGEKLGVNPTSCHGW-VLGEHGDSSVPIWSGVNV----AGVTLKSLNPAIGTDKNKQHWKNVHKQVV   75 (172)
T ss_dssp             CTTHHHHHHHHHHHHHHHTCCTTSSCCC-EEECSSSCEEECGGGCBS----SCSSSSBSTTTCSCSSSSSSCHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHhCcCHHHcEEE-EEcCCCCccccceeccee----cCcchhhHHHHhhhhhhhhhhhhhhhhhc
Confidence            4899999999999999999999999866 689999999999999999    9999988765321     12346777888


Q ss_pred             hhHHHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHH
Q 020022          230 QRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEF  308 (332)
Q Consensus       230 ~~~~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~  308 (332)
                      ..+.+++..|+.+.+.+ |.++..++.+ +..+ .+.++|+++.++|+||+|+++|||+||++ ++|++++++ ++|+++
T Consensus        76 ~~~~~~~~~k~~s~~~~-a~~~~~~~~~-~~~~-~~~~~~~~~~~~g~ygi~~~i~~s~Pv~ig~~Gv~~v~~-l~L~~~  151 (172)
T d2ldxa2          76 EGGYEVLDMKGYTSWAI-GLSVTDLARS-ILKN-LKRVHPVTTLVKGFHGIKEEVFLSIPCVLGESGITDFVK-VNMTAE  151 (172)
T ss_dssp             HHHHHHHHHHSSCCHHH-HHHHHHHHHH-HHTT-CCEEEEEEEECTTSTTCCSSCEEEEEEEEETTEEEEEEC-CCCCHH
T ss_pred             cceeehhhcccchhHHH-HHHHhHHHHh-hcCC-CccceeeeeecccccCCcCCeEEEEEEEEcCCCEEEEec-CCCCHH
Confidence            88889999998777655 4467776655 5566 79999999999999999999999999997 999999998 999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 020022          309 SRKKLDLTAEELSEEKA  325 (332)
Q Consensus       309 E~~~l~~s~~~i~~~~~  325 (332)
                      |+++|++|++.|++.++
T Consensus       152 E~~~l~~s~~~lk~~~k  168 (172)
T d2ldxa2         152 EEGLLKKSADTLWNMQK  168 (172)
T ss_dssp             HHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999986543

>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=1.5e-31  Score=223.97  Aligned_cols=162  Identities=22%  Similarity=0.325  Sum_probs=139.1

Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc----hhHHHHHHHhhH
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL----NGEFITTVQQRG  232 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~----~~~~~~~v~~~~  232 (332)
                      |.||++||++++|+++|+++.+|+.+ |||+||+++||+||++++    +|.|+.+++.+..+.    .+++.+.++..+
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~vp~~s~~~v----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   75 (168)
T d1ldna2           1 TILDTARFRFLLGEYFSVAPQNVHAY-IIGEHGDTELPVWSQAYI----GVMPIRKLVESKGEEAQKDLERIFVNVRDAA   75 (168)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGEEEE-EEBCSSTTCEEEEEEEEE----TTEESTTTSGGGTTTHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHhCcCHHHeEEE-EEcCCCCccccchhhccc----CCcchhhhhhhhhhhhccchhhhhhhhhhhH
Confidence            78999999999999999999999877 589999999999999999    999998877544332    246677777788


Q ss_pred             HHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHH
Q 020022          233 AAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRK  311 (332)
Q Consensus       233 ~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~  311 (332)
                      .+++..|+.+.+.+ +.++.+++.. +..+ .+.++|++++++++||. +|+|||+||++ ++|++++++ ++|+++|++
T Consensus        76 ~~v~~~~~~s~~~~-a~~~~~~~~~-~~~~-~~~~~~~~~~~~~~yg~-~~v~~s~Pv~lg~~Gv~~v~~-l~Ls~~E~~  150 (168)
T d1ldna2          76 YQIIEKKGATYYGI-AMGLARVTRA-ILHN-ENAILTVSAYLDGLYGE-RDVYIGVPAVINRNGIREVIE-IELNDDEKN  150 (168)
T ss_dssp             HHHHHHHSCCCHHH-HHHHHHHHHH-HHTT-CCEEEEEEEEEESTTSC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHH
T ss_pred             HHHHHhhccccchH-HHHHhhHHHh-hhcc-cceeeeeeeeeccccCC-CCeeecceEEEcCCeEEEEeC-CCCCHHHHH
Confidence            89999988766655 4466776654 5566 78999999999999995 79999999997 999999987 899999999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 020022          312 KLDLTAEELSEEKALAY  328 (332)
Q Consensus       312 ~l~~s~~~i~~~~~~~~  328 (332)
                      +|++|++.|++.++.|.
T Consensus       151 ~L~~s~~~lk~~i~~a~  167 (168)
T d1ldna2         151 RFHHSAATLKSVLARAF  167 (168)
T ss_dssp             HHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHc
Confidence            99999999999998864

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=4.3e-32  Score=223.78  Aligned_cols=142  Identities=21%  Similarity=0.389  Sum_probs=127.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ++.||+||| +|.||+++++.|+..++.+     ||+|+|++  +++++|+++||+|............++.++++++||
T Consensus        18 ~~~KI~IIG-aG~VG~~~A~~l~~~~l~~-----elvL~D~~--~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~ad   89 (159)
T d2ldxa1          18 SRCKITVVG-VGDVGMACAISILLKGLAD-----ELALVDAD--TDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSK   89 (159)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHTTTSCS-----EEEEECSC--HHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEE
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCC--chhhhccHHHHhCcchhcCCCeEEeccchhhhcccc
Confidence            456999999 5999999999999998876     99999998  478899999999987555444445556789999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      +||++||.+++++++|++++..|+++++++++.|.+++ |+++++++|||+|+||++++++ +|+|++|++|
T Consensus        90 ivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~-p~~ivivvtNPvDv~t~~~~k~-sg~p~~rV~G  159 (159)
T d2ldxa1          90 LVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNS-PDCKIIVVTNPVDILTYVVWKI-SGFPVGRVIG  159 (159)
T ss_dssp             EEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHS-TTCEEEECSSSHHHHHHHHHHH-HCSCTTTEEE
T ss_pred             EEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCeEEEEeCCcHHHHHHHHHHH-HCcCcccccC
Confidence            99999999999999999999999999999999999999 5799999999999999999998 7999999755

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.3e-31  Score=218.00  Aligned_cols=141  Identities=27%  Similarity=0.383  Sum_probs=121.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |||+||||+|+||+++++.|+.+ +..+     ||+|+|++   +.++|+++||+|............++.+++++|||+
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~-----el~L~D~~---~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDv   72 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGS-----ELSLYDIA---PVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADV   72 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTC-----EEEEECSS---TTHHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCc-----EEEEeccc---ccchhHHHHHHCCccccCCcEEEcCCCccccCCCCE
Confidence            69999997799999999998754 5544     89999986   356899999999876554444445667899999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh---CCCCCCCcEEE
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF---APSIPAKNITC  155 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~---~~~~~~~~i~~  155 (332)
                      ||+++|.+++++++|.+++..|.+++++++++|.+++ |++++|++|||+|+|++++++.   ++++|++|++|
T Consensus        73 vvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~-p~aivivvtNPvD~m~~~~~~v~~~~~~l~~~RviG  145 (145)
T d2cmda1          73 VLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFG  145 (145)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHHHHHHHHHHHHTTCCCGGGEEE
T ss_pred             EEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhC-CCcEEEEccCCchHHHHHHHHHHHHcCCCChhhccC
Confidence            9999999999999999999999999999999999999 5789999999999999988764   35689988654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=99.97  E-value=1.1e-31  Score=218.44  Aligned_cols=139  Identities=22%  Similarity=0.386  Sum_probs=123.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~~al~~aD   83 (332)
                      |||+||| +|+||+++++.|+..++.+     ||+|+|+++  +++++.++|++|....  ...++.. ++++++++|||
T Consensus         1 mKI~IIG-aG~VG~~la~~l~~~~l~~-----el~L~Di~~--~~~~~~~~d~~~~~~~~~~~~~i~~-~~~~~~~~dad   71 (142)
T d1guza1           1 MKITVIG-AGNVGATTAFRLAEKQLAR-----ELVLLDVVE--GIPQGKALDMYESGPVGLFDTKVTG-SNDYADTANSD   71 (142)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCS-----EEEEECSSS--SHHHHHHHHHHTTHHHHTCCCEEEE-ESCGGGGTTCS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCc-----eEEEecccc--ccchhhhhhhhcccchhcccceEEe-cCCHHHhcCCe
Confidence            6999999 5999999999999998876     999999985  6788889999887642  2334443 45688999999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      +||+++|.++++|++|.+++.+|+++++++++.|.++| |+++++++|||+|++++++++. +|+|++|++|
T Consensus        72 vvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~-p~aivivvtNPvd~~~~~~~~~-sg~p~~rviG  141 (142)
T d1guza1          72 IVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSNPLDIMTHVAWVR-SGLPKERVIG  141 (142)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCSSHHHHHHHHHHH-HCSCGGGEEE
T ss_pred             EEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccC-CCeEEEEecCChHHHHHHHHHH-hCCChHhEee
Confidence            99999999999999999999999999999999999999 6899999999999999999998 6999999766

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=99.97  E-value=1.3e-31  Score=218.61  Aligned_cols=141  Identities=20%  Similarity=0.338  Sum_probs=115.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.+||+||| +|+||+++++.|++.++.+     ||+|+|+++  ++++|+++||+|............ .+++++++||
T Consensus         4 ~~~KI~IIG-aG~VG~~~A~~l~~~~~~~-----elvL~D~~~--~~~~g~a~Dl~~a~~~~~~~~~~~-~d~~~~~~ad   74 (146)
T d1ez4a1           4 NHQKVVLVG-DGAVGSSYAFAMAQQGIAE-----EFVIVDVVK--DRTKGDALDLEDAQAFTAPKKIYS-GEYSDCKDAD   74 (146)
T ss_dssp             TBCEEEEEC-CSHHHHHHHHHHHHHTCCS-----EEEEECSSH--HHHHHHHHHHHGGGGGSCCCEEEE-CCGGGGTTCS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcCCCc-----EEEEeeccc--chhHHHHHHHhccccccCCceEee-ccHHHhcccc
Confidence            357999999 6999999999999998866     999999984  788999999999875444444444 4578899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      +||+++|.+++++++|.+++..|+++++++++.|.++| |++++|++|||+|++++++++. +|+|++|++|
T Consensus        75 ivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~-p~aivivvtNPvdv~t~~~~k~-sg~p~~rViG  144 (146)
T d1ez4a1          75 LVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVAANPVDILTYATWKF-SGFPKERVIG  144 (146)
T ss_dssp             EEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEE
T ss_pred             EEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcC-CCcEEEEeCCccHHHHHHHHHH-HCcCccceec
Confidence            99999999999999999999999999999999999999 5799999999999999999998 7999999655

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.97  E-value=6.5e-31  Score=213.72  Aligned_cols=139  Identities=26%  Similarity=0.413  Sum_probs=120.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccc-eEeeCChhhhcCCCcEE
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKG-VVATTDAVEACTGVNIA   85 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~-~~~~~~~~~al~~aDiV   85 (332)
                      ||+||||+|+||+++++.|+..++++     ||+|+|+++    .+++++|++|........ +....+.+++++|||+|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~-----elvLiDi~~----~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDiv   72 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVS-----RLTLYDIAH----TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVV   72 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCS-----EEEEEESSS----HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccc-----eEEEEeccc----cchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEE
Confidence            89999977999999999999999877     999999974    467889999987544333 33455778999999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH---hCCCCCCCcEEE
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE---FAPSIPAKNITC  155 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~---~~~~~~~~~i~~  155 (332)
                      |+++|.++++|++|.+++..|+++++++++.|.+++ |+++++++|||+|++++++++   ..++||++|++|
T Consensus        73 Vitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~-p~~iiivvtNPvD~~t~~~~~~~kk~~~~p~~rViG  144 (144)
T d1mlda1          73 VIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFG  144 (144)
T ss_dssp             EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEE
T ss_pred             EECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcC-CCeEEEEecCchhhhHHHHHHHHHHhcCCCcccccC
Confidence            999999999999999999999999999999999998 579999999999998887652   336899999754

>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=99.97  E-value=5.8e-33  Score=233.63  Aligned_cols=165  Identities=24%  Similarity=0.350  Sum_probs=140.5

Q ss_pred             chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhccc----chhHHHHHHHhhH
Q 020022          157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW----LNGEFITTVQQRG  232 (332)
Q Consensus       157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~----~~~~~~~~v~~~~  232 (332)
                      |.||++||++++|+++|+++.+|+.+ |||+||++|||+||++++    +|.|+.+++.+..|    ..+++.+.+++++
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~vp~~s~~~i----~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   75 (172)
T d1llca2           1 TSLDTARFRQSIAEMVNVDARSVHAY-IMGEHGDTEFPVWSHANI----GGVTIAEWVKAHPEIKEDKLVKMFEDVRDAA   75 (172)
T ss_dssp             THHHHHHHHHHHHHHSCCCTTSCEEE-EEBSSSSSCEEEEEEEES----TTCCSSSSSSCSCSSSSSSSSTTTTTTGGGT
T ss_pred             CchHHHHHHHHHHHHhCcCHHHeEEE-EEcCCCCcceeeeecccc----CCccHHHHHhhhhccchhHHHHHHHhhcchH
Confidence            78999999999999999999999977 589999999999999999    99999888754322    2246677788889


Q ss_pred             HHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHH
Q 020022          233 AAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRK  311 (332)
Q Consensus       233 ~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~  311 (332)
                      ++++++||++++.+ |.+++.++. ++..+ .+.++|++++++|+||+ +++|||+||++ ++|++++++ ++|+++|++
T Consensus        76 ~~i~~~kg~~~~a~-a~~~~~~~~-~~~~~-~~~~~~~~~~~~g~ygi-~~~~~s~P~~lg~~Gv~~i~~-l~L~~~E~~  150 (172)
T d1llca2          76 YEIIKLKGATFYGI-ATALARISK-AILND-ENAVLPLSVYMDGQYGI-NDLYIGTPAVINRNGIQNILE-IPLTDHEEE  150 (172)
T ss_dssp             TTTSSSSSCTTHHH-HHHHHHHHH-HHHHT-CCCCEECCCCCSSSSSC-CSSCCBCEEEEETTEEEEECC-CCCTTHHHH
T ss_pred             HHHHHhhhhhhhhh-HHHHHHHHH-HHhcC-CCCccceeeeecCccCc-ccceEEEEEEEcCCceEEEec-CCCCHHHHH
Confidence            99999999766654 446777665 46666 78899999999999999 58999999987 999999998 899999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhh
Q 020022          312 KLDLTAEELSEEKALAYSCL  331 (332)
Q Consensus       312 ~l~~s~~~i~~~~~~~~~~~  331 (332)
                      +|++|+++|++.++.+...+
T Consensus       151 ~l~~s~~~lk~~i~~~~~~~  170 (172)
T d1llca2         151 SMQKSASQLKKVLTDAFAKN  170 (172)
T ss_dssp             HHHTTTTTTTTTTTTTCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhh
Confidence            99999999998887665443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.97  E-value=2.5e-30  Score=212.88  Aligned_cols=144  Identities=19%  Similarity=0.296  Sum_probs=126.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChhhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEA   78 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~~a   78 (332)
                      |-.+++||+||| +|.||+++++.|++.++ .     |++|+|+++  ++++|+++|+.|....  ....+..+++.+++
T Consensus         3 ~~~k~~KI~IIG-aG~VG~~lA~~l~~~~~-~-----el~L~D~~~--~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~   73 (154)
T d1pzga1           3 LVQRRKKVAMIG-SGMIGGTMGYLCALREL-A-----DVVLYDVVK--GMPEGKALDLSHVTSVVDTNVSVRAEYSYEAA   73 (154)
T ss_dssp             CCSCCCEEEEEC-CSHHHHHHHHHHHHHTC-C-----EEEEECSSS--SHHHHHHHHHHHHHHHTTCCCCEEEECSHHHH
T ss_pred             cccCCCcEEEEC-CCHHHHHHHHHHHhCCC-c-----eEEEEEecc--ccchhHHHHHhhhccccCCeeEEeccCchhhh
Confidence            334568999999 59999999999988775 3     899999985  6889999999997643  23455666777889


Q ss_pred             cCCCcEEEEeCCCCCCCCC-----CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE
Q 020022           79 CTGVNIAVMVGGFPRKEGM-----ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI  153 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~-----~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i  153 (332)
                      +++||+||+++|.++++|+     +|.+++..|+++++++++.|.++| |+++++++|||+|++|+++++. +|+|++|+
T Consensus        74 ~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~-p~aiviivsNPvd~lt~~~~~~-sg~p~~rV  151 (154)
T d1pzga1          74 LTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCMVKVMCEA-SGVPTNMI  151 (154)
T ss_dssp             HTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGE
T ss_pred             hcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEeCCcHHHHHHHHHHH-hCcChhcE
Confidence            9999999999999999985     899999999999999999999999 5799999999999999999998 79999997


Q ss_pred             EE
Q 020022          154 TC  155 (332)
Q Consensus       154 ~~  155 (332)
                      +|
T Consensus       152 iG  153 (154)
T d1pzga1         152 CG  153 (154)
T ss_dssp             EE
T ss_pred             ec
Confidence            66

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=99.97  E-value=8.3e-31  Score=213.02  Aligned_cols=139  Identities=24%  Similarity=0.385  Sum_probs=113.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--ccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--LKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--~~~~~~~~~~~~al~~a   82 (332)
                      ++||+||| +|.||+++|+.|++.++ .     +++|+|+++  +++++.++|+.|.....  ..+++.+ +.++++++|
T Consensus         1 r~KI~IIG-aG~VG~~~A~~l~~~~l-~-----dl~l~D~~~--~~~~~~~~Dl~~~~~~~~~~~~i~~~-~d~~~~~~a   70 (142)
T d1uxja1           1 RKKISIIG-AGFVGSTTAHWLAAKEL-G-----DIVLLDIVE--GVPQGKALDLYEASPIEGFDVRVTGT-NNYADTANS   70 (142)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTC-S-----EEEEECSSS--SHHHHHHHHHHTTHHHHTCCCCEEEE-SCGGGGTTC
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHhCCc-c-----eEEEEeecc--ccchhHHHHhhccccccCCCCEEEec-CcHHHhcCC
Confidence            36999999 59999999999998875 2     799999985  67899999999986533  3344444 457789999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      |+||++||.+++++++|.+++..|+++++++++.|.++| |+++++++|||+|+||+++++. +|+|++|++|
T Consensus        71 dvvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~-p~aivivvtNPvDv~t~~~~~~-sglp~~rViG  141 (142)
T d1uxja1          71 DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNNPLDAMTYLAAEV-SGFPKERVIG  141 (142)
T ss_dssp             SEEEECCSCC---------CHHHHHHHHHHHHHHHGGGC-TTCEEEECSSSHHHHHHHHHHH-HCCCGGGEEE
T ss_pred             CEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccC-CCceEEEeCCchHHHHHHHHHH-HCcCcccccC
Confidence            999999999999999999999999999999999999999 5799999999999999999998 7999999765

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=3e-30  Score=211.08  Aligned_cols=141  Identities=19%  Similarity=0.417  Sum_probs=121.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al~~a   82 (332)
                      +..||+||| +|+||+++++.|++.++ .     ||+|+|+++  ++++|+++|++|.... ........++.+++++||
T Consensus         2 p~~KI~IIG-aG~VG~~~a~~l~~~~l-~-----el~L~Di~~--~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~a   72 (150)
T d1t2da1           2 PKAKIVLVG-SGMIGGVMATLIVQKNL-G-----DVVLFDIVK--NMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGA   72 (150)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTC-C-----EEEEECSSS--SHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTC
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHhCCC-C-----eEEEEeccC--CcceeeecchhhhccccCCCcEEEecccccccCCC
Confidence            356999999 69999999998888774 4     899999985  6889999999997642 222223334678999999


Q ss_pred             cEEEEeCCCCCCCCCC-----HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           83 NIAVMVGGFPRKEGME-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~-----r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      |+||+++|.++++|++     |.+++..|+++++++++.|.++| |+++++++|||+|+||+++++. +|||++|++|
T Consensus        73 dvvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~-p~aivivvtNPvD~~t~~~~~~-sg~p~~rViG  148 (150)
T d1t2da1          73 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVMVQLLHQH-SGVPKNKIIG  148 (150)
T ss_dssp             SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHHHHHHHHH-HCCCGGGEEE
T ss_pred             cEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcC-CCeEEEEecCchHHHHHHHHHH-HCCCchheec
Confidence            9999999999999865     99999999999999999999999 5899999999999999999998 7999999655

>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=99.97  E-value=1e-29  Score=211.16  Aligned_cols=158  Identities=20%  Similarity=0.280  Sum_probs=134.9

Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHH
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAI  235 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i  235 (332)
                      ||+||++||+++||+++|++|++|+++ |||+||++++|+||++++    ++.+.....    +...++.+.++..+.++
T Consensus         2 Gt~LD~~R~~~~lA~~l~v~~~~V~~~-ViG~Hg~~~v~~~s~~~v----~~~~~~~~~----~~~~~~~~~~~~~~~~i   72 (161)
T d1o6za2           2 GGRLDSARFRYVLSEEFDAPVQNVEGT-ILGEHGDAQVPVFSKVSV----DGTDPEFSG----DEKEQLLGDLQESAMDV   72 (161)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCGGGEECC-EEECSSTTEEECGGGCEE----TTBCCCCCH----HHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHCcCHHHeEEE-EEeCCCCceeeehhhhcc----cccccccch----HHHHHHHHHhhhhHHHH
Confidence            599999999999999999999999988 589999999999999999    777754221    12356777888899999


Q ss_pred             HHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022          236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD  314 (332)
Q Consensus       236 ~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~  314 (332)
                      ++.++.+.+.+ +.++..++. ++..+ .+.+.+++++++|+|+. .++|||+||++ ++|++++++ ++|+++|+++|+
T Consensus        73 ~~~~~~s~~~~-a~a~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~-~~i~~S~Pv~ig~~Gv~~v~~-l~l~~~E~~~L~  147 (161)
T d1o6za2          73 IERKGATEWGP-ARGVAHMVE-AILHD-TGEVLPASVKLEGEFGH-EDTAFGVPVSLGSNGVEEIVE-WDLDDYEQDLMA  147 (161)
T ss_dssp             HTTTSSCCHHH-HHHHHHHHH-HHHTT-CCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHH
T ss_pred             HHhhhhhhhHH-HHhhHhhhH-hhhhc-cccceeecccccccccc-cCceeeeeeEEcCCCEEEEeC-CCCCHHHHHHHH
Confidence            99998776654 446777655 46666 78888999999999886 79999999997 999999997 999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 020022          315 LTAEELSEEKALA  327 (332)
Q Consensus       315 ~s~~~i~~~~~~~  327 (332)
                      +|++.|+++++.+
T Consensus       148 ~s~~~L~~~~~~i  160 (161)
T d1o6za2         148 DAAEKLSDQYDKI  160 (161)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999999875

>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.96  E-value=3.1e-29  Score=210.06  Aligned_cols=159  Identities=18%  Similarity=0.174  Sum_probs=121.9

Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEecc-CCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHH
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH-SSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAA  234 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h-g~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~  234 (332)
                      .|.||++||++++|++++++|++|++++ +|+| |++++|+||++.+    ++....+       ..+++.+.+++++++
T Consensus         1 ~T~LDs~R~~~~la~~l~v~~~~V~~~V-iGeHg~~t~vp~~s~~~~----~~~~~~~-------~~~~l~~~v~~~~~e   68 (169)
T d1mlda2           1 VTTLDIVRANAFVAELKGLDPARVSVPV-IGGHAGKTIIPLISQCTP----KVDFPQD-------QLSTLTGRIQEAGTE   68 (169)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCGGGCBCCE-EECSSGGGEEECGGGCBS----CCCCCHH-------HHHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHCcCHHHeeEEE-EEcCCCcceeehhhhhcc----CCCCcHH-------HHHHHHHHHHHhHHH
Confidence            4889999999999999999999999886 6888 5688888888877    5543221       125788999999999


Q ss_pred             HHHhcCccc--hHHHHHHHHHHHHH---HHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCH
Q 020022          235 IIKARKLSS--ALSAASSACDHIRD---WVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDE  307 (332)
Q Consensus       235 i~~~kg~~~--~~~~a~~~~~~i~~---~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~  307 (332)
                      |++.||.++  .++++.+++..+..   ++.++  ..+.++   +.+.||.+.++|+|+||++ ++|++++++ + +|++
T Consensus        69 ii~~k~~~~~~~~~~~~a~~~~~~~i~~~~~~~--~~v~~~---~~~~~~~~~~v~~s~P~~ig~~Gi~~v~~-l~~L~~  142 (169)
T d1mlda2          69 VVKAKAGAGSATLSMAYAGARFVFSLVDAMNGK--EGVVEC---SFVKSQETDCPYFSTPLLLGKKGIEKNLG-IGKISP  142 (169)
T ss_dssp             HHHHHTTSCSCCHHHHHHHHHHHHHHHHHHHTC--TTCEEE---EEEECCSSSSSEEEEEEEEETTEEEEECC-CCSCCH
T ss_pred             HHHhhcCcChHhHHHHHHHHHHHHHhccccCCc--eEEEEE---eeccccccCCEeEeeeEEEcCCccEEEec-CCCCCH
Confidence            999987543  24444444443322   23333  333333   2344555578999999997 999999998 6 7999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhC
Q 020022          308 FSRKKLDLTAEELSEEKALAYSCLS  332 (332)
Q Consensus       308 ~E~~~l~~s~~~i~~~~~~~~~~~~  332 (332)
                      +|+++|++|++.|++.++.+++|++
T Consensus       143 ~E~~~l~~s~~~lk~~I~~g~~fi~  167 (169)
T d1mlda2         143 FEEKMIAEAIPELKASIKKGEEFVK  167 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999985

>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=6.1e-28  Score=201.66  Aligned_cols=160  Identities=17%  Similarity=0.160  Sum_probs=123.4

Q ss_pred             echHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC-ceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHH
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAA  234 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~-~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~  234 (332)
                      .|.||++||++++|+++|++|++|++++ +|+||+ +++|++|++..    .+.+        .+..+++.+.+++++.+
T Consensus         1 ~T~LDs~R~~~~iA~~l~v~~~~V~~~V-iGghg~~~~~p~~s~~~~----~~~~--------~~~~~~l~~~v~~~g~~   67 (167)
T d2cmda2           1 VTTLDIIRSNTFVAELKGKQPGEVEVPV-IGGHSGVTILPLLSQVPG----VSFT--------EQEVADLTKRIQNAGTE   67 (167)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGCCCCE-EECSSTTTEEECGGGCTT----CCCC--------HHHHHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHCcCHHHeEEEE-EEcCCCceEeeecccccC----CCCc--------HHHHHHHHHHHHhhhhh
Confidence            4789999999999999999999999886 688876 55566566543    2211        12346899999999999


Q ss_pred             HHHhcCc--cchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHH
Q 020022          235 IIKARKL--SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSR  310 (332)
Q Consensus       235 i~~~kg~--~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~  310 (332)
                      +++.|+.  +..+++|.++++++.. +..+ .+...++++.+.++||.++++|||+||++ ++|++++++ + +|+++|+
T Consensus        68 ii~~~~~~~~~~~~~a~a~~~~~~~-i~~~-~~~~~~~~~~~~~~~~~~~~i~~s~P~~ig~~Gv~~v~~-l~~L~~~E~  144 (167)
T d2cmda2          68 VVEAKAGGGSATLSMGQAAARFGLS-LVRA-LQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKS-IGTLSAFEQ  144 (167)
T ss_dssp             HHHHHTTSCSCCHHHHHHHHHHHHH-HHHH-HTTCSSCEEEEEEECCCSSCSEEEEEEEEETTEEEEECC-CCCCCHHHH
T ss_pred             hhhhhccCcchHHHHHHHHHHHHHH-Hhcc-CCCceEEEEEcccccccCCCccccccEEEeCCceEEEee-CCCCCHHHH
Confidence            9987642  3345566666665443 4433 33444555666677877788999999997 999999998 6 6999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhh
Q 020022          311 KKLDLTAEELSEEKALAYSCL  331 (332)
Q Consensus       311 ~~l~~s~~~i~~~~~~~~~~~  331 (332)
                      ++|++|+++|++.++.+++|+
T Consensus       145 ~~l~~s~~~lk~~I~~~~~fi  165 (167)
T d2cmda2         145 NALEGMLDTLKKDIALGQEFV  165 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999997

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=6.3e-25  Score=183.25  Aligned_cols=143  Identities=14%  Similarity=0.128  Sum_probs=112.5

Q ss_pred             CcEEEEEcCCCchHHHH--HHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc----CCccceEeeCChhhh
Q 020022            5 PVRVLVTGAAGQIGYAL--VPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PLLKGVVATTDAVEA   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~l--a~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~----~~~~~~~~~~~~~~a   78 (332)
                      ++||+||| +|++|...  +..++....+.   ..||+|+|+++  ++.++.++|+.+...    ....++..++|.+++
T Consensus         1 k~KI~iIG-aGs~~~~~~~~~l~~~~~~~~---~~eI~L~Di~e--~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~a   74 (169)
T d1s6ya1           1 RLKIATIG-GGSSYTPELVEGLIKRYHELP---VGELWLVDIPE--GKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRA   74 (169)
T ss_dssp             CEEEEEET-TTCTTHHHHHHHHHHTTTTCC---EEEEEEECCGG--GHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHH
T ss_pred             CcEEEEEC-CChhhHHHHHHHHHHhccccC---CCEEEEEcCCc--cHHHHHHHHHHHHHHHHhcCCCceeeecCCchhh
Confidence            47999999 59887653  33444332211   12899999985  455667888866432    234577788999999


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHH--------------------HHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDV--------------------MSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~--------------------~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                      ++|||+||+++|.+++++++|+++                    +.+|+++++++++.|+++| |++|+|++|||+|++|
T Consensus        75 l~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~-pda~~i~vtNPvdv~t  153 (169)
T d1s6ya1          75 LDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLINFTNPAGMVT  153 (169)
T ss_dssp             HTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHH
T ss_pred             cCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcC-CCeEEEEeCChHHHHH
Confidence            999999999999998877777665                    4689999999999999999 6899999999999999


Q ss_pred             HHHHHhCCCCCCCcEEEec
Q 020022          139 LILKEFAPSIPAKNITCLT  157 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t  157 (332)
                      +++++++   |++|++|.|
T Consensus       154 ~~~~k~~---p~~kviGlC  169 (169)
T d1s6ya1         154 EAVLRYT---KQEKVVGLC  169 (169)
T ss_dssp             HHHHHHC---CCCCEEECC
T ss_pred             HHHHHHC---CCCCEEeeC
Confidence            9999983   777887765

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=7.9e-25  Score=181.65  Aligned_cols=143  Identities=15%  Similarity=0.093  Sum_probs=113.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~al~~   81 (332)
                      +..||+||| +|++|.+.+...+...... -...||+|+|++  ++++++.+.++.+...  ....++..+++.++|++|
T Consensus         2 k~~KI~iIG-aGsv~~~~~~~~ll~~~~~-l~~~eivL~Did--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~   77 (167)
T d1u8xx1           2 KSFSIVIAG-GGSTFTPGIVLMLLDHLEE-FPIRKLKLYDND--KERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTD   77 (167)
T ss_dssp             CCEEEEEEC-TTSSSHHHHHHHHHHTTTT-SCEEEEEEECSC--HHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSS
T ss_pred             CCceEEEEC-CChhhhHHHHHHHHhhhhh-cCCCEEEEEcCC--hhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCC
Confidence            457999999 5999887554322211111 001289999998  4778877777776543  344677888999999999


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHH--------------------hhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMS--------------------KNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~--------------------~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                      ||+||+++|.+++++++|++++.                    +|+++++++++.|+++| |++|+|++|||+|++|+++
T Consensus        78 AD~Vvitag~~~~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~-P~A~li~~TNPvdv~t~~~  156 (167)
T d1u8xx1          78 VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNPAAIVAEAT  156 (167)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSCHHHHHHHH
T ss_pred             CCEEEECCCcCCCCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhC-CCeEEEEeCCHHHHHHHHH
Confidence            99999999999999998888754                    57999999999999999 6899999999999999999


Q ss_pred             HHhCCCCCCCcEE
Q 020022          142 KEFAPSIPAKNIT  154 (332)
Q Consensus       142 ~~~~~~~~~~~i~  154 (332)
                      ++++   |+.|+.
T Consensus       157 ~k~~---P~~rVI  166 (167)
T d1u8xx1         157 RRLR---PNSKIL  166 (167)
T ss_dssp             HHHS---TTCCEE
T ss_pred             HHHC---Cccccc
Confidence            9983   777753

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=8.1e-25  Score=181.35  Aligned_cols=142  Identities=12%  Similarity=0.097  Sum_probs=109.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|++|.+.+...+....... ...||+|+|+++  ++++ .+.|+.+.......++..+++.+++++|||+|
T Consensus         1 mKIaiIG-aGs~g~~~~~~~l~~~~~~~-~~~el~L~Did~--~k~~-~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvV   75 (162)
T d1up7a1           1 MRIAVIG-GGSSYTPELVKGLLDISEDV-RIDEVIFYDIDE--EKQK-IVVDFVKRLVKDRFKVLISDTFEGAVVDAKYV   75 (162)
T ss_dssp             CEEEEET-TTCTTHHHHHHHHHHHTTTS-CCCEEEEECSCH--HHHH-HHHHHHHHHHTTSSEEEECSSHHHHHTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHhccccc-CccEEEEEecCc--HHHH-HHHHHHHhhhccCceEEEecCcccccCCCCEE
Confidence            6999999 59999988876544322110 012899999985  5665 46777776655566778889999999999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHh--------------------hHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           86 VMVGGFPRKEGMERKDVMSK--------------------NVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~--------------------n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                      |+++|.+++++++|++++..                    +++.+.++.+ +.++| |++|+|++|||+|++|+++++++
T Consensus        76 Vita~~~~~~~~~r~~~i~~~~~i~~~~~~g~~g~~~~~r~~~~~~~i~~-~~~~~-p~a~~i~vtNPvdiit~~~~~~~  153 (162)
T d1up7a1          76 IFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVD-TVRKT-SNATIVNFTNPSGHITEFVRNYL  153 (162)
T ss_dssp             EECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHH-HHHHT-TCCEEEECSSSHHHHHHHHHHTT
T ss_pred             EEecccCCCCCcchHhhhhhhcCeeeeeccCcchhhhhhhhhHHHHHHhh-hhccC-CCeEEEEeCCHHHHHHHHHHHhC
Confidence            99999998888777766544                    5556666655 77888 68999999999999999999983


Q ss_pred             CCCCCCcEEEec
Q 020022          146 PSIPAKNITCLT  157 (332)
Q Consensus       146 ~~~~~~~i~~~t  157 (332)
                         |.+|+.|.|
T Consensus       154 ---p~~rviGlC  162 (162)
T d1up7a1         154 ---EYEKFIGLC  162 (162)
T ss_dssp             ---CCSSEEECC
T ss_pred             ---CCCCEEeeC
Confidence               667877765

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=99.89  E-value=3.3e-23  Score=172.92  Aligned_cols=137  Identities=15%  Similarity=0.146  Sum_probs=107.0

Q ss_pred             CCcEEEEEcCCCchHHHHHH--HHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVP--MIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~--~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~al   79 (332)
                      ++|||+||| +|++|++++.  .|+....+.   ..||+|+|++  ++++++.+.|+.|...  ....++..+++.++|+
T Consensus         1 p~mKI~iIG-aGsvg~t~~~~~~l~~~~~l~---~~eivL~Did--~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL   74 (171)
T d1obba1           1 PSVKIGIIG-AGSAVFSLRLVSDLCKTPGLS---GSTVTLMDID--EERLDAILTIAKKYVEEVGADLKFEKTMNLDDVI   74 (171)
T ss_dssp             CCCEEEEET-TTCHHHHHHHHHHHHTCGGGT---TCEEEEECSC--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHH
T ss_pred             CCcEEEEEC-CCHHHhHHHHHHHHHhccccC---CCEEEEEeCC--chHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcc
Confidence            368999999 5999987543  344322111   1289999998  4788989999988653  3346778889999999


Q ss_pred             CCCcEEEEeCCCC------------------CCCCCCHHHH--------HHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           80 TGVNIAVMVGGFP------------------RKEGMERKDV--------MSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        80 ~~aDiVi~~ag~~------------------~~~~~~r~~~--------~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      +|||+||++++.+                  +.++++|.+.        +.+|+++++++++.|+++| |++|+|++|||
T Consensus        75 ~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~-p~a~~i~~TNP  153 (171)
T d1obba1          75 IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS-PKAWYLQAANP  153 (171)
T ss_dssp             TTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC-TTCEEEECSSC
T ss_pred             cCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHC-cCeEEEEECCh
Confidence            9999999987653                  3344554443        4689999999999999999 68999999999


Q ss_pred             ccchHHHHHHhCCCC
Q 020022          134 ANTNALILKEFAPSI  148 (332)
Q Consensus       134 ~~~~~~~~~~~~~~~  148 (332)
                      +|++|++++++ +++
T Consensus       154 vdv~t~~~~k~-~~~  167 (171)
T d1obba1         154 IFEGTTLVTRT-VPI  167 (171)
T ss_dssp             HHHHHHHHHHH-SCS
T ss_pred             HHHHHHHHHHh-cCC
Confidence            99999999999 444

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.2e-10  Score=97.62  Aligned_cols=109  Identities=19%  Similarity=0.253  Sum_probs=81.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh----hhh---c------------
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV----DAA---F------------   63 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~----~~~---~------------   63 (332)
                      |+-+||+||| +|.||+.+|..++..|.       ++.|+|+++  +.++.....++    ...   .            
T Consensus         2 ~~IkkvaViG-aG~mG~~iA~~~a~~G~-------~V~l~D~~~--~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~   71 (192)
T d1f0ya2           2 IIVKHVTVIG-GGLMGAGIAQVAAATGH-------TVVLVDQTE--DILAKSKKGIEESLRKVAKKKFAENPKAGDEFVE   71 (192)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHH
T ss_pred             ceeEEEEEEC-cCHHHHHHHHHHHhCCC-------cEEEEECCh--HHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHH
Confidence            4567999999 69999999999998875       899999985  33321111111    110   0            


Q ss_pred             CCccceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch
Q 020022           64 PLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN  137 (332)
Q Consensus        64 ~~~~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~  137 (332)
                      ....++..+++..+++++||+||.+.              .+|.++.+++...+++++++++  |+.||...+.
T Consensus        72 ~~l~~i~~~~d~~~a~~~ad~ViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~l~  129 (192)
T d1f0ya2          72 KTLSTIATSTDAASVVHSTDLVVEAI--------------VENLKVKNELFKRLDKFAAEHT--IFASNTSSLQ  129 (192)
T ss_dssp             HHHHTEEEESCHHHHTTSCSEEEECC--------------CSCHHHHHHHHHHHTTTSCTTC--EEEECCSSSC
T ss_pred             HHHhhccccchhHhhhcccceehhhc--------------ccchhHHHHHHHHHhhhcccCc--eeeccCcccc
Confidence            01246788889999999999999984              4688999999999999998875  5688876543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=98.92  E-value=1.3e-09  Score=90.78  Aligned_cols=112  Identities=21%  Similarity=0.230  Sum_probs=78.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH----HHhhhhc--C--------Cccc
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM----ELVDAAF--P--------LLKG   68 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~----dl~~~~~--~--------~~~~   68 (332)
                      ++-+||+||| +|.||+.+|..++..|.       +++|+|+++  +.++....    .+.+...  .        ...+
T Consensus         2 ~~I~~vaViG-aG~mG~~iA~~~a~~G~-------~V~l~D~~~--~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~   71 (186)
T d1wdka3           2 KDVKQAAVLG-AGIMGGGIAYQSASKGT-------PILMKDINE--HGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNG   71 (186)
T ss_dssp             CCCSSEEEEC-CHHHHHHHHHHHHHTTC-------CEEEECSSH--HHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEECCH--HHHhhhhhhhhhhHHhhhcccccchhhhhhhhce
Confidence            3457899999 69999999999998875       799999985  33321111    1111110  0        1234


Q ss_pred             eEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           69 VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        69 ~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                      +..+++ .+++.+||+||.+.              .+|+++.+++..+|+++++|++  |++||...+...-+
T Consensus        72 i~~~~~-~~~~~~adlViEav--------------~E~l~~K~~lf~~l~~~~~~~~--IiaSnTS~l~i~~l  127 (186)
T d1wdka3          72 IRPTLS-YGDFGNVDLVVEAV--------------VENPKVKQAVLAEVENHVREDA--ILASNTSTISISLL  127 (186)
T ss_dssp             EEEESS-STTGGGCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTTC--EEEECCSSSCHHHH
T ss_pred             eecccc-cccccccceeeeee--------------cchHHHHHHHHHHHHhhcCCCe--eEEeccccccHHHH
Confidence            666654 56799999999974              3578999999999999998886  57888766543333

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.92  E-value=1.7e-09  Score=98.81  Aligned_cols=175  Identities=11%  Similarity=0.086  Sum_probs=110.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.|||+||||+||+|++++..|+..|.       +|+.+|+.......    .++....+. ..++....+..++++++|
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-------~V~~~d~~~~~~~~----~~~~~~~~~-~~D~~~~~~~~~~~~~~d   81 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGH-------YVIASDWKKNEHMT----EDMFCDEFH-LVDLRVMENCLKVTEGVD   81 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCCSSSC----GGGTCSEEE-ECCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEeCCCccchh----hhcccCcEE-EeechhHHHHHHHhhcCC
Confidence            468999999999999999999998763       78889876422111    111110000 001111123456778999


Q ss_pred             EEEEeCCCCCCC---CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH----------HHHhCCCCCC
Q 020022           84 IAVMVGGFPRKE---GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----------LKEFAPSIPA  150 (332)
Q Consensus        84 iVi~~ag~~~~~---~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~----------~~~~~~~~~~  150 (332)
                      .||++|+.....   ..........|+.....+.....+.+.+  ++|..|.-...-..-          .... +...|
T Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk--~~i~~SS~~~~~~~~~~~~~~~~~~~~e~-~~~~p  158 (363)
T d2c5aa1          82 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIK--RFFYASSACIYPEFKQLETTNVSLKESDA-WPAEP  158 (363)
T ss_dssp             EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEGGGSCGGGSSSSSSCEECGGGG-SSBCC
T ss_pred             eEeecccccccccccccccccccccccchhhHHHHhHHhhCcc--ccccccccccccccccccccccccccccC-CcCCC
Confidence            999998765321   2345566788999999999999887643  466555422110000          0000 00122


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCcee
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY  193 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v  193 (332)
                      ...++.+.+...++...+++..|++..-++...|+|.++....
T Consensus       159 ~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~  201 (363)
T d2c5aa1         159 QDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKG  201 (363)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccc
Confidence            3467888888888888888999999888888888897765333

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.3e-09  Score=95.04  Aligned_cols=169  Identities=9%  Similarity=-0.011  Sum_probs=108.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||.|+||+|++|++++..|+..|.       +|+.+|.... ...+    .+.........++.-......++.++|+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~-------~V~~~d~~~~-~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~d~   68 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGH-------EVTVVDNFFT-GRKR----NVEHWIGHENFELINHDVVEPLYIEVDQ   68 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSS-CCGG----GTGGGTTCTTEEEEECCTTSCCCCCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCCCc-CCHH----HHHHhcCCCceEEEehHHHHHHHcCCCE
Confidence            36999999999999999999988763       7888886321 1111    1111111111122222334566779999


Q ss_pred             EEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH----HH-HhC---CCCCCCcEE
Q 020022           85 AVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LK-EFA---PSIPAKNIT  154 (332)
Q Consensus        85 Vi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~----~~-~~~---~~~~~~~i~  154 (332)
                      |||+|+....+  ..+..+.+..|+...+++.+.+++..   .++|++|.. .+....    .. ...   +-+.|...+
T Consensus        69 VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~---~k~I~~SS~-~vy~~~~~~~~~e~~~~~~~~~~p~~~Y  144 (312)
T d2b69a1          69 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG---ARLLLASTS-EVYGDPEVHPQSEDYWGHVNPIGPRACY  144 (312)
T ss_dssp             EEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT---CEEEEEEEG-GGGBSCSSSSBCTTCCCBCCSSSTTHHH
T ss_pred             EEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC---CcEEEEECh-heecCCCCCCCCccccCCCCCCCCccHH
Confidence            99999864321  23556778999999999999998875   356665431 110000    00 000   001233467


Q ss_pred             EechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          155 CLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       155 ~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      +.+......+....++..|++...++...|+|.+.
T Consensus       145 ~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~  179 (312)
T d2b69a1         145 DEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM  179 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCC
Confidence            88888888888888899999999999888899654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.4e-08  Score=83.74  Aligned_cols=109  Identities=15%  Similarity=0.176  Sum_probs=68.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .++||+|+||+|++|++++..|+..|.       +++++++++  +++....   .........++.-..++.++++++|
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~-------~V~~~~R~~--~~~~~~~---~~~~~~~~gD~~d~~~l~~al~~~d   69 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGY-------EVTVLVRDS--SRLPSEG---PRPAHVVVGDVLQAADVDKTVAGQD   69 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCG--GGSCSSS---CCCSEEEESCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEEcCh--hhccccc---ccccccccccccchhhHHHHhcCCC
Confidence            556999999999999999999998763       799999874  3332110   0000000001111124568899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      +||+++|........     ..+....+++++.+++..-+  ++|.+|
T Consensus        70 ~vi~~~g~~~~~~~~-----~~~~~~~~~l~~aa~~~~v~--r~i~~s  110 (205)
T d1hdoa_          70 AVIVLLGTRNDLSPT-----TVMSEGARNIVAAMKAHGVD--KVVACT  110 (205)
T ss_dssp             EEEECCCCTTCCSCC-----CHHHHHHHHHHHHHHHHTCC--EEEEEC
T ss_pred             EEEEEeccCCchhhh-----hhhHHHHHHHHHHHHhcCCC--eEEEEe
Confidence            999998865332222     23445677788888887643  466655

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.65  E-value=3.9e-08  Score=88.69  Aligned_cols=172  Identities=15%  Similarity=0.087  Sum_probs=100.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe----eCChhhhcC-
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA----TTDAVEACT-   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~----~~~~~~al~-   80 (332)
                      |||.||||+||+|++++..|+..+.       +|+++|+.....  +.....+.+.......-+..    ...+.++++ 
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~-------~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~   71 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGH-------DVIILDNLCNSK--RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD   71 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSCC--TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCCCcc--hhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc
Confidence            6899999999999999999998763       799998642111  11111122211111100111    112345555 


Q ss_pred             -CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH----HHHhCCCCCCCcE
Q 020022           81 -GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LKEFAPSIPAKNI  153 (332)
Q Consensus        81 -~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~----~~~~~~~~~~~~i  153 (332)
                       ++|+|||+|+.+..+  -.+..+.+..|+...+++.+.++++..+  ++|..|... +....    ..+..+...+...
T Consensus        72 ~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~--~~i~~Ss~~-vy~~~~~~~~~e~~~~~~p~~~  148 (338)
T d1udca_          72 HAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK--NFIFSSSAT-VYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             TTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEGG-GGCSCCSSSBCTTSCCCCCSSH
T ss_pred             cCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCC--EEEecCcce-EEccccccccccccccCCCcch
Confidence             789999999864311  1245677899999999999999998632  455554322 11000    0000011122345


Q ss_pred             EEechHHHHHHHHHHHH-HcCCCCCCeeeeEEEeccC
Q 020022          154 TCLTRLDHNRALGQISE-KLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       154 ~~~t~lds~r~~~~la~-~l~v~~~~v~~~~v~G~hg  189 (332)
                      ++.+.+...++....++ ..+.+..-++...|+|.+.
T Consensus       149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~  185 (338)
T d1udca_         149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHP  185 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCT
T ss_pred             HHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccC
Confidence            77788887776554444 4566666677777788755

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.61  E-value=1.8e-07  Score=78.30  Aligned_cols=114  Identities=15%  Similarity=0.186  Sum_probs=72.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--------------CccceEe
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--------------LLKGVVA   71 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--------------~~~~~~~   71 (332)
                      |||+||| .|+||.++|..|+..|.       +|..+|.++  ++.+.    +.....+              ...++..
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~-------~V~g~D~n~--~~i~~----ln~g~~p~~e~~~~~~l~~~~~~~~~~~   66 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGH-------EVIGVDVSS--TKIDL----INQGKSPIVEPGLEALLQQGRQTGRLSG   66 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTC-------EEEEECSCH--HHHHH----HHTTCCSSCCTTHHHHHHHHHHTTCEEE
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCC-------cEEEEeCCH--HHHHH----hcccCCcccchhhhhhhhhhhccccccc
Confidence            6999999 79999999999998763       899999984  33322    2221111              1246678


Q ss_pred             eCChhhhcCCCcEEEEeCCCCCCCCC-CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccch
Q 020022           72 TTDAVEACTGVNIAVMVGGFPRKEGM-ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTN  137 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~~~~~-~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~~  137 (332)
                      +++..+++++||+++++.+.|..... .....+.   .+.+.+...++... ++..+++- |-|....
T Consensus        67 ~~~~~~~i~~~d~i~i~VpTP~~~~~~~d~~~~~---~~~~~i~~~~~~~~-~~~liii~STv~pGtt  130 (202)
T d1mv8a2          67 TTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIE---TVCREIGFAIREKS-ERHTVVVRSTVLPGTV  130 (202)
T ss_dssp             ESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHH---HHHHHHHHHHTTCC-SCCEEEECSCCCTTHH
T ss_pred             CCCHHHHHhhCCEEEEecCccccccccccchhhh---hhhhhhhheeeccc-CCcceeeccccCCcch
Confidence            88999999999999999998854432 1111222   23334444444443 45555554 4455543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=98.60  E-value=2e-08  Score=91.51  Aligned_cols=170  Identities=10%  Similarity=0.006  Sum_probs=103.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc---hhhhhhhHHHHhhhhcCCccceEee-------CCh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA---AEALNGVKMELVDAAFPLLKGVVAT-------TDA   75 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~---~~~l~~~~~dl~~~~~~~~~~~~~~-------~~~   75 (332)
                      ++|.||||+||+|++++..|+..|.       +|+.+|+...   .++++.    +.+.......++...       ...
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-------~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~   70 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-------EVHGIKRRASSFNTERVDH----IYQDPHTCNPKFHLHYGDLSDTSNL   70 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEECC-------------------------CCEEECCCCSSCHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-------EEEEEECCCcccchhhHHH----HHhhhhhcCCCeEEEEeecCCHHHH
Confidence            4566999999999999999998763       7899997531   111111    111111111233221       123


Q ss_pred             hhhcCCC--cEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcC-CCeEEEEecCcccch---HHH-HHHhCC
Q 020022           76 VEACTGV--NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPANTN---ALI-LKEFAP  146 (332)
Q Consensus        76 ~~al~~a--DiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~-~~~~viv~tNP~~~~---~~~-~~~~~~  146 (332)
                      .+.++++  |+|+++|+.....  ..+....+..|+....++.+.+++++- +..++|.+|... +-   ... +.+- .
T Consensus        71 ~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~-vYG~~~~~~~~E~-~  148 (357)
T d1db3a_          71 TRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE-LYGLVQEIPQKET-T  148 (357)
T ss_dssp             HHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GGTTCCSSSBCTT-S
T ss_pred             HHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchh-hhCCCCCCCcCCC-C
Confidence            4555555  9999999875422  345667778899999999999988753 234566655321 10   000 0010 1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      -+.|...++.+.+....+...+++..+++..-++...|+|..
T Consensus       149 ~~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~  190 (357)
T d1db3a_         149 PFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPR  190 (357)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCC
Confidence            122344678888888888888889999988888877778864

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=98.57  E-value=1.3e-07  Score=77.45  Aligned_cols=101  Identities=14%  Similarity=0.058  Sum_probs=66.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh--cCC----ccceEeeCChhhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FPL----LKGVVATTDAVEA   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~--~~~----~~~~~~~~~~~~a   78 (332)
                      ++||+||| +|.+|+.++..|...|.       ++.+||+++  ++++.... .....  .+.    ......+++..++
T Consensus         1 sk~iaIiG-aG~~G~~~A~~l~~~G~-------~V~~~~r~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~   69 (184)
T d1bg6a2           1 SKTYAVLG-LGNGGHAFAAYLALKGQ-------SVLAWDIDA--QRIKEIQD-RGAIIAEGPGLAGTAHPDLLTSDIGLA   69 (184)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHH-HTSEEEESSSCCEEECCSEEESCHHHH
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHH-cCCCchhhhhhhhhhhhhhhhhhhHhH
Confidence            36999999 69999999999999874       899999974  33332111 11000  011    1233456788999


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +++||+||++....                ..++++++++.+-.++.+|+...|
T Consensus        70 ~~~aD~iii~v~~~----------------~~~~~~~~i~~~l~~~~~iv~~~g  107 (184)
T d1bg6a2          70 VKDADVILIVVPAI----------------HHASIAANIASYISEGQLIILNPG  107 (184)
T ss_dssp             HTTCSEEEECSCGG----------------GHHHHHHHHGGGCCTTCEEEESSC
T ss_pred             hcCCCEEEEEEchh----------------HHHHHHHHhhhccCCCCEEEEeCC
Confidence            99999999984211                244677777877767765544433

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.54  E-value=2.7e-07  Score=74.48  Aligned_cols=92  Identities=20%  Similarity=0.211  Sum_probs=59.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.||+.++..|...|.       +|..||+++  +.++ .+.+.  ..      +....+..+++++||+|
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~-------~V~~~d~~~--~~~~-~a~~~--~~------~~~~~~~~~~~~~~DiI   61 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGH-------YLIGVSRQQ--STCE-KAVER--QL------VDEAGQDLSLLQTAKII   61 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHH-HHHHT--TS------CSEEESCGGGGTTCSEE
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCC-------EEEEEECCc--hHHH-HHHHh--hc------cceeeeecccccccccc
Confidence            6999999 79999999999988763       899999874  2222 11111  10      00122445789999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |++.  |              ...+.++.+.+..+.+++.+|+..++
T Consensus        62 ilav--p--------------~~~~~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          62 FLCT--P--------------IQLILPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             EECS--C--------------HHHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             cccC--c--------------Hhhhhhhhhhhhhhcccccceeeccc
Confidence            9874  2              13344666677776666765554443

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=1.1e-07  Score=81.30  Aligned_cols=115  Identities=11%  Similarity=0.142  Sum_probs=74.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.+||.|+||+|++|++++..|+..+.+.     +|.++++++.  ......  ....... ..++.-..+..++++++|
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~-----~v~~~~R~~~--~~~~~~--~~~i~~~-~~D~~~~~~~~~~~~~~d   82 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFS-----KVTLIGRRKL--TFDEEA--YKNVNQE-VVDFEKLDDYASAFQGHD   82 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCS-----EEEEEESSCC--CCCSGG--GGGCEEE-ECCGGGGGGGGGGGSSCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCC-----EEEEEecChh--hhcccc--cceeeee-eecccccccccccccccc
Confidence            45699999999999999999999887544     7888888642  111100  0000000 001111135678899999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      +||+++|... ...+..++...|.....++++...+... . +++.+|
T Consensus        83 ~vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~v-~-~fi~~S  127 (232)
T d2bkaa1          83 VGFCCLGTTR-GKAGAEGFVRVDRDYVLKSAELAKAGGC-K-HFNLLS  127 (232)
T ss_dssp             EEEECCCCCH-HHHHHHHHHHHHTHHHHHHHHHHHHTTC-C-EEEEEC
T ss_pred             cccccccccc-cccchhhhhhhcccccceeeecccccCc-c-ccccCC
Confidence            9999988652 1223455667888899999998877653 2 455555

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.49  E-value=9.8e-08  Score=87.70  Aligned_cols=176  Identities=13%  Similarity=0.182  Sum_probs=102.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch--------hh---hhhhHHHHhhhhcCCccceEe-eC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--------EA---LNGVKMELVDAAFPLLKGVVA-TT   73 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~--------~~---l~~~~~dl~~~~~~~~~~~~~-~~   73 (332)
                      |||.||||+||+|++++..|++.|.       +|+.+|.-...        ..   .......+.........++.. ..
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~-------~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~   74 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNY-------EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVG   74 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEc
Confidence            6999999999999999999998873       79999832100        00   000000000000000112221 11


Q ss_pred             C------hhhhcCC--CcEEEEeCCCCCCC--CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH-H
Q 020022           74 D------AVEACTG--VNIAVMVGGFPRKE--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-L  139 (332)
Q Consensus        74 ~------~~~al~~--aDiVi~~ag~~~~~--~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~-~  139 (332)
                      |      ..+++++  .|+|+|+|+....+  ..+   ..+....|+....++.+.+.+++. ..+++..|....... .
T Consensus        75 Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~-~~~~i~~ss~~~~~~~~  153 (393)
T d1i24a_          75 DICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGTMGEYGTPN  153 (393)
T ss_dssp             CTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECCGGGGCCCS
T ss_pred             cCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhcc-ccceeeccccccccccc
Confidence            2      2345554  49999999865311  122   235668899999999999999974 455555553221100 0


Q ss_pred             H--HHHhC----C--------CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          140 I--LKEFA----P--------SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       140 ~--~~~~~----~--------~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      .  ...+.    .        -..+...++.+.+....+...+++..+++...++...|+|...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~  217 (393)
T d1i24a_         154 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKT  217 (393)
T ss_dssp             SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCC
T ss_pred             cccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCc
Confidence            0  00000    0        0112234677888888888888899999988899888888543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=98.47  E-value=2e-07  Score=77.28  Aligned_cols=74  Identities=20%  Similarity=0.258  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh------cCCccceEeeCChhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA------FPLLKGVVATTDAVE   77 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~------~~~~~~~~~~~~~~~   77 (332)
                      .+.||+|+| +|..|+++|..|...+.       +|.|+++++  +.++....  .+..      ..+..++..++++.+
T Consensus         6 ~m~KI~ViG-aG~wGtAlA~~La~~g~-------~V~l~~r~~--~~~~~i~~--~~~n~~yl~~~~l~~~i~~t~~l~~   73 (189)
T d1n1ea2           6 YLNKAVVFG-SGAFGTALAMVLSKKCR-------EVCVWHMNE--EEVRLVNE--KRENVLFLKGVQLASNITFTSDVEK   73 (189)
T ss_dssp             CEEEEEEEC-CSHHHHHHHHHHHTTEE-------EEEEECSCH--HHHHHHHH--HTBCTTTSTTCBCCTTEEEESCHHH
T ss_pred             eeceEEEEC-CCHHHHHHHHHHHHcCC-------eEEEEEecH--HHHHHHhh--cccccccccccccccccccchhhhh
Confidence            345899999 69999999999998763       799999874  33322111  1111      123468889999999


Q ss_pred             hcCCCcEEEEeC
Q 020022           78 ACTGVNIAVMVG   89 (332)
Q Consensus        78 al~~aDiVi~~a   89 (332)
                      ++++||+||++.
T Consensus        74 a~~~ad~iiiav   85 (189)
T d1n1ea2          74 AYNGAEIILFVI   85 (189)
T ss_dssp             HHTTCSCEEECS
T ss_pred             ccCCCCEEEEcC
Confidence            999999999984

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.46  E-value=1.2e-07  Score=85.40  Aligned_cols=170  Identities=13%  Similarity=0.081  Sum_probs=100.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC-hhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD-AVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~-~~~al~~aDi   84 (332)
                      |||.||||+|++|++++..|+..+.      .+|+.+|+...  ... ...+.....+ ...+++...+ .+.+.+++|+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~------~~V~~ld~~~~--~~~-~~~~~~~~~~-i~~Di~~~~~~~~~~~~~~d~   70 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDH------YEVYGLDIGSD--AIS-RFLNHPHFHF-VEGDISIHSEWIEYHVKKCDV   70 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTT------CEEEEEESCCG--GGG-GGTTCTTEEE-EECCTTTCSHHHHHHHHHCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC------CEEEEEeCCCc--chh-hhccCCCeEE-EECccCChHHHHHHHHhCCCc
Confidence            5999999999999999999987652      17888887631  111 0011000000 0001111111 2236778999


Q ss_pred             EEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH---HHHHHhCC------CCCCCcE
Q 020022           85 AVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA---LILKEFAP------SIPAKNI  153 (332)
Q Consensus        85 Vi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~---~~~~~~~~------~~~~~~i  153 (332)
                      |||+|+......  ......+..|+....++++.+.+.. .  ..++++.....-.   .......+      -..++..
T Consensus        71 Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~--~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  147 (342)
T d2blla1          71 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K--RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI  147 (342)
T ss_dssp             EEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-C--EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGH
T ss_pred             cccccccccccccccCCcccccccccccccccccccccc-c--cccccccccccccccccccccccccccccccCCCcch
Confidence            999998754222  2334667899999999999998875 2  3344442211000   00000000      0112235


Q ss_pred             EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022          154 TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       154 ~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h  188 (332)
                      ++.+.+...++....++..|++..-++...+.|..
T Consensus       148 Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~  182 (342)
T d2blla1         148 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPR  182 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSS
T ss_pred             hhhcccchhhhhhhhhcccCceeEEeecccccccc
Confidence            77788888899889999999987777666655643

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.46  E-value=4e-08  Score=88.89  Aligned_cols=169  Identities=14%  Similarity=0.058  Sum_probs=103.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-------eCChhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-------TTDAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-------~~~~~~   77 (332)
                      +|||.||||+||||++++..|+..|.     .+.+..+|......    ....+....   ..++..       .....+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~-----~v~v~~~d~~~~~~----~~~~~~~~~---~~~i~~~~~Di~d~~~~~~   69 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHP-----DVHVTVLDKLTYAG----NKANLEAIL---GDRVELVVGDIADAELVDK   69 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCT-----TCEEEEEECCCTTC----CGGGTGGGC---SSSEEEEECCTTCHHHHHH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCC-----CeEEEEEeCCCccc----cHHHHHHhh---cCCeEEEEccCCCHHHHHH
Confidence            57999999999999999999998763     12455666422100    001111110   111111       123456


Q ss_pred             hcCCCcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH-HHHh----------
Q 020022           78 ACTGVNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI-LKEF----------  144 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~-~~~~----------  144 (332)
                      +++++|.|++.|+......  .+..+.+..|+.....+.....+.. .  ++++++.-. +.... ..+.          
T Consensus        70 ~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~--k~i~~ss~~-vyg~~~~~~~~~~~~~~~~~  145 (346)
T d1oc2a_          70 LAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I--RFHHVSTDE-VYGDLPLREDLPGHGEGPGE  145 (346)
T ss_dssp             HHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C--EEEEEEEGG-GGCCBCCGGGSTTTTCSTTS
T ss_pred             HHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc-c--cccccccce-EecccCccccccccccCccc
Confidence            7889999999987654221  2335677889999999999998886 3  334443111 10000 0000          


Q ss_pred             ----CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          145 ----APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       145 ----~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                          .+...|...++.+.+...++....++..+++..-++...|+|.+.
T Consensus       146 ~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~  194 (346)
T d1oc2a_         146 KFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ  194 (346)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC
T ss_pred             ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCC
Confidence                001112345778888888888888899999988899888889644

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.44  E-value=1.6e-07  Score=85.98  Aligned_cols=176  Identities=17%  Similarity=0.143  Sum_probs=103.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc----h---hhhhhhHHHHhhhhcC----CccceEe-eC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA----A---EALNGVKMELVDAAFP----LLKGVVA-TT   73 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~----~---~~l~~~~~dl~~~~~~----~~~~~~~-~~   73 (332)
                      |||.||||+||+|++++..|++.+-      .+|+.+|.-..    .   +..+.....+......    ....+.+ ..
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~------~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTN------HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVG   76 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCC------CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEES
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCC------CEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEEC
Confidence            5999999999999999999886321      17899984110    0   1111111122221111    1122222 22


Q ss_pred             Ch------hh---hcCCCcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc----hH
Q 020022           74 DA------VE---ACTGVNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT----NA  138 (332)
Q Consensus        74 ~~------~~---al~~aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~----~~  138 (332)
                      |.      .+   ..+++|+|+|+|+......  .........|+....++.....+...+  .++..+.....    .-
T Consensus        77 Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~--~~~~~~s~~~~~~~~~~  154 (383)
T d1gy8a_          77 DVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCD--KIIFSSSAAIFGNPTMG  154 (383)
T ss_dssp             CTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEEEEGGGTBSCCC-
T ss_pred             cccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCc--ccccccccccccccccc
Confidence            21      22   3357899999998653211  234455678999999999999988743  23333322211    00


Q ss_pred             HHHHHhC-----CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          139 LILKEFA-----PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       139 ~~~~~~~-----~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      .......     .-..|...++.+.+...++...+++..|++...++...++|...
T Consensus       155 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~  210 (383)
T d1gy8a_         155 SVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE  210 (383)
T ss_dssp             ----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred             cccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCc
Confidence            0000000     01223446778888888888888999999999999888888544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.42  E-value=2.6e-07  Score=75.90  Aligned_cols=101  Identities=10%  Similarity=0.044  Sum_probs=64.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--C-CccceEeeCChhhhcCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--P-LLKGVVATTDAVEACTGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~-~~~~~~~~~~~~~al~~a   82 (332)
                      |||+||| +|.+|+++|..|...+.       ++.|+.+..+++..+.....-.+...  . ....+..+++..+++++|
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~-------~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~a   72 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGN-------EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENA   72 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCC-------EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhcc
Confidence            6999999 69999999999998753       79999875433322221111011111  1 123456677888999999


Q ss_pred             cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      |+||++.-                ...++++++++..+-.+ ..+++.+
T Consensus        73 d~Ii~avp----------------s~~~~~~~~~l~~~l~~-~~ii~~t  104 (180)
T d1txga2          73 EVVLLGVS----------------TDGVLPVMSRILPYLKD-QYIVLIS  104 (180)
T ss_dssp             SEEEECSC----------------GGGHHHHHHHHTTTCCS-CEEEECC
T ss_pred             chhhcccc----------------hhhhHHHHHhhcccccc-ceecccc
Confidence            99999742                12355677777777644 4455554

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.39  E-value=1.6e-07  Score=83.91  Aligned_cols=181  Identities=14%  Similarity=0.087  Sum_probs=110.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-e------CChhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-T------TDAVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~------~~~~~a   78 (332)
                      |||.|+||+|++|++++..|+..|.-- ....++..+|......    ....+.....  ..++.. .      ......
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v-~~~~~i~~~d~~~~~~----~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~   73 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPD-VPADEVIVLDSLTYAG----NRANLAPVDA--DPRLRFVHGDIRDAGLLARE   73 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTT-SCCSEEEEEECCCTTC----CGGGGGGGTT--CTTEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCc-cCCceEEEEeCCCccc----cHhHhhhhhc--CCCeEEEEeccccchhhhcc
Confidence            599999999999999999999876411 1111677787542111    1111111110  011111 1      123456


Q ss_pred             cCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH---HHHHhCCCCCCCcE
Q 020022           79 CTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL---ILKEFAPSIPAKNI  153 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~---~~~~~~~~~~~~~i  153 (332)
                      ..+.|+|+++|+.+...  .....+.+..|+.....+.+.+.++..+  ++|..|...-.-..   -..+- .-..|...
T Consensus        74 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~--~~I~~Ss~~~yg~~~~~~~~E~-~~~~p~~~  150 (322)
T d1r6da_          74 LRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG--RVVHVSTNQVYGSIDSGSWTES-SPLEPNSP  150 (322)
T ss_dssp             TTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCC--EEEEEEEGGGGCCCSSSCBCTT-SCCCCCSH
T ss_pred             ccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCc--eEEEeecceeecCCCCCCCCCC-CCCCCCCH
Confidence            78999999998765422  1233466788999999999999988643  56666532110000   00000 01223345


Q ss_pred             EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC--CceeecC
Q 020022          154 TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS--SSQYPDV  196 (332)
Q Consensus       154 ~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg--~~~v~~~  196 (332)
                      ++.+......+...+++..+++...++...|+|.+.  +..+|.|
T Consensus       151 Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~  195 (322)
T d1r6da_         151 YAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLF  195 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHH
Confidence            777888888888888999999999999888899643  3345543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.37  E-value=5e-08  Score=89.05  Aligned_cols=178  Identities=12%  Similarity=0.073  Sum_probs=105.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC------hhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD------AVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~------~~~a   78 (332)
                      |||.||||+|++|++++..|+..+. .     .+.++|.......    ...+.+..  ...++.. ..|      ..+.
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~-~-----vv~~~d~~~~~~~----~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~   68 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQ-D-----TVVNIDKLTYAGN----LESLSDIS--ESNRYNFEHADICDSAEITRI   68 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCS-C-----EEEEEECCCTTCC----GGGGTTTT--TCTTEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-C-----EEEEEeCCCcccc----HHHHHhhh--hcCCcEEEEccCCCHHHHHHH
Confidence            5999999999999999999998763 1     4778886431111    11122211  1122322 112      2233


Q ss_pred             cC--CCcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCC-------CeEEEEecCcccchH-----HHHH
Q 020022           79 CT--GVNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAP-------NCKVLVVANPANTNA-----LILK  142 (332)
Q Consensus        79 l~--~aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~-------~~~viv~tNP~~~~~-----~~~~  142 (332)
                      ++  +.|+||++|+.+..+.  .+..+.+..|+....++.+.+.++...       ..++|..|.-. +..     ..-.
T Consensus        69 ~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~  147 (361)
T d1kewa_          69 FEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE-VYGDLPHPDEVE  147 (361)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG-GGCCCCCGGGSC
T ss_pred             HHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccce-eeCCCccCCccc
Confidence            33  5799999987643111  133456788888888888887765311       12455554311 100     0000


Q ss_pred             Hh--------CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC--ceeecC
Q 020022          143 EF--------APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS--SQYPDV  196 (332)
Q Consensus       143 ~~--------~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~--~~v~~~  196 (332)
                      ..        ..-..|...++.+.+...++...+++..+++...++...|+|.++.  +.+|.+
T Consensus       148 ~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~  211 (361)
T d1kewa_         148 NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLV  211 (361)
T ss_dssp             TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHH
T ss_pred             cccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHH
Confidence            00        0001223457888899999988889999999999999999997663  345543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.36  E-value=4.6e-07  Score=80.27  Aligned_cols=157  Identities=13%  Similarity=0.178  Sum_probs=99.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh--cCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA--CTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a--l~~a   82 (332)
                      ++||.||||+|++|++++..|++.+.       ++++.|....        .|+.+..           ...+.  -.+.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~-------~vi~~~~~~~--------~~~~~~~-----------~~~~~~~~~~~   55 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGD-------VELVLRTRDE--------LNLLDSR-----------AVHDFFASERI   55 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT-------EEEECCCTTT--------CCTTCHH-----------HHHHHHHHHCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcC-------EEEEecCchh--------ccccCHH-----------HHHHHHhhcCC
Confidence            35999999999999999999998763       4556665421        1121111           00111  1357


Q ss_pred             cEEEEeCCCCCCC---CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH----HHH-hCCC---CCCC
Q 020022           83 NIAVMVGGFPRKE---GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LKE-FAPS---IPAK  151 (332)
Q Consensus        83 DiVi~~ag~~~~~---~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~----~~~-~~~~---~~~~  151 (332)
                      |+|+++|+.....   .....+.+..|+....++.+.+.++..+  ++|++|. +.+....    +.+ ....   .+++
T Consensus        56 d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~--~~i~~SS-~~vyg~~~~~~~~E~~~~~~~~~~~~  132 (315)
T d1e6ua_          56 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVN--KLLFLGS-SCIYPKLAKQPMAESELLQGTLEPTN  132 (315)
T ss_dssp             SEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEECC-GGGSCTTCCSSBCGGGTTSSCCCGGG
T ss_pred             CEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEECC-ceEcCCCCCCCccCCccccCCCCCCC
Confidence            8999988654211   1245567788999999999999887632  4665553 2211000    000 0000   1122


Q ss_pred             cEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC
Q 020022          152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS  190 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~  190 (332)
                      ..++.+.+...++...+++..|++..-++...|+|.++.
T Consensus       133 ~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~  171 (315)
T d1e6ua_         133 EPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDN  171 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCC
Confidence            357888899889888888998999899998888997653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.33  E-value=2.2e-07  Score=82.76  Aligned_cols=173  Identities=12%  Similarity=0.105  Sum_probs=95.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cCC-ccceEeeCChhhhcCCC--
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPL-LKGVVATTDAVEACTGV--   82 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~~-~~~~~~~~~~~~al~~a--   82 (332)
                      ||.||||+||+|++++..|+..|.       +|+.+|.-....... ....+.... ..+ ...+.-.....++++++  
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-------~V~~id~~~~~~~~~-~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-------DLIVFDNLSRKGATD-NLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCSTTHHH-HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-------EEEEEECCCcccchh-HHHHhhccCCcEEEEcccCCHHHHHHHHHhcCC
Confidence            899999999999999999998764       788888432111111 101111110 000 00111111235566655  


Q ss_pred             cEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH--H---------------HH
Q 020022           83 NIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI--L---------------KE  143 (332)
Q Consensus        83 DiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~--~---------------~~  143 (332)
                      |+|||+|+......  .+..+....|+...+.+.+...+...+ -.++..|. .......  .               ..
T Consensus        74 d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-~~i~~sS~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (338)
T d1orra_          74 DSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN-CNIIYSST-NKVYGDLEQYKYNETETRYTCVDKPNG  151 (338)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEEEEE-GGGGTTCTTSCEEECSSCEEETTCTTC
T ss_pred             ceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccccc-cccccccc-ccccccccccccccccccccccccccC
Confidence            99999987653221  244677889999999999999998744 33433332 1110000  0               00


Q ss_pred             --hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          144 --FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       144 --~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                        ..+.+.+...++.+......+....++..+.....+....++|.++
T Consensus       152 ~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (338)
T d1orra_         152 YDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQ  199 (338)
T ss_dssp             BCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTC
T ss_pred             cccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccc
Confidence              0000111223444555556666667777777766666555566544

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.25  E-value=6.9e-07  Score=71.68  Aligned_cols=101  Identities=12%  Similarity=0.129  Sum_probs=66.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+|+| +|.+|+.++..|...|.       ++.++++++  +.....  ...... ..........+..+++.++|+|
T Consensus         1 MkI~IiG-aG~iG~~~a~~L~~~G~-------~V~~~~r~~--~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~D~i   67 (167)
T d1ks9a2           1 MKITVLG-CGALGQLWLTALCKQGH-------EVQGWLRVP--QPYCSV--NLVETD-GSIFNESLTANDPDFLATSDLL   67 (167)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSC--CSEEEE--EEECTT-SCEEEEEEEESCHHHHHTCSEE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHCCC-------ceEEEEcCH--HHhhhh--ccccCC-ccccccccccchhhhhcccceE
Confidence            6999999 69999999999998763       899999985  222211  111111 1111223344567888999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      |++....                -..+..+.+..+-.++..|+.+.|=++
T Consensus        68 ii~vka~----------------~~~~~~~~l~~~~~~~~~Iv~~qNG~~  101 (167)
T d1ks9a2          68 LVTLKAW----------------QVSDAVKSLASTLPVTTPILLIHNGMG  101 (167)
T ss_dssp             EECSCGG----------------GHHHHHHHHHTTSCTTSCEEEECSSSC
T ss_pred             EEeeccc----------------chHHHHHhhccccCcccEEeeccCccc
Confidence            9985322                133556666666556777888888654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.21  E-value=6.6e-06  Score=73.58  Aligned_cols=171  Identities=16%  Similarity=0.106  Sum_probs=106.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc--hhhhhhhHHHHhhhhcCCccceEee-C------C
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--AEALNGVKMELVDAAFPLLKGVVAT-T------D   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~--~~~l~~~~~dl~~~~~~~~~~~~~~-~------~   74 (332)
                      ++++|.||||+|++|++++..|.+.|.       +|..+|+...  ...... ...+....  ...++... .      .
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-------~V~~~d~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~d~~d~~~   84 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQ-------KVVGLDNFATGHQRNLDE-VRSLVSEK--QWSNFKFIQGDIRNLDD   84 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSSCCHHHHHH-HHHHSCHH--HHTTEEEEECCTTSHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC-------EEEEEECCCCcchhhHHH-HHHhhhhc--ccCCeeEEeeccccccc
Confidence            467999999999999999999998763       7888886321  111110 01110000  00111111 1      1


Q ss_pred             hhhhcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH------HHhCC
Q 020022           75 AVEACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL------KEFAP  146 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~------~~~~~  146 (332)
                      ......+.|.|++++.....+  ..+....+..|+.....+.+.+.+... . ++|..|... +  |--      .+-.+
T Consensus        85 ~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~-~~i~~SS~~-v--yg~~~~~~~~E~~~  159 (341)
T d1sb8a_          85 CNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV-Q-SFTYAASSS-T--YGDHPGLPKVEDTI  159 (341)
T ss_dssp             HHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-S-EEEEEEEGG-G--GTTCCCSSBCTTCC
T ss_pred             cccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCC-c-eEEEcccce-e--eCCCCCCCccCCCC
Confidence            234567889999987654311  234456778899999999999998763 3 455554211 1  100      00001


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS  190 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~  190 (332)
                       ..|...++.+.+...++...+++..+++..-++...|+|.+++
T Consensus       160 -~~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~  202 (341)
T d1sb8a_         160 -GKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD  202 (341)
T ss_dssp             -CCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCC
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcC
Confidence             1223467888999889988889999999888887767887653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.20  E-value=2.2e-06  Score=68.85  Aligned_cols=64  Identities=19%  Similarity=0.306  Sum_probs=48.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| .|.||+.+|..|+..|.       ++..||+++  ++++    ++...      ......+..+++++||+|
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~-------~V~~~d~~~--~~~~----~~~~~------~~~~~~~~~e~~~~~d~i   60 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGY-------SLVVSDRNP--EAIA----DVIAA------GAETASTAKAIAEQCDVI   60 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTC-------EEEEECSCH--HHHH----HHHHT------TCEECSSHHHHHHHCSEE
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCC-------eEEEEeCCc--chhH----HHHHh------hhhhcccHHHHHhCCCeE
Confidence            5999999 89999999999998764       899999984  3332    22221      122345678889999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        61 i~~v   64 (161)
T d1vpda2          61 ITML   64 (161)
T ss_dssp             EECC
T ss_pred             EEEc
Confidence            9984

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.19  E-value=5.2e-07  Score=78.69  Aligned_cols=100  Identities=18%  Similarity=0.185  Sum_probs=65.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--CCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~aD   83 (332)
                      |||.|+||+|++|++++..|...+        +++.+|....  .   ...|+.+..           ...+.++  +.|
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g--------~~v~~~~~~~--~---~~~Dl~~~~-----------~~~~~i~~~~~D   56 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVG--------NLIALDVHSK--E---FCGDFSNPK-----------GVAETVRKLRPD   56 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTS--------EEEEECTTCS--S---SCCCTTCHH-----------HHHHHHHHHCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC--------CEEEEECCCc--c---ccCcCCCHH-----------HHHHHHHHcCCC
Confidence            699999999999999999887654        4566666531  1   112332221           2334444  359


Q ss_pred             EEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           84 IAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        84 iVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      +|||+||....  ...........|......+....++.+   .+++++|.
T Consensus        57 ~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~~ss  104 (298)
T d1n2sa_          57 VIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG---AWVVHYST  104 (298)
T ss_dssp             EEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT---CEEEEEEE
T ss_pred             EEEEecccccccccccCccccccccccccccchhhhhccc---cccccccc
Confidence            99999986531  123455667888888888888887664   34555553

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=3.7e-06  Score=75.42  Aligned_cols=179  Identities=13%  Similarity=0.039  Sum_probs=95.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch----hhhhhhHHHHhhhhcCCccceEee-C---Chhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA----EALNGVKMELVDAAFPLLKGVVAT-T---DAVE   77 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~----~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~~   77 (332)
                      +||.||||+||+|++++..|+..|.       +|+.+|.....    .........+.........-+... +   ...+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-------~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~   75 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-------LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR   75 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-------CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-------EEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccc
Confidence            5899999999999999999998763       68888742110    001000111111111111001111 1   1234


Q ss_pred             hcC--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH--HHHhC-CCCCC
Q 020022           78 ACT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI--LKEFA-PSIPA  150 (332)
Q Consensus        78 al~--~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~--~~~~~-~~~~~  150 (332)
                      ++.  +.|+|+++|+.+...  .....+.+..|+.....+...++++..+  .+++.|.....-..-  ..... +...+
T Consensus        76 ~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~--~~i~~ss~~~~~~~~~~~~~~~~~~~~~  153 (346)
T d1ek6a_          76 LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK--NLVFSSSATVYGNPQYLPLDEAHPTGGC  153 (346)
T ss_dssp             HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             cccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcc--cccccccceeeecccccccccccccccc
Confidence            444  445788888865311  1234566788999999999999887643  355554221110000  00000 00111


Q ss_pred             CcEEEechHHHHHHHHHHHHH-cCCCCCCeeeeEEEeccCCcee
Q 020022          151 KNITCLTRLDHNRALGQISEK-LNVQVSDVKNVIIWGNHSSSQY  193 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~-l~v~~~~v~~~~v~G~hg~~~v  193 (332)
                      ...++.+.+-..+....+++. .+.+...++...++|.+....+
T Consensus       154 ~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~  197 (346)
T d1ek6a_         154 TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCI  197 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSC
T ss_pred             CChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCc
Confidence            224555555555555555554 5777777777777887665433

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.17  E-value=2.3e-06  Score=71.47  Aligned_cols=108  Identities=22%  Similarity=0.165  Sum_probs=68.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh--hhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE--ALNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~--~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      .++||+|+||+|++|++++..|+..+...     +|....+++..+  ++.....|+.+             .......+
T Consensus         1 t~KkIlItGatG~iG~~lv~~L~~~~~~~-----~v~~~~r~~~~~~~~~~~~~~d~~~-------------~~~~~~~~   62 (212)
T d2a35a1           1 TPKRVLLAGATGLTGEHLLDRILSEPTLA-----KVIAPARKALAEHPRLDNPVGPLAE-------------LLPQLDGS   62 (212)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCC-----EEECCBSSCCCCCTTEECCBSCHHH-------------HGGGCCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeE-----EEEEEeCCchhhcccccccccchhh-------------hhhccccc
Confidence            36899999999999999999998876422     455554432110  11111111111             01222346


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      +|.||+++|..........++...|......+++..++...  ..++.+|
T Consensus        63 ~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v--~~~i~~S  110 (212)
T d2a35a1          63 IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGA--RHYLVVS  110 (212)
T ss_dssp             CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTC--CEEEEEC
T ss_pred             hheeeeeeeeeccccccccccccchhhhhhhcccccccccc--ccccccc
Confidence            79999998876444445567778888988999998887653  3466665

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.17  E-value=1.6e-05  Score=71.10  Aligned_cols=114  Identities=14%  Similarity=0.106  Sum_probs=72.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc------cceEeeCChhhhc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL------KGVVATTDAVEAC   79 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~------~~~~~~~~~~~al   79 (332)
                      +||+||||+|++|++++..|++.|.       +|+...++.  .+...... +.+......      ..+.-.....+++
T Consensus        12 k~VlVTG~sGfIGs~l~~~Ll~~G~-------~V~~~vR~~--~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1          12 SLVLVTGANGFVASHVVEQLLEHGY-------KVRGTARSA--SKLANLQK-RWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHH-HHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEeCCc--hhHHHHHH-hhhccccccccEEEeccccchhhhhhhc
Confidence            6999999999999999999998764       666555542  22221111 111111000      0111112345789


Q ss_pred             CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      .++|.|++.++... ...+...+...|+....++.+.+.++.. -.++++.|
T Consensus        82 ~~~~~v~~~a~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~-v~~~i~~S  131 (342)
T d1y1pa1          82 KGAAGVAHIASVVS-FSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTS  131 (342)
T ss_dssp             TTCSEEEECCCCCS-CCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEEC
T ss_pred             ccchhhhhhccccc-ccccccccccchhhhHHHHHHhhhcccc-cccccccc
Confidence            99999999987653 3445666777899999999999988742 23455544

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.13  E-value=4.8e-07  Score=80.92  Aligned_cols=172  Identities=10%  Similarity=-0.038  Sum_probs=97.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc---hhhhhhhHHHHhhhhcCCccceEee-CC------h
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA---AEALNGVKMELVDAAFPLLKGVVAT-TD------A   75 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~---~~~l~~~~~dl~~~~~~~~~~~~~~-~~------~   75 (332)
                      +|+.||||+|++|++++..|+..|.       +|+.+|+..+   .+++.....+.....   ...+... .|      .
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Di~~~~~~   71 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-------EVHGLIRRSSNFNTQRINHIYIDPHNVN---KALMKLHYADLTDASSL   71 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCSSCCCTTTTTTC-----------CCEEEEECCTTCHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-------EEEEEECCCcccchhhhhhhhhhhhhcc---ccceEEEEccccCHHHH
Confidence            6899999999999999999999874       7999997531   112211111111111   1112111 11      2


Q ss_pred             hhhc--CCCcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhc---CCCeEEEEecCcccchHHH---HHHhC
Q 020022           76 VEAC--TGVNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANTNALI---LKEFA  145 (332)
Q Consensus        76 ~~al--~~aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~---~~~~~viv~tNP~~~~~~~---~~~~~  145 (332)
                      ..++  .+.|+||++|+......  .+.......|......+...+++.+   ....++ +.+..+......   ..+. 
T Consensus        72 ~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~ss~~~~~~~~~~~~E~-  149 (339)
T d1n7ha_          72 RRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKY-YQAGSSEMFGSTPPPQSET-  149 (339)
T ss_dssp             HHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEE-EEEEEGGGGTTSCSSBCTT-
T ss_pred             HHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceee-eecccceecccCCCCCCCC-
Confidence            2223  36699999998653211  2334556677766666666665432   122233 333222110000   0000 


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      .-+.|...++.+.+.+..+....++..+++...++...|+|.++
T Consensus       150 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~  193 (339)
T d1n7ha_         150 TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR  193 (339)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             CCCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCC
Confidence            01223446788888888888888899999888888887889754

>d1up7a2 d.162.1.2 (A:163-415) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.13  E-value=1.8e-05  Score=68.18  Aligned_cols=141  Identities=21%  Similarity=0.277  Sum_probs=94.4

Q ss_pred             HHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCCCcchhhhhhh-----------cccch---------
Q 020022          163 RALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVRELVKD-----------DAWLN---------  221 (332)
Q Consensus       163 r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~-----------~~~~~---------  221 (332)
                      .+.+.+|+.+|++.++|+.-+ .| ||.    .|+.+++.    +|+++...+.+           ..|..         
T Consensus         5 ~~~~~la~~lg~~~~~v~~~~-~GlNH~----~w~~~~~~----~G~D~~p~l~~~~~~~~~~~~~~~~~~~~~~~~g~~   75 (253)
T d1up7a2           5 NFIREIAEMFSARLEDVFLKY-YGLNHL----SFIEKVFV----KGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLI   75 (253)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEE-EEETTE----EEEEEEEE----TTEECHHHHHHHHTTC---CCTTSCCHHHHHHHCSE
T ss_pred             HHHHHHHHHhCCCHHHcEEEE-EEECCh----hheEeeEE----CCEechHHHHHHHHHhccCCccccCcHHHHHhcCee
Confidence            568899999999999999665 68 787    88999988    67766543311           01100         


Q ss_pred             -----------hHHHHHHHh---hHHHHHHh--------------------cCccchHHHHHHHHHHHHHHHcCCCCceE
Q 020022          222 -----------GEFITTVQQ---RGAAIIKA--------------------RKLSSALSAASSACDHIRDWVLGTPEGTW  267 (332)
Q Consensus       222 -----------~~~~~~v~~---~~~~i~~~--------------------kg~~~~~~~a~~~~~~i~~~i~~~~~~~i  267 (332)
                                 ++..+....   ++.++...                    ++ ....+  ..++.+|. ++.+| ++.+
T Consensus        76 p~~Yl~Yy~~~~~~~~~~~~~~tra~~v~~~e~~~~~~~~~~~~~~~~~~~~~-~~~~~--e~a~~ii~-ai~~~-~~~~  150 (253)
T d1up7a2          76 VNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRG-GSMYS--TAAAHLIR-DLETD-EGKI  150 (253)
T ss_dssp             ECGGGHHHHTHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTCSSCCGGGGGST-TTTHH--HHHHHHHH-HHHSS-SCEE
T ss_pred             EcccchhhcCcHHHHHHhccccChHHHHHHHHHHHHHHHHHHhhhhhhhhhcc-CcchH--HHHHHHHH-HHHcC-CCcE
Confidence                       111111111   11122111                    11 12222  45677665 47777 7889


Q ss_pred             EEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          268 VSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       268 ~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      +.++|..+|. -|+|.|+++.+||++ ++|+..+-. .+|.+....+++.-..
T Consensus       151 ~~vNv~N~G~I~~Lp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~~~  202 (253)
T d1up7a2         151 HIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQ-GKGDHFALSFIHAVKM  202 (253)
T ss_dssp             EEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCC-CCCCHHHHHHHHHHHH
T ss_pred             EEEeCCCcCcCCCCChhhheEEEEEecCCccccccc-CCCcHHHHHHHHHHHH
Confidence            9999999997 689999999999998 999999865 6999888877765443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.11  E-value=7.8e-06  Score=68.32  Aligned_cols=165  Identities=16%  Similarity=0.118  Sum_probs=90.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .+++|.|+||+|++|++++..|+..|.     .+.++.+.+++  +...    ++..........+....+..++++++|
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~-----~v~v~~~~R~~--~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~d   70 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSD-----KFVAKGLVRSA--QGKE----KIGGEADVFIGDITDADSINPAFQGID   70 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTT-----TCEEEEEESCH--HHHH----HTTCCTTEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-----cEEEEEEcCCH--HHHH----hccCCcEEEEeeeccccccccccccce
Confidence            456999999999999999999998762     12455455542  2221    111100000001111123567899999


Q ss_pred             EEEEeCCCCCCC---------------CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCC
Q 020022           84 IAVMVGGFPRKE---------------GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        84 iVi~~ag~~~~~---------------~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      .||++++.....               ..........|+...+.++......+.+  .....+.....        .+..
T Consensus        71 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~--------~~~~  140 (252)
T d2q46a1          71 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK--HIVVVGSMGGT--------NPDH  140 (252)
T ss_dssp             EEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCS--EEEEEEETTTT--------CTTC
T ss_pred             eeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccccc--ccccccccccC--------CCCc
Confidence            999998753210               0112234456777777888877776633  23333321110        0111


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      +..............+...+.+..+++..-++...++|..+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~  181 (252)
T d2q46a1         141 PLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEG  181 (252)
T ss_dssp             GGGGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCT
T ss_pred             ccccccccchhhhhhhhhhhhhcccccceeecceEEECCCc
Confidence            11112223344455666777778888877777666677643

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=98.10  E-value=6.8e-06  Score=67.89  Aligned_cols=138  Identities=11%  Similarity=0.136  Sum_probs=76.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH--------HHHhhhhcCCccceEeeCChhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK--------MELVDAAFPLLKGVVATTDAVE   77 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~--------~dl~~~~~~~~~~~~~~~~~~~   77 (332)
                      |||+||| .|+||..+|..++ .|.       ++..||+++  ++.+...        ..+++.......+++.+++...
T Consensus         1 MkI~ViG-lG~vGl~~a~~~a-~g~-------~V~g~Din~--~~v~~l~~g~~p~~e~~l~~~~~~~~~~~~~~~~~~~   69 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLLS-LQN-------EVTIVDILP--SKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKA   69 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHT-TTS-------EEEEECSCH--HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHH
T ss_pred             CEEEEEC-CChhHHHHHHHHH-CCC-------cEEEEECCH--HHHHHHhhcccccchhhHHHHhhhhhhhhhccchhhh
Confidence            6999999 7999999987664 442       899999985  3332111        0111111112245666777888


Q ss_pred             hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-CcccchHHHHHHhCC---CCCCCcE
Q 020022           78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANTNALILKEFAP---SIPAKNI  153 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~~~~~~~~~~~---~~~~~~i  153 (332)
                      +..++|+|+++...+.....+.     .....+....+.+.... +...+++-| -|......+......   .+.|+++
T Consensus        70 ~~~~~~ii~v~vpt~~~~~~~~-----~~~~~v~~~~~~~~~~~-~~~~iii~Stv~pgt~~~~~~~~~~~~~~~~PE~i  143 (196)
T d1dlja2          70 AYKEAELVIIATPTNYNSRINY-----FDTQHVETVIKEVLSVN-SHATLIIKSTIPIGFITEMRQKFQTDRIIFSPEFL  143 (196)
T ss_dssp             HHHHCSEEEECCCCCEETTTTE-----ECCHHHHHHHHHHHHHC-SSCEEEECSCCCTTHHHHHHHHTTCSCEEECCCCC
T ss_pred             hhhccccccccCCccccccCCC-----cceeEEeehhhhhhhcc-cceeEEeeeecCceeeeeeeeccchhhhccchhhc
Confidence            8999999999877664322111     12234445555555554 445444433 355544444443321   1234555


Q ss_pred             EEechHH
Q 020022          154 TCLTRLD  160 (332)
Q Consensus       154 ~~~t~ld  160 (332)
                      --|+.++
T Consensus       144 ~~G~ai~  150 (196)
T d1dlja2         144 RESKALY  150 (196)
T ss_dssp             CTTSTTH
T ss_pred             chhhhHh
Confidence            4444443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.7e-06  Score=77.48  Aligned_cols=172  Identities=12%  Similarity=-0.034  Sum_probs=99.5

Q ss_pred             cEE-EEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHH-hhhhcCCccceEee-CC------hh
Q 020022            6 VRV-LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL-VDAAFPLLKGVVAT-TD------AV   76 (332)
Q Consensus         6 ~kI-~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl-~~~~~~~~~~~~~~-~~------~~   76 (332)
                      +|| .||||+||+|++++..|+..|.       +|+.+|+........ ...++ .+.......++... .|      ..
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-------~V~~i~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   72 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY-------EVHGIVRRSSSFNTG-RIEHLYKNPQAHIEGNMKLHYGDLTDSTCLV   72 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCSSCCCT-TTGGGC---------CEEEEECCTTCHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC-------EEEEEECCCcccchh-hHHHHhhchhhhccCCcEEEEeecCCchhhH
Confidence            589 7999999999999999998774       899999864211111 00111 11111111233221 12      22


Q ss_pred             hhcC--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCC-eEEEEecCcccchH---H-HHHHhCCC
Q 020022           77 EACT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPN-CKVLVVANPANTNA---L-ILKEFAPS  147 (332)
Q Consensus        77 ~al~--~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~-~~viv~tNP~~~~~---~-~~~~~~~~  147 (332)
                      .++.  +.++|++.++.....  .....+....|+....++.+.+++++..+ .++|.+|. +.+--   . -+.+- .-
T Consensus        73 ~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS-~~vyg~~~~~~~~E~-~~  150 (347)
T d1t2aa_          73 KIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST-SELYGKVQEIPQKET-TP  150 (347)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE-GGGTCSCSSSSBCTT-SC
T ss_pred             HHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecc-hheecCCCCCCCCCC-CC
Confidence            2332  456888877654211  12345566889999999999998876432 45655552 11100   0 00010 11


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      +.|...++.+.+...++...+++..+++...++...|.|.
T Consensus       151 ~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp  190 (347)
T d1t2aa_         151 FYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESP  190 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCC
Confidence            2234468888888888888888888988777877767785

>d1s6ya2 d.162.1.2 (A:173-445) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.06  E-value=4.2e-05  Score=66.41  Aligned_cols=74  Identities=11%  Similarity=0.094  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 020022          249 SSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA  325 (332)
Q Consensus       249 ~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~  325 (332)
                      ..++.+|. ++.+| .+.++.++|..+|. -++|.|+++.+||++ ++|+.++.. .+|.+....+++.....-+-.++
T Consensus       146 e~a~~ii~-ai~~~-~~~~~~vNv~N~G~I~nLp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~~~~e~L~ve  221 (270)
T d1s6ya2         146 DAACSLIS-SIYND-KRDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAV-GDLPVAVRGLVQQIKSFERVAAE  221 (270)
T ss_dssp             HHHHHHHH-HHHHT-CCCEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHhcC-CCeEEEEECCCCCcCCCCCccceEEEEEEEECCceEeeec-CCCcHHHHHHHHHHHHHHHHHHH
Confidence            45677665 47777 78888999999997 689999999999998 999999865 69999988887765443333333

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=98.04  E-value=2.6e-05  Score=62.61  Aligned_cols=96  Identities=19%  Similarity=0.202  Sum_probs=58.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+||| .|.+|++++..|...+...     +|..+|+++  +.++ .+.+..-      .....+........++|+|
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~-----~I~~~D~~~--~~~~-~a~~~~~------~~~~~~~~~~~~~~~~dlI   66 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKG-----KIYGYDINP--ESIS-KAVDLGI------IDEGTTSIAKVEDFSPDFV   66 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCS-----EEEEECSCH--HHHH-HHHHTTS------CSEEESCGGGGGGTCCSEE
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCe-----EEEEEECCh--HHHH-HHHHhhc------chhhhhhhhhhhccccccc
Confidence            4799999 7999999999999876422     799999874  2222 1121110      0111222234455789999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |++.-                ...+.++.+.+..+.+++.+++-+++
T Consensus        67 ila~p----------------~~~~~~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          67 MLSSP----------------VRTFREIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             EECSC----------------HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             cccCC----------------chhhhhhhhhhhcccccccccccccc
Confidence            99841                12344555666666666766655553

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=98.02  E-value=1.9e-06  Score=77.41  Aligned_cols=107  Identities=17%  Similarity=0.102  Sum_probs=66.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee----CChhhhcC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT----TDAVEACT   80 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~----~~~~~al~   80 (332)
                      .+||.||||+|++|++++..|+..|.       +|+.+|++..  ...... +..... ....-+...    ....++++
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~-------~V~~~~r~~~--~~~~~~-~~~~~~-~~i~~~~~Dl~d~~~l~~~~~   76 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGA-------TVKGYSLTAP--TVPSLF-ETARVA-DGMQSEIGDIRDQNKLLESIR   76 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCS--SSSCHH-HHTTTT-TTSEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCCC--ccHHHH-hhhhcc-cCCeEEEeeccChHhhhhhhh
Confidence            58999999999999999999998873       7999998752  111111 110000 000011110    11234444


Q ss_pred             --CCcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcC
Q 020022           81 --GVNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAA  122 (332)
Q Consensus        81 --~aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~  122 (332)
                        ..|+|+++|+.+....  .........|+....++.+.+.+...
T Consensus        77 ~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~  122 (356)
T d1rkxa_          77 EFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGG  122 (356)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCC
T ss_pred             hchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccc
Confidence              4489999887653211  23345677899999999999998864

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.00  E-value=1.7e-05  Score=70.94  Aligned_cols=172  Identities=12%  Similarity=0.032  Sum_probs=94.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee----CChhhhcC-
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT----TDAVEACT-   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~----~~~~~al~-   80 (332)
                      +.|.||||+||+|++++..|+..+.       +|+.+|.... .... ..............-+...    .+..++++ 
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-------~V~~~d~~~~-~~~~-~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~   72 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-------DCVVADNLSN-STYD-SVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCSS-CCTH-HHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-------eEEEEECCCC-cchh-HHHhHHhhcccCCeEEEeecCCHHHHHHHHhc
Confidence            4589999999999999999998763       7889985421 1111 1111111111111111111    11233333 


Q ss_pred             -CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-h-HHHHHH--h--CCCCCCC
Q 020022           81 -GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-N-ALILKE--F--APSIPAK  151 (332)
Q Consensus        81 -~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~-~~~~~~--~--~~~~~~~  151 (332)
                       +.|+|||+|+.....  ..........|+.....+.+..++...+  ++|+.|...-. . ......  .  ..-..+.
T Consensus        73 ~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~--~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~  150 (347)
T d1z45a2          73 YKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVS--KFVFSSSATVYGDATRFPNMIPIPEECPLGPT  150 (347)
T ss_dssp             SCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC
T ss_pred             cCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccc--eEEeecceeeecCcccCCCCCccccccCCCCC
Confidence             789999999865311  2344566788999999999999987633  45555543211 0 000000  0  0001122


Q ss_pred             cEEEechHHHHHHHHHHHHH--cCCCCCCeeeeEEEecc
Q 020022          152 NITCLTRLDHNRALGQISEK--LNVQVSDVKNVIIWGNH  188 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~--l~v~~~~v~~~~v~G~h  188 (332)
                      ..++.+.....++...+.+.  .+.+...++...|+|.+
T Consensus       151 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~  189 (347)
T d1z45a2         151 NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAH  189 (347)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCC
T ss_pred             ChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeec
Confidence            35677777777766655543  34444556666667754

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.93  E-value=3.6e-05  Score=61.46  Aligned_cols=65  Identities=20%  Similarity=0.350  Sum_probs=48.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |+||++|| .|.||+.+|..|+..|.       ++..||+++  ++.    .++....      .....+..++++.+|+
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~-------~v~~~d~~~--~~~----~~~~~~~------~~~~~~~~e~~~~~di   60 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGY-------LLNVFDLVQ--SAV----DGLVAAG------ASAARSARDAVQGADV   60 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTC-------EEEEECSSH--HHH----HHHHHTT------CEECSSHHHHHTSCSE
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCC-------eEEEEECch--hhh----hhhhhhh------ccccchhhhhccccCe
Confidence            35899999 89999999999998764       899999874  222    2232221      1233567899999999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      |+...
T Consensus        61 ii~~v   65 (162)
T d3cuma2          61 VISML   65 (162)
T ss_dssp             EEECC
T ss_pred             eeecc
Confidence            98874

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=0.00023  Score=61.08  Aligned_cols=158  Identities=15%  Similarity=0.225  Sum_probs=94.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEee-CC--------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVAT-TD--------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~-~~--------   74 (332)
                      .+.+.|+||++.+|.+++..|++.|.       .|++.|+++  ++++..+.++....... ...+... ++        
T Consensus        10 ~Kv~lITGas~GIG~aiA~~la~~G~-------~Vv~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v   80 (257)
T d1xg5a_          10 DRLALVTGASGGIGAAVARALVQQGL-------KVVGCARTV--GNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF   80 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHH
Confidence            46788999999999999999999874       799999874  56665555555432110 0001110 11        


Q ss_pred             --hhhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhh----HHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           75 --AVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKN----VSIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n----~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                        ..+.+..-|++|+.||.....   ..+.   +..+..|    .-..+.+++.+++...+++.||+++.....      
T Consensus        81 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~------  154 (257)
T d1xg5a_          81 SAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH------  154 (257)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGT------
T ss_pred             HHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhc------
Confidence              223356789999999875422   1232   2334444    455677777777765445778887754431      


Q ss_pred             HhCCCCCCC-c-EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAK-N-ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~-~-i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.|.. . .++.+.---..|-+.+|..+...+.+|+
T Consensus       155 ---~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~  191 (257)
T d1xg5a_         155 ---RVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIR  191 (257)
T ss_dssp             ---SCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred             ---CCCCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEE
Confidence               112211 1 2344444445677778877754556776

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=4.1e-06  Score=72.98  Aligned_cols=163  Identities=18%  Similarity=0.199  Sum_probs=98.3

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC------ChhhhcCC
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT------DAVEACTG   81 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~------~~~~al~~   81 (332)
                      |.||||+||+|++++..|+..|..      +|..+|.-....+.    ..+.+...   .......      .....+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~------~V~~~d~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGIT------DILVVDNLKDGTKF----VNLVDLNI---ADYMDKEDFLIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCC------CEEEEECCSSGGGG----HHHHTSCC---SEEEEHHHHHHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCC------eEEEEECCCCcchh----hcccccch---hhhccchHHHHHHhhhhcccc
Confidence            899999999999999999987641      57888843211111    11111110   0000000      11234578


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC--CC-CCCCcEEEech
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA--PS-IPAKNITCLTR  158 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~--~~-~~~~~i~~~t~  158 (332)
                      +++|++.|+.......+.......|......+.....+.+.   .+++.|........- ....  .. .++...++.+.
T Consensus        69 ~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i---~~v~~ss~~~~~~~~-~~~~~~~~~~~~~~~Y~~~K  144 (307)
T d1eq2a_          69 VEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI---PFLYASSAATYGGRT-SDFIESREYEKPLNVYGYSK  144 (307)
T ss_dssp             CCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC---CEEEEEEGGGGTTCC-SCBCSSGGGCCCSSHHHHHH
T ss_pred             hhhhhhhcccccccccccccccccccccccccccccccccc---ccccccccccccccc-cccccccccccccccccccc
Confidence            89999998877666666677777888888888888887763   244444322110000 0000  00 12223467777


Q ss_pred             HHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          159 LDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       159 lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      +....+...+++..+.+...++...|+|.
T Consensus       145 ~~~e~~~~~~~~~~~~~~~~~r~~~vyGp  173 (307)
T d1eq2a_         145 FLFDEYVRQILPEANSQIVGFRYFNVYGP  173 (307)
T ss_dssp             HHHHHHHHHHGGGCSSCEEEEEECEEESS
T ss_pred             chhhhhccccccccccccccccceeEeec
Confidence            77777778888888888888888877885

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.91  E-value=1.2e-05  Score=69.32  Aligned_cols=159  Identities=19%  Similarity=0.178  Sum_probs=93.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC------
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD------   74 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~------   74 (332)
                      |+-+.+++.|+||++.+|.+++..|+..|.       +|.+.|+++  +.++....++.........+++-..+      
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga-------~V~~~~r~~--~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~   71 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGA-------RVAIADINL--EAARATAAEIGPAACAIALDVTDQASIDRCVA   71 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTE-------EEEEEESCH--HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhCCceEEEEeeCCCHHHHHHHHH
Confidence            654567889999999999999999999875       799999984  55554444442211111011100001      


Q ss_pred             -hhhhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           75 -AVEACTGVNIAVMVGGFPRKE---GME---RKDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        75 -~~~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                       ..+.+...|++|..||.....   ..+   .+..+..|+    ...+.+++.+.+.. ..+.||++|.....       
T Consensus        72 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~-~~g~Iv~isS~~~~-------  143 (256)
T d1k2wa_          72 ELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGG-RGGKIINMASQAGR-------  143 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCGGGT-------
T ss_pred             HHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhc-cCCccccccchhhc-------
Confidence             122345789999999976422   123   334455665    44556666666654 34678887754331       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       144 --~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIr  176 (256)
T d1k2wa_         144 --RGEALVGVYCATKAAVISLTQSAGLNLI--RHGIN  176 (256)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             --cccccccchhhhhhHHHHHHHHHHHHhc--ccCeE
Confidence              1222111344444444567777888776  45665

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.90  E-value=5.1e-05  Score=59.73  Aligned_cols=39  Identities=13%  Similarity=0.304  Sum_probs=33.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |+..++||+|||+.|.||+.++..|...|.       ++..+|++.
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~-------~V~~~d~~~   43 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGY-------PISILDRED   43 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTC-------CEEEECTTC
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCC-------CcEeccccc
Confidence            555678999999779999999999998874       799999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=3.2e-05  Score=66.06  Aligned_cols=158  Identities=15%  Similarity=0.152  Sum_probs=92.8

Q ss_pred             CCC--CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe---eCCh
Q 020022            1 MAK--EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA---TTDA   75 (332)
Q Consensus         1 m~~--~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~---~~~~   75 (332)
                      |.+  +.+++.|+||++.+|.+++..|+..|.       +|.+.|+++  +.++....++..... ....+..   ....
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~l~~~~~~~~~~~~-~~~Dv~d~~~v~~~   70 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGA-------RVVAVSRTQ--ADLDSLVRECPGIEP-VCVDLGDWEATERA   70 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHSTTCEE-EECCTTCHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEECCH--HHHHHHHHhcCCCeE-EEEeCCCHHHHHHH
Confidence            654  457999999999999999999999874       799999984  455444333332110 0001000   0112


Q ss_pred             hhhcCCCcEEEEeCCCCCCCC---CCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           76 VEACTGVNIAVMVGGFPRKEG---MERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~~---~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                      .+.+...|++|..||......   .+.+   ..+..|+.    ..+.+++.+.+.. ..+.+++++.-...         
T Consensus        71 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~-~~g~Ii~isS~~~~---------  140 (244)
T d1pr9a_          71 LGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG-VPGAIVNVSSQCSQ---------  140 (244)
T ss_dssp             HTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCGGGT---------
T ss_pred             HHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhC-CcceEeeccccccc---------
Confidence            234567899999999864321   2333   34455553    5566666555443 34677777653321         


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .+.|..-.++.++---..+-+.+|..++  +..|+
T Consensus       141 ~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIr  173 (244)
T d1pr9a_         141 RAVTNHSVYCSTKGALDMLTKVMALELG--PHKIR  173 (244)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ccccchhhhhhhHHHHHHHHHHHHHHhC--CCcEE
Confidence            1222222345555555677788888775  45676

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.82  E-value=1.1e-05  Score=63.88  Aligned_cols=65  Identities=11%  Similarity=0.161  Sum_probs=46.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| +|.+|++++..|+..+.       ++.++|++.  ++++.....+         .+....+..+++++||+|
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~-------~i~v~~r~~--~~~~~l~~~~---------g~~~~~~~~~~~~~~dvI   61 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPH-------ELIISGSSL--ERSKEIAEQL---------ALPYAMSHQDLIDQVDLV   61 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSC-------EEEEECSSH--HHHHHHHHHH---------TCCBCSSHHHHHHTCSEE
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCC-------eEEEEcChH--HhHHhhcccc---------ceeeechhhhhhhcccee
Confidence            6999999 79999999999876542       799999873  4443222211         112345678889999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        62 ilav   65 (152)
T d2ahra2          62 ILGI   65 (152)
T ss_dssp             EECS
T ss_pred             eeec
Confidence            9885

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.82  E-value=3.7e-05  Score=63.13  Aligned_cols=80  Identities=10%  Similarity=0.113  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe--eCChhhhcCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA--TTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~--~~~~~~al~~   81 (332)
                      +.++|.|+||+|.+|..++..|++.|.       +++++|++.  ++++.....+.............  ..+..+++.+
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   92 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGA-------EVVLCGRKL--DKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG   92 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhcc-------chhhcccch--HHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcC
Confidence            457999999999999999999999874       799999984  55544444443221111111122  2345678899


Q ss_pred             CcEEEEeCCCC
Q 020022           82 VNIAVMVGGFP   92 (332)
Q Consensus        82 aDiVi~~ag~~   92 (332)
                      +|+||+++|.+
T Consensus        93 iDilin~Ag~g  103 (191)
T d1luaa1          93 AHFVFTAGAIG  103 (191)
T ss_dssp             CSEEEECCCTT
T ss_pred             cCeeeecCccc
Confidence            99999999865

>d1u8xx2 d.162.1.2 (X:170-445) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=97.82  E-value=0.00012  Score=63.54  Aligned_cols=66  Identities=18%  Similarity=0.212  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022          250 SACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE  318 (332)
Q Consensus       250 ~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~  318 (332)
                      .++++|. +|.+| ++..+.++|..+|. -++|.|+++.+||++ ++|+.++-. .+|.+....+++.-..
T Consensus       154 ~av~ii~-ai~~~-~~~~~~vNv~N~G~I~~Lp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~k~  221 (276)
T d1u8xx2         154 YIVDLAR-AIAYN-TGERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITV-GTIPQFQKGLMEQQVS  221 (276)
T ss_dssp             HHHHHHH-HHHHT-CCEEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHHH
T ss_pred             HHHHHHH-HHhcC-CCcEEEEEeCCCCcCCCCChhhheeeEEEEcCCceEeeec-CCCcHHHHHHHHHHHH
Confidence            4677665 47777 78888999999997 789999999999998 999999875 7999888887765443

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.80  E-value=1e-05  Score=71.38  Aligned_cols=166  Identities=12%  Similarity=-0.005  Sum_probs=97.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CCh------hhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDA------VEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~------~~a   78 (332)
                      +||.|+||+|++|++++..|+..|.       +|+.+|+.......    ..+++..  ...++... .|.      .+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-------~V~~~~r~~~~~~~----~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~   67 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-------RVHGLVARRSSDTR----WRLRELG--IEGDIQYEDGDMADACSVQRA   67 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECCCSSCCC----HHHHHTT--CGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCCCcccH----HHHHHhc--ccCCcEEEEccccChHHhhhh
Confidence            5899999999999999999998764       78888876421111    1111111  01122111 121      111


Q ss_pred             cC--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCC
Q 020022           79 CT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPA  150 (332)
Q Consensus        79 l~--~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~  150 (332)
                      +.  ..++++++++.....  ..+..+.+..|+...+++.+.+.++..+ .+++..|. ..+.-.    ...+. +-+.+
T Consensus        68 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~-~~~i~~Ss-~~~~~~~~~~~~~E~-~~~~p  144 (321)
T d1rpna_          68 VIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE-TRFYQAST-SEMFGLIQAERQDEN-TPFYP  144 (321)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTT-SEEEEEEE-GGGGCSCSSSSBCTT-SCCCC
T ss_pred             hccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCC-cccccccc-hhhcCcccCCCCCCC-CCccc
Confidence            22  456777776554321  2345677888999999999999998744 45554442 111000    00000 00112


Q ss_pred             CcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022          151 KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN  187 (332)
Q Consensus       151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~  187 (332)
                      ...++.+.+...++...+++..+++...++...+.|.
T Consensus       145 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp  181 (321)
T d1rpna_         145 RSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESP  181 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECT
T ss_pred             cChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCC
Confidence            2346778888888888888888988777776666774

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.79  E-value=1.4e-05  Score=68.88  Aligned_cols=89  Identities=15%  Similarity=0.160  Sum_probs=58.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--CCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~aD   83 (332)
                      |||.|+||+|++|++++..|...|.       +|+.+|+++         .|+.+..           ...++++  +.|
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~-------~Vi~~~r~~---------~D~~d~~-----------~~~~~l~~~~~d   54 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNV-------EVIPTDVQD---------LDITNVL-----------AVNKFFNEKKPN   54 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSE-------EEEEECTTT---------CCTTCHH-----------HHHHHHHHHCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-------EEEEeechh---------ccCCCHH-----------HHHHHHHHcCCC
Confidence            6999999999999999999988764       788998763         1222211           1223333  569


Q ss_pred             EEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022           84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHA  121 (332)
Q Consensus        84 iVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~  121 (332)
                      +||++|+.....  ..........|......+........
T Consensus        55 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~   94 (281)
T d1vl0a_          55 VVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG   94 (281)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT
T ss_pred             EEEeeccccccccccccchhhccccccccccccccccccc
Confidence            999998765311  12234455667777767766666654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.74  E-value=1.6e-05  Score=67.64  Aligned_cols=158  Identities=14%  Similarity=0.082  Sum_probs=86.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc--CCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC--TGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al--~~a   82 (332)
                      .++|.|+||+|.+|.+++..|++.|.       +|.++|++++++.......++..........  ......+.+  ...
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i   72 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNW-------WVASIDVVENEEASASVIVKMTDSFTEQADQ--VTAEVGKLLGDQKV   72 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESSCCTTSSEEEECCCCSCHHHHHHH--HHHHHHHHHTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEeCCccccccccceeecccCcHHHHHH--HHHHHHHHhCCCCc
Confidence            47899999999999999999999874       7899998764322211111100000000000  000111222  247


Q ss_pred             cEEEEeCCCCC--CC-CCC----HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022           83 NIAVMVGGFPR--KE-GME----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC  155 (332)
Q Consensus        83 DiVi~~ag~~~--~~-~~~----r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~  155 (332)
                      |++|+.||...  .+ ...    .+..+..|+...-.+.+.+..+-.+.+.|++++.-...         .+.|..-.++
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~---------~~~~~~~~Y~  143 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL---------DGTPGMIGYG  143 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG---------SCCTTBHHHH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHc---------CCccCCcccH
Confidence            99999998532  11 111    22345666665555555555544455777777643221         1223222345


Q ss_pred             echHHHHHHHHHHHHHcCCCCCCee
Q 020022          156 LTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       156 ~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .++---..|-+.+|..++-.+..|+
T Consensus       144 asKaal~~lt~~la~El~~~~~gI~  168 (236)
T d1dhra_         144 MAKGAVHQLCQSLAGKNSGMPSGAA  168 (236)
T ss_dssp             HHHHHHHHHHHHHTSTTSSCCTTCE
T ss_pred             HHHHHHHHHHHHHHHHhccCCCcEE
Confidence            5555556777777777765456776

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.71  E-value=6.4e-05  Score=64.19  Aligned_cols=154  Identities=18%  Similarity=0.147  Sum_probs=90.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-------Chhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-------DAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-------~~~~   77 (332)
                      .+.+.|+||++.+|.+++..|+..|.       +|.+.|+++  ++++....++.+.......+++-..       ...+
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           6 GKVALVSGGARGMGASHVRAMVAEGA-------KVVFGDILD--EEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVT   76 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHH
Confidence            46788999999999999999999874       799999984  5565555555432211111110000       1123


Q ss_pred             hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           78 ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      .+...|++|..||.....   ..+.   +..+..|+    ..++...+.+.+..  .+.||+++.....         .+
T Consensus        77 ~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--~G~Ii~isS~~~~---------~~  145 (244)
T d1nffa_          77 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG--RGSIINISSIEGL---------AG  145 (244)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT---------SC
T ss_pred             HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC--cceEEeccccccc---------cc
Confidence            345789999999975422   2233   33445554    44556666666653  4678888764431         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .|..-.++.++---..|-+.+|..+.  +..|+
T Consensus       146 ~~~~~~Y~asKaal~~ltk~lA~el~--~~gIr  176 (244)
T d1nffa_         146 TVACHGYTATKFAVRGLTKSTALELG--PSGIR  176 (244)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             cccccchhhHHHHHHHHHHHHHHHhc--ccCEE
Confidence            22111344444445667777777765  45665

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.69  E-value=0.00011  Score=63.89  Aligned_cols=152  Identities=18%  Similarity=0.150  Sum_probs=88.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-------C
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-------T   73 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-------~   73 (332)
                      |+-+.+++.|+||++.+|.+++..|+..|.       +|++.|+++  ++++....++.........+++..       .
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga-------~V~i~~r~~--~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~   71 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGA-------KVAVLDKSA--ERLAELETDHGDNVLGIVGDVRSLEDQKQAAS   71 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHcCCCeeEEecccccHHHHHHHHH
Confidence            665668999999999999999999999874       799999984  555544444432111110111000       0


Q ss_pred             ChhhhcCCCcEEEEeCCCCCCC-------CCC----HHHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           74 DAVEACTGVNIAVMVGGFPRKE-------GME----RKDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        74 ~~~~al~~aDiVi~~ag~~~~~-------~~~----r~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                      ...+.+...|++|..||.....       .+.    .+..+..|+    ..++.+.+.+++..  .. +|+++.-...  
T Consensus        72 ~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~-iI~i~S~~~~--  146 (276)
T d1bdba_          72 RCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GN-VIFTISNAGF--  146 (276)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CE-EEEECCGGGT--
T ss_pred             HHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CC-ceeeeechhc--
Confidence            1223456789999999974321       111    233444554    55666777776642  34 4444432221  


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN  173 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~  173 (332)
                             .+.|..-.++.++---..|-+.+|..++
T Consensus       147 -------~~~~~~~~Y~asKaal~~ltr~lA~ela  174 (276)
T d1bdba_         147 -------YPNGGGPLYTAAKHAIVGLVRELAFELA  174 (276)
T ss_dssp             -------STTSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -------cCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence                   1112112345555555677788888886

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.68  E-value=2.4e-05  Score=61.79  Aligned_cols=65  Identities=14%  Similarity=0.181  Sum_probs=44.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||++|| +|.+|++++..|+..+-      .++.++|+++  ++++....++         .+...++. ++++++|+|
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~------~~i~v~~r~~--~~~~~l~~~~---------~~~~~~~~-~~v~~~Div   61 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGG------YRIYIANRGA--EKRERLEKEL---------GVETSATL-PELHSDDVL   61 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCS------CEEEEECSSH--HHHHHHHHHT---------CCEEESSC-CCCCTTSEE
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCC------CcEEEEeCCh--hHHHHhhhhc---------cccccccc-ccccccceE
Confidence            6999999 69999999998887652      1799999984  4333222111         12334443 558899999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        62 ~lav   65 (152)
T d1yqga2          62 ILAV   65 (152)
T ss_dssp             EECS
T ss_pred             EEec
Confidence            9884

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=0.0001  Score=57.78  Aligned_cols=99  Identities=13%  Similarity=0.133  Sum_probs=59.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      +||+|+||+|.||+-+...|+...-+.   ..+++++..+.    ..+.........     .........++++++|++
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p---~~~l~~~~ss~----s~g~~~~~~~~~-----~~~~~~~~~~~~~~~Div   69 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFD---AIRPVFFSTSQ----LGQAAPSFGGTT-----GTLQDAFDLEALKALDII   69 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGG---GSEEEEEESSS----TTSBCCGGGTCC-----CBCEETTCHHHHHTCSEE
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCC---eeEEEEeeccc----cccccccccCCc-----eeeecccchhhhhcCcEE
Confidence            489999999999999998777643222   12788886543    122111111110     111122344678999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      |++++                .+..+++++.+.+.+. ++  ++++|..+
T Consensus        70 F~a~~----------------~~~s~~~~~~~~~~g~-~~--~VID~Ss~  100 (146)
T d1t4ba1          70 VTCQG----------------GDYTNEIYPKLRESGW-QG--YWIDAASS  100 (146)
T ss_dssp             EECSC----------------HHHHHHHHHHHHHTTC-CC--EEEECSST
T ss_pred             EEecC----------------chHHHHhhHHHHhcCC-Ce--ecccCCcc
Confidence            99863                2445677777776652 23  45666554

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.67  E-value=0.00021  Score=60.75  Aligned_cols=158  Identities=13%  Similarity=0.089  Sum_probs=89.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee---CChhh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT---TDAVE   77 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~---~~~~~   77 (332)
                      |.=+-+++.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++..... ...++...   ....+
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga-------~V~~~~r~~--~~l~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGA-------KVVAVTRTN--SDLVSLAKECPGIEP-VCVDLGDWDATEKALG   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHSTTCEE-EECCTTCHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHhcCCCeE-EEEeCCCHHHHHHHHH
Confidence            443557899999999999999999999874       799999874  444433333322110 00000000   01223


Q ss_pred             hcCCCcEEEEeCCCCCCCC---CCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           78 ACTGVNIAVMVGGFPRKEG---MERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~---~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      .+...|++|..||......   .+.+   ..+..|+    ...+...+.+.+.. ..+.+|+++.....         .+
T Consensus        71 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~~~---------~~  140 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG-VPGSIVNVSSMVAH---------VT  140 (242)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCGGGT---------SC
T ss_pred             HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhc-ccCcccccchhhcc---------cc
Confidence            3457899999999754321   2333   3445554    34555566554443 34667777654321         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .|..-.++.++---..+-+.+|..++  +..|+
T Consensus       141 ~~~~~~Y~asKaal~~lt~~lA~e~~--~~gIr  171 (242)
T d1cyda_         141 FPNLITYSSTKGAMTMLTKAMAMELG--PHKIR  171 (242)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCccccccchHHHHHHHHHHHHHHhC--ccCee
Confidence            22111344444445567777887765  45666

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.67  E-value=0.00034  Score=59.78  Aligned_cols=154  Identities=18%  Similarity=0.187  Sum_probs=89.8

Q ss_pred             cEE-EEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEee-------CC
Q 020022            6 VRV-LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVAT-------TD   74 (332)
Q Consensus         6 ~kI-~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~-------~~   74 (332)
                      +|| .|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++.+.....   ..+++-.       ..
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga-------~V~~~~r~~--~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~   71 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGF-------AVAIADYND--ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ   71 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            466 6889999999999999999874       799999984  56665555554422110   0011000       01


Q ss_pred             hhhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           75 AVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      ..+.+...|++|..||.....   ..+.   +..+..|+    ..++...+.+.+.. ....++++|.....        
T Consensus        72 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~~g~Iv~isS~~~~--------  142 (255)
T d1gega_          72 ARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEG-HGGKIINACSQAGH--------  142 (255)
T ss_dssp             HHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCGGGT--------
T ss_pred             HHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhc-cccccccccchhhc--------
Confidence            123356799999999975422   1233   33455555    44455666666665 45667777643321        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.|..-.++.++---..+-+.+|..++  +..|+
T Consensus       143 -~~~~~~~~Y~asKaal~~ltk~lA~el~--~~gIr  175 (255)
T d1gega_         143 -VGNPELAVYSSSKFAVRGLTQTAARDLA--PLGIT  175 (255)
T ss_dssp             -SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -ccCcccccchhCHHHHHhhHHHHHHHhh--hhCcE
Confidence             1122111344444444567777887765  45666

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=5.1e-05  Score=64.74  Aligned_cols=154  Identities=15%  Similarity=0.151  Sum_probs=91.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-------Chhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-------DAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-------~~~~   77 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++.........+++...       ...+
T Consensus         4 gK~alITGas~GIG~a~a~~l~~~G~-------~Vv~~~r~~--~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (243)
T d1q7ba_           4 GKIALVTGASRGIGRAIAETLAARGA-------KVIGTATSE--NGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRA   74 (243)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESSH--HHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhc
Confidence            35788899999999999999999874       799999984  5555444444321111100110000       1123


Q ss_pred             hcCCCcEEEEeCCCCCCCC---CCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           78 ACTGVNIAVMVGGFPRKEG---MERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~---~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      .+...|++|..||......   .+.+   ..+..|+    ..++.+.+.+.+..  .+.||++|....       ..  +
T Consensus        75 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--~G~II~isS~~~-------~~--~  143 (243)
T d1q7ba_          75 EFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR--HGRIITIGSVVG-------TM--G  143 (243)
T ss_dssp             HTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCHHH-------HH--C
T ss_pred             ccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC--CCEeeeecchhh-------cC--C
Confidence            3457899999998764322   2323   3345554    55666777776653  467888875322       11  2


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .|..-.++.++---..|-+.+|..++  +..|+
T Consensus       144 ~~~~~~Y~asKaal~~lt~~lA~ela--~~gIr  174 (243)
T d1q7ba_         144 NGGQANYAAAKAGLIGFSKSLAREVA--SRGIT  174 (243)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence            22222355555555677788888775  45666

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=0.00014  Score=62.05  Aligned_cols=159  Identities=16%  Similarity=0.150  Sum_probs=92.2

Q ss_pred             CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-cceEeeCChhhh
Q 020022            1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEA   78 (332)
Q Consensus         1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~~~~~~~~~~~a   78 (332)
                      |.+ +.+++.|+||++.+|.+++..|+..|.       +|++.|+++  ++++.............. ..........+.
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~-------~Vi~~~r~~--~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~   71 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGA-------KVIATDINE--SKLQELEKYPGIQTRVLDVTKKKQIDQFANE   71 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHGGGGGSTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHhccCCceeeeeccccccccccccc
Confidence            654 446788999999999999999999874       799999984  444322111100000000 000001112344


Q ss_pred             cCCCcEEEEeCCCCCCC---CCCHHH---HHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCC
Q 020022           79 CTGVNIAVMVGGFPRKE---GMERKD---VMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~---~~~r~~---~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      +...|++|+.+|.....   ..+.++   .+..|+    ...+.+.+.+.+..  .+.+++++.....       . .+.
T Consensus        72 ~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~--~g~Ii~isS~~~~-------~-~~~  141 (245)
T d2ag5a1          72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK--SGNIINMSSVASS-------V-KGV  141 (245)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCSBTT-------T-BCC
T ss_pred             cccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC--Cceeeeeechhhc-------c-CCc
Confidence            56899999999986532   123332   333343    55666677776653  4677788754331       0 122


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +..-.++.+.---..+-+.+|..++  +..|+
T Consensus       142 ~~~~~Y~~sKaal~~l~r~lA~e~~--~~gIr  171 (245)
T d2ag5a1         142 VNRCVYSTTKAAVIGLTKSVAADFI--QQGIR  171 (245)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhh--hhCcE
Confidence            2222455555555678888888776  45676

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.60  E-value=3.7e-05  Score=60.65  Aligned_cols=64  Identities=13%  Similarity=0.052  Sum_probs=44.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+||| .|.||+.++..|+..+.       ++..+|+... ....    ...... .      ......+++++||+|
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~-------~v~~~~~~~~-~~~~----~~~~~~-~------~~~~~~e~~~~~diI   60 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGV-------EVVTSLEGRS-PSTI----ERARTV-G------VTETSEEDVYSCPVV   60 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTC-------EEEECCTTCC-HHHH----HHHHHH-T------CEECCHHHHHTSSEE
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCC-------eEEEEcCchh-HHHH----Hhhhcc-c------ccccHHHHHhhcCeE
Confidence            6999999 79999999999999763       7888887642 1111    111111 1      112356889999999


Q ss_pred             EEeC
Q 020022           86 VMVG   89 (332)
Q Consensus        86 i~~a   89 (332)
                      |++.
T Consensus        61 i~~v   64 (152)
T d1i36a2          61 ISAV   64 (152)
T ss_dssp             EECS
T ss_pred             EEEe
Confidence            9884

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.59  E-value=5.6e-05  Score=64.01  Aligned_cols=152  Identities=13%  Similarity=0.100  Sum_probs=84.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhh-----HHHHhhhhcCCccceEeeCChhhh--
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV-----KMELVDAAFPLLKGVVATTDAVEA--   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~-----~~dl~~~~~~~~~~~~~~~~~~~a--   78 (332)
                      .||.|+||+|.+|.+++..|++.|.       +|.+.|+++++......     ..+..+...       ......+.  
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~   68 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGY-------TVLNIDLSANDQADSNILVDGNKNWTEQEQS-------ILEQTASSLQ   68 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE-------EEEEEESSCCTTSSEEEECCTTSCHHHHHHH-------HHHHHHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCchhcccccceeccccCchhHHHH-------HHHHHHHHhc
Confidence            5899999999999999999999875       79999998632111100     000000000       00011122  


Q ss_pred             cCCCcEEEEeCCCCCC--C-CCC----HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCC
Q 020022           79 CTGVNIAVMVGGFPRK--E-GME----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAK  151 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~--~-~~~----r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~  151 (332)
                      ...-|++|..||....  + ..+    .+..+..|+.-...+++....+-.+.+.++++|.....         .+.|..
T Consensus        69 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~---------~~~~~~  139 (235)
T d1ooea_          69 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM---------GPTPSM  139 (235)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG---------SCCTTB
T ss_pred             CCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhc---------CCcccc
Confidence            2346999999996432  1 122    22235666655444444444443345677777643321         122211


Q ss_pred             cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          152 NITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      -.++.++---..|-+.+|..++-.+..|+
T Consensus       140 ~~Y~asKaal~~l~~~la~e~~~~~~~i~  168 (235)
T d1ooea_         140 IGYGMAKAAVHHLTSSLAAKDSGLPDNSA  168 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSSCCTTCE
T ss_pred             cchHHHHHHHHHHHHHHHHHhccCCCceE
Confidence            13455555556777788877765556676

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.57  E-value=0.00027  Score=60.06  Aligned_cols=157  Identities=18%  Similarity=0.146  Sum_probs=88.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-c---ceE-eeCCh
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-K---GVV-ATTDA   75 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~---~~~-~~~~~   75 (332)
                      |+.+.+++.|+||++.+|.+++..|+..|.       +|.+.|+++  +.++....++......+. .   .+. .....
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~-------~V~~~~r~~--~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   71 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGA-------RLVACDIEE--GPLREAAEAVGAHPVVMDVADPASVERGFAEA   71 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHTTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHcCCeEEEEecCCHHHHHHHHHHH
Confidence            766778999999999999999999999874       799999984  444433222211000000 0   000 00012


Q ss_pred             hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           76 VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                      .+.+..-|++|..||.....   ..+.   +..+..|+    ...+.+.+.+.+..  ...+++.+....          
T Consensus        72 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--~~~i~~~ss~~~----------  139 (242)
T d1ulsa_          72 LAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN--PGSIVLTASRVY----------  139 (242)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--CEEEEEECCGGG----------
T ss_pred             HHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc--cceeeeeccccc----------
Confidence            23345789999999986432   1233   33445555    44555666665543  355555543111          


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .+.|..-.++.++---..|-+.+|..++  +.+|+
T Consensus       140 ~~~~~~~~Y~asKaal~~ltk~lA~ela--~~gIr  172 (242)
T d1ulsa_         140 LGNLGQANYAASMAGVVGLTRTLALELG--RWGIR  172 (242)
T ss_dssp             GCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             cCCCCCcchHHHHHHHHHHHHHHHHHHh--hhCcE
Confidence            1222222345555445567777777765  45676

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.57  E-value=0.00022  Score=57.44  Aligned_cols=97  Identities=7%  Similarity=0.041  Sum_probs=60.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCcc--ceEeeCChhhhcCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVATTDAVEACTGVN   83 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~--~~~~~~~~~~al~~aD   83 (332)
                      .+|+||| .|.||+.++..|+..|.       +++.||+++  ++++    ++.........  ......+..+++.++|
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~-------~V~v~dr~~--~~~~----~l~~~~~~~~~~~~a~~~~~~~~~~~~~~   68 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGF-------VVCAFNRTV--SKVD----DFLANEAKGTKVLGAHSLEEMVSKLKKPR   68 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSST--HHHH----HHHHTTTTTSSCEECSSHHHHHHHBCSSC
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHhccccccccchhhhhhhhhhhcccc
Confidence            4699999 89999999999999874       699999985  3333    23221111100  1111234567889999


Q ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      .+++..-               +.+.+.++...+.....++.++|..|
T Consensus        69 ~ii~~~~---------------~~~~v~~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          69 RIILLVK---------------AGQAVDNFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             EEEECSC---------------TTHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred             eEEEecC---------------chHHHHHHHHHHHhccccCcEEEecC
Confidence            9998742               11334445555666666666666555

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.54  E-value=0.00033  Score=59.79  Aligned_cols=157  Identities=8%  Similarity=0.020  Sum_probs=90.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeC-------Ch
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATT-------DA   75 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~-------~~   75 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++.....  ....+++-..       ..
T Consensus         6 gK~alVTGas~GIG~aia~~la~~Ga-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (251)
T d1zk4a1           6 GKVAIITGGTLGIGLAIATKFVEEGA-------KVMITGRHS--DVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT   76 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            46788999999999999999999874       799999974  455544444421110  0000000000       11


Q ss_pred             hhhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022           76 VEACTGVNIAVMVGGFPRKE---GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA  145 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~  145 (332)
                      .+.+...|++|..||.....   ..+.+   ..+..|+    ...+...+.+.+.. .++.||+++.....         
T Consensus        77 ~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~-~gg~Ii~isS~~~~---------  146 (251)
T d1zk4a1          77 EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGF---------  146 (251)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGT---------
T ss_pred             HHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcC-CCCceEeeecccee---------
Confidence            23345789999999975432   23333   3445554    45666677777664 34677777754331         


Q ss_pred             CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .+.|..-.++.++---..|-+.+|......+..|+
T Consensus       147 ~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIr  181 (251)
T d1zk4a1         147 VGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR  181 (251)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred             ccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEE
Confidence            12222123444444445666667766444456776

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.54  E-value=0.00021  Score=60.29  Aligned_cols=150  Identities=15%  Similarity=0.167  Sum_probs=86.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.+++.||||++.+|.+++..|+..|.       +|.+.|+++  +.++.....+..++   ..+  ......+.+...|
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-------~V~~~~r~~--~~l~~~~~~~~~~D---v~~--~~~~~~~~~g~iD   68 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-------EVTICARNE--ELLKRSGHRYVVCD---LRK--DLDLLFEKVKEVD   68 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHTCSEEEECC---TTT--CHHHHHHHSCCCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHhcCCcEEEcc---hHH--HHHHHHHHhCCCc
Confidence            346899999999999999999999874       799999974  33332111000000   000  0012345677899


Q ss_pred             EEEEeCCCCCCC---CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE
Q 020022           84 IAVMVGGFPRKE---GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI  153 (332)
Q Consensus        84 iVi~~ag~~~~~---~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i  153 (332)
                      ++|..||.+...   ..+.+   ..+..|+    ...+.+.+.+++..  .+.+|+++.-...         .+.+..-.
T Consensus        69 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~G~ii~i~S~~~~---------~~~~~~~~  137 (234)
T d1o5ia_          69 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG--WGRIVAITSFSVI---------SPIENLYT  137 (234)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT---------SCCTTBHH
T ss_pred             EEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc--ccccccccccccc---------cccccccc
Confidence            999999986432   12333   3344444    45677777777654  3567777643221         11221112


Q ss_pred             EEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          154 TCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       154 ~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ++.++---..|-+.+|..++  +..|+
T Consensus       138 Y~asKaal~~ltk~lA~ela--~~gIr  162 (234)
T d1o5ia_         138 SNSARMALTGFLKTLSFEVA--PYGIT  162 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             chhHHHHHHHHHHHHHHHhc--ccCeE
Confidence            33344344566677777765  44565

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.54  E-value=0.00015  Score=62.20  Aligned_cols=154  Identities=16%  Similarity=0.079  Sum_probs=90.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-------Chhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-------DAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-------~~~~   77 (332)
                      .+++.|+||++.+|.+++..|+..|.       +|++.|+++  +.++....++.........+++-..       ...+
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (254)
T d1hdca_           5 GKTVIITGGARGLGAEAARQAVAAGA-------RVVLADVLD--EEGAATARELGDAARYQHLDVTIEEDWQRVVAYARE   75 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHH
Confidence            46899999999999999999999874       799999984  4454444444321111100110000       1123


Q ss_pred             hcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           78 ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      .+...|++|..||......   .+   ....+..|+    -..+.+.+.+++..  .+.||++|.-...         .+
T Consensus        76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~--~G~II~isS~~~~---------~~  144 (254)
T d1hdca_          76 EFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG--GGSIVNISSAAGL---------MG  144 (254)
T ss_dssp             HHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT---------SC
T ss_pred             HcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC--CCeecccccchhc---------cc
Confidence            3457899999999864221   22   334455555    45566666666653  4678888754331         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .|..-.++.++---..|-+.+|..++  +..|+
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~a--~~gIr  175 (254)
T d1hdca_         145 LALTSSYGASKWGVRGLSKLAAVELG--TDRIR  175 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHhC--CCceE
Confidence            22222345555555677777887765  45565

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.53  E-value=0.00011  Score=63.06  Aligned_cols=155  Identities=14%  Similarity=0.078  Sum_probs=88.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-------Chhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-------DAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-------~~~~   77 (332)
                      .+++.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++..........++...       ...+
T Consensus         6 gK~alITGas~GIG~aia~~la~~Ga-------~V~~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   76 (253)
T d1hxha_           6 GKVALVTGGASGVGLEVVKLLLGEGA-------KVAFSDINE--AAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEECSCH--HHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHH
Confidence            46788999999999999999999874       799999974  5555444444322111111111000       1223


Q ss_pred             hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           78 ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      .+..-|++|..||.....   ..+.   +..+..|+    ..++...+.+++   ..+.||+++.....         .+
T Consensus        77 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~---~~G~Iv~isS~~~~---------~~  144 (253)
T d1hxha_          77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE---TGGSIINMASVSSW---------LP  144 (253)
T ss_dssp             HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT---TCEEEEEECCGGGT---------SC
T ss_pred             HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh---cCCceecccchhhh---------cC
Confidence            445789999999975422   2233   33445554    456666666653   23678888754331         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .|..-.++.++---..|-+.+|..++-...+|+
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~Ir  177 (253)
T d1hxha_         145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIR  177 (253)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             ccccccccchhHHHHHHHHHHHHHHhhcCCCEE
Confidence            222123444444445666666666543323454

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.53  E-value=0.00097  Score=56.96  Aligned_cols=156  Identities=12%  Similarity=0.072  Sum_probs=91.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc----CCccceEeeCC-----
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PLLKGVVATTD-----   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~----~~~~~~~~~~~-----   74 (332)
                      +.+.+.|+||++.+|.+++..|+..|.       .|.+.|+++ .+.++....++.....    ....+++-..+     
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-------~V~~~~r~~-~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~   74 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-------DIVLNGFGD-AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLV   74 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEECCSC-HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCc-HHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            345788999999999999999999874       799999874 3344433333322110    00011111011     


Q ss_pred             --hhhhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           75 --AVEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                        ..+.+-..|++|..||......   .+.   ...+..|+    ..++...+.+++..  .+.||+++.....      
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--~G~Iv~isS~~~~------  146 (260)
T d1x1ta1          75 DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG--FGRIINIASAHGL------  146 (260)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT------
T ss_pred             HHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC--CceEeecccccce------
Confidence              1233457899999999864321   232   33445554    55677777777764  4678888755431      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.|..-.++.++---..|-+.+|..++  +.+|+
T Consensus       147 ---~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIr  179 (260)
T d1x1ta1         147 ---VASANKSAYVAAKHGVVGFTKVTALETA--GQGIT  179 (260)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHHT--TTTEE
T ss_pred             ---eccCCcchhhhhhhhHHHhHHHHHHHhc--hhCcE
Confidence               1222222345555555677888888876  55676

>d1obba2 d.162.1.2 (A:173-480) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=97.53  E-value=0.001  Score=58.39  Aligned_cols=62  Identities=13%  Similarity=0.135  Sum_probs=48.9

Q ss_pred             HHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHH-HHH
Q 020022          251 ACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRK-KLD  314 (332)
Q Consensus       251 ~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~-~l~  314 (332)
                      ++++|. +|.+| ++.++.++|..+|. -++|.|.++-+||++ ++|+.++.-...|.+.-.. +++
T Consensus       184 a~~ii~-ai~~~-~~~~~~vNv~N~G~I~nLp~davVEVpc~v~~~Gi~P~~v~~~lP~~~~~gl~~  248 (308)
T d1obba2         184 HIPFID-ALLND-NKARFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKIEPPLPDRVVKYYLR  248 (308)
T ss_dssp             HHHHHH-HHHHC-CCEEEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEECCCSSCCCHHHHHHTHH
T ss_pred             HHHHHH-HHHcC-CCeEEEEECCCCCcCCCCCccceEEEEEEEeCCceeeeecCCCCChHHHHHHHH
Confidence            566555 57777 88899999999996 789999999999998 9999997522568876544 444

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.51  E-value=0.00048  Score=53.79  Aligned_cols=99  Identities=13%  Similarity=0.116  Sum_probs=58.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      |||+|+||+|++|+-+...|+...-+.   ..++.++.-..    ..+...++.     ............+.++++|+|
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p---~~~i~~~ss~~----~~gk~~~~~-----~~~~~~~~~~~~~~~~~~Dvv   68 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFD---LIEPVFFSTSQ----IGVPAPNFG-----KDAGMLHDAFDIESLKQLDAV   68 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGG---GSEEEEEESSC----CSSBCCCSS-----SCCCBCEETTCHHHHTTCSEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCC---ceEEEEecccc----ccccccccC-----CcceeeecccchhhhccccEE
Confidence            699999999999999998777532111   12677765432    122221111     011111223345678999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      +++.+                -...+++++.+.+.+. .+  +++.|..|
T Consensus        69 F~alp----------------~~~s~~~~~~l~~~g~-~~--~VIDlSsd   99 (147)
T d1mb4a1          69 ITCQG----------------GSYTEKVYPALRQAGW-KG--YWIDAAST   99 (147)
T ss_dssp             EECSC----------------HHHHHHHHHHHHHTTC-CS--EEEESSST
T ss_pred             EEecC----------------chHHHHHhHHHHHcCC-ce--EEEeCCcc
Confidence            99853                1345678888877763 33  35666555

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.00064  Score=58.08  Aligned_cols=154  Identities=17%  Similarity=0.149  Sum_probs=92.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC--------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD--------   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~--------   74 (332)
                      +.+++.|+||++.+|.+++..|+..|.       .|++.|+++  +.++....++...... ...+... ++        
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-------~V~~~~r~~--~~~~~~~~~l~~~g~~-~~~~~~Dvs~~~~~~~~~   79 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-------SVVVSDINA--DAANHVVDEIQQLGGQ-AFACRCDITSEQELSALA   79 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-------EEEEEESCH--HHHHHHHHHHHHTTCC-EEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHcCCc-EEEEEccCCCHHHHHHHH
Confidence            346888999999999999999999874       799999874  5565555555432110 0001110 11        


Q ss_pred             --hhhhcCCCcEEEEeCCCCCCC--CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           75 --AVEACTGVNIAVMVGGFPRKE--GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~~--~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                        ..+.+...|++|..||.....  +.+.+   ..+..|+    ...+.+.+.+.+..  .+.+|+++.-...       
T Consensus        80 ~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--~g~Ii~isS~~~~-------  150 (255)
T d1fmca_          80 DFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG--GGVILTITSMAAE-------  150 (255)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT-------
T ss_pred             HHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc--ccccccccccchh-------
Confidence              123345789999999976432  23333   3344454    45667777777764  3566676643321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .+.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       151 --~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIr  183 (255)
T d1fmca_         151 --NKNINMTSYASSKAAASHLVRNMAFDLG--EKNIR  183 (255)
T ss_dssp             --CCCTTCHHHHHHHHHHHHHHHHHHHHHH--TTTEE
T ss_pred             --ccccccccchhHHHHHHHHHHHHHHHhC--ccCeE
Confidence              1222222345555555677777888775  45676

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=97.44  E-value=5.7e-05  Score=65.03  Aligned_cols=82  Identities=18%  Similarity=0.103  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc----cceEeeCChhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL----KGVVATTDAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~----~~~~~~~~~~~al   79 (332)
                      .++||.|+||+|++|++++..|+..|.       +|+.++++............+.+......    ..+.......+++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~-------~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   74 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGH-------PTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV   74 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC-------CEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhh
Confidence            357999999999999999999998763       68888886532111111111221111100    0111111245678


Q ss_pred             CCCcEEEEeCCCC
Q 020022           80 TGVNIAVMVGGFP   92 (332)
Q Consensus        80 ~~aDiVi~~ag~~   92 (332)
                      +++|.|++.++..
T Consensus        75 ~~~~~vi~~~~~~   87 (307)
T d1qyca_          75 KNVDVVISTVGSL   87 (307)
T ss_dssp             HTCSEEEECCCGG
T ss_pred             hhceeeeeccccc
Confidence            8999999987643

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.43  E-value=0.00045  Score=60.63  Aligned_cols=157  Identities=13%  Similarity=0.154  Sum_probs=90.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch-------hhhhhhHHHHhhhhcCCccceEeeCC--
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-------EALNGVKMELVDAAFPLLKGVVATTD--   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-------~~l~~~~~dl~~~~~~~~~~~~~~~~--   74 (332)
                      +.+.+.|+||++.+|.+++..|+..|.       .|++.|++.+.       +.++....++..........+....+  
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-------~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~   78 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-------LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGE   78 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHH
Confidence            456788999999999999999999885       79999986431       11111222222111100000000011  


Q ss_pred             -----hhhhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           75 -----AVEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        75 -----~~~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                           ..+.+...|++|..||+.....   .+.   +..+..|+    ..++...+.+++..  .+.||++|....    
T Consensus        79 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--~G~IV~isS~~~----  152 (302)
T d1gz6a_          79 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN--YGRIIMTASASG----  152 (302)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEECCHHH----
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC--CcEEEEeCChhh----
Confidence                 1234557899999999865321   232   33445555    56677777777764  467888875332    


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         ..  +.|..-.++.++---..|-+.+|..+.  +..|+
T Consensus       153 ---~~--~~~~~~~Y~asKaal~~lt~~la~E~~--~~gIr  186 (302)
T d1gz6a_         153 ---IY--GNFGQANYSAAKLGLLGLANTLVIEGR--KNNIH  186 (302)
T ss_dssp             ---HH--CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEE
T ss_pred             ---cC--CCCCcHHHHHHHHHHHHHHHHHHHHHh--ccCCc
Confidence               11  222222355555555677777887765  45665

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=97.43  E-value=0.00032  Score=60.59  Aligned_cols=159  Identities=13%  Similarity=0.052  Sum_probs=80.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc----cceEeeCChhhhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL----KGVVATTDAVEAC   79 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~----~~~~~~~~~~~al   79 (332)
                      +++||.|+||+|++|++++..|+..|.       +|+.+++++...... ....+........    .++.......+++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~-------~V~~~~R~~~~~~~~-~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~   73 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH-------PTYVLFRPEVVSNID-KVQMLLYFKQLGAKLIEASLDDHQRLVDAL   73 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC-------CEEEECCSCCSSCHH-HHHHHHHHHTTTCEEECCCSSCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEECCCcccchh-HHHHHhhhccCCcEEEEeecccchhhhhhc
Confidence            456899999999999999999998763       677777764211111 1111111111100    0111112345788


Q ss_pred             CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechH
Q 020022           80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRL  159 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~l  159 (332)
                      ++++.+++.++.....         .|..-...+...+.+...  ..+++.|.-. ..       ........-...+..
T Consensus        74 ~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~a~~~~~--~~~v~~Ss~g-~~-------~~~~~~~~~~~~~~~  134 (312)
T d1qyda_          74 KQVDVVISALAGGVLS---------HHILEQLKLVEAIKEAGN--IKRFLPSEFG-MD-------PDIMEHALQPGSITF  134 (312)
T ss_dssp             TTCSEEEECCCCSSSS---------TTTTTHHHHHHHHHHSCC--CSEEECSCCS-SC-------TTSCCCCCSSTTHHH
T ss_pred             cCcchhhhhhhhcccc---------cchhhhhHHHHHHHHhcC--CcEEEEeecc-cc-------CCCcccccchhhhhh
Confidence            9999999987643211         122223344445555542  3445554211 00       000110111122233


Q ss_pred             HHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022          160 DHNRALGQISEKLNVQVSDVKNVIIWGNHS  189 (332)
Q Consensus       160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg  189 (332)
                      ...+......+..+++..-++...+.|...
T Consensus       135 ~~~~~~~~~~~~~~~~~~i~r~~~~~g~~~  164 (312)
T d1qyda_         135 IDKRKVRRAIEAASIPYTYVSSNMFAGYFA  164 (312)
T ss_dssp             HHHHHHHHHHHHTTCCBCEEECCEEHHHHT
T ss_pred             HHHHHHHHhhcccccceEEeccceeecCCc
Confidence            444444455677788877777666656543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.43  E-value=0.00011  Score=59.21  Aligned_cols=34  Identities=24%  Similarity=0.238  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .|||+||| .|.||+.++..|+..+.       +|..||+++
T Consensus         1 ~MkIGvIG-lG~MG~~ma~~L~~~G~-------~V~~~dr~~   34 (178)
T d1pgja2           1 SMDVGVVG-LGVMGANLALNIAEKGF-------KVAVFNRTY   34 (178)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSSH
T ss_pred             CCEEEEEe-ehHHHHHHHHHHHHCCC-------eEEEEECCH
Confidence            36899999 89999999999998874       799999984

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.43  E-value=0.00076  Score=57.06  Aligned_cols=155  Identities=19%  Similarity=0.164  Sum_probs=89.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-------Chhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-------DAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-------~~~~   77 (332)
                      .+++.|+||++.+|..+|..|+..|.       +|.+.++++  ++++....++.........+++-..       ...+
T Consensus         5 gK~alItGas~GIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~   75 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFAREGA-------SLVAVDREE--RLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALE   75 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999875       799999984  4454333333211111000110000       1223


Q ss_pred             hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCC
Q 020022           78 ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAK  151 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~  151 (332)
                      .+..-|++|..||.....   ..+   ..+.+..|+.....+.+....+..+...+++.|........-.          
T Consensus        76 ~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~----------  145 (241)
T d2a4ka1          76 EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGL----------  145 (241)
T ss_dssp             HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHH----------
T ss_pred             HhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCc----------
Confidence            346789999998865322   223   2345567777666666666666544445555554322111111          


Q ss_pred             cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          152 NITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..++.+..--..|-+.+|+.++-  .+|+
T Consensus       146 ~~Y~~sK~al~~lt~~lA~el~~--~gIr  172 (241)
T d2a4ka1         146 AHYAAGKLGVVGLARTLALELAR--KGVR  172 (241)
T ss_dssp             HHHHHCSSHHHHHHHHHHHHHTT--TTCE
T ss_pred             cccchhhHHHHHHHHHHHHHHhH--hCCE
Confidence            12344455556888889998874  4554

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.40  E-value=0.00036  Score=59.41  Aligned_cols=156  Identities=15%  Similarity=0.134  Sum_probs=87.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC-------hh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD-------AV   76 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~-------~~   76 (332)
                      +.+.+.|+||++.+|.+++..|+..|.       .|.+.|+++. +.++....++.........+++...+       ..
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-------~V~~~~~~~~-~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~   75 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-------DIAIADLVPA-PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVI   75 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSCC-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCch-HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            446788999999999999999999874       7999999753 22221111111000000001100001       12


Q ss_pred             hhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           77 EACTGVNIAVMVGGFPRKE---GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                      +.+...|++|..||.....   ..+.+   ..+..|+    ...+.+.+.+++..  .+.||++|.-...         .
T Consensus        76 ~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--~G~Iv~isS~~~~---------~  144 (247)
T d2ew8a1          76 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG--WGRIINLTSTTYW---------L  144 (247)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGG---------S
T ss_pred             HHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC--CCCccccccchhc---------c
Confidence            3345789999999986432   12333   3444454    55667777777764  3677787754321         1


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       145 ~~~~~~~Y~asKaal~~ltk~lA~ela--~~gIr  176 (247)
T d2ew8a1         145 KIEAYTHYISTKAANIGFTRALASDLG--KDGIT  176 (247)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             cCcccccchhhhccHHHHHHHHHHHhc--ccCeE
Confidence            222112344444444567777777764  45666

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.39  E-value=0.00044  Score=59.35  Aligned_cols=156  Identities=11%  Similarity=0.098  Sum_probs=90.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCC-------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTD-------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~-------   74 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|++.|++. ++.++....++......   ...+++...+       
T Consensus         7 gK~alITGas~GIG~aia~~la~~G~-------~Vv~~~r~~-~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~   78 (261)
T d1geea_           7 GKVVVITGSSTGLGKSMAIRFATEKA-------KVVVNYRSK-EDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQS   78 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCc-HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            46788999999999999999999874       799999874 33444444444332110   0001100001       


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCC---CCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           75 AVEACTGVNIAVMVGGFPRKEG---MERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~---~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      ..+.+..-|++|..||......   .+.+   ..+..|+    ...+..++.+.+... ...|+++|.....        
T Consensus        79 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-g~~Iv~isS~~~~--------  149 (261)
T d1geea_          79 AIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI-KGTVINMSSVHEK--------  149 (261)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-CCEEEEECCGGGT--------
T ss_pred             HHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccc-cccccccccchhc--------
Confidence            1223457899999999864221   2333   3345554    556777777776653 3456666644331        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       150 -~~~~~~~~Y~asKaal~~lt~~lA~e~~--~~gIr  182 (261)
T d1geea_         150 -IPWPLFVHYAASKGGMKLMTETLALEYA--PKGIR  182 (261)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             -ccCccccccccCCccchhhHHHHHHHhh--hhCcE
Confidence             1222222345555555677777887775  45565

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.38  E-value=0.001  Score=56.54  Aligned_cols=153  Identities=16%  Similarity=0.209  Sum_probs=91.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---------   74 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++...... ...+... ++         
T Consensus        10 nKvalITGas~GIG~a~a~~la~~Ga-------~V~~~~r~~--~~l~~~~~~l~~~g~~-~~~~~~Dvt~~~~v~~~~~   79 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAKSVS-------HVICISRTQ--KSCDSVVDEIKSFGYE-SSGYAGDVSKKEEISEVIN   79 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSS-------EEEEEESSH--HHHHHHHHHHHTTTCC-EEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEECCH--HHHHHHHHHHHhcCCc-EEEEEccCCCHHHHHHHHH
Confidence            45677889999999999999998874       799999974  5565555555432110 0001110 11         


Q ss_pred             -hhhhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           75 -AVEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        75 -~~~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                       ..+.+...|++|..||......   .+.   +..+..|+    ...+...+.+.+..  .+.||++|.....       
T Consensus        80 ~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--~G~IVnisS~~~~-------  150 (251)
T d2c07a1          80 KILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR--YGRIINISSIVGL-------  150 (251)
T ss_dssp             HHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT--CEEEEEECCTHHH-------
T ss_pred             HHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC--CeEEEEECCHHhc-------
Confidence             1233457899999998754322   232   33444554    45566777777754  4678888753321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .  +.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       151 ~--~~~~~~~Y~asKaal~~ltr~lA~el~--~~gIr  183 (251)
T d2c07a1         151 T--GNVGQANYSSSKAGVIGFTKSLAKELA--SRNIT  183 (251)
T ss_dssp             H--CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             C--CCCCCHHHHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence            1  122222345555555677777888775  45666

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.37  E-value=0.0027  Score=54.47  Aligned_cols=153  Identities=13%  Similarity=0.128  Sum_probs=87.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeC---C------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATT---D------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~---~------   74 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|.+.|+++  ++++....++...... ..++. +..   +      
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga-------~V~l~~r~~--~~l~~~~~~l~~~~~~-~~~~~~~~~Dvs~~~~v~~   74 (272)
T d1xkqa_           5 NKTVIITGSSNGIGRTTAILFAQEGA-------NVTITGRSS--ERLEETRQIILKSGVS-EKQVNSVVADVTTEDGQDQ   74 (272)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHTTTCC-GGGEEEEECCTTSHHHHHH
T ss_pred             CCEEEEeCcCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCC-CCceEEEEccCCCHHHHHH
Confidence            36788999999999999999999874       799999984  5666555555443211 11111 111   1      


Q ss_pred             ----hhhhcCCCcEEEEeCCCCCCCC-------CC---HHHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           75 ----AVEACTGVNIAVMVGGFPRKEG-------ME---RKDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        75 ----~~~al~~aDiVi~~ag~~~~~~-------~~---r~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                          ..+.+...|++|..||......       ++   ....+..|+    ..++.+.+.+++.  +..+|++.|.....
T Consensus        75 ~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~Ss~a~~  152 (272)
T d1xkqa_          75 IINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS--KGEIVNVSSIVAGP  152 (272)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSS
T ss_pred             HHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc--CCccccccchhccc
Confidence                1233457899999999754221       22   223344555    4556666667654  34544444422211


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                               .+.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       153 ---------~~~~~~~~Y~asKaal~~ltk~lA~el~--~~gIr  185 (272)
T d1xkqa_         153 ---------QAQPDFLYYAIAKAALDQYTRSTAIDLA--KFGIR  185 (272)
T ss_dssp             ---------SCCCSSHHHHHHHHHHHHHHHHHHHHHH--TTTCE
T ss_pred             ---------cCCCCcchhhhHHHHHHHHHHHHHHHhc--ccCeE
Confidence                     1222112344455455667777777765  34555

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.36  E-value=0.0008  Score=57.55  Aligned_cols=153  Identities=18%  Similarity=0.199  Sum_probs=91.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---------   74 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++...... ...+... ++         
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga-------~V~~~~r~~--~~l~~~~~~~~~~g~~-~~~~~~Dv~~~~~v~~~~~   74 (260)
T d1zema1           5 GKVCLVTGAGGNIGLATALRLAEEGT-------AIALLDMNR--EALEKAEASVREKGVE-ARSYVCDVTSEEAVIGTVD   74 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHTTTSC-EEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCc-EEEEEccCCCHHHHHHHHH
Confidence            46788999999999999999999874       799999974  5565555555432110 0001110 11         


Q ss_pred             -hhhhcCCCcEEEEeCCCCCCCC----CCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           75 -AVEACTGVNIAVMVGGFPRKEG----MERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        75 -~~~al~~aDiVi~~ag~~~~~~----~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                       ..+.+...|++|..||.....+    .+.+   ..+..|+    ..++...+.+.+..  .+.+|+++....       
T Consensus        75 ~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~--~G~II~isS~~~-------  145 (260)
T d1zema1          75 SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN--YGRIVNTASMAG-------  145 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCHHH-------
T ss_pred             HHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc--CCCCCeeechhh-------
Confidence             1233457899999999753221    2333   3344555    45566667666653  467888875332       


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .  .+.|..-.++.+.---..|-+.+|..++  +.+|+
T Consensus       146 ~--~~~~~~~~Y~asKaal~~ltk~lA~el~--~~gIr  179 (260)
T d1zema1         146 V--KGPPNMAAYGTSKGAIIALTETAALDLA--PYNIR  179 (260)
T ss_dssp             H--SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             c--cCCcchHHHHHHHHHHHHHHHHHHHHhh--hhCCE
Confidence            1  1222212355555555677888888775  45676

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.35  E-value=0.0023  Score=54.54  Aligned_cols=154  Identities=16%  Similarity=0.154  Sum_probs=88.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEee-CC--------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVAT-TD--------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~-~~--------   74 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++....... ...+... ++        
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga-------~V~i~~r~~--~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~   74 (258)
T d1iy8a_           4 DRVVLITGGGSGLGRATAVRLAAEGA-------KLSLVDVSS--EGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV   74 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHH
Confidence            35788999999999999999999884       799999984  55554444443321110 0001110 11        


Q ss_pred             --hhhhcCCCcEEEEeCCCCCCC----CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           75 --AVEACTGVNIAVMVGGFPRKE----GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~~----~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                        ..+.+...|++|..||+....    ..+.+   ..+..|+    ...+.+.+.+++..  .+.||+++.....     
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--~G~Ii~isS~~~~-----  147 (258)
T d1iy8a_          75 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG--SGMVVNTASVGGI-----  147 (258)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECCGGGT-----
T ss_pred             HHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc--CCCCcccccHhhc-----
Confidence              123345789999999964322    12333   3445554    45556666666654  3567777754331     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.|..-.++.++---..|-+.+|..++  +.+|+
T Consensus       148 ----~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIr  180 (258)
T d1iy8a_         148 ----RGIGNQSGYAAAKHGVVGLTRNSAVEYG--RYGIR  180 (258)
T ss_dssp             ----SBCSSBHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             ----cCCCCchHHHHHHHHHHHHHHHHHHHhC--ccCce
Confidence                1122111344444445567777887775  45666

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.35  E-value=0.00083  Score=57.19  Aligned_cols=156  Identities=13%  Similarity=0.134  Sum_probs=88.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC----ccceEeeC------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL----LKGVVATT------   73 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~----~~~~~~~~------   73 (332)
                      +.+.+.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++.+.....    ..+++...      
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-------~V~i~~r~~--~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~   74 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-------SVVVASRNL--EEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL   74 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHH
Confidence            456889999999999999999999874       799999984  45544444453321110    00110000      


Q ss_pred             -ChhhhcCCCcEEEEeCCCCCCCC---CCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           74 -DAVEACTGVNIAVMVGGFPRKEG---MERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        74 -~~~~al~~aDiVi~~ag~~~~~~---~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                       ...+.+...|++|..||......   .+.+   ..+..|+    ...+.+++.+++..  .+.+|+++.-...      
T Consensus        75 ~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--~G~Ii~i~S~~~~------  146 (251)
T d1vl8a_          75 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD--NPSIINIGSLTVE------  146 (251)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS--SCEEEEECCGGGT------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc--cccccccccchhc------
Confidence             11233457899999999754321   2333   3345555    55666677776654  3566666532110      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .  .+.+..-.++.++---..|-+.+|..++  +..|+
T Consensus       147 ~--~~~~~~~~Y~asKaal~~lt~~lA~e~~--~~gIr  180 (251)
T d1vl8a_         147 E--VTMPNISAYAASKGGVASLTKALAKEWG--RYGIR  180 (251)
T ss_dssp             C--CCSSSCHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             c--ccCccccchHHHHHhHHHHHHHHHHHhc--ccCeE
Confidence            0  1112111344444445566777777765  34555

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.0018  Score=54.86  Aligned_cols=119  Identities=20%  Similarity=0.178  Sum_probs=75.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---------   74 (332)
                      -+.+.||||++.+|..++..|++.|.       .|.+.|+++  ++++..+.++...... ...+... ++         
T Consensus         7 Gkv~lITGas~GIG~~ia~~la~~G~-------~V~l~~r~~--~~l~~~~~~~~~~~~~-~~~~~~Dvs~~~~v~~~~~   76 (244)
T d1yb1a_           7 GEIVLITGAGHGIGRLTAYEFAKLKS-------KLVLWDINK--HGLEETAAKCKGLGAK-VHTFVVDCSNREDIYSSAK   76 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCC-EEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCc-EEEEEeeCCCHHHHHHHHH
Confidence            35788999999999999999999874       799999984  6666555555432110 0001110 11         


Q ss_pred             -hhhhcCCCcEEEEeCCCCCCCCC------CHHHHHHhh----HHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           75 -AVEACTGVNIAVMVGGFPRKEGM------ERKDVMSKN----VSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        75 -~~~al~~aDiVi~~ag~~~~~~~------~r~~~~~~n----~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                       ..+.+...|++|..||.......      ..++.+..|    ...++.+.+.+.+..  .++||+++....
T Consensus        77 ~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~G~Iv~isS~~~  146 (244)
T d1yb1a_          77 KVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN--HGHIVTVASAAG  146 (244)
T ss_dssp             HHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEEECCCC-
T ss_pred             HHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC--CceEEEeecchh
Confidence             12345679999999998653321      122334444    356677788887754  467888876544

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.31  E-value=0.0017  Score=55.67  Aligned_cols=157  Identities=14%  Similarity=0.068  Sum_probs=89.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---------   73 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---------   73 (332)
                      +.+++.|+||++.+|.+++..|+..|.       +|.+.|++. ++.++....++....... .-+... +         
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-------~Vvi~~~~~-~~~~~~~~~~~~~~g~~~-~~~~~D~~~~~~v~~~~   87 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-------KVIVNYANS-TESAEEVVAAIKKNGSDA-ACVKANVGVVEDIVRMF   87 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHTTCCE-EEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEeCCc-hHHHHHHHHHHHhhCCce-eeEeCCCCCHHHHHHHH
Confidence            347899999999999999999999874       789999874 344443333333221100 000000 1         


Q ss_pred             -ChhhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           74 -DAVEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        74 -~~~~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                       ...+.+..-|++|..+|......   .+   ....+..|+.-.-.+.+.+..+-.+...+++++.-...         .
T Consensus        88 ~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~---------~  158 (272)
T d1g0oa_          88 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ---------A  158 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGT---------C
T ss_pred             HHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccc---------c
Confidence             12344567899999998754321   22   33445566655555555555554444556666543321         1


Q ss_pred             CCCCCc-EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~-i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.++.. .++.++---..+-+.+|..++  +..|+
T Consensus       159 ~~~~~~~~Y~asKaal~~ltk~lA~e~~--~~gIr  191 (272)
T d1g0oa_         159 KAVPKHAVYSGSKGAIETFARCMAIDMA--DKKIT  191 (272)
T ss_dssp             SSCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHhc--hhCeE
Confidence            111122 344454444567777888776  34555

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.29  E-value=0.00028  Score=53.94  Aligned_cols=37  Identities=19%  Similarity=0.481  Sum_probs=31.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN   52 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~   52 (332)
                      |||.|+| .|.+|+.++..|...|.       +++++|.++  ++++
T Consensus         1 M~IvI~G-~G~~G~~la~~L~~~g~-------~v~vid~d~--~~~~   37 (132)
T d1lssa_           1 MYIIIAG-IGRVGYTLAKSLSEKGH-------DIVLIDIDK--DICK   37 (132)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCC-------CcceecCCh--hhhh
Confidence            6999999 69999999999988763       899999884  4443

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.00018  Score=61.55  Aligned_cols=152  Identities=14%  Similarity=0.145  Sum_probs=88.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-------CChhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-------TDAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-------~~~~~   77 (332)
                      .+.+.|+||++.+|.+++..|+..|.       +|.+.|+++  +.++....++.+... ...+++..       ....+
T Consensus         6 GK~alITGas~GIG~aia~~la~~Ga-------~V~i~~r~~--~~~~~~~~~~~~~~~-~~~Dvs~~~~v~~~~~~~~~   75 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNSGA-------RVVICDKDE--SGGRALEQELPGAVF-ILCDVTQEDDVKTLVSETIR   75 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHCTTEEE-EECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHhcCCCeE-EEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999874       799999984  455444333332111 00010000       01223


Q ss_pred             hcCCCcEEEEeCCCCCCCC----CCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           78 ACTGVNIAVMVGGFPRKEG----MERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~----~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                      .+...|++|..||.....+    .+.+   ..+..|+    ..++...+.+++.  . +.+|+++....       ..  
T Consensus        76 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~-G~Ii~isS~~~-------~~--  143 (250)
T d1ydea1          76 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--Q-GNVINISSLVG-------AI--  143 (250)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--T-CEEEEECCHHH-------HH--
T ss_pred             hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--C-CCCcccccccc-------cc--
Confidence            3457899999999653222    2333   3344554    5566777777654  2 46777775332       11  


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       144 ~~~~~~~Y~asKaal~~lt~~lA~e~a--~~gIr  175 (250)
T d1ydea1         144 GQAQAVPYVATKGAVTAMTKALALDES--PYGVR  175 (250)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             cccCcchhHHHHhhHHHHHHHHHHHhc--ccCeE
Confidence            122222345555555677777888775  45565

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.25  E-value=0.0013  Score=55.59  Aligned_cols=160  Identities=17%  Similarity=0.236  Sum_probs=91.7

Q ss_pred             cE-EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeC-------C
Q 020022            6 VR-VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT-------D   74 (332)
Q Consensus         6 ~k-I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~-------~   74 (332)
                      ++ |.||||++.+|.+++..|+..|.-.......+.++|+++  +.++....++......   ...+++-..       .
T Consensus         1 K~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~--~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~   78 (240)
T d2bd0a1           1 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA--ADLEKISLECRAEGALTDTITADISDMADVRRLTTH   78 (240)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH--HHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            35 568999999999999999988742111112488999874  5565555555432110   000110000       1


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           75 AVEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      ..+.+...|++|..||......   .+.   +..+..|+    ..++.+.+.+++..  .+.+|+++.-...        
T Consensus        79 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--~G~Ii~isS~~~~--------  148 (240)
T d2bd0a1          79 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH--SGHIFFITSVAAT--------  148 (240)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT--------
T ss_pred             HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC--CCceEEEechhhc--------
Confidence            2234457899999999764321   232   33445554    56677778777754  4678888754331        


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                       .+.|..-.++.++---..|-+.++..+.  +.+|+
T Consensus       149 -~~~~~~~~Y~asK~al~~lt~~la~el~--~~gIr  181 (240)
T d2bd0a1         149 -KAFRHSSIYCMSKFGQRGLVETMRLYAR--KCNVR  181 (240)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHT--TTTEE
T ss_pred             -CCCCCChHHHHHHHHHHHHHHHHHHHhC--cCCeE
Confidence             1233222345555445567777777765  45676

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.25  E-value=0.0014  Score=55.80  Aligned_cols=153  Identities=16%  Similarity=0.153  Sum_probs=88.3

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeC-------Chhh
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATT-------DAVE   77 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~-------~~~~   77 (332)
                      +.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++.+.....   ..+++...       ...+
T Consensus         5 alITGas~GIG~aia~~la~~Ga-------~V~i~~r~~--~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~   75 (257)
T d2rhca1           5 ALVTGATSGIGLEIARRLGKEGL-------RVFVCARGE--EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE   75 (257)
T ss_dssp             EEEESCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            46899999999999999999874       799999974  56665555554322110   00110000       1123


Q ss_pred             hcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhh----cCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           78 ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQH----AAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~----~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      .+...|++|..||......   .+   .++.+..|+.-.-.+.+.+-.+    ....+.+|+++.-...         .+
T Consensus        76 ~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~---------~~  146 (257)
T d2rhca1          76 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK---------QG  146 (257)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGT---------SC
T ss_pred             HhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccc---------cc
Confidence            3457899999999864321   23   3345667766555555544321    1123566666543321         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .|..-.++.++---..|-+.+|..++  +..|+
T Consensus       147 ~~~~~~Y~asKaal~~ltk~lA~el~--~~gIr  177 (257)
T d2rhca1         147 VVHAAPYSASKHGVVGFTKALGLELA--RTGIT  177 (257)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTT--TSEEE
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhh--hhCcE
Confidence            22222345555555677888888876  45676

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.24  E-value=0.0017  Score=55.29  Aligned_cols=156  Identities=12%  Similarity=0.096  Sum_probs=85.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccce---Eee----
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGV---VAT----   72 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~~---~~~----   72 (332)
                      |.-+.+.|.||||++.+|..+|..|+..|.       .+.+. |.++.   ++.. .++..........+   ..+    
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~-------~vii~~r~~~~---~~~~-~~~~~~~~~~~~~~~~~d~~~~~~   69 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNL-------KNFVILDRVEN---PTAL-AELKAINPKVNITFHTYDVTVPVA   69 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCC-------SEEEEEESSCC---HHHH-HHHHHHCTTSEEEEEECCTTSCHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEECCccc---HHHH-HHHHhhCCCCCEEEEEeecCCCHH
Confidence            666778999999999999999999999874       34455 54432   2211 12221110000000   000    


Q ss_pred             ------CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHH----HHHHHHHHHHhhc-CCCeEEEEecCcccchHHHH
Q 020022           73 ------TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVS----IYKAQASALEQHA-APNCKVLVVANPANTNALIL  141 (332)
Q Consensus        73 ------~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~----i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~~  141 (332)
                            ....+.+...|++|..||...  ..+.+..+..|+.    ..+.+.+.+.+.. .+.+.||+++.-...     
T Consensus        70 ~~~~~~~~~~~~~g~iDilvnnAG~~~--~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~-----  142 (254)
T d1sbya1          70 ESKKLLKKIFDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF-----  142 (254)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT-----
T ss_pred             HHHHHHHHHHHHcCCCCEEEeCCCCCC--HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc-----
Confidence                  011233467899999999764  3455666777764    6667777775542 134677777643321     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.|..-.++.+.--...|-+.+|..+.  +..|+
T Consensus       143 ----~~~~~~~~Y~asKaal~~~t~~la~el~--~~gIr  175 (254)
T d1sbya1         143 ----NAIHQVPVYSASKAAVVSFTNSLAKLAP--ITGVT  175 (254)
T ss_dssp             ----SCCTTSHHHHHHHHHHHHHHHHHHHHHH--HHSEE
T ss_pred             ----cCCCCCHHHHHHHHHHHHHHHHHHhhcc--ccCeE
Confidence                1112111334444444556666666543  34555

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.23  E-value=0.0032  Score=54.05  Aligned_cols=153  Identities=14%  Similarity=0.150  Sum_probs=86.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeCC---------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATTD---------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~~---------   74 (332)
                      .+++.|+||++.+|.+++..|+..|.       .|++.|+++  ++++..+.++....... .++. +..|         
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga-------~V~~~~r~~--~~l~~~~~~i~~~~~~~-~~~~~~~~Dv~~~~~v~~   73 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKEGA-------QVTITGRNE--DRLEETKQQILKAGVPA-EKINAVVADVTEASGQDD   73 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCCG-GGEEEEECCTTSHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHcCCCC-cceEEEEeeCCCHHHHHH
Confidence            46789999999999999999999874       799999984  56665555554432111 1111 1111         


Q ss_pred             ----hhhhcCCCcEEEEeCCCCCCCC-----CCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022           75 ----AVEACTGVNIAVMVGGFPRKEG-----MERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNA  138 (332)
Q Consensus        75 ----~~~al~~aDiVi~~ag~~~~~~-----~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~  138 (332)
                          ..+.+...|++|..||.....+     ++.+   ..+..|+    ...+...+.+.+..  ..++++.|.-...  
T Consensus        74 ~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--~g~ii~~ss~~~~--  149 (274)
T d1xhla_          74 IINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGP--  149 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGSS--
T ss_pred             HHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc--cccccchhhhhcc--
Confidence                1223346799999998653221     2322   3344454    45666677666543  4556555422110  


Q ss_pred             HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                             .+.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       150 -------~~~~~~~~Y~asKaal~~ltk~lA~ela--~~gIr  182 (274)
T d1xhla_         150 -------QAHSGYPYYACAKAALDQYTRCTAIDLI--QHGVR  182 (274)
T ss_dssp             -------SCCTTSHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             -------ccCCCCceehhhhhHHHHHHHHHHHHHh--HhCCc
Confidence                   1112111234444444566777777775  44565

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.20  E-value=0.00032  Score=59.36  Aligned_cols=153  Identities=18%  Similarity=0.221  Sum_probs=87.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch-hhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-EALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      +.+++.|+||++.+|.+++..|+..|.       +|.+.|+++.. +.+.....|+.+....  ..  ......+.+..-
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-------~V~~~~r~~~~~~~~~~~~~Dv~~~~~v--~~--~~~~~~~~~g~i   74 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-------KVAVTHRGSGAPKGLFGVEVDVTDSDAV--DR--AFTAVEEHQGPV   74 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSSCCCTTSEEEECCTTCHHHH--HH--HHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCcchhcCceEEEEecCCHHHH--HH--HHHHHHHhcCCc
Confidence            347899999999999999999999874       79999997521 1111222343332210  00  001233445678


Q ss_pred             cEEEEeCCCCCCC---CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc
Q 020022           83 NIAVMVGGFPRKE---GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN  152 (332)
Q Consensus        83 DiVi~~ag~~~~~---~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~  152 (332)
                      |++|..||.....   ..+.+   ..+..|+    ...+.+.+.+.+..  .+.||++|.-....         +.+..-
T Consensus        75 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--~g~Iv~isS~~~~~---------~~~~~~  143 (237)
T d1uzma1          75 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK--FGRMIFIGSVSGLW---------GIGNQA  143 (237)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEEECCCCC--------------CCH
T ss_pred             eEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC--CCceEEEcchhhcc---------CCcccH
Confidence            9999999975422   22333   3455555    44566777777654  46777887543311         111111


Q ss_pred             EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          153 ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       153 i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .++.++---..|-+.+|..+.  +.+|+
T Consensus       144 ~Y~asKaal~~lt~~lA~e~~--~~gIr  169 (237)
T d1uzma1         144 NYAASKAGVIGMARSIARELS--KANVT  169 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             HHHHHHHHHHHHHHHHHhhhh--cCCce
Confidence            234444444567777777765  45665

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.19  E-value=0.00023  Score=57.12  Aligned_cols=46  Identities=20%  Similarity=0.160  Sum_probs=36.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD   60 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~   60 (332)
                      |||+||||+|.+|+++|..|+..|.       +|.+.++++  ++++....++..
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~-------~V~l~~R~~--e~~~~l~~~i~~   46 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGH-------EIVVGSRRE--EKAEAKAAEYRR   46 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-------EEEEEESSH--HHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHh
Confidence            6999996689999999999998874       899999984  566655555544

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.19  E-value=0.0019  Score=55.00  Aligned_cols=163  Identities=10%  Similarity=0.051  Sum_probs=86.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC--------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD--------   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~--------   74 (332)
                      +.+++.|+||++.+|.+++..|+..|.       .|.+.|+++  +.+.....++..........+... ++        
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-------~V~i~~r~~--~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~   78 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-------NVAVIYRSA--ADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTI   78 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-------EEEEEESSC--TTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHH
Confidence            457889999999999999999999875       799999985  334333333422111000001110 11        


Q ss_pred             --hhhhcCCCcEEEEeCCCCCCCC---CCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           75 --AVEACTGVNIAVMVGGFPRKEG---MERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~~~~---~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                        ..+.+...|++|..||......   .+.+   ..+..|+    ...+.+.+.+.+... ...+++.+.......... 
T Consensus        79 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~-~g~i~~~~s~~~~~~~~~-  156 (260)
T d1h5qa_          79 QQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ-KGSIVVTSSMSSQIINQS-  156 (260)
T ss_dssp             HHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-CEEEEEECCGGGTSCCEE-
T ss_pred             HHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccccc-ceEEEEeecccccccccc-
Confidence              1233457899999998754221   2333   3455555    455666777765553 455555443221100000 


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .. .+.+..-.++.++---..+-+.+|..++  +..|+
T Consensus       157 ~~-~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIr  191 (260)
T d1h5qa_         157 SL-NGSLTQVFYNSSKAACSNLVKGLAAEWA--SAGIR  191 (260)
T ss_dssp             ET-TEECSCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             cc-ccCccccchhhhhhhHHHHHHHHHHHhc--hhCeE
Confidence            00 0001111233344444566777777765  45565

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.0022  Score=54.95  Aligned_cols=155  Identities=17%  Similarity=0.155  Sum_probs=85.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-----------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-----------   73 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-----------   73 (332)
                      .+++.|+||++.+|.++|..|+..|.       .|.+.++++  +.++....++..........+....           
T Consensus        14 GK~alITGassGIG~aiA~~la~~G~-------~Vil~~r~~--~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   84 (269)
T d1xu9a_          14 GKKVIVTGASKGIGREMAYHLAKMGA-------HVVVTARSK--ETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA   84 (269)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHH
Confidence            46899999999999999999999874       799999984  5665444444322111000111110           


Q ss_pred             ChhhhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022           74 DAVEACTGVNIAVMVGGFPRKE---GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKE  143 (332)
Q Consensus        74 ~~~~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~  143 (332)
                      ...+.....|+++..||.....   ..+.+   ..+..|+    ...+.+.+.+++.  . +.+++++.....       
T Consensus        85 ~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~-G~ii~isS~~~~-------  154 (269)
T d1xu9a_          85 QAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--N-GSIVVVSSLAGK-------  154 (269)
T ss_dssp             HHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--T-CEEEEEEEGGGT-------
T ss_pred             HHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--C-CcceEeccchhc-------
Confidence            1122345689999988865322   12333   2334443    5566667776543  2 456666543321       


Q ss_pred             hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        .++|..-.++.+.---..|-+.|+..+.....+|+
T Consensus       155 --~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~  189 (269)
T d1xu9a_         155 --VAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS  189 (269)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEE
Confidence              12332223444544445566666665543223444

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.17  E-value=0.0031  Score=53.69  Aligned_cols=155  Identities=15%  Similarity=0.181  Sum_probs=89.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCC------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTD------   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~------   74 (332)
                      +.+.+.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++.......   ..+++...+      
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-------~V~~~~r~~--~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~   77 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-------SVYTCSRNQ--KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMN   77 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHH
Confidence            356889999999999999999999874       799999974  55654444444321100   001000000      


Q ss_pred             -hhhhcC-CCcEEEEeCCCCCCCC---CCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           75 -AVEACT-GVNIAVMVGGFPRKEG---MERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        75 -~~~al~-~aDiVi~~ag~~~~~~---~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                       ..+.+. ..|++|..||......   .+.+   ..+..|+.    ..+...+.+.+..  .+.||+++.-...      
T Consensus        78 ~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--~G~Ii~isS~~~~------  149 (259)
T d2ae2a_          78 TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE--RGNVVFISSVSGA------  149 (259)
T ss_dssp             HHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS--SEEEEEECCGGGT------
T ss_pred             HHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc--ccccccccccccc------
Confidence             112233 4799999999764322   2333   34555653    4556666666543  4677777753321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       150 ---~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIr  182 (259)
T d2ae2a_         150 ---LAVPYEAVYGATKGAMDQLTRCLAFEWA--KDNIR  182 (259)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEE
T ss_pred             ---cccccccchHHHHHHHHHHHHHHHHHhC--cCceE
Confidence               1122112344444444567777888775  45665

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.0046  Score=53.70  Aligned_cols=153  Identities=17%  Similarity=0.145  Sum_probs=90.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceE-eeCC--------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVV-ATTD--------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~-~~~~--------   74 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|++.|+++  ++++..+.++..... ....++. +..|        
T Consensus        12 gKvalITGas~GIG~aia~~la~~Ga-------~Vvi~~r~~--~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~   82 (297)
T d1yxma1          12 GQVAIVTGGATGIGKAIVKELLELGS-------NVVIASRKL--ERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN   82 (297)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHH
Confidence            46889999999999999999999874       799999984  566655555543211 1111111 1111        


Q ss_pred             -----hhhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           75 -----AVEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        75 -----~~~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                           ..+.+..-|++|..||......   .+   .+..+..|+    -.++..++.+.+..  ...+|++|....    
T Consensus        83 ~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--~g~Ii~~ss~~~----  156 (297)
T d1yxma1          83 NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH--GGSIVNIIVPTK----  156 (297)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH--CEEEEEECCCCT----
T ss_pred             HHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc--cccccccccccc----
Confidence                 1123457899999998754221   22   334455564    45566667766665  345666654321    


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                            .+.|..-.++.+.---..|-+.+|..++  +..|+
T Consensus       157 ------~~~~~~~~Y~asKaal~~ltk~lA~el~--~~gIr  189 (297)
T d1yxma1         157 ------AGFPLAVHSGAARAGVYNLTKSLALEWA--CSGIR  189 (297)
T ss_dssp             ------TCCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEE
T ss_pred             ------ccccccccchhHHHHHHHHHHHHHHHhc--ccCce
Confidence                  1222222334444445677788888775  45665

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.15  E-value=0.0066  Score=51.52  Aligned_cols=154  Identities=18%  Similarity=0.230  Sum_probs=89.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC--------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD--------   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~--------   74 (332)
                      +.+++.|+||++.+|.+++..|+..|.       .|++.|+++  +.++....++....... .-+... ++        
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-------~V~i~~r~~--~~l~~~~~~~~~~~~~~-~~~~~D~s~~~~~~~~~   74 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-------RVYTCSRNE--KELDECLEIWREKGLNV-EGSVCDLLSRTERDKLM   74 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCCE-EEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCCc-eEEEeecCCHHHHHHHH
Confidence            456899999999999999999999874       799999984  45544434443321110 001110 11        


Q ss_pred             --hhhhcC-CCcEEEEeCCCCCCCC---CCHHH---HHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022           75 --AVEACT-GVNIAVMVGGFPRKEG---MERKD---VMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALIL  141 (332)
Q Consensus        75 --~~~al~-~aDiVi~~ag~~~~~~---~~r~~---~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~  141 (332)
                        ..+.+. .-|++|..||......   .+.++   .+..|+    ..++.+.+.+.+..  .+.+|+++.....     
T Consensus        75 ~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~--~g~ii~isS~~~~-----  147 (258)
T d1ae1a_          75 QTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ--NGNVIFLSSIAGF-----  147 (258)
T ss_dssp             HHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--SEEEEEECCGGGT-----
T ss_pred             HHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc--ccccccccccccc-----
Confidence              112232 3789999998764321   23332   333343    45566666776654  4667777755432     


Q ss_pred             HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          .+.|..-.++.+.---..|-+.+|+.++  +..|+
T Consensus       148 ----~~~~~~~~Y~~sK~al~~lt~~lA~el~--~~gIr  180 (258)
T d1ae1a_         148 ----SALPSVSLYSASKGAINQMTKSLACEWA--KDNIR  180 (258)
T ss_dssp             ----SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ----cccccchhHHHHHHHHHHHHHHHHHhcC--cCcEE
Confidence                1223222344455455677778888877  34555

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.0062  Score=51.53  Aligned_cols=117  Identities=19%  Similarity=0.137  Sum_probs=73.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-ee---CC------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-AT---TD------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~---~~------   74 (332)
                      .+.+.||||++.+|.+++..|+..|.       .|.+.|+++  +.++....++.....  ..++. ..   ++      
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga-------~V~i~~r~~--~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~   71 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGA-------KVALVDWNL--EAGVQCKAALHEQFE--PQKTLFIQCDVADQQQLRD   71 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHTTTSC--GGGEEEEECCTTSHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHhcC--CCcEEEEEeecCCHHHHHH
Confidence            35788999999999999999999874       799999984  455444444432210  01111 11   11      


Q ss_pred             ----hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhH----HHHHHHHHHHHhhcC-CCeEEEEecCcc
Q 020022           75 ----AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNV----SIYKAQASALEQHAA-PNCKVLVVANPA  134 (332)
Q Consensus        75 ----~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~----~i~~~i~~~i~~~~~-~~~~viv~tNP~  134 (332)
                          ..+.+...|++|..||....  .+.++.+..|+    ...+...+.+.+... ..+.||+++...
T Consensus        72 ~~~~~~~~~G~iDilVnnAg~~~~--~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~  138 (254)
T d2gdza1          72 TFRKVVDHFGRLDILVNNAGVNNE--KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA  138 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCS--SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred             HHHHHHHHcCCcCeeccccccccc--ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh
Confidence                11234578999999998743  34555665565    455666676665432 236677777543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.13  E-value=0.0028  Score=53.98  Aligned_cols=155  Identities=17%  Similarity=0.164  Sum_probs=85.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCC------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTD------   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~------   74 (332)
                      +.+++.|+||++.+|.+++..|+..|.       .|++.|+++  +.++....++.......   ..+++...+      
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-------~V~~~~r~~--~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   77 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-------VIHTCARNE--YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQ   77 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHH
Confidence            457899999999999999999999874       799999984  55554444444321110   001100000      


Q ss_pred             -hhhhcCC-CcEEEEeCCCCCCC---CCCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           75 -AVEACTG-VNIAVMVGGFPRKE---GMER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        75 -~~~al~~-aDiVi~~ag~~~~~---~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                       ..+.+.+ .|++|..||.....   ..+.   +..+..|+    ..++...+.+++..  .+.||++|.-....     
T Consensus        78 ~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--~G~Iv~isS~~~~~-----  150 (259)
T d1xq1a_          78 TVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG--CGNIIFMSSIAGVV-----  150 (259)
T ss_dssp             HHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SCEEEEEC-----------
T ss_pred             HHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc--cccccccccccccc-----
Confidence             1122333 79999999975421   2333   33445555    44566666666654  35677776433210     


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                          +.+..-.++.++---..|-+.+|..++  +..|+
T Consensus       151 ----~~~~~~~Y~asKaal~~lt~~lA~e~~--~~gIr  182 (259)
T d1xq1a_         151 ----SASVGSIYSATKGALNQLARNLACEWA--SDGIR  182 (259)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             ----cccccccccccccchhhhhHHHHHHhc--ccCeE
Confidence                112112344455455567777877765  34555

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.12  E-value=0.0021  Score=55.03  Aligned_cols=155  Identities=15%  Similarity=0.119  Sum_probs=89.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCC-------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTD-------   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~-------   74 (332)
                      +.+.+.|+||++.+|.+++..|+..|.       +|.+.|+++  +.++....++......  ...+++...+       
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-------~V~i~~r~~--~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-------KVVIADIAD--DHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDT   75 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHH
Confidence            346788999999999999999999874       799999974  5555444444321100  0001100001       


Q ss_pred             hhhhcCCCcEEEEeCCCCCC-C----CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           75 AVEACTGVNIAVMVGGFPRK-E----GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~-~----~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                      ..+.+...|++|..||.... +    ..+.+   ..+..|+    -.++...+.+.+..  .+.+|+++.....      
T Consensus        76 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--~g~ii~iss~~~~------  147 (268)
T d2bgka1          76 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK--KGSIVFTASISSF------  147 (268)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT--CEEEEEECCGGGT------
T ss_pred             HHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC--CCCcccccccccc------
Confidence            12334578999999997432 1    22323   3344554    45666677776654  3567777654331      


Q ss_pred             HhCCCCCCCc-EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~-i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.+... .++.++---..|-+.+|..++  +..|+
T Consensus       148 ---~~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIr  181 (268)
T d2bgka1         148 ---TAGEGVSHVYTATKHAVLGLTTSLCTELG--EYGIR  181 (268)
T ss_dssp             ---CCCTTSCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---ccccccccccchhHHHHHhCHHHHHHHhC--hhCeE
Confidence               1111112 344444555677777887775  45665

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.11  E-value=0.004  Score=53.09  Aligned_cols=153  Identities=14%  Similarity=0.160  Sum_probs=84.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeCC---------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATTD---------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~~---------   74 (332)
                      .+.+.|+||++.+|.+++..|+..|.       +|.+.|+++  +.++..+.++...... ..++. +..|         
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga-------~V~~~~r~~--~~l~~~~~~l~~~~~~-~~~~~~~~~Dvt~~~~v~~   74 (264)
T d1spxa_           5 EKVAIITGSSNGIGRATAVLFAREGA-------KVTITGRHA--ERLEETRQQILAAGVS-EQNVNSVVADVTTDAGQDE   74 (264)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHTTCC-GGGEEEEECCTTSHHHHHH
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCC-cCceEEEEccCCCHHHHHH
Confidence            35677889999999999999999874       799999984  5665555555443211 01111 1111         


Q ss_pred             ----hhhhcCCCcEEEEeCCCCCCC-------CCCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022           75 ----AVEACTGVNIAVMVGGFPRKE-------GMER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANT  136 (332)
Q Consensus        75 ----~~~al~~aDiVi~~ag~~~~~-------~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~  136 (332)
                          ..+.+...|++|..||.....       ..+.   +..+..|+    ..++...+.+++..  ..+|++.|--...
T Consensus        75 ~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~S~~~~~  152 (264)
T d1spxa_          75 ILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGL  152 (264)
T ss_dssp             HHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSS
T ss_pred             HHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc--Ccceeeeeecccc
Confidence                122345789999999874211       1232   23444555    45667777776542  3444444322111


Q ss_pred             hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                               .+.|..-.++.++---..|-+.+|..++  +..|+
T Consensus       153 ---------~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIr  185 (264)
T d1spxa_         153 ---------HATPDFPYYSIAKAAIDQYTRNTAIDLI--QHGIR  185 (264)
T ss_dssp             ---------SCCTTSHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             ---------ccCCCchhhhhhhhhHHHHHHHHHHHhc--ccCeE
Confidence                     1122111344444445567777777765  44565

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.08  E-value=0.0011  Score=53.49  Aligned_cols=78  Identities=15%  Similarity=0.239  Sum_probs=44.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~al~~a   82 (332)
                      |+||+|+||+|++|.-+...|...+-      ++|.-+--... +...|....-.+...  .....+....+......++
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~------~ei~~l~~~s~-~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPH------MTITALTVSAQ-SNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADV   73 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTT------EEEEEEEEETT-CTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTC
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCC------CceEeeEeecc-cccccccccccccccccccccccccchhhhhhhccc
Confidence            57999999999999999999987542      24443321110 111222221111111  1122334444555667899


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+++++.
T Consensus        74 dvvf~al   80 (179)
T d2g17a1          74 DVVFLAT   80 (179)
T ss_dssp             CEEEECS
T ss_pred             ceeeccc
Confidence            9999884

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.08  E-value=0.00037  Score=56.56  Aligned_cols=78  Identities=17%  Similarity=0.129  Sum_probs=44.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      ++++.||+|+||+|++|+-+...|.....      +||..+--+.    -.|....-.+-...............+.+++
T Consensus         2 s~~kikVaIlGATGyvG~elirLL~~HP~------~ei~~l~S~~----~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (183)
T d2cvoa1           2 SGEEVRIAVLGASGYTGAEIVRLLANHPQ------FRIKVMTADR----KAGEQFGSVFPHLITQDLPNLVAVKDADFSN   71 (183)
T ss_dssp             CSSCEEEEEESCSSHHHHHHHHHHTTCSS------EEEEEEECST----TTTSCHHHHCGGGTTSCCCCCBCGGGCCGGG
T ss_pred             CCCccEEEEECcccHHHHHHHHHHHhCCC------ceEEEEeccc----cCCCccccccccccccccccchhhhhhhhcc
Confidence            35778999999999999999999987542      2666554322    1222111111111001111111223455678


Q ss_pred             CcEEEEeC
Q 020022           82 VNIAVMVG   89 (332)
Q Consensus        82 aDiVi~~a   89 (332)
                      +|+|+.+.
T Consensus        72 ~Dvvf~al   79 (183)
T d2cvoa1          72 VDAVFCCL   79 (183)
T ss_dssp             CSEEEECC
T ss_pred             cceeeecc
Confidence            99999885

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.08  E-value=0.0024  Score=54.06  Aligned_cols=151  Identities=17%  Similarity=0.166  Sum_probs=87.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-------eCChhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-------TTDAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-------~~~~~~   77 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|.+.|++++  .++ ....+.....++  +++-       .....+
T Consensus         5 GK~alITGas~GIG~aia~~la~~G~-------~V~~~~~~~~--~~~-~~~~~~~~~~~~--Dv~~~~~v~~~~~~~~~   72 (248)
T d2d1ya1           5 GKGVLVTGGARGIGRAIAQAFAREGA-------LVALCDLRPE--GKE-VAEAIGGAFFQV--DLEDERERVRFVEEAAY   72 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSTT--HHH-HHHHHTCEEEEC--CTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCHH--HHH-HHHHcCCeEEEE--eCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999874       7999999852  221 111111111111  1100       011234


Q ss_pred             hcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022           78 ACTGVNIAVMVGGFPRKE---GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS  147 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~  147 (332)
                      .+...|++|..||.....   ..+.+   ..+..|+    ...+.+.+.+++..  .+.||+++.....         .+
T Consensus        73 ~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--~G~Ii~isS~~~~---------~~  141 (248)
T d2d1ya1          73 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG--GGAIVNVASVQGL---------FA  141 (248)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT--CEEEEEECCGGGT---------SB
T ss_pred             hcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc--ccccccccccccc---------cc
Confidence            456789999999975421   22333   3444554    55666677776653  4678888754431         12


Q ss_pred             CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .|..-.++.++---..|-+.+|+.++  +..|+
T Consensus       142 ~~~~~~Y~asKaal~~ltk~lA~el~--~~gIr  172 (248)
T d2d1ya1         142 EQENAAYNASKGGLVNLTRSLALDLA--PLRIR  172 (248)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHhh--hhCcE
Confidence            22222344444445677777888776  45666

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.05  E-value=0.0032  Score=54.39  Aligned_cols=154  Identities=7%  Similarity=0.017  Sum_probs=84.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC----------
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD----------   74 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~----------   74 (332)
                      +.+.|+||+|.+|.+++..|+..|.       +|.+.|+++  +++...+.++..........+... ++          
T Consensus        26 K~alITGas~GIG~aiA~~la~~Ga-------~Vii~~r~~--~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~   96 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSLGA-------QCVIASRKM--DVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE   96 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEECCH--HHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhh
Confidence            6788999999999999999999874       799999984  455544555543211100011110 01          


Q ss_pred             hhhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022           75 AVEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEF  144 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~  144 (332)
                      ..+.....|++|..||......   .+   ....+..|...    .+..+....... ....+++.+....       ..
T Consensus        97 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~i~~~ss~~~-------~~  168 (294)
T d1w6ua_          97 LIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQ-KGAAFLSITTIYA-------ET  168 (294)
T ss_dssp             HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEECCTHH-------HH
T ss_pred             hhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccccccc-ccccccccccchh-------hh
Confidence            1233457899999998754322   12   22233334332    334444444443 3444555554322       11


Q ss_pred             CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                        +.|..-.++.++---..+-+.+|..++  +..|+
T Consensus       169 --~~~~~~~YsasKaal~~ltk~lA~ela--~~gIr  200 (294)
T d1w6ua_         169 --GSGFVVPSASAKAGVEAMSKSLAAEWG--KYGMR  200 (294)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             --cccccchHHHHHHHHHHHHHHHHHHHh--HhCeE
Confidence              112111244444444567777888776  45666

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.99  E-value=0.0027  Score=50.06  Aligned_cols=73  Identities=18%  Similarity=0.215  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..+||+||| +|.+|..++..|...+. .     ++.++.++.  ++++.....+..       ......+..+++.++|
T Consensus        23 ~~~~ilviG-aG~~g~~v~~~L~~~g~-~-----~i~v~nRt~--~ka~~l~~~~~~-------~~~~~~~~~~~l~~~D   86 (159)
T d1gpja2          23 HDKTVLVVG-AGEMGKTVAKSLVDRGV-R-----AVLVANRTY--ERAVELARDLGG-------EAVRFDELVDHLARSD   86 (159)
T ss_dssp             TTCEEEEES-CCHHHHHHHHHHHHHCC-S-----EEEEECSSH--HHHHHHHHHHTC-------EECCGGGHHHHHHTCS
T ss_pred             ccCeEEEEC-CCHHHHHHHHHHHhcCC-c-----EEEEEcCcH--HHHHHHHHhhhc-------ccccchhHHHHhccCC
Confidence            357999999 59999999999998764 2     689998873  444333332211       1112246788899999


Q ss_pred             EEEEeCCCC
Q 020022           84 IAVMVGGFP   92 (332)
Q Consensus        84 iVi~~ag~~   92 (332)
                      +||.+-+.+
T Consensus        87 ivi~atss~   95 (159)
T d1gpja2          87 VVVSATAAP   95 (159)
T ss_dssp             EEEECCSSS
T ss_pred             EEEEecCCC
Confidence            999987654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=96.88  E-value=0.00064  Score=60.31  Aligned_cols=103  Identities=17%  Similarity=0.132  Sum_probs=58.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC----hhhh
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD----AVEA   78 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~----~~~a   78 (332)
                      +.++|+||||+|++|++++..|+..|.       +|+.+-++.+.  ..  ...+...  +...-+... .+    ...+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~~~~--~~--~~~~~~~--~~v~~~~gD~~d~~~~~~~a   68 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-------HVRAQVHSLKG--LI--AEELQAI--PNVTLFQGPLLNNVPLMDTL   68 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-------CEEEEESCSCS--HH--HHHHHTS--TTEEEEESCCTTCHHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-------eEEEEECCcch--hh--hhhhccc--CCCEEEEeeCCCcHHHHHHH
Confidence            457999999999999999999998763       56666665421  11  1111111  000000110 11    3467


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      +.++|.+++......          ..+....+.++....+.+..  +++++|
T Consensus        69 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~aa~~agv~--~~v~~S  109 (350)
T d1xgka_          69 FEGAHLAFINTTSQA----------GDEIAIGKDLADAAKRAGTI--QHYIYS  109 (350)
T ss_dssp             HTTCSEEEECCCSTT----------SCHHHHHHHHHHHHHHHSCC--SEEEEE
T ss_pred             hcCCceEEeeccccc----------chhhhhhhHHHHHHHHhCCC--ceEEEe
Confidence            889999888643221          23445556677777776533  344444

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.0084  Score=50.45  Aligned_cols=155  Identities=18%  Similarity=0.184  Sum_probs=86.7

Q ss_pred             CCcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C-------
Q 020022            4 EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T-------   73 (332)
Q Consensus         4 ~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~-------   73 (332)
                      +.++|.|+||+|  .+|.++|..|+..|.       +|++.|+++  + +.....++....... ...... +       
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-------~V~i~~~~~--~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   72 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA-------ELAFTYQND--K-LKGRVEEFAAQLGSD-IVLQCDVAEDASIDT   72 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-------EEEEEESST--T-THHHHHHHHHHTTCC-CEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC-------EEEEEeCCH--H-HHHHHHHHHhhcCCc-ceeecccchHHHHHH
Confidence            356899999877  688999999999874       799999874  2 222223332211110 000100 1       


Q ss_pred             ---ChhhhcCCCcEEEEeCCCCCCCCC--------CH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022           74 ---DAVEACTGVNIAVMVGGFPRKEGM--------ER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL  139 (332)
Q Consensus        74 ---~~~~al~~aDiVi~~ag~~~~~~~--------~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~  139 (332)
                         ...+.....|++|+.++.......        ..   ...+..|......+.+.+..+-.+...++++|.....   
T Consensus        73 ~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~---  149 (258)
T d1qsga_          73 MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE---  149 (258)
T ss_dssp             HHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT---
T ss_pred             HHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc---
Confidence               112334456899998876432211        11   1223445555555566655554444556666654321   


Q ss_pred             HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                            .+.|..-.++.+.---..+-+.+|+.++  +..|+
T Consensus       150 ------~~~~~~~~Y~~sKaal~~ltr~lA~el~--~~gIr  182 (258)
T d1qsga_         150 ------RAIPNYNVMGLAKASLEANVRYMANAMG--PEGVR  182 (258)
T ss_dssp             ------SBCTTTTHHHHHHHHHHHHHHHHHHHHT--TTTEE
T ss_pred             ------cCCCCcHHHHHHHHHHHHHHHHHHHHhC--ccCce
Confidence                  1223222455566666788888999887  56777

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.84  E-value=0.00031  Score=55.85  Aligned_cols=74  Identities=8%  Similarity=0.040  Sum_probs=45.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||.|+| +|.+|+++|..|...|.       +|+++|++.  ++++..+..+...... ...........+.+...|+
T Consensus         2 ~K~IliiG-aG~~G~~~a~~L~~~g~-------~V~v~dr~~--~~a~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~   70 (182)
T d1e5qa1           2 TKSVLMLG-SGFVTRPTLDVLTDSGI-------KVTVACRTL--ESAKKLSAGVQHSTPI-SLDVNDDAALDAEVAKHDL   70 (182)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTC-------EEEEEESCH--HHHHHHHTTCTTEEEE-ECCTTCHHHHHHHHTTSSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEECCh--HHHHHHHhcccccccc-cccccchhhhHhhhhccce
Confidence            46999999 59999999999998763       799999984  4443222222111000 0000011123456788888


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      ++.+.
T Consensus        71 ~i~~~   75 (182)
T d1e5qa1          71 VISLI   75 (182)
T ss_dssp             EEECS
T ss_pred             eEeec
Confidence            88763

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.82  E-value=0.0022  Score=50.14  Aligned_cols=87  Identities=15%  Similarity=0.111  Sum_probs=50.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh-hhhcCCccceEeeCChhhhcCCCcEE
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV-DAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~-~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      ||++|| .|.||+.++..|+..+.       .+ .+++..  ++.    .++. ....       . ....+.+.++|++
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~-------~~-~~~~~~--~~~----~~~~~~~~~-------~-~~~~~~~~~~~~~   58 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFP-------TL-VWNRTF--EKA----LRHQEEFGS-------E-AVPLERVAEARVI   58 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSC-------EE-EECSST--HHH----HHHHHHHCC-------E-ECCGGGGGGCSEE
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCC-------EE-EEeCCH--HHH----HHHHHHcCC-------c-ccccccccceeEE
Confidence            899999 89999999999987652       44 455442  222    1222 2211       1 2234667789998


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      |...-               +.+.+......+.....++.+++..|
T Consensus        59 i~~~~---------------~~~~v~~~~~~l~~~~~~~~~iid~s   89 (156)
T d2cvza2          59 FTCLP---------------TTREVYEVAEALYPYLREGTYWVDAT   89 (156)
T ss_dssp             EECCS---------------SHHHHHHHHHHHTTTCCTTEEEEECS
T ss_pred             Eeccc---------------chhhhhhhhccccccccccccccccc
Confidence            87631               12234445555666665665554443

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.79  E-value=0.008  Score=50.53  Aligned_cols=153  Identities=14%  Similarity=0.137  Sum_probs=89.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeC-------Chh
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT-------DAV   76 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~-------~~~   76 (332)
                      =|.|+||++.+|.+++..|+..|.       .|++.|.+. ++.++....++......   ...+++-..       ...
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-------~V~i~~~~~-~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   74 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-------KVLVNYARS-AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAI   74 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            367899999999999999999874       688877653 34444443444322110   000110000       112


Q ss_pred             hhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022           77 EACTGVNIAVMVGGFPRKEG---MER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP  146 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~  146 (332)
                      +.+...|++|..||......   .+.   +..+..|+    ...+...+.+.+..  .+.||++|.-..       ..  
T Consensus        75 ~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--~G~IVnisS~~~-------~~--  143 (244)
T d1edoa_          75 DAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR--KGRIINIASVVG-------LI--  143 (244)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCTHH-------HH--
T ss_pred             HHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC--CcEEEEEcChhh-------cC--
Confidence            33457899999999764321   232   33444454    56667777777653  467888875332       11  


Q ss_pred             CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +.|..-.++.++---..|-+.+|..++  +.+|+
T Consensus       144 ~~~~~~~Y~asKaal~~ltk~lA~el~--~~gIr  175 (244)
T d1edoa_         144 GNIGQANYAAAKAGVIGFSKTAAREGA--SRNIN  175 (244)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHH--TTTEE
T ss_pred             CCCCCHHHHHHHHHHHHChHHHHHHHh--hhCcE
Confidence            223222455566666678888888876  45676

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.72  E-value=0.0015  Score=51.84  Aligned_cols=80  Identities=15%  Similarity=0.175  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +|.||+|+| +|.+|..-+......|-       ++..+|.+.  ++++.....+..   .............+++++||
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lGA-------~V~~~D~~~--~~l~~l~~~~~~---~~~~~~~~~~~l~~~~~~aD   97 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLGA-------QVQIFDINV--ERLSYLETLFGS---RVELLYSNSAEIETAVAEAD   97 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESCH--HHHHHHHHHHGG---GSEEEECCHHHHHHHHHTCS
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCCC-------EEEEEeCcH--HHHHHHHHhhcc---cceeehhhhhhHHHhhccCc
Confidence            468999999 69999998887777653       799999984  444322111111   00001111124578899999


Q ss_pred             EEEEeCCCCCCCC
Q 020022           84 IAVMVGGFPRKEG   96 (332)
Q Consensus        84 iVi~~ag~~~~~~   96 (332)
                      +||-++-+|-++.
T Consensus        98 ivI~aalipG~~a  110 (168)
T d1pjca1          98 LLIGAVLVPGRRA  110 (168)
T ss_dssp             EEEECCCCTTSSC
T ss_pred             EEEEeeecCCccc
Confidence            9999998775443

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.72  E-value=0.00088  Score=56.99  Aligned_cols=155  Identities=16%  Similarity=0.171  Sum_probs=85.3

Q ss_pred             CCcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C-------
Q 020022            4 EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T-------   73 (332)
Q Consensus         4 ~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~-------   73 (332)
                      +.+++.|+||+|  .+|.+++..|+..|.       +|++.|+++  + +.....++...... ...+... +       
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-------~V~i~~~~~--~-~~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~   75 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-------EVALSYQAE--R-LRPEAEKLAEALGG-ALLFRADVTQDEELDA   75 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-------EEEEEESSG--G-GHHHHHHHHHHTTC-CEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-------EEEEEeCcH--H-HHHHHHHhhhccCc-ccccccccCCHHHHHH
Confidence            346899999877  699999999999874       789999874  2 22222222221100 0001110 0       


Q ss_pred             ---ChhhhcCCCcEEEEeCCCCCC-------CCCCHHH---HHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022           74 ---DAVEACTGVNIAVMVGGFPRK-------EGMERKD---VMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI  140 (332)
Q Consensus        74 ---~~~~al~~aDiVi~~ag~~~~-------~~~~r~~---~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~  140 (332)
                         ...+.+...|++|..||....       .+.+..+   .+..|+...-.+++....+-.+.+.+|+++.-...    
T Consensus        76 ~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~----  151 (256)
T d1ulua_          76 LFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE----  151 (256)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT----
T ss_pred             HHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhc----
Confidence               112334578999999987431       1223332   34566655555555554443345667777643321    


Q ss_pred             HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                           .+.|..-.++.++---..+-+.+|..++  +..|+
T Consensus       152 -----~~~~~~~~Y~asKaal~~ltr~lA~ela--~~gIr  184 (256)
T d1ulua_         152 -----KVVPKYNVMAIAKAALEASVRYLAYELG--PKGVR  184 (256)
T ss_dssp             -----SBCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             -----CCCCCchHHHHHHHHHHHHHHHHHHHhc--ccCCE
Confidence                 1223222344455555667777888776  45565

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=96.69  E-value=0.00047  Score=53.85  Aligned_cols=62  Identities=8%  Similarity=0.021  Sum_probs=35.8

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEE
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVM   87 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~   87 (332)
                      |++|| +|.||++++..|...+.       ...+++++.  ++++.    +.+....      ...+..++++.+|+||+
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~-------~~~v~~R~~--~~~~~----l~~~~~~------~~~~~~~~~~~~DiVil   61 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYE-------IGYILSRSI--DRARN----LAEVYGG------KAATLEKHPELNGVVFV   61 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC-----------CCCEECSSH--HHHHH----HHHHTCC------CCCSSCCCCC---CEEE
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCC-------EEEEEeCCh--hhhcc----hhhcccc------cccchhhhhccCcEEEE
Confidence            78999 79999999987754321       235788763  44432    2222110      11345678999999999


Q ss_pred             eC
Q 020022           88 VG   89 (332)
Q Consensus        88 ~a   89 (332)
                      +.
T Consensus        62 ~v   63 (153)
T d2i76a2          62 IV   63 (153)
T ss_dssp             CS
T ss_pred             ec
Confidence            84

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.67  E-value=0.00045  Score=58.69  Aligned_cols=160  Identities=16%  Similarity=0.103  Sum_probs=82.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC--------
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD--------   74 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~--------   74 (332)
                      .++.|.||||++.+|.+++..|+..|..     ..|.+.++++  ++++.    +.........-+... ++        
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~-----~~Vi~~~R~~--~~~~~----l~~~~~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNI-----RHIIATARDV--EKATE----LKSIKDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTC-----CEEEEEESSG--GGCHH----HHTCCCTTEEEEECCTTCHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCC-----CEEEEEeCCH--HHHHH----HHHhhCCceEEEEEecCCHHHHHHHH
Confidence            5578999999999999999999987631     1577777764  44432    221110000001100 11        


Q ss_pred             --hhhhc--CCCcEEEEeCCCCCCC----CCCHH---HHHHhhH----HHHHHHHHHHHhhcCC---------CeEEEEe
Q 020022           75 --AVEAC--TGVNIAVMVGGFPRKE----GMERK---DVMSKNV----SIYKAQASALEQHAAP---------NCKVLVV  130 (332)
Q Consensus        75 --~~~al--~~aDiVi~~ag~~~~~----~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~---------~~~viv~  130 (332)
                        ..+.+  .+.|++|..||+....    ..+.+   ..+..|+    ..++.+.+.+++...+         .+.++++
T Consensus        71 ~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~  150 (250)
T d1yo6a1          71 SKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITI  150 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEE
T ss_pred             HHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccc
Confidence              11112  2379999999974321    23333   3455554    4556666666654311         2445555


Q ss_pred             cCcccchHHHHHHhCCCCCC--CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          131 ANPANTNALILKEFAPSIPA--KNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       131 tNP~~~~~~~~~~~~~~~~~--~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      +..........    ++.+.  ..-++.++.--..|-+.+|+.+.  +.+|+
T Consensus       151 s~~~~~~~~~~----~~~~~~~~~aY~aSKaal~~l~~~la~el~--~~gI~  196 (250)
T d1yo6a1         151 SSGLGSITDNT----SGSAQFPVLAYRMSKAAINMFGRTLAVDLK--DDNVL  196 (250)
T ss_dssp             CCGGGCSTTCC----STTSSSCBHHHHHHHHHHHHHHHHHHHHTG--GGTCE
T ss_pred             ccccccccCCc----ccccchhHHHHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence            54332211100    11111  11245555555677777888764  45666

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.65  E-value=0.0045  Score=52.53  Aligned_cols=157  Identities=15%  Similarity=0.088  Sum_probs=83.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEee-------CCh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVAT-------TDA   75 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~-------~~~   75 (332)
                      +.+.|+||++.+|.+++..|+..|.       +|++.+... ++.++....++.+.....   ..+++..       ...
T Consensus         7 K~alITGas~GIG~aia~~la~~G~-------~Vvi~~~~~-~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~   78 (259)
T d1ja9a_           7 KVALTTGAGRGIGRGIAIELGRRGA-------SVVVNYGSS-SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKA   78 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC-------EEEEEcCCC-hHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHH
Confidence            6789999999999999999999874       677755443 344443344443321100   0000000       012


Q ss_pred             hhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCC
Q 020022           76 VEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIP  149 (332)
Q Consensus        76 ~~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~  149 (332)
                      .+.+-.-|++|..||......   .+   .+..+..|+...-.+.+....+..+...+++++.....        ..+.|
T Consensus        79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~--------~~~~~  150 (259)
T d1ja9a_          79 VSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAV--------MTGIP  150 (259)
T ss_dssp             HHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGT--------CCSCC
T ss_pred             HHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccc--------ccCCC
Confidence            233457899999999753221   22   23445556543333333333332233445555433221        02333


Q ss_pred             CCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          150 AKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      ..-.++.++---..+-+.+|+.++  +..|+
T Consensus       151 ~~~~Y~asK~al~~l~r~lA~e~~--~~gIr  179 (259)
T d1ja9a_         151 NHALYAGSKAAVEGFCRAFAVDCG--AKGVT  179 (259)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence            222455556555677888888877  44555

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.58  E-value=0.0016  Score=46.46  Aligned_cols=73  Identities=16%  Similarity=0.150  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.+||+|+| .|..|.+++..|...+.       ++.++|.+.+.+..    .++.+.     ..+.........+.++|
T Consensus         4 ~~K~v~ViG-lG~sG~s~a~~L~~~g~-------~v~~~D~~~~~~~~----~~~~~~-----~~~~~~~~~~~~~~~~d   66 (93)
T d2jfga1           4 QGKNVVIIG-LGLTGLSCVDFFLARGV-------TPRVMDTRMTPPGL----DKLPEA-----VERHTGSLNDEWLMAAD   66 (93)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHHTTC-------CCEEEESSSSCTTG----GGSCTT-----SCEEESBCCHHHHHHCS
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHCCC-------EEEEeeCCcCchhH----HHHhhc-----cceeecccchhhhccCC
Confidence            356899999 69999999999998874       68999987532211    112111     12222223355678999


Q ss_pred             EEEEeCCCCC
Q 020022           84 IAVMVGGFPR   93 (332)
Q Consensus        84 iVi~~ag~~~   93 (332)
                      +||++-|++.
T Consensus        67 ~vi~SPGi~~   76 (93)
T d2jfga1          67 LIVASPGIAL   76 (93)
T ss_dssp             EEEECTTSCT
T ss_pred             EEEECCCCCC
Confidence            9999988874

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.56  E-value=0.0026  Score=50.34  Aligned_cols=75  Identities=15%  Similarity=0.119  Sum_probs=47.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ..+||+|+||+|.||+.++..+.+.+-+      + +..+|+... ..   ...|+..........+..+.+..+.++.+
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~------~lv~~~~~~~~-~~---~g~d~~~~~~~~~~~~~~~~~~~~~~~~~   72 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGV------QLGAALEREGS-SL---LGSDAGELAGAGKTGVTVQSSLDAVKDDF   72 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTE------ECCCEECCTTC-TT---CSCCTTCSSSSSCCSCCEESCSTTTTTSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEecccc-hh---ccchhhhhhccccCCceeeccHHHHhccc
Confidence            4579999999999999999988875311      3 345565431 11   12233332221223455667778888999


Q ss_pred             cEEEEe
Q 020022           83 NIAVMV   88 (332)
Q Consensus        83 DiVi~~   88 (332)
                      |+||=.
T Consensus        73 DViIDF   78 (162)
T d1diha1          73 DVFIDF   78 (162)
T ss_dssp             SEEEEC
T ss_pred             ceEEEe
Confidence            988654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.53  E-value=0.017  Score=48.96  Aligned_cols=80  Identities=13%  Similarity=0.099  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc---cceEe-------
Q 020022            4 EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL---KGVVA-------   71 (332)
Q Consensus         4 ~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~---~~~~~-------   71 (332)
                      +.+++.|+||+|  .+|.++|..|+..|.       +|++.|+++.   +.....++........   ..+..       
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-------~V~i~~r~~~---~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~   73 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-------TLAFTYLNES---LEKRVRPIAQELNSPYVYELDVSKEEHFKSL   73 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-------EEEEEESSTT---THHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-------EEEEEeCCHH---HHHHHHHHHhhCCceeEeeecccchhhHHHH
Confidence            456899999877  599999999999875       8999999842   2223333333221110   00000       


Q ss_pred             eCChhhhcCCCcEEEEeCCCCC
Q 020022           72 TTDAVEACTGVNIAVMVGGFPR   93 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~   93 (332)
                      .....+.+...|++|+.+|...
T Consensus        74 ~~~~~~~~g~id~lV~nag~~~   95 (274)
T d2pd4a1          74 YNSVKKDLGSLDFIVHSVAFAP   95 (274)
T ss_dssp             HHHHHHHTSCEEEEEECCCCCC
T ss_pred             HHHHHHHcCCCCeEEeeccccc
Confidence            0112344567899999998754

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.51  E-value=0.002  Score=49.95  Aligned_cols=72  Identities=24%  Similarity=0.313  Sum_probs=44.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      +|||+|+||+|.+|.-+...|.+.+.  +.  .++.++--..    -.|.....      ............+.+.++|+
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~h--P~--~~l~~~~s~~----~~Gk~i~~------~~~~~~~~~~~~~~~~~~d~   67 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDF--PL--HRLHLLASAE----SAGQRMGF------AESSLRVGDVDSFDFSSVGL   67 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTC--CC--SCEEEEECTT----TTTCEEEE------TTEEEECEEGGGCCGGGCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCC--Cc--eEEEEEeecc----cCCcceee------ccccchhccchhhhhccceE
Confidence            58999999999999999998875321  11  2677775432    12222111      11233333334466789999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      ++++++
T Consensus        68 vf~a~p   73 (144)
T d2hjsa1          68 AFFAAA   73 (144)
T ss_dssp             EEECSC
T ss_pred             EEecCC
Confidence            998853

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0079  Score=51.35  Aligned_cols=117  Identities=17%  Similarity=0.100  Sum_probs=70.7

Q ss_pred             cEEE-EEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---------
Q 020022            6 VRVL-VTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---------   73 (332)
Q Consensus         6 ~kI~-IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---------   73 (332)
                      ++|+ ||||++.+|..++..|+.. +.       .|.+.++++  ++++..+.+|...... ..-+... +         
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~Dvs~~~sv~~~~   72 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSG-------DVVLTARDV--TRGQAAVQQLQAEGLS-PRFHQLDIDDLQSIRALR   72 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSS-------EEEEEESSH--HHHHHHHHHHHHTTCC-CEEEECCTTCHHHHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHHHHhcCCc-EEEEEEecCCHHHHHHHH
Confidence            5784 8899999999999999874 42       799999984  5665555555432211 0000000 1         


Q ss_pred             -ChhhhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           74 -DAVEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        74 -~~~~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                       ...+.+..-|++|..||+.....   .+.   +..+..|.--...+.+.+-..-.+.+++|+++.
T Consensus        73 ~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          73 DFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             HHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence             12233457899999999854221   222   234566766665666655554434577888875

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.49  E-value=0.0012  Score=53.05  Aligned_cols=75  Identities=16%  Similarity=0.151  Sum_probs=42.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |+||+|+||+|.+|.-+...|.....      ++|..+=-+    ...|...+-.+-.......+ ...+..+..+++|+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~------~ei~~l~s~----~~aG~~i~~~~p~~~~~~~~-~~~~~~~~~~~~dv   69 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPE------AKITYLSSR----TYAGKKLEEIFPSTLENSIL-SEFDPEKVSKNCDV   69 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTT------EEEEEEECS----TTTTSBHHHHCGGGCCCCBC-BCCCHHHHHHHCSE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCC------ceEEEeecc----ccCCCcccccCchhhccccc-cccCHhHhccccce
Confidence            46999999999999999998886542      255555222    12232221111111111111 12344455568999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |+.+.+
T Consensus        70 vf~a~p   75 (176)
T d1vkna1          70 LFTALP   75 (176)
T ss_dssp             EEECCS
T ss_pred             EEEccc
Confidence            998753

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.44  E-value=0.004  Score=47.04  Aligned_cols=33  Identities=24%  Similarity=0.279  Sum_probs=28.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +|+.|+| .|.+|+.++..|...|.       +++++|.++
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~-------~vvvid~d~   33 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGH-------EVLAVDINE   33 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTC-------CCEEEESCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEecCcH
Confidence            4789999 69999999999998764       789999884

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.41  E-value=0.005  Score=49.77  Aligned_cols=94  Identities=19%  Similarity=0.184  Sum_probs=59.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|..++..|..-++       ++..+|.....   .....+.         .+....++.+.+++||+
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg~-------~v~~~d~~~~~---~~~~~~~---------~~~~~~~l~~~l~~sD~  103 (188)
T d2naca1          44 AMHVGTVA-AGRIGLAVLRRLAPFDV-------HLHYTDRHRLP---ESVEKEL---------NLTWHATREDMYPVCDV  103 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHGGGTC-------EEEEECSSCCC---HHHHHHH---------TCEECSSHHHHGGGCSE
T ss_pred             ccceeecc-ccccchhhhhhhhccCc-------eEEEEeecccc---ccccccc---------cccccCCHHHHHHhccc
Confidence            47999999 79999999999876553       79999976311   1111111         12233578899999999


Q ss_pred             EEEeCCCCCC-CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           85 AVMVGGFPRK-EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        85 Vi~~ag~~~~-~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      |++..-...+ .+.       -|.       +.+... ++++++|+++--
T Consensus       104 v~~~~plt~~T~~l-------i~~-------~~l~~m-k~ga~lIN~aRG  138 (188)
T d2naca1         104 VTLNCPLHPETEHM-------IND-------ETLKLF-KRGAYIVNTARG  138 (188)
T ss_dssp             EEECSCCCTTTTTC-------BSH-------HHHTTS-CTTEEEEECSCG
T ss_pred             hhhcccccccchhh-------hHH-------HHHHhC-CCCCEEEecCch
Confidence            9997644321 111       111       123333 578889888753

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.39  E-value=0.014  Score=49.23  Aligned_cols=149  Identities=10%  Similarity=0.069  Sum_probs=84.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC-------hhhhc
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD-------AVEAC   79 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~-------~~~al   79 (332)
                      ...|+||++.+|..+|..|++.|.       .|.+.|++.  +.++.. ..+......  ..+....+       ..+.+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-------~V~i~~r~~--~~~~~~-~~~~~~~~~--~dv~~~~~~~~~~~~~~~~~   69 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-------TVACHDESF--KQKDEL-EAFAETYPQ--LKPMSEQEPAELIEAVTSAY   69 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-------EEEECCGGG--GSHHHH-HHHHHHCTT--SEECCCCSHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHH-HhhhCcEEE--eccCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999874       799999874  233211 111111111  11111112       22344


Q ss_pred             CCCcEEEEeCCCCCCCC----CCHHH---HHHhh----HHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCC
Q 020022           80 TGVNIAVMVGGFPRKEG----MERKD---VMSKN----VSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI  148 (332)
Q Consensus        80 ~~aDiVi~~ag~~~~~~----~~r~~---~~~~n----~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~  148 (332)
                      -.-|++|..||.....+    .+.++   .+..|    ...++.+.+.+++..  .+.||++|.-...         .+.
T Consensus        70 G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~--~G~IV~isS~~~~---------~~~  138 (252)
T d1zmta1          70 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK--SGHIIFITSATPF---------GPW  138 (252)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECCSTTT---------SCC
T ss_pred             CCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc--cceeecccccccc---------ccc
Confidence            57899999888643221    33333   33444    356777888887764  3567777643321         112


Q ss_pred             CCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      |..-.++.++---..|-+.+|+.++  +..|+
T Consensus       139 ~~~~~Y~asKaal~~lt~~lA~ela--~~gIr  168 (252)
T d1zmta1         139 KELSTYTSARAGACTLANALSKELG--EYNIP  168 (252)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTCC
T ss_pred             ccccccccccccHHHHHHHHHHHhc--ccCcE
Confidence            2111344455455667777787775  34454

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.37  E-value=0.0034  Score=51.06  Aligned_cols=92  Identities=12%  Similarity=0.064  Sum_probs=58.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|+.++..+..-|+       ++..||.....+    ....  .       .+....++.+.++.||+
T Consensus        49 gktvgIiG-~G~IG~~va~~l~~fg~-------~v~~~d~~~~~~----~~~~--~-------~~~~~~~l~~ll~~sD~  107 (193)
T d1mx3a1          49 GETLGIIG-LGRVGQAVALRAKAFGF-------NVLFYDPYLSDG----VERA--L-------GLQRVSTLQDLLFHSDC  107 (193)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTC-------EEEEECTTSCTT----HHHH--H-------TCEECSSHHHHHHHCSE
T ss_pred             CceEEEec-cccccccceeeeecccc-------ceeeccCccccc----chhh--h-------ccccccchhhccccCCE
Confidence            36999999 79999999999986553       899999763211    1111  1       11233568888999999


Q ss_pred             EEEeCCCCCC-CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRK-EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~-~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |++......+ .+.       -|.+       .+.. .+|++++|+++-
T Consensus       108 i~~~~plt~~T~~l-------i~~~-------~l~~-mk~~a~lIN~sR  141 (193)
T d1mx3a1         108 VTLHCGLNEHNHHL-------INDF-------TVKQ-MRQGAFLVNTAR  141 (193)
T ss_dssp             EEECCCCCTTCTTS-------BSHH-------HHTT-SCTTEEEEECSC
T ss_pred             EEEeecccccchhh-------hhHH-------HHhc-cCCCCeEEecCC
Confidence            9998643321 111       1211       2333 357898888874

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.36  E-value=0.0028  Score=53.77  Aligned_cols=36  Identities=17%  Similarity=0.268  Sum_probs=30.1

Q ss_pred             CCcEEEEEcCCCc--hHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQ--IGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~--vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +.+++.|+||+|.  +|.++|..|+..|.       +|.|.+++.
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga-------~Vil~~~~~   42 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGA-------QLVLTGFDR   42 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTC-------EEEEEECSC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCC-------EEEEEeCCh
Confidence            4568999997664  99999999999874       799999874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.25  E-value=0.027  Score=41.09  Aligned_cols=69  Identities=9%  Similarity=0.082  Sum_probs=44.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .+||.|+| +|.+|..-+..|+..|.       .+.+++....++ +    ..+.+..   .-.+....-..+.+.++++
T Consensus        12 ~k~vlVvG-~G~va~~ka~~ll~~ga-------~v~v~~~~~~~~-~----~~~~~~~---~i~~~~~~~~~~dl~~~~l   75 (113)
T d1pjqa1          12 DRDCLIVG-GGDVAERKARLLLEAGA-------RLTVNALTFIPQ-F----TVWANEG---MLTLVEGPFDETLLDSCWL   75 (113)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTB-------EEEEEESSCCHH-H----HHHHTTT---SCEEEESSCCGGGGTTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEeccCChH-H----HHHHhcC---CceeeccCCCHHHhCCCcE
Confidence            47999999 69999999999998764       788998764221 1    1121111   0111122234567899999


Q ss_pred             EEEeC
Q 020022           85 AVMVG   89 (332)
Q Consensus        85 Vi~~a   89 (332)
                      |+.+.
T Consensus        76 v~~at   80 (113)
T d1pjqa1          76 AIAAT   80 (113)
T ss_dssp             EEECC
T ss_pred             EeecC
Confidence            98874

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.013  Score=49.10  Aligned_cols=156  Identities=15%  Similarity=0.090  Sum_probs=84.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-------eCChhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-------TTDAVE   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-------~~~~~~   77 (332)
                      .+.+.|+||++.+|.+++..|+..|.       .|.+.|+++  +.++....++..........+..       ......
T Consensus         5 GKvalITGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (248)
T d2o23a1           5 GLVAVITGGASGLGLATAERLVGQGA-------SAVLLDLPN--SGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKG   75 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-------EEEEEECTT--SSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHhCCCccccccccccccccccccccccc
Confidence            45678999999999999999999875       799999985  44554444443221100000000       001123


Q ss_pred             hcCCCcEEEEeCCCCCCCC---------CC---HHHHHHhhHHH----HHHHHHHHHhhc----CCCeEEEEecCcccch
Q 020022           78 ACTGVNIAVMVGGFPRKEG---------ME---RKDVMSKNVSI----YKAQASALEQHA----APNCKVLVVANPANTN  137 (332)
Q Consensus        78 al~~aDiVi~~ag~~~~~~---------~~---r~~~~~~n~~i----~~~i~~~i~~~~----~~~~~viv~tNP~~~~  137 (332)
                      .....|+.+..++.....+         .+   .+..+..|+..    .+.+.+.+....    .+.+.||++|....  
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~--  153 (248)
T d2o23a1          76 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA--  153 (248)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH--
T ss_pred             ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhh--
Confidence            3456788888766532111         12   22344556543    444444443321    13456777775432  


Q ss_pred             HHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          138 ALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       138 ~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                           ..  +.|..-.++.+.---..|-+.+|..++  +..|+
T Consensus       154 -----~~--~~~~~~~Y~asKaal~~lt~~la~e~~--~~gIr  187 (248)
T d2o23a1         154 -----FE--GQVGQAAYSASKGGIVGMTLPIARDLA--PIGIR  187 (248)
T ss_dssp             -----HH--CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             -----cc--CCCCchHHHHHHHHHHHHHHHHHHHhc--ccCcc
Confidence                 11  122222345555555677778888776  45666

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.017  Score=45.49  Aligned_cols=71  Identities=8%  Similarity=0.064  Sum_probs=46.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.++|.|+| +|..+.++++.|...+.       +|.+++++.  ++.+..+..+.+.     ..+............+|
T Consensus        17 ~~k~vlIlG-aGGaarai~~al~~~g~-------~i~I~nRt~--~ka~~l~~~~~~~-----~~~~~~~~~~~~~~~~d   81 (170)
T d1nyta1          17 PGLRILLIG-AGGASRGVLLPLLSLDC-------AVTITNRTV--SRAEELAKLFAHT-----GSIQALSMDELEGHEFD   81 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSH--HHHHHHHHHTGGG-----SSEEECCSGGGTTCCCS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHhcccce-------EEEeccchH--HHHHHHHHHHhhc-----ccccccccccccccccc
Confidence            347999999 69999999999988763       799999873  4444333322221     12333332333456899


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +||.+-
T Consensus        82 liIN~T   87 (170)
T d1nyta1          82 LIINAT   87 (170)
T ss_dssp             EEEECC
T ss_pred             eeeccc
Confidence            999874

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.98  E-value=0.0081  Score=47.52  Aligned_cols=65  Identities=17%  Similarity=0.258  Sum_probs=42.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      +++||+|+| .|++|+..+..+....-      +| +.++|+++  +...             ...+....+..+.+.+.
T Consensus         2 ~kirvgiiG-~G~ig~~~~~~l~~~~~------~elvav~~~~~--~~~~-------------~~~~~~~~~~~~~~~~~   59 (170)
T d1f06a1           2 TNIRVAIVG-YGNLGRSVEKLIAKQPD------MDLVGIFSRRA--TLDT-------------KTPVFDVADVDKHADDV   59 (170)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHTTCSS------EEEEEEEESSS--CCSS-------------SSCEEEGGGGGGTTTTC
T ss_pred             CcceEEEEC-ChHHHHHHHHHHHhCCC------cEEEEEEeccc--cccc-------------ccccccchhhhhhcccc
Confidence            568999999 79999998888876421      23 45677663  2111             01222334556667899


Q ss_pred             cEEEEeCC
Q 020022           83 NIAVMVGG   90 (332)
Q Consensus        83 DiVi~~ag   90 (332)
                      |+|+++..
T Consensus        60 D~Vvi~tp   67 (170)
T d1f06a1          60 DVLFLCMG   67 (170)
T ss_dssp             SEEEECSC
T ss_pred             ceEEEeCC
Confidence            99998753

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.94  E-value=0.0092  Score=48.12  Aligned_cols=89  Identities=11%  Similarity=0.083  Sum_probs=58.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|..++..+..-++       ++..+|......  .      .+        .....++.+.++.||+
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg~-------~v~~~d~~~~~~--~------~~--------~~~~~~l~ell~~sDi   99 (188)
T d1sc6a1          44 GKKLGIIG-YGHIGTQLGILAESLGM-------YVYFYDIENKLP--L------GN--------ATQVQHLSDLLNMSDV   99 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSCCCC--C------TT--------CEECSCHHHHHHHCSE
T ss_pred             ceEEEEee-cccchhhhhhhcccccc-------eEeeccccccch--h------hh--------hhhhhhHHHHHhhccc
Confidence            47999999 79999999998876553       899999763110  0      00        0122467888999999


Q ss_pred             EEEeCCCCCC-CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRK-EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~-~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |++......+ .+.       -|.       +.+... ++++++|+++-
T Consensus       100 i~i~~plt~~T~~l-------i~~-------~~l~~m-k~~a~lIN~aR  133 (188)
T d1sc6a1         100 VSLHVPENPSTKNM-------MGA-------KEISLM-KPGSLLINASR  133 (188)
T ss_dssp             EEECCCSSTTTTTC-------BCH-------HHHHHS-CTTEEEEECSC
T ss_pred             eeecccCCcchhhh-------ccH-------HHHhhC-CCCCEEEEcCc
Confidence            9998654421 111       111       123333 47899998874

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.94  E-value=0.011  Score=47.82  Aligned_cols=93  Identities=14%  Similarity=0.011  Sum_probs=58.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|+.++..+..-|+       ++..+|.....  .  . .+....       .....++.+.++.||+
T Consensus        47 g~tvgIiG-~G~IG~~va~~l~~fg~-------~v~~~d~~~~~--~--~-~~~~~~-------~~~~~~l~~ll~~sD~  106 (191)
T d1gdha1          47 NKTLGIYG-FGSIGQALAKRAQGFDM-------DIDYFDTHRAS--S--S-DEASYQ-------ATFHDSLDSLLSVSQF  106 (191)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTC-------EEEEECSSCCC--H--H-HHHHHT-------CEECSSHHHHHHHCSE
T ss_pred             ccceEEee-cccchHHHHHHHHhhcc-------ccccccccccc--c--c-hhhccc-------ccccCCHHHHHhhCCe
Confidence            47999999 79999999988876553       78999976311  1  1 111111       1123467889999999


Q ss_pred             EEEeCCCCC-CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPR-KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~-~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |++..-... ..+.       -|.       +.+.. .+|++++|+++-
T Consensus       107 v~l~~plt~~T~~l-------i~~-------~~l~~-mk~~a~lIN~sR  140 (191)
T d1gdha1         107 FSLNAPSTPETRYF-------FNK-------ATIKS-LPQGAIVVNTAR  140 (191)
T ss_dssp             EEECCCCCTTTTTC-------BSH-------HHHTT-SCTTEEEEECSC
T ss_pred             EEecCCCCchHhhe-------ecH-------HHhhC-cCCccEEEecCC
Confidence            998754332 1121       121       12233 457899988874

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.078  Score=45.17  Aligned_cols=155  Identities=15%  Similarity=0.169  Sum_probs=78.2

Q ss_pred             cEEE-EEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeCC---h---h-
Q 020022            6 VRVL-VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATTD---A---V-   76 (332)
Q Consensus         6 ~kI~-IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~~---~---~-   76 (332)
                      +||+ ||||++.+|.+++..|+..|.-.    +.+.+...+.  +............... ..++. +..|   .   . 
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v----~~v~~~~~~~--~~~~~l~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~   74 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQS----FKVYATLRDL--KTQGRLWEAARALACP-PGSLETLQLDVRDSKSVAA   74 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCC----EEEEEEESCG--GGTHHHHHHHHHTTCC-TTSEEEEECCTTCHHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCe----EEEEEecCCh--hhhHHHHHHHHHHhcc-CCceEEEeccccchHhhhh
Confidence            5776 56999999999999999876411    1222223221  1111111111111111 11111 1111   1   0 


Q ss_pred             ---hhc-CCCcEEEEeCCCCCCCC---CCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022           77 ---EAC-TGVNIAVMVGGFPRKEG---MER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILK  142 (332)
Q Consensus        77 ---~al-~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~  142 (332)
                         ++. ...|++|..+|......   .+.   +..+..|+    ..++.+.+.+.+..  .+.||++|.-...      
T Consensus        75 ~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~--~G~Iv~isS~~g~------  146 (285)
T d1jtva_          75 ARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG--SGRVLVTGSVGGL------  146 (285)
T ss_dssp             HHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEEGGGT------
T ss_pred             hhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC--CCceEEEechhhc------
Confidence               111 35799999998754322   222   23445554    56777888888764  3667777643321      


Q ss_pred             HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                         .+.|..-.++.++---..|-+.++..+.  +.+|+
T Consensus       147 ---~~~~~~~~Y~asKaal~~l~~~la~El~--~~gIr  179 (285)
T d1jtva_         147 ---MGLPFNDVYCASKFALEGLCESLAVLLL--PFGVH  179 (285)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEE
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHHhh--ccCcE
Confidence               1222222344444444566667777664  45666

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=95.88  E-value=0.014  Score=51.46  Aligned_cols=75  Identities=16%  Similarity=0.139  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ....++||| +|..+..-+..+....-+.     +|+++|+++  +..+..+.++.+   ....++....+.++|+++||
T Consensus       127 da~~l~iiG-~G~QA~~~~~a~~~v~~i~-----~V~v~~r~~--~~~~~~~~~l~~---~~g~~v~~~~s~~eav~~AD  195 (340)
T d1x7da_         127 NARKMALIG-NGAQSEFQALAFHKHLGIE-----EIVAYDTDP--LATAKLIANLKE---YSGLTIRRASSVAEAVKGVD  195 (340)
T ss_dssp             TCCEEEEEC-CSTTHHHHHHHHHHHSCCC-----EEEEECSSH--HHHHHHHHHHTT---CTTCEEEECSSHHHHHTTCS
T ss_pred             CCceEEEEc-ccHHHHHHHHHHhhhccee-----eeEEEecCh--HHHHHHHHhhhh---ccCCCceecCCHHHHHhcCC
Confidence            357999999 7998887666655421122     899999984  444434444432   12345667788999999999


Q ss_pred             EEEEeC
Q 020022           84 IAVMVG   89 (332)
Q Consensus        84 iVi~~a   89 (332)
                      +|+.+-
T Consensus       196 Ii~t~T  201 (340)
T d1x7da_         196 IITTVT  201 (340)
T ss_dssp             EEEECC
T ss_pred             ceeecc
Confidence            998753

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.84  E-value=0.042  Score=41.21  Aligned_cols=24  Identities=13%  Similarity=0.325  Sum_probs=20.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGV   29 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~   29 (332)
                      |||+|.|++|.||+.++..+...+
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~   24 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKG   24 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCC
Confidence            599999999999999987776654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.82  E-value=0.013  Score=46.60  Aligned_cols=76  Identities=14%  Similarity=0.125  Sum_probs=50.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~aD   83 (332)
                      .++|.|+| +|.++.++++.|...   +     +|.+++++.  ++++..+.++....... ...+.. .+....+.++|
T Consensus        18 ~k~vlIlG-aGG~arai~~aL~~~---~-----~i~I~nR~~--~ka~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d   85 (177)
T d1nvta1          18 DKNIVIYG-AGGAARAVAFELAKD---N-----NIIIANRTV--EKAEALAKEIAEKLNKKFGEEVKF-SGLDVDLDGVD   85 (177)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHTSS---S-----EEEEECSSH--HHHHHHHHHHHHHHTCCHHHHEEE-ECTTCCCTTCC
T ss_pred             CCEEEEEC-CcHHHHHHHHHHccc---c-----ceeeehhhh--hHHHHHHHHHHHhhchhhhhhhhh-hhhhhccchhh
Confidence            46899999 699999998888543   2     799999974  55655555565432211 112222 34556678899


Q ss_pred             EEEEeCCCC
Q 020022           84 IAVMVGGFP   92 (332)
Q Consensus        84 iVi~~ag~~   92 (332)
                      +||.+-...
T Consensus        86 liIn~tp~g   94 (177)
T d1nvta1          86 IIINATPIG   94 (177)
T ss_dssp             EEEECSCTT
T ss_pred             hhccCCccc
Confidence            999975443

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.78  E-value=0.051  Score=38.51  Aligned_cols=72  Identities=17%  Similarity=0.230  Sum_probs=49.2

Q ss_pred             CCcEEEEEcCCCchH-HHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIG-YALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG-~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ..+||-+|| .|.+| +++|..|...|.       +|...|...++     ....|.+..    -.+.. ....+.++++
T Consensus         7 ~~~~ihfiG-igG~GMs~LA~~L~~~G~-------~VsGSD~~~~~-----~~~~L~~~G----i~v~~-g~~~~~i~~~   68 (96)
T d1p3da1           7 RVQQIHFIG-IGGAGMSGIAEILLNEGY-------QISGSDIADGV-----VTQRLAQAG----AKIYI-GHAEEHIEGA   68 (96)
T ss_dssp             TCCEEEEET-TTSTTHHHHHHHHHHHTC-------EEEEEESCCSH-----HHHHHHHTT----CEEEE-SCCGGGGTTC
T ss_pred             hCCEEEEEE-ECHHHHHHHHHHHHhCCC-------EEEEEeCCCCh-----hhhHHHHCC----CeEEE-CCccccCCCC
Confidence            457999999 68888 568999998875       89999987531     222333321    12222 2334568999


Q ss_pred             cEEEEeCCCCC
Q 020022           83 NIAVMVGGFPR   93 (332)
Q Consensus        83 DiVi~~ag~~~   93 (332)
                      |+||.+.+++.
T Consensus        69 d~vV~S~AI~~   79 (96)
T d1p3da1          69 SVVVVSSAIKD   79 (96)
T ss_dssp             SEEEECTTSCT
T ss_pred             CEEEECCCcCC
Confidence            99999988873

>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.77  E-value=0.017  Score=46.39  Aligned_cols=78  Identities=17%  Similarity=0.034  Sum_probs=48.5

Q ss_pred             CcEEEEEc-CCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            5 PVRVLVTG-AAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         5 ~~kI~IiG-a~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      ..||+++| +..+|..+++..+..-|+       +++++-..+- ..-.....++..........++.+.+..+|++++|
T Consensus         5 ~lkia~vGD~~nnV~~Sli~~~~~~G~-------~l~l~~P~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aD   76 (185)
T d1dxha2           5 DISYAYLGDARNNMGNSLLLIGAKLGM-------DVRIAAPKAL-WPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVD   76 (185)
T ss_dssp             GCEEEEESCCSSHHHHHHHHHHHHTTC-------EEEEECCGGG-SCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCS
T ss_pred             CCEEEEEcCCcchHHHHHHHHHHHcCC-------EEEEEccHHH-HhhhHHHHHHHHHhhccCCeEEEEeChhhcccccc
Confidence            46999999 324788888877776553       7888865321 00011112222211112346778889999999999


Q ss_pred             EEEEeCC
Q 020022           84 IAVMVGG   90 (332)
Q Consensus        84 iVi~~ag   90 (332)
                      +|....-
T Consensus        77 vVyt~~w   83 (185)
T d1dxha2          77 FVHTDVW   83 (185)
T ss_dssp             EEEECCC
T ss_pred             EEEeehh
Confidence            9887643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.74  E-value=0.095  Score=43.78  Aligned_cols=47  Identities=32%  Similarity=0.374  Sum_probs=32.7

Q ss_pred             EEE-EEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh
Q 020022            7 RVL-VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV   59 (332)
Q Consensus         7 kI~-IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~   59 (332)
                      ||+ |+||++.+|.+++..|+...--+    ..|++.|+++  ++++....++.
T Consensus         7 KvalITGas~GIG~aiA~~lA~~~~~G----~~Vv~~~r~~--~~l~~~~~~l~   54 (259)
T d1oaaa_           7 AVCVLTGASRGFGRALAPQLARLLSPG----SVMLVSARSE--SMLRQLKEELG   54 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTT----CEEEEEESCH--HHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHhcccCC----CEEEEEECCH--HHHHHHHHHHH
Confidence            555 55999999999999998521111    1799999874  56665555554

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.73  E-value=0.0081  Score=44.52  Aligned_cols=35  Identities=20%  Similarity=0.239  Sum_probs=30.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .++||+|+| +|++|.-+|..|...|.       +++|+++.+
T Consensus        21 ~p~~v~IiG-gG~iG~E~A~~l~~~g~-------~Vtlv~~~~   55 (117)
T d1onfa2          21 ESKKIGIVG-SGYIAVELINVIKRLGI-------DSYIFARGN   55 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHTTTC-------EEEEECSSS
T ss_pred             CCCEEEEEC-CchHHHHHHHHHHhccc-------cceeeehhc
Confidence            378999999 69999999999987663       899999864

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.63  E-value=0.015  Score=46.02  Aligned_cols=73  Identities=8%  Similarity=0.042  Sum_probs=48.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      +.++|.|+| +|.++.++++.|...+  .     +|+++.++.  ++++..+..+....     ++.........+.++|
T Consensus        17 ~~k~vlIlG-aGGaarai~~aL~~~~--~-----~i~I~nR~~--~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~~d   81 (171)
T d1p77a1          17 PNQHVLILG-AGGATKGVLLPLLQAQ--Q-----NIVLANRTF--SKTKELAERFQPYG-----NIQAVSMDSIPLQTYD   81 (171)
T ss_dssp             TTCEEEEEC-CSHHHHTTHHHHHHTT--C-----EEEEEESSH--HHHHHHHHHHGGGS-----CEEEEEGGGCCCSCCS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHcccC--c-----eeeeccchH--HHHHHHHHHHhhcc-----ccchhhhccccccccc
Confidence            346999999 6999999999988643  2     799999984  55554544443221     2222222334578999


Q ss_pred             EEEEeCCC
Q 020022           84 IAVMVGGF   91 (332)
Q Consensus        84 iVi~~ag~   91 (332)
                      +||.+...
T Consensus        82 iiIN~tp~   89 (171)
T d1p77a1          82 LVINATSA   89 (171)
T ss_dssp             EEEECCCC
T ss_pred             eeeecccc
Confidence            99998543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.62  E-value=0.027  Score=41.72  Aligned_cols=35  Identities=23%  Similarity=0.470  Sum_probs=30.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +.++|+||| +|++|.-+|..|...+.       +++|++..+
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~-------~Vtli~~~~   63 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGV-------HVSLVETQP   63 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESSS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccc-------eEEEEeecc
Confidence            357999999 69999999999998764       899999874

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.60  E-value=0.11  Score=43.14  Aligned_cols=78  Identities=14%  Similarity=0.045  Sum_probs=48.3

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE----eeCC---------
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV----ATTD---------   74 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~----~~~~---------   74 (332)
                      ..||||++.+|.+++..|++.|.       +|++.|++. ++..+....++..........+.    ....         
T Consensus         4 AlVTGas~GIG~aia~~la~~G~-------~Vvi~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (266)
T d1mxha_           4 AVITGGARRIGHSIAVRLHQQGF-------RVVVHYRHS-EGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII   75 (266)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCc-hHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHH
Confidence            57999999999999999999885       899999885 23333334444332211000000    0001         


Q ss_pred             --hhhhcCCCcEEEEeCCCCC
Q 020022           75 --AVEACTGVNIAVMVGGFPR   93 (332)
Q Consensus        75 --~~~al~~aDiVi~~ag~~~   93 (332)
                        ..+.+...|++|..||...
T Consensus        76 ~~~~~~~g~iDilvnnAG~~~   96 (266)
T d1mxha_          76 DCSFRAFGRCDVLVNNASAYY   96 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHhCCCCEEEECCccCC
Confidence              1223456899999999754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.57  E-value=0.014  Score=45.79  Aligned_cols=100  Identities=22%  Similarity=0.237  Sum_probs=64.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      -++|+|+| .|.+|..+|..+...|.       .+..+|+++. ..+++. +   +..       .. ....+++..+|+
T Consensus        24 Gk~v~V~G-yG~iG~g~A~~~rg~G~-------~V~v~e~dp~-~al~A~-~---dG~-------~v-~~~~~a~~~adi   82 (163)
T d1li4a1          24 GKVAVVAG-YGDVGKGCAQALRGFGA-------RVIITEIDPI-NALQAA-M---EGY-------EV-TTMDEACQEGNI   82 (163)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCHH-HHHHHH-H---TTC-------EE-CCHHHHTTTCSE
T ss_pred             CCEEEEec-cccccHHHHHHHHhCCC-------eeEeeecccc-hhHHhh-c---Cce-------Ee-eehhhhhhhccE
Confidence            46899999 89999999999998774       7999999852 222211 1   111       12 357899999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC-cccchHHHHHH
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-PANTNALILKE  143 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN-P~~~~~~~~~~  143 (332)
                      ||.+-|...-  .+               .+.+++. ++++++.+++- ...+-...+.+
T Consensus        83 vvtaTGn~~v--I~---------------~eh~~~M-KdgaIL~N~Ghfd~EId~~~L~~  124 (163)
T d1li4a1          83 FVTTTGCIDI--IL---------------GRHFEQM-KDDAIVCNIGHFDVEIDVKWLNE  124 (163)
T ss_dssp             EEECSSCSCS--BC---------------HHHHTTC-CTTEEEEECSSSTTSBCHHHHHH
T ss_pred             EEecCCCccc--hh---------------HHHHHhc-cCCeEEEEeccccceecHHHHhh
Confidence            9998774421  11               1234444 46788887763 34443333333

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.56  E-value=0.012  Score=46.71  Aligned_cols=81  Identities=19%  Similarity=0.164  Sum_probs=44.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHh--hhhcCC-----ccceEeeCChh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELV--DAAFPL-----LKGVVATTDAV   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~--~~~~~~-----~~~~~~~~~~~   76 (332)
                      ++||+|.| .|.+|..++..+...+-      ++ +..-|..++.........+..  +.....     ...+....+..
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~d------ieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDD------MELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLN   74 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTT------EEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHH
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCC------ceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhh
Confidence            56999999 79999999888876431      24 445555432111111111000  000000     01223334566


Q ss_pred             hhcCCCcEEEEeCCCC
Q 020022           77 EACTGVNIAVMVGGFP   92 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~   92 (332)
                      ..+.++|+||-+-|..
T Consensus        75 ~~~~~vDvViEcTG~f   90 (172)
T d2czca2          75 DLLEKVDIIVDATPGG   90 (172)
T ss_dssp             HHHTTCSEEEECCSTT
T ss_pred             hhhccCCEEEECCCCC
Confidence            6778999999987644

>d1vjta2 d.162.1.2 (A:192-469) Putative alpha-glucosidase TM0752 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Putative alpha-glucosidase TM0752
species: Thermotoga maritima [TaxId: 2336]

Probab=95.51  E-value=0.028  Score=48.10  Aligned_cols=50  Identities=14%  Similarity=0.185  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEec
Q 020022          250 SACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQ  301 (332)
Q Consensus       250 ~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~  301 (332)
                      .++++|. +|.+| ++.++.++|..+|. -++|.|.++-+||++ ++|+.++-.
T Consensus       154 ~a~~ii~-ai~~~-~~~~~~vNv~N~G~I~nLp~davVEVpc~Vd~~Gi~P~~v  205 (278)
T d1vjta2         154 QHIPFIN-AIANN-KRVRLFLNVENQGTLKDFPDDVVMELPVWVDCCGIHREKV  205 (278)
T ss_dssp             SHHHHHH-HHHHC-CCEEEEEEEECTTSSTTSCSSSEEEEEEEEETTEEEECCC
T ss_pred             HHHHHHH-HHhCC-CCeEEEEECCCCCcCCCCCchhheEeEEEEeCCceeeeec
Confidence            3466554 47777 78899999999997 689999999999998 999999753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.48  E-value=0.016  Score=46.41  Aligned_cols=91  Identities=15%  Similarity=0.090  Sum_probs=57.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|+.++..+..-++       +|..+|....++    ...   +..      +. ..+..+.++.||+
T Consensus        44 ~k~vgiiG-~G~IG~~va~~~~~fg~-------~v~~~d~~~~~~----~~~---~~~------~~-~~~l~ell~~sDi  101 (184)
T d1ygya1          44 GKTVGVVG-LGRIGQLVAQRIAAFGA-------YVVAYDPYVSPA----RAA---QLG------IE-LLSLDDLLARADF  101 (184)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTC-------EEEEECTTSCHH----HHH---HHT------CE-ECCHHHHHHHCSE
T ss_pred             ceeeeecc-ccchhHHHHHHhhhccc-------eEEeecCCCChh----HHh---hcC------ce-eccHHHHHhhCCE
Confidence            47999999 79999999998876443       799999764211    111   111      11 2367889999999


Q ss_pred             EEEeCCCCC-CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPR-KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~-~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |++..-... ..+.       -|.       +.+.. .+|++++|+++-
T Consensus       102 v~~~~Plt~~T~~l-------in~-------~~l~~-mk~~a~lIN~sR  135 (184)
T d1ygya1         102 ISVHLPKTPETAGL-------IDK-------EALAK-TKPGVIIVNAAR  135 (184)
T ss_dssp             EEECCCCSTTTTTC-------BCH-------HHHTT-SCTTEEEEECSC
T ss_pred             EEEcCCCCchhhhh-------hhH-------HHHhh-hCCCceEEEecc
Confidence            999754332 1111       121       22233 357899999875

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.46  E-value=0.021  Score=49.88  Aligned_cols=71  Identities=15%  Similarity=0.200  Sum_probs=47.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN   83 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD   83 (332)
                      .+.+++|+| +|..+...+..+....-+.     +|+++++++  ++.+..+.++++..      +....+..+++++||
T Consensus       124 ~~~~l~iiG-aG~QA~~~~~al~~~~~i~-----~i~v~~r~~--e~~~~~~~~~~~~~------~~~~~~~~~a~~~aD  189 (320)
T d1omoa_         124 NSSVFGFIG-CGTQAYFQLEALRRVFDIG-----EVKAYDVRE--KAAKKFVSYCEDRG------ISASVQPAEEASRCD  189 (320)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHHSCCC-----EEEEECSSH--HHHHHHHHHHHHTT------CCEEECCHHHHTSSS
T ss_pred             CccEEEEec-CcccHHHHHHHHHHHhhhh-----hcccccCCH--HHHHHHHHHHHhcC------Cccccchhhhhcccc
Confidence            457899999 7999888777666532122     899999874  55555555554432      122334568899999


Q ss_pred             EEEEe
Q 020022           84 IAVMV   88 (332)
Q Consensus        84 iVi~~   88 (332)
                      +|+.+
T Consensus       190 iV~ta  194 (320)
T d1omoa_         190 VLVTT  194 (320)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            98765

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.43  E-value=0.009  Score=49.39  Aligned_cols=34  Identities=32%  Similarity=0.466  Sum_probs=29.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ..+||+||| +|.+|.+.|..|.+.|.       +|.|+|.+
T Consensus         5 ~~~kVvVIG-aGiaGl~~A~~L~~~G~-------~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLG-SGVIGLSSALILARKGY-------SVHILARD   38 (268)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHCCC-------CEEEEeCC
Confidence            457999999 69999999999999874       79999975

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.39  E-value=0.014  Score=45.31  Aligned_cols=70  Identities=21%  Similarity=0.319  Sum_probs=42.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEE
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV   86 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi   86 (332)
                      ||+|+||+|++|..+...|...+. .   ..++.++.-+.    ..|...  ...    ...............++|+++
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f-p---~~~l~~~~s~~----s~G~~~--~~~----~~~~~~~~~~~~~~~~~d~~f   68 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL-P---IDKIRYLASAR----SAGKSL--KFK----DQDITIEETTETAFEGVDIAL   68 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS-C---EEEEEEEECGG----GTTCEE--EET----TEEEEEEECCTTTTTTCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC-C---ceEEEEecccc----cccccc--ccc----CCcccccccchhhhhhhhhhh
Confidence            899999999999999988876531 1   12677775331    122211  111    112222333456678999999


Q ss_pred             EeCC
Q 020022           87 MVGG   90 (332)
Q Consensus        87 ~~ag   90 (332)
                      ++++
T Consensus        69 ~~~~   72 (154)
T d2gz1a1          69 FSAG   72 (154)
T ss_dssp             ECSC
T ss_pred             hccC
Confidence            9864

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.34  E-value=0.034  Score=44.28  Aligned_cols=35  Identities=29%  Similarity=0.414  Sum_probs=28.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +|-||.|+| +|.+|..-+......|-       .+..+|++.
T Consensus        28 ~pa~VvViG-aGvaG~~Aa~~A~~lGA-------~V~v~D~~~   62 (183)
T d1l7da1          28 PPARVLVFG-VGVAGLQAIATAKRLGA-------VVMATDVRA   62 (183)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCS
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHHcCC-------EEEEEeccH
Confidence            467999999 69999988877776553       799999985

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.34  E-value=0.015  Score=46.49  Aligned_cols=88  Identities=20%  Similarity=0.195  Sum_probs=57.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.+|..++..+..-|.       ++..+|+...+    +        ..      ....++.+.++.||+
T Consensus        42 gk~vgIiG-~G~IG~~va~~l~~~g~-------~v~~~d~~~~~----~--------~~------~~~~~l~ell~~sDi   95 (181)
T d1qp8a1          42 GEKVAVLG-LGEIGTRVGKILAALGA-------QVRGFSRTPKE----G--------PW------RFTNSLEEALREARA   95 (181)
T ss_dssp             TCEEEEES-CSTHHHHHHHHHHHTTC-------EEEEECSSCCC----S--------SS------CCBSCSHHHHTTCSE
T ss_pred             CceEEEec-cccccccceeeeecccc-------ccccccccccc----c--------ce------eeeechhhhhhccch
Confidence            46899999 79999999999887654       79999986421    0        00      012357899999999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      |++..-..  + .++ .++  |.       +.+... +|++++|+++-
T Consensus        96 v~~~~pl~--~-~t~-~li--~~-------~~l~~m-k~~ailIN~~R  129 (181)
T d1qp8a1          96 AVCALPLN--K-HTR-GLV--KY-------QHLALM-AEDAVFVNVGR  129 (181)
T ss_dssp             EEECCCCS--T-TTT-TCB--CH-------HHHTTS-CTTCEEEECSC
T ss_pred             hhcccccc--c-ccc-ccc--cc-------ceeeec-cccceEEeccc
Confidence            99975322  1 111 111  11       233333 47888888874

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.34  E-value=0.014  Score=45.83  Aligned_cols=68  Identities=18%  Similarity=0.306  Sum_probs=39.4

Q ss_pred             CcEEEEEcCCCchHHH-HHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC-CC
Q 020022            5 PVRVLVTGAAGQIGYA-LVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-GV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~-la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~-~a   82 (332)
                      .+||+||| +|.+|+. ....+...+      ..+++++|.++  +.++..+.++..   +     ...++..+.++ +.
T Consensus         1 tirvgiiG-~G~~~~~~~~~~l~~~~------~~~~~~~d~~~--~~~~~~~~~~~~---~-----~~~~~~~~ll~~~i   63 (167)
T d1xeaa1           1 SLKIAMIG-LGDIAQKAYLPVLAQWP------DIELVLCTRNP--KVLGTLATRYRV---S-----ATCTDYRDVLQYGV   63 (167)
T ss_dssp             CEEEEEEC-CCHHHHHTHHHHHTTST------TEEEEEECSCH--HHHHHHHHHTTC---C-----CCCSSTTGGGGGCC
T ss_pred             CeEEEEEc-CCHHHHHHHHHHHHhCC------CcEEEEEECCH--HHHHHHHHhccc---c-----cccccHHHhccccc
Confidence            36999999 6999976 455554332      23788999874  444322222211   1     12244455453 67


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+|+++.
T Consensus        64 D~V~I~t   70 (167)
T d1xeaa1          64 DAVMIHA   70 (167)
T ss_dssp             SEEEECS
T ss_pred             ceecccc
Confidence            9998873

>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Escherichia coli [TaxId: 562]

Probab=95.32  E-value=0.053  Score=43.14  Aligned_cols=77  Identities=12%  Similarity=0.070  Sum_probs=47.5

Q ss_pred             CcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ..||+++| -|  .|..+++..+..-|+       +++++-..+- ..-......+..........+..+.+..++++++
T Consensus         5 ~l~i~~vG-D~~nnv~~Sli~~~~~~g~-------~l~~~~P~~~-~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~a   75 (183)
T d1duvg2           5 EMTLVYAG-DARNNMGNSMLEAAALTGL-------DLRLVAPQAC-WPEAALVTECRALAQQNGGNITLTEDVAKGVEGA   75 (183)
T ss_dssp             GCEEEEES-CTTSHHHHHHHHHHHHHCC-------EEEEECCGGG-CCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTC
T ss_pred             CCEEEEEc-CCccHHHHHHHHHHHHcCC-------EEEEEechHh-hhhHHHHHHHHHHHHhcCCceEEEechhhccccC
Confidence            47999999 34  577777777766553       7888865421 0001111112222112335677888999999999


Q ss_pred             cEEEEeCC
Q 020022           83 NIAVMVGG   90 (332)
Q Consensus        83 DiVi~~ag   90 (332)
                      |+|...--
T Consensus        76 Dvvyt~~w   83 (183)
T d1duvg2          76 DFIYTDVW   83 (183)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEEeh
Confidence            99887644

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.26  E-value=0.019  Score=42.06  Aligned_cols=35  Identities=20%  Similarity=0.264  Sum_probs=30.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .|.|++|+| +|++|.-+|..|...|.       +++|++..+
T Consensus        20 ~p~~vvIiG-gG~~G~E~A~~l~~~g~-------~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVG-GGYIGLELGIAYRKLGA-------QVSVVEARE   54 (115)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHHTC-------EEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHhhccc-------ceEEEeeec
Confidence            468999999 69999999999988764       899998864

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=95.24  E-value=0.039  Score=45.89  Aligned_cols=33  Identities=21%  Similarity=0.268  Sum_probs=29.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      -|.|+||++.+|.+++..|+..|.       +|.+.|+++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga-------~V~~~~~~~   35 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGH-------QIVGIDIRD   35 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-------EEEEEESSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCh
Confidence            457899999999999999999874       799999875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.21  E-value=0.062  Score=45.69  Aligned_cols=36  Identities=19%  Similarity=0.258  Sum_probs=30.3

Q ss_pred             CCcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +.+++.|+||+|  .+|.+++..|++.|.       +|++.++++
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-------~Vvi~~~~~   44 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-------EILVGTWVP   44 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-------EEEEEEEHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-------EEEEEeCch
Confidence            557999999876  699999999999874       788888753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.18  E-value=0.075  Score=37.05  Aligned_cols=70  Identities=11%  Similarity=0.101  Sum_probs=48.2

Q ss_pred             cEEEEEcCCCchHH-HHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            6 VRVLVTGAAGQIGY-ALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         6 ~kI~IiGa~G~vG~-~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      |||-+|| .|.+|. ++|..|...|.       .|.-.|+.++ +..    ..|+....    ++.. ....+.++++|+
T Consensus         2 ~~ihfiG-IgG~GMs~LA~~L~~~G~-------~VsGSD~~~~-~~t----~~L~~~Gi----~i~~-gh~~~~i~~~d~   63 (89)
T d1j6ua1           2 MKIHFVG-IGGIGMSAVALHEFSNGN-------DVYGSNIEET-ERT----AYLRKLGI----PIFV-PHSADNWYDPDL   63 (89)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHTTC-------EEEEECSSCC-HHH----HHHHHTTC----CEES-SCCTTSCCCCSE
T ss_pred             cEEEEEe-ECHHHHHHHHHHHHhCCC-------eEEEEeCCCC-hhH----HHHHHCCC----eEEe-eecccccCCCCE
Confidence            6899999 788886 68889988875       7999998752 212    22444321    2222 234456789999


Q ss_pred             EEEeCCCCC
Q 020022           85 AVMVGGFPR   93 (332)
Q Consensus        85 Vi~~ag~~~   93 (332)
                      ||.+.+++.
T Consensus        64 vV~SsAI~~   72 (89)
T d1j6ua1          64 VIKTPAVRD   72 (89)
T ss_dssp             EEECTTCCT
T ss_pred             EEEecCcCC
Confidence            999988873

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.16  E-value=0.019  Score=44.76  Aligned_cols=38  Identities=21%  Similarity=0.446  Sum_probs=24.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHH-HHHHhcccCCCCCceEEEE-EeCCC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALV-PMIARGVMLGTDQPVILHM-LDIPP   46 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la-~~l~~~~~~~~~~~~ei~L-~D~~~   46 (332)
                      |+ +++||+|+| +|.+|..+. ..|...+.      .|+++ .|+++
T Consensus         1 M~-kkirvaIIG-aG~ig~~~~~~~l~~~~~------~el~avas~~~   40 (157)
T d1nvmb1           1 MN-QKLKVAIIG-SGNIGTDLMIKVLRNAKY------LEMGAMVGIDA   40 (157)
T ss_dssp             CC-SCEEEEEEC-CSHHHHHHHHHHHHHCSS------EEEEEEECSCT
T ss_pred             CC-CCcEEEEEc-CcHHHHHHHHHHHhhCCc------ceEEEEEecch
Confidence            64 457999999 799998654 44433221      25544 57663

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.13  E-value=0.069  Score=41.66  Aligned_cols=35  Identities=26%  Similarity=0.313  Sum_probs=27.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..+|+|+| +|.+|...+..+...|. .     .|...|.++
T Consensus        27 gd~VlI~G-~G~iG~~~~~~a~~~G~-~-----~Vi~~d~~~   61 (171)
T d1pl8a2          27 GHKVLVCG-AGPIGMVTLLVAKAMGA-A-----QVVVTDLSA   61 (171)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-S-----EEEEEESCH
T ss_pred             CCEEEEEC-CCccHHHHHHHHHHcCC-c-----eEEeccCCH
Confidence            35899999 59999998888877653 1     689999874

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=95.12  E-value=0.035  Score=43.18  Aligned_cols=67  Identities=12%  Similarity=0.117  Sum_probs=40.5

Q ss_pred             CcEEEEEcCCCchHHH-HHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYA-LVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~-la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      .+||+||| +|.+|.. ....+...+      ..+ +.++|.++  ++++....++   ..+      ..++..+.+++.
T Consensus         1 Kiri~iIG-~G~~g~~~~~~~l~~~~------~~~i~~v~d~~~--~~~~~~~~~~---~~~------~~~~~~~l~~~~   62 (164)
T d1tlta1           1 KLRIGVVG-LGGIAQKAWLPVLAAAS------DWTLQGAWSPTR--AKALPICESW---RIP------YADSLSSLAASC   62 (164)
T ss_dssp             CEEEEEEC-CSTHHHHTHHHHHHSCS------SEEEEEEECSSC--TTHHHHHHHH---TCC------BCSSHHHHHTTC
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHhCC------CcEEEEEEechh--Hhhhhhhhcc---ccc------ccccchhhhhhc
Confidence            36999999 7999975 555555432      123 56888875  3333222211   111      334566667899


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+|+++.
T Consensus        63 D~V~I~t   69 (164)
T d1tlta1          63 DAVFVHS   69 (164)
T ss_dssp             SEEEECS
T ss_pred             ccccccc
Confidence            9998873

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.10  E-value=0.034  Score=43.33  Aligned_cols=76  Identities=14%  Similarity=0.037  Sum_probs=47.4

Q ss_pred             CcEEEEEc-CCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH-HHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTG-AAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK-MELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiG-a~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~-~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ..||+++| +...|-.+++..+..-|.       ++++.-..+-  ...... .............+..+.+..+|++++
T Consensus         3 g~ki~~vGD~~nnV~~Sli~~~~~~g~-------~i~~~~P~~~--~~~~~~~~~~~~~~~~~~~~i~~~~d~~~ai~~a   73 (161)
T d1vlva2           3 GVKVVFMGDTRNNVATSLMIACAKMGM-------NFVACGPEEL--KPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGA   73 (161)
T ss_dssp             TCEEEEESCTTSHHHHHHHHHHHHTTC-------EEEEESCGGG--CCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTC
T ss_pred             CCEEEEEcCCccHHHHHHHHHHHHcCC-------EEEEecchhh--hhhhhHHHHHHHHHhhcCCceEEEecHHHhhhhh
Confidence            46999999 334677777777766553       7888865321  111111 111121112234778888999999999


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+|+...
T Consensus        74 Dviyt~~   80 (161)
T d1vlva2          74 DVVYTDV   80 (161)
T ss_dssp             SEEEECC
T ss_pred             hheeccc
Confidence            9998864

>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

Probab=95.03  E-value=0.012  Score=50.83  Aligned_cols=111  Identities=15%  Similarity=0.178  Sum_probs=62.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCC-CC---ceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGT-DQ---PVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~-~~---~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      .||.|.| +|..|..++.+|+....... ..   .-.+.++|.+.   .+.....|+.....++........++.++++.
T Consensus        26 ~kivi~G-AGaAg~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~G---lv~~~r~d~~~~k~~~a~~~~~~~~l~~~i~~  101 (308)
T d1o0sa1          26 EKYLFFG-AGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDG---LVTKNRKEMNPRHVQFAKDMPETTSILEVIRA  101 (308)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTE---ECBTTCSSCCGGGTTTCBSSCCCCCHHHHHHH
T ss_pred             cEEEEEC-cCHHHHHHHHHHHHHHHhcCCchhhhhceEEEEeCCC---CccCCCcccCHHHHHHHHhcccCCcHHHHHhc
Confidence            5899999 69999998888765422110 00   00499999863   33222234443333333332223345555553


Q ss_pred             C--cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           82 V--NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        82 a--DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      +  +++|-+.+.+   |..           .+++.+.+.+++ ++.+|+-.|||..
T Consensus       102 ~kptvliG~s~~~---g~f-----------t~evv~~Ma~~~-~~PIIFaLSNPtp  142 (308)
T d1o0sa1         102 ARPGALIGASTVR---GAF-----------NEEVIRAMAEIN-ERPIIFALSNPTS  142 (308)
T ss_dssp             HCCSEEEECSSCT---TCS-----------CHHHHHHHHHHC-SSCEEEECCSSGG
T ss_pred             cccccEEeccccc---CCC-----------CHHHHHHHHhhC-CCcEEEEccCCCC
Confidence            3  4666555443   221           124556666777 5677777899975

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.99  E-value=0.014  Score=48.53  Aligned_cols=36  Identities=17%  Similarity=0.255  Sum_probs=31.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ....||+||| +|..|..+|..|+..|+       +++++|.++
T Consensus         2 ~~~~kV~IiG-aG~aGl~~A~~L~~~G~-------~v~v~Er~~   37 (265)
T d2voua1           2 PTTDRIAVVG-GSISGLTAALMLRDAGV-------DVDVYERSP   37 (265)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSS
T ss_pred             CCCCcEEEEC-cCHHHHHHHHHHHHCCC-------CEEEEeCCC
Confidence            3467999999 69999999999998875       899999764

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.91  E-value=0.026  Score=44.85  Aligned_cols=69  Identities=9%  Similarity=0.020  Sum_probs=40.4

Q ss_pred             CCcEEEEEcCCCchHHH-HHHHHHhcccCCCCCceEE-EEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC-
Q 020022            4 EPVRVLVTGAAGQIGYA-LVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~-la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~-   80 (332)
                      +++||+||| +|.+|.. .+..+...+   .  ..+| .++|.++  ++++....++.        ....+++..+.++ 
T Consensus         2 kkirigiIG-~G~~g~~~h~~~l~~~~---~--~~~i~~v~d~~~--~~~~~~~~~~~--------~~~~~~~~~ell~~   65 (181)
T d1zh8a1           2 RKIRLGIVG-CGIAARELHLPALKNLS---H--LFEITAVTSRTR--SHAEEFAKMVG--------NPAVFDSYEELLES   65 (181)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHHHTTT---T--TEEEEEEECSSH--HHHHHHHHHHS--------SCEEESCHHHHHHS
T ss_pred             CCcEEEEEc-CCHHHHHHHHHHHHhCC---C--CeEEEEEEeccH--hhhhhhhcccc--------ccceeeeeeccccc
Confidence            567999999 7999986 455565421   1  1244 4788873  33322211111        1124566777664 


Q ss_pred             -CCcEEEEe
Q 020022           81 -GVNIAVMV   88 (332)
Q Consensus        81 -~aDiVi~~   88 (332)
                       +.|+|+++
T Consensus        66 ~~id~v~I~   74 (181)
T d1zh8a1          66 GLVDAVDLT   74 (181)
T ss_dssp             SCCSEEEEC
T ss_pred             cccceeecc
Confidence             57888887

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.91  E-value=0.031  Score=44.33  Aligned_cols=69  Identities=10%  Similarity=0.041  Sum_probs=43.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEE-EEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc--CCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC--TGV   82 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al--~~a   82 (332)
                      +||+||| +|.+|+..+..+...+-      .+|+ ++|+++  ++++..    ... .......+..++.++.+  .+.
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~------~~i~ai~d~~~--~~~~~~----~~~-~~~~~~~~~~~~~~~ll~~~~i   67 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPN------ATISGVASRSL--EKAKAF----ATA-NNYPESTKIHGSYESLLEDPEI   67 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTT------EEEEEEECSSH--HHHHHH----HHH-TTCCTTCEEESSHHHHHHCTTC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCC------CEEEEEEeCCc--cccccc----hhc-cccccceeecCcHHHhhhcccc
Confidence            6999999 79999998888765421      2444 778873  333322    111 11223344566776655  468


Q ss_pred             cEEEEe
Q 020022           83 NIAVMV   88 (332)
Q Consensus        83 DiVi~~   88 (332)
                      |+|+++
T Consensus        68 D~v~I~   73 (184)
T d1ydwa1          68 DALYVP   73 (184)
T ss_dssp             CEEEEC
T ss_pred             ceeeec
Confidence            999987

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.90  E-value=0.022  Score=46.21  Aligned_cols=63  Identities=14%  Similarity=0.129  Sum_probs=44.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+| .|.||+.++..+..-|+       +|..||.....     . .. ... .       ...++.+.++.||+
T Consensus        43 gk~vgIiG-~G~IG~~va~~l~~fg~-------~V~~~d~~~~~-----~-~~-~~~-~-------~~~~l~~~l~~sDi   99 (197)
T d1j4aa1          43 DQVVGVVG-TGHIGQVFMQIMEGFGA-------KVITYDIFRNP-----E-LE-KKG-Y-------YVDSLDDLYKQADV   99 (197)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSCCH-----H-HH-HTT-C-------BCSCHHHHHHHCSE
T ss_pred             CCeEEEec-ccccchhHHHhHhhhcc-------cccccCccccc-----c-cc-cce-e-------eecccccccccccc
Confidence            37999999 79999999999976553       78999976321     1 00 111 1       12367888999999


Q ss_pred             EEEeCC
Q 020022           85 AVMVGG   90 (332)
Q Consensus        85 Vi~~ag   90 (332)
                      |++..-
T Consensus       100 i~~~~p  105 (197)
T d1j4aa1         100 ISLHVP  105 (197)
T ss_dssp             EEECSC
T ss_pred             ccccCC
Confidence            999854

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.87  E-value=0.013  Score=50.11  Aligned_cols=34  Identities=24%  Similarity=0.415  Sum_probs=30.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      +++||+||| +|..|.+.|..|.+.|.       +|+++|..
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~-------~V~vlE~~   62 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGH-------QVTVLEAS   62 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTC-------EEEEECSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCC-------CEEEEeCC
Confidence            568999999 69999999999999874       79999875

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=94.82  E-value=0.033  Score=43.70  Aligned_cols=36  Identities=19%  Similarity=0.300  Sum_probs=29.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +.+||+|+| +|.++.++++.|...+. .     +|.+++++.
T Consensus        16 ~~~~vlIlG-aGGaarai~~aL~~~g~-~-----~I~I~nR~~   51 (167)
T d1npya1          16 KNAKVIVHG-SGGMAKAVVAAFKNSGF-E-----KLKIYARNV   51 (167)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTC-C-----CEEEECSCH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCC-C-----EEEEecccH
Confidence            346899999 69999999999998764 2     689999874

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.73  E-value=0.027  Score=41.33  Aligned_cols=36  Identities=25%  Similarity=0.271  Sum_probs=30.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..|+||+||| +|++|.-+|..|...|.       ++++++..+
T Consensus        20 ~~p~~v~IiG-gG~ig~E~A~~l~~~G~-------~Vtlve~~~   55 (117)
T d1ebda2          20 EVPKSLVVIG-GGYIGIELGTAYANFGT-------KVTILEGAG   55 (117)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESSS
T ss_pred             hcCCeEEEEC-CCccceeeeeeeccccc-------EEEEEEecc
Confidence            3578999999 69999999999998774       899998764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=94.71  E-value=0.046  Score=43.42  Aligned_cols=76  Identities=13%  Similarity=0.069  Sum_probs=46.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh---hhHHHHhhhhcCCccceEeeC---Chhhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN---GVKMELVDAAFPLLKGVVATT---DAVEA   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~---~~~~dl~~~~~~~~~~~~~~~---~~~~a   78 (332)
                      .++|+|+| +|.+|.+++..|...+. .     +|++++++.  +.+.   .....+... ......+.-..   +..+.
T Consensus        18 ~k~vlIlG-aGGaarai~~al~~~g~-~-----~i~i~nR~~--~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~   87 (182)
T d1vi2a1          18 GKTMVLLG-AGGASTAIGAQGAIEGL-K-----EIKLFNRRD--EFFDKALAFAQRVNEN-TDCVVTVTDLADQQAFAEA   87 (182)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-S-----EEEEEECSS--TTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHH
T ss_pred             CCEEEEEC-CcHHHHHHHHHHhhcCC-c-----eEeeeccch--HHHHHHHHHHHHHHhh-cCcceEeeecccccchhhh
Confidence            46999999 69999999999998764 2     799999975  3332   122222211 11111111111   23456


Q ss_pred             cCCCcEEEEeCC
Q 020022           79 CTGVNIAVMVGG   90 (332)
Q Consensus        79 l~~aDiVi~~ag   90 (332)
                      +.++|+||.+-.
T Consensus        88 ~~~~diiIN~Tp   99 (182)
T d1vi2a1          88 LASADILTNGTK   99 (182)
T ss_dssp             HHTCSEEEECSS
T ss_pred             hcccceeccccC
Confidence            789999999853

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.55  E-value=0.027  Score=41.75  Aligned_cols=36  Identities=22%  Similarity=0.426  Sum_probs=31.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..|+|++||| +|++|.-+|..|...|.       ++++++..+
T Consensus        21 ~~p~~~vIiG-~G~ig~E~A~~l~~lG~-------~Vtii~~~~   56 (122)
T d1v59a2          21 EIPKRLTIIG-GGIIGLEMGSVYSRLGS-------KVTVVEFQP   56 (122)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSS
T ss_pred             cCCCeEEEEC-CCchHHHHHHHHHhhCc-------ceeEEEecc
Confidence            3578999999 69999999999998764       899999864

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=94.49  E-value=0.12  Score=39.98  Aligned_cols=34  Identities=29%  Similarity=0.265  Sum_probs=27.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..+|+|+| +|.+|...+..+...|.       ++..+|.++
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga-------~vi~v~~~~   60 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGA-------FVVCTARSP   60 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESCH
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcc-------cccccchHH
Confidence            36899999 69999998888877663       688999874

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=94.49  E-value=0.21  Score=41.84  Aligned_cols=44  Identities=23%  Similarity=0.229  Sum_probs=32.0

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV   59 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~   59 (332)
                      +.|+||++.+|.+++..|+..|.       +|++.|.+. ++.++....++.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga-------~V~i~~~~~-~~~~~~~~~~l~   48 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGY-------AVCLHYHRS-AAEANALSATLN   48 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC-------EEEEEESSC-HHHHHHHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCC-------EEEEEeCCC-HHHHHHHHHHHH
Confidence            45779999999999999999874       788877764 344444444443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.40  E-value=0.053  Score=45.14  Aligned_cols=158  Identities=15%  Similarity=0.104  Sum_probs=80.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe--e--CChh---h
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA--T--TDAV---E   77 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~--~--~~~~---~   77 (332)
                      |++|.||||++.+|..++..|+...--+    ..|.+.++++  ++++.. .++.... ....-+..  +  .+..   +
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g----~~V~~~~r~~--~~~~~~-~~~~~~~-~~~~~~~~Dvs~~~~v~~~~~   73 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPP----QHLFTTCRNR--EQAKEL-EDLAKNH-SNIHILEIDLRNFDAYDKLVA   73 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCC----SEEEEEESCT--TSCHHH-HHHHHHC-TTEEEEECCTTCGGGHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCC----CEEEEEECCH--HHHHHH-HHHHhcC-CcEEEEEEEeccHHHHHHHHh
Confidence            3579999999999999999887521111    1789999885  444422 2222211 10000000  0  0111   1


Q ss_pred             ------hcCCCcEEEEeCCCCCCCC----CCHH---HHHHhhH----HHHHHHHHHHHhhc---------CCCeEEEEec
Q 020022           78 ------ACTGVNIAVMVGGFPRKEG----MERK---DVMSKNV----SIYKAQASALEQHA---------APNCKVLVVA  131 (332)
Q Consensus        78 ------al~~aDiVi~~ag~~~~~~----~~r~---~~~~~n~----~i~~~i~~~i~~~~---------~~~~~viv~t  131 (332)
                            .....|++|..||+....+    .+.+   ..+..|+    ..++.+.+.+++..         .....+|+++
T Consensus        74 ~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~  153 (248)
T d1snya_          74 DIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  153 (248)
T ss_dssp             HHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             hhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccc
Confidence                  1235899999999754322    2322   3444554    44555666665531         1234566766


Q ss_pred             CcccchHHHHHHhCCCCCC-Cc-EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022          132 NPANTNALILKEFAPSIPA-KN-ITCLTRLDHNRALGQISEKLNVQVSDVK  180 (332)
Q Consensus       132 NP~~~~~~~~~~~~~~~~~-~~-i~~~t~lds~r~~~~la~~l~v~~~~v~  180 (332)
                      .-...+        .+.+. .. .++.++..-..|-+.+|..+.  +.+|+
T Consensus       154 S~~g~~--------~~~~~~~~~~Y~aSKaal~~lt~~la~e~~--~~gI~  194 (248)
T d1snya_         154 SILGSI--------QGNTDGGMYAYRTSKSALNAATKSLSVDLY--PQRIM  194 (248)
T ss_dssp             CGGGCS--------TTCCSCCCHHHHHHHHHHHHHHHHHHHHHG--GGTCE
T ss_pred             cccccc--------CCCCCCChHHHHHHHHHHHHHHHHHHHHhC--CCCeE
Confidence            433211        11111 11 234444444566666776654  34565

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.30  E-value=0.034  Score=40.73  Aligned_cols=36  Identities=33%  Similarity=0.365  Sum_probs=30.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..|+||+||| +|++|.-+|..|...|.       ++++++..+
T Consensus        19 ~~p~~vvIiG-gG~ig~E~A~~l~~~G~-------~Vtlve~~~   54 (116)
T d1gesa2          19 ALPERVAVVG-AGYIGVELGGVINGLGA-------KTHLFEMFD   54 (116)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSS
T ss_pred             hCCCEEEEEC-CChhhHHHHHHhhcccc-------EEEEEeecc
Confidence            3478999999 69999999999988764       899999874

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.24  E-value=0.026  Score=49.18  Aligned_cols=36  Identities=11%  Similarity=0.209  Sum_probs=29.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ++||+||| +|..|.++|..|+..+...     ++++++.++
T Consensus         4 ~KrVaIIG-aG~sGl~~A~~L~~~~~~~-----~v~vfEk~~   39 (335)
T d2gv8a1           4 IRKIAIIG-AGPSGLVTAKALLAEKAFD-----QVTLFERRG   39 (335)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCCS-----EEEEECSSS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHhCCCC-----CEEEEECCC
Confidence            46899999 6999999999888766432     799999874

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=94.22  E-value=0.047  Score=41.88  Aligned_cols=100  Identities=8%  Similarity=0.083  Sum_probs=56.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-C----hhhhcC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-D----AVEACT   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-~----~~~al~   80 (332)
                      -+|.|+| .|.+|..++..|...+.       +++++|.++  +.......++.....   .-+.... +    ....+.
T Consensus         4 nHiII~G-~g~~g~~l~~~L~~~~~-------~v~vId~d~--~~~~~~~~~~~~~~~---~vi~Gd~~d~~~L~~a~i~   70 (153)
T d1id1a_           4 DHFIVCG-HSILAINTILQLNQRGQ-------NVTVISNLP--EDDIKQLEQRLGDNA---DVIPGDSNDSSVLKKAGID   70 (153)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHTTC-------CEEEEECCC--HHHHHHHHHHHCTTC---EEEESCTTSHHHHHHHTTT
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCC-------CEEEEeccc--hhHHHHHHHhhcCCc---EEEEccCcchHHHHHhccc
Confidence            3799999 69999999999988763       688999875  222222222211110   0111111 1    234567


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-Ccc
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPA  134 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~  134 (332)
                      .||.||++.+.         |  ..|+.+    +..+++.. |+..++.-+ +|-
T Consensus        71 ~a~~vi~~~~~---------d--~~n~~~----~~~~r~~~-~~~~iia~~~~~~  109 (153)
T d1id1a_          71 RCRAILALSDN---------D--ADNAFV----VLSAKDMS-SDVKTVLAVSDSK  109 (153)
T ss_dssp             TCSEEEECSSC---------H--HHHHHH----HHHHHHHT-SSSCEEEECSSGG
T ss_pred             cCCEEEEcccc---------H--HHHHHH----HHHHHHhC-CCCceEEEEcCHH
Confidence            89999998431         1  235433    34455665 455565554 453

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.15  E-value=0.043  Score=43.33  Aligned_cols=81  Identities=16%  Similarity=0.105  Sum_probs=43.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEE-EEeCCCchhhhhhhHHHHhhhh-cCC------ccceEeeCChh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAA-FPL------LKGVVATTDAV   76 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~l~~~~~dl~~~~-~~~------~~~~~~~~~~~   76 (332)
                      |+||+|-| -|.+|..+...+...+-      ++++ .-|..++.........+..... ...      ...+.+..+..
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~d------i~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~   73 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDD------MKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVD   73 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSS------EEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHH
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCC------ceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChh
Confidence            46999999 89999998887766541      3444 4444432111111111111000 000      01233333456


Q ss_pred             hhcCCCcEEEEeCCCC
Q 020022           77 EACTGVNIAVMVGGFP   92 (332)
Q Consensus        77 ~al~~aDiVi~~ag~~   92 (332)
                      .++.++|+||.+-|..
T Consensus        74 ~~~~~vDvViEcTG~f   89 (171)
T d1cf2o1          74 DMLDEADIVIDCTPEG   89 (171)
T ss_dssp             HHHHTCSEEEECCSTT
T ss_pred             HhhcCCCEEEEccCCC
Confidence            6678999999986643

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.99  E-value=0.02  Score=45.35  Aligned_cols=35  Identities=14%  Similarity=0.260  Sum_probs=29.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ++||+||| +|..|...|..|.+.|. .     +++++|..+
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~-~-----~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGY-S-----DITIFEKQE   38 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTC-C-----CEEEEESSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCC-C-----eEEEEEecC
Confidence            57999999 69999999999999875 1     488999864

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.98  E-value=0.035  Score=44.98  Aligned_cols=90  Identities=17%  Similarity=0.127  Sum_probs=56.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA   85 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV   85 (332)
                      ++|+|+| .|.+|+.++..|..-|+       ++..||.....    +...           .+. ..++.+.++.||+|
T Consensus        46 ktvgIiG-~G~IG~~va~~l~~fg~-------~v~~~d~~~~~----~~~~-----------~~~-~~~l~~l~~~~D~v  101 (199)
T d1dxya1          46 QTVGVMG-TGHIGQVAIKLFKGFGA-------KVIAYDPYPMK----GDHP-----------DFD-YVSLEDLFKQSDVI  101 (199)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSCCS----SCCT-----------TCE-ECCHHHHHHHCSEE
T ss_pred             eeeeeee-cccccccccccccccce-------eeeccCCccch----hhhc-----------chh-HHHHHHHHHhcccc
Confidence            6999999 79999999999986553       89999976311    0000           111 23577888999999


Q ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022           86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP  133 (332)
Q Consensus        86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP  133 (332)
                      ++..-....   ++ .+  -|.       +.+... ++++++|+++-.
T Consensus       102 ~~~~plt~~---T~-~l--i~~-------~~l~~m-k~~a~lIN~aRG  135 (199)
T d1dxya1         102 DLHVPGIEQ---NT-HI--INE-------AAFNLM-KPGAIVINTARP  135 (199)
T ss_dssp             EECCCCCGG---GT-TS--BCH-------HHHHHS-CTTEEEEECSCT
T ss_pred             eeeeccccc---cc-cc--ccH-------HHhhcc-CCceEEEecccH
Confidence            997533211   10 01  121       223333 478889998853

>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.97  E-value=0.042  Score=47.16  Aligned_cols=111  Identities=16%  Similarity=0.213  Sum_probs=61.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCC-CCC---ceEEEEEeCCCchhhh-hhhHHHHhhhhcCCcc--ceEeeCChhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLG-TDQ---PVILHMLDIPPAAEAL-NGVKMELVDAAFPLLK--GVVATTDAVEA   78 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~-~~~---~~ei~L~D~~~~~~~l-~~~~~dl~~~~~~~~~--~~~~~~~~~~a   78 (332)
                      .||.|.| +|..|..++..|...+... ...   .-.|.++|.+.   .+ ++..-++.....++..  .-....++.++
T Consensus        26 ~kiv~~G-AGsAg~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~G---lv~~~r~~~~~~~k~~~a~~~~~~~~~~L~e~  101 (294)
T d1pj3a1          26 HKILFLG-AGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYG---LLVKGRKAKIDSYQEPFTHSAPESIPDTFEDA  101 (294)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTE---ECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHH
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHHHHhcCCchhhccccEEEEeCCC---CccCCCCcccHHHHHHhhccccccchhHHHHH
Confidence            5899999 6999999998876543210 000   01499999853   22 1111111111111111  10112356777


Q ss_pred             cC--CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           79 CT--GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        79 l~--~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      ++  +.|++|-+.|.+.   .           +.+++.+.+.+.+ ++.+|+-.|||..
T Consensus       102 i~~~kptvliG~S~~~g---~-----------ft~evi~~Ma~~~-~~PIIFaLSNPt~  145 (294)
T d1pj3a1         102 VNILKPSTIIGVAGAGR---L-----------FTPDVIRAMASIN-ERPVIFALSNPTA  145 (294)
T ss_dssp             HHHHCCSEEEECCCSSC---C-----------SCHHHHHHHHHHC-SSCEEEECCSSGG
T ss_pred             HHhcCCceEEEecCCCC---c-----------CCHHHHHHHHhcC-CCcEEEEccCCCC
Confidence            65  7888877765432   1           1135566666777 5677777899975

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.95  E-value=0.025  Score=47.28  Aligned_cols=33  Identities=36%  Similarity=0.576  Sum_probs=29.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      .||+|+| +|.+|++++..|+..|+ +     +|+|+|-+
T Consensus        31 ~~VliiG-~GglGs~va~~La~~Gv-g-----~i~lvD~D   63 (247)
T d1jw9b_          31 SRVLIVG-LGGLGCAASQYLASAGV-G-----NLTLLDFD   63 (247)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTC-S-----EEEEECCC
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEECCc
Confidence            6999999 69999999999999986 4     89999976

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.94  E-value=0.037  Score=44.06  Aligned_cols=35  Identities=23%  Similarity=0.265  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +++||+||| +|..|...|..|.+.|.       ++.|+|..+
T Consensus        42 ~~k~V~IIG-aGPAGL~AA~~la~~G~-------~Vtl~E~~~   76 (179)
T d1ps9a3          42 QKKNLAVVG-AGPAGLAFAINAAARGH-------QVTLFDAHS   76 (179)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTC-------EEEEEESSS
T ss_pred             CCcEEEEEC-ccHHHHHHHHHHHhhcc-------ceEEEeccC
Confidence            468999999 69999999999998874       899999864

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=93.89  E-value=0.53  Score=38.75  Aligned_cols=116  Identities=13%  Similarity=0.101  Sum_probs=65.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC-chhhhhhhHHHHhhhhcCCccceEee-CC--------
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAAFPLLKGVVAT-TD--------   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-~~~~l~~~~~dl~~~~~~~~~~~~~~-~~--------   74 (332)
                      ...|.|+||+|.+|..++..|+..|. .     .|+|+.+++ +.+.++....++....    .++... .|        
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga-~-----~vvl~~R~~~~~~~~~~~~~~l~~~g----~~v~~~~~Dv~d~~~~~   78 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGA-P-----HLLLVSRSGPDADGAGELVAELEALG----ARTTVAACDVTDRESVR   78 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTC-S-----EEEEEESSGGGSTTHHHHHHHHHHTT----CEEEEEECCTTCHHHHH
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCC-C-----EEEEEeCCccCHHHHHHHHHHHHhcc----ccccccccccchHHHHH
Confidence            35799999999999999999998874 1     478887642 1122222233333211    111110 01        


Q ss_pred             -hhhhcC---CCcEEEEeCCCCCCCC---CCHH---HHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           75 -AVEACT---GVNIAVMVGGFPRKEG---MERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        75 -~~~al~---~aDiVi~~ag~~~~~~---~~r~---~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                       ..+.+.   ..|.||+.+|......   .+..   ..+..|+.....+.+.+.... . ..++++|.
T Consensus        79 ~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~-~~iv~~SS  144 (259)
T d2fr1a1          79 ELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-L-TAFVLFSS  144 (259)
T ss_dssp             HHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-C-SEEEEEEE
T ss_pred             HhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-C-ceEeeecc
Confidence             111122   4788999998764332   2332   234567776666666665542 3 45666663

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.83  E-value=0.028  Score=46.85  Aligned_cols=32  Identities=25%  Similarity=0.267  Sum_probs=28.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      +||+||| +|..|.+.|..|++.|.       ++.++|..
T Consensus         2 KkV~IIG-aG~aGL~aA~~La~~G~-------~V~vlE~~   33 (373)
T d1seza1           2 KRVAVIG-AGVSGLAAAYKLKIHGL-------NVTVFEAE   33 (373)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTSC-------EEEEECSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCC-------CEEEEeCC
Confidence            6999999 69999999999998874       79999865

>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=93.82  E-value=0.045  Score=47.03  Aligned_cols=110  Identities=12%  Similarity=0.177  Sum_probs=60.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhc----ccCCCCCce-EEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARG----VMLGTDQPV-ILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~~~-ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~   80 (332)
                      .||.|.| +|..|..++..|+..    |+ +..+.. .+.++|.+.   .+.....|+.+...++.....-..++.+.++
T Consensus        26 ~kiV~~G-AGsAg~gia~~l~~~~~~~G~-~~~~a~~~i~l~D~kG---lv~~~R~~l~~~k~~~a~~~~~~~~l~~~i~  100 (298)
T d1gq2a1          26 HTVLFQG-AGEAALGIANLIVMAMQKEGV-SKEEAIKRIWMVDSKG---LIVKGRASLTPEKEHFAHEHCEMKNLEDIVK  100 (298)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHHHHHHTC-CHHHHHTTEEEEETTE---ECBTTCSSCCTTGGGGCBSCCCCCCHHHHHH
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHHHHHcCC-ChhhccceEEEEeCCC---cccCCCcccCHHHHHHHHHhhhhhhhHHHhh
Confidence            5899999 699999988887643    22 100000 599999863   3322233443322222212112234444444


Q ss_pred             C--CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           81 G--VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        81 ~--aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      .  .+++|-+.+.+   |.-           .+++.+.+.+++ ++.+|+-.|||..
T Consensus       101 ~vkptvliG~s~~~---g~f-----------t~evv~~ma~~~-~~PIIFaLSNPt~  142 (298)
T d1gq2a1         101 DIKPTVLIGVAAIG---GAF-----------TQQILQDMAAFN-KRPIIFALSNPTS  142 (298)
T ss_dssp             HHCCSEEEECSCCT---TCS-----------CHHHHHHHHHHC-SSCEEEECCSSGG
T ss_pred             ccChheeEeccccc---CcC-----------CHHHHHHHHhhC-CCCEEEEccCCCC
Confidence            3  55666665544   221           124555666777 5677777899975

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.76  E-value=0.0074  Score=47.95  Aligned_cols=79  Identities=9%  Similarity=0.098  Sum_probs=47.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC--ChhhhcCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT--DAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~--~~~~al~~a   82 (332)
                      .++|+|||.+.-||..++.+|++.+.       .+.+.+.+............+.+..   ...+...+  ..++....|
T Consensus        29 GK~vvVIGrS~iVG~Pla~lL~~~ga-------TVt~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~lk~~~~~a   98 (171)
T d1edza1          29 GKKCIVINRSEIVGRPLAALLANDGA-------TVYSVDVNNIQKFTRGESLKLNKHH---VEDLGEYSEDLLKKCSLDS   98 (171)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTSC-------EEEEECSSEEEEEESCCCSSCCCCE---EEEEEECCHHHHHHHHHHC
T ss_pred             CCEEEEECCccccHHHHHHHHHHCCC-------EEEEeccccccccccccceeeeeec---cccccccchhHHhhccccC
Confidence            47999999777889999999998763       6888887531111111111111110   11111111  256677799


Q ss_pred             cEEEEeCCCCC
Q 020022           83 NIAVMVGGFPR   93 (332)
Q Consensus        83 DiVi~~ag~~~   93 (332)
                      |+||.+.|.+.
T Consensus        99 DIvIsavG~p~  109 (171)
T d1edza1          99 DVVITGVPSEN  109 (171)
T ss_dssp             SEEEECCCCTT
T ss_pred             CEEEEccCCCc
Confidence            99999998764

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.76  E-value=0.077  Score=41.29  Aligned_cols=67  Identities=15%  Similarity=0.147  Sum_probs=48.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      -++++|+| -|.+|..+|..+...|.       .+..+++++- ..+++ .+   |.       +.+ ....++++.+|+
T Consensus        23 Gk~vvV~G-YG~vGrG~A~~~rg~Ga-------~V~V~E~DPi-~alqA-~m---dG-------f~v-~~~~~a~~~aDi   81 (163)
T d1v8ba1          23 GKIVVICG-YGDVGKGCASSMKGLGA-------RVYITEIDPI-CAIQA-VM---EG-------FNV-VTLDEIVDKGDF   81 (163)
T ss_dssp             TSEEEEEC-CSHHHHHHHHHHHHHTC-------EEEEECSCHH-HHHHH-HT---TT-------CEE-CCHHHHTTTCSE
T ss_pred             CCEEEEec-ccccchhHHHHHHhCCC-------EEEEEecCch-hhHHH-Hh---cC-------Ccc-CchhHccccCcE
Confidence            47999999 79999999999998774       7899998851 11211 01   21       223 357899999999


Q ss_pred             EEEeCCCC
Q 020022           85 AVMVGGFP   92 (332)
Q Consensus        85 Vi~~ag~~   92 (332)
                      +|.+-|..
T Consensus        82 ~vTaTGn~   89 (163)
T d1v8ba1          82 FITCTGNV   89 (163)
T ss_dssp             EEECCSSS
T ss_pred             EEEcCCCC
Confidence            99987654

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.75  E-value=0.091  Score=41.27  Aligned_cols=56  Identities=14%  Similarity=0.175  Sum_probs=41.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|||.+.-||..++.+|++.+.       .+..++...                          .++.+-+++||+
T Consensus        39 Gk~vvVIGrS~iVGrPLa~lL~~~ga-------tVt~~~~~t--------------------------~~l~~~~~~aDi   85 (170)
T d1a4ia1          39 GRHAVVVGRSKIVGAPMHDLLLWNNA-------TVTTCHSKT--------------------------AHLDEEVNKGDI   85 (170)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHHTTC-------EEEEECTTC--------------------------SSHHHHHTTCSE
T ss_pred             cceEEEEecCCccchHHHHHHHhccC-------ceEEEeccc--------------------------ccHHHHHhhccc
Confidence            47999999877899999999998763       688887542                          123344678888


Q ss_pred             EEEeCCCCC
Q 020022           85 AVMVGGFPR   93 (332)
Q Consensus        85 Vi~~ag~~~   93 (332)
                      ||.+.|.+.
T Consensus        86 vi~a~G~~~   94 (170)
T d1a4ia1          86 LVVATGQPE   94 (170)
T ss_dssp             EEECCCCTT
T ss_pred             hhhcccccc
Confidence            888887653

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.71  E-value=0.027  Score=44.91  Aligned_cols=77  Identities=18%  Similarity=0.094  Sum_probs=44.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEE-EeCCCchhhhhhhHHHHhhhhcC---------CccceEeeCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHM-LDIPPAAEALNGVKMELVDAAFP---------LLKGVVATTD   74 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L-~D~~~~~~~l~~~~~dl~~~~~~---------~~~~~~~~~~   74 (332)
                      |.||+|.| .|.+|..++..+...+-      ++++. -|..+... .  ...-..+....         ....+.+..+
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~d------ievVaInd~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~   70 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPD------MKLVGVAKTSPNYE-A--FIAHRRGIRIYVPQQSIKKFEESGIPVAGT   70 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTT------EEEEEEECSSCSHH-H--HHHHHTTCCEECCGGGHHHHHTTTCCCCCC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCC------CEEEEEECCCCcHH-H--HHhcccCcceeccCccceeccccceecCCc
Confidence            46999999 89999999998887531      34444 45543211 1  11100010000         0123344456


Q ss_pred             hhhhcCCCcEEEEeCCC
Q 020022           75 AVEACTGVNIAVMVGGF   91 (332)
Q Consensus        75 ~~~al~~aDiVi~~ag~   91 (332)
                      ....+.++|+||.+-|.
T Consensus        71 ~~~~~~~vDiViecTG~   87 (178)
T d1b7go1          71 VEDLIKTSDIVVDTTPN   87 (178)
T ss_dssp             HHHHHHHCSEEEECCST
T ss_pred             hhhhhhcCCEEEECCCC
Confidence            67777899999998664

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.71  E-value=0.021  Score=47.67  Aligned_cols=32  Identities=22%  Similarity=0.254  Sum_probs=28.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      |||+||| +|..|.+.|..|.+.|.       ++.|++..
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G~-------~V~vlE~~   32 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRGT-------DAVLLESS   32 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTTC-------CEEEECSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCC-------CEEEEecC
Confidence            5899999 69999999999998874       68999875

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.56  E-value=0.04  Score=45.76  Aligned_cols=35  Identities=20%  Similarity=0.386  Sum_probs=29.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |+||+||| +|..|.++|..|.+.|+.      .+.+++..+
T Consensus         1 ~~~V~IvG-aG~aGl~~A~~L~~~Gi~------~V~V~Er~~   35 (288)
T d3c96a1           1 PIDILIAG-AGIGGLSCALALHQAGIG------KVTLLESSS   35 (288)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCS------EEEEEESSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCC------eEEEEeCCC
Confidence            67999999 699999999999988742      688998865

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.54  E-value=0.038  Score=47.94  Aligned_cols=41  Identities=22%  Similarity=0.370  Sum_probs=32.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK   55 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~   55 (332)
                      +++||+||| +|..|.+.|..|...|.       +|.+++.++   .+-|.+
T Consensus         1 k~KKI~IIG-aG~sGL~aA~~L~k~G~-------~V~viEk~~---~iGG~~   41 (314)
T d2bi7a1           1 KSKKILIVG-AGFSGAVIGRQLAEKGH-------QVHIIDQRD---HIGGNS   41 (314)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHTTTC-------EEEEEESSS---SSSGGG
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhCCC-------CEEEEECCC---CCcCee
Confidence            357999999 69999999999998763       799999763   445544

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.51  E-value=0.041  Score=40.73  Aligned_cols=35  Identities=17%  Similarity=0.151  Sum_probs=29.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ..|.|++||| +|.+|.-+|..|...|.       +++++..+
T Consensus        18 ~~P~~vvIIG-gG~iG~E~A~~l~~lG~-------~Vtii~~~   52 (122)
T d1h6va2          18 YCPGKTLVVG-ASYVALECAGFLAGIGL-------DVTVMVRS   52 (122)
T ss_dssp             SCCCSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEEESS
T ss_pred             cCCCeEEEEC-CCccHHHHHHHHhhcCC-------eEEEEEec
Confidence            4578999999 69999999999998764       68888754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.46  E-value=0.061  Score=39.78  Aligned_cols=35  Identities=29%  Similarity=0.377  Sum_probs=30.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..++|+|+| +|++|.-+|..|...|.       ++++++..+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~-------~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGK-------KVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccce-------EEEEEEecC
Confidence            457999999 69999999999998764       899998864

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=93.43  E-value=0.082  Score=43.29  Aligned_cols=73  Identities=10%  Similarity=0.096  Sum_probs=41.7

Q ss_pred             CCcEEEEEcCCCchHH-HHHHHHHhcccCCCCCceEE-EEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC-
Q 020022            4 EPVRVLVTGAAGQIGY-ALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-   80 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~-~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~-   80 (332)
                      ++.||+||| +|.+|. +++..+...+      ..+| .++|+++  ++++.....+   .. -...+...++..+.++ 
T Consensus        32 ~~iriaiIG-~G~~~~~~~~~~~~~~~------~~~ivav~d~~~--~~a~~~~~~~---~i-~~~~~~~~~d~~ell~~   98 (221)
T d1h6da1          32 RRFGYAIVG-LGKYALNQILPGFAGCQ------HSRIEALVSGNA--EKAKIVAAEY---GV-DPRKIYDYSNFDKIAKD   98 (221)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHTTTCS------SEEEEEEECSCH--HHHHHHHHHT---TC-CGGGEECSSSGGGGGGC
T ss_pred             CCEEEEEEc-CcHHHHHHHHHHHHhCC------CceEEEEecCCH--HHHHHHHHhh---cc-ccccccccCchhhhccc
Confidence            346999999 699996 4555544321      2354 4899874  4443222211   11 1123444566666665 


Q ss_pred             -CCcEEEEeC
Q 020022           81 -GVNIAVMVG   89 (332)
Q Consensus        81 -~aDiVi~~a   89 (332)
                       +.|+|+++.
T Consensus        99 ~~iD~V~I~t  108 (221)
T d1h6da1          99 PKIDAVYIIL  108 (221)
T ss_dssp             TTCCEEEECS
T ss_pred             ccceeeeecc
Confidence             578898873

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.43  E-value=0.069  Score=39.20  Aligned_cols=37  Identities=30%  Similarity=0.302  Sum_probs=30.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +..|.||+||| +|++|.-+|..|...|.       +++++...+
T Consensus        19 ~~~p~~i~IiG-~G~ig~E~A~~l~~~G~-------~Vtiv~~~~   55 (119)
T d3lada2          19 QNVPGKLGVIG-AGVIGLELGSVWARLGA-------EVTVLEAMD   55 (119)
T ss_dssp             SSCCSEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESSS
T ss_pred             ccCCCeEEEEC-CChHHHHHHHHHHHcCC-------ceEEEEeec
Confidence            34578999999 69999999999998764       788888664

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.40  E-value=0.022  Score=47.04  Aligned_cols=35  Identities=26%  Similarity=0.274  Sum_probs=30.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA   47 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~   47 (332)
                      +++.|+||++.+|.+++..|+..|.       +|.+.|++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-------~V~i~~~~~~   36 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-------RVVVLDLRRE   36 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-------EEEEEESSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCcc
Confidence            4678999999999999999999874       7999999863

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.39  E-value=0.04  Score=44.88  Aligned_cols=42  Identities=17%  Similarity=0.375  Sum_probs=31.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +|.||+||| +|..|.+.|..|+..|.-......++++||..+
T Consensus         1 rp~~VaVIG-aGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           1 RPYYIAIVG-SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             CCcEEEEEC-cCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            367999999 699999999999987631111223799999864

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.29  E-value=0.073  Score=41.63  Aligned_cols=56  Identities=11%  Similarity=0.132  Sum_probs=42.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      .++|+|+|.+.-||..++.+|.+.+.       .+...+...                          .++.+-+++||+
T Consensus        37 GK~v~VIGrS~~VG~Pla~lL~~~ga-------tVt~~h~~t--------------------------~~l~~~~~~ADi   83 (166)
T d1b0aa1          37 GLNAVVIGASNIVGRPMSMELLLAGC-------TTTVTHRFT--------------------------KNLRHHVENADL   83 (166)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTTC-------EEEEECSSC--------------------------SCHHHHHHHCSE
T ss_pred             cceEEEEeccccccHHHHHHHHHhhc-------ccccccccc--------------------------chhHHHHhhhhH
Confidence            47999999877899999999988763       577776432                          134455688999


Q ss_pred             EEEeCCCCC
Q 020022           85 AVMVGGFPR   93 (332)
Q Consensus        85 Vi~~ag~~~   93 (332)
                      ||.++|.+.
T Consensus        84 vI~a~G~p~   92 (166)
T d1b0aa1          84 LIVAVGKPG   92 (166)
T ss_dssp             EEECSCCTT
T ss_pred             hhhhccCcc
Confidence            999988663

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.23  E-value=0.053  Score=36.85  Aligned_cols=34  Identities=21%  Similarity=0.164  Sum_probs=28.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +++|+|+| +|..|+.++......|+       +++.+|.++
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~-------~v~vldp~~   34 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGI-------AVWPVGLDA   34 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTE-------EEEEECTTS
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCC-------EEEEEcCCC
Confidence            36899999 69999999988777664       899999875

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=93.16  E-value=0.14  Score=39.65  Aligned_cols=129  Identities=12%  Similarity=0.071  Sum_probs=66.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC---hhhhcCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD---AVEACTG   81 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~---~~~al~~   81 (332)
                      ..+|+|+| +|.+|...+..+...|.       +++.+|.++  ++++ .+..+.  +.    .+..+.+   .....++
T Consensus        31 G~~VlI~G-aG~vG~~a~qlak~~Ga-------~~i~~~~~~--~~~~-~a~~lG--ad----~~i~~~~~~~~~~~~~~   93 (168)
T d1uufa2          31 GKKVGVVG-IGGLGHMGIKLAHAMGA-------HVVAFTTSE--AKRE-AAKALG--AD----EVVNSRNADEMAAHLKS   93 (168)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESSG--GGHH-HHHHHT--CS----EEEETTCHHHHHTTTTC
T ss_pred             CCEEEEec-cchHHHHHHHHhhcccc-------cchhhccch--hHHH-HHhccC--Cc----EEEECchhhHHHHhcCC
Confidence            36899999 59999998887777663       455787764  2322 222221  10    1111111   2234468


Q ss_pred             CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch-HHHHHHhCCCCCCCcEEE---ec
Q 020022           82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN-ALILKEFAPSIPAKNITC---LT  157 (332)
Q Consensus        82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~-~~~~~~~~~~~~~~~i~~---~t  157 (332)
                      .|++|.+.|.+.    +              +-..+.-.. +++++++++-|.+-. ........  +...++.|   ++
T Consensus        94 ~D~vid~~g~~~----~--------------~~~~~~~l~-~~G~iv~~G~~~~~~~~~~~~~l~--~k~~~i~Gs~~~~  152 (168)
T d1uufa2          94 FDFILNTVAAPH----N--------------LDDFTTLLK-RDGTMTLVGAPATPHKSPEVFNLI--MKRRAIAGSMIGG  152 (168)
T ss_dssp             EEEEEECCSSCC----C--------------HHHHHTTEE-EEEEEEECCCC-------CHHHHH--TTTCEEEECCSCC
T ss_pred             Cceeeeeeecch----h--------------HHHHHHHHh-cCCEEEEeccCCCCcccccHHHHH--HCCcEEEEEeecC
Confidence            999999987542    1              111222333 567888887654321 11111110  12223432   45


Q ss_pred             hHHHHHHHHHHHHH
Q 020022          158 RLDHNRALGQISEK  171 (332)
Q Consensus       158 ~lds~r~~~~la~~  171 (332)
                      .-|..++..+++++
T Consensus       153 ~~d~~e~l~l~a~~  166 (168)
T d1uufa2         153 IPETQEMLDFCAEH  166 (168)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc
Confidence            66767777777654

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.12  E-value=0.05  Score=43.38  Aligned_cols=35  Identities=17%  Similarity=0.217  Sum_probs=27.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |||+||| +|++|..+|..|...+-     ..+|.+++.++
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~-----~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHP-----DAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCT-----TSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCC-----CCeEEEEeCCC
Confidence            6999999 69999999999876532     12799998754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.12  E-value=0.077  Score=39.26  Aligned_cols=35  Identities=17%  Similarity=0.187  Sum_probs=30.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .|+||+|+| +|++|.-+|..|...|.       ++++++..+
T Consensus        21 ~pk~vvIvG-gG~iG~E~A~~l~~~G~-------~Vtlv~~~~   55 (125)
T d3grsa2          21 LPGRSVIVG-AGYIAVEMAGILSALGS-------KTSLMIRHD   55 (125)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSS
T ss_pred             cCCEEEEEc-CCccHHHHHHHHhcCCc-------EEEEEeecc
Confidence            468999999 69999999999998764       899999874

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=92.94  E-value=0.071  Score=41.95  Aligned_cols=35  Identities=20%  Similarity=0.208  Sum_probs=27.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..+|+|+| +|.+|...+..+...|. .     .|...|.++
T Consensus        28 g~~VlI~G-aG~vGl~~~q~ak~~Ga-~-----~Vi~~d~~~   62 (174)
T d1jqba2          28 GSSVVVIG-IGAVGLMGIAGAKLRGA-G-----RIIGVGSRP   62 (174)
T ss_dssp             TCCEEEEC-CSHHHHHHHHHHHTTTC-S-----CEEEECCCH
T ss_pred             CCEEEEEc-CCcchhhhhhhhhcccc-c-----ccccccchh
Confidence            35899999 59999988877776553 1     588999874

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.83  E-value=0.034  Score=46.98  Aligned_cols=33  Identities=21%  Similarity=0.313  Sum_probs=29.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .||+||| +|.+|.++|..|...|+       ++.++|..+
T Consensus         3 ~~V~IvG-aGp~Gl~~A~~L~~~G~-------~v~vlE~~~   35 (292)
T d1k0ia1           3 TQVAIIG-AGPSGLLLGQLLHKAGI-------DNVILERQT   35 (292)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHHTC-------CEEEECSSC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHCCC-------CEEEEeCCC
Confidence            4799999 69999999999999875       699999864

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=92.78  E-value=0.24  Score=39.61  Aligned_cols=111  Identities=14%  Similarity=0.204  Sum_probs=60.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH----Hhhhhc-CC----ccc----e--E
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME----LVDAAF-PL----LKG----V--V   70 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d----l~~~~~-~~----~~~----~--~   70 (332)
                      +||.||| .|..|..++..+...++.+    .+...+|.+.  +.|.....+    +..... .+    .+.    .  .
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~----v~~iainTD~--~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e   73 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHG----VEFVAVNTDL--QVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALE   73 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTT----EEEEEEESCH--HHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCc----eEEEEEcCCH--HHHhcCCcceEEecccccCCCcccccCchhhHhHHHH
Confidence            4899999 7999999999998876532    4777888763  222210000    000000 00    000    0  0


Q ss_pred             eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      ......+.+.++|+||++||..-..|       ..-.+++.++++.   +..  -.+-++|-|-.
T Consensus        74 ~~~~I~~~l~~~d~vfi~AGlGGgTG-------tgaapviA~~ake---~g~--lvv~ivtlPF~  126 (194)
T d1w5fa1          74 SEEKIREVLQDTHMVFITAGFGGGTG-------TGASPVIAKIAKE---MGI--LTVAIVTTPFY  126 (194)
T ss_dssp             THHHHHHHTTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHH---TTC--EEEEEEEECCG
T ss_pred             HHHHHHHHhcCCCeEEEEEecCCCcc-------cchHHHHHHHHHH---cCC--ceEEEEeechh
Confidence            01134677899999999998763211       2234545555543   332  24556676754

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=92.59  E-value=0.49  Score=38.48  Aligned_cols=101  Identities=19%  Similarity=0.252  Sum_probs=60.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc------hhhhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA------AEALNGVKMELVDAAFPLLKGVVATTDAVEA   78 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~------~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a   78 (332)
                      -.||.+.| +|..|..++..|...+. .     ++.++|.+.-      ...+.....++.+...    .-....++.++
T Consensus        26 d~riv~~G-AGsAg~gia~~l~~~~~-~-----~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~~----~~~~~~~l~~~   94 (222)
T d1vl6a1          26 EVKVVVNG-IGAAGYNIVKFLLDLGV-K-----NVVAVDRKGILNENDPETCLNEYHLEIARITN----PERLSGDLETA   94 (222)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHHTC-C-----EEEEEETTEECCTTSGGGCSSHHHHHHHHTSC----TTCCCSCHHHH
T ss_pred             hcEEEEEC-hHHHHHHHHHHHHHhcc-c-----ceEeecceeEEEcCcccccccHHHHHHHhhhc----chhhhcchHhh
Confidence            46999999 69999999999988764 2     7999998620      0111112222222111    11123467889


Q ss_pred             cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      ++++++++-+..    ++.-+.              +.+++.+ +..+|+-.|||..
T Consensus        95 l~g~~~~~g~~~----~~~~~~--------------e~m~~~~-~rPIIFpLSNPt~  132 (222)
T d1vl6a1          95 LEGADFFIGVSR----GNILKP--------------EWIKKMS-RKPVIFALANPVP  132 (222)
T ss_dssp             HTTCSEEEECSC----SSCSCH--------------HHHTTSC-SSCEEEECCSSSC
T ss_pred             ccCcceeccccc----cccccH--------------HHHhhcC-CCCEEEecCCCcc
Confidence            999998776642    222111              2345566 4566666799975

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.41  E-value=0.071  Score=41.04  Aligned_cols=35  Identities=17%  Similarity=0.244  Sum_probs=28.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +||.||| +|++|..+|..|...+-     ..+|+|+|.++
T Consensus         3 krivIvG-gG~~G~e~A~~l~~~~~-----~~~Vtlie~~~   37 (186)
T d1fcda1           3 RKVVVVG-GGTGGATAAKYIKLADP-----SIEVTLIEPNT   37 (186)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCT-----TSEEEEECSCS
T ss_pred             CcEEEEC-ccHHHHHHHHHHHHcCC-----CCcEEEEECCC
Confidence            6999999 69999999999987641     23899998764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.38  E-value=0.093  Score=39.30  Aligned_cols=35  Identities=26%  Similarity=0.448  Sum_probs=30.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .+.||+||| +|++|.-+|..|...|.       ++++++..+
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~-------~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANM-------HVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCc-------ceeeeeecc
Confidence            357999999 69999999999998764       899999864

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.24  E-value=0.12  Score=37.52  Aligned_cols=34  Identities=21%  Similarity=0.267  Sum_probs=29.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..||+|+| +|..|..++......|+       +++.+|.++
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~-------~v~v~d~~~   44 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGV-------EVIAVDRYA   44 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTC-------EEEEEESST
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCC-------EEEEEcCCC
Confidence            46999999 69999999998877664       799999875

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.20  E-value=0.096  Score=40.46  Aligned_cols=34  Identities=21%  Similarity=0.245  Sum_probs=27.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..+|.|+| +|.+|...+..+...|.       ++..+|.++
T Consensus        28 g~~VlV~G-aG~vG~~~~~~ak~~G~-------~Vi~~~~~~   61 (166)
T d1llua2          28 GQWVAISG-IGGLGHVAVQYARAMGL-------HVAAIDIDD   61 (166)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEEESCH
T ss_pred             CCEEEEee-ccccHHHHHHHHHHcCC-------ccceecchh
Confidence            36899999 59999998887777652       788999874

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.15  E-value=0.3  Score=37.73  Aligned_cols=77  Identities=10%  Similarity=-0.004  Sum_probs=47.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh-hhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV-DAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~-~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      +..||+++|-...|..+++..+..-|+       ++.++-...-  .......+.. .........+..+.+..+|+++|
T Consensus         3 ~gl~Ia~VGD~~nv~~Sli~~l~~~g~-------~v~~~~P~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~a   73 (163)
T d1pvva2           3 KGVKVVYVGDGNNVAHSLMIAGTKLGA-------DVVVATPEGY--EPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDA   73 (163)
T ss_dssp             TTCEEEEESCCCHHHHHHHHHHHHTTC-------EEEEECCTTC--CCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-------eEEEeccccc--CCChHHHHHHHHhhhcccceEEEecCHHHHhhhc
Confidence            457999999766777777777666543       7888865321  1111111111 11111223567788899999999


Q ss_pred             cEEEEeC
Q 020022           83 NIAVMVG   89 (332)
Q Consensus        83 DiVi~~a   89 (332)
                      |+|+.+-
T Consensus        74 dviy~~~   80 (163)
T d1pvva2          74 DVIYTDV   80 (163)
T ss_dssp             SEEEECC
T ss_pred             cEEeecc
Confidence            9988763

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.99  E-value=0.088  Score=42.80  Aligned_cols=35  Identities=11%  Similarity=0.230  Sum_probs=28.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .||+||| +|..|.+.|..|...+. +    .+|.+||..+
T Consensus         2 ~kv~iIG-aGpaGl~aA~~L~~~~~-~----~~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVG-SGPAGFYTAQHLLKHHS-R----AHVDIYEKQL   36 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCS-S----CEEEEECSSS
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhcCC-C----CeEEEEeCCC
Confidence            5999999 69999999999887542 1    1899999764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.98  E-value=0.057  Score=45.02  Aligned_cols=31  Identities=23%  Similarity=0.327  Sum_probs=27.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      .|+||| +|.+|.++|+.|++.|.       +|.++|.+
T Consensus         6 DvvIIG-aGi~Gls~A~~La~~G~-------~V~vlE~~   36 (276)
T d1ryia1           6 EAVVIG-GGIIGSAIAYYLAKENK-------NTALFESG   36 (276)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCC-------cEEEEeCC
Confidence            499999 69999999999999874       69999976

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.97  E-value=0.1  Score=42.75  Aligned_cols=35  Identities=23%  Similarity=0.359  Sum_probs=30.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..+||+||| +|..|.+.|..|...|.       ++.+++..+
T Consensus        48 ~~k~VvIIG-aGpAGl~aA~~l~~~G~-------~v~l~E~~~   82 (233)
T d1djqa3          48 NKDSVLIVG-AGPSGSEAARVLMESGY-------TVHLTDTAE   82 (233)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSS
T ss_pred             CCceEEEEc-ccHHHHHHHHHHHHhcc-------ceeeEeecc
Confidence            458999999 69999999999998874       799999764

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=91.93  E-value=0.088  Score=41.45  Aligned_cols=34  Identities=21%  Similarity=0.219  Sum_probs=27.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .+|.|+| +|.+|...+..+...|. .     .|...|.++
T Consensus        30 ~~VlV~G-aG~iG~~~~~~ak~~Ga-~-----~Vi~~~~~~   63 (182)
T d1vj0a2          30 KTVVIQG-AGPLGLFGVVIARSLGA-E-----NVIVIAGSP   63 (182)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTB-S-----EEEEEESCH
T ss_pred             CEEEEEC-CCccchhheeccccccc-c-----ccccccccc
Confidence            6899999 59999998888877663 2     689999874

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.85  E-value=0.088  Score=44.24  Aligned_cols=35  Identities=23%  Similarity=0.319  Sum_probs=29.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      .+..||+||| +|.-|.+.|..|...|.       +|.++...
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~~G~-------~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQSFGM-------DVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHHTTC-------EEEEECSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhCCC-------CEEEEeCC
Confidence            3567999999 69999999999999874       78999764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.78  E-value=0.14  Score=37.90  Aligned_cols=36  Identities=19%  Similarity=0.342  Sum_probs=30.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..|.+++|+| +|.+|.-+|..+...|.       ++++++..+
T Consensus        24 ~~p~~vvIiG-gG~IG~E~A~~~~~~G~-------~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIG-GGIIGLEMGTVYSTLGS-------RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEES-CSHHHHHHHHHHHHHTC-------EEEEECSSS
T ss_pred             ccCCeEEEEC-CCHHHHHHHHHhhcCCC-------EEEEEEeec
Confidence            3578999999 69999999999988774       899998764

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=91.46  E-value=0.15  Score=39.05  Aligned_cols=48  Identities=25%  Similarity=0.354  Sum_probs=32.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM   56 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~   56 (332)
                      .|++|+|.|++|+||.....-+.+..     +.++|..+--+.+-+.+..++.
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~-----d~f~v~~lsa~~N~~~L~~q~~   48 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNL-----DRYQVIALTANRNVKDLADAAK   48 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTG-----GGEEEEEEEESSCHHHHHHHHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCC-----CCcEEEEEEeCCCHHHHHHHHH
Confidence            36899999999999999777766532     2346666655554444544433

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.16  E-value=0.089  Score=42.38  Aligned_cols=33  Identities=27%  Similarity=0.389  Sum_probs=28.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      .||+||| +|..|.+.|..|.+.|+.      +|++++..
T Consensus         1 P~V~IIG-aG~aGL~aA~~L~~~G~~------~V~vlE~~   33 (347)
T d1b5qa1           1 PRVIVVG-AGMSGISAAKRLSEAGIT------DLLILEAT   33 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHHTTCC------CEEEECSS
T ss_pred             CCEEEEC-CcHHHHHHHHHHHhCCCC------cEEEEECC
Confidence            3799999 699999999999998742      58999875

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.13  E-value=0.12  Score=37.96  Aligned_cols=36  Identities=22%  Similarity=0.374  Sum_probs=30.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..|.+++||| +|.+|.-+|..+...|.       +++++.+.+
T Consensus        23 ~~p~~~viiG-~G~iglE~A~~~~~~G~-------~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIG-AGYIGLEMGSVWGRIGS-------EVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESC-CSHHHHHHHHHHHHHTC-------EEEEECSSS
T ss_pred             ccCCeEEEEc-cchHHHHHHHHHHhcCC-------eEEEEEEcc
Confidence            3578999999 69999999999998774       899998764

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.10  E-value=0.17  Score=36.76  Aligned_cols=34  Identities=15%  Similarity=-0.000  Sum_probs=29.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +++|+|+| +|.+|.-+|..|...+.       ++.+++..+
T Consensus        22 ~~~vvVvG-gG~ig~E~A~~l~~~g~-------~vt~i~~~~   55 (121)
T d1mo9a2          22 GSTVVVVG-GSKTAVEYGCFFNATGR-------RTVMLVRTE   55 (121)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcch-------hheEeeccc
Confidence            57999999 69999999999987763       799998864

>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]

Probab=90.85  E-value=0.52  Score=35.83  Aligned_cols=70  Identities=17%  Similarity=0.108  Sum_probs=42.0

Q ss_pred             CcEEEEEcCCCc--hHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGAAGQ--IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa~G~--vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      ..||+++|=..+  |..+++..+...|.       ++.++-..+   ..... .++.   .....++..+++..+++++|
T Consensus         3 gl~i~~vGD~~~sRv~~Sl~~~l~~~g~-------~~~~~~p~~---~~~~~-~~~~---~~~~~~~~~~~d~~eai~~a   68 (153)
T d1pg5a2           3 GLVFALLGDLKYARTVNSLLRILTRFRP-------KLVYLISPQ---LLRAR-KEIL---DELNYPVKEVENPFEVINEV   68 (153)
T ss_dssp             TCEEEEEECCSSCHHHHHHHHHGGGSCC-------SEEEEECCG---GGCCC-HHHH---TTCCSCEEEESCGGGTGGGC
T ss_pred             CCEEEEECCCCccHHHHHHHHHHHHcCC-------eeEEEeccc---ccccc-hhhc---ccCCCeEEEEeCHHHHhhcC
Confidence            469999994323  77777777765442       344433221   11111 1111   12234677888999999999


Q ss_pred             cEEEEe
Q 020022           83 NIAVMV   88 (332)
Q Consensus        83 DiVi~~   88 (332)
                      |+|..+
T Consensus        69 Dvvy~~   74 (153)
T d1pg5a2          69 DVLYVT   74 (153)
T ss_dssp             SEEEEE
T ss_pred             CeEEEe
Confidence            998876

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.83  E-value=0.2  Score=38.42  Aligned_cols=34  Identities=21%  Similarity=0.174  Sum_probs=26.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..+|+|.| +|.+|...+..+...+.       ++...|.++
T Consensus        28 g~~vlv~G-~G~iG~~a~~~a~~~g~-------~v~~~~~~~   61 (168)
T d1rjwa2          28 GEWVAIYG-IGGLGHVAVQYAKAMGL-------NVVAVDIGD   61 (168)
T ss_dssp             TCEEEEEC-CSTTHHHHHHHHHHTTC-------EEEEECSCH
T ss_pred             CCEEEEee-cccchhhhhHHHhcCCC-------eEeccCCCH
Confidence            36899998 69999988777776553       788888764

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.79  E-value=0.061  Score=43.69  Aligned_cols=24  Identities=38%  Similarity=0.499  Sum_probs=21.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhccc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVM   30 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~   30 (332)
                      |||+||| +|-+|.+.|+.|++.|.
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~   24 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYH   24 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCC
Confidence            6999999 69999999999998773

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.78  E-value=0.15  Score=37.45  Aligned_cols=34  Identities=18%  Similarity=0.296  Sum_probs=29.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      +++|+|+| +|++|.-+|..|...|.       +++|++..+
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~-------~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGY-------HVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTC-------EEEEECSSS
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccc-------eEEEEeccc
Confidence            36899999 69999999999998764       799999864

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.22  E-value=0.28  Score=35.46  Aligned_cols=39  Identities=18%  Similarity=0.140  Sum_probs=29.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..|.+|+|+| +|++|.-+|..|...+..+    .+++|++..+
T Consensus        18 ~~p~~v~ivG-gG~ig~E~A~~l~~l~~~~----~~Vtli~~~~   56 (117)
T d1aoga2          18 EPPRRVLTVG-GGFISVEFAGIFNAYKPKD----GQVTLCYRGE   56 (117)
T ss_dssp             SCCSEEEEEC-SSHHHHHHHHHHHHHCCTT----CEEEEEESSS
T ss_pred             hcCCeEEEEC-CcHHHHHHHHHhhhcccCC----cEEEEEeccc
Confidence            3468999999 6999999998776544221    2789998764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=90.16  E-value=0.25  Score=38.45  Aligned_cols=34  Identities=21%  Similarity=0.240  Sum_probs=26.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .+|+|+| +|.+|...+..+...+. .     .+...|.++
T Consensus        30 ~~VlI~G-~G~iG~~~~~~ak~~g~-~-----~v~~~~~~~   63 (174)
T d1f8fa2          30 SSFVTWG-AGAVGLSALLAAKVCGA-S-----IIIAVDIVE   63 (174)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHHTC-S-----EEEEEESCH
T ss_pred             CEEEEeC-CCHHHhhhhhccccccc-c-----eeeeeccHH
Confidence            5899999 59999998888776653 1     577888764

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.15  E-value=0.28  Score=37.53  Aligned_cols=49  Identities=12%  Similarity=0.190  Sum_probs=32.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHH
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL   58 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl   58 (332)
                      |+||+|.|++|++|.....-+.+..     +.+++..+--+.+-+.+..++.++
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~-----d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNP-----EHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCT-----TTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCC-----CCcEEEEEEecCcHHHHHHHHHHH
Confidence            3589999999999999877776532     234666665555445555454443

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=90.13  E-value=0.15  Score=39.41  Aligned_cols=36  Identities=22%  Similarity=0.258  Sum_probs=28.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..+|.|+||+|.+|...+..+...+..      ++...|.++
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~------~V~~~~~~~   63 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGA------TIIGVDVRE   63 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCC------EEEEEESSH
T ss_pred             CCEEEEEeccccceeeeeecccccccc------cccccccch
Confidence            358999998799999888877766531      689999874

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.06  E-value=0.1  Score=47.24  Aligned_cols=34  Identities=32%  Similarity=0.569  Sum_probs=29.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .||+|+| +|.+|+.++..|+..|+ +     +|+|+|-+.
T Consensus        38 ~kVlvvG-~GglG~ei~k~L~~~Gv-g-----~i~lvD~D~   71 (426)
T d1yovb1          38 CKVLVIG-AGGLGCELLKNLALSGF-R-----QIHVIDMDT   71 (426)
T ss_dssp             CCEEEEC-SSTTHHHHHHHHHTTTC-C-----CEEEECCCB
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEEECCC
Confidence            5899999 69999999999999885 4     799999763

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.03  E-value=0.2  Score=40.55  Aligned_cols=37  Identities=14%  Similarity=0.226  Sum_probs=29.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ...||.||| .|.-|..++..+...++-+    .+...+|.+
T Consensus        14 ~~~ki~ViG-vGGaG~n~v~~l~~~~~~~----v~~iainTD   50 (209)
T d2vapa1          14 TKAKITVVG-CGGAGNNTITRLKMEGIEG----AKTVAINTD   50 (209)
T ss_dssp             TCCCEEEEE-EHHHHHHHHHHHHHHTCTT----EEEEEEESB
T ss_pred             cCCcEEEEE-eCChHHHHHHHHHHcCCCc----eEEEEEeCC
Confidence            346999999 7999999999998876532    367777776

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=89.85  E-value=0.32  Score=35.10  Aligned_cols=38  Identities=18%  Similarity=0.200  Sum_probs=28.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .|.||+|+| +|++|.-+|..|....-.+    .+++++...+
T Consensus        17 ~p~~v~IiG-gG~ig~E~A~~l~~~~~~g----~~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVG-GGYISIEFAGIFNAYKARG----GQVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEEC-SSHHHHHHHHHHHHHSCTT----CEEEEEESSS
T ss_pred             cCCeEEEEC-CChHHHHHHHHhHhhcccc----cccceecccc
Confidence            478999999 6999999997766532111    2789998764

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.72  E-value=0.14  Score=43.17  Aligned_cols=34  Identities=26%  Similarity=0.407  Sum_probs=28.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .+|+||| +|-+|.++|+.|+..|..      +|+|+|.++
T Consensus         2 ~dViIIG-aGi~G~s~A~~La~~G~~------~V~liE~~~   35 (305)
T d1pj5a2           2 PRIVIIG-AGIVGTNLADELVTRGWN------NITVLDQGP   35 (305)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCC------CEEEECSSC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHcCCC------cEEEEeCCC
Confidence            3799999 699999999999987641      599999763

>d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: Dhaf3308-like
family: Dhaf3308-like
domain: Hypothetical protein Dhaf 3308
species: Desulfitobacterium hafniense [TaxId: 49338]

Probab=89.68  E-value=0.24  Score=41.30  Aligned_cols=115  Identities=14%  Similarity=0.141  Sum_probs=68.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI   84 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi   84 (332)
                      ..||++||- -    .++..+...+.       ++..+|+++.    .   .|+.+            ...++.+..||+
T Consensus       122 g~kV~vIG~-~----P~v~~l~~~~~-------~~~VlE~~p~----~---gd~p~------------~~~~~lLp~aD~  170 (251)
T d2h1qa1         122 GKKVGVVGH-F----PHLESLLEPIC-------DLSILEWSPE----E---GDYPL------------PASEFILPECDY  170 (251)
T ss_dssp             TSEEEEESC-C----TTHHHHHTTTS-------EEEEEESSCC----T---TCEEG------------GGHHHHGGGCSE
T ss_pred             CCEEEEEec-c----hhHHHHHhcCC-------cEEEEeCCCC----C---CCCCc------------hHHHHhhhcCCE
Confidence            479999994 1    34555555432       7899998752    1   12211            235678899999


Q ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHHH
Q 020022           85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRA  164 (332)
Q Consensus        85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~  164 (332)
                      ||+|+.                 .++-.-.+.|-++|.+...++++. |...+...+.++  |+  +.++|.-..|..++
T Consensus       171 viiTGs-----------------TlvN~Tl~~LL~~~~~a~~vvl~G-PS~p~~P~lf~~--Gv--~~lag~~v~d~~~~  228 (251)
T d2h1qa1         171 VYITCA-----------------SVVDKTLPRLLELSRNARRITLVG-PGTPLAPVLFEH--GL--QELSGFMVKDNARA  228 (251)
T ss_dssp             EEEETH-----------------HHHHTCHHHHHHHTTTSSEEEEES-TTCCCCGGGGGT--TC--SEEEEEEESCHHHH
T ss_pred             EEEEec-----------------hhhcCCHHHHHHhCCcCCEEEEEC-CCcccCHHHHhc--CC--ceEeEEEEeCHHHH
Confidence            999952                 222244455556664433454555 655444433232  33  45777777898899


Q ss_pred             HHHHHHHc
Q 020022          165 LGQISEKL  172 (332)
Q Consensus       165 ~~~la~~l  172 (332)
                      .+.+++--
T Consensus       229 ~~~i~~Gg  236 (251)
T d2h1qa1         229 FRIVAGAE  236 (251)
T ss_dssp             HHHHTTSS
T ss_pred             HHHHHcCC
Confidence            88887543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.10  E-value=0.6  Score=36.12  Aligned_cols=33  Identities=24%  Similarity=0.199  Sum_probs=25.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      .+|.|+||+|.+|...+..+...+.       ++...+.+
T Consensus        27 ~~VlI~ga~g~vG~~~iqla~~~g~-------~vi~~~~~   59 (183)
T d1pqwa_          27 ERVLIHSATGGVGMAAVSIAKMIGA-------RIYTTAGS   59 (183)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTC-------EEEEEESS
T ss_pred             CEEEEECCCCCcccccchhhccccc-------cceeeecc
Confidence            6899999889999998888777653       45555544

>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.04  E-value=0.42  Score=36.98  Aligned_cols=80  Identities=18%  Similarity=0.104  Sum_probs=43.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      +..||+++|= +   +.+++.++.. ..++    .++.++-.... ........+..........++..+.+..++++++
T Consensus         3 ~gl~I~~vGD-~---~nV~~Sli~~~~~~g----~~~~~~~P~~~-~p~~~~~~~~~~~~~~~~~~i~~~~d~~~~~~~a   73 (170)
T d1otha2           3 KGLTLSWIGD-G---NNILHSIMMSAAKFG----MHLQAATPKGY-EPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGG   73 (170)
T ss_dssp             TTCEEEEESC-S---SHHHHHHHTTTGGGT----CEEEEECCTTC-CCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTC
T ss_pred             CCCEEEEEcC-c---hhHHHHHHHHHHHcC----CEEEEEecccc-CCchHHHHHHHHHHhccCCEEEEEcCHHHHHhhh
Confidence            4579999995 3   3455554431 1122    26777765321 1011111111111111234677888999999999


Q ss_pred             cEEEEeCCCC
Q 020022           83 NIAVMVGGFP   92 (332)
Q Consensus        83 DiVi~~ag~~   92 (332)
                      |+|+...-..
T Consensus        74 dvi~~~~~~~   83 (170)
T d1otha2          74 NVLITDTWIS   83 (170)
T ss_dssp             SEEEECCSSC
T ss_pred             hheeeeceec
Confidence            9998875433

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.92  E-value=0.55  Score=37.50  Aligned_cols=105  Identities=20%  Similarity=0.217  Sum_probs=60.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccc-e--------------
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKG-V--------------   69 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~-~--------------   69 (332)
                      +|-||| -|..|..++..+...++.    ..++..+|.+.  ..+.     ......  ....+ .              
T Consensus         3 ~IkViG-vGGaG~n~vn~~~~~~~~----~v~~iainTD~--~~L~-----~~~~~~ki~iG~~~t~G~Gagg~p~~g~~   70 (198)
T d1rq2a1           3 VIKVVG-IGGGGVNAVNRMIEQGLK----GVEFIAINTDA--QALL-----MSDADVKLDVGRDSTRGLGAGADPEVGRK   70 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCC----SEEEEEEESCH--HHHH-----HCCCSEEEECCTTTC-----CCCHHHHHH
T ss_pred             eEEEEE-eCchHHHHHHHHHHcCCC----CceEEEEcchH--HHHh-----cCCcchhhccccccccCCCcCcChhhhHh
Confidence            678899 899999999999887652    23677777652  2221     111100  00000 0              


Q ss_pred             ---EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           70 ---VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        70 ---~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                         .......++++++|+||++||..-..|       ..-.|++.++++..   . . -.+-++|-|-.
T Consensus        71 aa~e~~~~I~~~l~~~d~vfi~AGlGGgTG-------tGaaPviA~iake~---g-~-l~v~ivt~PF~  127 (198)
T d1rq2a1          71 AAEDAKDEIEELLRGADMVFVTAGEGGGTG-------TGGAPVVASIARKL---G-A-LTVGVVTRPFS  127 (198)
T ss_dssp             HHHHTHHHHHHHHTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHHH---T-C-EEEEEEEECCG
T ss_pred             hHHHHHHHHHHHhcCCCEEEEEEecCCCCC-------cchHHHHHHHHHHc---C-C-cEEEEEecChH
Confidence               001134678999999999999763222       23356666666653   2 1 23566777754

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.44  E-value=0.42  Score=36.79  Aligned_cols=72  Identities=13%  Similarity=-0.008  Sum_probs=43.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee--CChh-hhcCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT--TDAV-EACTG   81 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~--~~~~-~al~~   81 (332)
                      ..+|.|+| +|.+|...+..+...|.       ++..+|.++  ++++ .+.++.  +..   -+...  .+.. +...+
T Consensus        28 g~~vlI~G-aG~vG~~a~q~ak~~G~-------~vi~~~~~~--~k~~-~a~~lG--a~~---~i~~~~~~~~~~~~~~~   91 (168)
T d1piwa2          28 GKKVGIVG-LGGIGSMGTLISKAMGA-------ETYVISRSS--RKRE-DAMKMG--ADH---YIATLEEGDWGEKYFDT   91 (168)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHHTC-------EEEEEESSS--TTHH-HHHHHT--CSE---EEEGGGTSCHHHHSCSC
T ss_pred             CCEEEEEC-CCCcchhHHHHhhhccc-------cccccccch--hHHH-HhhccC--CcE---EeeccchHHHHHhhhcc
Confidence            46899999 59999998877766663       678899875  3443 233331  100   01111  1222 33456


Q ss_pred             CcEEEEeCCCC
Q 020022           82 VNIAVMVGGFP   92 (332)
Q Consensus        82 aDiVi~~ag~~   92 (332)
                      .|+|+.+.|..
T Consensus        92 ~d~vi~~~~~~  102 (168)
T d1piwa2          92 FDLIVVCASSL  102 (168)
T ss_dssp             EEEEEECCSCS
T ss_pred             cceEEEEecCC
Confidence            89999987654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=88.35  E-value=0.84  Score=36.44  Aligned_cols=34  Identities=29%  Similarity=0.387  Sum_probs=29.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .++|+|-| .|.||+.++..|...|.       .|+.+|.+.
T Consensus        27 gk~v~IqG-~G~VG~~~A~~L~~~Ga-------kvvv~d~d~   60 (201)
T d1c1da1          27 GLTVLVQG-LGAVGGSLASLAAEAGA-------QLLVADTDT   60 (201)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEecchH
Confidence            47999999 89999999999999874       789999874

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.04  E-value=0.21  Score=39.76  Aligned_cols=32  Identities=19%  Similarity=0.207  Sum_probs=27.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      -|+||| +|..|.+.|..|+..|.       +|.+++.++
T Consensus         7 DviViG-aG~~Gl~~A~~La~~G~-------~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLG-TGITECILSGLLSVDGK-------KVLHIDKQD   38 (297)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCC-------CEEEEcCCC
Confidence            489999 69999999999999874       699999864

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.82  E-value=0.76  Score=34.52  Aligned_cols=34  Identities=18%  Similarity=0.314  Sum_probs=28.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      +.++|.||| +|.+|..-+..|+..|.       +|++++..
T Consensus        12 ~gkrvLViG-gG~va~~ka~~Ll~~GA-------~VtVvap~   45 (150)
T d1kyqa1          12 KDKRILLIG-GGEVGLTRLYKLMPTGC-------KLTLVSPD   45 (150)
T ss_dssp             TTCEEEEEE-ESHHHHHHHHHHGGGTC-------EEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCC
Confidence            357999999 59999999999998774       78888643

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.26  E-value=0.26  Score=37.49  Aligned_cols=30  Identities=20%  Similarity=0.434  Sum_probs=24.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ||+||| +|++|..+|..|...   .     ++++++..
T Consensus         2 rVvIIG-gG~~G~e~A~~l~~~---~-----~Vtvv~~~   31 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLSQT---Y-----EVTVIDKE   31 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTT---S-----EEEEECSS
T ss_pred             eEEEEC-CcHHHHHHHHHHHcC---C-----CEEEEecc
Confidence            899999 699999999888642   1     78899864

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=87.23  E-value=1.9  Score=33.18  Aligned_cols=34  Identities=18%  Similarity=0.144  Sum_probs=27.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .+|+|+| +|.+|...+..+...|. .     .|...|.++
T Consensus        30 ~~VlV~G-~G~iGl~a~~~ak~~Ga-~-----~Vi~~d~~~   63 (174)
T d1e3ia2          30 STCAVFG-LGCVGLSAIIGCKIAGA-S-----RIIAIDING   63 (174)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-S-----EEEEECSCG
T ss_pred             CEEEEEC-CChHHHHHHHHHHHhCC-c-----eeeeeccch
Confidence            6899999 69999998888877653 2     688999874

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.01  E-value=0.23  Score=42.19  Aligned_cols=40  Identities=10%  Similarity=0.182  Sum_probs=31.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM   56 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~   56 (332)
                      .+|+||| +|..|.++|..|++.|.       +|.+++.++   ..-|.+.
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g~-------~V~iiEk~~---~iGG~~~   41 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLNK-------KVLVIEKRN---HIGGNAY   41 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGTC-------CEEEECSSS---SSSGGGC
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCCC-------cEEEEECCC---CcccceE
Confidence            4799999 69999999999988763       689998763   3444443

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.93  E-value=0.31  Score=39.59  Aligned_cols=31  Identities=26%  Similarity=0.223  Sum_probs=27.4

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      |+||| +|..|...|..|++.|.       ++.|+|.++
T Consensus         5 ViIIG-aG~aGl~aA~~la~~G~-------~V~liEk~~   35 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEEGA-------NVLLLDKGN   35 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCC-------cEEEEeCCC
Confidence            99999 69999999999999875       699999764

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.81  E-value=0.25  Score=40.98  Aligned_cols=31  Identities=29%  Similarity=0.350  Sum_probs=27.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      -|+||| +|.+|.++|+.|+..|.       +++|+|..
T Consensus         5 DvvIIG-aGi~Gls~A~~La~~G~-------~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVG-AGSMGMAAGYQLAKQGV-------KTLLVDAF   35 (281)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCC-------cEEEEeCC
Confidence            389999 69999999999999874       68999875

>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Bacillus subtilis [TaxId: 1423]

Probab=86.28  E-value=1.1  Score=33.80  Aligned_cols=62  Identities=10%  Similarity=0.075  Sum_probs=41.8

Q ss_pred             CcEEEEEcC--CCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022            5 PVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV   82 (332)
Q Consensus         5 ~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a   82 (332)
                      .+||+++|=  .|.|..+++..+..-|.       ++++....+    +.   .+        ...+....+..++++++
T Consensus         3 gl~i~~vGD~~~srv~~Sl~~~~~~~g~-------~~~i~~P~~----~~---~~--------~~~~~~~~~~~ea~~~a   60 (151)
T d2at2a2           3 GLTVSIHGDIKHSRVARSNAEVLTRLGA-------RVLFSGPSE----WQ---DE--------ENTFGTYVSMDEAVESS   60 (151)
T ss_pred             CCEEEEEcCCCCCHHHHHHHHHHHHcCC-------cccccCCch----hh---cc--------ccceeEEEechhccccC
Confidence            469999995  35688888888876543       677775431    11   00        11344566788999999


Q ss_pred             cEEEEe
Q 020022           83 NIAVMV   88 (332)
Q Consensus        83 DiVi~~   88 (332)
                      |+|..+
T Consensus        61 Dviy~~   66 (151)
T d2at2a2          61 DVVMLL   66 (151)
T ss_pred             ceeeee
Confidence            999876

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.02  E-value=0.43  Score=35.70  Aligned_cols=23  Identities=39%  Similarity=0.547  Sum_probs=20.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcc
Q 020022            7 RVLVTGAAGQIGYALVPMIARGV   29 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~   29 (332)
                      ||+|+||+|.||+.++..+....
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~   23 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAAD   23 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHST
T ss_pred             CEEEECCCCHHHHHHHHHHHhCC
Confidence            89999999999999998877643

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=85.91  E-value=0.45  Score=38.96  Aligned_cols=72  Identities=13%  Similarity=0.087  Sum_probs=37.6

Q ss_pred             CCCcEEEEEcCCCch----HHHHHHHHHhcccCCCCCceEEE-EEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh
Q 020022            3 KEPVRVLVTGAAGQI----GYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE   77 (332)
Q Consensus         3 ~~~~kI~IiGa~G~v----G~~la~~l~~~~~~~~~~~~ei~-L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~   77 (332)
                      .+++||+||| .|.+    +......+....   +  ..+|+ ++|++.  ++++.....+   .   ........+..+
T Consensus        14 ~k~irvgiIG-~G~~~~~~~~~h~~ai~~~~---~--~~~ivav~d~~~--~~~~~~~~~~---~---~~~~~~~~~~~~   79 (237)
T d2nvwa1          14 SRPIRVGFVG-LTSGKSWVAKTHFLAIQQLS---S--QFQIVALYNPTL--KSSLQTIEQL---Q---LKHATGFDSLES   79 (237)
T ss_dssp             GCCEEEEEEC-CCSTTSHHHHTHHHHHHHTT---T--TEEEEEEECSCH--HHHHHHHHHT---T---CTTCEEESCHHH
T ss_pred             CCCeEEEEEe-cCccccHHHHHHHHHHHhcC---C--CeEEEEEEcCCH--HHHHHHHHhc---c---cccceeecchhh
Confidence            3568999999 5764    333344444321   1  12544 888873  3333221111   1   112334556666


Q ss_pred             hcC--CCcEEEEe
Q 020022           78 ACT--GVNIAVMV   88 (332)
Q Consensus        78 al~--~aDiVi~~   88 (332)
                      .++  +.|+|+++
T Consensus        80 l~~~~~iD~V~i~   92 (237)
T d2nvwa1          80 FAQYKDIDMIVVS   92 (237)
T ss_dssp             HHHCTTCSEEEEC
T ss_pred             cccccccceeecc
Confidence            664  57788887

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=85.84  E-value=0.32  Score=37.70  Aligned_cols=70  Identities=26%  Similarity=0.341  Sum_probs=41.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC---hhhhcCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD---AVEACTG   81 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~---~~~al~~   81 (332)
                      ..+|.|.||+|.+|+..+..+...|.       ++...+.++  ++++ ...++  .+ .   .+..+.+   ....-++
T Consensus        28 g~~VlI~ga~G~vG~~aiqlak~~G~-------~vi~~~~~~--~~~~-~~~~l--Ga-~---~~i~~~~~~~~~~~~~g   91 (171)
T d1iz0a2          28 GEKVLVQAAAGALGTAAVQVARAMGL-------RVLAAASRP--EKLA-LPLAL--GA-E---EAATYAEVPERAKAWGG   91 (171)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTC-------EEEEEESSG--GGSH-HHHHT--TC-S---EEEEGGGHHHHHHHTTS
T ss_pred             CCEEEEEeccccchhhhhhhhccccc-------ccccccccc--cccc-ccccc--cc-c---eeeehhhhhhhhhcccc
Confidence            46899999889999998888777664       566666653  3332 11211  11 0   1111122   2234578


Q ss_pred             CcEEEEeCC
Q 020022           82 VNIAVMVGG   90 (332)
Q Consensus        82 aDiVi~~ag   90 (332)
                      +|+|+-+.|
T Consensus        92 ~D~v~d~~G  100 (171)
T d1iz0a2          92 LDLVLEVRG  100 (171)
T ss_dssp             EEEEEECSC
T ss_pred             ccccccccc
Confidence            999998765

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=85.66  E-value=0.43  Score=34.96  Aligned_cols=92  Identities=8%  Similarity=0.086  Sum_probs=51.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-C----hhhhcC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-D----AVEACT   80 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-~----~~~al~   80 (332)
                      ++|.|+| .|.+|..++..|...         ++.++|.++  ++.+    .+......   -+.+.. +    ....+.
T Consensus         1 kHivI~G-~g~~g~~l~~~L~~~---------~i~vi~~d~--~~~~----~~~~~~~~---~i~Gd~~~~~~L~~a~i~   61 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELRGS---------EVFVLAEDE--NVRK----KVLRSGAN---FVHGDPTRVSDLEKANVR   61 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSCGG---------GEEEEESCT--THHH----HHHHTTCE---EEESCTTSHHHHHHTTCT
T ss_pred             CEEEEEC-CCHHHHHHHHHHcCC---------CCEEEEcch--HHHH----HHHhcCcc---ccccccCCHHHHHHhhhh
Confidence            3688999 699999999887432         467788875  3322    12211111   111111 1    124467


Q ss_pred             CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022           81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN  132 (332)
Q Consensus        81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN  132 (332)
                      .|+.+|++..-      +     ..|+.    ++..+++.. |+..++..++
T Consensus        62 ~A~~vi~~~~~------d-----~~n~~----~~~~~r~~~-~~~~iia~~~   97 (129)
T d2fy8a1          62 GARAVIVNLES------D-----SETIH----CILGIRKID-ESVRIIAEAE   97 (129)
T ss_dssp             TCSEEEECCSS------H-----HHHHH----HHHHHHHHC-SSSCEEEECS
T ss_pred             cCcEEEEeccc------h-----hhhHH----HHHHHHHHC-CCceEEEEEc
Confidence            89999987321      1     23443    344566776 5666666554

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.37  E-value=0.16  Score=40.05  Aligned_cols=37  Identities=14%  Similarity=0.166  Sum_probs=29.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      |+-...+|+||| +|..|...|..+++.++       ++.++|..
T Consensus         1 m~~~~~~VvIIG-gGpaGl~aA~~~ar~g~-------~v~vie~~   37 (192)
T d1vdca1           1 LETHNTRLCIVG-SGPAAHTAAIYAARAEL-------KPLLFEGW   37 (192)
T ss_dssp             CEEEEEEEEEEC-CSHHHHHHHHHHHHTTC-------CCEEECCS
T ss_pred             CCcccceEEEEC-CCHHHHHHHHHHHHcCC-------cEEEEEee
Confidence            444457999999 69999999999998775       56788754

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.24  E-value=1.6  Score=34.63  Aligned_cols=110  Identities=18%  Similarity=0.169  Sum_probs=60.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH--------HHHhhhhcC-Cccce------Ee
Q 020022            7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK--------MELVDAAFP-LLKGV------VA   71 (332)
Q Consensus         7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~--------~dl~~~~~~-~~~~~------~~   71 (332)
                      +|.||| .|..|..++..+...++.    ..++..+|.+.  +.|....        .++....-. ..+.+      ..
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~----~v~~iainTD~--~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~   75 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVE----GVEFICANTDA--QALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALED   75 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCC----SEEEEEEESBT--GGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHT
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCC----CeEEEEEeCcH--HHHhcCCccceeccccccccCCCCCCChHHHHHHHHHH
Confidence            688999 899999999999887642    24777777763  3332100        000000000 00000      00


Q ss_pred             eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022           72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN  135 (332)
Q Consensus        72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~  135 (332)
                      .....+.++++|+||++||..-..|       ..-.|++.++++   +.. . -.+-++|-|-.
T Consensus        76 ~~~I~~~l~~~d~vfi~AGlGGGTG-------tgaapviA~~ak---e~g-~-lvvaivtlPF~  127 (198)
T d1ofua1          76 RERISEVLEGADMVFITTGMGGGTG-------TGAAPIIAEVAK---EMG-I-LTVAVVTRPFP  127 (198)
T ss_dssp             HHHHHHHHTTCSEEEEEEETTSSHH-------HHHHHHHHHHHH---HTT-C-EEEEEEEECCG
T ss_pred             HHHHHHHhCCCCeEEEEecCCCCcc-------ccHHHHHHHHHH---HcC-C-CEEEEEecchH
Confidence            1124677899999999999763211       223455555554   333 1 34556676744

>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Pyrococcus abyssi [TaxId: 29292]

Probab=85.13  E-value=1.6  Score=32.82  Aligned_cols=73  Identities=12%  Similarity=0.062  Sum_probs=44.9

Q ss_pred             CCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022            4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG   81 (332)
Q Consensus         4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~   81 (332)
                      ...||+++|=.  +.|..+++..+...|.       +++++-...  -.......+...   .....+..+.+..+++++
T Consensus         3 ~gl~i~~vGD~~~srV~~Sli~~~~~~g~-------~~~~~~P~~--~~~~~~~~~~~~---~~~~~~~~~~d~~~av~~   70 (157)
T d1ml4a2           3 DGLKIGLLGDLKYGRTVHSLAEALTFYDV-------ELYLISPEL--LRMPRHIVEELR---EKGMKVVETTTLEDVIGK   70 (157)
T ss_dssp             SSEEEEEESCTTTCHHHHHHHHHGGGSCE-------EEEEECCGG--GCCCHHHHHHHH---HTTCCEEEESCTHHHHTT
T ss_pred             CCCEEEEEcCCccChHHHHHHHHHHhcCC-------cEEEEccch--hhcchHHHHHHH---hhcccceeecCHHHhhcc
Confidence            35799999932  5677777777665442       677776432  111111111111   123456778899999999


Q ss_pred             CcEEEEe
Q 020022           82 VNIAVMV   88 (332)
Q Consensus        82 aDiVi~~   88 (332)
                      +|+|..+
T Consensus        71 aDvvy~~   77 (157)
T d1ml4a2          71 LDVLYVT   77 (157)
T ss_dssp             CSEEEEC
T ss_pred             CcEEEee
Confidence            9988776

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=84.71  E-value=2.1  Score=32.94  Aligned_cols=38  Identities=13%  Similarity=0.234  Sum_probs=29.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN   52 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~   52 (332)
                      ..|+|+| +|.+|...+..+...+. .     +|..+|.++  ++++
T Consensus        31 ~tVlI~G-~GgvGl~ai~~ak~~G~-~-----~Vi~vd~~~--~kl~   68 (176)
T d1d1ta2          31 STCVVFG-LGGVGLSVIMGCKSAGA-S-----RIIGIDLNK--DKFE   68 (176)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-S-----EEEEECSCG--GGHH
T ss_pred             CEEEEEC-CCchhHHHHHHHHHcCC-c-----eEEEecCcH--HHHH
Confidence            5799999 69999998888877653 2     799999985  4543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=84.21  E-value=1.9  Score=35.08  Aligned_cols=34  Identities=24%  Similarity=0.265  Sum_probs=29.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      .++|+|-| .|.||+.++..|...|.       .++..|.+.
T Consensus        39 g~~v~IqG-~GnVG~~~a~~L~~~Ga-------kvv~~d~~~   72 (230)
T d1leha1          39 GLAVSVQG-LGNVAKALCKKLNTEGA-------KLVVTDVNK   72 (230)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-------EEEEECSCH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEeecccH
Confidence            47999999 89999999999998874       788898873

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=84.16  E-value=6.5  Score=33.11  Aligned_cols=32  Identities=13%  Similarity=0.340  Sum_probs=24.8

Q ss_pred             EEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            8 VLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         8 I~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..|+||+  ..+|.+++..|++.|.       +|.|.+...
T Consensus         5 AlITGaa~s~GIG~aiA~~la~~GA-------~V~i~~~~~   38 (329)
T d1uh5a_           5 CFIAGIGDTNGYGWGIAKELSKRNV-------KIIFGIWPP   38 (329)
T ss_dssp             EEEECCSSSSSHHHHHHHHHHHTTC-------EEEEEECGG
T ss_pred             EEEeCCCCCChHHHHHHHHHHHcCC-------EEEEEeCch
Confidence            3477843  3799999999999885       788887653

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.00  E-value=0.17  Score=36.18  Aligned_cols=23  Identities=26%  Similarity=0.238  Sum_probs=19.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHhc
Q 020022            5 PVRVLVTGAAGQIGYALVPMIARG   28 (332)
Q Consensus         5 ~~kI~IiGa~G~vG~~la~~l~~~   28 (332)
                      .+||+|+| +|.-|.-++..|+..
T Consensus        32 gK~VlVVG-~g~Sa~dia~~l~~~   54 (107)
T d2gv8a2          32 GESVLVVG-GASSANDLVRHLTPV   54 (107)
T ss_dssp             TCCEEEEC-SSHHHHHHHHHHTTT
T ss_pred             CCeEEEEC-CCCCHHHHHHHHHHh
Confidence            47999999 699999999988753

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.68  E-value=0.47  Score=40.32  Aligned_cols=33  Identities=27%  Similarity=0.302  Sum_probs=28.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..|+||| +|..|..++..|.+.|+       +++++|..+
T Consensus         8 ~dV~IIG-AG~sGl~~a~~L~~~G~-------~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVG-AGFSGLYALYRLRELGR-------SVHVIETAG   40 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSSS
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhCCC-------CEEEEEcCC
Confidence            5899999 69999999999998764       689999864

>d2b0ja2 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 5,10-methenyltetrahydromethanopterin hydrogenase, HMD
species: Archaeon Methanocaldococcus jannaschii [TaxId: 2190]

Probab=83.00  E-value=0.82  Score=37.63  Aligned_cols=49  Identities=16%  Similarity=0.104  Sum_probs=34.9

Q ss_pred             ceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022           68 GVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA  131 (332)
Q Consensus        68 ~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t  131 (332)
                      .++++++..+++++||+||.+-..+               +.++++++.|..+.+++++++..|
T Consensus       128 Gv~v~~d~~Eav~~ADiII~~vP~~---------------~~v~~Vi~~I~~~l~~g~Iiid~S  176 (242)
T d2b0ja2         128 GLKVTSDDREAVEGADIVITWLPKG---------------NKQPDIIKKFADAIPEGAIVTHAC  176 (242)
T ss_dssp             TCEEESCHHHHHTTCSEEEECCTTC---------------TTHHHHHHHHGGGSCTTCEEEECS
T ss_pred             CCEEECCHHHHHhcCCeEEEeeecH---------------HHHHHHHHHHHhhCCCCcEEEecC
Confidence            3678899999999999999884211               224456677888887777655444

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=82.92  E-value=0.27  Score=36.31  Aligned_cols=37  Identities=22%  Similarity=0.371  Sum_probs=25.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ++.+|+|+| +|..|..++..+....    ... -+.++|.++
T Consensus         2 ~~~~v~I~G-aG~~G~~l~~~l~~~~----~~~-iv~fiDdd~   38 (126)
T d2dt5a2           2 RKWGLCIVG-MGRLGSALADYPGFGE----SFE-LRGFFDVDP   38 (126)
T ss_dssp             SCEEEEEEC-CSHHHHHHHHCSCCCS----SEE-EEEEEESCT
T ss_pred             CCceEEEEc-CCHHHHHHHHhHhhcC----CcE-EEEEEeCch
Confidence            346899999 6999999887553221    112 378899774

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=82.30  E-value=0.36  Score=39.60  Aligned_cols=33  Identities=18%  Similarity=0.215  Sum_probs=28.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..|.||| +|..|...|..|++.|.       ++.|+|.++
T Consensus         5 ~DViIIG-aG~aGl~aA~~la~~G~-------~V~vlEk~~   37 (253)
T d2gqfa1           5 SENIIIG-AGAAGLFCAAQLAKLGK-------SVTVFDNGK   37 (253)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTC-------CEEEECSSS
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCC-------cEEEEecCC
Confidence            4699999 69999999999998874       699999874

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.20  E-value=0.52  Score=39.67  Aligned_cols=30  Identities=23%  Similarity=0.376  Sum_probs=26.4

Q ss_pred             EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      |+||| +|..|.+.|..|+..|.       ++.+++..
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~-------~V~VlE~~   31 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGL-------NVVVLEAR   31 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTC-------CEEEEESS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCC-------CEEEEecC
Confidence            78999 69999999999999874       68999865

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.86  E-value=0.39  Score=37.12  Aligned_cols=24  Identities=21%  Similarity=0.297  Sum_probs=19.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHhc
Q 020022            4 EPVRVLVTGAAGQIGYALVPMIARG   28 (332)
Q Consensus         4 ~~~kI~IiGa~G~vG~~la~~l~~~   28 (332)
                      .++||+||| +|.+|...+..+...
T Consensus         6 ~k~kv~iIG-~G~~g~~h~~~l~~~   29 (172)
T d1lc0a1           6 GKFGVVVVG-VGRAGSVRLRDLKDP   29 (172)
T ss_dssp             CSEEEEEEC-CSHHHHHHHHHHTSH
T ss_pred             CCcEEEEEc-CCHHHHHHHHHHHhC
Confidence            467999999 799999887776643

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.82  E-value=5  Score=29.09  Aligned_cols=36  Identities=22%  Similarity=0.384  Sum_probs=26.4

Q ss_pred             CCcEEEEEcCC---CchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            4 EPVRVLVTGAA---GQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         4 ~~~kI~IiGa~---G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      .|+.|+|+||+   +..|..+...|...+ -+     +|..+...
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g-----~v~pVnP~   45 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYK-KG-----KVYPVNIK   45 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCC-SS-----EEEEECSS
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcC-CC-----cEEEeccC
Confidence            47899999987   788888777776543 23     67787654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=81.59  E-value=0.77  Score=35.25  Aligned_cols=34  Identities=21%  Similarity=0.306  Sum_probs=26.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP   46 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~   46 (332)
                      ..|.|+| +|.+|...+..+...+. .     .+...|.++
T Consensus        34 ~~vli~G-aG~vG~~~~~~a~~~g~-~-----~vv~~~~~~   67 (172)
T d1h2ba2          34 AYVAIVG-VGGLGHIAVQLLKVMTP-A-----TVIALDVKE   67 (172)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCC-C-----EEEEEESSH
T ss_pred             CEEEEeC-CChHHHHHHHHHHhhcC-c-----ccccccchh
Confidence            5899999 69999998877766553 1     578888874

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=81.34  E-value=0.7  Score=37.37  Aligned_cols=24  Identities=17%  Similarity=0.124  Sum_probs=21.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHhccc
Q 020022            6 VRVLVTGAAGQIGYALVPMIARGVM   30 (332)
Q Consensus         6 ~kI~IiGa~G~vG~~la~~l~~~~~   30 (332)
                      +||+||| -|.-|.+-|..|...|+
T Consensus        45 KkIaViG-YGsQG~AhAlNLrDSG~   68 (226)
T d1qmga2          45 KQIGVIG-WGSQAPAQAQNLKDSLT   68 (226)
T ss_dssp             SEEEEEC-CSSHHHHHHHHHHHHHH
T ss_pred             CEEEEEE-eccHHHHHHHhChhhcc
Confidence            6899999 79999999999988653

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.92  E-value=7.8  Score=28.39  Aligned_cols=34  Identities=6%  Similarity=0.010  Sum_probs=26.5

Q ss_pred             CcEEEEEcCC---CchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022            5 PVRVLVTGAA---GQIGYALVPMIARGVMLGTDQPVILHMLDIP   45 (332)
Q Consensus         5 ~~kI~IiGa~---G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~   45 (332)
                      ++.|+|+||+   +..|..++..|...|.       +|.++..+
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~-------~v~pVnP~   55 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGY-------DVYPVNPK   55 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTC-------EEEEECTT
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCC-------EEEEECCc
Confidence            5789999987   5788888888888763       67888654