Citrus Sinensis ID: 020045
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 332 | 2.2.26 [Sep-21-2011] | |||||||
| P30171 | 377 | Actin-97 OS=Solanum tuber | N/A | no | 1.0 | 0.880 | 0.981 | 0.0 | |
| O81221 | 377 | Actin OS=Gossypium hirsut | N/A | no | 1.0 | 0.880 | 0.978 | 0.0 | |
| Q10DV7 | 377 | Actin-1 OS=Oryza sativa s | yes | no | 1.0 | 0.880 | 0.978 | 0.0 | |
| A2XLF2 | 377 | Actin-1 OS=Oryza sativa s | N/A | no | 1.0 | 0.880 | 0.978 | 0.0 | |
| Q05214 | 377 | Actin OS=Nicotiana tabacu | N/A | no | 1.0 | 0.880 | 0.975 | 0.0 | |
| P30167 | 377 | Actin-58 OS=Solanum tuber | N/A | no | 1.0 | 0.880 | 0.972 | 0.0 | |
| P53496 | 377 | Actin-11 OS=Arabidopsis t | yes | no | 1.0 | 0.880 | 0.969 | 0.0 | |
| P46258 | 377 | Actin-3 OS=Pisum sativum | N/A | no | 1.0 | 0.880 | 0.972 | 0.0 | |
| P30172 | 357 | Actin-100 (Fragment) OS=S | N/A | no | 1.0 | 0.929 | 0.963 | 0.0 | |
| P30173 | 377 | Actin-101 OS=Solanum tube | N/A | no | 1.0 | 0.880 | 0.963 | 0.0 |
| >sp|P30171|ACT11_SOLTU Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1 | Back alignment and function desciption |
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Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/332 (98%), Positives = 332/332 (100%)
Query: 1 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 60
MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
Query: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 120
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 121 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDY 180
PIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTT+AEREIVRD+KEKLAYIALDY
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDY 225
Query: 181 EQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIM 240
EQELET+KTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIM
Sbjct: 226 EQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIM 285
Query: 241 KCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 300
KCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 301 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 332
SILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 346 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
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Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. Solanum tuberosum (taxid: 4113) |
| >sp|O81221|ACT_GOSHI Actin OS=Gossypium hirsutum PE=3 SV=1 | Back alignment and function description |
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| >sp|Q10DV7|ACT1_ORYSJ Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2XLF2|ACT1_ORYSI Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q05214|ACT1_TOBAC Actin OS=Nicotiana tabacum PE=3 SV=1 | Back alignment and function description |
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| >sp|P30167|ACT3_SOLTU Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1 | Back alignment and function description |
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| >sp|P53496|ACT11_ARATH Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1 | Back alignment and function description |
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| >sp|P46258|ACT3_PEA Actin-3 OS=Pisum sativum PE=2 SV=1 | Back alignment and function description |
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| >sp|P30172|ACT12_SOLTU Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100 PE=3 SV=1 | Back alignment and function description |
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| >sp|P30173|ACT13_SOLTU Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 332 | ||||||
| 300484337 | 377 | actin [Citrus maxima] | 1.0 | 0.880 | 1.0 | 0.0 | |
| 224088196 | 377 | actin 3 [Populus trichocarpa] gi|2241378 | 1.0 | 0.880 | 0.996 | 0.0 | |
| 449437577 | 377 | PREDICTED: actin-like [Cucumis sativus] | 1.0 | 0.880 | 0.993 | 0.0 | |
| 255579745 | 377 | actin, putative [Ricinus communis] gi|22 | 1.0 | 0.880 | 0.993 | 0.0 | |
| 395146483 | 377 | putative actin-97 protein [Linum usitati | 1.0 | 0.880 | 0.993 | 0.0 | |
| 346683575 | 377 | actin 4 [Mangifera indica] | 1.0 | 0.880 | 0.993 | 0.0 | |
| 333595899 | 377 | actin [Platycodon grandiflorus] | 1.0 | 0.880 | 0.993 | 0.0 | |
| 356874568 | 377 | actin [Chrysanthemum seticuspe f. boreal | 1.0 | 0.880 | 0.993 | 0.0 | |
| 118481291 | 377 | unknown [Populus trichocarpa] | 1.0 | 0.880 | 0.990 | 0.0 | |
| 324331817 | 377 | actin [Camellia sinensis] | 1.0 | 0.880 | 0.990 | 0.0 |
| >gi|300484337|gb|ADK20401.1| actin [Citrus maxima] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/332 (100%), Positives = 332/332 (100%)
Query: 1 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 60
MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
Query: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 120
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 121 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDY 180
PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDY
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDY 225
Query: 181 EQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIM 240
EQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIM
Sbjct: 226 EQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIM 285
Query: 241 KCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 300
KCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 301 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 332
SILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 346 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
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Source: Citrus maxima Species: Citrus maxima Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224088196|ref|XP_002308365.1| actin 3 [Populus trichocarpa] gi|224137838|ref|XP_002322664.1| actin 7 [Populus trichocarpa] gi|118481698|gb|ABK92789.1| unknown [Populus trichocarpa] gi|118483656|gb|ABK93722.1| unknown [Populus trichocarpa] gi|118487386|gb|ABK95521.1| unknown [Populus trichocarpa] gi|222854341|gb|EEE91888.1| actin 3 [Populus trichocarpa] gi|222867294|gb|EEF04425.1| actin 7 [Populus trichocarpa] gi|301331528|gb|ADK70741.1| actin [Populus tomentosa] gi|301331531|gb|ADK70742.1| actin [Populus tomentosa] gi|301331533|gb|ADK70743.1| actin [Populus tomentosa] gi|301331536|gb|ADK70744.1| actin [Populus tomentosa] gi|301331540|gb|ADK70745.1| actin [Populus tomentosa] gi|301331543|gb|ADK70746.1| actin [Populus tomentosa] gi|301331546|gb|ADK70747.1| actin [Populus tomentosa] gi|301331549|gb|ADK70748.1| actin [Populus tomentosa] gi|301331552|gb|ADK70749.1| actin [Populus tomentosa] gi|301331555|gb|ADK70750.1| actin [Populus tomentosa] gi|301331558|gb|ADK70751.1| actin [Populus tomentosa] gi|301331560|gb|ADK70752.1| actin [Populus tomentosa] gi|301331563|gb|ADK70753.1| actin [Populus tomentosa] gi|301331566|gb|ADK70754.1| actin [Populus tomentosa] gi|301331569|gb|ADK70755.1| actin [Populus tomentosa] gi|301331573|gb|ADK70756.1| actin [Populus tomentosa] gi|301331576|gb|ADK70757.1| actin [Populus tomentosa] gi|301331579|gb|ADK70758.1| actin [Populus tomentosa] gi|301331582|gb|ADK70759.1| actin [Populus tomentosa] gi|301331585|gb|ADK70760.1| actin [Populus tomentosa] gi|301331588|gb|ADK70761.1| actin [Populus tomentosa] gi|301331591|gb|ADK70762.1| actin [Populus tomentosa] gi|301331594|gb|ADK70763.1| actin [Populus tomentosa] gi|301331597|gb|ADK70764.1| actin [Populus tomentosa] gi|301331599|gb|ADK70765.1| actin [Populus tomentosa] gi|301331603|gb|ADK70766.1| actin [Populus tomentosa] gi|301331606|gb|ADK70767.1| actin [Populus tomentosa] gi|301331609|gb|ADK70768.1| actin [Populus tomentosa] gi|301331611|gb|ADK70769.1| actin [Populus tomentosa] gi|301331613|gb|ADK70770.1| actin [Populus tomentosa] gi|301331615|gb|ADK70771.1| actin [Populus tomentosa] gi|301331617|gb|ADK70772.1| actin [Populus tomentosa] gi|301331619|gb|ADK70773.1| actin [Populus tomentosa] gi|301331622|gb|ADK70774.1| actin [Populus tomentosa] gi|301331625|gb|ADK70775.1| actin [Populus tomentosa] gi|301331628|gb|ADK70776.1| actin [Populus tomentosa] gi|301331631|gb|ADK70777.1| actin [Populus tomentosa] gi|301331634|gb|ADK70778.1| actin [Populus tomentosa] gi|301331637|gb|ADK70779.1| actin [Populus tomentosa] gi|301331640|gb|ADK70780.1| actin [Populus tomentosa] gi|301331643|gb|ADK70781.1| actin [Populus tomentosa] gi|429326368|gb|AFZ78524.1| actin [Populus tomentosa] | Back alignment and taxonomy information |
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| >gi|449437577|ref|XP_004136568.1| PREDICTED: actin-like [Cucumis sativus] gi|449511328|ref|XP_004163927.1| PREDICTED: actin-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255579745|ref|XP_002530711.1| actin, putative [Ricinus communis] gi|223529725|gb|EEF31665.1| actin, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|395146483|gb|AFN53639.1| putative actin-97 protein [Linum usitatissimum] | Back alignment and taxonomy information |
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| >gi|346683575|gb|AEO45960.1| actin 4 [Mangifera indica] | Back alignment and taxonomy information |
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| >gi|333595899|gb|AEF58501.1| actin [Platycodon grandiflorus] | Back alignment and taxonomy information |
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| >gi|356874568|dbj|BAL14664.1| actin [Chrysanthemum seticuspe f. boreale] | Back alignment and taxonomy information |
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| >gi|118481291|gb|ABK92589.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|324331817|gb|ADY38689.1| actin [Camellia sinensis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 332 | ||||||
| TAIR|locus:2099302 | 377 | ACT11 "AT3G12110" [Arabidopsis | 1.0 | 0.880 | 0.969 | 6.9e-173 | |
| TAIR|locus:2040656 | 377 | ACT1 "AT2G37620" [Arabidopsis | 1.0 | 0.880 | 0.966 | 1.4e-172 | |
| TAIR|locus:2084410 | 377 | ACT3 "AT3G53750" [Arabidopsis | 1.0 | 0.880 | 0.966 | 1.4e-172 | |
| TAIR|locus:2178128 | 377 | ACT7 "actin 7" [Arabidopsis th | 1.0 | 0.880 | 0.963 | 3.8e-172 | |
| TAIR|locus:2075160 | 377 | ACT12 "AT3G46520" [Arabidopsis | 1.0 | 0.880 | 0.966 | 2.1e-171 | |
| TAIR|locus:2148298 | 377 | ACT4 "actin 4" [Arabidopsis th | 1.0 | 0.880 | 0.963 | 5.6e-171 | |
| TAIR|locus:2028416 | 377 | ACT8 "AT1G49240" [Arabidopsis | 1.0 | 0.880 | 0.924 | 1.1e-167 | |
| TAIR|locus:2093954 | 377 | ACT2 "AT3G18780" [Arabidopsis | 1.0 | 0.880 | 0.924 | 1.1e-167 | |
| DICTYBASE|DDB_G0289811 | 376 | act10 "actin" [Dictyostelium d | 1.0 | 0.882 | 0.915 | 6e-167 | |
| DICTYBASE|DDB_G0289663 | 376 | act5 "actin" [Dictyostelium di | 1.0 | 0.882 | 0.915 | 6e-167 |
| TAIR|locus:2099302 ACT11 "AT3G12110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1680 (596.4 bits), Expect = 6.9e-173, P = 6.9e-173
Identities = 322/332 (96%), Positives = 329/332 (99%)
Query: 1 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 60
MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
Query: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 120
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 121 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDY 180
PIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTT+AEREIVRD+KEKLAYIALDY
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDY 225
Query: 181 EQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIM 240
EQE+ETA TSS+VEKSYELPDGQVITIG ERFRCPEVLFQPS++GMEAAGIHETTYNSIM
Sbjct: 226 EQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIM 285
Query: 241 KCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 300
KCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG
Sbjct: 286 KCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 345
Query: 301 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 332
SILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 346 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
|
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| TAIR|locus:2040656 ACT1 "AT2G37620" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2084410 ACT3 "AT3G53750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2178128 ACT7 "actin 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2075160 ACT12 "AT3G46520" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2148298 ACT4 "actin 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2028416 ACT8 "AT1G49240" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2093954 ACT2 "AT3G18780" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0289811 act10 "actin" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0289663 act5 "actin" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P84183 | ACT4_BOMMO | No assigned EC number | 0.9156 | 1.0 | 0.8829 | N/A | no |
| P92179 | ACTC_BIOGL | No assigned EC number | 0.9126 | 1.0 | 0.8829 | N/A | no |
| Q964E3 | ACTC_BIOAL | No assigned EC number | 0.9126 | 1.0 | 0.8829 | N/A | no |
| P0CJ47 | ACT3_ARATH | No assigned EC number | 0.9668 | 1.0 | 0.8806 | yes | no |
| P0CJ46 | ACT1_ARATH | No assigned EC number | 0.9668 | 1.0 | 0.8806 | yes | no |
| P17126 | ACT_HYDVU | No assigned EC number | 0.9096 | 1.0 | 0.8829 | N/A | no |
| A3C6D7 | ACT2_ORYSJ | No assigned EC number | 0.9518 | 1.0 | 0.8806 | no | no |
| Q964E2 | ACTC_BIOPF | No assigned EC number | 0.9126 | 1.0 | 0.8829 | N/A | no |
| P30163 | ACT2_ONCVO | No assigned EC number | 0.9096 | 1.0 | 0.8829 | N/A | no |
| Q964E1 | ACTC_BIOOB | No assigned EC number | 0.9156 | 1.0 | 0.8829 | N/A | no |
| Q964E0 | ACTC_BIOTE | No assigned EC number | 0.9156 | 1.0 | 0.8829 | N/A | no |
| P30168 | ACT6_SOLTU | No assigned EC number | 0.9427 | 1.0 | 0.8806 | N/A | no |
| P30167 | ACT3_SOLTU | No assigned EC number | 0.9728 | 1.0 | 0.8806 | N/A | no |
| O81221 | ACT_GOSHI | No assigned EC number | 0.9789 | 1.0 | 0.8806 | N/A | no |
| P30164 | ACT1_PEA | No assigned EC number | 0.9578 | 1.0 | 0.8829 | N/A | no |
| P30165 | ACT2_PEA | No assigned EC number | 0.9518 | 1.0 | 0.8829 | N/A | no |
| P46258 | ACT3_PEA | No assigned EC number | 0.9728 | 1.0 | 0.8806 | N/A | no |
| Q05214 | ACT1_TOBAC | No assigned EC number | 0.9759 | 1.0 | 0.8806 | N/A | no |
| P02578 | ACT1_ACACA | No assigned EC number | 0.9156 | 1.0 | 0.8853 | N/A | no |
| Q553U6 | ACT22_DICDI | No assigned EC number | 0.9096 | 1.0 | 0.8829 | yes | no |
| P84185 | ACT5C_ANOGA | No assigned EC number | 0.9156 | 1.0 | 0.8829 | yes | no |
| P12716 | ACTC_PISOC | No assigned EC number | 0.9126 | 1.0 | 0.8829 | N/A | no |
| P0C539 | ACT2_ORYSI | No assigned EC number | 0.9518 | 1.0 | 0.8806 | N/A | no |
| P53504 | ACT1_SORBI | No assigned EC number | 0.9578 | 1.0 | 0.8806 | N/A | no |
| P02572 | ACT2_DROME | No assigned EC number | 0.9186 | 1.0 | 0.8829 | yes | no |
| Q10DV7 | ACT1_ORYSJ | No assigned EC number | 0.9789 | 1.0 | 0.8806 | yes | no |
| O65316 | ACT_MESVI | No assigned EC number | 0.9337 | 1.0 | 0.8806 | N/A | no |
| P30172 | ACT12_SOLTU | No assigned EC number | 0.9638 | 1.0 | 0.9299 | N/A | no |
| Q96293 | ACT8_ARATH | No assigned EC number | 0.9246 | 1.0 | 0.8806 | no | no |
| Q96292 | ACT2_ARATH | No assigned EC number | 0.9246 | 1.0 | 0.8806 | no | no |
| P84184 | ACT3B_HELAM | No assigned EC number | 0.9156 | 1.0 | 0.8829 | N/A | no |
| O65315 | ACT_COLSC | No assigned EC number | 0.9307 | 1.0 | 0.8806 | N/A | no |
| Q25010 | ACT3A_HELAM | No assigned EC number | 0.9156 | 1.0 | 0.8829 | N/A | no |
| P53494 | ACT4_ARATH | No assigned EC number | 0.9638 | 1.0 | 0.8806 | yes | no |
| P53497 | ACT12_ARATH | No assigned EC number | 0.9668 | 1.0 | 0.8806 | yes | no |
| P53496 | ACT11_ARATH | No assigned EC number | 0.9698 | 1.0 | 0.8806 | yes | no |
| P30171 | ACT11_SOLTU | No assigned EC number | 0.9819 | 1.0 | 0.8806 | N/A | no |
| P30173 | ACT13_SOLTU | No assigned EC number | 0.9638 | 1.0 | 0.8806 | N/A | no |
| P53492 | ACT7_ARATH | No assigned EC number | 0.9638 | 1.0 | 0.8806 | yes | no |
| P07829 | ACT3_DICDI | No assigned EC number | 0.9036 | 1.0 | 0.8829 | yes | no |
| Q54GX7 | ACT10_DICDI | No assigned EC number | 0.9156 | 1.0 | 0.8829 | yes | no |
| Q10AZ4 | ACT3_ORYSJ | No assigned EC number | 0.9608 | 1.0 | 0.8806 | yes | no |
| A2XNS1 | ACT3_ORYSI | No assigned EC number | 0.9608 | 1.0 | 0.8806 | N/A | no |
| P0C542 | ACT7_ORYSI | No assigned EC number | 0.9337 | 1.0 | 0.8829 | N/A | no |
| P0C540 | ACT7_ORYSJ | No assigned EC number | 0.9337 | 1.0 | 0.8829 | no | no |
| A2XLF2 | ACT1_ORYSI | No assigned EC number | 0.9789 | 1.0 | 0.8806 | N/A | no |
| P07830 | ACT1_DICDI | No assigned EC number | 0.9156 | 1.0 | 0.8829 | yes | no |
| P10987 | ACT1_DROME | No assigned EC number | 0.9156 | 1.0 | 0.8829 | yes | no |
| P02576 | ACTA_PHYPO | No assigned EC number | 0.9216 | 1.0 | 0.8829 | N/A | no |
| P53461 | ACTC_HALRO | No assigned EC number | 0.9126 | 1.0 | 0.8829 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | ACT3 | SubName- Full=Putative uncharacterized protein;; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells (By similarity) (378 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | ADF6 | • | 0.700 | ||||||||
 | AROl-1 | • | 0.510 | ||||||||
 | grail3.0013025102 | • | 0.506 | ||||||||
 | grail3.0007002601 | • | 0.506 | ||||||||
 | eugene3.00011367 | • | 0.506 | ||||||||
 | estExt_fgenesh4_pm.C_LG_III0133 | • | 0.506 | ||||||||
 | TUA6 | • | 0.504 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 332 | |||
| PTZ00281 | 376 | PTZ00281, PTZ00281, actin; Provisional | 0.0 | |
| PTZ00004 | 378 | PTZ00004, PTZ00004, actin-2; Provisional | 0.0 | |
| pfam00022 | 367 | pfam00022, Actin, Actin | 0.0 | |
| smart00268 | 373 | smart00268, ACTIN, Actin | 0.0 | |
| PTZ00452 | 375 | PTZ00452, PTZ00452, actin; Provisional | 1e-153 | |
| PTZ00466 | 380 | PTZ00466, PTZ00466, actin-like protein; Provisiona | 1e-148 | |
| COG5277 | 444 | COG5277, COG5277, Actin and related proteins [Cyto | 1e-136 | |
| PTZ00280 | 414 | PTZ00280, PTZ00280, Actin-related protein 3; Provi | 1e-106 | |
| cd00012 | 185 | cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- | 4e-15 |
| >gnl|CDD|173506 PTZ00281, PTZ00281, actin; Provisional | Back alignment and domain information |
|---|
Score = 655 bits (1690), Expect = 0.0
Identities = 304/332 (91%), Positives = 325/332 (97%)
Query: 1 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 60
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 45 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 104
Query: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 120
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTV
Sbjct: 105 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTV 164
Query: 121 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDY 180
PIYEGYALPHAILRLDLAGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDF 224
Query: 181 EQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIM 240
E E++TA +SSA+EKSYELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIM
Sbjct: 225 EAEMQTAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIM 284
Query: 241 KCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 300
KCDVDIRKDLYGN+VLSGG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGG
Sbjct: 285 KCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGG 344
Query: 301 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 332
SILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 345 SILASLSTFQQMWISKEEYDESGPSIVHRKCF 376
|
Length = 376 |
| >gnl|CDD|240225 PTZ00004, PTZ00004, actin-2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|200935 pfam00022, Actin, Actin | Back alignment and domain information |
|---|
| >gnl|CDD|214592 smart00268, ACTIN, Actin | Back alignment and domain information |
|---|
| >gnl|CDD|185631 PTZ00452, PTZ00452, actin; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240426 PTZ00466, PTZ00466, actin-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|227602 COG5277, COG5277, Actin and related proteins [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|240343 PTZ00280, PTZ00280, Actin-related protein 3; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 332 | |||
| PTZ00452 | 375 | actin; Provisional | 100.0 | |
| PTZ00281 | 376 | actin; Provisional | 100.0 | |
| PTZ00466 | 380 | actin-like protein; Provisional | 100.0 | |
| KOG0676 | 372 | consensus Actin and related proteins [Cytoskeleton | 100.0 | |
| PTZ00004 | 378 | actin-2; Provisional | 100.0 | |
| PTZ00280 | 414 | Actin-related protein 3; Provisional | 100.0 | |
| smart00268 | 373 | ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki | 100.0 | |
| PF00022 | 393 | Actin: Actin; InterPro: IPR004000 Actin [, ] is a | 100.0 | |
| cd00012 | 371 | ACTIN Actin; An ubiquitous protein involved in the | 100.0 | |
| KOG0679 | 426 | consensus Actin-related protein - Arp4p/Act3p [Cyt | 100.0 | |
| KOG0677 | 389 | consensus Actin-related protein Arp2/3 complex, su | 100.0 | |
| COG5277 | 444 | Actin and related proteins [Cytoskeleton] | 100.0 | |
| KOG0680 | 400 | consensus Actin-related protein - Arp6p [Cytoskele | 100.0 | |
| KOG0681 | 645 | consensus Actin-related protein - Arp5p [Cytoskele | 100.0 | |
| KOG0678 | 415 | consensus Actin-related protein Arp2/3 complex, su | 100.0 | |
| KOG0797 | 618 | consensus Actin-related protein [Cytoskeleton] | 100.0 | |
| TIGR00904 | 333 | mreB cell shape determining protein, MreB/Mrl fami | 100.0 | |
| PRK13930 | 335 | rod shape-determining protein MreB; Provisional | 100.0 | |
| PRK13929 | 335 | rod-share determining protein MreBH; Provisional | 100.0 | |
| PRK13927 | 334 | rod shape-determining protein MreB; Provisional | 99.97 | |
| PF06723 | 326 | MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba | 99.97 | |
| PRK13928 | 336 | rod shape-determining protein Mbl; Provisional | 99.96 | |
| COG1077 | 342 | MreB Actin-like ATPase involved in cell morphogene | 99.91 | |
| TIGR02529 | 239 | EutJ ethanolamine utilization protein EutJ family | 99.85 | |
| PRK15080 | 267 | ethanolamine utilization protein EutJ; Provisional | 99.76 | |
| CHL00094 | 621 | dnaK heat shock protein 70 | 99.56 | |
| PRK01433 | 595 | hscA chaperone protein HscA; Provisional | 99.55 | |
| TIGR01991 | 599 | HscA Fe-S protein assembly chaperone HscA. The Hea | 99.52 | |
| PLN03184 | 673 | chloroplast Hsp70; Provisional | 99.52 | |
| PTZ00400 | 663 | DnaK-type molecular chaperone; Provisional | 99.52 | |
| PRK09472 | 420 | ftsA cell division protein FtsA; Reviewed | 99.52 | |
| PRK00290 | 627 | dnaK molecular chaperone DnaK; Provisional | 99.52 | |
| PRK05183 | 616 | hscA chaperone protein HscA; Provisional | 99.51 | |
| TIGR02350 | 595 | prok_dnaK chaperone protein DnaK. Members of this | 99.5 | |
| PTZ00186 | 657 | heat shock 70 kDa precursor protein; Provisional | 99.5 | |
| PRK13410 | 668 | molecular chaperone DnaK; Provisional | 99.49 | |
| PRK13411 | 653 | molecular chaperone DnaK; Provisional | 99.49 | |
| TIGR01174 | 371 | ftsA cell division protein FtsA. This bacterial ce | 99.44 | |
| PTZ00009 | 653 | heat shock 70 kDa protein; Provisional | 99.43 | |
| COG0849 | 418 | ftsA Cell division ATPase FtsA [Cell division and | 99.41 | |
| PRK11678 | 450 | putative chaperone; Provisional | 99.4 | |
| PF00012 | 602 | HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho | 99.35 | |
| COG0443 | 579 | DnaK Molecular chaperone [Posttranslational modifi | 99.24 | |
| PRK13917 | 344 | plasmid segregation protein ParM; Provisional | 99.07 | |
| COG4820 | 277 | EutJ Ethanolamine utilization protein, possible ch | 99.0 | |
| TIGR03739 | 320 | PRTRC_D PRTRC system protein D. A novel genetic sy | 99.0 | |
| TIGR01175 | 348 | pilM type IV pilus assembly protein PilM. This pro | 98.98 | |
| KOG0100 | 663 | consensus Molecular chaperones GRP78/BiP/KAR2, HSP | 98.88 | |
| PF11104 | 340 | PilM_2: Type IV pilus assembly protein PilM;; PDB: | 98.79 | |
| KOG0101 | 620 | consensus Molecular chaperones HSP70/HSC70, HSP70 | 98.63 | |
| COG4972 | 354 | PilM Tfp pilus assembly protein, ATPase PilM [Cell | 98.53 | |
| KOG0104 | 902 | consensus Molecular chaperones GRP170/SIL1, HSP70 | 98.36 | |
| KOG0103 | 727 | consensus Molecular chaperones HSP105/HSP110/SSE1, | 98.28 | |
| PF06406 | 318 | StbA: StbA protein; InterPro: IPR009440 This entry | 98.06 | |
| KOG0102 | 640 | consensus Molecular chaperones mortalin/PBP74/GRP7 | 98.05 | |
| TIGR00241 | 248 | CoA_E_activ CoA-substrate-specific enzyme activase | 97.95 | |
| TIGR03286 | 404 | methan_mark_15 putative methanogenesis marker prot | 97.08 | |
| COG1924 | 396 | Activator of 2-hydroxyglutaryl-CoA dehydratase (HS | 96.97 | |
| TIGR02261 | 262 | benz_CoA_red_D benzoyl-CoA reductase, bcr type, su | 96.97 | |
| PRK10719 | 475 | eutA reactivating factor for ethanolamine ammonia | 96.82 | |
| TIGR03192 | 293 | benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s | 96.81 | |
| PF08841 | 332 | DDR: Diol dehydratase reactivase ATPase-like domai | 96.37 | |
| TIGR02259 | 432 | benz_CoA_red_A benzoyl-CoA reductase, bcr type, su | 96.29 | |
| PRK13317 | 277 | pantothenate kinase; Provisional | 95.66 | |
| PF01869 | 271 | BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In | 94.66 | |
| PF06277 | 473 | EutA: Ethanolamine utilisation protein EutA; Inter | 94.6 | |
| PF14450 | 120 | FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B | 94.15 | |
| PF01968 | 290 | Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr | 92.89 | |
| COG2441 | 374 | Predicted butyrate kinase [Energy production and c | 92.36 | |
| PF02541 | 285 | Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I | 89.42 | |
| TIGR03123 | 318 | one_C_unchar_1 probable H4MPT-linked C1 transfer p | 88.88 | |
| PF07318 | 343 | DUF1464: Protein of unknown function (DUF1464); In | 86.99 | |
| TIGR00744 | 318 | ROK_glcA_fam ROK family protein (putative glucokin | 86.88 | |
| COG1548 | 330 | Predicted transcriptional regulator/sugar kinase [ | 85.48 | |
| KOG2708 | 336 | consensus Predicted metalloprotease with chaperone | 84.21 | |
| COG0248 | 492 | GppA Exopolyphosphatase [Nucleotide transport and | 82.08 |
| >PTZ00452 actin; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-77 Score=553.10 Aligned_cols=327 Identities=58% Similarity=1.062 Sum_probs=311.5
Q ss_pred CcceeeccccccccCceeeeccccCCCCCCHHHHHHHHHHHhhhhcCCCCCCCcEEEeeCCCCCHHhHHHHhhhcccccC
Q 020045 6 QKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 85 (332)
Q Consensus 6 ~~~~~vG~~a~~~~~~~~~~~p~~~g~i~d~~~~~~~l~~~~~~~l~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~ 85 (332)
.+++++|++|...+..+++++|+++|.|.|||.++.+|+|+|++.|+++|+++|+++++|+++++..|+++++++||.|+
T Consensus 49 ~~~~~iG~~~~~~~~~~~l~~Pi~~G~I~dwd~~e~iw~~~f~~~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~ 128 (375)
T PTZ00452 49 NKEYYVGEEAQAKRGVLAIKEPIQNGIINSWDDIEIIWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFN 128 (375)
T ss_pred ccceEEChhhhccccCcEEcccCcCCEEcCHHHHHHHHHHHHHhhcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccC
Confidence 56789999998888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeechhhhhhccCCceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHhcCCCccchhHHHH
Q 020045 86 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREI 165 (332)
Q Consensus 86 ~~~v~~~~~~~~a~~~~g~~t~lVVDiG~~~t~v~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~ 165 (332)
+|++++.+++++++|++|++||+|||+|++.|+|+||+||++++++..++++||++++++|.++|..+++.+....+.++
T Consensus 129 vp~~~~~~~~~lslya~g~~tglVVDiG~~~t~v~PV~dG~~l~~~~~r~~~gG~~lt~~L~~lL~~~~~~~~~~~~~~~ 208 (375)
T PTZ00452 129 TPCLYISNEAVLSLYTSGKTIGLVVDSGEGVTHCVPVFEGHQIPQAITKINLAGRLCTDYLTQILQELGYSLTEPHQRII 208 (375)
T ss_pred CceEEEechHHHHHHHCCCceeeeecCCCCcceEEEEECCEEeccceEEeeccchHHHHHHHHHHHhcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888776667889
Q ss_pred HHHHHHHcccccccHHHHHHHhccCCCccceEECCCCceEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHH
Q 020045 166 VRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVD 245 (332)
Q Consensus 166 ~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~i~~~i~~~~~~ 245 (332)
++++|+++||++.|+.++++.....+.....|.+|||+.+.++.+|+.+||+||+|++++.+..+|+++|.++|.+||+|
T Consensus 209 ~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~y~LPDg~~i~l~~er~~~~E~LF~P~~~g~~~~gi~~~i~~si~~c~~d 288 (375)
T PTZ00452 209 VKNIKERLCYTALDPQDEKRIYKESNSQDSPYKLPDGNILTIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLD 288 (375)
T ss_pred HHHHHHHhccccCcHHHHHHHhhccCCcCceEECCCCCEEEeehHHhcCcccccChhhcCCCCCChhHHHHHHHHhCCHh
Confidence 99999999999999988776554434456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccccCccCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCc
Q 020045 246 IRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPS 325 (332)
Q Consensus 246 ~r~~l~~nIvl~GG~s~i~G~~erl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~ey~e~G~~ 325 (332)
.|+.|++||||+||+|++|||.+||++||+.++|.+.++++..++++.+++|.|||++|++++|++.||||+||+|+|++
T Consensus 289 ~r~~L~~nIvL~GG~Sl~~Gf~~RL~~El~~~~p~~~~v~v~~~~~r~~~aW~GgSilasl~~f~~~~vtk~eYeE~G~~ 368 (375)
T PTZ00452 289 LRQELCRNIVLSGGTTLFPGIANRLSNELTNLVPSQLKIQVAAPPDRRFSAWIGGSIQCTLSTQQPQWIKRQEYDEQGPS 368 (375)
T ss_pred HHHHhhccEEEecccccccCHHHHHHHHHHHhCCCCceeEEecCCCcceeEEECchhhcCccchhhhEeEHHHHhccCcc
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred ccccccC
Q 020045 326 IVHRKCF 332 (332)
Q Consensus 326 ~i~~k~~ 332 (332)
+++||||
T Consensus 369 i~~~k~~ 375 (375)
T PTZ00452 369 IVHRKCF 375 (375)
T ss_pred eeeeecC
Confidence 9999997
|
|
| >PTZ00281 actin; Provisional | Back alignment and domain information |
|---|
| >PTZ00466 actin-like protein; Provisional | Back alignment and domain information |
|---|
| >KOG0676 consensus Actin and related proteins [Cytoskeleton] | Back alignment and domain information |
|---|
| >PTZ00004 actin-2; Provisional | Back alignment and domain information |
|---|
| >PTZ00280 Actin-related protein 3; Provisional | Back alignment and domain information |
|---|
| >smart00268 ACTIN Actin | Back alignment and domain information |
|---|
| >PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton | Back alignment and domain information |
|---|
| >cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton | Back alignment and domain information |
|---|
| >KOG0679 consensus Actin-related protein - Arp4p/Act3p [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0677 consensus Actin-related protein Arp2/3 complex, subunit Arp2 [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5277 Actin and related proteins [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0680 consensus Actin-related protein - Arp6p [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0678 consensus Actin-related protein Arp2/3 complex, subunit Arp3 [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0797 consensus Actin-related protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR00904 mreB cell shape determining protein, MreB/Mrl family | Back alignment and domain information |
|---|
| >PRK13930 rod shape-determining protein MreB; Provisional | Back alignment and domain information |
|---|
| >PRK13929 rod-share determining protein MreBH; Provisional | Back alignment and domain information |
|---|
| >PRK13927 rod shape-determining protein MreB; Provisional | Back alignment and domain information |
|---|
| >PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes | Back alignment and domain information |
|---|
| >PRK13928 rod shape-determining protein Mbl; Provisional | Back alignment and domain information |
|---|
| >COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02529 EutJ ethanolamine utilization protein EutJ family protein | Back alignment and domain information |
|---|
| >PRK15080 ethanolamine utilization protein EutJ; Provisional | Back alignment and domain information |
|---|
| >CHL00094 dnaK heat shock protein 70 | Back alignment and domain information |
|---|
| >PRK01433 hscA chaperone protein HscA; Provisional | Back alignment and domain information |
|---|
| >TIGR01991 HscA Fe-S protein assembly chaperone HscA | Back alignment and domain information |
|---|
| >PLN03184 chloroplast Hsp70; Provisional | Back alignment and domain information |
|---|
| >PTZ00400 DnaK-type molecular chaperone; Provisional | Back alignment and domain information |
|---|
| >PRK09472 ftsA cell division protein FtsA; Reviewed | Back alignment and domain information |
|---|
| >PRK00290 dnaK molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >PRK05183 hscA chaperone protein HscA; Provisional | Back alignment and domain information |
|---|
| >TIGR02350 prok_dnaK chaperone protein DnaK | Back alignment and domain information |
|---|
| >PTZ00186 heat shock 70 kDa precursor protein; Provisional | Back alignment and domain information |
|---|
| >PRK13410 molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >PRK13411 molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >TIGR01174 ftsA cell division protein FtsA | Back alignment and domain information |
|---|
| >PTZ00009 heat shock 70 kDa protein; Provisional | Back alignment and domain information |
|---|
| >COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK11678 putative chaperone; Provisional | Back alignment and domain information |
|---|
| >PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins | Back alignment and domain information |
|---|
| >COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK13917 plasmid segregation protein ParM; Provisional | Back alignment and domain information |
|---|
| >COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03739 PRTRC_D PRTRC system protein D | Back alignment and domain information |
|---|
| >TIGR01175 pilM type IV pilus assembly protein PilM | Back alignment and domain information |
|---|
| >KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A | Back alignment and domain information |
|---|
| >KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] | Back alignment and domain information |
|---|
| >KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative | Back alignment and domain information |
|---|
| >TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 | Back alignment and domain information |
|---|
| >COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] | Back alignment and domain information |
|---|
| >TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D | Back alignment and domain information |
|---|
| >PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional | Back alignment and domain information |
|---|
| >TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit | Back alignment and domain information |
|---|
| >PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] | Back alignment and domain information |
|---|
| >TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A | Back alignment and domain information |
|---|
| >PRK13317 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
| >PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis | Back alignment and domain information |
|---|
| >PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon | Back alignment and domain information |
|---|
| >PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T | Back alignment and domain information |
|---|
| >PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3 | Back alignment and domain information |
|---|
| >COG2441 Predicted butyrate kinase [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 | Back alignment and domain information |
|---|
| >TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein | Back alignment and domain information |
|---|
| >PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length | Back alignment and domain information |
|---|
| >TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) | Back alignment and domain information |
|---|
| >COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 332 | ||||
| 1nlv_A | 375 | Crystal Structure Of Dictyostelium Discoideum Actin | 0.0 | ||
| 3chw_A | 375 | Complex Of Dictyostelium Discoideum Actin With Prof | 0.0 | ||
| 4efh_A | 375 | Acanthamoeba Actin Complex With Spir Domain D Lengt | 0.0 | ||
| 3ci5_A | 375 | Complex Of Phosphorylated Dictyostelium Discoideum | 0.0 | ||
| 1dej_A | 375 | Crystal Structure Of A DictyosteliumTETRAHYMENA CHI | 0.0 | ||
| 1d4x_A | 375 | Crystal Structure Of Caenorhabditis Elegans Mg-Atp | 0.0 | ||
| 3byh_A | 374 | Model Of Actin-Fimbrin Abd2 Complex Length = 374 | 0.0 | ||
| 3u4l_A | 375 | Cryocooled Bovine Profilin:actin Crystal Structure | 0.0 | ||
| 2oan_A | 375 | Structure Of Oxidized Beta-Actin Length = 375 | 0.0 | ||
| 1c0g_A | 375 | Crystal Structure Of 1:1 Complex Between Gelsolin S | 0.0 | ||
| 3eks_A | 375 | Crystal Structure Of Monomeric Actin Bound To Cytoc | 0.0 | ||
| 2hf3_A | 374 | Crystal Structure Of Monomeric Actin In The Adp Bou | 0.0 | ||
| 2btf_A | 375 | The Structure Of Crystalline Profilin-Beta-Actin Le | 0.0 | ||
| 3a5l_C | 375 | Crystal Structure Of A Dictyostelium P109a Mg2+-Act | 0.0 | ||
| 3a5m_C | 375 | Crystal Structure Of A Dictyostelium P109i Mg2+-Act | 0.0 | ||
| 1c0f_A | 368 | Crystal Structure Of Dictyostelium Caatp-Actin In C | 0.0 | ||
| 1ijj_A | 377 | The X-Ray Crystal Structure Of The Complex Between | 0.0 | ||
| 4b1v_A | 376 | Structure Of The Phactr1 Rpel-N Domain Bound To G-A | 0.0 | ||
| 1kxp_A | 375 | Crystal Structure Of Human Vitamin D-binding Protei | 0.0 | ||
| 1t44_A | 370 | Structural Basis Of Actin Sequestration By Thymosin | 0.0 | ||
| 2gwj_A | 371 | Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form | 0.0 | ||
| 3g37_O | 376 | Cryo-Em Structure Of Actin Filament In The Presence | 0.0 | ||
| 1qz5_A | 375 | Structure Of Rabbit Actin In Complex With Kabiramid | 0.0 | ||
| 3w3d_A | 374 | Crystal Structure Of Smooth Muscle G Actin Dnase I | 0.0 | ||
| 1eqy_A | 377 | Complex Between Rabbit Muscle Alpha-Actin: Human Ge | 0.0 | ||
| 3b63_L | 365 | Actin Filament Model In The Extended Form Of Acroms | 0.0 | ||
| 1lcu_A | 371 | Polylysine Induces An Antiparallel Actin Dimer That | 1e-180 | ||
| 2w49_D | 372 | Isometrically Contracting Insect Asynchronous Fligh | 1e-180 | ||
| 3m6g_A | 371 | Crystal Structure Of Actin In Complex With Lobophor | 1e-179 | ||
| 1atn_A | 373 | Atomic Structure Of The Actin:dnase I Complex Lengt | 1e-179 | ||
| 3b63_E | 365 | Actin Filament Model In The Extended Form Of Acroms | 1e-178 | ||
| 1yag_A | 375 | Structure Of The Yeast Actin-human Gelsolin Segment | 1e-177 | ||
| 3mn5_A | 359 | Structures Of Actin-Bound Wh2 Domains Of Spire And | 1e-176 | ||
| 1yvn_A | 375 | The Yeast Actin Val 159 Asn Mutant Complex With Hum | 1e-176 | ||
| 3b63_B | 364 | Actin Filament Model In The Extended Form Of Acroms | 1e-176 | ||
| 3b63_C | 365 | Actin Filament Model In The Extended Form Of Acroms | 1e-173 | ||
| 3b63_A | 365 | Actin Filament Model In The Extended Form Of Acroms | 1e-173 | ||
| 3b63_D | 357 | Actin Filament Model In The Extended Form Of Acroms | 1e-173 | ||
| 3b63_F | 357 | Actin Filament Model In The Extended Form Of Acroms | 1e-171 | ||
| 1k8k_B | 394 | Crystal Structure Of Arp23 COMPLEX Length = 394 | 3e-90 | ||
| 2p9k_B | 394 | Crystal Structure Of Bovine Arp23 COMPLEX CO-Crysta | 3e-90 | ||
| 1k8k_A | 418 | Crystal Structure Of Arp23 COMPLEX Length = 418 | 6e-56 | ||
| 3dwl_A | 427 | Crystal Structure Of Fission Yeast Arp2/3 Complex L | 7e-53 | ||
| 3qb0_A | 498 | Crystal Structure Of Actin-Related Protein Arp4 Fro | 3e-20 | ||
| 4i6m_A | 477 | Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex | 2e-11 | ||
| 4fo0_A | 593 | Human Actin-Related Protein Arp8 In Its Atp-Bound S | 6e-07 | ||
| 4i6m_B | 439 | Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex | 7e-06 |
| >pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin Complexed With Ca Atp And Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
|
| >pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin And The Last Poly-Pro Of Human Vasp Length = 375 | Back alignment and structure |
| >pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D Length = 375 | Back alignment and structure |
| >pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin With Gelsolin Length = 375 | Back alignment and structure |
| >pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin Complexed With Human Gelsolin Segment 1 At 1.75 A Resolution Length = 375 | Back alignment and structure |
| >pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex Length = 374 | Back alignment and structure |
| >pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4 A Length = 375 | Back alignment and structure |
| >pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin Length = 375 | Back alignment and structure |
| >pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment 1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT 228: Q228kT229AA230YE360H) Length = 375 | Back alignment and structure |
| >pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin D Length = 375 | Back alignment and structure |
| >pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound State Length = 374 | Back alignment and structure |
| >pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin Length = 375 | Back alignment and structure |
| >pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex With Gelsolin Segment 1 Length = 368 | Back alignment and structure |
| >pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit Skeletal Muscle Actin And Latrunculin A At 2.85 A Resolution Length = 377 | Back alignment and structure |
| >pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin Length = 376 | Back alignment and structure |
| >pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In Complex With Skeletal Actin Length = 375 | Back alignment and structure |
| >pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4: Implications For Arp23 ACTIVATION Length = 370 | Back alignment and structure |
| >pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form Length = 371 | Back alignment and structure |
| >pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of Phosphate Length = 376 | Back alignment and structure |
| >pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C Length = 375 | Back alignment and structure |
| >pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex Length = 374 | Back alignment and structure |
| >pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Domain 1 Length = 377 | Back alignment and structure |
| >pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That Nucleates Filament Assembly: Crystal Structure At 3.5 A Resolution Length = 371 | Back alignment and structure |
| >pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 372 | Back alignment and structure |
| >pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide Length = 371 | Back alignment and structure |
| >pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex Length = 373 | Back alignment and structure |
| >pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1 Complex Length = 375 | Back alignment and structure |
| >pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The Implication For Filament Nucleation Length = 359 | Back alignment and structure |
| >pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 364 | Back alignment and structure |
| >pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357 | Back alignment and structure |
| >pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357 | Back alignment and structure |
| >pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX Length = 394 | Back alignment and structure |
| >pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized With Atp And Crosslinked With Glutaraldehyde Length = 394 | Back alignment and structure |
| >pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX Length = 418 | Back alignment and structure |
| >pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking The Arp2 Subunit Length = 427 | Back alignment and structure |
| >pdb|3QB0|A Chain A, Crystal Structure Of Actin-Related Protein Arp4 From S. Cerevisiae Complexed With Atp Length = 498 | Back alignment and structure |
| >pdb|4I6M|A Chain A, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of Swi/snf Chromatin Remodeler Length = 477 | Back alignment and structure |
| >pdb|4FO0|A Chain A, Human Actin-Related Protein Arp8 In Its Atp-Bound State Length = 593 | Back alignment and structure |
| >pdb|4I6M|B Chain B, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of Swi/snf Chromatin Remodeler Length = 439 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Length = 375 | Back alignment and structure |
|---|
Score = 679 bits (1755), Expect = 0.0
Identities = 294/332 (88%), Positives = 315/332 (94%)
Query: 1 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 60
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPT 103
Query: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 120
LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H V
Sbjct: 104 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 163
Query: 121 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDY 180
PIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+
Sbjct: 164 PIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDF 223
Query: 181 EQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIM 240
E E+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIM
Sbjct: 224 ENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIM 283
Query: 241 KCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG 300
KCD+DIRKDLY N V+SGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGG
Sbjct: 284 KCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 343
Query: 301 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 332
SILASLSTFQQMWI K EYDE+GPSIVHRKCF
Sbjct: 344 SILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375
|
| >1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Length = 394 | Back alignment and structure |
|---|
| >1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Length = 418 | Back alignment and structure |
|---|
| >3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 427 | Back alignment and structure |
|---|
| >3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498 | Back alignment and structure |
|---|
| >3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 332 | |||
| 3dwl_A | 427 | Actin-related protein 3; propellor, actin-binding, | 100.0 | |
| 3qb0_A | 498 | Actin-related protein 4; actin fold, ATP binding, | 100.0 | |
| 2fxu_A | 375 | Alpha-actin-1, actin, alpha skeletal muscle; actin | 100.0 | |
| 1k8k_B | 394 | ARP2, actin-like protein 2; beta-propeller, struct | 100.0 | |
| 4fo0_A | 593 | Actin-related protein 8; chromatin remodeling, nuc | 100.0 | |
| 1k8k_A | 418 | ARP3, actin-like protein 3, actin-2; beta-propelle | 100.0 | |
| 4am6_A | 655 | Actin-like protein ARP8; nuclear protein, chromati | 100.0 | |
| 1jce_A | 344 | ROD shape-determining protein MREB; MBL, actin, HS | 99.97 | |
| 3h1q_A | 272 | Ethanolamine utilization protein EUTJ; ethanolamin | 99.86 | |
| 2v7y_A | 509 | Chaperone protein DNAK; HSP70, heat shock protein, | 99.81 | |
| 1dkg_D | 383 | Molecular chaperone DNAK; HSP70, GRPE, nucleotide | 99.79 | |
| 3qfu_A | 394 | 78 kDa glucose-regulated protein homolog; HSP70, K | 99.76 | |
| 3i33_A | 404 | Heat shock-related 70 kDa protein 2; protein-ADP c | 99.73 | |
| 1yuw_A | 554 | Heat shock cognate 71 kDa protein; chaperone; 2.60 | 99.64 | |
| 2kho_A | 605 | Heat shock protein 70; molecular chaperone, HSP70, | 99.63 | |
| 3d2f_A | 675 | Heat shock protein homolog SSE1; nucleotide exchan | 99.6 | |
| 2ych_A | 377 | Competence protein PILM; cell cycle, type IV pilus | 99.58 | |
| 2fsj_A | 346 | Hypothetical protein TA0583; actin homologs, archa | 99.57 | |
| 4gni_A | 409 | Putative heat shock protein; HSP70-type ATPase, AT | 99.57 | |
| 4a2a_A | 419 | Cell division protein FTSA, putative; cell cycle, | 99.49 | |
| 4b9q_A | 605 | Chaperone protein DNAK; HET: ATP; 2.40A {Escherich | 99.42 | |
| 2zgy_A | 320 | Plasmid segregation protein PARM; plasmid partitio | 99.3 | |
| 3js6_A | 355 | Uncharacterized PARM protein; partition, segregati | 99.24 | |
| 4apw_A | 329 | ALP12; actin-like protein; 19.70A {Clostridium tet | 99.2 | |
| 2d0o_A | 610 | DIOL dehydratase-reactivating factor large subunit | 98.86 | |
| 1nbw_A | 607 | Glycerol dehydratase reactivase alpha subunit; mol | 98.84 | |
| 4ehu_A | 276 | Activator of 2-hydroxyisocaproyl-COA dehydratase; | 97.53 | |
| 2ews_A | 287 | Pantothenate kinase; PANK, structural genomics, st | 96.39 | |
| 1hux_A | 270 | Activator of (R)-2-hydroxyglutaryl-COA dehydratase | 96.11 | |
| 2i7n_A | 360 | Pantothenate kinase 1; PANK, transferase; HET: ACO | 94.79 | |
| 2gup_A | 292 | ROK family protein; sugar kinase, streptococcus pn | 94.01 | |
| 3r8e_A | 321 | Hypothetical sugar kinase; ribonuclease H-like mot | 93.81 | |
| 3cet_A | 334 | Conserved archaeal protein; Q6M145, MRR63, NESG, X | 93.73 | |
| 3vgl_A | 321 | Glucokinase; ROK family, transferase; HET: BGC ANP | 92.97 | |
| 1t6c_A | 315 | Exopolyphosphatase; alpha/beta protein, actin-like | 90.77 | |
| 2qm1_A | 326 | Glucokinase; alpha-beta structure, putative helix- | 90.18 | |
| 2aa4_A | 289 | Mannac kinase, putative N-acetylmannosamine kinase | 89.9 | |
| 4db3_A | 327 | Glcnac kinase, N-acetyl-D-glucosamine kinase; stru | 89.76 | |
| 3vov_A | 302 | Glucokinase, hexokinase; ROK, sugar kinase, transf | 89.44 | |
| 3cer_A | 343 | Possible exopolyphosphatase-like protein; NESG, BL | 88.83 | |
| 3mdq_A | 315 | Exopolyphosphatase; structural genomics, joint cen | 87.86 | |
| 3hi0_A | 508 | Putative exopolyphosphatase; 17739545, structural | 84.63 | |
| 1u6z_A | 513 | Exopolyphosphatase; alpha/beta protein, askha (ace | 81.9 |
| >3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-74 Score=541.83 Aligned_cols=327 Identities=37% Similarity=0.681 Sum_probs=291.1
Q ss_pred CCCCcceeeccccccccC-ceeeeccccCCCCCCHHHHHHHHHHHhhhhcCCCCCCCcEEEeeCCCCCHHhHHHHhhhcc
Q 020045 3 GMGQKDAYVGDEAQSKRG-ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 81 (332)
Q Consensus 3 ~~~~~~~~vG~~a~~~~~-~~~~~~p~~~g~i~d~~~~~~~l~~~~~~~l~~~~~~~~vvl~~~~~~~~~~~~~l~~~lf 81 (332)
|++.++++||++|+.++. .+++++|+++|.|.|||++|.+|+|+|++.|++++.++|+++++|+++++..|+++++++|
T Consensus 68 ~~~~~~~~vG~ea~~~~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~F 147 (427)
T 3dwl_A 68 ATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMF 147 (427)
T ss_dssp -CCSSCCEETHHHHHTHHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHT
T ss_pred CcccCCeEEchHHhhCcccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHH
Confidence 456679999999998875 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCeEEEeechhhhhhccC--------CceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHhc
Q 020045 82 ETFNTPAMYVAIQAVLSLYASG--------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER 153 (332)
Q Consensus 82 e~~~~~~v~~~~~~~~a~~~~g--------~~t~lVVDiG~~~t~v~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~ 153 (332)
|.|++|+++++.++++|+|++| .+||+|||+|++.|+|+||++|+++.++..++++||++++++|.++|..+
T Consensus 148 E~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~ 227 (427)
T 3dwl_A 148 ESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDR 227 (427)
T ss_dssp TTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC--
T ss_pred HhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHc
Confidence 9999999999999999999998 68999999999999999999999999999999999999999999999887
Q ss_pred CCCccchhHHHHHHHHHHHcccccccHHHHHHHhccCCCccceEEC--CCCc--eEeeCCccccccccCCCCccCCCc-C
Q 020045 154 GYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL--PDGQ--VITIGAERFRCPEVLFQPSMIGME-A 228 (332)
Q Consensus 154 ~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~l--p~~~--~i~i~~~~~~~~E~lf~p~~~~~~-~ 228 (332)
+.. ..+.+++++||+++||++.|+.++++...........|.+ |||+ .+.++.+||.+||+||+|++++.+ .
T Consensus 228 ~~~---~~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~ 304 (427)
T 3dwl_A 228 NEP---DSSLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFL 304 (427)
T ss_dssp ---------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCC
T ss_pred CCC---chhHHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccC
Confidence 765 3467899999999999999999888766543334566777 8887 788899999999999999999988 4
Q ss_pred CChHHHHHHHHhcCCHHHHHHHhcCcccccCccCCcChHHHHHHHHHhhC--------------CCCceEEEECCCCCcc
Q 020045 229 AGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALA--------------PSSMKIKVVAPPERKY 294 (332)
Q Consensus 229 ~~l~~~i~~~i~~~~~~~r~~l~~nIvl~GG~s~i~G~~erl~~eL~~~~--------------~~~~~v~v~~~~~~~~ 294 (332)
.+|+++|.++|.+||+|+|+.|++|||||||+|++|||.+||++||+.+. |...+++|..++++.+
T Consensus 305 ~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~ 384 (427)
T 3dwl_A 305 TPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRN 384 (427)
T ss_dssp SCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTT
T ss_pred CCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCcccc
Confidence 89999999999999999999999999999999999999999999999887 4566799999999999
Q ss_pred ccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 020045 295 SVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 332 (332)
Q Consensus 295 ~~w~Gasi~a~l~~~~~~~itr~ey~e~G~~~i~~k~~ 332 (332)
++|.||||+|++++|+++||||+||+|+|+++++|+++
T Consensus 385 s~WiGGSilasl~~f~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 385 AVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp HHHHHHHHHHHSTTHHHHSEEHHHHHHSCGGGGSCCCC
T ss_pred ceecCceeeccccchhheeEEHHHHhhhChHhheeccc
Confidence 99999999999999999999999999999999999985
|
| >3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... | Back alignment and structure |
|---|
| >1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* | Back alignment and structure |
|---|
| >4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A | Back alignment and structure |
|---|
| >4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* | Back alignment and structure |
|---|
| >1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A | Back alignment and structure |
|---|
| >3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} | Back alignment and structure |
|---|
| >2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} | Back alignment and structure |
|---|
| >1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 | Back alignment and structure |
|---|
| >3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... | Back alignment and structure |
|---|
| >1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* | Back alignment and structure |
|---|
| >2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} | Back alignment and structure |
|---|
| >3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* | Back alignment and structure |
|---|
| >2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* | Back alignment and structure |
|---|
| >4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} | Back alignment and structure |
|---|
| >4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* | Back alignment and structure |
|---|
| >4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D | Back alignment and structure |
|---|
| >2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A | Back alignment and structure |
|---|
| >3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} | Back alignment and structure |
|---|
| >2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A | Back alignment and structure |
|---|
| >1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 | Back alignment and structure |
|---|
| >4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A | Back alignment and structure |
|---|
| >2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 | Back alignment and structure |
|---|
| >1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 | Back alignment and structure |
|---|
| >2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* | Back alignment and structure |
|---|
| >2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
| >3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
| >3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A | Back alignment and structure |
|---|
| >3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* | Back alignment and structure |
|---|
| >1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* | Back alignment and structure |
|---|
| >2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
| >4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} | Back alignment and structure |
|---|
| >3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} | Back alignment and structure |
|---|
| >3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
| >3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 332 | ||||
| d2fxua2 | 225 | c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxI | 1e-117 | |
| d1k8ka2 | 258 | c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 | 1e-107 | |
| d1k8kb1 | 190 | c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 | 2e-81 | |
| d2fxua1 | 140 | c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: | 8e-52 | |
| d1k8ka1 | 158 | c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 { | 3e-51 |
| >d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Actin/HSP70 domain: Actin species: Cow (Bos taurus) [TaxId: 9913]
Score = 336 bits (863), Expect = e-117
Identities = 192/225 (85%), Positives = 210/225 (93%)
Query: 104 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAER 163
RTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSF TTAER
Sbjct: 1 RTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAER 60
Query: 164 EIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSM 223
EIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS
Sbjct: 61 EIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSF 120
Query: 224 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMK 283
IGME+AGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+PGIADRM KEITALAPS+MK
Sbjct: 121 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMK 180
Query: 284 IKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVH 328
IK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GPSIVH
Sbjct: 181 IKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 225
|
| >d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 258 | Back information, alignment and structure |
|---|
| >d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Length = 190 | Back information, alignment and structure |
|---|
| >d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 140 | Back information, alignment and structure |
|---|
| >d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 158 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 332 | |||
| d2fxua2 | 225 | Actin {Cow (Bos taurus) [TaxId: 9913]} | 100.0 | |
| d1k8ka2 | 258 | Actin-related protein 3, Arp3 {Cow (Bos taurus) [T | 100.0 | |
| d1k8kb1 | 190 | Actin-related protein 2, Arp2 {Cow (Bos taurus) [T | 100.0 | |
| d1k8ka1 | 158 | Actin-related protein 3, Arp3 {Cow (Bos taurus) [T | 99.85 | |
| d2fxua1 | 140 | Actin {Cow (Bos taurus) [TaxId: 9913]} | 99.81 | |
| d1e4ft2 | 191 | Cell division protein FtsA {Thermotoga maritima [T | 99.46 | |
| d1jcea2 | 196 | Prokaryotic actin homolog MreB {Thermotoga maritim | 99.33 | |
| d1dkgd2 | 198 | Heat shock protein 70kDa, ATPase fragment {Escheri | 99.03 | |
| d1bupa2 | 193 | Heat shock protein 70kDa, ATPase fragment {Cow (Bo | 98.84 | |
| d2zgya2 | 163 | Plasmid segregation protein ParM {Escherichia coli | 98.75 | |
| d2fsja1 | 161 | Hypothetical protein Ta0583 {Archaeon Thermoplasma | 98.43 | |
| d1jcea1 | 137 | Prokaryotic actin homolog MreB {Thermotoga maritim | 98.03 | |
| d1bupa1 | 185 | Heat shock protein 70kDa, ATPase fragment {Cow (Bo | 96.3 | |
| d1dkgd1 | 183 | Heat shock protein 70kDa, ATPase fragment {Escheri | 95.66 | |
| d2d0oa3 | 203 | Diol dehydratase-reactivating factor large subunit | 94.55 | |
| d1nbwa3 | 202 | ATPase domain of the glycerol dehydratase reactiva | 94.53 | |
| d1huxa_ | 259 | Hydroxyglutaryl-CoA dehydratase component A {Acida | 92.2 | |
| d1u6za3 | 177 | Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 | 91.3 | |
| d1t6ca2 | 180 | Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 | 91.3 | |
| d2i7na2 | 212 | Pantothenate kinase 1, PANK1 {Human (Homo sapiens) | 85.2 | |
| d1z05a2 | 197 | Transcriptional regulator VC2007 {Vibrio cholerae | 81.79 | |
| d2ewsa1 | 267 | Type II pantothenate kinase, CoaW {Staphylococcus | 81.08 | |
| d2hoea2 | 169 | N-acetylglucosamine kinase {Thermotoga maritima [T | 81.07 |
| >d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Actin/HSP70 domain: Actin species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=7.3e-54 Score=370.02 Aligned_cols=225 Identities=85% Similarity=1.342 Sum_probs=216.4
Q ss_pred CceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHHcccccccHHHH
Q 020045 104 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE 183 (332)
Q Consensus 104 ~~t~lVVDiG~~~t~v~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~ 183 (332)
++||||||+|++.|+|+||+||++++++..++++||++++++|.++|..++.......+.+.++++|+..|+++.|+..+
T Consensus 1 rtTglVVDiG~~~t~v~PV~eG~~l~~~~~~~~~GG~~lt~~l~~~L~~~~~~~~~~~~~~~~~~~ke~~~~~~~d~~~e 80 (225)
T d2fxua2 1 RTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENE 80 (225)
T ss_dssp CSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHH
T ss_pred CCEEEEEEcCCCcEEEEEEECCEEchhceEEEECcHHHHHHHHHHHHhhccCCcCCHHHHHHHHHHHHHHhhcccchhHH
Confidence 57999999999999999999999999999999999999999999999999998888788899999999999999999888
Q ss_pred HHHhccCCCccceEECCCCceEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHHhcCcccccCccCC
Q 020045 184 LETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF 263 (332)
Q Consensus 184 ~~~~~~~~~~~~~~~lp~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~i~~~i~~~~~~~r~~l~~nIvl~GG~s~i 263 (332)
.......+.....|.+|||+.+.++.+|+.+||.||+|..++.+..+|+++|.++|.+||+|.|+.|++||+||||+|++
T Consensus 81 ~~~~~~~~~~~~~~~lpdg~~i~i~~er~~~~E~lF~p~~~~~~~~gl~~~i~~sI~~~~~d~r~~l~~nIvl~GG~s~~ 160 (225)
T d2fxua2 81 MATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 160 (225)
T ss_dssp HHHHHHCSTTCEEEECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCS
T ss_pred HhhcccCcccceeEECCCCCEEEEchHhccccHhhcCccccCCccCChhHHHHHHhhcCCcchhhhhhcCEEEeCCcccC
Confidence 88777777788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCcccc
Q 020045 264 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVH 328 (332)
Q Consensus 264 ~G~~erl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~ey~e~G~~~i~ 328 (332)
|||.+||++||..+.+...++++..+++|++++|+|||++|++++|+++||||+||+|+|+++||
T Consensus 161 ~G~~~RL~~El~~~~~~~~~~~v~~~~~~~~~aW~Ggsilasl~~f~~~~itk~eY~E~G~~ivh 225 (225)
T d2fxua2 161 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 225 (225)
T ss_dssp TTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC
T ss_pred CchhHHHHhHHHHhhccccceEEecCCCCCeeEEeCHhhhhcCccHhhEEEEHHHHHhhCccccC
Confidence 99999999999999999889999999999999999999999999999999999999999999986
|
| >d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} | Back information, alignment and structure |
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| >d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
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| >d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} | Back information, alignment and structure |
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| >d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]} | Back information, alignment and structure |
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| >d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
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| >d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} | Back information, alignment and structure |
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| >d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
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| >d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
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| >d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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