Citrus Sinensis ID: 020050

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330--
MNRSFTKFGGHFLFAIFFVLCLGVKSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDSEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRAVNSLTEI
cccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHcccccccccccHHHHHHHHHHccccccccHHccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHcccccccHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHcccccccEccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccEcccHHHccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccEcccEcccccHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHHHHHccEEEHHHcHHHcccccccccccccccHHHHHHHHHHccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHccccccccHHHHHHHHHcHHHHHHHHHHHHHHHcccEcEcccccEcccccccccccccc
mnrsftkfgGHFLFAIFFVLCLGVksqlstnfysktcpnVLQIVRREVQKAIKVEMRMAASLIRLHFhdcfvngcdasvlldgsdsekfaapnrnsargFEVIDAIKTAVERQCSGVVSCADILAIAARDSvllsggptwkVLLGRRdglvanqtganalpspfeglNILTAKFAAVGlnitdlvslsggahtiglAKCAffsnrlsnfsgtgapdatmdTSLVSELRSLcangdgnntapldrnsidlfdnhyfqnlinnkgllssdqilyssdeakSTTKSLVESYSSNSNLFFANFVNSMIkmgnvspltgtngeirkncravnsltei
MNRSFTKFGGHFLFAIFFVLCLGVKSQLSTNFysktcpnvlQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDSEKfaapnrnsargFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVspltgtngeirkncravnsltei
MNRSFTKFGGHFLFAIFFVLCLGVKSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDSEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRAVNSLTEI
****FTKFGGHFLFAIFFVLCLGVKSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDG*************ARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFS****************LRSLCA********PLDRNSIDLFDNHYFQNLINNKGLLSSDQILY*******************SNLFFANFVNSMIKMGNVSPLT*******************
**********HFLFAIFFVLCLGVKSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDSEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRS*CA***GNNTAPLDRNSIDLFDNHYFQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRAVNS****
MNRSFTKFGGHFLFAIFFVLCLGVKSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDSEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLLSSDQILYSSD***********SYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRAVNSLTEI
**RSFTKFGGHFLFAIFFVLCLGVKSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDSEKFA***RNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRAVN*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNRSFTKFGGHFLFAIFFVLCLGVKSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDSEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCANGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRAVNSLTEI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query332 2.2.26 [Sep-21-2011]
Q42517327 Peroxidase N OS=Armoracia N/A no 0.954 0.969 0.653 1e-120
Q39034328 Peroxidase 59 OS=Arabidop yes no 0.954 0.966 0.656 1e-120
Q9FG34358 Peroxidase 54 OS=Arabidop no no 0.948 0.879 0.561 5e-97
P80679305 Peroxidase A2 OS=Armoraci N/A no 0.897 0.977 0.591 2e-96
Q42578335 Peroxidase 53 OS=Arabidop no no 0.948 0.940 0.561 7e-96
Q9LEH3327 Peroxidase 15 OS=Ipomoea N/A no 0.924 0.938 0.569 1e-93
O23237331 Peroxidase 49 OS=Arabidop no no 0.927 0.930 0.521 5e-87
Q9SI16338 Peroxidase 15 OS=Arabidop no no 0.945 0.928 0.497 3e-86
O80912349 Peroxidase 23 OS=Arabidop no no 0.915 0.871 0.530 1e-85
Q9SI17337 Peroxidase 14 OS=Arabidop no no 0.906 0.893 0.522 3e-85
>sp|Q42517|PERN_ARMRU Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1 Back     alignment and function desciption
 Score =  432 bits (1112), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/323 (65%), Positives = 260/323 (80%), Gaps = 6/323 (1%)

Query: 8   FGGHFLFAIFFV--LCLGVKSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRL 65
            GGH L  +F +  LC  V++QLS + Y+K+CPN+LQIVR +V+ A+K E+RMAASLIRL
Sbjct: 8   MGGHVLLTVFTLCMLCSAVRAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRL 67

Query: 66  HFHDCFVNGCDASVLLDGSDSEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILA 125
           HFHDCFVNGCDASVLLDG++SEK A PN NS RGFEVID IK AVE  C GVVSCADIL 
Sbjct: 68  HFHDCFVNGCDASVLLDGTNSEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILT 127

Query: 126 IAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLV 185
           +AARDSV LSGGP W+V LGR+DGLVANQ+ AN LPSPFE L+ + AKFAAVGLN+TD+V
Sbjct: 128 LAARDSVYLSGGPQWRVALGRKDGLVANQSSANNLPSPFEPLDAIIAKFAAVGLNVTDVV 187

Query: 186 SLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDR 244
           +LS GAHT G AKC  FSNRL NF+G G PD+T++T+L+S+L+++C   G+GN TAPLDR
Sbjct: 188 ALS-GAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPLDR 246

Query: 245 NSIDLFDNHYFQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMI 304
           NS D FDN+YF+NL+  KGLLSSDQIL+SSD A +TTK LVE+YS +  LFF +F  SMI
Sbjct: 247 NSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFTCSMI 306

Query: 305 KMGNVSPLTGTNGEIRKNCRAVN 327
           +MG++  + G +GE+R NCR +N
Sbjct: 307 RMGSL--VNGASGEVRTNCRVIN 327
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Armoracia rusticana (taxid: 3704)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q39034|PER59_ARATH Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2 Back     alignment and function description
>sp|Q9FG34|PER54_ARATH Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1 Back     alignment and function description
>sp|P80679|PERA2_ARMRU Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1 Back     alignment and function description
>sp|Q42578|PER53_ARATH Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1 Back     alignment and function description
>sp|Q9LEH3|PER15_IPOBA Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1 Back     alignment and function description
>sp|O23237|PER49_ARATH Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2 Back     alignment and function description
>sp|Q9SI16|PER15_ARATH Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1 Back     alignment and function description
>sp|O80912|PER23_ARATH Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1 Back     alignment and function description
>sp|Q9SI17|PER14_ARATH Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query332
224073200309 predicted protein [Populus trichocarpa] 0.924 0.993 0.753 1e-130
225435616332 PREDICTED: peroxidase N [Vitis vinifera] 0.966 0.966 0.705 1e-127
359807658330 uncharacterized protein LOC100787073 pre 0.984 0.990 0.691 1e-127
356561903332 PREDICTED: peroxidase N-like [Glycine ma 0.984 0.984 0.684 1e-125
255647948332 unknown [Glycine max] 0.984 0.984 0.681 1e-124
449503592334 PREDICTED: peroxidase N-like [Cucumis sa 0.975 0.970 0.665 1e-124
449448780334 PREDICTED: peroxidase N-like [Cucumis sa 0.975 0.970 0.665 1e-124
356561911331 PREDICTED: peroxidase N-like [Glycine ma 0.984 0.987 0.670 1e-121
297812173328 peroxidase [Arabidopsis lyrata subsp. ly 0.954 0.966 0.674 1e-121
356530407326 PREDICTED: LOW QUALITY PROTEIN: peroxida 0.972 0.990 0.654 1e-120
>gi|224073200|ref|XP_002304020.1| predicted protein [Populus trichocarpa] gi|222841452|gb|EEE78999.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 235/312 (75%), Positives = 269/312 (86%), Gaps = 5/312 (1%)

Query: 19  VLCLGVKSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDAS 78
           +LC+  +SQL+T+FYS TCPN+LQIVRREVQKAIK E RMAASLIRLHFHDCFVNGCDAS
Sbjct: 1   MLCVVARSQLTTDFYSTTCPNLLQIVRREVQKAIKFETRMAASLIRLHFHDCFVNGCDAS 60

Query: 79  VLLDGSDSEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGP 138
           VLLDG+D EKFA PN NSARGFEV+DAIKTAVE QCSGVVSCADIL IAARDSVLLSGG 
Sbjct: 61  VLLDGNDGEKFALPNINSARGFEVVDAIKTAVESQCSGVVSCADILTIAARDSVLLSGGK 120

Query: 139 TWKVLLGRRDGLVANQTGANA-LPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLA 197
           +W+VLLGRRDGLVANQTGANA LPSPFE ++ +  KFAAVGLNI D+V+LS GAHTIG A
Sbjct: 121 SWRVLLGRRDGLVANQTGANAKLPSPFEDVDTIINKFAAVGLNIIDVVALS-GAHTIGQA 179

Query: 198 KCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQ 256
           +CA F+NRL NFSGTGAPD+TM++S+VS+L++LC    DGN T  LDRNS DLFD HYFQ
Sbjct: 180 RCATFNNRLFNFSGTGAPDSTMESSMVSDLQNLCPLTDDGNKTTVLDRNSTDLFDIHYFQ 239

Query: 257 NLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTN 316
           NL+NNKGLLSSDQ L+SS     TTK+LV++YS+N NLF  +F NSMIKMGN+SPLTG++
Sbjct: 240 NLLNNKGLLSSDQELFSS--TNLTTKALVQTYSTNQNLFLNDFANSMIKMGNISPLTGSS 297

Query: 317 GEIRKNCRAVNS 328
           GEIRK C  VNS
Sbjct: 298 GEIRKKCSVVNS 309

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225435616|ref|XP_002285642.1| PREDICTED: peroxidase N [Vitis vinifera] Back     alignment and taxonomy information
>gi|359807658|ref|NP_001240914.1| uncharacterized protein LOC100787073 precursor [Glycine max] gi|255641066|gb|ACU20812.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356561903|ref|XP_003549216.1| PREDICTED: peroxidase N-like [Glycine max] Back     alignment and taxonomy information
>gi|255647948|gb|ACU24431.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449503592|ref|XP_004162079.1| PREDICTED: peroxidase N-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449448780|ref|XP_004142143.1| PREDICTED: peroxidase N-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356561911|ref|XP_003549220.1| PREDICTED: peroxidase N-like [Glycine max] Back     alignment and taxonomy information
>gi|297812173|ref|XP_002873970.1| peroxidase [Arabidopsis lyrata subsp. lyrata] gi|297319807|gb|EFH50229.1| peroxidase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356530407|ref|XP_003533773.1| PREDICTED: LOW QUALITY PROTEIN: peroxidase 59-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query332
TAIR|locus:2147645328 AT5G19890 [Arabidopsis thalian 0.963 0.975 0.654 1.1e-110
TAIR|locus:2170214358 AT5G06730 [Arabidopsis thalian 0.948 0.879 0.561 4.5e-91
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 0.948 0.940 0.567 2.5e-90
UNIPROTKB|Q9LEH3327 pod "Peroxidase 15" [Ipomoea b 0.924 0.938 0.569 1.1e-87
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.939 0.942 0.529 2.2e-80
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.909 0.893 0.520 6e-80
TAIR|locus:2057165349 AT2G38390 [Arabidopsis thalian 0.900 0.856 0.538 8.7e-79
TAIR|locus:2053139337 AT2G18140 [Arabidopsis thalian 0.909 0.896 0.520 1.8e-78
TAIR|locus:2057180349 AT2G38380 [Arabidopsis thalian 0.900 0.856 0.551 6.2e-78
TAIR|locus:2138273346 Prx37 "peroxidase 37" [Arabido 0.981 0.942 0.511 9e-77
TAIR|locus:2147645 AT5G19890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
 Identities = 214/327 (65%), Positives = 263/327 (80%)

Query:     6 TK-FGGHFLFAIFFV--LCLGVKSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASL 62
             TK  GGH L  +F +  LC GV++QLS + Y+K+CPN++QIVR++V  A+K E+RMAASL
Sbjct:     5 TKVMGGHVLLTVFTLCMLCSGVRAQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASL 64

Query:    63 IRLHFHDCFVNGCDASVLLDGSDSEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCAD 122
             IRLHFHDCFVNGCDAS+LLDG+DSEK A PN NSARGFEVID IK AVE  C GVVSCAD
Sbjct:    65 IRLHFHDCFVNGCDASLLLDGADSEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCAD 124

Query:   123 ILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNIT 182
             IL +AARDSV+LSGGP W+V LGR+DGLVANQ  AN LPSPFE L+ + AKF AV LNIT
Sbjct:   125 ILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNIT 184

Query:   183 DLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAP 241
             D+V+LSG AHT G AKCA FSNRL NF+G G PDAT++TSL+S L+++C   G+ N TAP
Sbjct:   185 DVVALSG-AHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAP 243

Query:   242 LDRNSIDLFDNHYFQNLINNKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVN 301
             LDR++ D FDN+YF+NL+  KGLLSSDQIL+SSD A +TTK LVE+YS + +LFF +F  
Sbjct:   244 LDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTC 303

Query:   302 SMIKMGNVSPLTGTNGEIRKNCRAVNS 328
             +MI+MGN+S   G +GE+R NCR +N+
Sbjct:   304 AMIRMGNIS--NGASGEVRTNCRVINN 328
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005634 "nucleus" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
TAIR|locus:2170214 AT5G06730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9LEH3 pod "Peroxidase 15" [Ipomoea batatas (taxid:4120)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057165 AT2G38390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057180 AT2G38380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138273 Prx37 "peroxidase 37" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P22195PER1_ARAHY1, ., 1, 1, ., 1, ., 70.50470.90960.9556N/Ano
P17180PER3_ARMRU1, ., 1, 1, ., 1, ., 70.55010.90360.8595N/Ano
Q39034PER59_ARATH1, ., 1, 1, ., 1, ., 70.65630.95480.9664yesno
P59121PERE5_ARMRU1, ., 1, 1, ., 1, ., 70.55510.90060.9771N/Ano
Q42517PERN_ARMRU1, ., 1, 1, ., 1, ., 70.65320.95480.9694N/Ano
A2YPX3PER2_ORYSI1, ., 1, 1, ., 1, ., 70.50660.84930.8980N/Ano
P80679PERA2_ARMRU1, ., 1, 1, ., 1, ., 70.59150.89750.9770N/Ano
P00434PERP7_BRARA1, ., 1, 1, ., 1, ., 70.51630.87650.9831N/Ano
Q9LEH3PER15_IPOBA1, ., 1, 1, ., 1, ., 70.56960.92460.9388N/Ano
P17179PER2_ARMRU1, ., 1, 1, ., 1, ., 70.52390.91860.8789N/Ano
P00433PER1A_ARMRU1, ., 1, 1, ., 1, ., 70.52420.90660.8526N/Ano
A5H452PER70_MAIZE1, ., 1, 1, ., 1, ., 70.50330.86440.8940N/Ano
P15233PER1C_ARMRU1, ., 1, 1, ., 1, ., 70.52750.90660.9066N/Ano
P15232PER1B_ARMRU1, ., 1, 1, ., 1, ., 70.52100.90660.8575N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.991
3rd Layer1.11.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_III1873
hypothetical protein (309 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XIV.3012.1
aspartate transaminase (EC-2.6.1.1) (403 aa)
     •  0.899
gw1.VI.2755.1
aspartate transaminase (EC-2.6.1.1) (397 aa)
     •  0.899
gw1.41.216.1
histidinol-phosphate aminotransferase (366 aa)
     •  0.899
gw1.28.655.1
annotation not avaliable (78 aa)
     •  0.899
f5h
SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa)
     •  0.899
grail3.0013044701
aspartate transaminase (EC-2.6.1.1) (466 aa)
     •  0.899
PAL
RecName- Full=Phenylalanine ammonia-lyase; EC=4.3.1.24;; This is a key enzyme of plant metaboli [...] (715 aa)
     •  0.899
SAD
SubName- Full=Cinnamyl alcohol dehydrogenase; (362 aa)
     •  0.899
fgenesh4_pg.C_scaffold_803000002
hypothetical protein (316 aa)
     •  0.899
AMT7
aminotransferase family protein (EC-2.6.1.5) (407 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-171
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 1e-98
pfam00141180 pfam00141, peroxidase, Peroxidase 7e-69
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 2e-33
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 3e-16
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 1e-08
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 2e-08
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 3e-08
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 1e-07
cd00692328 cd00692, ligninase, Ligninase and other manganese- 2e-04
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  477 bits (1230), Expect = e-171
 Identities = 168/304 (55%), Positives = 218/304 (71%), Gaps = 10/304 (3%)

Query: 27  QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGS-- 84
           QLS  FYSK+CPN   IVR  V+ A+K + R+AA+L+RLHFHDCFV GCDASVLLD +  
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 85  -DSEKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVL 143
             SEK A PN  S RGF+VID IK A+E  C GVVSCADILA+AARD+V+L+GGP+++V 
Sbjct: 61  NTSEKDAPPNL-SLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVP 119

Query: 144 LGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFS 203
           LGRRDG V++      LPSPF  ++ L + FA+ GL +TDLV+LS GAHTIG A C+ FS
Sbjct: 120 LGRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALS-GAHTIGRAHCSSFS 178

Query: 204 NRLSNFSGTGAPDATMDTSLVSELRSLC-ANGDGNNTAPLDRNSIDLFDNHYFQNLINNK 262
           +RL NFSGTG PD T+D +  ++LR  C A GD +   PLD  + + FDN Y++NL+  +
Sbjct: 179 DRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR 238

Query: 263 GLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKN 322
           GLL+SDQ L S       T+++V  Y++N + FF +F  +M+KMGN+  LTG+ GEIRKN
Sbjct: 239 GLLTSDQALLSD----PRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKN 294

Query: 323 CRAV 326
           CR V
Sbjct: 295 CRVV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 332
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 100.0
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.63
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.7e-105  Score=764.82  Aligned_cols=297  Identities=49%  Similarity=0.830  Sum_probs=282.4

Q ss_pred             CCCCCcCcccCCChhHHHHHHHHHHHHHHhchhhhHHHHHHHhhcccccCCCcccccCCCcccccccCCCCchhHHHHHH
Q 020050           25 KSQLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDSEKFAAPNRNSARGFEVID  104 (332)
Q Consensus        25 ~~~l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~~E~~~~~N~~~~~g~~~I~  104 (332)
                      +++|+++||++|||++|+||++.|++++.++++++|++|||+||||||+||||||||++...||++++|. +++||++|+
T Consensus        22 ~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~~Ek~a~~N~-~l~Gf~~i~  100 (324)
T PLN03030         22 GQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSNTEKTALPNL-LLRGYDVID  100 (324)
T ss_pred             hccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCcccccCCCCc-CcchHHHHH
Confidence            3679999999999999999999999999999999999999999999999999999998767899999998 689999999


Q ss_pred             HHHHHHHhhCCCCcchhHHHHHhhhhhccccCCCcceeecCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHcCCCcccc
Q 020050          105 AIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDL  184 (332)
Q Consensus       105 ~iK~~le~~cp~~VScADilalAa~~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~  184 (332)
                      .||+++|++||++||||||||+||||||+++|||.|+|++||||+++|...++.+||.|+.++++|++.|+++||+.+||
T Consensus       101 ~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~Dl  180 (324)
T PLN03030        101 DAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGLNTQDL  180 (324)
T ss_pred             HHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHcCCCHHHh
Confidence            99999999999999999999999999999999999999999999999876544489999999999999999999999999


Q ss_pred             ccccCccceecccccccccccccCCCCCC-CCCCCCCHHHHHHHHhhcC-CCCCCCCCCCCCCCccccchHHHHHHhhcc
Q 020050          185 VSLSGGAHTIGLAKCAFFSNRLSNFSGTG-APDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLINNK  262 (332)
Q Consensus       185 VaLsGgaHTiG~~hc~~f~~Rl~~~~g~~-~~dp~~d~~~~~~L~~~Cp-~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~~  262 (332)
                      |+||| |||||++||.+|.+|||||.+++ .+||+||++|+..|++.|| +++..+.+++|+.||.+|||+||++|+.++
T Consensus       181 VaLsG-AHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll~~r  259 (324)
T PLN03030        181 VTLVG-GHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNLKNGR  259 (324)
T ss_pred             eeeee-ccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHHHhcC
Confidence            99999 99999999999999999999875 5899999999999999999 333344688999999999999999999999


Q ss_pred             ccccchhhhhcCCccchhHHHHHHHhhhCh----HHHHHHHHHHHHHhhcCCCCCCCCCcccccccccc
Q 020050          263 GLLSSDQILYSSDEAKSTTKSLVESYSSNS----NLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRAVN  327 (332)
Q Consensus       263 gll~SD~~L~~d~~~~~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tG~~GeiR~~C~~~n  327 (332)
                      |+|+|||+|++|+    +|+++|++||.|+    +.|+++|++||+|||+|+|+||.+|||||+|+++|
T Consensus       260 GlL~SDq~L~~d~----~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        260 GILESDQKLWTDA----STRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             CCcCCchHhhcCc----cHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            9999999999999    9999999999875    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 1e-116
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 1e-96
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 9e-90
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 1e-80
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 2e-80
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 2e-80
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 2e-80
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 2e-80
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 3e-80
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 4e-80
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 7e-80
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 8e-80
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 2e-79
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 3e-79
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 1e-78
1sch_A294 Peanut Peroxidase Length = 294 3e-78
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 2e-77
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 3e-61
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 1e-56
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 4e-10
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 9e-09
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 1e-08
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 1e-08
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-08
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 2e-08
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 2e-08
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 2e-08
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 2e-08
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 3e-08
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 3e-08
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 3e-08
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 2e-07
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 2e-07
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 2e-07
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 6e-07
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure 
Iteration: 1

 Score =  414 bits (1064), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/302 (67%), Positives = 247/302 (81%), Gaps = 4/302 (1%)
Query: 27  QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
           QLS + Y+K+CPN++QIVR++V  A+K E+RMAASLIRLHFHDCFVNGCDAS+LLDG+DS
Sbjct: 1   QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS 60
Query: 87  EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGR 146
           EK A PN NSARGFEVID IK AVE  C GVVSCADIL +AARDSV+LSGGP W+V LGR
Sbjct: 61  EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGR 120
Query: 147 RDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRL 206
           +DGLVANQ  AN LPSPFE L+ + AKF AV LNITD+V+LS GAHT G AKCA FSNRL
Sbjct: 121 KDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALS-GAHTFGQAKCAVFSNRL 179
Query: 207 SNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLL 265
            NF+G G PDAT++TSL+S L+++C   G+ N TAPLDR++ D FDN+YF+NL+  KGLL
Sbjct: 180 FNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLL 239
Query: 266 SSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRA 325
           SSDQIL+SSD A +TTK LVE+YS + +LFF +F  +MI+MGN+S   G +GE+R NCR 
Sbjct: 240 SSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRV 297
Query: 326 VN 327
           +N
Sbjct: 298 IN 299
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 0.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 0.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 0.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 0.0
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 0.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-177
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-173
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 7e-93
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 2e-70
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 6e-68
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 3e-67
2e39_A344 Peroxidase; heme protein, coordination geometry of 4e-63
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 5e-59
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 4e-58
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 4e-15
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
 Score =  527 bits (1360), Expect = 0.0
 Identities = 203/303 (66%), Positives = 248/303 (81%), Gaps = 4/303 (1%)

Query: 27  QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
           QLS + Y+K+CPN++QIVR++V  A+K E+RMAASLIRLHFHDCFVNGCDAS+LLDG+DS
Sbjct: 1   QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS 60

Query: 87  EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGR 146
           EK A PN NSARGFEVID IK AVE  C GVVSCADIL +AARDSV+LSGGP W+V LGR
Sbjct: 61  EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGR 120

Query: 147 RDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRL 206
           +DGLVANQ  AN LPSPFE L+ + AKF AV LNITD+V+LS GAHT G AKCA FSNRL
Sbjct: 121 KDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALS-GAHTFGQAKCAVFSNRL 179

Query: 207 SNFSGTGAPDATMDTSLVSELRSLC-ANGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLL 265
            NF+G G PDAT++TSL+S L+++C   G+ N TAPLDR++ D FDN+YF+NL+  KGLL
Sbjct: 180 FNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLL 239

Query: 266 SSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRA 325
           SSDQIL+SSD A +TTK LVE+YS + +LFF +F  +MI+MGN+S   G +GE+R NCR 
Sbjct: 240 SSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRV 297

Query: 326 VNS 328
           +N+
Sbjct: 298 INN 300
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query332
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1.2e-107  Score=778.01  Aligned_cols=296  Identities=45%  Similarity=0.715  Sum_probs=286.0

Q ss_pred             CCcCcccCCChhHHHHHHHHHHHHHHhchhhhHHHHHHHhhcccccCCCcccccCC---CcccccccCCCCchhHHHHHH
Q 020050           28 LSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDG---SDSEKFAAPNRNSARGFEVID  104 (332)
Q Consensus        28 l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~---~~~E~~~~~N~~~~~g~~~I~  104 (332)
                      |+++||++|||++|+|||+.|++++.++++++|++|||+||||||+||||||||++   +.+|+++++|.++++||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999986   458999999986679999999


Q ss_pred             HHHHHHHhhCCCCcchhHHHHHhhhhhccccCCCcceeecCCCCCCCccccCCC-CCCCCCCCHHHHHHHHHHcCCCccc
Q 020050          105 AIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGAN-ALPSPFEGLNILTAKFAAVGLNITD  183 (332)
Q Consensus       105 ~iK~~le~~cp~~VScADilalAa~~aV~~~GGP~~~v~~GR~D~~~s~~~~~~-~lP~p~~~~~~l~~~F~~~Gl~~~e  183 (332)
                      +||++||+.||++||||||||||||+||+++|||.|+|++||+|++++....++ +||.|+.++++|++.|++|||+++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            999999999999999999999999999999999999999999999999887777 8999999999999999999999999


Q ss_pred             cccccCccceecccccccccccccCCCCCCCCCCCCCHHHHHHHHhhcC-CCC--CCCCCCCCCCCccccchHHHHHHhh
Q 020050          184 LVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGD--GNNTAPLDRNSIDLFDNHYFQNLIN  260 (332)
Q Consensus       184 ~VaLsGgaHTiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp-~~~--~~~~~~lD~~tp~~FDN~Yy~~ll~  260 (332)
                      |||||| |||||++||.+|.+|+|||+|++.+||+||+.|++.|++.|| .++  +++.++||+.||.+|||+||++|+.
T Consensus       162 ~VaLsG-aHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~  240 (304)
T 3hdl_A          162 MVTLSG-AHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQL  240 (304)
T ss_dssp             HHHHGG-GGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHT
T ss_pred             hhhhhc-cccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHHh
Confidence            999999 999999999999999999999989999999999999999999 445  6778899999999999999999999


Q ss_pred             ccccccchhhhhcCCccchhHHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCccccccccccc
Q 020050          261 NKGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRAVNS  328 (332)
Q Consensus       261 ~~gll~SD~~L~~d~~~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tG~~GeiR~~C~~~n~  328 (332)
                      ++|||+|||+|+.|+    +|+++|+.||.|+++|+++|++||+||++|+|+||.+||||++|+++|+
T Consensus       241 ~~glL~SDq~L~~d~----~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N~  304 (304)
T 3hdl_A          241 TLGLLTSDQALVTEA----NLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVNS  304 (304)
T ss_dssp             TCCCSHHHHGGGSSH----HHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC-
T ss_pred             CcCCCCCCHHHhcCc----cHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccCC
Confidence            999999999999999    9999999999999999999999999999999999999999999999994
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 332
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-134
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-128
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-126
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-122
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-113
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-112
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 5e-66
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 3e-65
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 3e-65
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 1e-46
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 4e-46
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 5e-43
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]

 Score =  382 bits (981), Expect = e-134
 Identities = 203/303 (66%), Positives = 248/303 (81%), Gaps = 4/303 (1%)

Query: 27  QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDGSDS 86
           QLS + Y+K+CPN++QIVR++V  A+K E+RMAASLIRLHFHDCFVNGCDAS+LLDG+DS
Sbjct: 1   QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS 60

Query: 87  EKFAAPNRNSARGFEVIDAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGR 146
           EK A PN NSARGFEVID IK AVE  C GVVSCADIL +AARDSV+LSGGP W+V LGR
Sbjct: 61  EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGR 120

Query: 147 RDGLVANQTGANALPSPFEGLNILTAKFAAVGLNITDLVSLSGGAHTIGLAKCAFFSNRL 206
           +DGLVANQ  AN LPSPFE L+ + AKF AV LNITD+V+LS GAHT G AKCA FSNRL
Sbjct: 121 KDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALS-GAHTFGQAKCAVFSNRL 179

Query: 207 SNFSGTGAPDATMDTSLVSELRSLC-ANGDGNNTAPLDRNSIDLFDNHYFQNLINNKGLL 265
            NF+G G PDAT++TSL+S L+++C   G+ N TAPLDR++ D FDN+YF+NL+  KGLL
Sbjct: 180 FNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLL 239

Query: 266 SSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRA 325
           SSDQIL+SSD A +TTK LVE+YS + +LFF +F  +MI+MGN+S   G +GE+R NCR 
Sbjct: 240 SSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRV 297

Query: 326 VNS 328
           +N+
Sbjct: 298 INN 300
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query332
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1.1e-102  Score=744.11  Aligned_cols=298  Identities=55%  Similarity=0.871  Sum_probs=287.1

Q ss_pred             CCCcCcccCCChhHHHHHHHHHHHHHHhchhhhHHHHHHHhhcccccCCCcccccCC---CcccccccCCCCchhHHHHH
Q 020050           27 QLSTNFYSKTCPNVLQIVRREVQKAIKVEMRMAASLIRLHFHDCFVNGCDASVLLDG---SDSEKFAAPNRNSARGFEVI  103 (332)
Q Consensus        27 ~l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~---~~~E~~~~~N~~~~~g~~~I  103 (332)
                      ||+++||++|||++|+||+++|++++.+|++++|++|||+||||||+||||||||++   +.+|+++++|.++++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            699999999999999999999999999999999999999999999999999999986   56899999999888999999


Q ss_pred             HHHHHHHHhhCCCCcchhHHHHHhhhhhccccCCCcceeecCCCCCCCccccCCC-CCCCCCCCHHHHHHHHHHcCCCcc
Q 020050          104 DAIKTAVERQCSGVVSCADILAIAARDSVLLSGGPTWKVLLGRRDGLVANQTGAN-ALPSPFEGLNILTAKFAAVGLNIT  182 (332)
Q Consensus       104 ~~iK~~le~~cp~~VScADilalAa~~aV~~~GGP~~~v~~GR~D~~~s~~~~~~-~lP~p~~~~~~l~~~F~~~Gl~~~  182 (332)
                      |.||++||+.||++||||||||||||+||+.+|||.|+|++||+|+.+|+..++. +||.|+.++++|++.|++|||+.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            9999999999999999999999999999999999999999999999999887777 899999999999999999999999


Q ss_pred             ccccccCccceecccccccccccccCCCCCCCCCCCCCHHHHHHHHhhcC-CCCCCCCCCCCCCCccccchHHHHHHhhc
Q 020050          183 DLVSLSGGAHTIGLAKCAFFSNRLSNFSGTGAPDATMDTSLVSELRSLCA-NGDGNNTAPLDRNSIDLFDNHYFQNLINN  261 (332)
Q Consensus       183 e~VaLsGgaHTiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp-~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~  261 (332)
                      ||||||| |||||++||.+|..|+|+|.+++.+||++++.|+..|++.|| ++...+.+.+|..||.+|||+||++++.+
T Consensus       161 d~VaLsG-aHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~~  239 (304)
T d1fhfa_         161 DLVTLSG-GHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQL  239 (304)
T ss_dssp             HHHHHGG-GGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHHTT
T ss_pred             HHHHHhh-hhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHhhc
Confidence            9999999 999999999999999999999999999999999999999999 55556678899999999999999999999


Q ss_pred             cccccchhhhhcCCccchhHHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCcccccccccc
Q 020050          262 KGLLSSDQILYSSDEAKSTTKSLVESYSSNSNLFFANFVNSMIKMGNVSPLTGTNGEIRKNCRAVN  327 (332)
Q Consensus       262 ~gll~SD~~L~~d~~~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tG~~GeiR~~C~~~n  327 (332)
                      +|+|+|||+|+.||++  +|+++|+.||.|+++|+++|++||+||++|+||||.+||||++|+++|
T Consensus       240 ~glL~SD~~L~~dp~~--~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         240 NGLLQSDQELFSTPGA--DTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             CCSSHHHHTTTSSTTC--SSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             CcccHhhHHHHhCCCc--hHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            9999999999999732  799999999999999999999999999999999999999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure