Citrus Sinensis ID: 020069

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
Protein Sequence
MMASRVLSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccccHHHccccccccccccEEEEEEccEEcccccccccEEEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEEEEEccccccccHHHHHccccccccccccccccccccccccccccccccccccccccHHHccccccccHccHHHcccHHHccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccHcHcHEEEEccccccccccEEEEEEccEEEcccEEEEEEEEEEcccccccccccccc
Coil and Loop (DISEMBL)
MMASRVLSRATRCVGRRAlllvptsgkqhspalsnqFHSLVfespnkltqvsLFHQTTlnssifqrfgfssaspepnekeqgsapdnngaespkpnrdakdsvdnngaeapkpngdakasdegmeatdrtkesdsdseseIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLgrassvvkenflkidpsndtagaVPLLKSLLEGVEMTEKQLGEVFKKFgvekfdpinepfdphrhnamfqlpdnskppgtvaHVLKSGYTLYErvirpaevgVTQAVEndraenndqa
Flexible Loop (DISEMBL)
mmasrvlsratrcvgrRALLLvptsgkqhspALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGFSSASpepnekeqgsapdnngaespkpnrdakdsvdnngaeapkpngdakasdegmeatdrtkesdsdseseielsrddLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEnflkidpsndtagAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVgvtqavendraenndqa
Low Complexity Region (SEG)
MMASRVLSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKesdsdseseielsrddlvkllkereellmakNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA
Disordered region (IsUnstruct)
**********TRCVGRRALLLVP*************FHSLVFESPNKLTQVSLFHQTTLNSSIFQRFG*******************************************************************************************************************************KFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPI***********************TVAHVLKSGYTLYERVIRPAEVGVT**************
Disordered Region (DISOPRED)
***SR**SRATRCV**********************F***VF***N*LTQ**************************************************************************************************************AKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE**************VPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVG****************
Disordered Region (DISEMBL)
*********ATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGFS********************************VDNNGA**********************************LSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEN*********
Disordered Region (DISPRO)
*M**RV***ATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGF***********************************************************************IELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMASRVLSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESDSDSESEIELSRDDxxxxxxxxxxxxxxxxxxxxxxxxxVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	331	2.2.26 [Sep-21-2011]
Q3SW78	197	Protein GrpE OS=Nitrobact	yes	no	0.450	0.756	0.445	8e-34
Q6NCY6	207	Protein GrpE OS=Rhodopseu	yes	no	0.444	0.710	0.438	4e-32
B3Q970	207	Protein GrpE OS=Rhodopseu	yes	no	0.444	0.710	0.438	6e-32
Q07US4	207	Protein GrpE OS=Rhodopseu	yes	no	0.450	0.719	0.446	8e-32
A4YJR1	206	Protein GrpE OS=Bradyrhiz	yes	no	0.422	0.679	0.466	9e-32
B6JCI1	200	Protein GrpE OS=Oligotrop	yes	no	0.447	0.74	0.455	1e-31
Q79V15	201	Protein GrpE OS=Bradyrhiz	yes	no	0.441	0.726	0.461	1e-30
P38523	228	GrpE protein homolog, mit	yes	no	0.489	0.710	0.409	2e-30
P48604	213	GrpE protein homolog, mit	yes	no	0.513	0.798	0.410	2e-30
Q13E58	206	Protein GrpE OS=Rhodopseu	yes	no	0.438	0.703	0.437	2e-30

>sp|Q3SW78|GRPE_NITWN Protein GrpE OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=grpE PE=3 SV=1

 Score =  144 bits (364), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 106/157 (67%), Gaps = 8/157 (5%)

Query: 156 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGR 215
           ++ L A N+++ + +D+ LR+ AEMEN++ RT RE  +++ + I  FA+ +L++ADNL R
Sbjct: 34  DDALDALNKQLAEAKDRTLRTLAEMENLRKRTAREVSDARTYGISGFARDVLEIADNLQR 93

Query: 216 ASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDP 275
           A   V        P++  A   P LK+L+EGVE+TE+ L    +K GV+KFDP  E FDP
Sbjct: 94  ALDAV--------PADARAAPDPGLKALIEGVELTERSLHNALEKHGVKKFDPAGEKFDP 145

Query: 276 HRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPA 312
           + H AM+++PD S P GTVA V+++GY + ERV+RPA
Sbjct: 146 NVHQAMYEVPDPSIPVGTVAQVIQAGYMIGERVLRPA 182

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.
Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) (taxid: 323098)

>sp|Q6NCY6|GRPE_RHOPA Protein GrpE OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=grpE PE=3 SV=2

 Score =  139 bits (349), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 104/155 (67%), Gaps = 8/155 (5%)

Query: 165 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 224
           E    +DK+LR+ AEMEN++ RT +E  +++ + + +FA+ +LD+ADNL RA   V    
Sbjct: 44  EAADARDKMLRTLAEMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAV---- 99

Query: 225 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQL 284
               P++  A A P LK+L+EGVE+TE+ L    +K GV+KFDP  + FDP+   AM+++
Sbjct: 100 ----PADARANAEPGLKALIEGVELTERSLLNALEKNGVKKFDPKGQKFDPNFQQAMYEV 155

Query: 285 PDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 319
           PD S P GTV  V+++G+T+ +RV+RPA VGV + 
Sbjct: 156 PDPSVPAGTVVQVVQAGFTIGDRVLRPALVGVAKG 190

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) (taxid: 258594)

>sp|B3Q970|GRPE_RHOPT Protein GrpE OS=Rhodopseudomonas palustris (strain TIE-1) GN=grpE PE=3 SV=1

 Score =  138 bits (347), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 103/155 (66%), Gaps = 8/155 (5%)

Query: 165 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 224
           E    +DK+LR+ AEMEN++ RT +E  +++ + + +FA+ +LD+ADNL RA   V    
Sbjct: 44  EAADARDKMLRTLAEMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAV---- 99

Query: 225 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQL 284
               P+   A A P LK+L+EGVE+TE+ L    +K GV+KFDP  + FDP+   AM+++
Sbjct: 100 ----PAEARANAEPGLKALIEGVELTERSLLNALEKNGVKKFDPKGQKFDPNFQQAMYEV 155

Query: 285 PDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 319
           PD S P GTV  V+++G+T+ +RV+RPA VGV + 
Sbjct: 156 PDPSVPAGTVVQVVQAGFTIGDRVLRPALVGVAKG 190

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Rhodopseudomonas palustris (strain TIE-1) (taxid: 395960)

>sp|Q07US4|GRPE_RHOP5 Protein GrpE OS=Rhodopseudomonas palustris (strain BisA53) GN=grpE PE=3 SV=1

 Score =  137 bits (346), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 106/159 (66%), Gaps = 10/159 (6%)

Query: 159 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASS 218
           L+AK  E  + +DK+LR+ AEMEN++ RT RE  +++ + +  FA+ +L++ADNL RA  
Sbjct: 39  LLAK--EAAEARDKMLRTLAEMENLRKRTTREVADARIYGVTAFARDVLEIADNLQRALD 96

Query: 219 VVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRH 278
            V        P+   A A P LK+L++GVE+TE+ L    +K GV+KFDP  + FDP+  
Sbjct: 97  AV--------PAEARANAEPGLKALIDGVELTERSLINALEKNGVKKFDPSGQKFDPNFQ 148

Query: 279 NAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT 317
            AM+++PD S P GTV  V+++G+ L ERV+RPA VGV+
Sbjct: 149 QAMYEVPDASVPAGTVVQVVQAGFMLGERVLRPALVGVS 187

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Rhodopseudomonas palustris (strain BisA53) (taxid: 316055)

>sp|A4YJR1|GRPE_BRASO Protein GrpE OS=Bradyrhizobium sp. (strain ORS278) GN=grpE PE=3 SV=1

 Score =  137 bits (346), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 99/148 (66%), Gaps = 8/148 (5%)

Query: 170 QDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP 229
           +DK+LR+ AEMEN++ RT RE  +++ + I  FA+ +LD+ADNL RA   V        P
Sbjct: 48  RDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAV--------P 99

Query: 230 SNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSK 289
           +   A A   LKSL+EGVE+TE+ L    +K GV+KFDP  + FDP+   AM+++PD S 
Sbjct: 100 AETRANADAGLKSLIEGVELTERSLLNTLEKNGVKKFDPTGQKFDPNFQQAMYEVPDPSV 159

Query: 290 PPGTVAHVLKSGYTLYERVIRPAEVGVT 317
           P GTV  V+++G+ + ERV+RPA VGV+
Sbjct: 160 PSGTVVQVVQAGFMIGERVLRPALVGVS 187

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Bradyrhizobium sp. (strain ORS278) (taxid: 114615)

>sp|B6JCI1|GRPE_OLICO Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=grpE PE=3 SV=1

 Score =  137 bits (345), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/156 (45%), Positives = 105/156 (67%), Gaps = 8/156 (5%)

Query: 164 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 223
           +E  + +D++LR+ AEMEN++ RT RE  +++ + I  FA+ +L++ADNL RA       
Sbjct: 47  KEAAEAKDRMLRTLAEMENLRKRTQREVADARAYGIAGFARDVLEIADNLQRA------- 99

Query: 224 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQ 283
            L   P+   A A P L +L+EGVE+TE+ L    +K GV+K D   E FDP+ H AMF+
Sbjct: 100 -LDAVPAEARAAADPGLTALIEGVELTERSLHRALEKNGVKKLDAAGEKFDPNIHQAMFE 158

Query: 284 LPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 319
           +PDNS PPGTV  V+++GY + +RV+RPA VGV++A
Sbjct: 159 VPDNSVPPGTVVQVIQTGYMIGDRVLRPALVGVSKA 194

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) (taxid: 504832)

>sp|Q79V15|GRPE_BRAJA Protein GrpE OS=Bradyrhizobium japonicum (strain USDA 110) GN=grpE PE=3 SV=1

 Score =  134 bits (337), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 102/154 (66%), Gaps = 8/154 (5%)

Query: 163 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 222
            +E  + +D++LR+ AEMEN++ RT +E  +++ + I  FA+ +LD+ADNL RA      
Sbjct: 39  QKEAAEARDRMLRTLAEMENLRKRTTKEVADARLYGITGFARDVLDIADNLQRA------ 92

Query: 223 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 282
             L   P+   A A P L SL+EGVE+TE+ L    +K GV+KFDP  + FDP+   AMF
Sbjct: 93  --LDAVPAEARAAADPGLTSLIEGVELTERSLLNALEKHGVKKFDPQGQKFDPNFQQAMF 150

Query: 283 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV 316
           ++PD S P GTV  V+++GYT+ ERV+RPA VGV
Sbjct: 151 EVPDASVPAGTVVQVMQAGYTIGERVLRPALVGV 184

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Bradyrhizobium japonicum (strain USDA 110) (taxid: 224911)

>sp|P38523|GRPE_YEAST GrpE protein homolog, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MGE1 PE=1 SV=1

 Score =  133 bits (335), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 102/171 (59%), Gaps = 9/171 (5%)

Query: 152 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVAD 211
           +K+ E  L AK +E  +++D++LRS A+  N++  T ++ + +K FA+Q FAK LL+  D
Sbjct: 67  IKKLESQLSAKTKEASELKDRLLRSVADFRNLQQVTKKDIQKAKDFALQKFAKDLLESVD 126

Query: 212 NLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINE 271
           N G A +  KE  L+             +  L  GV MT        +K G+EK DP+ E
Sbjct: 127 NFGHALNAFKEEDLQKSKE---------ISDLYTGVRMTRDVFENTLRKHGIEKLDPLGE 177

Query: 272 PFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEN 322
           PFDP++H A F+LP   K PGTV HV + G+TL +RVIRPA+VG+ +  EN
Sbjct: 178 PFDPNKHEATFELPQPDKEPGTVFHVQQLGFTLNDRVIRPAKVGIVKGEEN 228

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of SSC1 to substrate proteins and the association of SSC1 with TIM44.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P48604|GRPE_DROME GrpE protein homolog, mitochondrial OS=Drosophila melanogaster GN=Roe1 PE=2 SV=2

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 112/190 (58%), Gaps = 20/190 (10%)

Query: 130 TKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIR 189
           T++  ++S  E+E       KL KE    L A  E+  ++ DK  RS A+ EN+++R  +
Sbjct: 44  TEQKATESSPEVE-------KLTKE----LAAAKEQNAELMDKYKRSLADSENMRNRLNK 92

Query: 190 EAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEM 249
           +  ++K F IQ+F K LL+VAD LG A+  V        P +  +G   L K+L EG+ M
Sbjct: 93  QISDAKIFGIQSFCKDLLEVADTLGHATQAV--------PKDKLSGNADL-KNLYEGLTM 143

Query: 250 TEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVI 309
           T   L +VFK+ G+E  DPIN+ FDP++H A+FQ  D +  P TV  V K GY L+ER I
Sbjct: 144 TRASLLQVFKRHGLEPLDPINQKFDPNQHEALFQKEDKTVEPNTVVEVTKLGYKLHERCI 203

Query: 310 RPAEVGVTQA 319
           RPA VGV++ 
Sbjct: 204 RPALVGVSKC 213

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Drosophila melanogaster (taxid: 7227)

>sp|Q13E58|GRPE_RHOPS Protein GrpE OS=Rhodopseudomonas palustris (strain BisB5) GN=grpE PE=3 SV=1

 Score =  132 bits (333), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 100/153 (65%), Gaps = 8/153 (5%)

Query: 165 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 224
           E  + +DK+LR+ AEMEN++ RT +E  +++ + +  FA+ +L++ADNL RA   V    
Sbjct: 43  EAAEARDKMLRTLAEMENLRRRTAKEVADARTYGVSAFARDVLEIADNLQRALDAV---- 98

Query: 225 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQL 284
               P+   A A   LK L+EGVE+TE+ L    +K GV+KFDP  E FDP+   AM+++
Sbjct: 99  ----PAEARANADAGLKGLIEGVELTERSLINALEKNGVKKFDPQGEKFDPNFQQAMYEV 154

Query: 285 PDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT 317
           PD S P GTV  V+++G+ + ERV+RPA VGV+
Sbjct: 155 PDPSVPAGTVVQVVQAGFMIGERVLRPALVGVS 187

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Rhodopseudomonas palustris (strain BisB5) (taxid: 316057)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	331
255580752	308	Protein grpE, putative [Ricinus communis	0.918	0.987	0.635	1e-105
359494074	298	PREDICTED: protein grpE-like [Vitis vini	0.879	0.976	0.608	1e-94
147811306	413	hypothetical protein VITISV_018795 [Viti	0.906	0.726	0.584	2e-92
224116576	244	predicted protein [Populus trichocarpa]	0.734	0.995	0.682	4e-91
224133294	265	predicted protein [Populus trichocarpa]	0.770	0.962	0.666	6e-90
359806326	290	uncharacterized protein LOC100812682 [Gl	0.864	0.986	0.565	3e-89
3851640	304	chaperone GrpE type 2 [Nicotiana tabacum	0.900	0.980	0.569	6e-89
18416821	327	molecular chaperone GrpE [Arabidopsis th	0.933	0.944	0.558	3e-85
297792997	302	hypothetical protein ARALYDRAFT_495605 [	0.900	0.986	0.537	1e-84
356527097	289	PREDICTED: protein grpE-like [Glycine ma	0.870	0.996	0.543	1e-84

>gi|255580752|ref|XP_002531197.1| Protein grpE, putative [Ricinus communis] gi|223529199|gb|EEF31174.1| Protein grpE, putative [Ricinus communis]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 211/332 (63%), Positives = 251/332 (75%), Gaps = 28/332 (8%)

Query: 1   MMASRV-LSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLT--QVSLFHQT 57
           M+ SRV LSRA+R VGRR+LLL+  S KQ  P  SNQ  SLV  + N+    QVSLFH +
Sbjct: 1   MLISRVVLSRASRSVGRRSLLLLSPSQKQQLPIFSNQIESLVHVNSNQFVAGQVSLFHHS 60

Query: 58  TLNSSIFQRFGF-SSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGD 116
             +SS FQRFGF SSASPE NEKE GS  +NN               D+   E    NGD
Sbjct: 61  AFSSSPFQRFGFTSSASPEANEKE-GSTAENNA--------------DSTNVEPETSNGD 105

Query: 117 AKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRS 176
            K S+E       T+E DSD+E +  LS DDLVKL+ E+EELL  K++E+++MQDKVLR+
Sbjct: 106 TKPSNE-------TREPDSDTEGD--LSMDDLVKLVAEKEELLKLKHKEIEKMQDKVLRT 156

Query: 177 FAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGA 236
           +AEMENV +RT REAENS+KFAIQNFAK LLDVADNLGRASSVVK+++ KID S DTAGA
Sbjct: 157 YAEMENVMERTKREAENSRKFAIQNFAKGLLDVADNLGRASSVVKDSYSKIDTSTDTAGA 216

Query: 237 VPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAH 296
           VPLLK+LLEGVEMTEKQL EVF+K GVEK+DP +EPFDPHRHNA+F++PD+SKPPGTVA 
Sbjct: 217 VPLLKTLLEGVEMTEKQLAEVFRKSGVEKYDPRDEPFDPHRHNAVFEVPDSSKPPGTVAV 276

Query: 297 VLKSGYTLYERVIRPAEVGVTQAVENDRAENN 328
           VLK+GY L++RVIRPAEVGVT+ VEND A NN
Sbjct: 277 VLKAGYLLHDRVIRPAEVGVTKEVENDTASNN 308

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494074|ref|XP_002277588.2| PREDICTED: protein grpE-like [Vitis vinifera] gi|297737494|emb|CBI26695.3| unnamed protein product [Vitis vinifera]

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 202/332 (60%), Positives = 241/332 (72%), Gaps = 41/332 (12%)

Query: 1   MMASRVLSRATRCV---GRRALLLVPTSGKQHSPALSNQFHSLVFESPNKL--TQVSLFH 55
           M ASRVL R+TR +   GR + LL P S         N F  L+ ES +K+  TQVSL H
Sbjct: 1   MFASRVLFRSTRTLLAQGRTSSLLAPQSHL-------NTF--LIGESTDKVVATQVSLLH 51

Query: 56  QTTLNSSIFQRFGFSS-ASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPN 114
               N+SIFQRFG SS ASP+ NEKE   + +  G            +V+N+GA A    
Sbjct: 52  HLVHNASIFQRFGISSSASPQTNEKETTQSGNEQG------------TVENDGAPA---- 95

Query: 115 GDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVL 174
            DA+ +      T++ +ESDS    E +LS DDL+KL+ E+EELL  KN+E+++MQDKVL
Sbjct: 96  -DAEPAK-----TNQAEESDS----EADLSMDDLMKLVLEKEELLKMKNKEIEKMQDKVL 145

Query: 175 RSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTA 234
           RS+AEMENV +R  REAENSKKFAIQNFAK+LLDVADNLGRAS VVKE+F KID S DTA
Sbjct: 146 RSYAEMENVMERARREAENSKKFAIQNFAKSLLDVADNLGRASLVVKESFSKIDESKDTA 205

Query: 235 GAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTV 294
           GAVPLLK+LLEGVEMTEKQLGEVF+KFG+EKFDP NE FDPHRHNA FQ+PD SKP GTV
Sbjct: 206 GAVPLLKTLLEGVEMTEKQLGEVFRKFGMEKFDPTNEQFDPHRHNAAFQIPDPSKPSGTV 265

Query: 295 AHVLKSGYTLYERVIRPAEVGVTQAVENDRAE 326
           A VLK+GY L++RVIRPAEVGVTQAV+N+  E
Sbjct: 266 AVVLKAGYMLHDRVIRPAEVGVTQAVDNNETE 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147811306|emb|CAN76715.1| hypothetical protein VITISV_018795 [Vitis vinifera]

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/339 (58%), Positives = 241/339 (71%), Gaps = 39/339 (11%)

Query: 6   VLSRATRCV---GRRALLLVPTSGKQHSPALSNQFHSLVFESPNKL--TQVSLFHQTTLN 60
           VL R+TR +   GR + LL P S         N F  L+ ES +K+  TQVSL H    N
Sbjct: 95  VLFRSTRTLLAQGRTSSLLAPQSHL-------NTF--LIGESTDKVVATQVSLLHHLVHN 145

Query: 61  SSIFQRFGFSS-ASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEA-PKPNGDAK 118
           +SIFQRFG SS ASP+ NEKE   + +  G            +V+N+GA A  +P    +
Sbjct: 146 ASIFQRFGISSSASPQTNEKETTQSGNEQG------------TVENDGAPADAEPAKTNQ 193

Query: 119 ASDEGMEATDRTKE-----------SDSDSESEIELSRDDLVKLLKEREELLMAKNEEMK 167
           A + G  +  +++            + SDS+SE +LS DDL+KL+ E+EELL  KN+E++
Sbjct: 194 AEESGYNSKPQSESVKRRRRGTKRTAFSDSDSEADLSMDDLMKLVVEKEELLKMKNKEIE 253

Query: 168 QMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKI 227
           +MQDKVLRS+AEMENV +R  REAENSKKFAIQNFAK+LLDVADNLGRAS VVKE+F KI
Sbjct: 254 KMQDKVLRSYAEMENVMERARREAENSKKFAIQNFAKSLLDVADNLGRASLVVKESFSKI 313

Query: 228 DPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDN 287
           D S DTAGAVPLLK+LLEGVEMTEKQLGEVF+KFG+EKFDP NE FDPHRHNA FQ+PD 
Sbjct: 314 DESKDTAGAVPLLKTLLEGVEMTEKQLGEVFRKFGMEKFDPTNEQFDPHRHNAAFQIPDP 373

Query: 288 SKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAE 326
           SKP GTVA VLK+GY L++RVIRPAEVGVTQAV+N+  E
Sbjct: 374 SKPSGTVAVVLKAGYMLHDRVIRPAEVGVTQAVDNNETE 412

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116576|ref|XP_002317335.1| predicted protein [Populus trichocarpa] gi|222860400|gb|EEE97947.1| predicted protein [Populus trichocarpa]

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 183/268 (68%), Positives = 209/268 (77%), Gaps = 25/268 (9%)

Query: 57  TTLNSSIFQRFGF-SSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNG 115
           + LNSS+FQ FGF SSASPEP EKE GSA +N+GA +     D K S + NG+       
Sbjct: 1   SALNSSLFQNFGFTSSASPEPGEKEHGSAVENDGAPT-----DVK-SEETNGS------- 47

Query: 116 DAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLR 175
                        RT  SDSD+E+  +LS DDLVKL+ E+EELL  K++EM+ MQDKVLR
Sbjct: 48  -----------IKRTAFSDSDAEAVSDLSMDDLVKLVMEKEELLKEKHKEMETMQDKVLR 96

Query: 176 SFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAG 235
           ++AEMENVK+RT REAENSKKFAIQNFAK+LLDVADNLGRASSVVK NF KI+ SND A 
Sbjct: 97  TYAEMENVKERTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGNFSKINVSNDAAD 156

Query: 236 AVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVA 295
            VPLLK+LLEGVEMTEKQLGEVFKK+GVEKFDPINEPFDPHRHNAMF++PD  KPPG VA
Sbjct: 157 VVPLLKTLLEGVEMTEKQLGEVFKKYGVEKFDPINEPFDPHRHNAMFEVPDPLKPPGIVA 216

Query: 296 HVLKSGYTLYERVIRPAEVGVTQAVEND 323
            VLK GY L+ERVIRPAEVGVT+AVE D
Sbjct: 217 AVLKVGYMLHERVIRPAEVGVTRAVEKD 244

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133294|ref|XP_002321532.1| predicted protein [Populus trichocarpa] gi|222868528|gb|EEF05659.1| predicted protein [Populus trichocarpa]

 Score =  337 bits (863), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 180/270 (66%), Positives = 209/270 (77%), Gaps = 15/270 (5%)

Query: 57  TTLNSSIFQRFGF-SSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEA---PK 112
           + LNS  FQ FGF SSASPEP EKEQG+  D             +DSV +   E+    +
Sbjct: 1   SALNSPPFQNFGFTSSASPEPTEKEQGNLSDK-----------TEDSVLHETKESGFNSE 49

Query: 113 PNGDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDK 172
                  S +    T RT  SDSDSE+  +LS DDLVKL+ E+EELL AK++E++ +QDK
Sbjct: 50  SQQTISRSGKRRRVTKRTAYSDSDSEAGSDLSMDDLVKLVAEKEELLEAKHKEIETIQDK 109

Query: 173 VLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSND 232
           VLR++AEMENVK+RT REAENSKKFAIQNFAK+LLDVADNLGRASSVVK NF KID SND
Sbjct: 110 VLRAYAEMENVKERTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGNFSKIDVSND 169

Query: 233 TAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPG 292
           TA  VPLLK+LLEGVEMTEKQLGEVFKK+G+EKFDP NEPFDPHRHNA+FQ+PD SKPPG
Sbjct: 170 TAQVVPLLKTLLEGVEMTEKQLGEVFKKYGIEKFDPTNEPFDPHRHNAIFQVPDASKPPG 229

Query: 293 TVAHVLKSGYTLYERVIRPAEVGVTQAVEN 322
           TVA VLK+GY L++RVIRPAEVGVT+ VEN
Sbjct: 230 TVAAVLKAGYMLHDRVIRPAEVGVTREVEN 259

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806326|ref|NP_001240970.1| uncharacterized protein LOC100812682 [Glycine max] gi|255638729|gb|ACU19669.1| unknown [Glycine max]

 Score =  334 bits (857), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 185/327 (56%), Positives = 224/327 (68%), Gaps = 41/327 (12%)

Query: 1   MMASRVLSRATRCVGRR-ALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTT- 58
           M A RVLSR++  + R   L  V  + +  S  LSN FHSL+  SPNKL  V    QT  
Sbjct: 1   MFAYRVLSRSSAILSRSFTLFSVSRNSQPFSTTLSNNFHSLLHPSPNKLIPV----QTNF 56

Query: 59  LNSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAK 118
           LNSS+  RFGFSS +   +  E+    D +                              
Sbjct: 57  LNSSLTSRFGFSSTASHEHASEEAKVSDQS------------------------------ 86

Query: 119 ASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFA 178
              E  EA D+TKE  SD ESE +LSRDDL+KL+ E+E+LL  K++E+++MQDKVLR++A
Sbjct: 87  ---EQAEAADQTKE--SDVESECDLSRDDLIKLVAEKEQLLKLKHKEIEKMQDKVLRTYA 141

Query: 179 EMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVP 238
           EMENV DRT REAENSKKFAIQNFAK+LLDVADNLGRASSVVK+NF KI+   +++ A  
Sbjct: 142 EMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDNFSKIESPEESSEAAQ 201

Query: 239 LLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVL 298
           LLK+LLEGVEMTEKQL EV KKFGVEKFDP NEPFDPH HNA+FQ+PD SK PGTV  VL
Sbjct: 202 LLKTLLEGVEMTEKQLAEVLKKFGVEKFDPTNEPFDPHMHNAIFQIPDASKAPGTVGVVL 261

Query: 299 KSGYTLYERVIRPAEVGVTQAVENDRA 325
           K+GY LY+RV+RPAEVGVTQ VE+++A
Sbjct: 262 KAGYKLYDRVLRPAEVGVTQEVEDNKA 288

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3851640|gb|AAC72387.1| chaperone GrpE type 2 [Nicotiana tabacum]

 Score =  333 bits (854), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 192/337 (56%), Positives = 234/337 (69%), Gaps = 39/337 (11%)

Query: 1   MMASRVLSRATRCV---GRRALLLVP--TSGKQHSPALSNQFHSLVFESPNKLTQVSLFH 55
           M  SR+ SR  R +    R ++LL       +QH P L+ QFHSL     +   +VSLFH
Sbjct: 1   MSVSRISSRFRRAILNQCRSSVLLYSREQQRQQHVPVLAFQFHSL----RDFKEKVSLFH 56

Query: 56  QTTLNSSIFQRFGFSS-ASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPN 114
           ++ L     QRFG SS ASP+PNEKE   +    G  S K N D + SV          +
Sbjct: 57  ESAL-----QRFGISSSASPQPNEKESSQSQSEPG--STKENGDCEASV----------S 99

Query: 115 GDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVL 174
            D+   DE         + +SD+E   +LSRDDLVKL+ E+EELL  K+ E ++MQDKVL
Sbjct: 100 ADSHVQDE---------KDESDTE---DLSRDDLVKLVAEKEELLKMKDGEFQKMQDKVL 147

Query: 175 RSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTA 234
           R++AEMENV +RT REAENSKKFAIQNF KALLDV+DNLGRASSVVKE+F KID S DTA
Sbjct: 148 RTYAEMENVMNRTKREAENSKKFAIQNFVKALLDVSDNLGRASSVVKESFSKIDESKDTA 207

Query: 235 GAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTV 294
           GAVPLLK+LLEGVEMT+KQL EVFKKFGV K+DP NE FDP++HNA+FQ+PD  K PG V
Sbjct: 208 GAVPLLKTLLEGVEMTDKQLAEVFKKFGVGKYDPTNEQFDPNKHNAIFQVPDPKKAPGVV 267

Query: 295 AHVLKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA 331
           A  LKSGYTL+ER+IRPAEVGVT AVE+ +A+ N +A
Sbjct: 268 AVCLKSGYTLHERIIRPAEVGVTVAVESTQADQNTEA 304

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18416821|ref|NP_567757.1| molecular chaperone GrpE [Arabidopsis thaliana] gi|21593024|gb|AAM64973.1| grpE like protein [Arabidopsis thaliana] gi|26451456|dbj|BAC42827.1| putative grpE protein [Arabidopsis thaliana] gi|29824143|gb|AAP04032.1| putative grpE protein [Arabidopsis thaliana] gi|332659851|gb|AEE85251.1| molecular chaperone GrpE [Arabidopsis thaliana]

 Score =  321 bits (823), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 185/331 (55%), Positives = 232/331 (70%), Gaps = 22/331 (6%)

Query: 1   MMASRVLSRATRCVG-RRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTL 59
           M+  R+LSR TR  G R +L  V    +  +P  S++FHSL  +  +KL    +   + +
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQM---SMM 57

Query: 60  NSSIFQRFGFSSA-SPEPNEKEQGSAPDNNGAESP-----KPNRDA--KDSVDNNGAEAP 111
           +S   QRF FSS+ SPE +EK+  +       E P     +P  D+  KDSV ++     
Sbjct: 58  DSFALQRFNFSSSTSPESDEKKTHTEASKTSEEKPTAEANQPGLDSESKDSVTDS----- 112

Query: 112 KPNGDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQD 171
                AK   +G +    +         + ELS DDLVKL+ E+EELL  K EE+KQ++D
Sbjct: 113 -----AKRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKD 167

Query: 172 KVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN 231
           KVLR++AEMENV DRT R+AEN+KK+A+QNFAK+LLDVADNLGRASSVVKE+F K+D S 
Sbjct: 168 KVLRTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSE 227

Query: 232 DTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPP 291
           D+AGA PLLK+LLEGVEMTEKQL EVFKKFG+EK+DPINEPFDP+RHNA+FQ+PD SKP 
Sbjct: 228 DSAGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPE 287

Query: 292 GTVAHVLKSGYTLYERVIRPAEVGVTQAVEN 322
           GTVAHVLKSGYTLY+RVIRPAEVGVTQ  EN
Sbjct: 288 GTVAHVLKSGYTLYDRVIRPAEVGVTQGGEN 318

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792997|ref|XP_002864383.1| hypothetical protein ARALYDRAFT_495605 [Arabidopsis lyrata subsp. lyrata] gi|297310218|gb|EFH40642.1| hypothetical protein ARALYDRAFT_495605 [Arabidopsis lyrata subsp. lyrata]

 Score =  319 bits (818), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 180/335 (53%), Positives = 227/335 (67%), Gaps = 37/335 (11%)

Query: 1   MMASRVLSRATRCVG-RRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQV--SLFHQT 57
           M+ SRVLSR +R  G R +L  V T  +   P +S++FHSLV  +PNKL  V  SL +  
Sbjct: 1   MLVSRVLSRVSRSAGLRSSLSSVVTPKRNQIPIVSSRFHSLVHGNPNKLVAVPVSLLNHG 60

Query: 58  TLNSSIFQRFGF-SSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGD 116
           TL+ ++ QRFGF SS+S EP   E  +                         E PK    
Sbjct: 61  TLDLNVLQRFGFFSSSSAEPKGNESYT-------------------------EVPKT--- 92

Query: 117 AKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRS 176
            +AS++     D   E D D     ++SRDDLVKL+ E+E+LL  + E++K+M+DK LR+
Sbjct: 93  GEASEDVEVGRDTDAEIDFD-----DMSRDDLVKLVGEKEDLLKVQQEDIKEMKDKFLRT 147

Query: 177 FAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGA 236
           +AE +N+ DRT R AEN+KKFA+QNFA +LLDVADNL RASSVVKE+F KID S D+AGA
Sbjct: 148 YAEQQNLMDRTKRNAENAKKFAVQNFATSLLDVADNLERASSVVKESFSKIDTSKDSAGA 207

Query: 237 VPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAH 296
            PLLK+LLEGVEMTEKQL EVFKK G+ K DP+NEPFDP++HNA+FQ+PD SKP GT+AH
Sbjct: 208 APLLKNLLEGVEMTEKQLAEVFKKSGLVKEDPLNEPFDPNKHNAVFQVPDASKPKGTIAH 267

Query: 297 VLKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA 331
           VLK GY+LY+RVIRPAEVGVT AVEN+  E    A
Sbjct: 268 VLKPGYSLYDRVIRPAEVGVTCAVENEEGEKESAA 302

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527097|ref|XP_003532150.1| PREDICTED: protein grpE-like [Glycine max]

 Score =  319 bits (818), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 176/324 (54%), Positives = 218/324 (67%), Gaps = 36/324 (11%)

Query: 1   MMASRVLSRATRCVGRR-ALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTL 59
           M A RVLSR++  + R   L  V  + +  S  LSN F+SL+  SPNKL  V      ++
Sbjct: 1   MFAYRVLSRSSATLSRSFTLFSVSRNSQPFSTNLSNNFNSLLHPSPNKLIPVQTNFLNSM 60

Query: 60  NSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKA 119
           N S+  RFGFSS +   +  E     D +                               
Sbjct: 61  NPSLTSRFGFSSTASHEHASEGAKVSDQS------------------------------- 89

Query: 120 SDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAE 179
             E  EA D+TKESD   E E +LSRDDL+KL+ E+E+LL  K++E+++MQDKVLR++AE
Sbjct: 90  --EQAEAADQTKESDV--EIECDLSRDDLIKLVAEKEQLLKLKHKEIEKMQDKVLRTYAE 145

Query: 180 MENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPL 239
           MENV DRT REAENSKKFAIQNFAK+LLDVADNLGRASSVVKE+F KI+   +++ A  L
Sbjct: 146 MENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIESPEESSEAAEL 205

Query: 240 LKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLK 299
           LK+LL+GVEMTEKQL EV KKFGV+KFDP NEPFDPH HNA+FQ+PD SK PGTV  VLK
Sbjct: 206 LKTLLKGVEMTEKQLAEVLKKFGVKKFDPTNEPFDPHMHNAIFQIPDASKAPGTVGVVLK 265

Query: 300 SGYTLYERVIRPAEVGVTQAVEND 323
           +GY LY+RV+RPAEVGVTQ VE++
Sbjct: 266 AGYMLYDRVLRPAEVGVTQEVEDN 289

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	331
TAIR|locus:2116277	327	AR192 [Arabidopsis thaliana (t	0.978	0.990	0.502	1.6e-77
TAIR|locus:2161615	302	MGE1 "mitochondrial GrpE 1" [A	0.507	0.556	0.684	4.7e-72
GENEDB_PFALCIPARUM|PF11_0258	301	PF11_0258 "co-chaperone GrpE,	0.432	0.475	0.421	1.1e-31
UNIPROTKB|Q8IIB6	301	PF11_0258 "Co-chaperone GrpE,	0.432	0.475	0.421	1.1e-31
SGD|S000005758	228	MGE1 "Mitochondrial matrix coc	0.453	0.657	0.415	5.6e-29
CGD|CAL0002414	242	MGE1 [Candida albicans (taxid:	0.456	0.623	0.428	1.5e-28
FB|FBgn0014877	213	Roe1 "Roe1" [Drosophila melano	0.441	0.685	0.438	3.1e-28
UNIPROTKB|Q5ZHV6	222	GRPEL1 "GrpE protein homolog"	0.441	0.657	0.448	1.7e-27
RGD|70947	217	Grpel1 "GrpE-like 1, mitochond	0.441	0.672	0.448	7.3e-27
MGI|MGI:1334417	217	Grpel1 "GrpE-like 1, mitochond	0.441	0.672	0.442	1.5e-26

TAIR|locus:2116277 AR192 [Arabidopsis thaliana (taxid:3702)]

 Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
 Identities = 168/334 (50%), Positives = 215/334 (64%)

Query:     1 MMASRVLSRATRCVG-RRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTL 59
             M+  R+LSR TR  G R +L  V    +  +P  S++FHSL  +  +KL    +   + +
Sbjct:     1 MLVLRILSRVTRNAGIRSSLSAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQM---SMM 57

Query:    60 NSSIFQRFGFSSA-SPEPNEKEQGSAPDNNGAESPKPNRDAKD-SVDNNGAEAPKPNGDA 117
             +S   QRF FSS+ SPE +EK+  +       E  KP  +A    +D+   ++   +  A
Sbjct:    58 DSFALQRFNFSSSTSPESDEKKTHTEASKTSEE--KPTAEANQPGLDSESKDSVTDS--A 113

Query:   118 KASDEGMEATDRTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEMKQMQDKVLRSF 177
             K   +G +    +                                 EE+KQ++DKVLR++
Sbjct:   114 KRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRTY 173

Query:   178 AEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV 237
             AEMENV DRT R+AEN+KK+A+QNFAK+LLDVADNLGRASSVVKE+F K+D S D+AGA 
Sbjct:   174 AEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGAA 233

Query:   238 PLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHV 297
             PLLK+LLEGVEMTEKQL EVFKKFG+EK+DPINEPFDP+RHNA+FQ+PD SKP GTVAHV
Sbjct:   234 PLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAHV 293

Query:   298 LKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA 331
             LKSGYTLY+RVIRPAEVGVTQ  EN   +    A
Sbjct:   294 LKSGYTLYDRVIRPAEVGVTQGGENQEEKKESDA 327

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009408 "response to heat" evidence=IEP

GO:0010286 "heat acclimation" evidence=IGI

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

TAIR|locus:2161615 MGE1 "mitochondrial GrpE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 592 (213.5 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
 Identities = 115/168 (68%), Positives = 140/168 (83%)

Query:   164 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 223
             +++ +M+DK LR++AE +N+ DRT R AE++KKFA+QNFA +LLDVADNL RASSVVKE+
Sbjct:   135 KDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVADNLERASSVVKES 194

Query:   224 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQ 283
             F KID S D AGA PLLK+LLEGVEMTEKQL EVF+K G+ K DP+NEPF+P+RHNA+FQ
Sbjct:   195 FSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDPLNEPFNPNRHNAVFQ 254

Query:   284 LPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA 331
             +PD SKP GT+AHVLKSGY+LY+RVIRPAEVGVT AVEN        A
Sbjct:   255 VPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAVENQEGGKESAA 302

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0009411 "response to UV" evidence=IEP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GENEDB_PFALCIPARUM|PF11_0258 PF11_0258 "co-chaperone GrpE, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 317 (116.6 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
 Identities = 64/152 (42%), Positives = 102/152 (67%)

Query:   167 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLK 226
             K +++K L   AE EN+++R ++E E SK + I NFAK+LLDVADNL  A   + E  LK
Sbjct:   158 KVLKEKYLSVLAENENLRNRYMKEIETSKLYCISNFAKSLLDVADNLSLAIKNINEESLK 217

Query:   227 IDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPD 286
                +N+       + ++ +G+EMTE  L  +F K+G++K++PINE F+P  H A+F++ D
Sbjct:   218 ---TNEE------INNIYKGIEMTETILHNIFNKYGIDKYNPINEKFNPQLHEAIFEIND 268

Query:   287 NSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
             ++K  GTVA V++ GY + +R++R A+VGV +
Sbjct:   269 STKEKGTVATVIQHGYKIKDRILRAAKVGVVK 300

GO:0051082 "unfolded protein binding" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0030150 "protein import into mitochondrial matrix" evidence=TAS

UNIPROTKB|Q8IIB6 PF11_0258 "Co-chaperone GrpE, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 317 (116.6 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
 Identities = 64/152 (42%), Positives = 102/152 (67%)

Query:   167 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLK 226
             K +++K L   AE EN+++R ++E E SK + I NFAK+LLDVADNL  A   + E  LK
Sbjct:   158 KVLKEKYLSVLAENENLRNRYMKEIETSKLYCISNFAKSLLDVADNLSLAIKNINEESLK 217

Query:   227 IDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPD 286
                +N+       + ++ +G+EMTE  L  +F K+G++K++PINE F+P  H A+F++ D
Sbjct:   218 ---TNEE------INNIYKGIEMTETILHNIFNKYGIDKYNPINEKFNPQLHEAIFEIND 268

Query:   287 NSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
             ++K  GTVA V++ GY + +R++R A+VGV +
Sbjct:   269 STKEKGTVATVIQHGYKIKDRILRAAKVGVVK 300

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0030150 "protein import into mitochondrial matrix" evidence=TAS

GO:0051082 "unfolded protein binding" evidence=ISS

SGD|S000005758 MGE1 "Mitochondrial matrix cochaperone" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 66/159 (41%), Positives = 97/159 (61%)

Query:   164 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 223
             +E  +++D++LRS A+  N++  T ++ + +K FA+Q FAK LL+  DN G A +  KE 
Sbjct:    79 KEASELKDRLLRSVADFRNLQQVTKKDIQKAKDFALQKFAKDLLESVDNFGHALNAFKEE 138

Query:   224 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQ 283
              L+   S +       +  L  GV MT        +K G+EK DP+ EPFDP++H A F+
Sbjct:   139 DLQ--KSKE-------ISDLYTGVRMTRDVFENTLRKHGIEKLDPLGEPFDPNKHEATFE 189

Query:   284 LPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEN 322
             LP   K PGTV HV + G+TL +RVIRPA+VG+ +  EN
Sbjct:   190 LPQPDKEPGTVFHVQQLGFTLNDRVIRPAKVGIVKGEEN 228

GO:0042026 "protein refolding" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0030150 "protein import into mitochondrial matrix" evidence=IMP

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA;IDA;IMP

GO:0001405 "presequence translocase-associated import motor" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=IEA;IDA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

CGD|CAL0002414 MGE1 [Candida albicans (taxid:5476)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 69/161 (42%), Positives = 103/161 (63%)

Query:   163 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 222
             ++E+  M++   R+ A+  ++++ T  E + +K FA+Q FAK LLD  DN   A   VKE
Sbjct:    91 DKELASMKNHYARAIADFRHLQETTKTEVQKAKDFALQKFAKDLLDSLDNFNLALGHVKE 150

Query:   223 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 282
             + LK+   ND       ++SL EGV+MT+    +   K+G+EK DPI++ FDP+ H A F
Sbjct:   151 DTLKL---NDE------VRSLYEGVDMTKTVFEKTLNKYGIEKIDPIDQVFDPNLHEATF 201

Query:   283 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEND 323
             Q+ +  K PGTV HV + GYTL ERV+RPA+VGV ++ E+D
Sbjct:   202 QMANPGKEPGTVFHVQQVGYTLNERVLRPAKVGVVKS-EDD 241

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0001405 "presequence translocase-associated import motor" evidence=IEA

GO:0042026 "protein refolding" evidence=IEA

GO:0030150 "protein import into mitochondrial matrix" evidence=IEA

FB|FBgn0014877 Roe1 "Roe1" [Drosophila melanogaster (taxid:7227)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 68/155 (43%), Positives = 99/155 (63%)

Query:   164 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 223
             E+  ++ DK  RS A+ EN+++R  ++  ++K F IQ+F K LL+VAD LG A+  V ++
Sbjct:    67 EQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADTLGHATQAVPKD 126

Query:   224 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQ 283
               K+  + D       LK+L EG+ MT   L +VFK+ G+E  DPIN+ FDP++H A+FQ
Sbjct:   127 --KLSGNAD-------LKNLYEGLTMTRASLLQVFKRHGLEPLDPINQKFDPNQHEALFQ 177

Query:   284 LPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
               D +  P TV  V K GY L+ER IRPA VGV++
Sbjct:   178 KEDKTVEPNTVVEVTKLGYKLHERCIRPALVGVSK 212

GO:0051082 "unfolded protein binding" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS;NAS

GO:0006457 "protein folding" evidence=ISS;NAS

GO:0005759 "mitochondrial matrix" evidence=ISS;NAS

GO:0006626 "protein targeting to mitochondrion" evidence=ISS;NAS

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|Q5ZHV6 GRPEL1 "GrpE protein homolog" [Gallus gallus (taxid:9031)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 70/156 (44%), Positives = 99/156 (63%)

Query:   164 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRAS-SVVKE 222
             E++K++ DK  R+ A+ ENV+ R+ +  E +K + IQ+F K LL+VAD L +A+ SV KE
Sbjct:    74 EQLKEVTDKYKRALADAENVRQRSQKLVEEAKLYGIQSFCKDLLEVADILEKATESVPKE 133

Query:   223 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 282
                +I   N      P LKSL EG+ MTE Q+ +VFKK G+ + +P+   FDP+ H A+F
Sbjct:   134 ---EIKDEN------PHLKSLYEGLVMTEVQIQKVFKKHGLLRLNPVGAKFDPYEHEALF 184

Query:   283 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
               P   K PGT+A V K GY L+ R +RPA VGV +
Sbjct:   185 HAPMEGKEPGTIALVSKIGYKLHGRTLRPALVGVVK 220

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

RGD|70947 Grpel1 "GrpE-like 1, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 70/156 (44%), Positives = 97/156 (62%)

Query:   164 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRAS-SVVKE 222
             E++K+  +K  R+ A+ EN++ R+ +  E +K + IQ F K LL+VAD L +A+ SV KE
Sbjct:    69 EQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQSVPKE 128

Query:   223 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 282
                  + SN+     P LKSL EG+ MTE Q+ +VF K G+ + DPI   FDP+ H A+F
Sbjct:   129 -----EVSNNN----PHLKSLYEGLVMTEVQIQKVFTKHGLLRLDPIGAKFDPYEHEALF 179

Query:   283 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
               P   K PGTVA V K GY L+ R +RPA VGV +
Sbjct:   180 HTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVK 215

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005759 "mitochondrial matrix" evidence=IEA;ISO

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA;ISO

GO:0051087 "chaperone binding" evidence=IEA

MGI|MGI:1334417 Grpel1 "GrpE-like 1, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 69/156 (44%), Positives = 96/156 (61%)

Query:   164 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRAS-SVVKE 222
             E++++  +K  R+ A+ EN++ R+ +  E +K + IQ F K LL+VAD L +A+ SV KE
Sbjct:    69 EQLRETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQSVPKE 128

Query:   223 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 282
                    SN+     P LKSL EG+ MTE Q+ +VF K G+ + DPI   FDP+ H A+F
Sbjct:   129 EI-----SNNN----PHLKSLYEGLVMTEVQIQKVFTKHGLLRLDPIGAKFDPYEHEALF 179

Query:   283 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
               P   K PGTVA V K GY L+ R +RPA VGV +
Sbjct:   180 HTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVK 215

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=ISO

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=ISO

GO:0051087 "chaperone binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00027261001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (298 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00016660001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (207 aa)				•		•	•		0.760
	GSVIVG00005738001	SubName- Full=Chromosome chr3 scaffold_157, whole genome shotgun sequence; (626 aa)	•		•		•	•	•		0.710
	GSVIVG00022013001	SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence; (667 aa)	•		•		•		•		0.658
	GSVIVG00017724001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (538 aa)	•		•		•		•		0.618
	GSVIVG00013558001	SubName- Full=Chromosome undetermined scaffold_502, whole genome shotgun sequence; Flags- Fragm [...] (322 aa)	•		•		•		•		0.587
	GSVIVG00004392001	SubName- Full=Chromosome undetermined scaffold_686, whole genome shotgun sequence; (425 aa)	•		•		•		•		0.577
	GSVIVG00037232001	SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (658 aa)	•		•		•		•		0.573
	GSVIVG00006687001	SubName- Full=Chromosome chr2 scaffold_176, whole genome shotgun sequence; (667 aa)	•		•		•		•		0.572
	GSVIVG00022731001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (655 aa)	•		•		•		•		0.564
	GSVIVG00034177001	SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (531 aa)				•		•	•		0.556

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	331
cd00446	137	cd00446, GrpE, GrpE is the adenine nucleotide exch	3e-56
pfam01025	165	pfam01025, GrpE, GrpE	1e-54
COG0576	193	COG0576, GrpE, Molecular chaperone GrpE (heat shoc	1e-46
PRK14141	209	PRK14141, PRK14141, heat shock protein GrpE; Provi	3e-44
PRK14150	193	PRK14150, PRK14150, heat shock protein GrpE; Provi	5e-35
PRK14140	191	PRK14140, PRK14140, heat shock protein GrpE; Provi	1e-34
PRK14155	208	PRK14155, PRK14155, heat shock protein GrpE; Provi	1e-31
PRK14139	185	PRK14139, PRK14139, heat shock protein GrpE; Provi	5e-30
PRK14151	176	PRK14151, PRK14151, heat shock protein GrpE; Provi	3e-26
PRK14153	194	PRK14153, PRK14153, heat shock protein GrpE; Provi	8e-24
PRK10325	197	PRK10325, PRK10325, heat shock protein GrpE; Provi	2e-22
PRK14161	178	PRK14161, PRK14161, heat shock protein GrpE; Provi	1e-21
PRK14149	191	PRK14149, PRK14149, heat shock protein GrpE; Provi	2e-21
PRK14144	199	PRK14144, PRK14144, heat shock protein GrpE; Provi	4e-21
PRK14158	194	PRK14158, PRK14158, heat shock protein GrpE; Provi	6e-21
PRK14148	195	PRK14148, PRK14148, heat shock protein GrpE; Provi	1e-20
PRK14160	211	PRK14160, PRK14160, heat shock protein GrpE; Provi	2e-20
PRK14162	194	PRK14162, PRK14162, heat shock protein GrpE; Provi	9e-20
PRK14147	172	PRK14147, PRK14147, heat shock protein GrpE; Provi	3e-19
PRK14143	238	PRK14143, PRK14143, heat shock protein GrpE; Provi	8e-19
PRK14156	177	PRK14156, PRK14156, heat shock protein GrpE; Provi	1e-17
PRK14154	208	PRK14154, PRK14154, heat shock protein GrpE; Provi	8e-15
PRK14159	176	PRK14159, PRK14159, heat shock protein GrpE; Provi	3e-14
PRK14146	215	PRK14146, PRK14146, heat shock protein GrpE; Provi	5e-14
PRK14157	227	PRK14157, PRK14157, heat shock protein GrpE; Provi	2e-13
PRK14145	196	PRK14145, PRK14145, heat shock protein GrpE; Provi	3e-13
PRK14163	214	PRK14163, PRK14163, heat shock protein GrpE; Provi	2e-08
PRK14164	218	PRK14164, PRK14164, heat shock protein GrpE; Provi	3e-07
PRK14142	223	PRK14142, PRK14142, heat shock protein GrpE; Provi	2e-04

>gnl|CDD|238252 cd00446, GrpE, GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases

 Score =  178 bits (455), Expect = 3e-56
 Identities = 72/150 (48%), Positives = 95/150 (63%), Gaps = 14/150 (9%)

Query: 167 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLK 226
           ++++DK+LR+ AE EN + RT RE E ++K+AI+ FAK LL V DNL RA    K+    
Sbjct: 2   EELKDKLLRALAEFENYRKRTEREREEARKYAIEKFAKDLLPVLDNLERALEAAKKE--- 58

Query: 227 IDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPD 286
                        LK+L+EGVEMT KQL +V +K GVEK +P  EPFDP+ H A+ Q+P 
Sbjct: 59  -----------EELKNLVEGVEMTLKQLLDVLEKHGVEKIEPEGEPFDPNLHEAVMQVPS 107

Query: 287 NSKPPGTVAHVLKSGYTLYERVIRPAEVGV 316
               PGTV  VL+ GY L +RV+RPA V V
Sbjct: 108 PDVEPGTVVEVLQKGYKLGDRVLRPAMVVV 137

The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent. Length = 137

>gnl|CDD|216249 pfam01025, GrpE, GrpE

 Score =  175 bits (447), Expect = 1e-54
 Identities = 82/177 (46%), Positives = 111/177 (62%), Gaps = 14/177 (7%)

Query: 140 EIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAI 199
           E +   ++L    +  EE L    EE+++++D++LR  AE EN + RT RE E +KK+AI
Sbjct: 1   EEKEEEEELEDEEEALEEELEELEEEIEELKDRLLRLLAEFENYRKRTEREREEAKKYAI 60

Query: 200 QNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFK 259
           + FAK LL V DNL RA +  KEN                +KSL+EGVEM  KQL +V +
Sbjct: 61  EKFAKDLLPVLDNLERALAAAKEN--------------EDVKSLVEGVEMILKQLLKVLE 106

Query: 260 KFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV 316
           K GVEK +P  EPFDP+ H A+ Q+P + KPPGTV  VL+ GY L++RV+RPA V V
Sbjct: 107 KHGVEKIEPEGEPFDPNLHEAVSQVPSDEKPPGTVVEVLQKGYKLHDRVLRPAMVVV 163

Length = 165

>gnl|CDD|223649 COG0576, GrpE, Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

 Score =  155 bits (395), Expect = 1e-46
 Identities = 77/202 (38%), Positives = 112/202 (55%), Gaps = 16/202 (7%)

Query: 118 KASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSF 177
           K  +   E T+  ++S+ +   E E   ++ ++  ++    L A+ EE+K   DK LR+ 
Sbjct: 7   KTEEPDAEETEEAEKSEEEEAEEEEPEEENELEEEQQEIAELEAQLEELK---DKYLRAQ 63

Query: 178 AEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV 237
           AE EN++ RT RE E +KK+AI+ FAK LL V DNL RA    +++        D     
Sbjct: 64  AEFENLRKRTEREREEAKKYAIEKFAKDLLPVIDNLERALEAAEDD-------KDPE--- 113

Query: 238 PLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHV 297
              K+LLEGVEMT  QL +  +K GVE+  P  E FDP+ H A+ ++      P TV  V
Sbjct: 114 ---KALLEGVEMTLDQLLDALEKLGVEEIGPEGEKFDPNLHEAVQRVESEDVEPNTVVEV 170

Query: 298 LKSGYTLYERVIRPAEVGVTQA 319
           L+ GY L +RV+RPA V V + 
Sbjct: 171 LQKGYKLNDRVLRPAMVKVAKK 192

Length = 193

>gnl|CDD|172630 PRK14141, PRK14141, heat shock protein GrpE; Provisional

 Score =  150 bits (381), Expect = 3e-44
 Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 16/180 (8%)

Query: 157 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 216
           E L A+N E+K   D++LR  AEMEN++ RT R+  +++ + I  FA+ +L V+DNL RA
Sbjct: 41  EALKAENAELK---DRMLRLAAEMENLRKRTQRDVADARAYGIAGFARDMLSVSDNLRRA 97

Query: 217 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPH 276
              +        P+   A A   LK+L+EGVEMTE+ +    ++ GV+K DP  + FDP+
Sbjct: 98  LDAI--------PAEARAAADAGLKALIEGVEMTERAMLNALERHGVKKLDPEGQKFDPN 149

Query: 277 RHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ-----AVENDRAENNDQA 331
            H AMF++P+   P  TV  V+++GYT+ ERV+RPA VGV +     A E   + + D A
Sbjct: 150 FHQAMFEVPNPDVPNNTVVQVVQAGYTIGERVLRPAMVGVAKGGPKAAAEAGASTSEDDA 209

Length = 209

>gnl|CDD|184539 PRK14150, PRK14150, heat shock protein GrpE; Provisional

 Score =  125 bits (317), Expect = 5e-35
 Identities = 75/199 (37%), Positives = 107/199 (53%), Gaps = 20/199 (10%)

Query: 121 DEGMEATDRTKESDSDSESEIELS-RDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAE 179
            E +EA    +E   ++E E EL   D  +  L+   +L  A+ EE    +D VLR+ AE
Sbjct: 14  SEEIEAEVEQQEEADEAELEDELDEADARIAELEA--QLAEAQAEE----RDSVLRARAE 67

Query: 180 MENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPL 239
           +EN++ R  ++ E + KFA++ FA  LL V DNL RA           D  N+       
Sbjct: 68  VENIRRRAEQDVEKAHKFALEKFANELLPVIDNLERALQA-------ADKENEA------ 114

Query: 240 LKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLK 299
           LK+L+EGVE+T K L +   KFGVE   P+ EPF+P  H A+         P TV  V++
Sbjct: 115 LKALIEGVELTLKSLLDTVAKFGVEVVGPVGEPFNPEVHQAISMQESEDHEPNTVMMVMQ 174

Query: 300 SGYTLYERVIRPAEVGVTQ 318
            GYTL  R++RPA V V++
Sbjct: 175 KGYTLNGRLLRPAMVMVSK 193

Length = 193

>gnl|CDD|237622 PRK14140, PRK14140, heat shock protein GrpE; Provisional

 Score =  125 bits (315), Expect = 1e-34
 Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 17/194 (8%)

Query: 125 EATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVK 184
              +   E + + E+  E S  +L+   + +   L AK +E++   ++ LR  A+ EN K
Sbjct: 15  TEVEEAVEDEVEEETVEEESEAELLDEEQAKIAELEAKLDELE---ERYLRLQADFENYK 71

Query: 185 DRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLL 244
            R  +E E ++K+  Q+ A  LL   DN  RA        L+I+  ++        KSLL
Sbjct: 72  RRIQKENEAAEKYRAQSLASDLLPALDNFERA--------LQIEADDEQT------KSLL 117

Query: 245 EGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTL 304
           +GVEM  +QL E  KK GVE  + + E FDP+ H A+ Q  D       V   L+ GY L
Sbjct: 118 KGVEMVHRQLLEALKKEGVEVIEAVGEQFDPNLHQAVMQDEDEDFESNEVVEELQKGYKL 177

Query: 305 YERVIRPAEVGVTQ 318
            +RVIRP+ V V Q
Sbjct: 178 KDRVIRPSMVKVNQ 191

Length = 191

>gnl|CDD|237627 PRK14155, PRK14155, heat shock protein GrpE; Provisional

 Score =  117 bits (294), Expect = 1e-31
 Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 12/153 (7%)

Query: 165 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 224
           E+  ++D+ LR  AE EN K R  RE  +++ +AIQ FA+ LL  ADNLGRA++   ++ 
Sbjct: 28  EVAALKDQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAADNLGRATAASPKD- 86

Query: 225 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQ 283
                      A P +K+ + GVEMTEK+L   F++ G++K DP   + FDPH H AM +
Sbjct: 87  ----------SADPAVKNFIIGVEMTEKELLGAFERNGLKKIDPAKGDKFDPHLHQAMME 136

Query: 284 LPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV 316
            P      G V  V+++GY L  R++RPA V V
Sbjct: 137 QPSTEVAAGGVLQVMQAGYELMGRLVRPAMVAV 169

Length = 208

>gnl|CDD|237621 PRK14139, PRK14139, heat shock protein GrpE; Provisional

 Score =  112 bits (282), Expect = 5e-30
 Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 28/211 (13%)

Query: 109 EAPKPNGDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQ 168
           E  + N   + ++E   A      + + +E                 E  L     +  +
Sbjct: 2   ENTQQNPSEQEAEEAGAAAQAAAAAAAAAEDAAP-----------ALEAELAEAEAKAAE 50

Query: 169 MQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKID 228
           +QD  LR+ AE ENV+ R   +   + KFAI++FA++LL V D+L  A        L  +
Sbjct: 51  LQDSFLRAKAETENVRRRAQEDVAKAHKFAIESFAESLLPVKDSLEAA--------LADE 102

Query: 229 PSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNS 288
             +        L+ L EGVE+T KQL   F+K  V + +P+ E FDPH+H A+  +P   
Sbjct: 103 SGD--------LEKLREGVELTLKQLTSAFEKGRVVEINPVGEKFDPHQHQAISMVPAE- 153

Query: 289 KPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 319
           + P TV  VL+ GYT+ +RV+RPA V V   
Sbjct: 154 QEPNTVVAVLQKGYTIADRVLRPALVTVAAP 184

Length = 185

>gnl|CDD|172640 PRK14151, PRK14151, heat shock protein GrpE; Provisional

 Score =  102 bits (256), Expect = 3e-26
 Identities = 54/157 (34%), Positives = 87/157 (55%), Gaps = 13/157 (8%)

Query: 163 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 222
            E++   +D+ LR+ A+++NV+ R  ++ E + KFA++ FA  LL V D+L R       
Sbjct: 33  EEQLAAAKDQSLRAAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPVVDSLERG------ 86

Query: 223 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 282
             L++  ++D A     +K + EGVE+T K   +  K++ +E  DP  EPF+P  H AM 
Sbjct: 87  --LELSSADDEA-----IKPMREGVELTLKMFQDTLKRYQLEAVDPHGEPFNPEHHQAMA 139

Query: 283 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 319
                   P +V  V + GY L  R++RPA V V++A
Sbjct: 140 MQESADVEPNSVLKVFQKGYLLNGRLLRPAMVVVSKA 176

Length = 176

>gnl|CDD|184540 PRK14153, PRK14153, heat shock protein GrpE; Provisional

 Score = 96.1 bits (239), Expect = 8e-24
 Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 20/206 (9%)

Query: 124 MEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAK------NEEMKQMQDKVLRSF 177
           M + +  K+   +SE+    S  +  + LKE  E   A        EE++ +++++ R  
Sbjct: 1   MTSKEVGKDKAENSEARNSGSSAEEAEELKEEPEDSTADSETEKCREEIESLKEQLFRLA 60

Query: 178 AEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV 237
           AE +N + RT RE E ++KF ++     LL+V DN  RA    +        + D     
Sbjct: 61  AEFDNFRKRTAREMEENRKFVLEQVLLDLLEVTDNFERALESART-------AEDMN--- 110

Query: 238 PLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHV 297
               S++EG+EM  KQ   + +K+G+E+ +   E FDPHRH AM  +  +  P  T+  V
Sbjct: 111 ----SIVEGIEMVSKQFFSILEKYGLERIECEGEEFDPHRHEAMMHVETSEVPDNTIVDV 166

Query: 298 LKSGYTLYERVIRPAEVGVTQAVEND 323
            K GY L  +VIRPA V V +  + +
Sbjct: 167 CKPGYALNSKVIRPAMVSVARNPDEE 192

Length = 194

>gnl|CDD|182379 PRK10325, PRK10325, heat shock protein GrpE; Provisional

 Score = 92.4 bits (229), Expect = 2e-22
 Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 19/196 (9%)

Query: 124 MEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENV 183
           M+  +  +  + ++ +E    RD+  K+     +L  A+  E    +D +LR  AEMEN+
Sbjct: 19  MDQHEEIEAVEPEASAEQVDPRDE--KIANLEAQLAEAQTRE----RDGILRVKAEMENL 72

Query: 184 KDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSL 243
           + RT  + E + KFA++ F   LL V D+L RA  V  +             A P + ++
Sbjct: 73  RRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADK-------------ANPDMSAM 119

Query: 244 LEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYT 303
           +EG+E+T K + +V +KFGVE     N P DP+ H A+  +  +   PG V  +++ GYT
Sbjct: 120 VEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYT 179

Query: 304 LYERVIRPAEVGVTQA 319
           L  R IR A V V +A
Sbjct: 180 LNGRTIRAAMVTVAKA 195

Length = 197

>gnl|CDD|237630 PRK14161, PRK14161, heat shock protein GrpE; Provisional

 Score = 90.0 bits (223), Expect = 1e-21
 Identities = 57/184 (30%), Positives = 104/184 (56%), Gaps = 16/184 (8%)

Query: 136 DSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSK 195
           ++E  I    +++V+      E+   K  E+++++DK++R+ AE++N + R  +  + +K
Sbjct: 8   NNEQTINDIAEEIVE--TANPEITALK-AEIEELKDKLIRTTAEIDNTRKRLEKARDEAK 64

Query: 196 KFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLG 255
            +AI  FAK LL+V+DNL RA        L   P+N          +++ GV+MT+ +L 
Sbjct: 65  DYAIATFAKELLNVSDNLSRA--------LAHKPANSDVEVT----NIIAGVQMTKDELD 112

Query: 256 EVFKKFGVEKFDP-INEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEV 314
           +VF K  +E+  P I   FD + HNA+ Q+      P ++  +++SGY + +R++RPA V
Sbjct: 113 KVFHKHHIEEIKPEIGSMFDYNLHNAISQIEHPDHAPNSIITLMQSGYKIRDRLLRPATV 172

Query: 315 GVTQ 318
            V +
Sbjct: 173 QVVK 176

Length = 178

>gnl|CDD|184538 PRK14149, PRK14149, heat shock protein GrpE; Provisional

 Score = 89.5 bits (222), Expect = 2e-21
 Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 31/204 (15%)

Query: 120 SDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAE 179
           S+E   A    +  +    SE E           E +E    K +EM    +K LR  A+
Sbjct: 19  SEEKACACKEQQGEEKQEASEKE----------GEIKEDFELKYKEMH---EKYLRVHAD 65

Query: 180 MENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPL 239
            ENVK R  R+   + ++A +  A  LL V D L  A                +A  V  
Sbjct: 66  FENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGA--------------LKSAAEVDK 111

Query: 240 LKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLK 299
             +L +G+E+T ++L EV  + G+E      E FDP+ HNA+ Q+    K  G +  VL+
Sbjct: 112 ESALTKGLELTMEKLHEVLARHGIEGI-ECLEEFDPNFHNAIMQVKSEEKENGKIVQVLQ 170

Query: 300 SGYTLYERVIRPAEVGVTQAVEND 323
            GY    RV+RPA V +    +ND
Sbjct: 171 QGYKYKGRVLRPAMVSI---AKND 191

Length = 191

>gnl|CDD|184535 PRK14144, PRK14144, heat shock protein GrpE; Provisional

 Score = 89.4 bits (221), Expect = 4e-21
 Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 30/227 (13%)

Query: 92  SPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKL 151
           S +  +D K   D +  E    N   +  +E  +   + +E      S   L        
Sbjct: 2   SKQNKKDWKKFKDEHKEEHKVEN---EILEEETDEESQHQEPALGHPSYTAL-------- 50

Query: 152 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVAD 211
               EE L    ++  +  +K +R+ AE+ENV+ R  RE  N+ K+ ++    ALL V D
Sbjct: 51  ----EEQLTLAEQKAHENWEKSVRALAELENVRRRMEREVANAHKYGVEKLISALLPVVD 106

Query: 212 NLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINE 271
           +L +A  +  +N    DPS            + EG+E+T K   +  +KF VE+ DP+ +
Sbjct: 107 SLEQALQLADKN---SDPS------------MHEGLELTMKLFLDALQKFDVEQIDPLGQ 151

Query: 272 PFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
            FDP +H AM   P    PP +V  V + GY L +RVIRPA V V+ 
Sbjct: 152 TFDPQQHEAMSMQPAPGAPPNSVITVFQKGYKLSDRVIRPARVIVST 198

Length = 199

>gnl|CDD|172646 PRK14158, PRK14158, heat shock protein GrpE; Provisional

 Score = 88.4 bits (219), Expect = 6e-21
 Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 30/220 (13%)

Query: 98  DAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREE 157
           D K    +  AEA K     +A     +       + +D               +KE EE
Sbjct: 2   DKKKHGSHQIAEALKAKAAKEAEAAQGKPEAAQPVAAADR--------------IKELEE 47

Query: 158 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRAS 217
            L AK  E     DK LR  A++EN + R  +E E   K+  ++    +L   DN+ RA 
Sbjct: 48  ALAAKEAEAAANWDKYLRERADLENYRKRVQKEKEELLKYGNESLILEILPAVDNMERA- 106

Query: 218 SVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFD-PINEPFDPH 276
                    +D +++ +     + +++EG+ MT   L    KKFGV   +     PFDP 
Sbjct: 107 ---------LDHADEES-----MSAIIEGIRMTLSMLLSTLKKFGVTPVEAEKGTPFDPA 152

Query: 277 RHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV 316
            H AM Q+    + P TV  V + GY L ER++RPA V V
Sbjct: 153 YHQAMCQVESAEQEPNTVVAVFQKGYLLNERLLRPAMVSV 192

Length = 194

>gnl|CDD|172637 PRK14148, PRK14148, heat shock protein GrpE; Provisional

 Score = 87.9 bits (217), Expect = 1e-20
 Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 23/197 (11%)

Query: 131 KESDSDSESEIELSRDDLVKLLKE---REELLMAKN------EEMKQMQDKVLRSFAEME 181
           K  D ++ +++E +++     L+E    E+L  AK+      +   Q +D+ LR+ AEME
Sbjct: 12  KSLDIETAAQVETAQESASGALEELSVEEQLERAKDTIKELEDSCDQFKDEALRAKAEME 71

Query: 182 NVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLK 241
           N++ R  R+  N++KF I+ FAK LL V D++ +A        LK +   + A A+    
Sbjct: 72  NIRKRAERDVSNARKFGIEKFAKELLPVIDSIEQA--------LKHEVKLEEAIAMK--- 120

Query: 242 SLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSG 301
              EG+E+T K L ++ KK GVE+ DP  E FDP+ H AM  +P+      T+  V + G
Sbjct: 121 ---EGIELTAKMLVDILKKNGVEELDPKGEKFDPNLHEAMAMIPNPEFEDNTIFDVFQKG 177

Query: 302 YTLYERVIRPAEVGVTQ 318
           Y L  R++R A+V + +
Sbjct: 178 YMLNGRIVRAAKVVIVK 194

Length = 195

>gnl|CDD|237629 PRK14160, PRK14160, heat shock protein GrpE; Provisional

 Score = 87.5 bits (217), Expect = 2e-20
 Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 22/218 (10%)

Query: 100 KDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELL 159
           +D    N  +      +     E +E  +  ++S+  +E +IE  +D+  KL +E ++L 
Sbjct: 15  EDCCKENENKEEDKGKEEDLEFEEIEKEEIIEDSEESNEVKIEELKDENNKLKEENKKL- 73

Query: 160 MAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSV 219
                E++ ++D++LR+ AE +N + RT +E E     A ++  K LL V DNL RA++V
Sbjct: 74  ---ENELEALKDRLLRTVAEYDNYRKRTAKEKEGIYSDACEDVLKELLPVLDNLERAAAV 130

Query: 220 VKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHN 279
                          G+V  LK   +G+EMT KQ     +K GVE+     E FDP+ HN
Sbjct: 131 --------------EGSVEDLK---KGIEMTVKQFKTSLEKLGVEEISTEGE-FDPNLHN 172

Query: 280 AMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT 317
           A+  + D +     +  V + GY   ++VIR + V V 
Sbjct: 173 AVMHVEDENYGENEIVEVFQKGYKRGDKVIRYSMVKVA 210

Length = 211

>gnl|CDD|237631 PRK14162, PRK14162, heat shock protein GrpE; Provisional

 Score = 85.3 bits (211), Expect = 9e-20
 Identities = 64/200 (32%), Positives = 95/200 (47%), Gaps = 19/200 (9%)

Query: 120 SDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAE 179
             E        KE+    + E +  ++ +  L KE  +L  AKN   K ++DK LRS AE
Sbjct: 13  PQEETTDEAPKKEAKEAPKEEDQEKQNPVEDLEKEIADL-KAKN---KDLEDKYLRSQAE 68

Query: 180 MENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPL 239
           ++N+++R  +E     K+  Q+ AK +L   DNL RA +V          ++D A     
Sbjct: 69  IQNMQNRYAKERAQLIKYESQSLAKDVLPAMDNLERALAV---------KADDEAA---- 115

Query: 240 LKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLP-DNSKPPGTVAHVL 298
            K L +GV+MT   L +  K  GV +     E FDP  H A+  +  +N      V  VL
Sbjct: 116 -KQLKKGVQMTLDHLVKALKDHGVTEIKADGEKFDPTLHQAVQTVAAENDDQKDHVVQVL 174

Query: 299 KSGYTLYERVIRPAEVGVTQ 318
           + GY   +R +RPA V V Q
Sbjct: 175 QKGYQYKDRTLRPAMVVVAQ 194

Length = 194

>gnl|CDD|237625 PRK14147, PRK14147, heat shock protein GrpE; Provisional

 Score = 83.1 bits (205), Expect = 3e-19
 Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 16/154 (10%)

Query: 165 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 224
           E+  ++   LR  A++EN + R  R+ E ++KFA +     LL V D+L           
Sbjct: 33  EIALVKADALRERADLENQRKRIARDVEQARKFANEKLLGELLPVFDSL----------- 81

Query: 225 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQL 284
              D     AG  P    L +G+E+T KQL +V    G+   DP+ +PF+P  H A+ Q 
Sbjct: 82  ---DAGLTAAGTEP--SPLRDGLELTYKQLLKVAADNGLTLLDPVGQPFNPEHHQAISQG 136

Query: 285 PDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
                 PG V  V + GY L ER++RPA V V +
Sbjct: 137 EAEGVAPGHVVQVFQKGYLLNERLLRPALVVVAK 170

Length = 172

>gnl|CDD|237624 PRK14143, PRK14143, heat shock protein GrpE; Provisional

 Score = 83.6 bits (207), Expect = 8e-19
 Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 13/228 (5%)

Query: 104 DNNGAEAPKPNGDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKN 163
           ++N  E+ +   + +A     E      ES  DS S    +  D    L + E+ L +  
Sbjct: 21  EDNSPESSEEVTEQEAELTNPEGDAAEAESSPDSGSAASETAADNAARLAQLEQELESLK 80

Query: 164 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 223
           +E++++  + +R  A+ +N + RT RE E+ +     N    +L V DN  RA       
Sbjct: 81  QELEELNSQYMRIAADFDNFRKRTSREQEDLRLQLKCNTLSEILPVVDNFERARQ----- 135

Query: 224 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQ 283
             ++ P  + A A  L +S  +G+    KQL +V K+ GV     + + FDP+ H A+ +
Sbjct: 136 --QLKPEGEEAQA--LHRSY-QGLY---KQLVDVLKRLGVSPMRVVGQEFDPNLHEAVLR 187

Query: 284 LPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA 331
            P +  P   V   L+ GY L  RV+R A V V+           DQA
Sbjct: 188 EPSDEHPEDVVLEELQRGYHLGGRVLRHAMVKVSMGPGPSSPAEEDQA 235

Length = 238

>gnl|CDD|237628 PRK14156, PRK14156, heat shock protein GrpE; Provisional

 Score = 79.1 bits (195), Expect = 1e-17
 Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 22/197 (11%)

Query: 124 MEATDRTKESDSDSE-SEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMEN 182
           M    + +E + + E +E E + +++V+   E+ EL +A NE   + ++K LR+ AEM+N
Sbjct: 1   MSEEIKNEEVEEEVEATETEETVEEVVEETPEKSELELA-NERADEFENKYLRAHAEMQN 59

Query: 183 VKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKS 242
           ++ R   E +  +++  Q+ AKA+L   DNL RA +V                   L   
Sbjct: 60  IQRRANEERQQLQRYRSQDLAKAILPSLDNLERALAVEG-----------------LTDD 102

Query: 243 LLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLP-DNSKPPGTVAHVLKSG 301
           + +G+EM ++ L +  K+ GVE+     + FD + H A+  LP D+  P  ++A V + G
Sbjct: 103 VKKGLEMVQESLIQALKEEGVEEVAV--DSFDHNLHMAVQTLPADDEHPADSIAQVFQKG 160

Query: 302 YTLYERVIRPAEVGVTQ 318
           Y L+ER++RPA V V  
Sbjct: 161 YKLHERLLRPAMVVVYN 177

Length = 177

>gnl|CDD|237626 PRK14154, PRK14154, heat shock protein GrpE; Provisional

 Score = 71.8 bits (175), Expect = 8e-15
 Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 18/209 (8%)

Query: 113 PNGDAKASDEG---MEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNE-EMKQ 168
           P  + KA ++    MEA +  +E   D   E+E  R+ L    +E+ E  + + E ++ +
Sbjct: 11  PESETKAKNKWEKVMEAEEEQEEGGGDGSQEMEPHREGLEFPSREKLEGQLTRMERKVDE 70

Query: 169 MQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKID 228
            + + LR+ AEM+N++ R  RE  +  KF  +     LL VAD+L             I 
Sbjct: 71  YKTQYLRAQAEMDNLRKRIEREKADIIKFGSKQLITDLLPVADSL-------------IH 117

Query: 229 PSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQLPDN 287
                A   P +KS+ +G+ +T   L     K GV+  +P   +PFDP  H AM      
Sbjct: 118 GLESPASEDPQVKSMRDGMSLTLDLLHNTLAKHGVQVINPNPGDPFDPALHEAMSVQAVP 177

Query: 288 SKPPGTVAHVLKSGYTLYERVIRPAEVGV 316
              P T+  VL+ GY L  RV+R A V V
Sbjct: 178 DAKPDTIIQVLQKGYQLNGRVLRAARVIV 206

Length = 208

>gnl|CDD|172647 PRK14159, PRK14159, heat shock protein GrpE; Provisional

 Score = 69.7 bits (170), Expect = 3e-14
 Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 18/185 (9%)

Query: 134 DSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAEN 193
           + ++E+   L  ++L  +    +  L    +E+K   DK +R+ AE EN+K R  +E  +
Sbjct: 10  NENAENSEHLQDENLQNIEDVEQNKLQKDYDELK---DKYMRANAEFENIKKRMEKEKLS 66

Query: 194 SKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQ 253
           +  +A ++FAK LLDV D L  A +V   + + +               + EGV+ T   
Sbjct: 67  AMAYANESFAKDLLDVLDALEAAVNVECHDEISL--------------KIKEGVQNTLDL 112

Query: 254 LGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAE 313
             +  +K GV       E FDP+ H AMF +   +   G V  VL+ GY + +RVIRP +
Sbjct: 113 FLKKLEKHGVALIKEEKE-FDPNLHEAMFHVDSENHQSGEVVQVLQKGYKIADRVIRPTK 171

Query: 314 VGVTQ 318
           V V +
Sbjct: 172 VSVAK 176

Length = 176

>gnl|CDD|172635 PRK14146, PRK14146, heat shock protein GrpE; Provisional

 Score = 69.8 bits (170), Expect = 5e-14
 Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 19/213 (8%)

Query: 108 AEAPKPNGDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMK 167
           A+A +    ++  +E       ++ES + +E   E + +        ++EL  AK +E++
Sbjct: 13  AKANEKKSQSQTLEESKLENMNSEESQTITEETQEQAVEGAETETSLQKELDNAK-KEIE 71

Query: 168 QMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKI 227
            ++D   R  AE +N K R+ +E  + +K A+++     L+  DNL R  +         
Sbjct: 72  SLKDSWARERAEFQNFKRRSAQEFVSIRKEAVKSLVSGFLNPIDNLERVGAT-------- 123

Query: 228 DPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDN 287
             +         LK  +EGV+M  K+   V +K  V +FDP  EPFDP    A+     +
Sbjct: 124 -QNQS-----EELKPFVEGVKMILKEFYSVLEKSNVIRFDPKGEPFDPMSMEALSSEEGD 177

Query: 288 SKPPGTVAHVLKSGYTLYE----RVIRPAEVGV 316
                TV  V ++GY   E      +RPA V +
Sbjct: 178 QYSEETVIDVYQAGYYYKENEDKFTLRPARVRI 210

Length = 215

>gnl|CDD|184543 PRK14157, PRK14157, heat shock protein GrpE; Provisional

 Score = 68.1 bits (166), Expect = 2e-13
 Identities = 68/245 (27%), Positives = 111/245 (45%), Gaps = 38/245 (15%)

Query: 74  PEPNEKEQGSAPD--NNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTK 131
           P+ ++ E        ++GA++   + + +DS     A A      A A  E   A ++T 
Sbjct: 14  PDADDLEAQGQAAQASSGADASAESGEQQDSAAQADANAGADAAPAAAEGEAKAAAEKTG 73

Query: 132 ESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREA 191
           E+ SDS+     +   L +  KE  E L A           + R  AE  N ++RT +E 
Sbjct: 74  EAQSDSDD----TLTPLGQAKKEAAEYLEA-----------LQRERAEFINYRNRTQKEQ 118

Query: 192 ENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTE 251
           +  ++  I +   ALL   D++ R    ++E+       +D+  AV              
Sbjct: 119 DRFRQHGIIDVLTALLPALDDIDR----IREH----SEMDDSFKAV-------------A 157

Query: 252 KQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRP 311
            ++ + F+KFGVEKF    E FDP +H+A+   PD      TV  V+++GY + +RVIR 
Sbjct: 158 AKIDKAFEKFGVEKFGEKGEDFDPTKHDAILHKPDPDAEKETVDTVVEAGYRIGDRVIRA 217

Query: 312 AEVGV 316
           A V V
Sbjct: 218 ARVVV 222

Length = 227

>gnl|CDD|184536 PRK14145, PRK14145, heat shock protein GrpE; Provisional

 Score = 67.3 bits (164), Expect = 3e-13
 Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 114 NGDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKV 173
           N + +     + + ++ +    D +++    +   V  ++E ++ L  K  E ++  D  
Sbjct: 9   NKEEEKDVNNLSSNEQMEGPPEDEQAQQNQPQQQTVDEIEELKQKLQQKEVEAQEYLDIA 68

Query: 174 LRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDT 233
            R  AE EN + RT +E     ++  +     LL V DN  RA +   +           
Sbjct: 69  QRLKAEFENYRKRTEKEKSEMVEYGKEQVILELLPVMDNFERALASSGDY---------- 118

Query: 234 AGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGT 293
                   SL EG+E+  +Q  ++  KFGV++ +   + FDP++H+A+ Q     K P  
Sbjct: 119 -------NSLKEGIELIYRQFKKILDKFGVKEIEAEGQIFDPYKHHAVMQEEVEGKQPNE 171

Query: 294 VAHVLKSGYTLYERVIRPAEVGVTQ 318
           +  V + GY L ++VIRP+ V V +
Sbjct: 172 IIEVFQKGYYLKDKVIRPSLVKVAK 196

Length = 196

>gnl|CDD|184546 PRK14163, PRK14163, heat shock protein GrpE; Provisional

 Score = 53.6 bits (128), Expect = 2e-08
 Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 25/173 (14%)

Query: 146 DDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKA 205
                L  + +++  A  E    +Q    R  AE +N + R  R+    K+ A+ N    
Sbjct: 40  AATAGLTAQLDQVRTALGERTADLQ----RLQAEYQNYRRRVERDRVTVKEIAVANLLSE 95

Query: 206 LLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEK 265
           LL V D++GRA               +    V   KS+ E +E T  +LG   ++FG E 
Sbjct: 96  LLPVLDDVGRA--------------REHGELVGGFKSVAESLETTVAKLG--LQQFGKE- 138

Query: 266 FDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
                EPFDP  H A+           T   +L+ GY + ER IRPA V V +
Sbjct: 139 ----GEPFDPTIHEALMHSYAPDVTETTCVAILQPGYRIGERTIRPARVAVAE 187

Length = 214

>gnl|CDD|237632 PRK14164, PRK14164, heat shock protein GrpE; Provisional

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 27/231 (11%)

Query: 85  PDNNGA-ESPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESDSDSESEIEL 143
           PDN G  E+  P   + D  +    EA    G     ++         E D D E+++E 
Sbjct: 8   PDNPGDPENTDPEATSADRAEAAAEEAALAQG---VPEDDPFGDAVEGEIDPDLEADLED 64

Query: 144 SRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFA 203
             DD+   L +  E    +  ++ +  + + R  AE  N + RT RE +   + A    A
Sbjct: 65  LLDDVDPELADDGEASTVE-AQLAERTEDLQRVTAEYANYRRRTERERQAIIETAKAGVA 123

Query: 204 KALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGV 263
             LL + D+L  A    +   L   P          LK+       ++K L  V     V
Sbjct: 124 TDLLPILDDLDLAE---QHGDLNEGP----------LKA------FSDK-LTNVLAGLKV 163

Query: 264 EKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEV 314
           EKF    + FDP  H A+  L  +S     +  VL+ GY + +RV+R A V
Sbjct: 164 EKFGEEGDAFDPEIHEAVQDL--SSGDEKVLGTVLRKGYRMGDRVLRTAMV 212

Length = 218

>gnl|CDD|237623 PRK14142, PRK14142, heat shock protein GrpE; Provisional

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 25/169 (14%)

Query: 161 AKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVV 220
              +++ ++   + R  A+  N + R +R+ + +   A  +    LL V D+L RA    
Sbjct: 44  HTEDKVAELTADLQRVQADFANYRKRALRDQQAAADRAKASVVSQLLGVLDDLERAR--- 100

Query: 221 KENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNA 280
           K   L+  P          LKS+ + ++     LG V   FG E      E FDP  H A
Sbjct: 101 KHGDLESGP----------LKSVADKLDSALTGLGLV--AFGAE-----GEDFDPVLHEA 143

Query: 281 MFQLPDN---SKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAE 326
           +    D    SKP   +  V++ GY L E+V+R A VGV   V  D AE
Sbjct: 144 VQHEGDGGQGSKP--VIGTVMRQGYQLGEQVLRHALVGVVDTVVVDAAE 190

Length = 223

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	331
PRK14143	238	heat shock protein GrpE; Provisional	100.0
PRK14148	195	heat shock protein GrpE; Provisional	100.0
PRK14161	178	heat shock protein GrpE; Provisional	100.0
PRK14141	209	heat shock protein GrpE; Provisional	100.0
PRK14153	194	heat shock protein GrpE; Provisional	100.0
PRK14155	208	heat shock protein GrpE; Provisional	100.0
PRK14147	172	heat shock protein GrpE; Provisional	100.0
PRK14151	176	heat shock protein GrpE; Provisional	100.0
PRK14163	214	heat shock protein GrpE; Provisional	100.0
PRK14140	191	heat shock protein GrpE; Provisional	100.0
PRK14158	194	heat shock protein GrpE; Provisional	100.0
PRK14139	185	heat shock protein GrpE; Provisional	100.0
PRK14160	211	heat shock protein GrpE; Provisional	100.0
PRK14162	194	heat shock protein GrpE; Provisional	100.0
PRK14145	196	heat shock protein GrpE; Provisional	100.0
PRK14150	193	heat shock protein GrpE; Provisional	100.0
PRK14146	215	heat shock protein GrpE; Provisional	100.0
COG0576	193	GrpE Molecular chaperone GrpE (heat shock protein)	100.0
PRK14144	199	heat shock protein GrpE; Provisional	100.0
PRK14159	176	heat shock protein GrpE; Provisional	100.0
PRK14154	208	heat shock protein GrpE; Provisional	100.0
PRK10325	197	heat shock protein GrpE; Provisional	100.0
PRK14149	191	heat shock protein GrpE; Provisional	100.0
PRK14157	227	heat shock protein GrpE; Provisional	100.0
KOG3003	236	consensus Molecular chaperone of the GrpE family [	100.0
PRK14156	177	heat shock protein GrpE; Provisional	100.0
PRK14142	223	heat shock protein GrpE; Provisional	100.0
PRK14164	218	heat shock protein GrpE; Provisional	100.0
cd00446	137	GrpE GrpE is the adenine nucleotide exchange facto	100.0
PF01025	165	GrpE: GrpE; InterPro: IPR000740 Molecular chaperon	100.0
PF06156	107	DUF972: Protein of unknown function (DUF972); Inte	84.29

>PRK14143 heat shock protein GrpE; Provisional

Probab=100.00  E-value=4.7e-47  Score=353.80  Aligned_cols=168  Identities=27%  Similarity=0.391  Sum_probs=150.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccC
Q 020069          148 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKI  227 (331)
Q Consensus       148 L~k~v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski  227 (331)
                      ..+.+..++++|+.+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+++..    
T Consensus        65 ~~~~~~~l~~el~~l~~e~~elkd~~lR~~AdfeN~RKR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl~~~~~~----  140 (238)
T PRK14143         65 NAARLAQLEQELESLKQELEELNSQYMRIAADFDNFRKRTSREQEDLRLQLKCNTLSEILPVVDNFERARQQLKPE----  140 (238)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhccccc----
Confidence            3345556667788889999999999999999999999999999999999999999999999999999999865321    


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCe
Q 020069          228 DPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYER  307 (331)
Q Consensus       228 ~~s~d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dR  307 (331)
                         .      .....|.+||+||+++|.++|+++||++|+++|++|||++|+||++++++++++|||++|+|+||+|+||
T Consensus       141 ---~------~~~~~l~~Gve~i~k~l~~~L~k~GV~~i~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~~R  211 (238)
T PRK14143        141 ---G------EEAQALHRSYQGLYKQLVDVLKRLGVSPMRVVGQEFDPNLHEAVLREPSDEHPEDVVLEELQRGYHLGGR  211 (238)
T ss_pred             ---c------hhHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCCCChHHhheeeeecCCCCCcCeEEEEeeCCceeCCE
Confidence               1      1236799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeeEEEeecCCCCcccccc
Q 020069          308 VIRPAEVGVTQAVENDRAENN  328 (331)
Q Consensus       308 VLRPA~VvVsK~~~~~~~~~~  328 (331)
                      |||||+|+|++++....++..
T Consensus       212 VLRpA~V~Vsk~~~~~~~~~~  232 (238)
T PRK14143        212 VLRHAMVKVSMGPGPSSPAEE  232 (238)
T ss_pred             ecccceEEECCCCCCCCCCCc
Confidence            999999999998775555433

>PRK14148 heat shock protein GrpE; Provisional

Probab=100.00  E-value=5.6e-47  Score=344.24  Aligned_cols=157  Identities=34%  Similarity=0.549  Sum_probs=144.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCC
Q 020069          149 VKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKID  228 (331)
Q Consensus       149 ~k~v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~  228 (331)
                      .+.+..+++.++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+..     
T Consensus        39 ~~e~~~l~~~l~~l~~e~~elkd~~lR~~Ae~eN~rKR~~rE~e~~~~~a~~~~~~~LLpV~DnlerAl~~~~~~-----  113 (195)
T PRK14148         39 EEQLERAKDTIKELEDSCDQFKDEALRAKAEMENIRKRAERDVSNARKFGIEKFAKELLPVIDSIEQALKHEVKL-----  113 (195)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc-----
Confidence            345566667788899999999999999999999999999999999999999999999999999999999864320     


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCee
Q 020069          229 PSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERV  308 (331)
Q Consensus       229 ~s~d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRV  308 (331)
                               ....+|++||+||+++|.++|+++||++|+|+|++|||++|+||++++++++++|+|++|+|+||+|+|||
T Consensus       114 ---------~~~~~l~~Gv~mi~k~l~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRV  184 (195)
T PRK14148        114 ---------EEAIAMKEGIELTAKMLVDILKKNGVEELDPKGEKFDPNLHEAMAMIPNPEFEDNTIFDVFQKGYMLNGRI  184 (195)
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhheeeeeCCCCCCcCEEEEEeeCCcEeCCEe
Confidence                     12468999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeEEEeecC
Q 020069          309 IRPAEVGVTQA  319 (331)
Q Consensus       309 LRPA~VvVsK~  319 (331)
                      ||||+|+|++.
T Consensus       185 LRpA~V~Vak~  195 (195)
T PRK14148        185 VRAAKVVIVKN  195 (195)
T ss_pred             eeccEEEeCCC
Confidence            99999999873

>PRK14161 heat shock protein GrpE; Provisional

Probab=100.00  E-value=6.5e-47  Score=339.66  Aligned_cols=160  Identities=32%  Similarity=0.574  Sum_probs=147.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCC
Q 020069          149 VKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKID  228 (331)
Q Consensus       149 ~k~v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~  228 (331)
                      .+-++..+++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.+     
T Consensus        18 ~~~~~~~~~ei~~l~~e~~elkd~~lR~~AefeN~rkR~~ke~~~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~-----   92 (178)
T PRK14161         18 EEIVETANPEITALKAEIEELKDKLIRTTAEIDNTRKRLEKARDEAKDYAIATFAKELLNVSDNLSRALAHKPAN-----   92 (178)
T ss_pred             HhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcCccc-----
Confidence            456677778889999999999999999999999999999999999999999999999999999999999865321     


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCe
Q 020069          229 PSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYER  307 (331)
Q Consensus       229 ~s~d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~Idp-vGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dR  307 (331)
                        .     ...+.++++||+||+++|.++|+++||++|+| +|++|||++||||+++++++.++|||++|+|+||+|+||
T Consensus        93 --~-----~~~~~~~~~Gv~mi~k~l~~vL~~~Gv~~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVi~v~q~GY~l~dR  165 (178)
T PRK14161         93 --S-----DVEVTNIIAGVQMTKDELDKVFHKHHIEEIKPEIGSMFDYNLHNAISQIEHPDHAPNSIITLMQSGYKIRDR  165 (178)
T ss_pred             --c-----chhHHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCCCChHHhhhheeeCCCCCCcCEEEEEeeCCcEeCCE
Confidence              0     12356899999999999999999999999999 799999999999999999999999999999999999999


Q ss_pred             eeeeeEEEeecCC
Q 020069          308 VIRPAEVGVTQAV  320 (331)
Q Consensus       308 VLRPA~VvVsK~~  320 (331)
                      |||||+|+|+++|
T Consensus       166 VLRpA~V~Vak~~  178 (178)
T PRK14161        166 LLRPATVQVVKKP  178 (178)
T ss_pred             eecCceEEeCCCC
Confidence            9999999999864

>PRK14141 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.6e-46  Score=344.42  Aligned_cols=157  Identities=41%  Similarity=0.677  Sum_probs=141.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCch
Q 020069          158 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV  237 (331)
Q Consensus       158 ~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~~  237 (331)
                      +|+.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.+       .+ ...+
T Consensus        39 ~i~~le~e~~elkd~~lR~~Ae~eN~RKR~~kE~e~~~~~a~~~~~~dLLpViDnLerAl~~~~~~-------~~-~~~~  110 (209)
T PRK14141         39 PLEALKAENAELKDRMLRLAAEMENLRKRTQRDVADARAYGIAGFARDMLSVSDNLRRALDAIPAE-------AR-AAAD  110 (209)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhccccc-------cc-cccc
Confidence            345567788899999999999999999999999999999999999999999999999999875431       00 0112


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEee
Q 020069          238 PLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT  317 (331)
Q Consensus       238 ~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvVs  317 (331)
                      +.+++|++||+||+++|.++|+++||++|+++|++|||++||||++++++++++|||++|+|+||+|+|||||||+|+|+
T Consensus       111 ~~~~~l~eGv~mi~k~l~~vLek~GV~~I~~~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRpA~V~Vs  190 (209)
T PRK14141        111 AGLKALIEGVEMTERAMLNALERHGVKKLDPEGQKFDPNFHQAMFEVPNPDVPNNTVVQVVQAGYTIGERVLRPAMVGVA  190 (209)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCChHHhceeeeecCCCCCcCEEEEEeeCCcEeCCEeecccEEEEC
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 020069          318 QAVEN  322 (331)
Q Consensus       318 K~~~~  322 (331)
                      ++++.
T Consensus       191 k~~~~  195 (209)
T PRK14141        191 KGGPK  195 (209)
T ss_pred             CCCCC
Confidence            96643

>PRK14153 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.3e-46  Score=341.56  Aligned_cols=156  Identities=34%  Similarity=0.594  Sum_probs=143.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCC
Q 020069          153 KEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSND  232 (331)
Q Consensus       153 ~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d  232 (331)
                      ......++.+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+.+.+         
T Consensus        36 ~~~~~ei~~l~~e~~elkd~~lR~~AEfeN~rKR~~kE~e~~~~~a~~~~~~~LLpv~DnLerAl~~~~~~---------  106 (194)
T PRK14153         36 STADSETEKCREEIESLKEQLFRLAAEFDNFRKRTAREMEENRKFVLEQVLLDLLEVTDNFERALESARTA---------  106 (194)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc---------
Confidence            34445567788899999999999999999999999999999999999999999999999999999864321         


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeee
Q 020069          233 TAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPA  312 (331)
Q Consensus       233 ~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA  312 (331)
                           ..+.+|++||+||+++|.++|+++||++|+|+|++|||++|+||+++++++.++|||++|+|+||+|+|||||||
T Consensus       107 -----~~~~~l~~Gvemi~k~~~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVi~V~qkGY~l~dRVLRPA  181 (194)
T PRK14153        107 -----EDMNSIVEGIEMVSKQFFSILEKYGLERIECEGEEFDPHRHEAMMHVETSEVPDNTIVDVCKPGYALNSKVIRPA  181 (194)
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCCCChhHhceeeeeCCCCCCcCEEEEEeeCCcEeCCEEeeCc
Confidence                 225789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeecCCCC
Q 020069          313 EVGVTQAVEN  322 (331)
Q Consensus       313 ~VvVsK~~~~  322 (331)
                      +|+|+++++.
T Consensus       182 ~V~Vak~~~e  191 (194)
T PRK14153        182 MVSVARNPDE  191 (194)
T ss_pred             EEEECCCCcc
Confidence            9999997654

>PRK14155 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.7e-46  Score=344.05  Aligned_cols=156  Identities=40%  Similarity=0.647  Sum_probs=141.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCch
Q 020069          158 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV  237 (331)
Q Consensus       158 ~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~~  237 (331)
                      +|+.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...+           ..+
T Consensus        21 ~l~~le~e~~elkd~~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~~-----------~~~   89 (208)
T PRK14155         21 EIEALKAEVAALKDQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAADNLGRATAASPKD-----------SAD   89 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHhccccc-----------ccc
Confidence            355577888899999999999999999999999999999999999999999999999999875421           012


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEe
Q 020069          238 PLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV  316 (331)
Q Consensus       238 ~~lk~l~eGVemi~kqL~~vL~k~GVe~Idp-vGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvV  316 (331)
                      +.+++|++||+||+++|.++|+++||++|+| +|++|||++||||+++++++.++|||++|+|+||+|+|||||||+|+|
T Consensus        90 ~~~~~i~~Gvemi~k~~~~~L~k~GV~~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVi~V~qkGY~l~dRVLRPA~V~V  169 (208)
T PRK14155         90 PAVKNFIIGVEMTEKELLGAFERNGLKKIDPAKGDKFDPHLHQAMMEQPSTEVAAGGVLQVMQAGYELMGRLVRPAMVAV  169 (208)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHCCCceecCCCCCCCChhHhceeeeecCCCCCcCeEEEEeeCCeEeCCEeeccceEEE
Confidence            3467899999999999999999999999999 899999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCcc
Q 020069          317 TQAVENDR  324 (331)
Q Consensus       317 sK~~~~~~  324 (331)
                      +++++...
T Consensus       170 ak~~~~~~  177 (208)
T PRK14155        170 AAKGSTGP  177 (208)
T ss_pred             CCCCCccc
Confidence            99765443

>PRK14147 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.8e-46  Score=335.15  Aligned_cols=146  Identities=33%  Similarity=0.508  Sum_probs=136.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCch
Q 020069          158 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV  237 (331)
Q Consensus       158 ~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~~  237 (331)
                      .|+.+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+...               
T Consensus        26 ~l~~l~~e~~elkd~~lR~~Ad~eN~rkR~~kE~e~~~~~a~~~~~~~lLpv~DnlerAl~~~~~---------------   90 (172)
T PRK14147         26 EVESLRSEIALVKADALRERADLENQRKRIARDVEQARKFANEKLLGELLPVFDSLDAGLTAAGT---------------   90 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccc---------------
Confidence            35567788899999999999999999999999999999999999999999999999999975321               


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEee
Q 020069          238 PLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT  317 (331)
Q Consensus       238 ~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvVs  317 (331)
                       ...+|++||+||+++|.++|+++||++|+++|++|||++||||+++++++.++|+|++|+|+||+|+|||||||+|+|+
T Consensus        91 -~~~~l~~Gv~mi~k~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~g~Vv~v~qkGY~l~~RvLRpA~V~Va  169 (172)
T PRK14147         91 -EPSPLRDGLELTYKQLLKVAADNGLTLLDPVGQPFNPEHHQAISQGEAEGVAPGHVVQVFQKGYLLNERLLRPALVVVA  169 (172)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChHHhceeeeecCCCCCcCEEEEEeeCCcEeCCEeccCceEEeC
Confidence             1357999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cC
Q 020069          318 QA  319 (331)
Q Consensus       318 K~  319 (331)
                      ++
T Consensus       170 k~  171 (172)
T PRK14147        170 KQ  171 (172)
T ss_pred             CC
Confidence            75

>PRK14151 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2e-46  Score=335.93  Aligned_cols=149  Identities=34%  Similarity=0.568  Sum_probs=138.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCc
Q 020069          157 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGA  236 (331)
Q Consensus       157 e~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~  236 (331)
                      ++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...             .
T Consensus        27 ~~i~~le~e~~el~d~~lR~~Ae~eN~rkR~~kE~e~~~~~a~~~~~~~LLpv~DnlerAl~~~~~-------------~   93 (176)
T PRK14151         27 ARVQELEEQLAAAKDQSLRAAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPVVDSLERGLELSSA-------------D   93 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc-------------c
Confidence            345567788899999999999999999999999999999999999999999999999999986431             0


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEe
Q 020069          237 VPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV  316 (331)
Q Consensus       237 ~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvV  316 (331)
                      +..+++|++||+||+++|.++|+++||++|+++|++|||++||||+++++++.++|||+.|+|+||+|||||||||+|+|
T Consensus        94 ~~~~~~~~~Gv~mi~k~l~~~L~k~Gv~~i~~~G~~FDP~~HEAv~~~~~~~~~~gtI~~v~qkGY~l~dRvLRpA~V~V  173 (176)
T PRK14151         94 DEAIKPMREGVELTLKMFQDTLKRYQLEAVDPHGEPFNPEHHQAMAMQESADVEPNSVLKVFQKGYLLNGRLLRPAMVVV  173 (176)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhhcceeeCCCCCCcCeEEEEeeCCcEECCEEecCcEEEe
Confidence            12357899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ec
Q 020069          317 TQ  318 (331)
Q Consensus       317 sK  318 (331)
                      ++
T Consensus       174 ak  175 (176)
T PRK14151        174 SK  175 (176)
T ss_pred             cC
Confidence            97

>PRK14163 heat shock protein GrpE; Provisional

Probab=100.00  E-value=4e-46  Score=342.47  Aligned_cols=151  Identities=28%  Similarity=0.419  Sum_probs=140.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCC
Q 020069          154 EREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDT  233 (331)
Q Consensus       154 e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~  233 (331)
                      .+++.|..+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.             
T Consensus        44 ~l~~~l~~l~~e~~el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~-------------  110 (214)
T PRK14163         44 GLTAQLDQVRTALGERTADLQRLQAEYQNYRRRVERDRVTVKEIAVANLLSELLPVLDDVGRAREHG-------------  110 (214)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhch-------------
Confidence            3444566788889999999999999999999999999999999999999999999999999998631             


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeE
Q 020069          234 AGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAE  313 (331)
Q Consensus       234 ~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~  313 (331)
                              .|++||+||+++|.++|+++||++|+++|++|||++|+||+++++++.++|+|++|+|+||+|+|||||||+
T Consensus       111 --------~l~~Gv~mi~k~l~~~L~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~~RVLRPA~  182 (214)
T PRK14163        111 --------ELVGGFKSVAESLETTVAKLGLQQFGKEGEPFDPTIHEALMHSYAPDVTETTCVAILQPGYRIGERTIRPAR  182 (214)
T ss_pred             --------hHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhceeeeecCCCCCcCEEEEEeeCCcCcCCEeccCce
Confidence                    489999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeecCCCCccc
Q 020069          314 VGVTQAVENDRA  325 (331)
Q Consensus       314 VvVsK~~~~~~~  325 (331)
                      |+|+++++..++
T Consensus       183 V~Vsk~~~~~~~  194 (214)
T PRK14163        183 VAVAEPQPGAQT  194 (214)
T ss_pred             EEECCCCCCCCC
Confidence            999998665554

>PRK14140 heat shock protein GrpE; Provisional

Probab=100.00  E-value=5.3e-46  Score=336.92  Aligned_cols=154  Identities=38%  Similarity=0.552  Sum_probs=141.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCC
Q 020069          151 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPS  230 (331)
Q Consensus       151 ~v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s  230 (331)
                      ++.+++..+.++++++++++++|+|++|||+|||||++||++.+++||+++|+++||||+|||+||+.+.+.        
T Consensus        38 ~~~~l~~~i~~l~~ei~elkd~~lR~~Ae~eN~rkR~~rE~~~~~~~a~~~~~~~LLpvlDnLerAl~~~~~--------  109 (191)
T PRK14140         38 LLDEEQAKIAELEAKLDELEERYLRLQADFENYKRRIQKENEAAEKYRAQSLASDLLPALDNFERALQIEAD--------  109 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc--------
Confidence            444455567778899999999999999999999999999999999999999999999999999999986321        


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeee
Q 020069          231 NDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIR  310 (331)
Q Consensus       231 ~d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLR  310 (331)
                            ++.+++|++||+||+++|.++|+++||++|+++|++|||++|+||+++++++.++|||+.|+|+||+|+|||||
T Consensus       110 ------~~~~~~i~~Gv~mi~k~l~~~L~k~GV~~i~~~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLR  183 (191)
T PRK14140        110 ------DEQTKSLLKGVEMVHRQLLEALKKEGVEVIEAVGEQFDPNLHQAVMQDEDEDFESNEVVEELQKGYKLKDRVIR  183 (191)
T ss_pred             ------cchHHHHHHHHHHHHHHHHHHHHHCCCEeeCCCCCCCChHHhccceeeCCCCCCcCeEEEEeeCCeEeCCEEec
Confidence                  12357899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEEeec
Q 020069          311 PAEVGVTQ  318 (331)
Q Consensus       311 PA~VvVsK  318 (331)
                      ||+|+|++
T Consensus       184 pA~V~Vak  191 (191)
T PRK14140        184 PSMVKVNQ  191 (191)
T ss_pred             CcEEEeCC
Confidence            99999985

>PRK14158 heat shock protein GrpE; Provisional

Probab=100.00  E-value=5e-46  Score=337.78  Aligned_cols=152  Identities=38%  Similarity=0.555  Sum_probs=140.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCC
Q 020069          152 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN  231 (331)
Q Consensus       152 v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~  231 (331)
                      +..+++.+..+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...         
T Consensus        42 ~~~le~~l~~le~e~~el~d~~lR~~AefeN~RkR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl~~~~~---------  112 (194)
T PRK14158         42 IKELEEALAAKEAEAAANWDKYLRERADLENYRKRVQKEKEELLKYGNESLILEILPAVDNMERALDHADE---------  112 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhccCc---------
Confidence            44555667778899999999999999999999999999999999999999999999999999999975321         


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeee
Q 020069          232 DTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIR  310 (331)
Q Consensus       232 d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~Idp-vGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLR  310 (331)
                            ..+++|++||+||+++|.++|+++||++|++ +|++|||++||||+++++++.++|||++|+|+||+|+|||||
T Consensus       113 ------~~~~~i~~Gv~mi~k~l~~vLek~Gv~~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~dRVLR  186 (194)
T PRK14158        113 ------ESMSAIIEGIRMTLSMLLSTLKKFGVTPVEAEKGTPFDPAYHQAMCQVESAEQEPNTVVAVFQKGYLLNERLLR  186 (194)
T ss_pred             ------chHHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCCCChHHhhhheeecCCCCCcCEEEEEeeCCcEeCCEEee
Confidence                  1247899999999999999999999999998 799999999999999999999999999999999999999999


Q ss_pred             eeEEEeec
Q 020069          311 PAEVGVTQ  318 (331)
Q Consensus       311 PA~VvVsK  318 (331)
                      ||+|+|+|
T Consensus       187 pA~V~VsK  194 (194)
T PRK14158        187 PAMVSVAT  194 (194)
T ss_pred             cceeEeCC
Confidence            99999985

>PRK14139 heat shock protein GrpE; Provisional

Probab=100.00  E-value=8.3e-46  Score=334.23  Aligned_cols=146  Identities=41%  Similarity=0.607  Sum_probs=135.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCc
Q 020069          157 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGA  236 (331)
Q Consensus       157 e~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~  236 (331)
                      .+++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+..               
T Consensus        39 ~~l~~le~e~~elkd~~lR~~AefeN~rKR~~kE~e~~~~~a~~~~~~~LLpv~DnLerAl~~~~---------------  103 (185)
T PRK14139         39 AELAEAEAKAAELQDSFLRAKAETENVRRRAQEDVAKAHKFAIESFAESLLPVKDSLEAALADES---------------  103 (185)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccc---------------
Confidence            34566788889999999999999999999999999999999999999999999999999996421               


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEe
Q 020069          237 VPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV  316 (331)
Q Consensus       237 ~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvV  316 (331)
                       ..+.+|++||+||+++|.++|+++||++|+++|++|||++||||+++++ +.++|||++|+|+||+|+|||||||+|+|
T Consensus       104 -~~~~~l~~Gv~mi~k~l~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~-~~~~gtVi~V~qkGY~l~dRVLRPA~V~V  181 (185)
T PRK14139        104 -GDLEKLREGVELTLKQLTSAFEKGRVVEINPVGEKFDPHQHQAISMVPA-EQEPNTVVAVLQKGYTIADRVLRPALVTV  181 (185)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHHCCCceeCCCCCCCChHHhheeeeecC-CCCcCEEEEEeeCCcEeCCEeccCceEEe
Confidence             1246899999999999999999999999999999999999999999998 67999999999999999999999999999


Q ss_pred             ecC
Q 020069          317 TQA  319 (331)
Q Consensus       317 sK~  319 (331)
                      ++.
T Consensus       182 ak~  184 (185)
T PRK14139        182 AAP  184 (185)
T ss_pred             CCC
Confidence            984

>PRK14160 heat shock protein GrpE; Provisional

Probab=100.00  E-value=9e-46  Score=339.75  Aligned_cols=160  Identities=32%  Similarity=0.459  Sum_probs=149.0

Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhh
Q 020069          141 IELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVV  220 (331)
Q Consensus       141 ~~ls~deL~k~v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~  220 (331)
                      .+....++.+.+..+++.++.+++++++++++|+|++|||+|||||+.||++.+++||+++|+++||||+|||+||+.+.
T Consensus        52 ~~~~~~~l~~e~~~l~~~l~~l~~e~~elkd~~lR~~AefeN~RKR~~kE~e~~~~~a~e~~~~~LLpVlDnLerAl~~~  131 (211)
T PRK14160         52 NEVKIEELKDENNKLKEENKKLENELEALKDRLLRTVAEYDNYRKRTAKEKEGIYSDACEDVLKELLPVLDNLERAAAVE  131 (211)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcc
Confidence            44556677888888999999999999999999999999999999999999999999999999999999999999999752


Q ss_pred             hhhcccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeec
Q 020069          221 KENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKS  300 (331)
Q Consensus       221 ~~~~ski~~s~d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqk  300 (331)
                      .                 ....|++||+||+++|.++|+++||++|++.| +|||++|+||+++++++.++|||++|+|+
T Consensus       132 ~-----------------~~~~l~~Gv~mi~kql~~vL~k~GVe~I~~~G-~FDP~~HEAv~~~~~~e~~~gtVveV~qk  193 (211)
T PRK14160        132 G-----------------SVEDLKKGIEMTVKQFKTSLEKLGVEEISTEG-EFDPNLHNAVMHVEDENYGENEIVEVFQK  193 (211)
T ss_pred             c-----------------chhHHHHHHHHHHHHHHHHHHHCCCEEeCCCC-CCChHHhceeeeeCCCCCCcCeEEEEeeC
Confidence            1                 12479999999999999999999999999999 89999999999999999999999999999


Q ss_pred             ceeeCCeeeeeeEEEeec
Q 020069          301 GYTLYERVIRPAEVGVTQ  318 (331)
Q Consensus       301 GY~L~dRVLRPA~VvVsK  318 (331)
                      ||+|||||||||+|+|++
T Consensus       194 GY~l~dRVLRpA~V~Va~  211 (211)
T PRK14160        194 GYKRGDKVIRYSMVKVAN  211 (211)
T ss_pred             CcEeCCEeeecceEEeCC
Confidence            999999999999999984

>PRK14162 heat shock protein GrpE; Provisional

Probab=100.00  E-value=9e-46  Score=336.13  Aligned_cols=149  Identities=34%  Similarity=0.479  Sum_probs=136.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCC
Q 020069          156 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAG  235 (331)
Q Consensus       156 ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~  235 (331)
                      +..++.+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+.+.             
T Consensus        45 ~~~l~~l~~e~~elkd~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~-------------  111 (194)
T PRK14162         45 EKEIADLKAKNKDLEDKYLRSQAEIQNMQNRYAKERAQLIKYESQSLAKDVLPAMDNLERALAVKAD-------------  111 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc-------------
Confidence            3445667888899999999999999999999999999999999999999999999999999986432             


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCC-CCCCCceeEEeecceeeCCeeeeeeEE
Q 020069          236 AVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDN-SKPPGTVAHVLKSGYTLYERVIRPAEV  314 (331)
Q Consensus       236 ~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~-d~~~gTVveVvqkGY~L~dRVLRPA~V  314 (331)
                       +..+++|++||+||+++|.++|.++||++|+++|++|||++|+||++++++ +.++|||++|+|+||+|||||||||+|
T Consensus       112 -~~~~~~l~~Gvemi~k~l~~vL~~~GV~~I~~~G~~FDP~~HEAv~~~~~~~~~~~gtVv~v~qkGY~l~dRVLRpA~V  190 (194)
T PRK14162        112 -DEAAKQLKKGVQMTLDHLVKALKDHGVTEIKADGEKFDPTLHQAVQTVAAENDDQKDHVVQVLQKGYQYKDRTLRPAMV  190 (194)
T ss_pred             -chhHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhhhheeecCCCCCCcCEEEEEeeCCcEeCCEeeecceE
Confidence             123478999999999999999999999999999999999999999999975 689999999999999999999999999


Q ss_pred             Eeec
Q 020069          315 GVTQ  318 (331)
Q Consensus       315 vVsK  318 (331)
                      +|++
T Consensus       191 ~Vak  194 (194)
T PRK14162        191 VVAQ  194 (194)
T ss_pred             EeCC
Confidence            9985

>PRK14145 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.2e-45  Score=335.65  Aligned_cols=150  Identities=32%  Similarity=0.487  Sum_probs=139.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCC
Q 020069          152 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN  231 (331)
Q Consensus       152 v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~  231 (331)
                      +..+.+.+..+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+..          
T Consensus        47 ~~~l~~~l~~le~e~~el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~e~~~~~LLpV~DnLerAl~~~~----------  116 (196)
T PRK14145         47 IEELKQKLQQKEVEAQEYLDIAQRLKAEFENYRKRTEKEKSEMVEYGKEQVILELLPVMDNFERALASSG----------  116 (196)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhccc----------
Confidence            3445556777889999999999999999999999999999999999999999999999999999997521          


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeee
Q 020069          232 DTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRP  311 (331)
Q Consensus       232 d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRP  311 (331)
                             ....|.+||+||+++|.++|+++||++|+++|++|||++|+||++++++++++|||+.|+|+||+|+||||||
T Consensus       117 -------~~~~l~~Gv~mi~k~l~~vL~k~GVe~I~~~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRP  189 (196)
T PRK14145        117 -------DYNSLKEGIELIYRQFKKILDKFGVKEIEAEGQIFDPYKHHAVMQEEVEGKQPNEIIEVFQKGYYLKDKVIRP  189 (196)
T ss_pred             -------cHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCchhhheeeeeCCCCCCcCEEEEEeeCCcEeCCEeecc
Confidence                   1357999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEeec
Q 020069          312 AEVGVTQ  318 (331)
Q Consensus       312 A~VvVsK  318 (331)
                      |+|+|++
T Consensus       190 A~V~Vak  196 (196)
T PRK14145        190 SLVKVAK  196 (196)
T ss_pred             ceEEeCC
Confidence            9999985

>PRK14150 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2e-45  Score=333.60  Aligned_cols=153  Identities=41%  Similarity=0.618  Sum_probs=136.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCC
Q 020069          150 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP  229 (331)
Q Consensus       150 k~v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~  229 (331)
                      ..+.++++++..+++   +++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...       
T Consensus        41 ~~i~~l~~~l~~~~~---~~kd~~lR~~AefeN~rkR~~kE~~~~~~~a~~~~~~~lL~v~DnlerAl~~~~~-------  110 (193)
T PRK14150         41 ARIAELEAQLAEAQA---EERDSVLRARAEVENIRRRAEQDVEKAHKFALEKFANELLPVIDNLERALQAADK-------  110 (193)
T ss_pred             HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhcccc-------
Confidence            444555555554443   6899999999999999999999999999999999999999999999999975421       


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeee
Q 020069          230 SNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVI  309 (331)
Q Consensus       230 s~d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVL  309 (331)
                            .+..+++|++||+||+++|.++|+++||++|+++|++|||++|+||+++++++.++|||++|+|+||+|+||||
T Consensus       111 ------~~~~~~~~~~Gv~mi~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtI~~v~q~GY~l~drvL  184 (193)
T PRK14150        111 ------ENEALKALIEGVELTLKSLLDTVAKFGVEVVGPVGEPFNPEVHQAISMQESEDHEPNTVMMVMQKGYTLNGRLL  184 (193)
T ss_pred             ------cchhHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCCCCHhHcceeeeeCCCCCCcCEEEEEeeCCeEeCCEEe
Confidence                  01235789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEEeec
Q 020069          310 RPAEVGVTQ  318 (331)
Q Consensus       310 RPA~VvVsK  318 (331)
                      |||+|+|++
T Consensus       185 RpA~V~Vsk  193 (193)
T PRK14150        185 RPAMVMVSK  193 (193)
T ss_pred             cceEEEeCC
Confidence            999999985

>PRK14146 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.8e-45  Score=338.83  Aligned_cols=153  Identities=30%  Similarity=0.437  Sum_probs=140.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCC
Q 020069          154 EREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDT  233 (331)
Q Consensus       154 e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~  233 (331)
                      .++..+..+++++++++++|+|++|||+|||||+.||++.+++||+++|+++||||+|||+||+.+...           
T Consensus        58 ~l~~~l~~l~~e~~el~d~~lR~~AdfeN~rkR~~kE~e~~~~~a~e~~~~~lLpv~DnlerAl~~~~~-----------  126 (215)
T PRK14146         58 SLQKELDNAKKEIESLKDSWARERAEFQNFKRRSAQEFVSIRKEAVKSLVSGFLNPIDNLERVGATQNQ-----------  126 (215)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc-----------
Confidence            334456678889999999999999999999999999999999999999999999999999999975421           


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCC----eee
Q 020069          234 AGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYE----RVI  309 (331)
Q Consensus       234 ~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~d----RVL  309 (331)
                         ++...+|++||+||+++|.++|+++||++|+++|++|||++|+||+++++++.++|+|+.|+|+||+|+|    |||
T Consensus       127 ---~~~~~~l~~Gv~mi~k~l~~~L~k~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~g~Vv~v~qkGY~l~~r~~~RvL  203 (215)
T PRK14146        127 ---SEELKPFVEGVKMILKEFYSVLEKSNVIRFDPKGEPFDPMSMEALSSEEGDQYSEETVIDVYQAGYYYKENEDKFTL  203 (215)
T ss_pred             ---cchhhHHHHHHHHHHHHHHHHHHHCcCeeeCCCCCCCChhHhceeeeecCCCCCcCEEEEEeeCCeEeCCccCCeec
Confidence               1234789999999999999999999999999999999999999999999999999999999999999999    699


Q ss_pred             eeeEEEeecCC
Q 020069          310 RPAEVGVTQAV  320 (331)
Q Consensus       310 RPA~VvVsK~~  320 (331)
                      |||+|+|++++
T Consensus       204 RpA~V~Vak~~  214 (215)
T PRK14146        204 RPARVRIGKPK  214 (215)
T ss_pred             cCceEEeCCCC
Confidence            99999999854

>COG0576 GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2.2e-45  Score=333.13  Aligned_cols=151  Identities=44%  Similarity=0.690  Sum_probs=139.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCc
Q 020069          157 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGA  236 (331)
Q Consensus       157 e~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~  236 (331)
                      .++..++.++++++++|+|++|||+|||||+++|++.+++||+++|+.+||||+|||+||+......       .+    
T Consensus        43 ~~i~~Le~q~~e~~~~~lr~~Ae~eN~rkR~~re~e~~~k~a~e~~~~dlLpviDnlerAl~~~~~~-------~d----  111 (193)
T COG0576          43 QEIAELEAQLEELKDKYLRAQAEFENLRKRTEREREEAKKYAIEKFAKDLLPVIDNLERALEAAEDD-------KD----  111 (193)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------cc----
Confidence            4466677888889999999999999999999999999999999999999999999999999875431       11    


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEe
Q 020069          237 VPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV  316 (331)
Q Consensus       237 ~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvV  316 (331)
                       +. ++|++||+||+++|.++|.++||++|++.|++|||++|+||++++++++++|||+.|+|+||+|||||||||+|+|
T Consensus       112 -~~-~~l~~Gvem~~~~l~~~L~k~Gv~~i~~~Ge~FDP~~HeAv~~~~~~~~~~~tVv~v~qkGY~l~dRVLRpA~V~V  189 (193)
T COG0576         112 -PE-KALLEGVEMTLDQLLDALEKLGVEEIGPEGEKFDPNLHEAVQRVESEDVEPNTVVEVLQKGYKLNDRVLRPAMVKV  189 (193)
T ss_pred             -hH-HHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhhheeeecCCCCCCCeEEEEeecCeeeCCEeccceEEEE
Confidence             22 6899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCC
Q 020069          317 TQAV  320 (331)
Q Consensus       317 sK~~  320 (331)
                      ++++
T Consensus       190 ak~~  193 (193)
T COG0576         190 AKKE  193 (193)
T ss_pred             ecCC
Confidence            9864

>PRK14144 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2.4e-45  Score=334.31  Aligned_cols=150  Identities=38%  Similarity=0.619  Sum_probs=138.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCC
Q 020069          155 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTA  234 (331)
Q Consensus       155 ~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~  234 (331)
                      +++.+..+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+...+       .   
T Consensus        50 l~~~i~~le~e~~elkdk~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~~-------~---  119 (199)
T PRK14144         50 LEEQLTLAEQKAHENWEKSVRALAELENVRRRMEREVANAHKYGVEKLISALLPVVDSLEQALQLADKN-------S---  119 (199)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHccccc-------c---
Confidence            444567788999999999999999999999999999999999999999999999999999999864321       0   


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEE
Q 020069          235 GAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEV  314 (331)
Q Consensus       235 ~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~V  314 (331)
                           ..+|++||+||+++|.++|+++||++|+++|++|||++|+||+++++++.++|||++|+|+||+|+|||||||+|
T Consensus       120 -----~~~i~~Gv~mi~k~l~~~L~k~GV~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRpA~V  194 (199)
T PRK14144        120 -----DPSMHEGLELTMKLFLDALQKFDVEQIDPLGQTFDPQQHEAMSMQPAPGAPPNSVITVFQKGYKLSDRVIRPARV  194 (199)
T ss_pred             -----hhHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhceeeeeCCCCCCcCeEEEEeeCCcEECCEEecccEE
Confidence                 146899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeecC
Q 020069          315 GVTQA  319 (331)
Q Consensus       315 vVsK~  319 (331)
                      +|+++
T Consensus       195 ~Vskk  199 (199)
T PRK14144        195 IVSTK  199 (199)
T ss_pred             EecCC
Confidence            99874

>PRK14159 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.9e-45  Score=329.68  Aligned_cols=145  Identities=34%  Similarity=0.522  Sum_probs=134.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCchh
Q 020069          159 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVP  238 (331)
Q Consensus       159 L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~~~  238 (331)
                      ++.+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.+.+              .
T Consensus        32 i~~l~~e~~elkd~~lR~~AdfeN~rkR~~rE~e~~~~~a~~~~~~~LLpV~DnlerAl~~~~~~--------------~   97 (176)
T PRK14159         32 QNKLQKDYDELKDKYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAVNVECHD--------------E   97 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc--------------c
Confidence            45567788899999999999999999999999999999999999999999999999999864321              1


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEeec
Q 020069          239 LLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ  318 (331)
Q Consensus       239 ~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvVsK  318 (331)
                      ...+|++||+||+++|.++|+++||++|++.| +|||++|+||+++++++.++|||++|+|+||+|+|||||||+|+|++
T Consensus        98 ~~~~l~~Gv~mi~k~l~~vL~k~Gv~~I~~~G-~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~dRVLRpA~V~Vak  176 (176)
T PRK14159         98 ISLKIKEGVQNTLDLFLKKLEKHGVALIKEEK-EFDPNLHEAMFHVDSENHQSGEVVQVLQKGYKIADRVIRPTKVSVAK  176 (176)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHCcCEecCCCC-CCChHHhhhhheeCCCCCCcCeEEEEeeCCcEeCCEeeecceeEeCC
Confidence            23679999999999999999999999999999 69999999999999999999999999999999999999999999985

>PRK14154 heat shock protein GrpE; Provisional

Probab=100.00  E-value=4.8e-45  Score=334.23  Aligned_cols=148  Identities=32%  Similarity=0.476  Sum_probs=136.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCc
Q 020069          157 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGA  236 (331)
Q Consensus       157 e~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~  236 (331)
                      .+|+.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...             .
T Consensus        59 ~el~~le~e~~elkd~~lRl~ADfeNyRKR~~kE~e~~~~~a~e~~~~~LLpVlDnLeRAL~~~~~-------------~  125 (208)
T PRK14154         59 GQLTRMERKVDEYKTQYLRAQAEMDNLRKRIEREKADIIKFGSKQLITDLLPVADSLIHGLESPAS-------------E  125 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc-------------c
Confidence            345567788899999999999999999999999999999999999999999999999999985421             1


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEE
Q 020069          237 VPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVG  315 (331)
Q Consensus       237 ~~~lk~l~eGVemi~kqL~~vL~k~GVe~Idp-vGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~Vv  315 (331)
                      ++.+++|++||+||+++|.++|+++||++|++ +|++|||++||||+++++++.++|||++|+|+||+|+|||||||+|+
T Consensus       126 ~~~~~~l~eGvemi~k~l~~vL~k~GVe~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVveV~qkGY~l~dRVLRPA~V~  205 (208)
T PRK14154        126 DPQVKSMRDGMSLTLDLLHNTLAKHGVQVINPNPGDPFDPALHEAMSVQAVPDAKPDTIIQVLQKGYQLNGRVLRAARVI  205 (208)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCCCChhHhheeeeeCCCCCCcCEEEEEeeCCcEeCCEEecceEEE
Confidence            13457899999999999999999999999998 69999999999999999999999999999999999999999999999


Q ss_pred             ee
Q 020069          316 VT  317 (331)
Q Consensus       316 Vs  317 (331)
                      |+
T Consensus       206 Va  207 (208)
T PRK14154        206 VA  207 (208)
T ss_pred             eC
Confidence            97

>PRK10325 heat shock protein GrpE; Provisional

Probab=100.00  E-value=5e-45  Score=331.93  Aligned_cols=139  Identities=40%  Similarity=0.619  Sum_probs=129.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCchhhHHHHHHHHH
Q 020069          169 MQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVE  248 (331)
Q Consensus       169 lkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~~~~lk~l~eGVe  248 (331)
                      ++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+....             ...+++|++||+
T Consensus        58 ~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~a~~~~~~~lLpv~DnlerAl~~~~~~-------------~~~~~~l~~Gv~  124 (197)
T PRK10325         58 ERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKA-------------NPDMSAMVEGIE  124 (197)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc-------------chhHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999864210             123578999999


Q ss_pred             HHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEeecCC
Q 020069          249 MTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAV  320 (331)
Q Consensus       249 mi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvVsK~~  320 (331)
                      ||+++|.++|+++||++|+++|++|||++|+||+++++++.++|+|+.|+|+||+|+|||||||+|+|++++
T Consensus       125 m~~~~l~~~L~~~Gv~~i~~~G~~FDP~~HEAv~~~~~~~~~~~~Vv~v~qkGY~l~drvlRpA~V~Vsk~~  196 (197)
T PRK10325        125 LTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAK  196 (197)
T ss_pred             HHHHHHHHHHHHCcCeeeCCCCCCCChhHhceeeeeCCCCCCcCeEEEEeeCCcEeCCEeccCceEEeCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999854

>PRK14149 heat shock protein GrpE; Provisional

Probab=100.00  E-value=7.4e-45  Score=329.38  Aligned_cols=146  Identities=34%  Similarity=0.497  Sum_probs=134.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCchh
Q 020069          159 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVP  238 (331)
Q Consensus       159 L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~~~  238 (331)
                      ++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...+              .
T Consensus        45 ~~~l~~e~~elkd~~lR~~AefEN~rKR~~kE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~~--------------~  110 (191)
T PRK14149         45 KEDFELKYKEMHEKYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGALKSAAEV--------------D  110 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc--------------c
Confidence            45567788899999999999999999999999999999999999999999999999999864321              1


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEeec
Q 020069          239 LLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ  318 (331)
Q Consensus       239 ~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvVsK  318 (331)
                      ...+|++||+||+++|.++|+++||++|++.| +|||++|+||+++++++.++|||+.|+|+||+|+|||||||+|+|++
T Consensus       111 ~~~~l~~Gv~mi~k~l~~vL~k~GV~~I~~~G-~FDP~~HEAv~~v~~~~~~~gtVv~V~QkGY~l~dRVLRPA~V~Vak  189 (191)
T PRK14149        111 KESALTKGLELTMEKLHEVLARHGIEGIECLE-EFDPNFHNAIMQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSIAK  189 (191)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHCCCEEeCCCC-CCChHHhheeeeecCCCCCcCEEEEEeeCCcEeCCEEeeccEEEeCC
Confidence            23679999999999999999999999999999 59999999999999999999999999999999999999999999998


Q ss_pred             C
Q 020069          319 A  319 (331)
Q Consensus       319 ~  319 (331)
                      +
T Consensus       190 ~  190 (191)
T PRK14149        190 N  190 (191)
T ss_pred             C
Confidence            3

>PRK14157 heat shock protein GrpE; Provisional

Probab=100.00  E-value=8.1e-44  Score=329.46  Aligned_cols=143  Identities=30%  Similarity=0.477  Sum_probs=133.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCC
Q 020069          156 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAG  235 (331)
Q Consensus       156 ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~  235 (331)
                      +..|..+++++++++++|+|++|||+|||||++||++++++|++++|+++||||+|||+||+.+.               
T Consensus        83 ~~~l~~le~e~~e~kd~llR~~AEfeNyRKR~~rE~e~~~~~a~~~~~~dLLpvlDnLeRAl~~~---------------  147 (227)
T PRK14157         83 LTPLGQAKKEAAEYLEALQRERAEFINYRNRTQKEQDRFRQHGIIDVLTALLPALDDIDRIREHS---------------  147 (227)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHhcc---------------
Confidence            33455677888999999999999999999999999999999999999999999999999999742               


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEE
Q 020069          236 AVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVG  315 (331)
Q Consensus       236 ~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~Vv  315 (331)
                            .+.+||+||+++|.++|+++||++|+++|++|||++||||++++++++++|||++|+|+||+|+|||||||+|+
T Consensus       148 ------~~~~~~~~i~k~l~~vL~k~GVe~I~~~Ge~FDP~~HEAV~~~~~~~~~~gtVi~V~QkGY~l~dRVLRPA~V~  221 (227)
T PRK14157        148 ------EMDDSFKAVAAKIDKAFEKFGVEKFGEKGEDFDPTKHDAILHKPDPDAEKETVDTVVEAGYRIGDRVIRAARVV  221 (227)
T ss_pred             ------ccchHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhhhceeeeecCCCCCcCEEEEEeeCCceeCCEeccCceEE
Confidence                  13468899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecC
Q 020069          316 VTQA  319 (331)
Q Consensus       316 VsK~  319 (331)
                      |+++
T Consensus       222 Vak~  225 (227)
T PRK14157        222 VASP  225 (227)
T ss_pred             eCCC
Confidence            9983

>KOG3003 consensus Molecular chaperone of the GrpE family [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2.5e-43  Score=325.46  Aligned_cols=173  Identities=55%  Similarity=0.787  Sum_probs=151.8

Q ss_pred             CCHHH-HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhh
Q 020069          143 LSRDD-LVKLLKEREELLMA--KNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSV  219 (331)
Q Consensus       143 ls~de-L~k~v~e~ee~L~~--~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~  219 (331)
                      ++.++ +...++++.++.+.  ++++..+|+|+|+|..||++|+|+|+.|..++++.||+|+|+++||.|.|+|++|.++
T Consensus        60 ~~~~~~l~~~~ae~~~l~~~~k~~~e~~eLkdk~~rs~Ad~eNlr~R~~r~~edak~FaiQ~f~kdLleVaD~Le~a~~~  139 (236)
T KOG3003|consen   60 LAPDDKLGPSLAEKALLEKVLKLEKEEQELKDKYLRSLAECENLRDRTIRDVEDAKKFAIQSFCKDLLEVADNLEKATEC  139 (236)
T ss_pred             hcchhccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            33444 55555444444433  4555699999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEee
Q 020069          220 VKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLK  299 (331)
Q Consensus       220 ~~~~~ski~~s~d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvq  299 (331)
                      +++.+.+.+       .++.++.+++|+.||+++|.++|.+||+++++|+|++||||.||||+++|+..+++|||..|.+
T Consensus       140 v~ee~~~~d-------~~~~L~~l~eGl~mte~ql~~vf~KhGLekldPigekFDPn~HEAvfq~p~~~k~pgtV~~v~k  212 (236)
T KOG3003|consen  140 VKEESEKED-------QKKDLKDLFEGLSMTEAQLKEVFAKHGLEKLDPIGEKFDPNEHEAVFQVPDAAKEPGTVALVTK  212 (236)
T ss_pred             cchhhcccc-------cchHHHHHHhHHHHHHHHHHHHHHHcCceecCCCCCCCCcchhheeEeccccCCCCCeEEEEec
Confidence            987533222       3467899999999999999999999999999999999999999999999998899999999999


Q ss_pred             cceeeCCeeeeeeEEEeecCCCC
Q 020069          300 SGYTLYERVIRPAEVGVTQAVEN  322 (331)
Q Consensus       300 kGY~L~dRVLRPA~VvVsK~~~~  322 (331)
                      .||+||||+||||+|+|++++++
T Consensus       213 ~Gy~L~~R~IRPA~VgV~~~~~~  235 (236)
T KOG3003|consen  213 KGYKLNGRVIRPAMVGVVKGGEN  235 (236)
T ss_pred             cCcccCCeeechhheeeecCCCC
Confidence            99999999999999999998865

>PRK14156 heat shock protein GrpE; Provisional

Probab=100.00  E-value=8e-43  Score=312.95  Aligned_cols=154  Identities=34%  Similarity=0.502  Sum_probs=136.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhc
Q 020069          145 RDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF  224 (331)
Q Consensus       145 ~deL~k~v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~  224 (331)
                      .++.+..++. ..+|+.+++++++++++|+|++|||+|||||+++|++++++||.++|+++||||+|||+||+.+...  
T Consensus        23 ~~~~~~~~~~-~~~l~~l~~e~~elkd~~lR~~AEfeN~rKR~~rE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~--   99 (177)
T PRK14156         23 VEEVVEETPE-KSELELANERADEFENKYLRAHAEMQNIQRRANEERQQLQRYRSQDLAKAILPSLDNLERALAVEGL--   99 (177)
T ss_pred             HHHHHhhccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhCccc--
Confidence            3344443333 4456778899999999999999999999999999999999999999999999999999999975321  


Q ss_pred             ccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCC-CCCCCceeEEeeccee
Q 020069          225 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDN-SKPPGTVAHVLKSGYT  303 (331)
Q Consensus       225 ski~~s~d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~-d~~~gTVveVvqkGY~  303 (331)
                                     ..+|.+||+||+++|.++|+++||++|++.  +|||++|+||++++++ ++++|||++|+|+||+
T Consensus       100 ---------------~~~l~~Gv~mi~k~l~~~L~~~GV~~i~~~--~FDP~~HEAv~~~~~~~~~~~gtVv~V~qkGY~  162 (177)
T PRK14156        100 ---------------TDDVKKGLEMVQESLIQALKEEGVEEVAVD--SFDHNLHMAVQTLPADDEHPADSIAQVFQKGYK  162 (177)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHCCCeecCCC--CCChhHhhcceeecCCCCCCcCEEEEEeeCCcE
Confidence                           136899999999999999999999999985  9999999999999864 5899999999999999


Q ss_pred             eCCeeeeeeEEEeec
Q 020069          304 LYERVIRPAEVGVTQ  318 (331)
Q Consensus       304 L~dRVLRPA~VvVsK  318 (331)
                      |||||||||+|+|++
T Consensus       163 l~dRVLRpA~V~Va~  177 (177)
T PRK14156        163 LHERLLRPAMVVVYN  177 (177)
T ss_pred             eCCEEeecceeEeCC
Confidence            999999999999984

>PRK14142 heat shock protein GrpE; Provisional

Probab=100.00  E-value=4.2e-42  Score=317.02  Aligned_cols=142  Identities=25%  Similarity=0.392  Sum_probs=128.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCchhhHHH
Q 020069          163 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKS  242 (331)
Q Consensus       163 ~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~~~~lk~  242 (331)
                      .+++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...         +          
T Consensus        46 ~~e~~elkdk~lR~~AEfEN~RKR~erE~e~~~~~A~e~~~kdLLpVlDnLERAL~~~~~---------~----------  106 (223)
T PRK14142         46 EDKVAELTADLQRVQADFANYRKRALRDQQAAADRAKASVVSQLLGVLDDLERARKHGDL---------E----------  106 (223)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHhHHHHHHhcccc---------c----------
Confidence            456778899999999999999999999999999999999999999999999999975321         0          


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCC-CCceeEEeecceeeCCeeeeeeEEEeecCCC
Q 020069          243 LLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKP-PGTVAHVLKSGYTLYERVIRPAEVGVTQAVE  321 (331)
Q Consensus       243 l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~-~gTVveVvqkGY~L~dRVLRPA~VvVsK~~~  321 (331)
                       ..+++||+++|.++|+++||++|+++|++|||++||||+++++++.+ .|+|++|+|+||+|+|||||||+|+|++.+-
T Consensus       107 -~~~v~~I~kqL~~iLek~GVe~I~~~Ge~FDP~~HEAv~~ve~~e~~~~~tVveV~QkGYkL~dRVLRPA~V~Vsk~~~  185 (223)
T PRK14142        107 -SGPLKSVADKLDSALTGLGLVAFGAEGEDFDPVLHEAVQHEGDGGQGSKPVIGTVMRQGYQLGEQVLRHALVGVVDTVV  185 (223)
T ss_pred             -cHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhhhceeeeecCCCCCCCCEEEEEecCCcEeCCEeccCceEEECCCCC
Confidence             13578999999999999999999999999999999999999988764 6799999999999999999999999999775


Q ss_pred             Ccc
Q 020069          322 NDR  324 (331)
Q Consensus       322 ~~~  324 (331)
                      ...
T Consensus       186 ~~~  188 (223)
T PRK14142        186 VDA  188 (223)
T ss_pred             CCc
Confidence            444

>PRK14164 heat shock protein GrpE; Provisional

Probab=100.00  E-value=3.9e-41  Score=310.46  Aligned_cols=139  Identities=28%  Similarity=0.385  Sum_probs=127.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCch
Q 020069          158 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV  237 (331)
Q Consensus       158 ~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~~  237 (331)
                      .+..+++++++++++|+|++|||+|||||++||++++++|++++|+++||||+|||+||+.+..                
T Consensus        78 ~~~~le~el~el~d~llR~~AE~eN~RkR~~rE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~----------------  141 (218)
T PRK14164         78 EASTVEAQLAERTEDLQRVTAEYANYRRRTERERQAIIETAKAGVATDLLPILDDLDLAEQHGD----------------  141 (218)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccc----------------
Confidence            4566788899999999999999999999999999999999999999999999999999997421                


Q ss_pred             hhHHHHHHH-HHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEe
Q 020069          238 PLLKSLLEG-VEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV  316 (331)
Q Consensus       238 ~~lk~l~eG-Vemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvV  316 (331)
                           +.+| ++||+++|.++|+++||++|+++|++|||++||||+++++++  .++|+.|+|+||+|||||||||+|+|
T Consensus       142 -----~~~g~l~~i~~~l~~vL~k~Gve~I~~~Ge~FDP~~HEAV~~~~~~~--~~~V~~V~qkGY~l~dRVLRPA~V~V  214 (218)
T PRK14164        142 -----LNEGPLKAFSDKLTNVLAGLKVEKFGEEGDAFDPEIHEAVQDLSSGD--EKVLGTVLRKGYRMGDRVLRTAMVII  214 (218)
T ss_pred             -----ccccHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhheeeeecCCC--CCEeeEEeeCCcEECCEeccCceEEe
Confidence                 1233 789999999999999999999999999999999999998764  58999999999999999999999999


Q ss_pred             ecC
Q 020069          317 TQA  319 (331)
Q Consensus       317 sK~  319 (331)
                      ++.
T Consensus       215 ak~  217 (218)
T PRK14164        215 ADP  217 (218)
T ss_pred             CCC
Confidence            973

>cd00446 GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases

Probab=100.00  E-value=6.9e-40  Score=280.89  Aligned_cols=136  Identities=53%  Similarity=0.806  Sum_probs=128.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCCCCCchhhHHHHHHH
Q 020069          167 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEG  246 (331)
Q Consensus       167 ~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d~~~~~~~lk~l~eG  246 (331)
                      ++++++|+|++|||+|||||+.+++++++++|+++|+++||||+|+|++|+.+...+              +.++.+.+|
T Consensus         2 ~~~~~~~~r~~ae~~N~rkr~~~e~~~~~~~~~~~~~~~ll~v~D~le~a~~~~~~~--------------~~~~~~~~g   67 (137)
T cd00446           2 EELKDKLLRALAEFENYRKRTEREREEARKYAIEKFAKDLLPVLDNLERALEAAKKE--------------EELKNLVEG   67 (137)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--------------chHHHHHHH
Confidence            467899999999999999999999999999999999999999999999999865320              245789999


Q ss_pred             HHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEe
Q 020069          247 VEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV  316 (331)
Q Consensus       247 Vemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvV  316 (331)
                      |+||+++|.++|.++||++|++.|++|||++|+||+++++++.++|||++|+++||+++|||||||+|+|
T Consensus        68 ~~~i~~~l~~~L~~~Gv~~i~~~g~~FDp~~Heav~~~~~~~~~~~~I~~v~~~GY~~~~rvlRpA~V~V  137 (137)
T cd00446          68 VEMTLKQLLDVLEKHGVEKIEPEGEPFDPNLHEAVMQVPSPDVEPGTVVEVLQKGYKLGDRVLRPAMVVV  137 (137)
T ss_pred             HHHHHHHHHHHHHHCCCEEECCCCCCCCHHHheeeeeecCCCCCcCEEEEEeecCeEECCEEecccEeEC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999997

The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent.

>PF01025 GrpE: GrpE; InterPro: IPR000740 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=100.00  E-value=6.2e-40  Score=286.13  Aligned_cols=152  Identities=45%  Similarity=0.699  Sum_probs=131.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCCC
Q 020069          153 KEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSND  232 (331)
Q Consensus       153 ~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~d  232 (331)
                      ..+++.++.++++++++++++.|+.|+|+||++|+.++.++++.++.++|+++|||++|+|++|+.+...          
T Consensus        14 ~~~~~~l~~l~~~~~~l~~~~~r~~ae~en~~~r~~~e~~~~~~~~~~~~~~~ll~v~D~l~~a~~~~~~----------   83 (165)
T PF01025_consen   14 EELEEELEELEKEIEELKERLLRLQAEFENYRKRLEKEKEEAKKYALEKFLKDLLPVLDNLERALEAAKS----------   83 (165)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC-SH----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----------
Confidence            3334445667788899999999999999999999999999999999999999999999999999987531          


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeee
Q 020069          233 TAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPA  312 (331)
Q Consensus       233 ~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA  312 (331)
                          .+....|.+||.|++++|.++|.++||++|+|+|++|||++|+||+++++++.++|||++|+++||+++|||||||
T Consensus        84 ----~~~~~~~~~g~~~~~~~l~~~L~~~Gv~~i~~~G~~FDp~~heav~~~~~~~~~~~~I~~v~~~GY~~~~rvlRpA  159 (165)
T PF01025_consen   84 ----NEEEESLLEGLEMILKQLEDILEKNGVEEIEPVGEPFDPNLHEAVETVPDPDKEPGTIVEVVRPGYRLGGRVLRPA  159 (165)
T ss_dssp             ----HCTCHHHHHHHHHHHHHHHHHHHTTTEEEE--TSSB--TTTEEEEEEECSSSS-CTBEEEECC-EEEETTEEEE-E
T ss_pred             ----cchHHHHHHHHHHHHHHHHHHHHHCCCEecCCCCCCCCHHHheeheecCcCCCCcCeEEEEEecCEEECCEEeeee
Confidence                1123589999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeec
Q 020069          313 EVGVTQ  318 (331)
Q Consensus       313 ~VvVsK  318 (331)
                      +|+|+|
T Consensus       160 ~V~V~K  165 (165)
T PF01025_consen  160 EVVVSK  165 (165)
T ss_dssp             EEEEEE
T ss_pred             EEEecC
Confidence            999986

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes the grpE protein. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. The X-ray crystal structure of GrpE in complex with the ATPase domain of DnaK revealed that GrpE is an asymmetric homodimer, bent in a manner that favours extensive contacts with only one DnaKATPase monomer []. GrpE does not actively compete for the atomic positions occupied by the nucleotide. GrpE and ADP mutually reduce one another's affinity for DnaK 200-fold, and ATP instantly dissociates GrpE from DnaK.; GO: 0000774 adenyl-nucleotide exchange factor activity, 0042803 protein homodimerization activity, 0051087 chaperone binding, 0006457 protein folding; PDB: 3A6M_A 4ANI_A 1DKG_B.

>PF06156 DUF972: Protein of unknown function (DUF972); InterPro: IPR010377 FUNCTION: Involved in initiation control of chromosome replication

Probab=84.29  E-value=3.3  Score=34.94  Aligned_cols=70  Identities=20%  Similarity=0.186  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhh
Q 020069          148 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRAS  217 (331)
Q Consensus       148 L~k~v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl  217 (331)
                      +...+..+-.++..++.++.++-+.-.+++-|-+++|+|+.+............-...+-+-.|||.+..
T Consensus        13 le~~l~~l~~~~~~LK~~~~~l~EEN~~L~~EN~~Lr~~l~~~~~~~~~~~~~~~~~~~~~g~~NL~~LY   82 (107)
T PF06156_consen   13 LEQQLGQLLEELEELKKQLQELLEENARLRIENEHLRERLEELEQEEEEKEEKKTKKKLGEGRDNLARLY   82 (107)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccchHHHHHHHH
Confidence            3344444444455555666666666677777888889888776551111112222233555566666554

SUBUNIT: Interacts with both DnaA and DnaN, acting as a bridge between these two proteins. SIMILARITY: Belongs to the YabA family.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	331
4ani_A	213	Structural Basis For The Intermolecular Communicati		4e-23
1dkg_A	197	Crystal Structure Of The Nucleotide Exchange Factor		4e-20
3a6m_A	177	Crystal Structure Of Grpe From Thermus Thermophilus		3e-11

>pdb|4ANI|A Chain A, Structural Basis For The Intermolecular Communication Between Dnak And Grpe In The Dnak Chaperone System From Geobacillus Kaustophilus Hta426 Length = 213

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 14/153 (9%)
Query: 166 MKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFL 225
           + +M+ + LR +A+ EN + RT +E E ++K+  Q+ A  LL V DN  RA        L
Sbjct: 75  LSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERA--------L 126
Query: 226 KIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLP 285
           KI+  N+ A      KS+L+G+EM  + L +  KK GVE  + + +PFDP+ H A+ Q  
Sbjct: 127 KIETDNEQA------KSILQGMEMVYRSLVDALKKEGVEAIEAVGKPFDPYLHQAVMQAE 180
Query: 286 DNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
                P TV   L+ GY L +RV+RPA V V+Q
Sbjct: 181 AEGYEPNTVVEELQKGYKLKDRVLRPAMVKVSQ 213

>pdb|1DKG|A Chain A, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 197

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 13/150 (8%)
Query: 170 QDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP 229
           +D +LR  AEMEN++ RT  + E + KFA++ F   LL V D+L RA  V        D 
Sbjct: 59  RDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVA-------DK 111
Query: 230 SNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSK 289
           +N      P + +++E +E+T K + +V +KFGVE     N P DP+ H A+  +  +  
Sbjct: 112 AN------PDMSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDV 165
Query: 290 PPGTVAHVLKSGYTLYERVIRPAEVGVTQA 319
            PG V  +++ GYTL  R IR A V V +A
Sbjct: 166 APGNVLGIMQKGYTLNGRTIRAAMVTVAKA 195

>pdb|3A6M|A Chain A, Crystal Structure Of Grpe From Thermus Thermophilus Hb8 Length = 177

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 19/156 (12%)
Query: 163 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 222
            EE+K ++DK LR  A+ +N + R   E +  ++  +    +ALL V D+L RA      
Sbjct: 32  EEELKGLKDKYLRLLADFDNYRKRMEEELKAREREGVLKALRALLPVLDDLDRAL----- 86
Query: 223 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 282
            F +  P           +S+ +GV         +    GVE+     E FDP  H A+ 
Sbjct: 87  EFAEASP-----------ESIRQGVRAIRDGFFRILAGLGVEEVPGEGEAFDPRYHEAVG 135
Query: 283 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
            LP     PG VA V + G+ + E ++RPA V V +
Sbjct: 136 LLPGE---PGKVAKVFQRGFRMGEALVRPARVAVGE 168
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	331
1dkg_A	197	Nucleotide exchange factor GRPE; HSP70, GRPE, nucl	5e-58
4ani_A	213	Protein GRPE; chaperone cycle, complementary assay	4e-54
3a6m_A	177	Protein GRPE, HSP-70 cofactor; coiled-coil, four-h	1e-50
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	6e-04

>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1 Length = 197

 Score =  184 bits (470), Expect = 5e-58
 Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 13/204 (6%)

Query: 116 DAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLR 175
           + K  +          + +     E E S + +    ++   L     E   + +D +LR
Sbjct: 5   EQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKVANLEAQLAEAQTRERDGILR 64

Query: 176 SFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAG 235
             AEMEN++ RT  + E + KFA++ F   LL V D+L RA        L++    +   
Sbjct: 65  VKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRA--------LEVADKANPD- 115

Query: 236 AVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVA 295
               + +++E +E+T K + +V +KFGVE     N P DP+ H A+  +  +   PG V 
Sbjct: 116 ----MSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVL 171

Query: 296 HVLKSGYTLYERVIRPAEVGVTQA 319
            +++ GYTL  R IR A V V +A
Sbjct: 172 GIMQKGYTLNGRTIRAAMVTVAKA 195

>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus} Length = 213

 Score =  175 bits (446), Expect = 4e-54
 Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 14/225 (6%)

Query: 94  KPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESDSDSESEIELSRDDLVKLLK 153
           +  +   +    +  E  +P  +  A     E+     E     E+     +    + L 
Sbjct: 3   QGEKQVMEQATYDEPEREQPIEEEAAPQPEEESGGVPLEEAGGEEAAEPAEKAPTAEELA 62

Query: 154 EREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNL 213
             +  +     ++ +M+ + LR +A+ EN + RT +E E ++K+  Q+ A  LL V DN 
Sbjct: 63  AAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNF 122

Query: 214 GRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPF 273
            RA  +  +N                 KS+L+G+EM  + L +  KK GVE  + + +PF
Sbjct: 123 ERALKIETDN--------------EQAKSILQGMEMVYRSLVDALKKEGVEAIEAVGKPF 168

Query: 274 DPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 318
           DP+ H A+ Q       P TV   L+ GY L +RV+RPA V V+Q
Sbjct: 169 DPYLHQAVMQAEAEGYEPNTVVEELQKGYKLKDRVLRPAMVKVSQ 213

>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus} Length = 177

 Score =  165 bits (419), Expect = 1e-50
 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 19/186 (10%)

Query: 134 DSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAEN 193
           + + E+ +E   + + +  +  EE L A  EE+K ++DK LR  A+ +N + R   E + 
Sbjct: 3   ERNHENTLEKDLEAVGQEAQALEERLKAAEEELKGLKDKYLRLLADFDNYRKRMEEELKA 62

Query: 194 SKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQ 253
            ++  +    +ALL V D+L RA    + +                 +S+ +GV      
Sbjct: 63  REREGVLKALRALLPVLDDLDRALEFAEAS----------------PESIRQGVRAIRDG 106

Query: 254 LGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAE 313
              +    GVE+     E FDP  H A+  LP     PG VA V + G+ + E ++RPA 
Sbjct: 107 FFRILAGLGVEEVPGEGEAFDPRYHEAVGLLPG---EPGKVAKVFQRGFRMGEALVRPAR 163

Query: 314 VGVTQA 319
           V V + 
Sbjct: 164 VAVGEE 169

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 39.4 bits (91), Expect = 6e-04
 Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 9/83 (10%)

Query: 130 TKESDSDSESE-IELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAE-----MENV 183
            +      E E I   R++  K L+E +       +E ++   K L  + +     +E  
Sbjct: 75  AQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKN 134

Query: 184 KDRTIREAENSKKFAIQNFAKAL 206
           K    R A+  K F  Q  A  +
Sbjct: 135 KINN-RIAD--KAFYQQPDADII 154

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	331
4ani_A	213	Protein GRPE; chaperone cycle, complementary assay	100.0
1dkg_A	197	Nucleotide exchange factor GRPE; HSP70, GRPE, nucl	100.0
3a6m_A	177	Protein GRPE, HSP-70 cofactor; coiled-coil, four-h	100.0
3swy_A	46	Cyclic nucleotide-gated cation channel alpha-3; co	86.11
3swf_A	74	CGMP-gated cation channel alpha-1; coiled-coil, as	82.46

>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}

Probab=100.00  E-value=1.4e-46  Score=344.38  Aligned_cols=153  Identities=36%  Similarity=0.573  Sum_probs=142.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCCC
Q 020069          152 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN  231 (331)
Q Consensus       152 v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s~  231 (331)
                      +..++.+|+.+++++++++++|+|++|||+|||||++||++.+++||+++|+++||||+|||+||+.+.+.         
T Consensus        61 ~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~---------  131 (213)
T 4ani_A           61 LAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERALKIETD---------  131 (213)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCCSC---------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc---------
Confidence            44556667888999999999999999999999999999999999999999999999999999999986432         


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeee
Q 020069          232 DTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRP  311 (331)
Q Consensus       232 d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRP  311 (331)
                           +..+++|++||+||+++|.++|.++||++|+++|++|||++|+||+++++++.++|||+.|+|+||+|+||||||
T Consensus       132 -----~~~~~~l~eGvemi~k~l~~~L~k~Gv~~I~~~Ge~FDP~~HeAv~~v~~~~~~~gtVv~V~qkGY~l~dRVLRp  206 (213)
T 4ani_A          132 -----NEQAKSILQGMEMVYRSLVDALKKEGVEAIEAVGKPFDPYLHQAVMQAEAEGYEPNTVVEELQKGYKLKDRVLRP  206 (213)
T ss_dssp             -----CSTHHHHHHHHHHHHHHHHHHHHHTTEECCCCSSSCCCTTTEEEEEEECCSSSCSSSEEEEEECCCEETTSCCSC
T ss_pred             -----cccHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHceeeeeecCCCCCCCcEEEEEeCCeEECCEEeec
Confidence                 123578999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEeec
Q 020069          312 AEVGVTQ  318 (331)
Q Consensus       312 A~VvVsK  318 (331)
                      |+|+|++
T Consensus       207 A~V~Va~  213 (213)
T 4ani_A          207 AMVKVSQ  213 (213)
T ss_dssp             EEEEEEC
T ss_pred             eEEEeCC
Confidence            9999985

>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1

Probab=100.00  E-value=3.3e-46  Score=338.16  Aligned_cols=155  Identities=36%  Similarity=0.555  Sum_probs=136.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCC
Q 020069          150 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP  229 (331)
Q Consensus       150 k~v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~  229 (331)
                      ..+++++++++++++   +++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+....      
T Consensus        42 ~~~~~l~~~l~e~~~---~~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~------  112 (197)
T 1dkg_A           42 EKVANLEAQLAEAQT---RERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKA------  112 (197)
T ss_dssp             HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGHHHHSHHHHHHHHHHHHCC---------
T ss_pred             HHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccc------
Confidence            445555555544433   47789999999999999999999999999999999999999999999999864210      


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeee
Q 020069          230 SNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVI  309 (331)
Q Consensus       230 s~d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVL  309 (331)
                             ++.+++|++||+||+++|.++|+++||++|+++|++|||++|+||+++++++.++|||+.|+|+||+|+||||
T Consensus       113 -------~~~~~~l~~Gv~~~~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~~tVv~v~qkGY~l~dRvL  185 (197)
T 1dkg_A          113 -------NPDMSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTI  185 (197)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHTTTTEEEECCCSSBCCTTSEEEEEEEECSSSCTTBEEEEEECEEEETTEEE
T ss_pred             -------cchHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhheeeeecCCCCCcCeEEEEeeCCeeeCCEEe
Confidence                   1235789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEEeecCC
Q 020069          310 RPAEVGVTQAV  320 (331)
Q Consensus       310 RPA~VvVsK~~  320 (331)
                      |||+|+|++++
T Consensus       186 RpA~V~V~~~~  196 (197)
T 1dkg_A          186 RAAMVTVAKAK  196 (197)
T ss_dssp             ECEEEEEEECC
T ss_pred             cceEEEecCCC
Confidence            99999999854

>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}

Probab=100.00  E-value=1e-46  Score=336.76  Aligned_cols=151  Identities=32%  Similarity=0.480  Sum_probs=137.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhhhhhcccCCCC
Q 020069          151 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPS  230 (331)
Q Consensus       151 ~v~e~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~A~e~f~kdLLpVlDnLERAl~~~~~~~ski~~s  230 (331)
                      .+..+++.++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...        
T Consensus        20 e~~~l~~~~~~l~~e~~e~~d~~lR~~Ae~eN~rkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~--------   91 (177)
T 3a6m_A           20 EAQALEERLKAAEEELKGLKDKYLRLLADFDNYRKRMEEELKAREREGVLKALRALLPVLDDLDRALEFAEA--------   91 (177)
T ss_dssp             HHSSTTTSTTGGGGTSSSHHHHHHTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGG--------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhc--------
Confidence            333344456667788899999999999999999999999999999999999999999999999999986432        


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeee
Q 020069          231 NDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIR  310 (331)
Q Consensus       231 ~d~~~~~~~lk~l~eGVemi~kqL~~vL~k~GVe~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLR  310 (331)
                              ..++|++||+||+++|.++|+++||++|+++|++|||++|+||+++++   ++|||++|+|+||+|+|||||
T Consensus        92 --------~~~~l~~Gv~m~~~~l~~~L~k~Gv~~i~~~Ge~FDP~~HeAv~~~~~---~~gtVv~v~qkGY~l~dRvLR  160 (177)
T 3a6m_A           92 --------SPESIRQGVRAIRDGFFRILAGLGVEEVPGEGEAFDPRYHEAVGLLPG---EPGKVAKVFQRGFRMGEALVR  160 (177)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHTTCEECCCTTSBCCTTTEEEEEEEES---STTBEEEEEECCEEETTEEEE
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhhhhhcccC---CcCeEEEEeecCeeeCCEEec
Confidence                    146899999999999999999999999999999999999999999987   899999999999999999999


Q ss_pred             eeEEEeecCC
Q 020069          311 PAEVGVTQAV  320 (331)
Q Consensus       311 PA~VvVsK~~  320 (331)
                      ||+|+|++++
T Consensus       161 pA~V~V~~~~  170 (177)
T 3a6m_A          161 PARVAVGEEK  170 (177)
T ss_dssp             CEEEEEEECC
T ss_pred             CeEEEEeCCC
Confidence            9999999966

>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}

Probab=86.11  E-value=4.2  Score=28.69  Aligned_cols=41  Identities=15%  Similarity=0.179  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020069          155 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSK  195 (331)
Q Consensus       155 ~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak  195 (331)
                      +|+.+..++.-++-|+.++.|+.|||+....++.+-+....
T Consensus         3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE   43 (46)
T 3swy_A            3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLE   43 (46)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45667777788899999999999999999988887666543

>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}

Probab=82.46  E-value=10  Score=29.30  Aligned_cols=43  Identities=21%  Similarity=0.322  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020069          155 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKF  197 (331)
Q Consensus       155 ~ee~L~~~~~El~elkdk~lR~~AEfEN~RKR~~rE~e~ak~~  197 (331)
                      +++.+..++.-++-|+-++.|++|+|+....++.+-+..+..+
T Consensus         5 lEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~   47 (74)
T 3swf_A            5 LEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKF   47 (74)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4556666777888999999999999999999998877766554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	331
d1dkga1	59	b.73.1.1 (A:139-197) Head domain of nucleotide exc	2e-21

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]} Length = 59

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

 Score = 83.9 bits (208), Expect = 2e-21
 Identities = 22/57 (38%), Positives = 30/57 (52%)

Query: 263 VEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 319
           VE     N P DP+ H A+  +  +   PG V  +++ GYTL  R IR A V V +A
Sbjct: 1   VEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKA 57

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	331
d1dkga1	59	Head domain of nucleotide exchange factor GrpE {Es	99.87

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=3.9e-23  Score=153.03  Aligned_cols=58  Identities=38%  Similarity=0.596  Sum_probs=56.1

Q ss_pred             CeeeCCCCCCCCcccCeeeeeccCCCCCCCceeEEeecceeeCCeeeeeeEEEeecCC
Q 020069          263 VEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAV  320 (331)
Q Consensus       263 Ve~IdpvGepFDPn~HEAV~~v~s~d~~~gTVveVvqkGY~L~dRVLRPA~VvVsK~~  320 (331)
                      |+.|+++|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|+|++
T Consensus         1 ve~i~~~g~~FDP~~HeAv~~~~~~~~~~~~I~~v~~~GY~~~~rvlRpA~V~V~k~~   58 (59)
T d1dkga1           1 VEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAK   58 (59)
T ss_dssp             EEEECCCSSBCCTTSEEEEEEEECSSSCTTBEEEEEECEEEETTEEEECEEEEEEECC
T ss_pred             CceeCCCCCCCCHHHceEeeEecCCCCCCCEEEEEEeCCcEECCEEeeccEEEEecCC
Confidence            5789999999999999999999999999999999999999999999999999999976