Citrus Sinensis ID: 020084

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
MATTKRLRFHLSPSFFFLLLPLLLQFYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYVNI
cccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccEEccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccccccHHHHHHHHHHccccccccEEEccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccHHcHHHHHHHHHHccccccccHHHccccccHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccc
ccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccEHcccccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccEcccEcccccHHHHHHHcccccccHHHHHHHHHccccccHHHHHHHHHHHHccEEEHHHcHHHHHccccccccHHHHHHHHHHcccccccccccEEcccccccccccccHHHHHHHccccccHHHHHHHHcccccHHHHHHHHcHHHHHHHHHHHHHHHcccccEEHHHcEcccccccccc
mattkrlrfhlspsfFFLLLPLLLQFYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHdcavkscdaslLLETVTGVASEQASERSFGMRNFKYVSTIKAALEaecplkvsCADIVALSAREGIvmlggpripiktgrrdsRVSYLAEVEKFIPNHNDSIATALSVFNsigiddegVVALYAGAHSVGRVHCVNLVhrlyptvdptldpvyaeylkgrcptpdpdpdavvyarndretpmildnnyykniinhkgllivdqqlasdprttpfvqkmaannsYFHEQFSRAIALLsennpltgdqgevrkdcryvni
mattkrlrfhlspSFFFLLLPLLLQFYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVAseqasersfgmRNFKYVSTIKAALEAECPLKVSCADIVALSAREGivmlggpripiktgrrdSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKgrcptpdpdpdAVVYARNDRETPMILDNNYYKNIINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSennpltgdqgevrkdcryvni
MATTKrlrfhlspsffflllplllQFYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYVNI
******LRFHLSPSFFFLLLPLLLQFYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQA*ERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPT*****DAVVYARNDRETPMILDNNYYKNIINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALL**********************
*************SFFFLLLPLLLQFYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVT**********SFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCP******DAVVYARNDRETPMILDNNYYKNIINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYVNI
MATTKRLRFHLSPSFFFLLLPLLLQFYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTG********RSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYVNI
*****RLRFHLSPSFFFLLLPLLLQFYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQA*E*SFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYVN*
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATTKRLRFHLSPSFFFLLLPLLLQFYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYVNI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query331 2.2.26 [Sep-21-2011]
Q42580327 Peroxidase 21 OS=Arabidop yes no 0.918 0.929 0.761 1e-140
Q9SB81330 Peroxidase 42 OS=Arabidop no no 0.897 0.9 0.583 1e-105
Q9SS67321 Peroxidase 28 OS=Arabidop no no 0.930 0.959 0.374 6e-56
Q43729313 Peroxidase 57 OS=Arabidop no no 0.912 0.964 0.378 6e-55
O23237331 Peroxidase 49 OS=Arabidop no no 0.930 0.930 0.391 2e-54
Q9LNL0310 Peroxidase 8 OS=Arabidops no no 0.918 0.980 0.356 8e-53
Q96509330 Peroxidase 55 OS=Arabidop no no 0.939 0.942 0.369 1e-52
Q9SI16338 Peroxidase 15 OS=Arabidop no no 0.876 0.857 0.388 2e-52
Q9FJZ9336 Peroxidase 72 OS=Arabidop no no 0.876 0.863 0.388 2e-52
Q9SD46344 Peroxidase 36 OS=Arabidop no no 0.930 0.895 0.376 1e-51
>sp|Q42580|PER21_ARATH Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1 Back     alignment and function desciption
 Score =  498 bits (1282), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 233/306 (76%), Positives = 262/306 (85%), Gaps = 2/306 (0%)

Query: 26  FYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLL 85
           F+ G  EL+ NYY +SCPKAEEII+QQV  LYYKHGNTAVSW+RNLFHDC VKSCDASLL
Sbjct: 23  FHIGNGELEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLL 82

Query: 86  LETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGP 145
           LET  GV SEQ S+RSFGMRNFKYV  IK ALE ECP  VSCADIVALSAR+GIVML GP
Sbjct: 83  LETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGP 142

Query: 146 RIP-IKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGR 204
           +I  IKTGRRDSR SYL +VE  IPNHNDS+++ +S FNSIGID E  VAL  GAHSVGR
Sbjct: 143 KIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALL-GAHSVGR 201

Query: 205 VHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKN 264
           VHCVNLVHRLYPT+DPTLDP YA YLK RCP+P PDP+AV+Y+RNDRETPM++DN YYKN
Sbjct: 202 VHCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKN 261

Query: 265 IINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRK 324
           I+ HKGLL++D +LA+DPRT PFV KMAA+N+YFHEQFSR + LLSE NPLTGDQGE+RK
Sbjct: 262 IMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRK 321

Query: 325 DCRYVN 330
           DCRYVN
Sbjct: 322 DCRYVN 327
Might function as heat shock-like defense protein. May be implicated in the systemic acquired resistance response.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q9SB81|PER42_ARATH Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2 Back     alignment and function description
>sp|Q9SS67|PER28_ARATH Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1 Back     alignment and function description
>sp|Q43729|PER57_ARATH Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1 Back     alignment and function description
>sp|O23237|PER49_ARATH Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2 Back     alignment and function description
>sp|Q9LNL0|PER8_ARATH Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1 Back     alignment and function description
>sp|Q96509|PER55_ARATH Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1 Back     alignment and function description
>sp|Q9SI16|PER15_ARATH Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJZ9|PER72_ARATH Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1 Back     alignment and function description
>sp|Q9SD46|PER36_ARATH Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query331
225626263331 peroxidase [Populus trichocarpa] 0.921 0.921 0.807 1e-149
224069376331 predicted protein [Populus trichocarpa] 0.921 0.921 0.803 1e-148
312283385328 unnamed protein product [Thellungiella h 0.918 0.926 0.771 1e-140
297827217327 peroxidase 21 [Arabidopsis lyrata subsp. 0.954 0.966 0.745 1e-139
357440429325 Peroxidase [Medicago truncatula] gi|3554 0.909 0.926 0.768 1e-139
15228090327 peroxidase [Arabidopsis thaliana] gi|254 0.918 0.929 0.761 1e-138
1402912327 peroxidase [Arabidopsis thaliana] 0.918 0.929 0.761 1e-138
21593054327 putative peroxidase ATP2a [Arabidopsis t 0.918 0.929 0.758 1e-138
388502634325 unknown [Medicago truncatula] 0.909 0.926 0.748 1e-137
356537521327 PREDICTED: peroxidase 21-like [Glycine m 0.921 0.932 0.741 1e-136
>gi|225626263|gb|ACN97181.1| peroxidase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 247/306 (80%), Positives = 277/306 (90%), Gaps = 1/306 (0%)

Query: 25  QFYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASL 84
           QFYSG SELQFNYYAQSCP+AEEIIK+QV++LY KHGNTAVSWVRNLFHDC VKSCDASL
Sbjct: 25  QFYSGKSELQFNYYAQSCPRAEEIIKEQVIKLYNKHGNTAVSWVRNLFHDCIVKSCDASL 84

Query: 85  LLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGG 144
           LLETV G+ SE+AS+RS GMRNFKYV+TIKAALE+ECP+ VSCADIVALSAR+GIVMLGG
Sbjct: 85  LLETVNGIESEKASQRSLGMRNFKYVNTIKAALESECPVTVSCADIVALSARDGIVMLGG 144

Query: 145 PRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGR 204
           PR+ +KTGRRDS  SY A VE FIPNHNDSI+  LS F SIG+D EG VAL  G+HSVGR
Sbjct: 145 PRVEMKTGRRDSTESYGAVVEDFIPNHNDSISLVLSRFQSIGVDVEGTVALL-GSHSVGR 203

Query: 205 VHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKN 264
           VHCVNLVHR+YPTVDPT+DP YAEYLKGRCPTPDPDP AV+YARNDRETPMILDN YYKN
Sbjct: 204 VHCVNLVHRIYPTVDPTMDPDYAEYLKGRCPTPDPDPQAVLYARNDRETPMILDNYYYKN 263

Query: 265 IINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRK 324
           ++ HKGLL+VDQQL SDP T+P+V+KMAA+N YFH+QFSRA+ LLSENNPLTG+QGE+RK
Sbjct: 264 LLGHKGLLMVDQQLTSDPLTSPYVEKMAADNGYFHDQFSRAVVLLSENNPLTGNQGEIRK 323

Query: 325 DCRYVN 330
           DCRYVN
Sbjct: 324 DCRYVN 329

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224069376|ref|XP_002326343.1| predicted protein [Populus trichocarpa] gi|222833536|gb|EEE72013.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|312283385|dbj|BAJ34558.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|297827217|ref|XP_002881491.1| peroxidase 21 [Arabidopsis lyrata subsp. lyrata] gi|297327330|gb|EFH57750.1| peroxidase 21 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357440429|ref|XP_003590492.1| Peroxidase [Medicago truncatula] gi|355479540|gb|AES60743.1| Peroxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|15228090|ref|NP_181250.1| peroxidase [Arabidopsis thaliana] gi|25453196|sp|Q42580.1|PER21_ARATH RecName: Full=Peroxidase 21; Short=Atperox P21; AltName: Full=ATP2a/ATP2b; AltName: Full=PRXR5; Flags: Precursor gi|1403138|emb|CAA66863.1| peroxidase ATP2a [Arabidopsis thaliana] gi|4371288|gb|AAD18146.1| putative peroxidase ATP2a [Arabidopsis thaliana] gi|330254260|gb|AEC09354.1| peroxidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|1402912|emb|CAA66961.1| peroxidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21593054|gb|AAM65003.1| putative peroxidase ATP2a [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|388502634|gb|AFK39383.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356537521|ref|XP_003537275.1| PREDICTED: peroxidase 21-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query331
TAIR|locus:2061794327 AT2G37130 [Arabidopsis thalian 0.918 0.929 0.761 8.7e-127
TAIR|locus:2141637330 PRXR1 [Arabidopsis thaliana (t 0.897 0.9 0.583 1.2e-95
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.876 0.876 0.398 5.8e-50
TAIR|locus:2096419321 AT3G03670 [Arabidopsis thalian 0.900 0.928 0.370 2.5e-49
TAIR|locus:2080928344 AT3G50990 [Arabidopsis thalian 0.909 0.875 0.385 2.5e-49
TAIR|locus:2174693330 AT5G14130 [Arabidopsis thalian 0.888 0.890 0.384 2.5e-49
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.876 0.857 0.388 8.5e-49
TAIR|locus:2086047339 AT3G17070 [Arabidopsis thalian 0.891 0.870 0.357 8.5e-49
TAIR|locus:2154925336 AT5G66390 [Arabidopsis thalian 0.873 0.860 0.394 8.5e-49
TAIR|locus:2175951313 AT5G17820 [Arabidopsis thalian 0.882 0.932 0.377 1.1e-48
TAIR|locus:2061794 AT2G37130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
 Identities = 233/306 (76%), Positives = 262/306 (85%)

Query:    26 FYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLL 85
             F+ G  EL+ NYY +SCPKAEEII+QQV  LYYKHGNTAVSW+RNLFHDC VKSCDASLL
Sbjct:    23 FHIGNGELEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLL 82

Query:    86 LETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGP 145
             LET  GV SEQ S+RSFGMRNFKYV  IK ALE ECP  VSCADIVALSAR+GIVML GP
Sbjct:    83 LETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGP 142

Query:   146 RIP-IKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGR 204
             +I  IKTGRRDSR SYL +VE  IPNHNDS+++ +S FNSIGID E  VAL  GAHSVGR
Sbjct:   143 KIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALL-GAHSVGR 201

Query:   205 VHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKN 264
             VHCVNLVHRLYPT+DPTLDP YA YLK RCP+P PDP+AV+Y+RNDRETPM++DN YYKN
Sbjct:   202 VHCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKN 261

Query:   265 IINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRK 324
             I+ HKGLL++D +LA+DPRT PFV KMAA+N+YFHEQFSR + LLSE NPLTGDQGE+RK
Sbjct:   262 IMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRK 321

Query:   325 DCRYVN 330
             DCRYVN
Sbjct:   322 DCRYVN 327
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0050832 "defense response to fungus" evidence=IMP
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2141637 PRXR1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096419 AT3G03670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080928 AT3G50990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174693 AT5G14130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086047 AT3G17070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154925 AT5G66390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175951 AT5G17820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q42580PER21_ARATH1, ., 1, 1, ., 1, ., 70.76140.91840.9296yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.979
3rd Layer1.11.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PO2
hypothetical protein (331 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-135
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 1e-54
pfam00141180 pfam00141, peroxidase, Peroxidase 5e-46
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 2e-19
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 3e-11
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 4e-10
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 6e-09
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 6e-09
cd00692328 cd00692, ligninase, Ligninase and other manganese- 6e-07
pfam00141180 pfam00141, peroxidase, Peroxidase 9e-06
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 1e-05
COG0376 730 COG0376, KatG, Catalase (peroxidase I) [Inorganic 1e-04
TIGR00198 716 TIGR00198, cat_per_HPI, catalase/peroxidase HPI 7e-04
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  384 bits (989), Expect = e-135
 Identities = 128/303 (42%), Positives = 177/303 (58%), Gaps = 10/303 (3%)

Query: 32  ELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTG 91
           +L   +Y++SCP AE I++  V          A + +R  FHDC V+ CDAS+LL++   
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 92  VASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKT 151
             SE+ +  +  +R F  +  IKAALEA CP  VSCADI+AL+AR+ +V+ GGP   +  
Sbjct: 61  NTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPL 120

Query: 152 GRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCVNLV 211
           GRRD RVS   +V   +P+   S++  +S+F S G+    +VAL +GAH++GR HC +  
Sbjct: 121 GRRDGRVSSANDVGN-LPSPFFSVSQLISLFASKGLTVTDLVAL-SGAHTIGRAHCSSFS 178

Query: 212 HRLYPT-----VDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNII 266
            RLY        DPTLDP YA  L+ +CP    D D +V    D  TP   DN+YYKN++
Sbjct: 179 DRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGG-DDDTLVP--LDPGTPNTFDNSYYKNLL 235

Query: 267 NHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDC 326
             +GLL  DQ L SDPRT   V + AAN   F   F+ A+  +     LTG QGE+RK+C
Sbjct: 236 AGRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNC 295

Query: 327 RYV 329
           R V
Sbjct: 296 RVV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|223453 COG0376, KatG, Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|232870 TIGR00198, cat_per_HPI, catalase/peroxidase HPI Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 331
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.97
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.42
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.2e-106  Score=773.81  Aligned_cols=295  Identities=33%  Similarity=0.600  Sum_probs=279.4

Q ss_pred             cCCCCCCcchhhccCchHHHHHHHHHHHHHHhcCCchhhHHHHHhcccCcccCCCceecccCCCCccccccccCCCCchh
Q 020084           28 SGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNF  107 (331)
Q Consensus        28 ~~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSilld~~~~~~~E~~~~~N~~L~g~  107 (331)
                      ++.++|+++||++|||++|+||++.|++.+.++|+++|++|||+||||||+||||||||+++   ..||++++|.+|+||
T Consensus        20 ~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf   96 (324)
T PLN03030         20 VQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGY   96 (324)
T ss_pred             chhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchH
Confidence            44567999999999999999999999999999999999999999999999999999999964   479999999999999


Q ss_pred             HHHHHHHHHHHhhCCCccChhhHHHhhcchhhhhcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHHHCCC
Q 020084          108 KYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGI  187 (331)
Q Consensus       108 ~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl  187 (331)
                      ++||.||++||++||++|||||||||||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++||
T Consensus        97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl  175 (324)
T PLN03030         97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL  175 (324)
T ss_pred             HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999999999999999877764 899999999999999999999


Q ss_pred             ChHHHHHHhhccccccccccccccccccC------CCCCCCCHHHHHHhhcCCCCCCCCCCCcccccCCCCCCCccChHH
Q 020084          188 DDEGVVALYAGAHSVGRVHCVNLVHRLYP------TVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNY  261 (331)
Q Consensus       188 ~~~dlVaL~sGaHTiG~ahc~~f~~Rl~~------~~Dp~ld~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~tp~~FDn~Y  261 (331)
                      +.+|||+| |||||||++||.+|.+|||+      .+||+||+.|+..|++.|| ..+...+.  +++|+.||.+|||+|
T Consensus       176 ~~~DlVaL-sGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp-~~~~~~~~--~~lD~~Tp~~FDn~Y  251 (324)
T PLN03030        176 NTQDLVTL-VGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCP-QNGDGSRR--IALDTGSSNRFDASF  251 (324)
T ss_pred             CHHHheee-eeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCC-CCCCCCcc--ccCCCCCCcccccHH
Confidence            99999999 99999999999999999992      3699999999999999999 33333345  889999999999999


Q ss_pred             HHHhhcccccccchhhhccCCCCHHHHHHhhcCh----HHHHHHHHHHHHHHHhCCCCCCCCCcccccccccC
Q 020084          262 YKNIINHKGLLIVDQQLASDPRTTPFVQKMAANN----SYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYVN  330 (331)
Q Consensus       262 y~~l~~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  330 (331)
                      |+||++++|+|+|||+|+.|++|+++|++||.|+    +.|+++|++||+|||+|+|+||.+|||||+|+++|
T Consensus       252 y~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        252 FSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             HHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            9999999999999999999999999999999875    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 5e-49
1sch_A294 Peanut Peroxidase Length = 294 3e-48
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 3e-47
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 3e-46
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 5e-46
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 5e-46
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 6e-46
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 7e-46
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 9e-46
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 9e-46
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 1e-45
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 1e-45
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 1e-45
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 7e-45
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 1e-44
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 4e-44
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 3e-43
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 3e-39
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 2e-38
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 2e-08
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 2e-08
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 2e-08
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 2e-08
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 2e-08
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 2e-08
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 2e-08
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 2e-08
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 3e-08
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 3e-08
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 3e-08
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 3e-08
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 2e-07
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 3e-07
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 3e-07
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 4e-07
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 4e-07
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 4e-07
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 4e-07
1kxm_A290 Crystal Structure Of Cytochrome C Peroxidase With A 6e-07
3exb_A295 Crystal Structure Of Cytochrome C Peroxidase With A 6e-07
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 7e-07
1kxn_A289 Crystal Structure Of Cytochrome C Peroxidase With A 7e-07
3ccx_A294 Altering Substrate Specificity At The Heme Edge Of 1e-06
1cck_A291 Altering Substrate Specificity Of Cytochrome C Pero 1e-06
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 2e-06
1cpg_A296 A Cation Binding Motif Stabilizes The Compound I Ra 2e-06
2aqd_A294 Cytochrome C Peroxidase (Ccp) In Complex With 2,5- 3e-06
1cca_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 3e-06
5ccp_A296 Histidine 52 Is A Critical Residue For Rapid Format 3e-06
1dcc_A296 2.2 Angstrom Structure Of Oxyperoxidase: A Model Fo 3e-06
6ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 3e-06
4ccx_A294 Altering Substrate Specificity At The Heme Edge Of 3e-06
1a2f_A291 Probing The Strength And Character Of An Asp-His-X 3e-06
1cpd_A296 A Cation Binding Motif Stabilizes The Compound I Ra 3e-06
7ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 3e-06
1bva_A294 Manganese Binding Mutant In Cytochrome C Peroxidase 3e-06
2pcb_A296 Crystal Structure Of A Complex Between Electron Tra 3e-06
2gb8_A294 Solution Structure Of The Complex Between Yeast Iso 3e-06
1dj1_A291 Crystal Structure Of R48a Mutant Of Cytochrome C Pe 3e-06
2cep_A296 Role Of Met-230 In Intramolecular Electron Transfer 3e-06
4ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 3e-06
1mk8_A294 Crystal Structure Of A Mutant Cytochrome C Peroxida 4e-06
1cyf_A296 Identifying The Physiological Electron Transfer Sit 4e-06
4a7m_A296 Cytochrome C Peroxidase S81w Mutant Length = 296 4e-06
1cmu_A294 The Role Of Aspartate-235 In The Binding Of Cations 5e-06
1cci_A294 How Flexible Are Proteins? Trapping Of A Flexible L 5e-06
2xil_A294 The Structure Of Cytochrome C Peroxidase Compound I 5e-06
2xj5_A294 The Structure Of Cytochrome C Peroxidase Compound I 5e-06
3r98_A293 Joint Neutron And X-Ray Structure Of Cytochrome C P 5e-06
1kok_A294 Crystal Structure Of Mesopone Cytochrome C Peroxida 5e-06
1s6v_A294 Structure Of A Cytochrome C Peroxidase-Cytochrome C 6e-06
2ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 6e-06
1bem_A291 Interaction Between Proximal And Distals Regions Of 7e-06
2v23_A296 Structure Of Cytochrome C Peroxidase Mutant N184r Y 8e-06
1ccl_A291 Probing The Strength And Character Of An Asp-His-X 8e-06
2anz_A294 Cytochrome C Peroxidase In Complex With 2,6-Diamino 8e-06
3e2n_A287 Engineering Ascorbate Peroxidase Activity Into Cyto 8e-06
3m23_A291 Crystallographic And Single Crystal Spectral Analys 8e-06
1bej_A291 Interaction Between Proximal And Distals Regions Of 8e-06
4a78_A296 Cytochrome C Peroxidase M119w In Complex With Guiac 8e-06
2x07_A293 Cytochrome C Peroxidase: Engineered Ascorbate Bindi 8e-06
1ccb_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 8e-06
1a2g_A291 Probing The Strength And Character Of An Asp-His-X 8e-06
2rbu_X292 Cytochrome C Peroxidase In Complex With Cyclopentan 8e-06
2v2e_A294 Structure Of Isoniazid (Inh) Bound To Cytochrome C 9e-06
4a71_A296 Cytochrome C Peroxidase In Complex With Phenol Leng 9e-06
1ccc_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 1e-05
1bep_A291 Effect Of Unnatural Heme Substitution On Kinetics O 1e-05
1bek_A291 Effect Of Unnatural Heme Substitution On Kinetics O 1e-05
1beq_A291 Interaction Between Proximal And Distals Regions Of 1e-05
1ebe_A294 Laue Diffraction Study On The Structure Of Cytochro 2e-05
2ia8_A291 Kinetic And Crystallographic Studies Of A Redesigne 2e-05
1ds4_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 4e-05
1dse_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 4e-05
1cce_A291 Construction Of A Bis-Aquo Heme Enzyme And Replacem 4e-05
3e2o_A294 Crystal Structure Of Cytochrome C Peroxidase, N184r 5e-05
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure 
Iteration: 1

 Score =  191 bits (485), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 170/302 (56%), Gaps = 9/302 (2%)
Query: 33  LQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGV 92
           L F++Y Q+CP+AE I+++ V +   K    A   +R  FHDC V+ CDAS+LL+     
Sbjct: 9   LSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATG 68
Query: 93  ASEQASERSFGMR--NFKYVSTIKAALEAEC-PLKVSCADIVALSAREGIVMLGGPRIPI 149
             EQ +  +  +R   FK V+ I+  LE EC    VSC+DI+AL+AR+ +V+ GGP   +
Sbjct: 69  PGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDYRV 128
Query: 150 KTGRRDSR-VSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCV 208
             GRRDSR  +   +V   +P  + ++ + L++   +G+D   +V + +G H++G  HC 
Sbjct: 129 PLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTI-SGGHTIGLAHCS 187
Query: 209 NLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIINH 268
           +   RL+P  DPT+ P +   LK  CP    D   V+  R    TP + DN YY +++N 
Sbjct: 188 SFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTVLDVR----TPNVFDNKYYIDLVNR 243
Query: 269 KGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCRY 328
           +GL + DQ L ++  T P V++ A +   F EQF  +I  + +    T DQGEVR++C  
Sbjct: 244 EGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNCSV 303
Query: 329 VN 330
            N
Sbjct: 304 RN 305
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 Back     alignment and structure
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 Back     alignment and structure
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase Towards A Small Molecular Substrate Peroxidase By Substituting Tyrosine For Phe 202 Length = 291 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of Cytochrome C Peroxidase Compound I Length = 296 Back     alignment and structure
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The Enzyme:peroxide Complex Length = 296 Back     alignment and structure
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase And Cytochrome C Length = 296 Back     alignment and structure
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1- Cytochrome C And Yeast Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer Between The Oxyferryl Heme And Trp 191 In Cytochrome C Peroxidase Compound Ii Length = 296 Back     alignment and structure
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase Showing A Novel Trp-Tyr Covalent Cross-Link Length = 294 Back     alignment and structure
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of Cytochrome C Peroxidase By Structure-Based Engineering Length = 296 Back     alignment and structure
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant Length = 296 Back     alignment and structure
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An Artificial Cavity At The Radical Site Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop Length = 294 Back     alignment and structure
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii Length = 294 Back     alignment and structure
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C Peroxidase Length = 293 Back     alignment and structure
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (Mpccp) Length = 294 Back     alignment and structure
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link Length = 294 Back     alignment and structure
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a Length = 296 Back     alignment and structure
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 Back     alignment and structure
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 Back     alignment and structure
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of The Peroxidase Ferryl Intermediate Length = 291 Back     alignment and structure
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol Length = 296 Back     alignment and structure
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site Length = 293 Back     alignment and structure
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 Back     alignment and structure
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C Peroxidase Mutant N184r Y36a Length = 294 Back     alignment and structure
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol Length = 296 Back     alignment and structure
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned Manganese-Binding Site In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, With Phosphate Bound, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement With Exogenous Ligand Length = 291 Back     alignment and structure
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-112
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-110
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-110
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-108
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-107
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-106
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-101
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 7e-55
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 1e-53
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 1e-53
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 3e-49
2e39_A344 Peroxidase; heme protein, coordination geometry of 5e-42
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 2e-41
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 3e-40
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 2e-16
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 3e-12
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 7e-04
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 9e-04
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
 Score =  326 bits (839), Expect = e-112
 Identities = 104/305 (34%), Positives = 163/305 (53%), Gaps = 8/305 (2%)

Query: 32  ELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTG 91
           +LQ  +Y  SCP AE +++Q V   +  +   A   +R  FHDC V+ CDAS+LL++   
Sbjct: 1   DLQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTAN 60

Query: 92  VASEQ-ASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIK 150
             +E+ A   +  +R F+ ++  K+A+EA CP  VSCADI+A +AR+   + G     + 
Sbjct: 61  NTAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVP 120

Query: 151 TGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCVNL 210
           +GRRD  VS  +E    IP+   +    ++ F +  +  + +V L +GAHS+G  HC + 
Sbjct: 121 SGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTL-SGAHSIGVAHCSSF 179

Query: 211 VHRLY-----PTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNI 265
            +RLY       +DPTL P YA  L+  CP        +     D  TP +LDN YY  +
Sbjct: 180 TNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPIT-VSLDIITPSVLDNMYYTGV 238

Query: 266 INHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKD 325
               GLL  DQ L ++   +  V+  A N + +  +F++A+  + +   LTG QGE+R +
Sbjct: 239 QLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTN 298

Query: 326 CRYVN 330
           C  VN
Sbjct: 299 CSVVN 303
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Length = 748 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Length = 731 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query331
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1.2e-108  Score=784.50  Aligned_cols=294  Identities=35%  Similarity=0.630  Sum_probs=284.0

Q ss_pred             CCcchhhccCchHHHHHHHHHHHHHHhcCCchhhHHHHHhcccCcccCCCceecccCCCCccccccccCC-CCchhHHHH
Q 020084           33 LQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSF-GMRNFKYVS  111 (331)
Q Consensus        33 L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSilld~~~~~~~E~~~~~N~-~L~g~~~Id  111 (331)
                      |+++||++|||++|+|||+.|++++.++|+++|+|||||||||||+||||||||++++++.+|+++++|. +|+||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999988888999999999 899999999


Q ss_pred             HHHHHHHhhCCCccChhhHHHhhcchhhhhcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHHHCCCChHH
Q 020084          112 TIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEG  191 (331)
Q Consensus       112 ~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  191 (331)
                      +||++||++||++||||||||||||+||+++|||.|+|++||||++++...+++.+||+|+.++++|++.|++|||+++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHhhccccccccccccccccccC-----CCCCCCCHHHHHHhhcCCCCCCCC--CCCcccccCCCCCCCccChHHHHH
Q 020084          192 VVALYAGAHSVGRVHCVNLVHRLYP-----TVDPTLDPVYAEYLKGRCPTPDPD--PDAVVYARNDRETPMILDNNYYKN  264 (331)
Q Consensus       192 lVaL~sGaHTiG~ahc~~f~~Rl~~-----~~Dp~ld~~~~~~L~~~Cp~~~~~--~~~~~~~~lD~~tp~~FDn~Yy~~  264 (331)
                      |||| |||||||++||.+|.+|+|+     .+||+||+.|++.|++.|| ..++  +.++  ++||+.||.+|||+||+|
T Consensus       162 ~VaL-sGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp-~~~~~~~~~~--~~lD~~TP~~FDN~Yy~n  237 (304)
T 3hdl_A          162 MVTL-SGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCP-ANSTRFTPIT--VSLDIITPSVLDNMYYTG  237 (304)
T ss_dssp             HHHH-GGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSC-TTCCTTSCCE--EESCSSSTTSCSTHHHHH
T ss_pred             hhhh-hccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCC-CCCCCCCccc--cCCCCCCcccccHHHHHH
Confidence            9999 99999999999999999983     5799999999999999999 4443  4455  899999999999999999


Q ss_pred             hhcccccccchhhhccCCCCHHHHHHhhcChHHHHHHHHHHHHHHHhCCCCCCCCCcccccccccC
Q 020084          265 IINHKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYVN  330 (331)
Q Consensus       265 l~~~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  330 (331)
                      |+.++|||+|||+|+.|++|+++|++||.||+.|+++|++||+||++|+|+||.+||||++|++||
T Consensus       238 L~~~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          238 VQLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             HHTTCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             HHhCcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            999999999999999999999999999999999999999999999999999999999999999998
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 331
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 3e-95
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 6e-95
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 2e-93
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-92
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 4e-91
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 3e-90
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 2e-46
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 2e-45
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 2e-44
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 3e-28
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 4e-28
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 2e-26
d1itka1406 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch 4e-05
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  282 bits (723), Expect = 3e-95
 Identities = 101/306 (33%), Positives = 148/306 (48%), Gaps = 12/306 (3%)

Query: 33  LQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGV 92
           L   +Y ++CP    I+   +    +       S +R  FHDC V+ CD S+LL     +
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 93  ASEQASERSFG-MRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKT 151
            SEQ +  +   +R    V+ IK A+E  CP  VSCADI+A++A    V+ GGP  P+  
Sbjct: 62  ESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPL 121

Query: 152 GRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYAGAHSVGRVHCVNLV 211
           GRRDS  +      + +P    ++    + F   G++   +V L +G H+ GR  C   +
Sbjct: 122 GRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTL-SGGHTFGRARCSTFI 180

Query: 212 HRLYP-----TVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNII 266
           +RLY        DPTL+  Y E L+ RCP              D  TP   DN YY N++
Sbjct: 181 NRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGD---NLTNLDLSTPDQFDNRYYSNLL 237

Query: 267 NHKGLLIVDQQLASDP--RTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRK 324
              GLL  DQ+L S P   T P V   ++N + F   F  ++  +     LTGD+GE+R 
Sbjct: 238 QLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRL 297

Query: 325 DCRYVN 330
            C +VN
Sbjct: 298 QCNFVN 303
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query331
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.98
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=3.5e-103  Score=747.10  Aligned_cols=295  Identities=35%  Similarity=0.631  Sum_probs=284.2

Q ss_pred             CCCcchhhccCchHHHHHHHHHHHHHHhcCCchhhHHHHHhcccCcccCCCceecccCCCCccccccccCCC-CchhHHH
Q 020084           32 ELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFG-MRNFKYV  110 (331)
Q Consensus        32 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSilld~~~~~~~E~~~~~N~~-L~g~~~I  110 (331)
                      ||+.+||++|||++|+||+++|++++.+||+++|+||||+||||||+||||||||++++++.+|+++++|.+ ++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            799999999999999999999999999999999999999999999999999999999888889999999985 6899999


Q ss_pred             HHHHHHHHhhCCCccChhhHHHhhcchhhhhcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHHHCCCChH
Q 020084          111 STIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDE  190 (331)
Q Consensus       111 d~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  190 (331)
                      |.||++||++||++||||||||||||+||+++|||.|+|++||+|+++|+..++..+||.|+.++++|++.|++||||.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             HHHHHhhcccccccccccccccccc-----CCCCCCCCHHHHHHhhcCCCCCCCCCCCcccccCCCCCCCccChHHHHHh
Q 020084          191 GVVALYAGAHSVGRVHCVNLVHRLY-----PTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNI  265 (331)
Q Consensus       191 dlVaL~sGaHTiG~ahc~~f~~Rl~-----~~~Dp~ld~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~tp~~FDn~Yy~~l  265 (331)
                      ||||| |||||||++||.+|..|+|     +.+||++|+.|+..|+..|| ..+...++  +.+|..||.+|||+||+++
T Consensus       161 d~VaL-sGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~-~~~~~~~~--~~~d~~tp~~fDn~Yy~~l  236 (304)
T d1fhfa_         161 DLVTL-SGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCP-QNATGDNL--TNLDLSTPDQFDNRYYSNL  236 (304)
T ss_dssp             HHHHH-GGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSC-SSCSSCCE--EESCSSSTTSCSTHHHHHH
T ss_pred             HHHHH-hhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcC-CCCCCCcc--cccCCCCCCccccHHHHHH
Confidence            99999 9999999999999999999     35799999999999999999 44555566  8899999999999999999


Q ss_pred             hcccccccchhhhccCC--CCHHHHHHhhcChHHHHHHHHHHHHHHHhCCCCCCCCCcccccccccC
Q 020084          266 INHKGLLIVDQQLASDP--RTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYVN  330 (331)
Q Consensus       266 ~~~~glL~SD~~L~~d~--~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  330 (331)
                      +.++|+|+|||+|+.||  +|+++|++||.|+++|+++|++||+||++||||||.+||||++|+++|
T Consensus       237 ~~~~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         237 LQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             HTTCCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             hhcCcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            99999999999999997  699999999999999999999999999999999999999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure