Citrus Sinensis ID: 020115
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 331 | 2.2.26 [Sep-21-2011] | |||||||
| Q8GY91 | 329 | Putative L-ascorbate pero | yes | no | 0.897 | 0.902 | 0.593 | 1e-100 | |
| Q1PER6 | 251 | L-ascorbate peroxidase 2, | no | no | 0.652 | 0.860 | 0.384 | 1e-35 | |
| Q6ZJJ1 | 291 | Probable L-ascorbate pero | no | no | 0.637 | 0.725 | 0.395 | 2e-33 | |
| Q0JEQ2 | 291 | Probable L-ascorbate pero | no | no | 0.622 | 0.707 | 0.395 | 3e-33 | |
| Q01MI9 | 291 | Probable L-ascorbate pero | N/A | no | 0.622 | 0.707 | 0.395 | 3e-33 | |
| A2XFC7 | 250 | L-ascorbate peroxidase 1, | N/A | no | 0.622 | 0.824 | 0.398 | 5e-33 | |
| Q10N21 | 250 | L-ascorbate peroxidase 1, | no | no | 0.622 | 0.824 | 0.398 | 6e-33 | |
| P0CP54 | 377 | Cytochrome c peroxidase, | yes | no | 0.622 | 0.546 | 0.357 | 3e-32 | |
| P0CP55 | 377 | Cytochrome c peroxidase, | N/A | no | 0.622 | 0.546 | 0.357 | 3e-32 | |
| P0CP56 | 315 | Putative heme-binding per | no | no | 0.649 | 0.682 | 0.370 | 6e-32 |
| >sp|Q8GY91|APX6_ARATH Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1 | Back alignment and function desciption |
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Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/317 (59%), Positives = 235/317 (74%), Gaps = 20/317 (6%)
Query: 25 KFKFKF--PAKSQRSSLSTVE--FRANPLTISSSLVNHRGKDGSCNSNRRRRGLLLTAT- 79
KFK KF PAK++ S +T + R++ L + G ++RR+ +LL+
Sbjct: 23 KFKCKFESPAKTRLLSPATEKHVVRSSRAWRIRCLSDDPGSSHVFVASRRKMVVLLSTVQ 82
Query: 80 -LPFLLPLHEFVQDLGAKAESGMSDYLLMKEEVTKVVSKGKAASVLRLAFHDAGTFEMDD 138
L +LP + G AE Y +M+ E+ KVV+KGKAA VLRL FHDAGTFE+DD
Sbjct: 83 LLSHMLPQN------GNAAEI----YPVMQNEIRKVVTKGKAAGVLRLVFHDAGTFELDD 132
Query: 139 NSGGMNGSIVYELERPENAGLNKPLKILEKAKGDVNAIRP----DMIALGGAVAVSVCGG 194
+SGG+NGSI YELERPEN GL K LK+L KAK V+ I+P DMI++ G+ AVS+CGG
Sbjct: 133 HSGGINGSIAYELERPENIGLKKSLKVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGG 192
Query: 195 PNIPVPMGRLDSMEPDPEGKLPQETLDASGLKQCFQRKGFSAQELVALSGAHTLGTKGFG 254
P IPV +GRLDS +PDPEGKLP ETL ASGLK+CF+RKGFS QELVALSGAHT+G+KGFG
Sbjct: 193 PTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECFKRKGFSTQELVALSGAHTIGSKGFG 252
Query: 255 NPIVFDNSYYKILLEKPWQSSAGMSSMIGLPSDRALVEDDECLRWIKMYADNQNMFFEDF 314
+P VFDN+YYKILLEKPW S++ M+SM+GLPSD ALV+DDECLRW+K YA++Q+ FFEDF
Sbjct: 253 DPTVFDNAYYKILLEKPWTSTSKMTSMVGLPSDHALVQDDECLRWVKRYAEDQDKFFEDF 312
Query: 315 KNAYVKLVNSGARWRSL 331
NAY+KLVNSGA+W L
Sbjct: 313 TNAYIKLVNSGAKWNML 329
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Plays a key role in hydrogen peroxide removal. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 1EC: 1 |
| >sp|Q1PER6|APX2_ARATH L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q6ZJJ1|APX4_ORYSJ Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q0JEQ2|APX3_ORYSJ Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q01MI9|APX3_ORYSI Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2XFC7|APX1_ORYSI L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q10N21|APX1_ORYSJ L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1 | Back alignment and function description |
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| >sp|P0CP54|CCPR_CRYNJ Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CCP1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P0CP55|CCPR_CRYNB Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CCP1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P0CP56|CCPR2_CRYNJ Putative heme-binding peroxidase OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CNE03890 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 331 | ||||||
| 224092480 | 337 | predicted protein [Populus trichocarpa] | 0.918 | 0.902 | 0.733 | 1e-124 | |
| 225430293 | 330 | PREDICTED: putative L-ascorbate peroxida | 0.909 | 0.912 | 0.731 | 1e-123 | |
| 255548910 | 328 | L-ascorbate peroxidase 1, cytosolic, put | 0.942 | 0.951 | 0.689 | 1e-117 | |
| 356515434 | 319 | PREDICTED: putative L-ascorbate peroxida | 0.879 | 0.912 | 0.671 | 1e-108 | |
| 357466209 | 320 | hypothetical protein MTR_3g107060 [Medic | 0.891 | 0.921 | 0.654 | 1e-108 | |
| 255635954 | 319 | unknown [Glycine max] | 0.879 | 0.912 | 0.671 | 1e-107 | |
| 449441908 | 338 | PREDICTED: putative L-ascorbate peroxida | 0.996 | 0.976 | 0.582 | 1e-105 | |
| 356515436 | 347 | PREDICTED: putative L-ascorbate peroxida | 0.879 | 0.838 | 0.614 | 1e-103 | |
| 297802798 | 329 | hypothetical protein ARALYDRAFT_913218 [ | 0.969 | 0.975 | 0.578 | 1e-101 | |
| 312282817 | 330 | unnamed protein product [Thellungiella h | 0.969 | 0.972 | 0.567 | 1e-100 |
| >gi|224092480|ref|XP_002309628.1| predicted protein [Populus trichocarpa] gi|222855604|gb|EEE93151.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/312 (73%), Positives = 257/312 (82%), Gaps = 8/312 (2%)
Query: 27 KFKFPAKSQRSSLSTVEFRANPLTISS--SLVNHRGKDGSCNSNRRRRGLLLTATLPFLL 84
+FKFPAKSQR STV+FRA P + S N G+ C S RR L+ +TLPFL
Sbjct: 27 EFKFPAKSQRPFSSTVKFRAKPFKACAFPSNNNDNGEKDDCFSTRRSL-LVCISTLPFLF 85
Query: 85 PLHEFVQDLGAKA-ESGMSDYLLMKEEVTKVVSKGKAASVLRLAFHDAGTFEMDDNSGGM 143
LHEF++DL AKA +S + Y+L+KEEV KVVSKGKAA VLRL FHDAGTFEMD NSGGM
Sbjct: 86 GLHEFLEDLSAKALQSDTNTYMLIKEEVRKVVSKGKAAGVLRLVFHDAGTFEMDGNSGGM 145
Query: 144 NGSIVYELERPENAGLNKPLKILEKAKGDVNAIR----PDMIALGGAVAVSVCGGPNIPV 199
NGSIVYELERPENAGL K LKIL+KAKG+V+AI+ DMIA+ GA AVSVCGGP IPV
Sbjct: 146 NGSIVYELERPENAGLKKSLKILDKAKGEVDAIQQVSWADMIAVAGAEAVSVCGGPTIPV 205
Query: 200 PMGRLDSMEPDPEGKLPQETLDASGLKQCFQRKGFSAQELVALSGAHTLGTKGFGNPIVF 259
+GRLDS+EPD EGKLP+E+LDA GLKQ F+RKG S QELVALSGAHTLG+KGFG+P VF
Sbjct: 206 QLGRLDSLEPDAEGKLPRESLDAPGLKQNFKRKGLSTQELVALSGAHTLGSKGFGSPFVF 265
Query: 260 DNSYYKILLEKPWQSSAGMSSMIGLPSDRALVEDDECLRWIKMYADNQNMFFEDFKNAYV 319
DNSYYKILLEKPW+SS GMSSMIGLPSD ALVEDDECLRWIK YADNQNMFF+DFKNAY+
Sbjct: 266 DNSYYKILLEKPWKSSGGMSSMIGLPSDHALVEDDECLRWIKKYADNQNMFFDDFKNAYI 325
Query: 320 KLVNSGARWRSL 331
KLVNSGARW+SL
Sbjct: 326 KLVNSGARWKSL 337
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225430293|ref|XP_002282677.1| PREDICTED: putative L-ascorbate peroxidase 6 [Vitis vinifera] gi|296082040|emb|CBI21045.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255548910|ref|XP_002515511.1| L-ascorbate peroxidase 1, cytosolic, putative [Ricinus communis] gi|223545455|gb|EEF46960.1| L-ascorbate peroxidase 1, cytosolic, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356515434|ref|XP_003526405.1| PREDICTED: putative L-ascorbate peroxidase 6-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357466209|ref|XP_003603389.1| hypothetical protein MTR_3g107060 [Medicago truncatula] gi|355492437|gb|AES73640.1| hypothetical protein MTR_3g107060 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|255635954|gb|ACU18323.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|449441908|ref|XP_004138724.1| PREDICTED: putative L-ascorbate peroxidase 6-like [Cucumis sativus] gi|449499251|ref|XP_004160766.1| PREDICTED: putative L-ascorbate peroxidase 6-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356515436|ref|XP_003526406.1| PREDICTED: putative L-ascorbate peroxidase 6-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|297802798|ref|XP_002869283.1| hypothetical protein ARALYDRAFT_913218 [Arabidopsis lyrata subsp. lyrata] gi|297315119|gb|EFH45542.1| hypothetical protein ARALYDRAFT_913218 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|312282817|dbj|BAJ34274.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 331 | ||||||
| TAIR|locus:2127766 | 329 | APX6 "ascorbate peroxidase 6" | 0.688 | 0.693 | 0.711 | 2.2e-89 | |
| TAIR|locus:2074914 | 251 | APX2 "ascorbate peroxidase 2" | 0.622 | 0.820 | 0.4 | 1.7e-34 | |
| TAIR|locus:2026616 | 250 | APX1 "ascorbate peroxidase 1" | 0.622 | 0.824 | 0.367 | 8.8e-31 | |
| TAIR|locus:2125409 | 279 | APX5 "ascorbate peroxidase 5" | 0.619 | 0.734 | 0.382 | 1e-29 | |
| TAIR|locus:2131586 | 287 | APX3 "ascorbate peroxidase 3" | 0.622 | 0.717 | 0.386 | 1.3e-29 | |
| ASPGD|ASPL0000029968 | 312 | AN5440 [Emericella nidulans (t | 0.574 | 0.608 | 0.342 | 2.3e-29 | |
| TAIR|locus:2204735 | 426 | TAPX "thylakoidal ascorbate pe | 0.480 | 0.373 | 0.368 | 1.2e-28 | |
| TAIR|locus:2137435 | 372 | SAPX "stromal ascorbate peroxi | 0.486 | 0.432 | 0.355 | 2.2e-28 | |
| UNIPROTKB|O04873 | 421 | O04873 "Thylakoid-bound ascorb | 0.450 | 0.353 | 0.365 | 1e-27 | |
| CGD|CAL0000335 | 291 | orf19.584 [Candida albicans (t | 0.495 | 0.563 | 0.347 | 8.5e-26 |
| TAIR|locus:2127766 APX6 "ascorbate peroxidase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 165/232 (71%), Positives = 198/232 (85%)
Query: 104 YLLMKEEVTKVVSKGKAASVLRLAFHDAGTFEMDDNSGGMNGSIVYELERPENAGLNKPL 163
Y +M+ E+ KVV+KGKAA VLRL FHDAGTFE+DD+SGG+NGSI YELERPEN GL K L
Sbjct: 98 YPVMQNEIRKVVTKGKAAGVLRLVFHDAGTFELDDHSGGINGSIAYELERPENIGLKKSL 157
Query: 164 KILEKAKGDVNAIRP----DMIALGGAVAVSVCGGPNIPVPMGRLDSMEPDPEGKLPQET 219
K+L KAK V+ I+P DMI++ G+ AVS+CGGP IPV +GRLDS +PDPEGKLP ET
Sbjct: 158 KVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPET 217
Query: 220 LDASGLKQCFQRKGFSAQELVALSGAHTLGTKGFGNPIVFDNSYYKILLEKPWQSSAGMS 279
L ASGLK+CF+RKGFS QELVALSGAHT+G+KGFG+P VFDN+YYKILLEKPW S++ M+
Sbjct: 218 LSASGLKECFKRKGFSTQELVALSGAHTIGSKGFGDPTVFDNAYYKILLEKPWTSTSKMT 277
Query: 280 SMIGLPSDRALVEDDECLRWIKMYADNQNMFFEDFKNAYVKLVNSGARWRSL 331
SM+GLPSD ALV+DDECLRW+K YA++Q+ FFEDF NAY+KLVNSGA+W L
Sbjct: 278 SMVGLPSDHALVQDDECLRWVKRYAEDQDKFFEDFTNAYIKLVNSGAKWNML 329
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| TAIR|locus:2074914 APX2 "ascorbate peroxidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2026616 APX1 "ascorbate peroxidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2125409 APX5 "ascorbate peroxidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2131586 APX3 "ascorbate peroxidase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000029968 AN5440 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| TAIR|locus:2204735 TAPX "thylakoidal ascorbate peroxidase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2137435 SAPX "stromal ascorbate peroxidase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O04873 O04873 "Thylakoid-bound ascorbate peroxidase" [Cucurbita cv. Kurokawa Amakuri (taxid:3666)] | Back alignment and assigned GO terms |
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| CGD|CAL0000335 orf19.584 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8GY91 | APX6_ARATH | 1, ., 1, 1, ., 1, ., 1, 1 | 0.5930 | 0.8972 | 0.9027 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.11.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 331 | |||
| cd00691 | 253 | cd00691, ascorbate_peroxidase, Ascorbate peroxidas | 2e-70 | |
| cd00314 | 255 | cd00314, plant_peroxidase_like, Heme-dependent per | 5e-60 | |
| pfam00141 | 180 | pfam00141, peroxidase, Peroxidase | 1e-44 | |
| PLN02879 | 251 | PLN02879, PLN02879, L-ascorbate peroxidase | 1e-44 | |
| PLN02608 | 289 | PLN02608, PLN02608, L-ascorbate peroxidase | 3e-44 | |
| PLN02364 | 250 | PLN02364, PLN02364, L-ascorbate peroxidase 1 | 3e-36 | |
| cd00693 | 298 | cd00693, secretory_peroxidase, Horseradish peroxid | 9e-32 | |
| cd08201 | 264 | cd08201, plant_peroxidase_like_1, Uncharacterized | 1e-26 | |
| cd00692 | 328 | cd00692, ligninase, Ligninase and other manganese- | 7e-23 | |
| COG0376 | 730 | COG0376, KatG, Catalase (peroxidase I) [Inorganic | 3e-14 | |
| PLN03030 | 324 | PLN03030, PLN03030, cationic peroxidase; Provision | 1e-08 | |
| cd08200 | 297 | cd08200, catalase_peroxidase_2, C-terminal non-cat | 2e-04 | |
| TIGR00198 | 716 | TIGR00198, cat_per_HPI, catalase/peroxidase HPI | 5e-04 | |
| cd00649 | 409 | cd00649, catalase_peroxidase_1, N-terminal catalyt | 7e-04 | |
| TIGR00198 | 716 | TIGR00198, cat_per_HPI, catalase/peroxidase HPI | 0.001 |
| >gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases | Back alignment and domain information |
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Score = 219 bits (560), Expect = 2e-70
Identities = 93/243 (38%), Positives = 141/243 (58%), Gaps = 27/243 (11%)
Query: 107 MKEEVTKVVSKGKAASVL-RLAFHDAGTFEMDDNSGGMNGSIVY--ELERPENAGLNKPL 163
+ ++ K++ A +L RLA+HD+GT++ + +GG NG+I + EL NAGL+
Sbjct: 16 ARNDIAKLIDDKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFDPELNHGANAGLDIAR 75
Query: 164 KILEKAKGDVNAIRP-----DMIALGGAVAVSVCGGPNIPVPMGRLDSMEPD---PEGKL 215
K+LE K P D+ L G VA+ GGP IP GR+D+ +P+ PEG+L
Sbjct: 76 KLLEPIK----KKYPDISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRL 131
Query: 216 PQETLDASGLKQCFQRKGFSAQELVALSGAHTLGT-----KGFG-----NPIVFDNSYYK 265
P + A L+ F R GF+ QE+VALSGAHTLG G+ NP+ FDNSY+K
Sbjct: 132 PDASKGADHLRDVFYRMGFNDQEIVALSGAHTLGRCHKERSGYDGPWTKNPLKFDNSYFK 191
Query: 266 ILLEKPWQSSAGMSSMIGLPSDRALVEDDECLRWIKMYADNQNMFFEDFKNAYVKLVNSG 325
LLE+ W+ ++ LP+D+AL+ED + ++++YA +Q+ FF+D+ A+ KL G
Sbjct: 192 ELLEEDWKLPTP--GLLMLPTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELG 249
Query: 326 ARW 328
+
Sbjct: 250 VPF 252
|
Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. Length = 253 |
| >gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases | Back alignment and domain information |
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| >gnl|CDD|215745 pfam00141, peroxidase, Peroxidase | Back alignment and domain information |
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| >gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase | Back alignment and domain information |
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| >gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase | Back alignment and domain information |
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| >gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 | Back alignment and domain information |
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| >gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases | Back alignment and domain information |
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| >gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins | Back alignment and domain information |
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| >gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases | Back alignment and domain information |
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| >gnl|CDD|223453 COG0376, KatG, Catalase (peroxidase I) [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional | Back alignment and domain information |
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| >gnl|CDD|173828 cd08200, catalase_peroxidase_2, C-terminal non-catalytic domain of catalase-peroxidases | Back alignment and domain information |
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| >gnl|CDD|232870 TIGR00198, cat_per_HPI, catalase/peroxidase HPI | Back alignment and domain information |
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| >gnl|CDD|173824 cd00649, catalase_peroxidase_1, N-terminal catalytic domain of catalase-peroxidases | Back alignment and domain information |
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| >gnl|CDD|232870 TIGR00198, cat_per_HPI, catalase/peroxidase HPI | Back alignment and domain information |
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Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 331 | |||
| PLN02879 | 251 | L-ascorbate peroxidase | 100.0 | |
| PLN02608 | 289 | L-ascorbate peroxidase | 100.0 | |
| cd00693 | 298 | secretory_peroxidase Horseradish peroxidase and re | 100.0 | |
| PLN03030 | 324 | cationic peroxidase; Provisional | 100.0 | |
| PLN02364 | 250 | L-ascorbate peroxidase 1 | 100.0 | |
| cd00691 | 253 | ascorbate_peroxidase Ascorbate peroxidases and cyt | 100.0 | |
| cd00692 | 328 | ligninase Ligninase and other manganese-dependent | 100.0 | |
| cd00649 | 409 | catalase_peroxidase_1 N-terminal catalytic domain | 100.0 | |
| cd00314 | 255 | plant_peroxidase_like Heme-dependent peroxidases s | 100.0 | |
| PF00141 | 230 | peroxidase: Peroxidase; InterPro: IPR002016 Peroxi | 100.0 | |
| TIGR00198 | 716 | cat_per_HPI catalase/peroxidase HPI. Note that the | 100.0 | |
| PRK15061 | 726 | catalase/hydroperoxidase HPI(I); Provisional | 100.0 | |
| cd08200 | 297 | catalase_peroxidase_2 C-terminal non-catalytic dom | 100.0 | |
| cd08201 | 264 | plant_peroxidase_like_1 Uncharacterized family of | 100.0 | |
| TIGR00198 | 716 | cat_per_HPI catalase/peroxidase HPI. Note that the | 100.0 | |
| PRK15061 | 726 | catalase/hydroperoxidase HPI(I); Provisional | 100.0 | |
| COG0376 | 730 | KatG Catalase (peroxidase I) [Inorganic ion transp | 100.0 | |
| COG0376 | 730 | KatG Catalase (peroxidase I) [Inorganic ion transp | 99.79 |
| >PLN02879 L-ascorbate peroxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-60 Score=446.26 Aligned_cols=223 Identities=39% Similarity=0.670 Sum_probs=205.6
Q ss_pred hHHHHHHHHHHHHHhc-CChHHHHHHHhhccccccccCCCCCCCCcccc--cccCcCcCCChhHHHHHHHHHHhhcccCc
Q 020115 102 SDYLLMKEEVTKVVSK-GKAASVLRLAFHDAGTFEMDDNSGGMNGSIVY--ELERPENAGLNKPLKILEKAKGDVNAIRP 178 (331)
Q Consensus 102 ~~~~iV~~~V~~~~~~-~~aa~lLRL~FHDc~s~~~~~~~gG~dGSi~~--E~~~p~N~gL~~~~~~I~~iK~~~e~~c~ 178 (331)
+++.-++++|.+.+.+ +.+|.+|||+||||+||+..++.|||||||++ |+++|+|.||+.++++|++||+++..++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~~E~~~~~N~gL~~~~~~i~~iK~~~~~VSc 94 (251)
T PLN02879 15 KAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRLLDPIKELFPILSY 94 (251)
T ss_pred HHHHHHHHHHHHHHhCCCchhHhHHHHHhhhccccCCCCCCCCCeeecChhhccCCCcCChHHHHHHHHHHHHHcCCcCH
Confidence 4455667788888765 78999999999999999999999999999998 99999999998899999999999977665
Q ss_pred -hhhhhcccceeeccCCCCcCCCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHcCCChhhHHHHhcCcccCCCCC----
Q 020115 179 -DMIALGGAVAVSVCGGPNIPVPMGRLDSMEPDPEGKLPQETLDASGLKQCFQRKGFSAQELVALSGAHTLGTKGF---- 253 (331)
Q Consensus 179 -DiialAa~~AV~~~GGP~i~v~~GR~D~~~s~~~~~LP~p~~~~~~L~~~F~~~Gls~~EmVaLsGaHTiG~~~~---- 253 (331)
|||+|||++||+.+|||.|+|++||+|+.+++++++||.|+.++++|++.|+++||+++|||||+||||||++|-
T Consensus 95 ADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsGaHTiG~ah~~r~g 174 (251)
T PLN02879 95 ADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGGHTLGRCHKERSG 174 (251)
T ss_pred HHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeecccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999752
Q ss_pred ------CCCccccchHHHHHhhcCccccCCCCCccccccccccccChhHHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCC
Q 020115 254 ------GNPIVFDNSYYKILLEKPWQSSAGMSSMIGLPSDRALVEDDECLRWIKMYADNQNMFFEDFKNAYVKLVNSGAR 327 (331)
Q Consensus 254 ------~tP~~FDN~Yyk~Ll~~~w~~~~Gl~~~~~L~SD~~L~~D~~t~~~V~~yA~dq~~F~~dFa~Am~KM~~lgv~ 327 (331)
.+|.+|||+||++|+.+.++ | .++|+||++|+.|++|+++|++||.||++|+++|+.||+||+++|+.
T Consensus 175 ~~g~~d~tp~~FDN~Yy~~ll~~~~~---g---ll~L~SD~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 175 FEGAWTPNPLIFDNSYFKEILSGEKE---G---LLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred CCCCCCCCccceeHHHHHHHHcCCcC---C---CccchhhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 37999999999999987432 4 45689999999999999999999999999999999999999999999
Q ss_pred CCC
Q 020115 328 WRS 330 (331)
Q Consensus 328 ~~~ 330 (331)
+++
T Consensus 249 ~~~ 251 (251)
T PLN02879 249 DKE 251 (251)
T ss_pred CCC
Confidence 875
|
|
| >PLN02608 L-ascorbate peroxidase | Back alignment and domain information |
|---|
| >cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases | Back alignment and domain information |
|---|
| >PLN03030 cationic peroxidase; Provisional | Back alignment and domain information |
|---|
| >PLN02364 L-ascorbate peroxidase 1 | Back alignment and domain information |
|---|
| >cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases | Back alignment and domain information |
|---|
| >cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases | Back alignment and domain information |
|---|
| >cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases | Back alignment and domain information |
|---|
| >cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases | Back alignment and domain information |
|---|
| >PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions | Back alignment and domain information |
|---|
| >TIGR00198 cat_per_HPI catalase/peroxidase HPI | Back alignment and domain information |
|---|
| >PRK15061 catalase/hydroperoxidase HPI(I); Provisional | Back alignment and domain information |
|---|
| >cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases | Back alignment and domain information |
|---|
| >cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins | Back alignment and domain information |
|---|
| >TIGR00198 cat_per_HPI catalase/peroxidase HPI | Back alignment and domain information |
|---|
| >PRK15061 catalase/hydroperoxidase HPI(I); Provisional | Back alignment and domain information |
|---|
| >COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 331 | ||||
| 1apx_A | 249 | Crystal Structure Of Recombinant Ascorbate Peroxida | 3e-32 | ||
| 1stq_A | 294 | Cyrstal Structure Of Cytochrome C Peroxidase Mutant | 1e-31 | ||
| 1oaf_A | 261 | Ascobate Peroxidase From Soybean Cytosol In Complex | 1e-31 | ||
| 2vcf_X | 264 | Structure Of Isoniazid (Inh) Bound To Cytosolic Soy | 1e-31 | ||
| 2cl4_X | 261 | Ascorbate Peroxidase R172a Mutant Length = 261 | 1e-31 | ||
| 2xif_A | 249 | The Structure Of Ascorbate Peroxidase Compound Ii L | 1e-31 | ||
| 1jci_A | 294 | Stabilization Of The Engineered Cation-Binding Loop | 1e-31 | ||
| 2ggn_X | 261 | Conformational Mobility In The Active Site Of A Hem | 3e-31 | ||
| 2y6b_A | 249 | Ascorbate Peroxidase R38k Mutant Length = 249 | 4e-31 | ||
| 1sog_A | 294 | Cyrstal Structure Of Cytochrome C Peroxidase Mutant | 5e-31 | ||
| 1jdr_A | 294 | Crystal Structure Of A Proximal Domain Potassium Bi | 9e-31 | ||
| 1krj_A | 294 | Engineering Calcium-Binding Site Into Cytochrome C | 9e-31 | ||
| 2y6a_A | 249 | Ascorbate Peroxidase R38a Mutant Length = 249 | 1e-30 | ||
| 2vcs_A | 261 | Structure Of Isoniazid (Inh) Bound To Cytosolic Soy | 2e-30 | ||
| 3zcy_A | 249 | Ascorbate Peroxidase W41a-h42y Mutant Length = 249 | 2e-30 | ||
| 3zch_A | 261 | Ascorbate Peroxidase W41a-h42m Mutant Length = 261 | 6e-30 | ||
| 3zcg_A | 261 | Ascorbate Peroxidase W41a-h42c Mutant Length = 261 | 8e-30 | ||
| 3e2n_A | 287 | Engineering Ascorbate Peroxidase Activity Into Cyto | 3e-29 | ||
| 4ccp_A | 296 | X-Ray Structures Of Recombinant Yeast Cytochrome C | 5e-29 | ||
| 4a78_A | 296 | Cytochrome C Peroxidase M119w In Complex With Guiac | 6e-29 | ||
| 1cck_A | 291 | Altering Substrate Specificity Of Cytochrome C Pero | 6e-29 | ||
| 2cep_A | 296 | Role Of Met-230 In Intramolecular Electron Transfer | 6e-29 | ||
| 2x07_A | 293 | Cytochrome C Peroxidase: Engineered Ascorbate Bindi | 6e-29 | ||
| 2xj5_A | 294 | The Structure Of Cytochrome C Peroxidase Compound I | 8e-29 | ||
| 1kok_A | 294 | Crystal Structure Of Mesopone Cytochrome C Peroxida | 8e-29 | ||
| 3r98_A | 293 | Joint Neutron And X-Ray Structure Of Cytochrome C P | 9e-29 | ||
| 2xil_A | 294 | The Structure Of Cytochrome C Peroxidase Compound I | 9e-29 | ||
| 4a71_A | 296 | Cytochrome C Peroxidase In Complex With Phenol Leng | 1e-28 | ||
| 1ebe_A | 294 | Laue Diffraction Study On The Structure Of Cytochro | 1e-28 | ||
| 3m23_A | 291 | Crystallographic And Single Crystal Spectral Analys | 1e-28 | ||
| 2v23_A | 296 | Structure Of Cytochrome C Peroxidase Mutant N184r Y | 1e-28 | ||
| 4a7m_A | 296 | Cytochrome C Peroxidase S81w Mutant Length = 296 | 1e-28 | ||
| 2v2e_A | 294 | Structure Of Isoniazid (Inh) Bound To Cytochrome C | 1e-28 | ||
| 1a2g_A | 291 | Probing The Strength And Character Of An Asp-His-X | 1e-28 | ||
| 3exb_A | 295 | Crystal Structure Of Cytochrome C Peroxidase With A | 1e-28 | ||
| 1a2f_A | 291 | Probing The Strength And Character Of An Asp-His-X | 1e-28 | ||
| 1dcc_A | 296 | 2.2 Angstrom Structure Of Oxyperoxidase: A Model Fo | 1e-28 | ||
| 1kxn_A | 289 | Crystal Structure Of Cytochrome C Peroxidase With A | 1e-28 | ||
| 1kxm_A | 290 | Crystal Structure Of Cytochrome C Peroxidase With A | 1e-28 | ||
| 1bva_A | 294 | Manganese Binding Mutant In Cytochrome C Peroxidase | 1e-28 | ||
| 2ia8_A | 291 | Kinetic And Crystallographic Studies Of A Redesigne | 1e-28 | ||
| 1cca_A | 297 | The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con | 1e-28 | ||
| 1cyf_A | 296 | Identifying The Physiological Electron Transfer Sit | 2e-28 | ||
| 2pcb_A | 296 | Crystal Structure Of A Complex Between Electron Tra | 2e-28 | ||
| 1bek_A | 291 | Effect Of Unnatural Heme Substitution On Kinetics O | 2e-28 | ||
| 3ccx_A | 294 | Altering Substrate Specificity At The Heme Edge Of | 2e-28 | ||
| 1beq_A | 291 | Interaction Between Proximal And Distals Regions Of | 2e-28 | ||
| 2gb8_A | 294 | Solution Structure Of The Complex Between Yeast Iso | 2e-28 | ||
| 1bep_A | 291 | Effect Of Unnatural Heme Substitution On Kinetics O | 2e-28 | ||
| 4ccx_A | 294 | Altering Substrate Specificity At The Heme Edge Of | 2e-28 | ||
| 1s6v_A | 294 | Structure Of A Cytochrome C Peroxidase-Cytochrome C | 3e-28 | ||
| 1cpg_A | 296 | A Cation Binding Motif Stabilizes The Compound I Ra | 3e-28 | ||
| 1bem_A | 291 | Interaction Between Proximal And Distals Regions Of | 3e-28 | ||
| 2aqd_A | 294 | Cytochrome C Peroxidase (Ccp) In Complex With 2,5- | 4e-28 | ||
| 1cpd_A | 296 | A Cation Binding Motif Stabilizes The Compound I Ra | 4e-28 | ||
| 2rbu_X | 292 | Cytochrome C Peroxidase In Complex With Cyclopentan | 4e-28 | ||
| 1bej_A | 291 | Interaction Between Proximal And Distals Regions Of | 4e-28 | ||
| 1mk8_A | 294 | Crystal Structure Of A Mutant Cytochrome C Peroxida | 4e-28 | ||
| 2anz_A | 294 | Cytochrome C Peroxidase In Complex With 2,6-Diamino | 4e-28 | ||
| 6ccp_A | 296 | Effect Of Arginine-48 Replacement On The Reaction B | 5e-28 | ||
| 1ccb_A | 297 | The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con | 5e-28 | ||
| 2ccp_A | 296 | X-Ray Structures Of Recombinant Yeast Cytochrome C | 6e-28 | ||
| 3e2o_A | 294 | Crystal Structure Of Cytochrome C Peroxidase, N184r | 6e-28 | ||
| 1ccl_A | 291 | Probing The Strength And Character Of An Asp-His-X | 8e-28 | ||
| 1cmu_A | 294 | The Role Of Aspartate-235 In The Binding Of Cations | 1e-27 | ||
| 1dj1_A | 291 | Crystal Structure Of R48a Mutant Of Cytochrome C Pe | 1e-27 | ||
| 1cci_A | 294 | How Flexible Are Proteins? Trapping Of A Flexible L | 1e-27 | ||
| 1ccc_A | 297 | The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con | 1e-27 | ||
| 7ccp_A | 296 | Effect Of Arginine-48 Replacement On The Reaction B | 2e-27 | ||
| 5ccp_A | 296 | Histidine 52 Is A Critical Residue For Rapid Format | 4e-27 | ||
| 1cce_A | 291 | Construction Of A Bis-Aquo Heme Enzyme And Replacem | 4e-27 | ||
| 1ds4_A | 292 | Cytochrome C Peroxidase H175g Mutant, Imidazole Com | 4e-27 | ||
| 1dse_A | 292 | Cytochrome C Peroxidase H175g Mutant, Imidazole Com | 8e-27 | ||
| 1iyn_A | 295 | Crystal Structure Of Chloroplastic Ascorbate Peroxi | 2e-26 | ||
| 3riw_A | 271 | The Crystal Structure Of Leishmania Major Peroxidas | 4e-25 | ||
| 4ged_A | 268 | Crystal Structure Of The Leishmania Major Peroxidas | 4e-25 | ||
| 3riv_A | 271 | The Crystal Structure Of Leishmania Major Peroxidas | 4e-25 | ||
| 4a5g_A | 308 | Raphanus Sativus Anionic Peroxidase. Length = 308 | 1e-12 | ||
| 1sch_A | 294 | Peanut Peroxidase Length = 294 | 9e-12 | ||
| 1pa2_A | 306 | Arabidopsis Thaliana Peroxidase A2 Length = 306 | 2e-10 | ||
| 3fmu_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 3e-10 | ||
| 3rrw_A | 268 | Crystal Structure Of The Tl29 Protein From Arabidop | 3e-10 | ||
| 1fhf_A | 304 | The Structure Of Soybean Peroxidase Length = 304 | 3e-10 | ||
| 2w23_A | 316 | Structure Of Mutant W169y Of Pleurotus Eryngii Vers | 3e-10 | ||
| 4fcs_A | 315 | The Crystal Structures Of Several Mutants Of Pleuro | 3e-10 | ||
| 2vka_A | 317 | Site-directed Mutagenesis Of The Catalytic Tryptoph | 4e-10 | ||
| 3fm1_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 4e-10 | ||
| 3fm6_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 4e-10 | ||
| 4fef_A | 315 | The Crystal Structures Of Several Mutants Of Pleuro | 5e-10 | ||
| 3fkg_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 5e-10 | ||
| 2boq_A | 331 | Crystal Structure Of Versatile Peroxidase Length = | 5e-10 | ||
| 3fm4_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 6e-10 | ||
| 3fjw_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 6e-10 | ||
| 4g05_A | 317 | The Crystal Structures Of Several Mutants Of Pleuro | 9e-10 | ||
| 4fdq_A | 315 | The Crystal Structures Of Several Mutants Of Pleuro | 9e-10 | ||
| 4fcn_A | 319 | The Crystal Structures Of Several Mutants Of Pleuro | 1e-09 | ||
| 1gwo_A | 309 | Recombinant Horseradish Peroxidase C1a Ala170gln Le | 1e-09 | ||
| 1w4w_A | 323 | Ferric Horseradish Peroxidase C1a In Complex With F | 3e-09 | ||
| 1atj_A | 306 | Recombinant Horseradish Peroxidase C1a Length = 306 | 3e-09 | ||
| 1gwu_A | 309 | Recombinant Horseradish Peroxidase C1a Ala140gly Le | 3e-09 | ||
| 2atj_A | 308 | Recombinant Horseradish Peroxidase Complex With Ben | 4e-09 | ||
| 6atj_A | 308 | Recombinant Horseradish Peroxidase C Complex With F | 4e-09 | ||
| 1gx2_A | 309 | Recombinant Horseradish Peroxidase Phe209ser Comple | 4e-09 | ||
| 3atj_A | 309 | Heme Ligand Mutant Of Recombinant Horseradish Perox | 4e-09 | ||
| 1gw2_A | 308 | Recombinant Horseradish Peroxidase C1a Thr171ser In | 1e-08 | ||
| 2ylj_A | 306 | Horse Radish Peroxidase, Mutant S167y Length = 306 | 2e-08 | ||
| 4atj_A | 309 | Distal Heme Pocket Mutant (H42e) Of Recombinant Hor | 4e-08 | ||
| 1qgj_A | 300 | Arabidopsis Thaliana Peroxidase N Length = 300 | 5e-08 | ||
| 1kzm_A | 308 | Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan | 3e-07 | ||
| 3hdl_A | 304 | Crystal Structure Of Highly Glycosylated Peroxidase | 2e-06 | ||
| 1bgp_A | 309 | Crystal Structure Of Barley Grain Peroxidase 1 Leng | 2e-05 | ||
| 1b80_A | 351 | Rec. Lignin Peroxidase H8 Oxidatively Processed Len | 5e-05 | ||
| 1ly8_A | 343 | The Crystal Structure Of A Mutant Enzyme Of Coprinu | 6e-05 | ||
| 3q3u_A | 338 | Trametes Cervina Lignin Peroxidase Length = 338 | 6e-05 | ||
| 1b85_A | 351 | Lignin Peroxidase Length = 351 | 7e-05 | ||
| 1b82_A | 351 | Pristine Recomb. Lignin Peroxidase H8 Length = 351 | 1e-04 | ||
| 1lga_A | 343 | Crystallographic Refinement Of Lignin Peroxidase At | 1e-04 | ||
| 1qpa_A | 345 | Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65) Length | 1e-04 | ||
| 1mn2_A | 357 | Manganese Peroxidase Substrate Binding Site Mutant | 8e-04 |
| >pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 | Back alignment and structure |
|
| >pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 | Back alignment and structure |
| >pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 | Back alignment and structure |
| >pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 | Back alignment and structure |
| >pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 | Back alignment and structure |
| >pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 | Back alignment and structure |
| >pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 | Back alignment and structure |
| >pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 | Back alignment and structure |
| >pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 | Back alignment and structure |
| >pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 | Back alignment and structure |
| >pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 | Back alignment and structure |
| >pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 | Back alignment and structure |
| >pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 | Back alignment and structure |
| >pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 | Back alignment and structure |
| >pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 | Back alignment and structure |
| >pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 | Back alignment and structure |
| >pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 | Back alignment and structure |
| >pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 | Back alignment and structure |
| >pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol Length = 296 | Back alignment and structure |
| >pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase Towards A Small Molecular Substrate Peroxidase By Substituting Tyrosine For Phe 202 Length = 291 | Back alignment and structure |
| >pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer Between The Oxyferryl Heme And Trp 191 In Cytochrome C Peroxidase Compound Ii Length = 296 | Back alignment and structure |
| >pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site Length = 293 | Back alignment and structure |
| >pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii Length = 294 | Back alignment and structure |
| >pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (Mpccp) Length = 294 | Back alignment and structure |
| >pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C Peroxidase Length = 293 | Back alignment and structure |
| >pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I Length = 294 | Back alignment and structure |
| >pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol Length = 296 | Back alignment and structure |
| >pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C Peroxidase Compound I Length = 294 | Back alignment and structure |
| >pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of The Peroxidase Ferryl Intermediate Length = 291 | Back alignment and structure |
| >pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a Length = 296 | Back alignment and structure |
| >pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant Length = 296 | Back alignment and structure |
| >pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C Peroxidase Mutant N184r Y36a Length = 294 | Back alignment and structure |
| >pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 | Back alignment and structure |
| >pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 | Back alignment and structure |
| >pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 | Back alignment and structure |
| >pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The Enzyme:peroxide Complex Length = 296 | Back alignment and structure |
| >pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 | Back alignment and structure |
| >pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 | Back alignment and structure |
| >pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned Manganese-Binding Site In Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 | Back alignment and structure |
| >pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of Cytochrome C Peroxidase By Structure-Based Engineering Length = 296 | Back alignment and structure |
| >pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase And Cytochrome C Length = 296 | Back alignment and structure |
| >pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1- Cytochrome C And Yeast Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link Length = 294 | Back alignment and structure |
| >pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 | Back alignment and structure |
| >pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 | Back alignment and structure |
| >pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 | Back alignment and structure |
| >pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 | Back alignment and structure |
| >pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase Showing A Novel Trp-Tyr Covalent Cross-Link Length = 294 | Back alignment and structure |
| >pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 | Back alignment and structure |
| >pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 | Back alignment and structure |
| >pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 | Back alignment and structure |
| >pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 | Back alignment and structure |
| >pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant Length = 294 | Back alignment and structure |
| >pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 | Back alignment and structure |
| >pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An Artificial Cavity At The Radical Site Of Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop Length = 294 | Back alignment and structure |
| >pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 | Back alignment and structure |
| >pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 | Back alignment and structure |
| >pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of Cytochrome C Peroxidase Compound I Length = 296 | Back alignment and structure |
| >pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement With Exogenous Ligand Length = 291 | Back alignment and structure |
| >pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, Ph 6, 100k Length = 292 | Back alignment and structure |
| >pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, With Phosphate Bound, Ph 6, 100k Length = 292 | Back alignment and structure |
| >pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 | Back alignment and structure |
| >pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 | Back alignment and structure |
| >pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 | Back alignment and structure |
| >pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 | Back alignment and structure |
| >pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 | Back alignment and structure |
| >pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 | Back alignment and structure |
| >pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 | Back alignment and structure |
| >pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|3RRW|A Chain A, Crystal Structure Of The Tl29 Protein From Arabidopsis Thaliana Length = 268 | Back alignment and structure |
| >pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 | Back alignment and structure |
| >pdb|2W23|A Chain A, Structure Of Mutant W169y Of Pleurotus Eryngii Versatile Peroxidase (Vp) Length = 316 | Back alignment and structure |
| >pdb|4FCS|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 315 | Back alignment and structure |
| >pdb|2VKA|A Chain A, Site-directed Mutagenesis Of The Catalytic Tryptophan Environment In Pleurotus Eryngii Versatile Peroxidase Length = 317 | Back alignment and structure |
| >pdb|3FM1|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|4FEF|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 315 | Back alignment and structure |
| >pdb|3FKG|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|2BOQ|A Chain A, Crystal Structure Of Versatile Peroxidase Length = 331 | Back alignment and structure |
| >pdb|3FM4|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|3FJW|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 317 | Back alignment and structure |
| >pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 315 | Back alignment and structure |
| >pdb|4FCN|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 319 | Back alignment and structure |
| >pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 | Back alignment and structure |
| >pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 | Back alignment and structure |
| >pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 | Back alignment and structure |
| >pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 | Back alignment and structure |
| >pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 | Back alignment and structure |
| >pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 | Back alignment and structure |
| >pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 | Back alignment and structure |
| >pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 | Back alignment and structure |
| >pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 | Back alignment and structure |
| >pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 | Back alignment and structure |
| >pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 | Back alignment and structure |
| >pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 | Back alignment and structure |
| >pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 | Back alignment and structure |
| >pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 | Back alignment and structure |
| >pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 | Back alignment and structure |
| >pdb|1B80|A Chain A, Rec. Lignin Peroxidase H8 Oxidatively Processed Length = 351 | Back alignment and structure |
| >pdb|1LY8|A Chain A, The Crystal Structure Of A Mutant Enzyme Of Coprinus Cinereus Peroxidase Provides An Understanding Of Its Increased Thermostability And Insight Into Modelling Of Protein Structures Length = 343 | Back alignment and structure |
| >pdb|3Q3U|A Chain A, Trametes Cervina Lignin Peroxidase Length = 338 | Back alignment and structure |
| >pdb|1B85|A Chain A, Lignin Peroxidase Length = 351 | Back alignment and structure |
| >pdb|1B82|A Chain A, Pristine Recomb. Lignin Peroxidase H8 Length = 351 | Back alignment and structure |
| >pdb|1LGA|A Chain A, Crystallographic Refinement Of Lignin Peroxidase At 2 Angstroms Length = 343 | Back alignment and structure |
| >pdb|1QPA|A Chain A, Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65) Length = 345 | Back alignment and structure |
| >pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q, D179n Length = 357 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 | Back alignment and structure |
|---|
Score = 240 bits (615), Expect = 8e-79
Identities = 76/264 (28%), Positives = 127/264 (48%), Gaps = 29/264 (10%)
Query: 97 AESGMSDYLLMKEEVTKVVSKGKAAS--VLRLAFHDAGTFEMDDNSGGMNGSIVY---EL 151
+E D ++ ++ ++S+ ++RLA+H+A +++ G N + + E
Sbjct: 2 SEEPPFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKKDGSPNSASMRFKPEC 61
Query: 152 ERPENAGLNKPLKILEKAKGDVNAI-RPDMIALGGAVAVSVCGGPNIPVPMGRLDSMEPD 210
N GL+ P K LE K I D+ L VA+ GGP IP GR+D+ +
Sbjct: 62 LYAGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGS 121
Query: 211 ---PEGKLPQETLDASGLKQCFQRKGFSAQELVALSGAHTLG-----TKGFG-----NPI 257
P+G+LP + S +++ F+R GF+ QE VAL GAHT G G+ +
Sbjct: 122 VCGPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGPWTHDKN 181
Query: 258 VFDNSYYKILLEKPWQSS----------AGMSSMIGLPSDRALVEDDECLRWIKMYADNQ 307
FDNS++ LL++ W + + ++ LPSD L+ D +++++YA +
Sbjct: 182 GFDNSFFTQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLDPSYRKYVELYAKDN 241
Query: 308 NMFFEDFKNAYVKLVNSGARWRSL 331
+ F +DF NA+ KL G R
Sbjct: 242 DRFNKDFANAFKKLTELGTRNLHK 265
|
| >2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 | Back alignment and structure |
|---|
| >3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 | Back alignment and structure |
|---|
| >3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 | Back alignment and structure |
|---|
| >1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 | Back alignment and structure |
|---|
| >3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 | Back alignment and structure |
|---|
| >2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 | Back alignment and structure |
|---|
| >1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 | Back alignment and structure |
|---|
| >3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 | Back alignment and structure |
|---|
| >3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 | Back alignment and structure |
|---|
| >1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 | Back alignment and structure |
|---|
| >1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 | Back alignment and structure |
|---|
| >3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 | Back alignment and structure |
|---|
| >1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 | Back alignment and structure |
|---|
| >1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 | Back alignment and structure |
|---|
| >1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 | Back alignment and structure |
|---|
| >1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 | Back alignment and structure |
|---|
| >1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Length = 720 | Back alignment and structure |
|---|
| >1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Length = 720 | Back alignment and structure |
|---|
| >3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Length = 764 | Back alignment and structure |
|---|
| >3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Length = 764 | Back alignment and structure |
|---|
| >1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Length = 731 | Back alignment and structure |
|---|
| >1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Length = 731 | Back alignment and structure |
|---|
| >3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Length = 748 | Back alignment and structure |
|---|
| >3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Length = 748 | Back alignment and structure |
|---|
| >2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Length = 740 | Back alignment and structure |
|---|
| >2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Length = 740 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 331 | |||
| 3hdl_A | 304 | Royal PALM TREE peroxidase; glycosylated, oxidored | 100.0 | |
| 1sch_A | 294 | PNP, peanut peroxidase, major cationic isozyme; ca | 100.0 | |
| 1fhf_A | 304 | SEED coat peroxidase; oxidoreductase; HET: HEM; 2. | 100.0 | |
| 1pa2_A | 306 | Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 | 100.0 | |
| 1gwu_A | 309 | Peroxidase C1A; oxidoreductase, glycoprotein, heme | 100.0 | |
| 1qgj_A | 300 | Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A | 100.0 | |
| 1iyn_A | 295 | Chloroplastic ascorbate peroxidase; hydrogen perox | 100.0 | |
| 1bgp_A | 309 | Barley grain peroxidase; chromoprotein, oxidoreduc | 100.0 | |
| 2vcn_A | 261 | Ascorbate peroxidase; INH, APX, isoniazid, oxidore | 100.0 | |
| 3e2o_A | 294 | CCP, cytochrome C peroxidase; cytochrome C peroxid | 100.0 | |
| 3fmu_A | 331 | VersatIle peroxidase VPL2; class II (fungal) perox | 100.0 | |
| 3riv_A | 271 | Ascorbate peroxidase; alpha helical bundle, heme p | 100.0 | |
| 3q3u_A | 338 | Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A | 100.0 | |
| 3m5q_A | 357 | Manganese peroxidase 1; heme, Mn(II)-binding site, | 100.0 | |
| 2e39_A | 344 | Peroxidase; heme protein, coordination geometry of | 100.0 | |
| 3ut2_A | 764 | Catalase-peroxidase 2; KATG, fungal, heme enzyme, | 100.0 | |
| 2cca_A | 740 | Peroxidase/catalase T; oxidoreductase, catalase-pe | 100.0 | |
| 1ub2_A | 720 | Catalase-peroxidase; KATG, cyanobacteria, oxidored | 100.0 | |
| 3vli_A | 737 | Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 | 100.0 | |
| 1itk_A | 731 | Catalase-peroxidase; heme protein, oxidoreductase; | 100.0 | |
| 1llp_A | 343 | LIP4.15, lignin peroxidase; heme protein, glyco pr | 100.0 | |
| 3n3r_A | 748 | Catalase-peroxidase; E198A variant, tuberclosis, i | 100.0 | |
| 1u2k_A | 309 | Peroxidase/catalase HPI; KATG, catalase-peroxidase | 100.0 | |
| 3rrw_A | 268 | Thylakoid lumenal 29 kDa protein, chloroplastic; c | 100.0 | |
| 3vli_A | 737 | Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 | 100.0 | |
| 2cca_A | 740 | Peroxidase/catalase T; oxidoreductase, catalase-pe | 100.0 | |
| 1ub2_A | 720 | Catalase-peroxidase; KATG, cyanobacteria, oxidored | 100.0 | |
| 1itk_A | 731 | Catalase-peroxidase; heme protein, oxidoreductase; | 100.0 | |
| 3n3r_A | 748 | Catalase-peroxidase; E198A variant, tuberclosis, i | 100.0 | |
| 3ut2_A | 764 | Catalase-peroxidase 2; KATG, fungal, heme enzyme, | 100.0 |
| >3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-64 Score=484.88 Aligned_cols=220 Identities=29% Similarity=0.416 Sum_probs=204.8
Q ss_pred cccccCCChhHHHHHHHHHHHHHhc--CChHHHHHHHhhccccccccCCCCCCCCcccc--------cccCcCcC-CChh
Q 020115 93 LGAKAESGMSDYLLMKEEVTKVVSK--GKAASVLRLAFHDAGTFEMDDNSGGMNGSIVY--------ELERPENA-GLNK 161 (331)
Q Consensus 93 ~~~~~~~~~~~~~iV~~~V~~~~~~--~~aa~lLRL~FHDc~s~~~~~~~gG~dGSi~~--------E~~~p~N~-gL~~ 161 (331)
..||..+||.+|.||+++|++++.+ +++|++|||+||||+ ++||||||++ |+++++|. +| +
T Consensus 4 ~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCf-------v~GCDgSiLld~t~~~~~Ek~~~~N~~~l-r 75 (304)
T 3hdl_A 4 IGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCF-------VRGCDASVLLDSTANNTAEKDAIPNNPSL-R 75 (304)
T ss_dssp ETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHT-------TTSSSSGGGCCCBTTBCCGGGSTTTTTTC-C
T ss_pred cChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheeccc-------CCCCCeeeeecCCCCCcccccCCCcccch-H
Confidence 4689999999999999999999986 789999999999997 7999999874 89999999 67 7
Q ss_pred HHHHHHHHHHhhcccCc------hhhhhcccceeeccCCCCcCCCCCCCCCCCCCC---CCCCCCCCccHHHHHHHHHHc
Q 020115 162 PLKILEKAKGDVNAIRP------DMIALGGAVAVSVCGGPNIPVPMGRLDSMEPDP---EGKLPQETLDASGLKQCFQRK 232 (331)
Q Consensus 162 ~~~~I~~iK~~~e~~c~------DiialAa~~AV~~~GGP~i~v~~GR~D~~~s~~---~~~LP~p~~~~~~L~~~F~~~ 232 (331)
||++|++||+++|+.|| |||+||||+||+++|||.|+|++||+|+.++.+ .++||+|+.++++|++.|++|
T Consensus 76 gf~vid~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~ 155 (304)
T 3hdl_A 76 GFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANK 155 (304)
T ss_dssp CHHHHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHc
Confidence 99999999999999998 999999999999999999999999999999864 568999999999999999999
Q ss_pred CCChhhHHHHhcCcccCCCC----------C--------------------------------------CCCccccchHH
Q 020115 233 GFSAQELVALSGAHTLGTKG----------F--------------------------------------GNPIVFDNSYY 264 (331)
Q Consensus 233 Gls~~EmVaLsGaHTiG~~~----------~--------------------------------------~tP~~FDN~Yy 264 (331)
||+++|||||+||||||++| | .+|.+|||+||
T Consensus 156 Gl~~~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy 235 (304)
T 3hdl_A 156 TLTADEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYY 235 (304)
T ss_dssp TCCHHHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHH
T ss_pred CCCHHHhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHH
Confidence 99999999999999999743 1 36789999999
Q ss_pred HHHhhcCccccCCCCCccccccccccccChhHHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCC
Q 020115 265 KILLEKPWQSSAGMSSMIGLPSDRALVEDDECLRWIKMYADNQNMFFEDFKNAYVKLVNSGARWRS 330 (331)
Q Consensus 265 k~Ll~~~w~~~~Gl~~~~~L~SD~~L~~D~~t~~~V~~yA~dq~~F~~dFa~Am~KM~~lgv~~~~ 330 (331)
++|+.++ | +|+|||+|+.|++|+++|++||.||++|+++|++||+||+++||++.+
T Consensus 236 ~nL~~~~-----g-----lL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~ 291 (304)
T 3hdl_A 236 TGVQLTL-----G-----LLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGT 291 (304)
T ss_dssp HHHHTTC-----C-----CSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTT
T ss_pred HHHHhCc-----C-----CCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999986 6 599999999999999999999999999999999999999999999753
|
| >1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 | Back alignment and structure |
|---|
| >1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 | Back alignment and structure |
|---|
| >1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* | Back alignment and structure |
|---|
| >1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... | Back alignment and structure |
|---|
| >1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 | Back alignment and structure |
|---|
| >1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 | Back alignment and structure |
|---|
| >1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 | Back alignment and structure |
|---|
| >2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... | Back alignment and structure |
|---|
| >3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... | Back alignment and structure |
|---|
| >3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* | Back alignment and structure |
|---|
| >3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* | Back alignment and structure |
|---|
| >3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 | Back alignment and structure |
|---|
| >3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* | Back alignment and structure |
|---|
| >2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* | Back alignment and structure |
|---|
| >3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} | Back alignment and structure |
|---|
| >2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* | Back alignment and structure |
|---|
| >1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 | Back alignment and structure |
|---|
| >3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* | Back alignment and structure |
|---|
| >1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 | Back alignment and structure |
|---|
| >1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* | Back alignment and structure |
|---|
| >3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* | Back alignment and structure |
|---|
| >1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A | Back alignment and structure |
|---|
| >3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* | Back alignment and structure |
|---|
| >2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* | Back alignment and structure |
|---|
| >1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 | Back alignment and structure |
|---|
| >1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 | Back alignment and structure |
|---|
| >3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* | Back alignment and structure |
|---|
| >3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 331 | ||||
| d2euta1 | 291 | a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B | 3e-48 | |
| d1llpa_ | 343 | a.93.1.1 (A:) Fungal peroxidase (ligninase) {White | 7e-45 | |
| d1oafa_ | 250 | a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci | 5e-44 | |
| d2e39a1 | 336 | a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { | 1e-43 | |
| d1fhfa_ | 304 | a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m | 3e-41 | |
| d1scha_ | 294 | a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy | 6e-41 | |
| d1yyda1 | 357 | a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { | 1e-40 | |
| d1gwua_ | 307 | a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor | 2e-39 | |
| d1iyna_ | 275 | a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco | 8e-39 | |
| d1qgja_ | 300 | a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A | 5e-38 | |
| d1pa2a_ | 306 | a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A | 9e-38 | |
| d1bgpa_ | 309 | a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu | 8e-37 | |
| d1ub2a2 | 294 | a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Syn | 4e-29 | |
| d1u2ka_ | 292 | a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholder | 3e-28 | |
| d1mwva2 | 308 | a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Bur | 4e-27 | |
| d1mwva1 | 406 | a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk | 5e-27 | |
| d1ub2a1 | 406 | a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Syne | 2e-26 | |
| d1itka2 | 308 | a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Arc | 8e-26 | |
| d2ccaa1 | 410 | a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco | 8e-24 | |
| d1itka1 | 406 | a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch | 4e-23 | |
| d2ccaa2 | 285 | a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Myc | 1e-16 |
| >d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: CCP-like domain: Cytochrome c peroxidase, CCP species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 161 bits (408), Expect = 3e-48
Identities = 81/250 (32%), Positives = 123/250 (49%), Gaps = 25/250 (10%)
Query: 106 LMKEEVTKVVSKGKAASVLRLAFHDAGTFEMDDNSGGMNGSIV---YELERPENAGLNKP 162
++E+ G ++RLA+H +GT++ DN+GG G E P NAGL
Sbjct: 26 KLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNG 85
Query: 163 LKILEKAKGDVNAI-RPDMIALGGAVAVSVCGGPNIPVPMGRLDSMEP--DPEGKLPQET 219
K LE + I D+ +LGG AV GP IP GR+D+ E G+LP
Sbjct: 86 FKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDAD 145
Query: 220 LDASGLKQCFQRKGFSAQELVALSGAHTLG-----TKGFGNPI-----VFDNSYYKILLE 269
DA ++ FQR + +E+VAL GAH LG G+ P VF N +Y LL
Sbjct: 146 KDAGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLN 205
Query: 270 KPWQSSAGMSSM---------IGLPSDRALVEDDECLRWIKMYADNQNMFFEDFKNAYVK 320
+ W+ ++ + LP+D +L++D + L +K YA++Q+ FF+DF A+ K
Sbjct: 206 EDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEK 265
Query: 321 LVNSGARWRS 330
L+ +G +
Sbjct: 266 LLENGITFPK 275
|
| >d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 | Back information, alignment and structure |
|---|
| >d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 | Back information, alignment and structure |
|---|
| >d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 | Back information, alignment and structure |
|---|
| >d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 | Back information, alignment and structure |
|---|
| >d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 | Back information, alignment and structure |
|---|
| >d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 | Back information, alignment and structure |
|---|
| >d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 | Back information, alignment and structure |
|---|
| >d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 | Back information, alignment and structure |
|---|
| >d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 | Back information, alignment and structure |
|---|
| >d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 | Back information, alignment and structure |
|---|
| >d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 | Back information, alignment and structure |
|---|
| >d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 294 | Back information, alignment and structure |
|---|
| >d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 292 | Back information, alignment and structure |
|---|
| >d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 308 | Back information, alignment and structure |
|---|
| >d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 | Back information, alignment and structure |
|---|
| >d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 406 | Back information, alignment and structure |
|---|
| >d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 308 | Back information, alignment and structure |
|---|
| >d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 | Back information, alignment and structure |
|---|
| >d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 | Back information, alignment and structure |
|---|
| >d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 285 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 331 | |||
| d1fhfa_ | 304 | Plant peroxidase {Soybean (Glycine max) [TaxId: 38 | 100.0 | |
| d1pa2a_ | 306 | Plant peroxidase {Mouse-ear cress (Arabidopsis tha | 100.0 | |
| d1qgja_ | 300 | Plant peroxidase {Mouse-ear cress (Arabidopsis tha | 100.0 | |
| d1iyna_ | 275 | Ascorbate peroxidase {Common tobacco (Nicotiana ta | 100.0 | |
| d1bgpa_ | 309 | Plant peroxidase {Barley (Hordeum vulgare), peroxi | 100.0 | |
| d1scha_ | 294 | Plant peroxidase {Peanut (Arachis hypogaea) [TaxId | 100.0 | |
| d1gwua_ | 307 | Plant peroxidase {Horseradish (Armoracia rusticana | 100.0 | |
| d1oafa_ | 250 | Ascorbate peroxidase {Soybean (Glycine max) [TaxId | 100.0 | |
| d2euta1 | 291 | Cytochrome c peroxidase, CCP {Baker's yeast (Sacch | 100.0 | |
| d2e39a1 | 336 | Fungal peroxidase (ligninase) {Arthromyces ramosus | 100.0 | |
| d1yyda1 | 357 | Fungal peroxidase (ligninase) {Basidomycetos fungu | 100.0 | |
| d1llpa_ | 343 | Fungal peroxidase (ligninase) {White rot basidiomy | 100.0 | |
| d1itka1 | 406 | Catalase-peroxidase KatG {Archaeon Haloarcula mari | 100.0 | |
| d1mwva1 | 406 | Catalase-peroxidase KatG {Burkholderia pseudomalle | 100.0 | |
| d1mwva2 | 308 | Catalase-peroxidase KatG {Burkholderia pseudomalle | 100.0 | |
| d1u2ka_ | 292 | Catalase-peroxidase KatG {Burkholderia pseudomalle | 100.0 | |
| d2ccaa1 | 410 | Catalase-peroxidase KatG {Mycobacterium tuberculos | 100.0 | |
| d1ub2a2 | 294 | Catalase-peroxidase KatG {Synechococcus sp. pcc 79 | 100.0 | |
| d1itka2 | 308 | Catalase-peroxidase KatG {Archaeon Haloarcula mari | 100.0 | |
| d1ub2a1 | 406 | Catalase-peroxidase KatG {Synechococcus sp. pcc 79 | 100.0 | |
| d2ccaa2 | 285 | Catalase-peroxidase KatG {Mycobacterium tuberculos | 100.0 |
| >d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: CCP-like domain: Plant peroxidase species: Soybean (Glycine max) [TaxId: 3847]
Probab=100.00 E-value=2.6e-62 Score=467.07 Aligned_cols=220 Identities=30% Similarity=0.491 Sum_probs=204.3
Q ss_pred cccccCCChhHHHHHHHHHHHHHhc--CChHHHHHHHhhccccccccCCCCCCCCcccc--------cccCcCcCCChhH
Q 020115 93 LGAKAESGMSDYLLMKEEVTKVVSK--GKAASVLRLAFHDAGTFEMDDNSGGMNGSIVY--------ELERPENAGLNKP 162 (331)
Q Consensus 93 ~~~~~~~~~~~~~iV~~~V~~~~~~--~~aa~lLRL~FHDc~s~~~~~~~gG~dGSi~~--------E~~~p~N~gL~~~ 162 (331)
.+||.++||.+|.||+++|++.+.. +++|++|||+||||+ ++||||||++ |+++++|.++.++
T Consensus 4 ~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCf-------v~GCDgSill~~~~~~~~E~~~~~N~~~~~g 76 (304)
T d1fhfa_ 4 PTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCF-------VQGCDGSVLLNNTDTIESEQDALPNINSIRG 76 (304)
T ss_dssp TTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHT-------TTCSSSGGGCCCCSSCCCGGGSTTTTTTCCC
T ss_pred CccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhc-------cCCCCeeEeecCCCCccccccCCcccccchh
Confidence 5689999999999999999999986 789999999999997 7999999974 8999999998899
Q ss_pred HHHHHHHHHhhcccCc------hhhhhcccceeeccCCCCcCCCCCCCCCCCCC---CCCCCCCCCccHHHHHHHHHHcC
Q 020115 163 LKILEKAKGDVNAIRP------DMIALGGAVAVSVCGGPNIPVPMGRLDSMEPD---PEGKLPQETLDASGLKQCFQRKG 233 (331)
Q Consensus 163 ~~~I~~iK~~~e~~c~------DiialAa~~AV~~~GGP~i~v~~GR~D~~~s~---~~~~LP~p~~~~~~L~~~F~~~G 233 (331)
+++|+.||+++|..|| |||+||||+||+++|||.|+|++||+|+.++. +.++||.|..++++|++.|++||
T Consensus 77 ~~~id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G 156 (304)
T d1fhfa_ 77 LDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQG 156 (304)
T ss_dssp HHHHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcC
Confidence 9999999999999988 99999999999999999999999999999985 45679999999999999999999
Q ss_pred CChhhHHHHhcCcccCCCC----------------------------------------------CCCCccccchHHHHH
Q 020115 234 FSAQELVALSGAHTLGTKG----------------------------------------------FGNPIVFDNSYYKIL 267 (331)
Q Consensus 234 ls~~EmVaLsGaHTiG~~~----------------------------------------------~~tP~~FDN~Yyk~L 267 (331)
|+.+|||||+||||||.+| ..+|.+|||+||+++
T Consensus 157 l~~~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l 236 (304)
T d1fhfa_ 157 LNTLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNL 236 (304)
T ss_dssp CCHHHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHH
T ss_pred CCHHHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHH
Confidence 9999999999999999753 035889999999999
Q ss_pred hhcCccccCCCCCccccccccccccCh--hHHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCC
Q 020115 268 LEKPWQSSAGMSSMIGLPSDRALVEDD--ECLRWIKMYADNQNMFFEDFKNAYVKLVNSGARWR 329 (331)
Q Consensus 268 l~~~w~~~~Gl~~~~~L~SD~~L~~D~--~t~~~V~~yA~dq~~F~~dFa~Am~KM~~lgv~~~ 329 (331)
+.++ | +|+||++|+.|| +|+++|+.||.||++|+++|++||+||+++||++-
T Consensus 237 ~~~~-----g-----lL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg 290 (304)
T d1fhfa_ 237 LQLN-----G-----LLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTG 290 (304)
T ss_dssp HTTC-----C-----SSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCT
T ss_pred hhcC-----c-----ccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9876 6 599999999997 69999999999999999999999999999999874
|
| >d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
| >d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} | Back information, alignment and structure |
|---|
| >d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} | Back information, alignment and structure |
|---|
| >d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} | Back information, alignment and structure |
|---|
| >d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
| >d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} | Back information, alignment and structure |
|---|
| >d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} | Back information, alignment and structure |
|---|
| >d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} | Back information, alignment and structure |
|---|
| >d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} | Back information, alignment and structure |
|---|
| >d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
| >d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} | Back information, alignment and structure |
|---|
| >d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|