Citrus Sinensis ID: 020152

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
MVALSTKPAIEQFPYIETCCTTSALFTSTSNSIPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFSEKEKSGPPSPFGYGNKCIGRNGDVGWVEYLLLNTNQDSNSSLGNNPDQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYPPRPDRISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRVLANSLKSRVSMIYFGGPPLSERIAPLPSLMKNPEQSLYKEFTWFEYKRSAYNSRLAENRLMHFERIAAS
ccccccccccccccccccccccccccccccccccEEEcccccHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccEEEEEcccccccccccccccccccccccccEEEEEcccccEEEEEccccEEEcccccccEEEEEccEEEEEEcccccccccEEEEcccccEEEEEEEcccccccEEEccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHcc
ccccccccHHcEccccccccccccccccccccccEEEcccccHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHccHHHHHHHccccccccccEEEccccccccHEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccEEEEcccccccccccHcccccccccccEEEEEEccccccEEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEcccccEEcccHHHcccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHcc
mvalstkpaieqfpyietccttsalftstsnsiplidlsnpdskNLLVKACEEFGFfkvinhgvplesisRLESEAIRffslpfsekeksgppspfgygnkcigrngdVGWVEYLLLNtnqdsnsslgnnpdQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMdeqsdsvfrlnhypprpdrisnligfgehtdpQIISVLRSNntsglqislregswisvppdedsffinvgdslqvltngrfksvKHRVLANSLKSRVSMiyfggpplseriaplpslmknpeqslyKEFTWFEYKRSAYNSRLAENRLMHFERIAAS
mvalstkpaieqfpyIETCCTTSALFTSTSNSIPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLpfsekeksgppspfgygNKCIGRNGDVGWVEYLLLNTNqdsnsslgnnPDQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYPPRPDRISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVltngrfksvKHRVLANSLKSRVSMIYFGGPPLSERIAPLPSLMKNPEQSLYKEFTWFEYKRSAYNSRLAENRLMHFERIAAS
MVALSTKPAIEQFPYIETCCTTSALFTSTSNSIPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFSEKEKSGPPSPFGYGNKCIGRNGDVGWVEYLLLNTNQDSNSSLGNNPDQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYPPRPDRISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRVLANSLKSRVSMIYFGGPPLSERIAPLPSLMKNPEQSLYKEFTWFEYKRSAYNSRLAENRLMHFERIAAS
********AIEQFPYIETCCTTSALFTSTSNSIPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLP************FGYGNKCIGRNGDVGWVEYLLLNT*************QFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYPPRPDRISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRVLANSLKSRVSMIYFGGPPLS**I************SLYKEFTWFEYKRSAYNSRLAENRLM********
*******PAIEQFPY**************SNSIPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFS************YGNKCIGRNGDVGWVEYLLLNTNQDSNSSLGNNPDQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYPPRPDRISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRVLANSLKSRVSMIYFGGPPLSERIAPLPSLMKNPEQSLYKEFTWFEYKRSAYNSRLAENRLMHFERIA**
MVALSTKPAIEQFPYIETCCTTSALFTSTSNSIPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFS********SPFGYGNKCIGRNGDVGWVEYLLLNTNQDSNSSLGNNPDQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYPPRPDRISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRVLANSLKSRVSMIYFGGPPLSERIAPLPSLMKNPEQSLYKEFTWFEYKRSAYNSRLAENRLMHFERIAAS
****STKPAIEQFPYIETCCTTSALFTSTSNSIPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFSEKEKSGPPSPFGYGNKCIGRNGDVGWVEYLLLNTNQDSNSSLGNNPDQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYPPRPDRISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRVLANSLKSRVSMIYFGGPPLSERIAPLPSLMKNPEQSLYKEFTWFEYKRSAYNSRLAENRLMHFERIAA*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MVALSTKPAIEQFPYIETCCTTSALFTSTSNSIPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFSEKEKSGPPSPFGYGNKCIGRNGDVGWVEYLLLNTNQDSNSSLGNNPDQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYPPRPDRISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRVLANSLKSRVSMIYFGGPPLSERIAPLPSLMKNPEQSLYKEFTWFEYKRSAYNSRLAENRLMHFERIAAS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query330 2.2.26 [Sep-21-2011]
Q9SQ80327 Gibberellin 2-beta-dioxyg N/A no 0.978 0.987 0.694 1e-131
Q9XG83332 Gibberellin 2-beta-dioxyg N/A no 0.978 0.972 0.637 1e-118
Q8LEA2329 Gibberellin 2-beta-dioxyg yes no 0.887 0.890 0.652 1e-111
Q9XFR9341 Gibberellin 2-beta-dioxyg no no 0.903 0.873 0.593 1e-106
O64692335 Gibberellin 2-beta-dioxyg no no 0.890 0.877 0.553 2e-96
Q9XHM5345 Gibberellin 2-beta-dioxyg N/A no 0.887 0.849 0.517 5e-85
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.866 0.792 0.324 7e-41
Q39103358 Gibberellin 3-beta-dioxyg no no 0.845 0.779 0.331 3e-38
Q96330336 Flavonol synthase/flavano no no 0.866 0.851 0.326 5e-38
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.845 0.772 0.314 5e-37
>sp|Q9SQ80|G2OX1_PEA Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1 Back     alignment and function desciption
 Score =  467 bits (1202), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 232/334 (69%), Positives = 276/334 (82%), Gaps = 11/334 (3%)

Query: 1   MVALSTKPAIEQFPYIETCCTTSALFTSTSNSIPLIDLSNPDSKNLLVKACEEFGFFKVI 60
           MV LS KP  EQ+ Y+      + +  + S+SIPL+DLS PD+K L+VKACE+FGFFKVI
Sbjct: 1   MVLLS-KPTSEQYTYVR-----NNMPITFSSSIPLVDLSKPDAKTLIVKACEDFGFFKVI 54

Query: 61  NHGVPLESISRLESEAIRFFSLPFSEKEKSGPPSPFGYGNKCIGRNGDVGWVEYLLLNTN 120
           NHG+PL++IS+LESEA +FFSLP +EKEK+GP +PFGYGNK IG NGD+GW+EYLLL TN
Sbjct: 55  NHGIPLDAISQLESEAFKFFSLPQTEKEKAGPANPFGYGNKRIGLNGDIGWIEYLLLTTN 114

Query: 121 QDSNSSL-GNNPDQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMDEQSDS 179
           QD N SL G + D+FR  L +Y  A++ MACEIL+LMA+GLKIQP+NV SKL+MD+QSD 
Sbjct: 115 QDHNFSLYGEDIDKFRGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDC 174

Query: 180 VFRLNHYPPRPDRI---SNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDED 236
           +FR+NHYP  P+      NLIGFGEHTDPQIIS+LRSNNTSG QISLR+GSWISVPPD  
Sbjct: 175 LFRVNHYPACPELAINGENLIGFGEHTDPQIISILRSNNTSGFQISLRDGSWISVPPDHS 234

Query: 237 SFFINVGDSLQVLTNGRFKSVKHRVLANSLKSRVSMIYFGGPPLSERIAPLPSLMKNPEQ 296
           SFFINVGDSLQV+TNGRFKSV+HRVLAN +  R+SMIYF GPPLSE+IAPLPSLMK  E 
Sbjct: 235 SFFINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYFCGPPLSEKIAPLPSLMKGKE- 293

Query: 297 SLYKEFTWFEYKRSAYNSRLAENRLMHFERIAAS 330
           SLYKEFTWFEYK S Y SRLA+NRL ++ERIAA+
Sbjct: 294 SLYKEFTWFEYKSSTYGSRLADNRLGNYERIAAT 327
Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins, leading to the homeostatic regulation of their endogenous level. Catabolism of gibberellins (GAs) plays a central role in plant development. Converts GA9/GA20 to GA51/GA29 and GA4/GA1 to GA34/GA8.
Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 3
>sp|Q9XG83|G2OX_PHACN Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1 Back     alignment and function description
>sp|Q8LEA2|G2OX1_ARATH Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2 Back     alignment and function description
>sp|Q9XFR9|G2OX2_ARATH Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1 Back     alignment and function description
>sp|O64692|G2OX3_ARATH Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1 Back     alignment and function description
>sp|Q9XHM5|G2OX2_PEA Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|Q39103|G3OX1_ARATH Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2 Back     alignment and function description
>sp|Q96330|FLS1_ARATH Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1 Back     alignment and function description
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query330
224061332332 gibberellin 2-oxidase [Populus trichocar 0.978 0.972 0.748 1e-142
340796359332 GA2ox2 [Gossypium hirsutum] 0.984 0.978 0.744 1e-142
224114543332 gibberellin 2-oxidase [Populus trichocar 0.978 0.972 0.736 1e-140
350285025337 GA2-oxidase [Pyrus communis] 0.972 0.952 0.735 1e-140
399936317332 gibberellin 2-oxidase [Populus tomentosa 0.978 0.972 0.730 1e-140
255040359337 gibberellin 2-oxidase [Malus x domestica 0.972 0.952 0.727 1e-139
51011366332 GA 2-oxidase 2 [Nerium oleander] 0.978 0.972 0.728 1e-138
449438955342 PREDICTED: gibberellin 2-beta-dioxygenas 0.903 0.871 0.771 1e-137
340796357331 GA2ox1 [Gossypium hirsutum] 0.975 0.972 0.716 1e-136
225470621323 PREDICTED: gibberellin 2-beta-dioxygenas 0.966 0.987 0.729 1e-135
>gi|224061332|ref|XP_002300430.1| gibberellin 2-oxidase [Populus trichocarpa] gi|222847688|gb|EEE85235.1| gibberellin 2-oxidase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/338 (74%), Positives = 291/338 (86%), Gaps = 15/338 (4%)

Query: 2   VALSTKPAIEQFPYIETCCTTSALFTSTSNSIPLIDLSNPDSKNLLVKACEEFGFFKVIN 61
           + L +KPA+EQF +I     T+       + IPLIDLS PDSK+LLV+ACEEFGFFKVIN
Sbjct: 1   MVLISKPALEQFSFIRNRKPTTVF-----SGIPLIDLSKPDSKHLLVEACEEFGFFKVIN 55

Query: 62  HGVPLESISRLESEAIRFFSLPFSEKEKSGPPSPFGYGNKCIGRNGDVGWVEYLLLNTNQ 121
           HGVP+E IS+LESEA+ FFSLP SEKEK GPPSPFGYGNK IG+NGDVGWVEYLLL TNQ
Sbjct: 56  HGVPMEFISKLESEAVNFFSLPLSEKEKVGPPSPFGYGNKSIGQNGDVGWVEYLLLTTNQ 115

Query: 122 DS-----NSSLGNNPDQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMDEQ 176
           +S     +S  G+NP++FR AL++Y+SAVK+MACEILE+MADGLK+Q RNV SKLLMDEQ
Sbjct: 116 ESISQRFSSVFGDNPEKFRCALNDYVSAVKKMACEILEMMADGLKLQQRNVFSKLLMDEQ 175

Query: 177 SDSVFRLNHYPPRPD----RISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVP 232
           SDSVFRLNHYPP P+       N+IGFGEHTDPQIISVLRSNNTSGLQISL +GSWISVP
Sbjct: 176 SDSVFRLNHYPPCPEIEALTDQNMIGFGEHTDPQIISVLRSNNTSGLQISLSDGSWISVP 235

Query: 233 PDEDSFFINVGDSLQVLTNGRFKSVKHRVLANSLKSRVSMIYFGGPPLSERIAPLPSLMK 292
           PD++SFF+NVGDSLQV+TNGRFKSV+HRVL NS+K+RVSMIYFGGPPLSE+IAPLPSL+K
Sbjct: 236 PDQNSFFVNVGDSLQVMTNGRFKSVRHRVLTNSMKARVSMIYFGGPPLSEKIAPLPSLIK 295

Query: 293 NPEQSLYKEFTWFEYKRSAYNSRLAENRLMHFERIAAS 330
             E SLYKEFTWFEYKRSAY+SRLA+NRL+ FERIAAS
Sbjct: 296 GKE-SLYKEFTWFEYKRSAYSSRLADNRLVLFERIAAS 332

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|340796359|gb|AEK70418.1| GA2ox2 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|224114543|ref|XP_002316789.1| gibberellin 2-oxidase [Populus trichocarpa] gi|222859854|gb|EEE97401.1| gibberellin 2-oxidase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|350285025|gb|AEQ27855.1| GA2-oxidase [Pyrus communis] Back     alignment and taxonomy information
>gi|399936317|gb|AFP58845.1| gibberellin 2-oxidase [Populus tomentosa] Back     alignment and taxonomy information
>gi|255040359|gb|ACT99992.1| gibberellin 2-oxidase [Malus x domestica] Back     alignment and taxonomy information
>gi|51011366|gb|AAT92094.1| GA 2-oxidase 2 [Nerium oleander] Back     alignment and taxonomy information
>gi|449438955|ref|XP_004137253.1| PREDICTED: gibberellin 2-beta-dioxygenase 1-like [Cucumis sativus] gi|449528645|ref|XP_004171314.1| PREDICTED: gibberellin 2-beta-dioxygenase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|340796357|gb|AEK70417.1| GA2ox1 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|225470621|ref|XP_002263961.1| PREDICTED: gibberellin 2-beta-dioxygenase 1 [Vitis vinifera] gi|296086856|emb|CBI33023.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query330
TAIR|locus:2032080329 ATGA2OX1 "Arabidopsis thaliana 0.887 0.890 0.652 1.8e-101
TAIR|locus:2198258341 GA2OX2 "gibberellin 2-oxidase" 0.903 0.873 0.596 9.4e-98
UNIPROTKB|Q8S0S6327 OJ1414_E05.17 "cDNA clone:001- 0.972 0.981 0.564 2e-95
TAIR|locus:505006289335 ATGA2OX3 "gibberellin 2-oxidas 0.890 0.877 0.556 2e-88
TAIR|locus:2204823329 GA2OX6 "gibberellin 2-oxidase 0.927 0.930 0.479 2.5e-72
TAIR|locus:2202587321 GA2OX4 "gibberellin 2-oxidase 0.896 0.922 0.484 2.7e-68
UNIPROTKB|Q5W726382 OSJNBa0017J22.4 "Gibberellin 2 0.390 0.337 0.488 1.3e-61
UNIPROTKB|Q68Y45242 P0022D06.9 "Putative gibberell 0.3 0.409 0.632 1.4e-58
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.806 0.736 0.343 5.3e-40
TAIR|locus:2196623358 GA3OX1 "gibberellin 3-oxidase 0.845 0.779 0.334 1.3e-38
TAIR|locus:2032080 ATGA2OX1 "Arabidopsis thaliana gibberellin 2-oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
 Identities = 199/305 (65%), Positives = 236/305 (77%)

Query:    33 IPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFSEKEKSGP 92
             IP+ID+S+P+SK+ LVKACE+FGFFKVINHGV  E +S LE E + FFSLP SEK +   
Sbjct:    18 IPVIDMSDPESKHALVKACEDFGFFKVINHGVSAELVSVLEHETVDFFSLPKSEKTQVAG 77

Query:    93 PSPFGYGNKCIGRNGDVGWVEYLLLNTNQDSNS-----SLGNNPDQFRFALSEYISAVKR 147
               PFGYGN  IGRNGDVGWVEYLL+N N DS S     SL  +P  FR AL EY ++V++
Sbjct:    78 -YPFGYGNSKIGRNGDVGWVEYLLMNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRK 136

Query:   148 MACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYPPRP------DRISNLIGFGE 201
             M  ++LE + DGL I+PRN LSKL+ D+ +DS+ RLNHYPP P      +   N+IGFGE
Sbjct:   137 MTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGE 196

Query:   202 HTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRV 261
             HTDPQIISVLRSNNTSGLQI+L +GSWISVPPD  SFF NVGDSLQV+TNGRFKSV+HRV
Sbjct:   197 HTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRV 256

Query:   262 LANSLKSRVSMIYFGGPPLSERIAPLPSLMKNPEQSLYKEFTWFEYKRSAYNSRLAENRL 321
             LAN  KSRVSMIYF GP L++RIAPL  L+ N ++ LY+EFTW EYK S YNSRL++NRL
Sbjct:   257 LANCKKSRVSMIYFAGPSLTQRIAPLTCLIDNEDERLYEEFTWSEYKNSTYNSRLSDNRL 316

Query:   322 MHFER 326
               FER
Sbjct:   317 QQFER 321
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0045487 "gibberellin catabolic process" evidence=IDA
GO:0052634 "C-19 gibberellin 2-beta-dioxygenase activity" evidence=IDA
TAIR|locus:2198258 GA2OX2 "gibberellin 2-oxidase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8S0S6 OJ1414_E05.17 "cDNA clone:001-031-D01, full insert sequence" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:505006289 ATGA2OX3 "gibberellin 2-oxidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2204823 GA2OX6 "gibberellin 2-oxidase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202587 GA2OX4 "gibberellin 2-oxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5W726 OSJNBa0017J22.4 "Gibberellin 2-oxidase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q68Y45 P0022D06.9 "Putative gibberellin 2-oxidase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196623 GA3OX1 "gibberellin 3-oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9XG83G2OX_PHACN1, ., 1, 4, ., 1, 1, ., 1, 30.63790.97870.9728N/Ano
Q8LEA2G2OX1_ARATH1, ., 1, 4, ., 1, 1, ., 1, 30.65240.88780.8905yesno
Q9SQ80G2OX1_PEA1, ., 1, 4, ., 1, 1, ., 1, 30.69460.97870.9877N/Ano
Q9XHM5G2OX2_PEA1, ., 1, 4, ., 1, 1, ., 1, 30.51750.88780.8492N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.976
4th Layer1.14.11.7LOW CONFIDENCE prediction!
4th Layer1.14.11.11LOW CONFIDENCE prediction!
3rd Layer1.14.11.130.991
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-137
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-58
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 2e-47
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 7e-47
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 9e-47
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 4e-46
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 5e-46
PLN02704335 PLN02704, PLN02704, flavonol synthase 6e-46
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 1e-45
PLN02216357 PLN02216, PLN02216, protein SRG1 2e-45
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-43
PLN02947374 PLN02947, PLN02947, oxidoreductase 2e-40
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 4e-40
PLN02997325 PLN02997, PLN02997, flavonol synthase 7e-39
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-38
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-32
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 2e-32
PLN02904357 PLN02904, PLN02904, oxidoreductase 9e-32
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-31
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-31
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-30
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 1e-30
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-30
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-25
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-24
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 9e-24
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-17
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 5e-08
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information 
 Score =  391 bits (1005), Expect = e-137
 Identities = 169/300 (56%), Positives = 228/300 (76%), Gaps = 6/300 (2%)

Query: 33  IPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFSEKEKSGP 92
           IP+IDL++ D+K  +VKACEEFGFFKVINHGV  + +++LE EAI FF+LP S K+K+GP
Sbjct: 27  IPVIDLTDSDAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGP 86

Query: 93  PSPFGYGNKCIGRNGDVGWVEYLLLNTN-----QDSNSSLGNNPDQFRFALSEYISAVKR 147
           P PFGYG K IG NGDVGW+EY+LLN N       + +   + P  FR A+ EY+  +KR
Sbjct: 87  PDPFGYGTKRIGPNGDVGWLEYILLNANLCLESHKTTAVFRHTPAIFREAVEEYMKEMKR 146

Query: 148 MACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYPPRPDRISNL-IGFGEHTDPQ 206
           M+ ++LE++ + LKI+P+  LSKL+  ++SDS  R+NHYP + +    + IGFGEHTDPQ
Sbjct: 147 MSSKVLEMVEEELKIEPKEKLSKLVKVKESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQ 206

Query: 207 IISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRVLANSL 266
           +IS+LRSN+T+GLQI +++G+W+ VPPD  SFF+ VGD+LQV+TNGRFKSVKHRV+ N+ 
Sbjct: 207 LISLLRSNDTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTK 266

Query: 267 KSRVSMIYFGGPPLSERIAPLPSLMKNPEQSLYKEFTWFEYKRSAYNSRLAENRLMHFER 326
           +SR+SMIYF GPPLSE+IAPL  L+   +  LY EFTW +YK SAY ++L + RL  FE+
Sbjct: 267 RSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKTKLGDYRLGLFEK 326

Length = 335
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 330
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02997325 flavonol synthase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02904357 oxidoreductase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02704335 flavonol synthase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02485329 oxidoreductase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.9
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.79
PLN03176120 flavanone-3-hydroxylase; Provisional 99.72
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.29
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 95.79
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 93.58
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.34
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 90.36
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information 
Probab=100.00  E-value=1.3e-73  Score=529.28  Aligned_cols=305  Identities=56%  Similarity=0.997  Sum_probs=267.3

Q ss_pred             cccCCccccccCCCCCccEEeCCChhHHHHHHHHhHhccEEEEeccCCCHHHHHHHHHHHHHHhCCCHhhhcccCCCCCC
Q 020152           17 ETCCTTSALFTSTSNSIPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFSEKEKSGPPSPF   96 (330)
Q Consensus        17 ~~~~~~~~~f~~~~~~iPiIDl~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~   96 (330)
                      +-|++...       .||+|||++.++.++|.+||+++|||+|+||||+.++++++++.+++||+||.|+|+++...+..
T Consensus        18 ~~~~~~~~-------~iPvIDls~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~~~~   90 (335)
T PLN02156         18 PKCKPVPV-------LIPVIDLTDSDAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPPDPF   90 (335)
T ss_pred             CcccCCCC-------CCCcccCCChHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCCCCc
Confidence            55666522       69999999877889999999999999999999999999999999999999999999998765667


Q ss_pred             CccccccCCCCCCCceeeecccCCCCC-----CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchHHHHh
Q 020152           97 GYGNKCIGRNGDVGWVEYLLLNTNQDS-----NSSLGNNPDQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKL  171 (330)
Q Consensus        97 GY~~~~~~~~~~~~~~e~~~~~~~~~~-----~~~~p~~~~~fr~~~~~y~~~~~~la~~Ll~~la~~Lgl~~~~~~~~~  171 (330)
                      ||+....+..++.+|.|.+.+...+..     .+.||+.++.||+.+++|+++|.+|+.+||++|+++||++++++|+++
T Consensus        91 Gy~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~wp~~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~f~~~  170 (335)
T PLN02156         91 GYGTKRIGPNGDVGWLEYILLNANLCLESHKTTAVFRHTPAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEKLSKL  170 (335)
T ss_pred             ccCccccCCCCCCCceeeEeeecCCccccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHHHHH
Confidence            996544444455688988876543322     236998889999999999999999999999999999999745789988


Q ss_pred             hcCCCccceeEeeecCCCCCCC-CCcccccCcCCcCceeEEeeCCCCCeeeEecCCCeEEcCCCCCeEEEEechhhHHhh
Q 020152          172 LMDEQSDSVFRLNHYPPRPDRI-SNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLT  250 (330)
Q Consensus       172 ~~~~~~~~~lrl~~Yp~~~~~~-~~~~~~~~HtD~g~lTlL~~d~~~GLqv~~~~g~W~~V~~~~~~~vVnvGd~l~~lT  250 (330)
                      +.+..+.+.||++|||+++... ...+|+++|||+|+||||+||+++||||+.++|+|++|+|.+|++|||+||+||+||
T Consensus       171 ~~~~~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wT  250 (335)
T PLN02156        171 VKVKESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSNDTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMT  250 (335)
T ss_pred             hcCCCccceEeEEeCCCCCCCccccccCCCCccCCCceEEEEeCCCCceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHh
Confidence            7544456899999999998642 356899999999999999999999999987899999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCeEEEEEeeCCCCCCeeecCCCCcCCCCCCCCCccCHHHHHHHHHhchhccccccchhhhh
Q 020152          251 NGRFKSVKHRVLANSLKSRVSMIYFGGPPLSERIAPLPSLMKNPEQSLYKEFTWFEYKRSAYNSRLAENRLMHFERIA  328 (330)
Q Consensus       251 nG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~  328 (330)
                      ||+|+|+.|||+.+...+||||+||++|+.|++|.|+++++++++|++|++++|+||+..+++..+..-++..+++--
T Consensus       251 Ng~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~ey~~~~~~~~~~~~~~~~~~~~~  328 (335)
T PLN02156        251 NGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKTKLGDYRLGLFEKQP  328 (335)
T ss_pred             CCeeeccceeeecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCccCCCccHHHHHHHHHhccCCCccchhhhccC
Confidence            999999999999877788999999999999999999999999889999999999999999999888866677777643

>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-28
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-28
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 6e-27
1w9y_A319 The Structure Of Acc Oxidase Length = 319 2e-26
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 5e-18
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 4e-12
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 8e-04
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 139/280 (49%), Gaps = 24/280 (8%)
Query: 32  SIPLIDLSNPDSKNL---------LVKACEEFGFFKVINHGVPLESISRLESEAIRFFSL 82
            +P IDL N +S +          L KA  ++G   +INHG+P + + R++     FFSL
Sbjct: 46  QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSL 105
Query: 83  PFSEKEKSGPPSPFG----YGNKCIGR-NGDVGWVEYLLLNTNQDSNSSLG---NNPDQF 134
              EKEK       G    YG+K     +G + W +Y       +    L      P  +
Sbjct: 106 SVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDY 165
Query: 135 RFALSEYISAVKRMACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYP--PRPDR 192
             A SEY   ++ +A ++ + ++ GL ++P  +  ++   E+     ++N+YP  P+P+ 
Sbjct: 166 IEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPEL 225
Query: 193 ISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNG 252
               +G   HTD   ++ +  N   GLQ+   EG W++     DS  +++GD+L++L+NG
Sbjct: 226 A---LGVEAHTDVSALTFILHNMVPGLQL-FYEGKWVTAKCVPDSIVMHIGDTLEILSNG 281
Query: 253 RFKSVKHRVLANSLKSRVSMIYFGGPPLSERI-APLPSLM 291
           ++KS+ HR L N  K R+S   F  PP  + +  PLP ++
Sbjct: 282 KYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV 321
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-110
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-91
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-87
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 3e-70
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-69
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-66
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
 Score =  321 bits (824), Expect = e-110
 Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 19/275 (6%)

Query: 32  SIPLIDLSNPDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFSEKEKSG 91
            +  ID    DS    V++  E GF  + NH +  E + R+ +E   FF+     +    
Sbjct: 3   KLETIDYRAADSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNSEAKNEFMFN 62

Query: 92  PPSPFGYGNKCIGRNGDVGWVEYLL--LNTNQDSNSSLGNNPDQFRFALSEYISAVKRMA 149
             +  G+    I        V+ +    +         G  PD  R  +  Y      +A
Sbjct: 63  RETHDGFFPASISETAKGHTVKDIKEYYHVYPW-----GRIPDSLRANILAYYEKANTLA 117

Query: 150 CEILELMADGLKIQPRNVLSKLLMDEQSD---SVFRLNHYPPRP-DRISNLIGFGEHTDP 205
            E+LE +      + +   S  L +  ++   ++ R+ HYPP   D     I    H D 
Sbjct: 118 SELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDI 177

Query: 206 QIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRVL--- 262
            +I+VL + N  GLQ+  ++GSW+ VP D  +  IN+GD LQ  ++G F S  HRV+   
Sbjct: 178 NLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPE 237

Query: 263 -ANSLKSRVSMIYFGGPP----LSERIAPLPSLMK 292
             +  KSR+S+  F  P     LSER      LM+
Sbjct: 238 GTDKTKSRISLPLFLHPHPSVVLSERYTADSYLME 272
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query330
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 94.73
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 91.99
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 90.6
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 83.43
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 81.11
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=3.2e-71  Score=511.24  Aligned_cols=280  Identities=23%  Similarity=0.346  Sum_probs=246.7

Q ss_pred             CCccEEeCCC-----hhHHHHHHHHhHhccEEEEeccCCCHHHHHHHHHHHHHHhCCCHhhhcccCC--CCCCCcccccc
Q 020152           31 NSIPLIDLSN-----PDSKNLLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFSEKEKSGP--PSPFGYGNKCI  103 (330)
Q Consensus        31 ~~iPiIDl~~-----~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~--~~~~GY~~~~~  103 (330)
                      .+||||||++     .+.+++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++..  ...+||.....
T Consensus         5 ~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g~   84 (312)
T 3oox_A            5 SAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFGV   84 (312)
T ss_dssp             CSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCCC
T ss_pred             CCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccccc
Confidence            3799999984     3578999999999999999999999999999999999999999999999863  35678854332


Q ss_pred             C---CCCCCCceeeecccCCCC---------CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchHHHHh
Q 020152          104 G---RNGDVGWVEYLLLNTNQD---------SNSSLGNNPDQFRFALSEYISAVKRMACEILELMADGLKIQPRNVLSKL  171 (330)
Q Consensus       104 ~---~~~~~~~~e~~~~~~~~~---------~~~~~p~~~~~fr~~~~~y~~~~~~la~~Ll~~la~~Lgl~~~~~~~~~  171 (330)
                      .   .....||+|++.++....         ..+.||+.+|+||+.+++|+++|.+++.+||++|+++||++ +++|.++
T Consensus        85 e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f~~~  163 (312)
T 3oox_A           85 ETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE-RDFFKPT  163 (312)
T ss_dssp             CCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TTTTHHH
T ss_pred             eecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-HHHHHHH
Confidence            2   224578899888754211         12369998999999999999999999999999999999998 8899988


Q ss_pred             hcCCCccceeEeeecCCCCCCCCCcccccCcCCcCceeEEeeCCCCCeeeEecCCCeEEcCCCCCeEEEEechhhHHhhc
Q 020152          172 LMDEQSDSVFRLNHYPPRPDRISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTN  251 (330)
Q Consensus       172 ~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~~HtD~g~lTlL~~d~~~GLqv~~~~g~W~~V~~~~~~~vVnvGd~l~~lTn  251 (330)
                      +.  .+.+.||++||||++.+.. .+|+++|||+|+||||+||+++||||++++|+|++|+|.+|++|||+||+||+|||
T Consensus       164 ~~--~~~~~lr~~~Ypp~~~~~~-~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tn  240 (312)
T 3oox_A          164 VQ--DGNSVLRLLHYPPIPKDAT-GVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTN  240 (312)
T ss_dssp             HT--TCCCEEEEEEECCCSSCCC---CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTT
T ss_pred             hc--CCcceeeeEecCCCCCCcC-CcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhC
Confidence            84  4568999999999987643 39999999999999999999999999988999999999999999999999999999


Q ss_pred             CcccccccccccCC----CCCeEEEEEeeCCCCCCeeecCCCCcCCCCCCCCC-ccCHHHHHHHHHhc
Q 020152          252 GRFKSVKHRVLANS----LKSRVSMIYFGGPPLSERIAPLPSLMKNPEQSLYK-EFTWFEYKRSAYNS  314 (330)
Q Consensus       252 G~~~s~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~~~-~~~~~e~~~~~~~~  314 (330)
                      |+|+|+.|||+.+.    ..+|||++||++|+.|++|.|+++|+++++|++|+ +++++||+..+++.
T Consensus       241 G~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~  308 (312)
T 3oox_A          241 NVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE  308 (312)
T ss_dssp             TSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred             CeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence            99999999998753    56799999999999999999999999988999999 99999999999874
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 330
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 3e-61
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-56
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 2e-48
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 7e-36
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

 Score =  195 bits (497), Expect = 3e-61
 Identities = 73/303 (24%), Positives = 146/303 (48%), Gaps = 12/303 (3%)

Query: 32  SIPLIDLSNPDSKN------LLVKACEEFGFFKVINHGVPLESISRLESEAIRFFSLPFS 85
           + P+I L   +         ++  ACE +GFF+++NHG+P E +  +E      +     
Sbjct: 2   NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCME 61

Query: 86  EKEKSGPPSPFGYGNKCIGRNGDVGWVEYLLLNTNQDSNSSLGNNPDQFRFALSEYISAV 145
           ++ K    S    G +    + D     +L      + +  + +  +++R  + ++   +
Sbjct: 62  QRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISE-VPDLDEEYREVMRDFAKRL 120

Query: 146 KRMACEILELMADGLKIQPRNVLSKLLMDEQSDSVFRLNHYPPRPDRISNLIGFGEHTDP 205
           +++A E+L+L+ + L ++   + +     +  +   ++++YPP P     + G   HTD 
Sbjct: 121 EKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKP-DLIKGLRAHTDA 179

Query: 206 QIISVLRSNNTSGLQISLREGSWISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRVLANS 265
             I +L  ++       L++G WI VPP   S  +N+GD L+V+TNG++KSV HRV+A  
Sbjct: 180 GGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQK 239

Query: 266 LKSRVSMIYFGGPPLSERIAPLPSLMKNP---EQSLYKEFTWFEYKRSAYNSRLAENRLM 322
             +R+S+  F  P     I P P+L++      + +Y +F + +Y +  Y     + +  
Sbjct: 240 DGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMK-LYAGLKFQAKEP 298

Query: 323 HFE 325
            FE
Sbjct: 299 RFE 301
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query330
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 90.91
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.8e-68  Score=495.59  Aligned_cols=300  Identities=27%  Similarity=0.456  Sum_probs=251.5

Q ss_pred             cccccccccCCcc-----ccccCCCCCccEEeCCC---------hhHHHHHHHHhHhccEEEEeccCCCHHHHHHHHHHH
Q 020152           11 EQFPYIETCCTTS-----ALFTSTSNSIPLIDLSN---------PDSKNLLVKACEEFGFFKVINHGVPLESISRLESEA   76 (330)
Q Consensus        11 ~~~~~p~~~~~~~-----~~f~~~~~~iPiIDl~~---------~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~   76 (330)
                      ++|+.|++.+|..     .....+..+||||||+.         ...+++|.+||+++|||||+||||+.++++++++++
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~   98 (349)
T d1gp6a_          19 KEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAG   98 (349)
T ss_dssp             GGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHH
T ss_pred             HhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHH
Confidence            5678888887774     22335566899999984         236789999999999999999999999999999999


Q ss_pred             HHHhCCCHhhhcccCCCC----CCCcccccc-CCCCCCCceeeecccCCC---CCCCCCCCCchHHHHHHHHHHHHHHHH
Q 020152           77 IRFFSLPFSEKEKSGPPS----PFGYGNKCI-GRNGDVGWVEYLLLNTNQ---DSNSSLGNNPDQFRFALSEYISAVKRM  148 (330)
Q Consensus        77 ~~fF~lp~e~K~~~~~~~----~~GY~~~~~-~~~~~~~~~e~~~~~~~~---~~~~~~p~~~~~fr~~~~~y~~~~~~l  148 (330)
                      ++||+||.|+|+++....    ..||+.... ...+..++.++......+   ...+.||+.++.|++.+.+|+++|.++
T Consensus        99 ~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~~f~e~~~~~~~~~~~l  178 (349)
T d1gp6a_          99 EEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLL  178 (349)
T ss_dssp             HHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccchHHHHHHHHHHHHHHH
Confidence            999999999999996422    223333222 223444555443221111   112369999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCchHHHHhhcC-CCccceeEeeecCCCCCCCCCcccccCcCCcCceeEEeeCCCCCeeeEecCCC
Q 020152          149 ACEILELMADGLKIQPRNVLSKLLMD-EQSDSVFRLNHYPPRPDRISNLIGFGEHTDPQIISVLRSNNTSGLQISLREGS  227 (330)
Q Consensus       149 a~~Ll~~la~~Lgl~~~~~~~~~~~~-~~~~~~lrl~~Yp~~~~~~~~~~~~~~HtD~g~lTlL~~d~~~GLqv~~~~g~  227 (330)
                      +.+|+++++++||++ +++|.+.+.. ....+.||++|||+++... ..+|+++|||+|+||||+|+.++||||+ .+|+
T Consensus       179 a~~ll~~la~~Lgl~-~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~-~~~g~~~HtD~g~lTlL~q~~~~GLqv~-~~g~  255 (349)
T d1gp6a_         179 ATKVFKALSVGLGLE-PDRLEKEVGGLEELLLQMKINYYPKCPQPE-LALGVEAHTDVSALTFILHNMVPGLQLF-YEGK  255 (349)
T ss_dssp             HHHHHHHHHHHTTSC-TTHHHHHTTHHHHCEEEEEEEEECCCSSTT-TCCSEEEECCCSSEEEEEECSCCCEEEE-ETTE
T ss_pred             HHhhhHHHHHHcCCC-HHHHHHHhccccccceeeeecccccccchh-hccccccCCCCcceEEEeccCCcceeee-cCCc
Confidence            999999999999998 7888877542 3456789999999987764 6789999999999999999999999997 5899


Q ss_pred             eEEcCCCCCeEEEEechhhHHhhcCcccccccccccCCCCCeEEEEEeeCCCCCCee-ecCCCCcCCCCCCCCCccCHHH
Q 020152          228 WISVPPDEDSFFINVGDSLQVLTNGRFKSVKHRVLANSLKSRVSMIYFGGPPLSERI-APLPSLMKNPEQSLYKEFTWFE  306 (330)
Q Consensus       228 W~~V~~~~~~~vVnvGd~l~~lTnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~~i-~pl~~~~~~~~p~~~~~~~~~e  306 (330)
                      |++|+|.+|++|||+||+||+||||+|+|+.|||+.+++.+||||+||++|+.|++| .|+++|++.++|++|+|+|++|
T Consensus       256 W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y~~~t~~e  335 (349)
T d1gp6a_         256 WVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQ  335 (349)
T ss_dssp             EEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHH
T ss_pred             eEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCCCCCCCCCCccHHH
Confidence            999999999999999999999999999999999999888899999999999999865 8999999999999999999999


Q ss_pred             HHHHHHh
Q 020152          307 YKRSAYN  313 (330)
Q Consensus       307 ~~~~~~~  313 (330)
                      |++.++.
T Consensus       336 ~~~~rl~  342 (349)
T d1gp6a_         336 HIEHKLF  342 (349)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999874
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure