Citrus Sinensis ID: 020168

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDGPSAGAGSGAGPKIEEVD
ccHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccccccccccccccccccccccEEEEEccccccccEEEEEEEcccccccccccccccccccccccccccccEEEEEEEccccEEEEEEEEcccccccEEEEEcccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccc
cHHHHHHHHHHcccHHHccEEEEEcHHHHcHHHHHHHHHHccccccEcccccccHHHHHHHHHHHHccccccHHHHHcccccEccccEEEEEcccEEEEEEccccEccEEEEEEEEEccccccEEEEEEEEccccEHHHcEEEEEEEEEcccccccccccEEEEEEEcccccEEEEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcHHHHHHHHcccccccccccccccccccccccccEEEEcc
MEPVEKCLRdakmdkssvHDVVLVGGSTRIPKVQQLLQDFFngkelcksinpdeAVAYGAAVQAAILSGEGNEKVQDLLLldvtplslgletaggvmtvliprnttiptkkeqvfstysdnqpgvliqvyegertrtrdnnllgkfelsgippaprgvpqinvcfdidangilnvsaedkttgqknkititndkgrlSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNtikdekisaklptadKKKIEDAIEEAIQWldgnqlaeaDEFEDKMKELEGICNPIIAKmyqgggadagasmdedgpsagagsgagpkieevd
MEPVEKCLrdakmdkssvhDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEqvfstysdnqpgvLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNvsaedkttgqknkititndkgrlskeEIEKMVQEAEkykaeddehkkkveaknalenyaynmrntikdekisaklptadKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDGPsagagsgagpkieevd
MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEavaygaavqaaILSGEGNEKVQDlllldvtplslglETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDgpsagagsgagpKIEEVD
*****************VHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVS*******************************************************YAY************************DAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ*******************************
*EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK**GQK**ITITNDKGRLSKEEIEKMVQEAEKYKAEDD*****VEAKNALENYAYNMRNTIK*************KKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPI***********************************V*
MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQE************KKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG****************************
MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG*****************************
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MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEExxxxxxxxxxxxxxxxxxxxxVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDGPSAGAGSGAGPKIEEVD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query330 2.2.26 [Sep-21-2011]
P09189651 Heat shock cognate 70 kDa N/A no 0.993 0.503 0.907 1e-175
P22953651 Probable mediator of RNA yes no 0.993 0.503 0.892 1e-171
Q9LHA8650 Probable mediator of RNA no no 0.996 0.506 0.909 1e-170
P29357653 Chloroplast envelope memb N/A no 0.987 0.499 0.908 1e-170
P27322644 Heat shock cognate 70 kDa N/A no 0.984 0.504 0.912 1e-169
P24629650 Heat shock cognate 70 kDa N/A no 0.996 0.506 0.885 1e-169
P22954653 Probable mediator of RNA no no 0.996 0.503 0.874 1e-168
O65719649 Heat shock 70 kDa protein no no 0.990 0.503 0.882 1e-164
P11143645 Heat shock 70 kDa protein N/A no 0.987 0.505 0.888 1e-163
P26413645 Heat shock 70 kDa protein no no 0.987 0.505 0.848 1e-162
>sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1 Back     alignment and function desciption
 Score =  612 bits (1579), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 303/334 (90%), Positives = 317/334 (94%), Gaps = 6/334 (1%)

Query: 1   MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGA 60
           MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGA
Sbjct: 320 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGA 379

Query: 61  AVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
           AVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG MTVLIPRNTTIPTKKEQVFSTYSD
Sbjct: 380 AVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGGMTVLIPRNTTIPTKKEQVFSTYSD 439

Query: 121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
           NQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDK
Sbjct: 440 NQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDK 499

Query: 181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI 240
           TTGQKNKITITNDKGRLSKEEIE+MVQEAEKYK+ED+E KKKVEAKNALENYAYNMRNTI
Sbjct: 500 TTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTI 559

Query: 241 KDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG 300
           KD+KI+++L  ADKK+IEDAI+EAI+WLD NQLAEADEFEDKMKELE ICNPIIAKMYQG
Sbjct: 560 KDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAKMYQG 619

Query: 301 GGADAGASMDEDGP----SAGAGSGAGPKIEEVD 330
           G    GA+MDEDGP    SAG+ +GAGPKIEEVD
Sbjct: 620 GA--GGATMDEDGPSVGGSAGSQTGAGPKIEEVD 651

Petunia hybrida (taxid: 4102)
>sp|P22953|MD37E_ARATH Probable mediator of RNA polymerase II transcription subunit 37e OS=Arabidopsis thaliana GN=MED37E PE=1 SV=3 Back     alignment and function description
>sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c OS=Arabidopsis thaliana GN=MED37C PE=1 SV=1 Back     alignment and function description
>sp|P29357|HSP7E_SPIOL Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3 Back     alignment and function description
>sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1 Back     alignment and function description
>sp|P24629|HSP71_SOLLC Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1 Back     alignment and function description
>sp|P22954|MD37D_ARATH Probable mediator of RNA polymerase II transcription subunit 37c OS=Arabidopsis thaliana GN=MED37D PE=1 SV=2 Back     alignment and function description
>sp|O65719|HSP7C_ARATH Heat shock 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSP70-3 PE=1 SV=1 Back     alignment and function description
>sp|P11143|HSP70_MAIZE Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2 Back     alignment and function description
>sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query330
108864706 544 Heat shock cognate 70 kDa protein, putat 1.0 0.606 0.930 1e-179
108864705 602 Heat shock cognate 70 kDa protein, putat 1.0 0.548 0.930 1e-179
115486793 649 Os11g0703900 [Oryza sativa Japonica Grou 1.0 0.508 0.930 1e-179
125578088 632 hypothetical protein OsJ_34853 [Oryza sa 1.0 0.522 0.930 1e-179
211906496 648 heat shock protein 70 [Gossypium hirsutu 0.996 0.507 0.936 1e-178
356542451 560 PREDICTED: heat shock cognate 70 kDa pro 1.0 0.589 0.945 1e-178
356539018 649 PREDICTED: heat shock cognate 70 kDa pro 1.0 0.508 0.942 1e-178
21664287 648 heat shock protein 70 [Oryza sativa Indi 1.0 0.509 0.927 1e-178
224098390 648 predicted protein [Populus trichocarpa] 0.996 0.507 0.930 1e-177
45331281 649 70 kDa heat shock cognate protein 1 [Vig 1.0 0.508 0.936 1e-177
>gi|108864706|gb|ABG22609.1| Heat shock cognate 70 kDa protein, putative, expressed [Oryza sativa Japonica Group] Back     alignment and taxonomy information
 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 307/330 (93%), Positives = 317/330 (96%)

Query: 1   MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGA 60
           MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIP+VQQLLQDFFNGKELCK+INPDEAVAYGA
Sbjct: 215 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPRVQQLLQDFFNGKELCKNINPDEAVAYGA 274

Query: 61  AVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
           AVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSD
Sbjct: 275 AVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 334

Query: 121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
           NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDK
Sbjct: 335 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDK 394

Query: 181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI 240
           TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYK+ED+EHKKKVE+KNALENYAYNMRNTI
Sbjct: 395 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNTI 454

Query: 241 KDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG 300
           KDEKI++KLP ADKKKIEDAI++AIQWLDGNQLAEADEF+DKMKELEGICNPIIAKMYQG
Sbjct: 455 KDEKIASKLPAADKKKIEDAIDQAIQWLDGNQLAEADEFDDKMKELEGICNPIIAKMYQG 514

Query: 301 GGADAGASMDEDGPSAGAGSGAGPKIEEVD 330
            GAD    MDED      GSGAGPKIEEVD
Sbjct: 515 AGADMAGGMDEDDAPPAGGSGAGPKIEEVD 544

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|108864705|gb|ABG22608.1| Heat shock cognate 70 kDa protein, putative, expressed [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|115486793|ref|NP_001068540.1| Os11g0703900 [Oryza sativa Japonica Group] gi|62733235|gb|AAX95352.1| dnaK-type molecular chaperone hsp70 - rice (fragment) [Oryza sativa Japonica Group] gi|77552703|gb|ABA95500.1| Heat shock cognate 70 kDa protein, putative, expressed [Oryza sativa Japonica Group] gi|113645762|dbj|BAF28903.1| Os11g0703900 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|125578088|gb|EAZ19310.1| hypothetical protein OsJ_34853 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|211906496|gb|ACJ11741.1| heat shock protein 70 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|356542451|ref|XP_003539680.1| PREDICTED: heat shock cognate 70 kDa protein-like [Glycine max] gi|345646046|gb|AEO13403.1| heat shock 70 [Glycine max] Back     alignment and taxonomy information
>gi|356539018|ref|XP_003537997.1| PREDICTED: heat shock cognate 70 kDa protein-like [Glycine max] Back     alignment and taxonomy information
>gi|21664287|emb|CAA47948.2| heat shock protein 70 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|224098390|ref|XP_002311161.1| predicted protein [Populus trichocarpa] gi|222850981|gb|EEE88528.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|45331281|gb|AAS57912.1| 70 kDa heat shock cognate protein 1 [Vigna radiata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query330
TAIR|locus:2101222650 HSP70 "heat shock protein 70" 0.996 0.506 0.819 4.3e-141
TAIR|locus:2181833651 HSC70-1 "heat shock cognate pr 0.993 0.503 0.820 3.9e-140
TAIR|locus:2181818653 Hsp70-2 [Arabidopsis thaliana 0.996 0.503 0.8 2.4e-138
TAIR|locus:2074984649 AT3G09440 [Arabidopsis thalian 0.993 0.505 0.795 1.2e-134
TAIR|locus:2200462646 Hsp70b "heat shock protein 70B 0.993 0.507 0.754 1.9e-129
TAIR|locus:2010713617 ERD2 "EARLY-RESPONSIVE TO DEHY 0.903 0.482 0.756 1.8e-117
DICTYBASE|DDB_G0269144640 hspB "heat shock cognate prote 0.996 0.514 0.630 1.3e-109
UNIPROTKB|Q27965641 HSPA1B "Heat shock 70 kDa prot 0.927 0.477 0.677 1.3e-109
UNIPROTKB|Q27975641 HSPA1A "Heat shock 70 kDa prot 0.927 0.477 0.677 1.3e-109
UNIPROTKB|F1NRW7647 HSPA8 "Heat shock cognate 71 k 0.927 0.472 0.676 3.4e-109
TAIR|locus:2101222 HSP70 "heat shock protein 70" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
 Identities = 272/332 (81%), Positives = 285/332 (85%)

Query:     1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
             MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDE      
Sbjct:   320 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGA 379

Query:    61 XXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
                  ILSGEGNEKVQD             ETAGGVMTVLIPRNTTIPTKKEQ+FSTYSD
Sbjct:   380 AVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSD 439

Query:   121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
             NQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDK
Sbjct:   440 NQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDK 499

Query:   181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI 240
             TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAED+EHKKKV+AKNALENYAYNMRNTI
Sbjct:   500 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTI 559

Query:   241 KDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG 300
             KDEKI++KL  ADKKKIEDAI++AI+WLDGNQLAEADEFEDKMKELE +CNPIIA+MYQG
Sbjct:   560 KDEKIASKLDAADKKKIEDAIDQAIEWLDGNQLAEADEFEDKMKELESLCNPIIARMYQG 619

Query:   301 GGADAGAS--MDEDXXXXXXXXXXXXKIEEVD 330
              G D G +  MD+D            KIEEVD
Sbjct:   620 AGPDMGGAGGMDDDTPAGGSGGAGP-KIEEVD 650
GO:0005524 "ATP binding" evidence=IEA;IDA
GO:0005829 "cytosol" evidence=IDA;TAS
GO:0006457 "protein folding" evidence=RCA;TAS
GO:0009408 "response to heat" evidence=IEP;RCA
GO:0009615 "response to virus" evidence=IEP
GO:0005618 "cell wall" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0009644 "response to high light intensity" evidence=IEP;RCA
GO:0042542 "response to hydrogen peroxide" evidence=IEP;RCA
GO:0005739 "mitochondrion" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009617 "response to bacterium" evidence=IEP
GO:0016567 "protein ubiquitination" evidence=IMP
GO:0031625 "ubiquitin protein ligase binding" evidence=IPI
GO:0009266 "response to temperature stimulus" evidence=IEP
GO:0048046 "apoplast" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
TAIR|locus:2181833 HSC70-1 "heat shock cognate protein 70-1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2181818 Hsp70-2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074984 AT3G09440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200462 Hsp70b "heat shock protein 70B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010713 ERD2 "EARLY-RESPONSIVE TO DEHYDRATION 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269144 hspB "heat shock cognate protein Hsc70-1" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q27965 HSPA1B "Heat shock 70 kDa protein 1B" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q27975 HSPA1A "Heat shock 70 kDa protein 1A" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NRW7 HSPA8 "Heat shock cognate 71 kDa protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O73885HSP7C_CHICKNo assigned EC number0.75250.90600.4628yesno
P0CB32HS71L_BOVINNo assigned EC number0.70440.97270.5007yesno
P63018HSP7C_RATNo assigned EC number0.76250.90600.4628yesno
P16627HS71L_MOUSENo assigned EC number0.70140.97270.5007yesno
P29357HSP7E_SPIOLNo assigned EC number0.90850.98780.4992N/Ano
P22953MD37E_ARATHNo assigned EC number0.89220.99390.5038yesno
P09446HSP7A_CAEELNo assigned EC number0.75250.90600.4671yesno
P27322HSP72_SOLLCNo assigned EC number0.91210.98480.5046N/Ano
P36415HS7C1_DICDINo assigned EC number0.74580.90600.4671yesno
P09189HSP7C_PETHYNo assigned EC number0.90710.99390.5038N/Ano
A5A8V7HS71L_PIGNo assigned EC number0.70740.97270.5007yesno
P11142HSP7C_HUMANNo assigned EC number0.76250.90600.4628yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
PTZ00009653 PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro 0.0
pfam00012598 pfam00012, HSP70, Hsp70 protein 1e-154
PRK00290627 PRK00290, dnaK, molecular chaperone DnaK; Provisio 1e-144
TIGR02350595 TIGR02350, prok_dnaK, chaperone protein DnaK 1e-127
PRK13411653 PRK13411, PRK13411, molecular chaperone DnaK; Prov 1e-108
CHL00094621 CHL00094, dnaK, heat shock protein 70 1e-107
COG0443579 COG0443, DnaK, Molecular chaperone [Posttranslatio 1e-107
PTZ00400663 PTZ00400, PTZ00400, DnaK-type molecular chaperone; 1e-105
PRK13410668 PRK13410, PRK13410, molecular chaperone DnaK; Prov 4e-98
PLN03184673 PLN03184, PLN03184, chloroplast Hsp70; Provisional 1e-96
TIGR01991599 TIGR01991, HscA, Fe-S protein assembly chaperone H 9e-80
PRK05183616 PRK05183, hscA, chaperone protein HscA; Provisiona 1e-78
PTZ00186657 PTZ00186, PTZ00186, heat shock 70 kDa precursor pr 8e-73
cd10233376 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding 2e-46
PRK01433595 PRK01433, hscA, chaperone protein HscA; Provisiona 5e-46
cd10241374 cd10241, HSPA5-like_NBD, Nucleotide-binding domain 2e-33
cd10234376 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d 2e-24
cd10170369 cd10170, HSP70_NBD, Nucleotide-binding domain of t 3e-23
cd11733377 cd11733, HSPA9-like_NBD, Nucleotide-binding domain 8e-21
cd10228381 cd10228, HSPA4_like_NDB, Nucleotide-binding domain 3e-20
cd10238375 cd10238, HSPA14-like_NBD, Nucleotide-binding domai 2e-19
cd10235339 cd10235, HscC_like_NBD, Nucleotide-binding domain 3e-19
cd11734373 cd11734, Ssq1_like_NBD, Nucleotide-binding domain 3e-19
cd10236355 cd10236, HscA_like_NBD, Nucleotide-binding domain 4e-18
cd10237417 cd10237, HSPA13-like_NBD, Nucleotide-binding domai 5e-17
cd10230388 cd10230, HYOU1-like_NBD, Nucleotide-binding domain 2e-15
cd11732377 cd11732, HSP105-110_like_NBD, Nucleotide-binding d 4e-12
cd11737383 cd11737, HSPA4_NBD, Nucleotide-binding domain of H 5e-12
cd11738383 cd11738, HSPA4L_NBD, Nucleotide-binding domain of 2e-09
cd11739383 cd11739, HSPH1_NBD, Nucleotide-binding domain of H 1e-08
cd10232386 cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma 3e-08
TIGR01312481 TIGR01312, XylB, D-xylulose kinase 2e-06
cd07809487 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1e-04
cd10231415 cd10231, YegD_like, Escherichia coli YegD, a putat 0.002
>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional Back     alignment and domain information 
 Score =  558 bits (1439), Expect = 0.0
 Identities = 240/338 (71%), Positives = 281/338 (83%), Gaps = 8/338 (2%)

Query: 1   MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGA 60
           ++PVEK L+DA MDK SVH+VVLVGGSTRIPKVQ L++DFFNGKE CKSINPDEAVAYGA
Sbjct: 316 LQPVEKVLKDAGMDKRSVHEVVLVGGSTRIPKVQSLIKDFFNGKEPCKSINPDEAVAYGA 375

Query: 61  AVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
           AVQAAIL+GE + +VQDLLLLDVTPLSLGLETAGGVMT LI RNTTIPTKK Q+F+TY+D
Sbjct: 376 AVQAAILTGEQSSQVQDLLLLDVTPLSLGLETAGGVMTKLIERNTTIPTKKSQIFTTYAD 435

Query: 121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
           NQPGVLIQV+EGER  T+DNNLLGKF L GIPPAPRGVPQI V FDIDANGILNVSAEDK
Sbjct: 436 NQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQIEVTFDIDANGILNVSAEDK 495

Query: 181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI 240
           +TG+ NKITITNDKGRLSK +I++MV EAEKYKAED+ ++++VEAKN LENY Y+M+NT+
Sbjct: 496 STGKSNKITITNDKGRLSKADIDRMVNEAEKYKAEDEANRERVEAKNGLENYCYSMKNTL 555

Query: 241 KDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG 300
           +DEK+  KL  +DK  IE AI+EA++WL+ NQLAE +EFE K KE+E +CNPI+ KMYQ 
Sbjct: 556 QDEKVKGKLSDSDKATIEKAIDEALEWLEKNQLAEKEEFEHKQKEVESVCNPIMTKMYQA 615

Query: 301 -GGADAGA-------SMDEDGPSAGAGSGAGPKIEEVD 330
            GG   G         M      AGAG+ +GP +EEVD
Sbjct: 616 AGGGMPGGMPGGMPGGMPGGAGPAGAGASSGPTVEEVD 653

Length = 653
>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein Back     alignment and domain information
>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK Back     alignment and domain information
>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70 Back     alignment and domain information
>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional Back     alignment and domain information
>gnl|CDD|233673 TIGR01991, HscA, Fe-S protein assembly chaperone HscA Back     alignment and domain information
>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins Back     alignment and domain information
>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins Back     alignment and domain information
>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins Back     alignment and domain information
>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family Back     alignment and domain information
>gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins Back     alignment and domain information
>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins Back     alignment and domain information
>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins Back     alignment and domain information
>gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins Back     alignment and domain information
>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins Back     alignment and domain information
>gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and similar proteins Back     alignment and domain information
>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins Back     alignment and domain information
>gnl|CDD|212672 cd10230, HYOU1-like_NBD, Nucleotide-binding domain of human HYOU1 and similar proteins Back     alignment and domain information
>gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins Back     alignment and domain information
>gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4 Back     alignment and domain information
>gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L Back     alignment and domain information
>gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1 Back     alignment and domain information
>gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins Back     alignment and domain information
>gnl|CDD|233354 TIGR01312, XylB, D-xylulose kinase Back     alignment and domain information
>gnl|CDD|198375 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|212673 cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 330
KOG0100663 consensus Molecular chaperones GRP78/BiP/KAR2, HSP 100.0
PTZ00009653 heat shock 70 kDa protein; Provisional 100.0
PLN03184673 chloroplast Hsp70; Provisional 100.0
PRK13411653 molecular chaperone DnaK; Provisional 100.0
PRK00290627 dnaK molecular chaperone DnaK; Provisional 100.0
PRK13410668 molecular chaperone DnaK; Provisional 100.0
KOG0101620 consensus Molecular chaperones HSP70/HSC70, HSP70 100.0
PTZ00400663 DnaK-type molecular chaperone; Provisional 100.0
CHL00094621 dnaK heat shock protein 70 100.0
TIGR02350595 prok_dnaK chaperone protein DnaK. Members of this 100.0
PTZ00186657 heat shock 70 kDa precursor protein; Provisional 100.0
TIGR01991599 HscA Fe-S protein assembly chaperone HscA. The Hea 100.0
PRK05183616 hscA chaperone protein HscA; Provisional 100.0
PRK01433595 hscA chaperone protein HscA; Provisional 100.0
PF00012602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 100.0
KOG0103727 consensus Molecular chaperones HSP105/HSP110/SSE1, 100.0
KOG0102640 consensus Molecular chaperones mortalin/PBP74/GRP7 100.0
COG0443579 DnaK Molecular chaperone [Posttranslational modifi 100.0
KOG0104 902 consensus Molecular chaperones GRP170/SIL1, HSP70 100.0
PRK11678450 putative chaperone; Provisional 98.84
PRK13928336 rod shape-determining protein Mbl; Provisional 98.84
PRK13927334 rod shape-determining protein MreB; Provisional 98.53
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 98.46
PRK13929335 rod-share determining protein MreBH; Provisional 98.39
PRK13930335 rod shape-determining protein MreB; Provisional 98.34
PRK15080267 ethanolamine utilization protein EutJ; Provisional 98.28
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 98.14
PRK09472420 ftsA cell division protein FtsA; Reviewed 97.83
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 97.66
PF02782198 FGGY_C: FGGY family of carbohydrate kinases, C-ter 96.57
PLN02669556 xylulokinase 96.19
PRK15027484 xylulokinase; Provisional 96.15
KOG2531545 consensus Sugar (pentulose and hexulose) kinases [ 95.93
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 95.77
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 95.5
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 95.45
PRK04123548 ribulokinase; Provisional 95.41
TIGR01234536 L-ribulokinase L-ribulokinase. This enzyme catalyz 95.39
PRK00047498 glpK glycerol kinase; Provisional 95.29
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 95.26
PLN02295512 glycerol kinase 95.25
TIGR01312481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 95.21
TIGR01311493 glycerol_kin glycerol kinase. This model describes 95.07
TIGR01315541 5C_CHO_kinase FGGY-family pentulose kinase. This m 94.95
PRK13917344 plasmid segregation protein ParM; Provisional 94.9
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 94.82
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 94.79
PTZ00294504 glycerol kinase-like protein; Provisional 94.76
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 94.75
TIGR01314505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 94.58
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 94.55
PRK10331470 L-fuculokinase; Provisional 94.34
TIGR02627454 rhamnulo_kin rhamnulokinase. This model describes 94.2
PRK13317277 pantothenate kinase; Provisional 93.87
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 93.87
PRK10640471 rhaB rhamnulokinase; Provisional 93.66
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 92.67
KOG2517516 consensus Ribulose kinase and related carbohydrate 92.17
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 92.02
COG1069544 AraB Ribulose kinase [Energy production and conver 91.81
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 90.82
COG1070502 XylB Sugar (pentulose and hexulose) kinases [Carbo 89.85
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 89.64
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 89.29
COG1077342 MreB Actin-like ATPase involved in cell morphogene 89.0
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 88.57
TIGR03281326 methan_mark_12 putative methanogenesis marker prot 80.05
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.2e-64  Score=454.72  Aligned_cols=301  Identities=67%  Similarity=1.052  Sum_probs=292.7

Q ss_pred             CcHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHHHhCCCCccccCCchhhHHhHHHHHHHHHhCCCCccccccee
Q 020168            1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLL   80 (330)
Q Consensus         1 i~~i~~~l~~a~l~~~dI~~V~lvGGsSriP~V~~~l~~~f~~~~~~~~ln~deaVA~GAa~~a~~~s~~~~~~~~~~~~   80 (330)
                      |.|++++|++++|+++|||.|+|||||||||.||+.|+++|+|+++++.+|||||||+|||.+|..+||.  ....++++
T Consensus       346 lkPv~kvl~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsGe--e~t~divL  423 (663)
T KOG0100|consen  346 LKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGE--EDTGDIVL  423 (663)
T ss_pred             hHHHHHHHhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhcccccc--cCcCcEEE
Confidence            5799999999999999999999999999999999999999999999999999999999999999999954  56789999


Q ss_pred             eeccceeeEEEEecceeEEEeeCCCCCCceeEEEEeecCCCCCeEEEEEeeccccccCCCceeeEEEecCCCCCCCCCCe
Q 020168           81 LDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQ  160 (330)
Q Consensus        81 ~d~~~~~igi~~~~~~~~~l~~~g~~lP~~~~~~~~~~~d~q~~i~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~~  160 (330)
                      .|++|.++||+..+|.+..|||+++.+|++++..|++..|+|+.+.|.+|+|++.+..+|+.+|.|.++|+|++|+|.++
T Consensus       424 LDv~pLtlGIETvGGVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpq  503 (663)
T KOG0100|consen  424 LDVNPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQ  503 (663)
T ss_pred             EeeccccceeeeecceeeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeeCCccEEEEEEeccCCcceeeeeccCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHHh
Q 020168          161 INVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI  240 (330)
Q Consensus       161 i~v~~~~d~~G~l~v~~~~~~t~~~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~i~~~r~~l  240 (330)
                      |+|+|.+|.||+|+|++.++.+|++..++|+++.++|+.++|++|....++|..+|+..+++.++||.||+|.|.++..+
T Consensus       504 IEVtFevDangiL~VsAeDKgtg~~~kitItNd~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~YayslKnqi  583 (663)
T KOG0100|consen  504 IEVTFEVDANGILQVSAEDKGTGKKEKITITNDKGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESYAYSLKNQI  583 (663)
T ss_pred             EEEEEEEccCceEEEEeeccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hh-hhhhccCChhhHHHHHHHHHHHHHHHccCCccchHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 020168          241 KD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGA  303 (330)
Q Consensus       241 ~~-~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~~~a~~ee~~~kl~~L~~~~~~i~~R~~e~~~~  303 (330)
                      .+ +.+...+++++++.+..+++++.+||+++++|+.++|.++.++|+..+.||..+++..+|+
T Consensus       584 ~dkekLg~Kl~~edKe~~e~av~e~~eWL~~n~~a~~Ee~~ek~kele~vv~PiisklY~~ag~  647 (663)
T KOG0100|consen  584 GDKEKLGGKLSDEDKETIEDAVEEALEWLESNQDASKEEFKEKKKELEAVVQPIISKLYGGAGG  647 (663)
T ss_pred             CchhHhcccCChhHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence            87 7788999999999999999999999999999999999999999999999999999996644

>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>TIGR02627 rhamnulo_kin rhamnulokinase Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>PRK10640 rhaB rhamnulokinase; Provisional Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>COG1069 AraB Ribulose kinase [Energy production and conversion] Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
1yuw_A554 Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214 2e-99
3c7n_B554 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 3e-99
2v7z_A543 Crystal Structure Of The 70-Kda Heat Shock Cognate 6e-95
1ckr_A159 High Resolution Solution Structure Of The Heat Shoc 2e-64
2kho_A605 Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP 9e-56
3h0x_A152 Crystal Structure Of Peptide-Binding Domain Of Kar2 3e-53
3dob_A152 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 5e-53
4b9q_A605 Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L 2e-52
2v7y_A509 Crystal Structure Of The Molecular Chaperone Dnak F 2e-49
2op6_A152 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 1e-47
3dpo_A219 Crystal Structure Of The Substrate Binding Domain O 1e-42
1dky_A219 The Substrate Binding Domain Of Dnak In Complex Wit 2e-42
1dkx_A219 The Substrate Binding Domain Of Dnak In Complex Wit 2e-42
3dqg_A151 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 3e-41
3n8e_A182 Substrate Binding Domain Of The Human Heat Shock 70 9e-41
1bpr_A191 Nmr Structure Of The Substrate Binding Domain Of Dn 4e-39
1dg4_A115 Nmr Structure Of The Substrate Binding Domain Of Dn 1e-32
1q5l_A135 Nmr Structure Of The Substrate Binding Domain Of Dn 1e-32
2qw9_B394 Crystal Structure Of Bovine Hsc70 (1-394aa)in The A 2e-25
2qwn_A394 Crystal Structure Of Disulfide-Bond-Crosslinked Com 3e-25
1u00_A227 Hsca Substrate Binding Domain Complexed With The Is 2e-24
1ba1_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 9e-24
1ngg_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-23
1ngc_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-23
1nge_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-23
1nga_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-23
1ba0_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 1e-23
1ngd_A386 Structural Basis Of The 70-kilodalton Heat Shock Co 1e-23
1ngf_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-23
1ngh_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-23
1bup_A386 T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot 1e-23
1hpm_A386 How Potassium Affects The Activity Of The Molecular 1e-23
1ngb_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-23
1ats_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-23
1atr_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-23
3fe1_A403 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-22
2e8a_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-22
2e88_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-22
3a8y_A392 Crystal Structure Of The Complex Between The Bag5 B 1e-22
1qqn_A378 D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-22
1qqm_A378 D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-22
1kaz_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71e 2e-22
1kay_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71a 2e-22
1qqo_A378 E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 2e-22
1kax_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71m 2e-22
3cqx_A386 Chaperone Complex Length = 386 2e-22
3fzf_A381 Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP 2e-22
1hx1_A400 Crystal Structure Of A Bag Domain In Complex With T 2e-22
2bup_A381 T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 2e-22
3jxu_A409 Crystal Structure Of The Human 70kda Heat Shock Pro 3e-22
3gdq_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 4e-22
3d2e_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70, 7e-22
3d2f_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 9e-22
1s3x_A382 The Crystal Structure Of The Human Hsp70 Atpase Dom 9e-22
1hjo_A380 Atpase Domain Of Human Heat Shock 70kda Protein 1 L 1e-21
3kvg_A400 Crystal Structure Of The N-Terminal Domain Of Hsp70 1e-21
1xqs_C191 Crystal Structure Of The Hspbp1 Core Domain Complex 5e-21
4fsv_A387 Crystal Structure Of A Heat Shock 70kda Protein 2 ( 1e-20
3i33_A404 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-20
3lof_A113 C-Terminal Domain Of Human Heat Shock 70kda Protein 5e-20
2lmg_A75 Solution Structure Of The C-Terminal Domain (537-61 3e-19
2p32_A120 Crystal Structure Of The C-Terminal 10 Kda Subdomai 2e-18
3gl1_A387 Crystal Structure Of Atpase Domain Of Ssb1 Chaperon 1e-17
1ud0_A113 Crystal Structure Of The C-Terminal 10-Kda Subdomai 6e-17
3iuc_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 6e-16
3ldl_A384 Crystal Structure Of Human Grp78 (70kda Heat Shock 8e-16
3qfp_A390 Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D 4e-15
3qfu_A394 Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE 4e-15
1dkg_D383 Crystal Structure Of The Nucleotide Exchange Factor 2e-07
3d2f_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 8e-07
3d2e_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70, 3e-06
3c7n_A668 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 7e-05
2qxl_A658 Crystal Structure Analysis Of Sse1, A Yeast Hsp110 8e-05
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554 Back     alignment and structure 
Iteration: 1

 Score =  358 bits (919), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 172/240 (71%), Positives = 199/240 (82%)
Query: 1   MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
           ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE      
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61  XXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
                ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSD
Sbjct: 374 AVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSD 433
Query: 121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
           NQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK
Sbjct: 434 NQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 493
Query: 181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI 240
           +TG++NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE+YA+NM+ T+
Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554 Back     alignment and structure
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543 Back     alignment and structure
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock Cognate-70 Kd Substrate Binding Domain Obtained By Multidimensional Nmr Techniques Length = 159 Back     alignment and structure
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605 Back     alignment and structure
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2 Protein From Saccharomyces Cerevisiae Length = 152 Back     alignment and structure
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F44e5.5 From C.Elegans. Length = 152 Back     alignment and structure
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605 Back     alignment and structure
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509 Back     alignment and structure
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D Precursor From C.Elegans Length = 152 Back     alignment and structure
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E. Coli Dnak In Complex With A Short Pyrrhocoricin-Derived Inhibitor Peptide Length = 219 Back     alignment and structure
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 2 Native Crystals Length = 219 Back     alignment and structure
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 1 Selenomethionyl Crystals Length = 219 Back     alignment and structure
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F, Mitochondrial Precursor, From Caenorhabditis Elegans. Length = 151 Back     alignment and structure
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda Prote (Mortalin) Length = 182 Back     alignment and structure
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, Minimized Average Structure Length = 191 Back     alignment and structure
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In The Apo Form Length = 115 Back     alignment and structure
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak Bound To The Peptide Nrllltg Length = 135 Back     alignment and structure
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394 Back     alignment and structure
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu Recognition Peptide Elppvkihc Length = 227 Back     alignment and structure
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386 Back     alignment and structure
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386 Back     alignment and structure
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386 Back     alignment and structure
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386 Back     alignment and structure
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403 Back     alignment and structure
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391 Back     alignment and structure
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391 Back     alignment and structure
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392 Back     alignment and structure
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381 Back     alignment and structure
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381 Back     alignment and structure
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381 Back     alignment and structure
>pdb|3CQX|A Chain A, Chaperone Complex Length = 386 Back     alignment and structure
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381 Back     alignment and structure
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400 Back     alignment and structure
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381 Back     alignment and structure
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409 Back     alignment and structure
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408 Back     alignment and structure
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382 Back     alignment and structure
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382 Back     alignment and structure
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382 Back     alignment and structure
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380 Back     alignment and structure
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400 Back     alignment and structure
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With The Fragment Of Hsp70 Atpase Domain Length = 191 Back     alignment and structure
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387 Back     alignment and structure
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404 Back     alignment and structure
>pdb|3LOF|A Chain A, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b. Length = 113 Back     alignment and structure
>pdb|2LMG|A Chain A, Solution Structure Of The C-Terminal Domain (537-610) Of Human Heat Shock Protein 70 Length = 75 Back     alignment and structure
>pdb|2P32|A Chain A, Crystal Structure Of The C-Terminal 10 Kda Subdomain From C. Elegans Hsp70 Length = 120 Back     alignment and structure
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387 Back     alignment and structure
>pdb|1UD0|A Chain A, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of Hsc70 Length = 113 Back     alignment and structure
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408 Back     alignment and structure
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384 Back     alignment and structure
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390 Back     alignment and structure
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383 Back     alignment and structure
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675 Back     alignment and structure
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675 Back     alignment and structure
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 Back     alignment and structure
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 0.0
3d2f_A675 Heat shock protein homolog SSE1; nucleotide exchan 1e-178
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 1e-133
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 1e-121
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 1e-114
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 1e-113
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 1e-112
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 2e-95
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 6e-92
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 1e-91
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 7e-81
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 7e-71
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 5e-51
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 2e-49
2p32_A120 Heat shock 70 kDa protein A; three-helix bundle, c 4e-47
3lof_A113 Heat shock 70 kDa protein 1; structural genomics, 1e-43
1ud0_A113 HSC70, 70 kDa heat-shock-like protein; chaperone; 6e-41
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 3e-27
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 6e-05
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 2e-04
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554 Back     alignment and structure
 Score =  537 bits (1387), Expect = 0.0
 Identities = 195/241 (80%), Positives = 224/241 (92%)

Query: 1   MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGA 60
           ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDEAVAYGA
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373

Query: 61  AVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
           AVQAAILSG+ +E VQDLLLLDVTPLSLG+ETAGGVMTVLI RNTTIPTK+ Q F+TYSD
Sbjct: 374 AVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSD 433

Query: 121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
           NQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK
Sbjct: 434 NQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 493

Query: 181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI 240
           +TG++NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE+YA+NM+ T+
Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553

Query: 241 K 241
           +
Sbjct: 554 E 554
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675 Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605 Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Length = 509 Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Length = 152 Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Length = 152 Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Length = 152 Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Length = 219 Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Length = 182 Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Length = 227 Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Length = 151 Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Length = 135 Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404 Back     alignment and structure
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Length = 120 Back     alignment and structure
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Length = 113 Back     alignment and structure
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Length = 113 Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Length = 515 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Length = 272 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query330
4b9q_A605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 100.0
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 100.0
3d2f_A675 Heat shock protein homolog SSE1; nucleotide exchan 100.0
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 100.0
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 100.0
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 100.0
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 100.0
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 100.0
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 99.97
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 99.97
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 99.97
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 99.96
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 99.9
3lof_A113 Heat shock 70 kDa protein 1; structural genomics, 99.79
1ud0_A113 HSC70, 70 kDa heat-shock-like protein; chaperone; 99.72
2p32_A120 Heat shock 70 kDa protein A; three-helix bundle, c 99.68
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 99.3
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 99.25
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 99.25
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 99.17
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 98.57
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 98.53
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 98.19
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 97.78
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 97.64
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 97.63
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 97.58
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 97.43
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 96.91
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 96.81
3js6_A355 Uncharacterized PARM protein; partition, segregati 96.67
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 96.09
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 95.9
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 95.76
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 95.73
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 95.62
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 95.59
2zf5_O497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 95.52
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 95.5
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 95.33
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 95.19
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 95.06
3g25_A501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 95.05
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 94.95
3h3n_X506 Glycerol kinase; ATP-binding, glycerol metabolism, 94.89
2p3r_A510 Glycerol kinase; glycerol metabolism, allosteric r 94.7
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 94.58
2dpn_A495 Glycerol kinase; thermus thermophilus HB8, structu 94.37
2d4w_A504 Glycerol kinase; alpha and beta protein, ribonucle 94.18
2w40_A503 Glycerol kinase, putative; closed conformation, ma 94.11
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 93.84
1nbw_A607 Glycerol dehydratase reactivase alpha subunit; mol 93.63
2uyt_A489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 93.38
2d0o_A610 DIOL dehydratase-reactivating factor large subunit 92.77
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 91.68
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 87.0
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
Probab=100.00  E-value=1e-51  Score=412.22  Aligned_cols=288  Identities=50%  Similarity=0.784  Sum_probs=274.6

Q ss_pred             CcHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHHHhCCCCccccCCchhhHHhHHHHHHHHHhCCCCccccccee
Q 020168            1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLL   80 (330)
Q Consensus         1 i~~i~~~l~~a~l~~~dI~~V~lvGGsSriP~V~~~l~~~f~~~~~~~~ln~deaVA~GAa~~a~~~s~~~~~~~~~~~~   80 (330)
                      +.+|+++|+++++++.+|+.|+||||+||||.|++.|++.| +.++..++|||+|||+|||++|+.+++.    ++++.+
T Consensus       317 ~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l  391 (605)
T 4b9q_A          317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLL  391 (605)
T ss_dssp             THHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEE
T ss_pred             HHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEE
Confidence            46899999999999999999999999999999999999999 7789999999999999999999999954    578999


Q ss_pred             eeccceeeEEEEecceeEEEeeCCCCCCceeEEEEeecCCCCCeEEEEEeeccccccCCCceeeEEEecCCCCCCCCCCe
Q 020168           81 LDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQ  160 (330)
Q Consensus        81 ~d~~~~~igi~~~~~~~~~l~~~g~~lP~~~~~~~~~~~d~q~~i~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~~  160 (330)
                      .|++|++||++..+|.+.+|||+|+++|++++.+|++..|+|+.+.|+||||+.....+|..||+|.|+|+|+.|.|.++
T Consensus       392 ~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~  471 (605)
T 4b9q_A          392 LDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQ  471 (605)
T ss_dssp             ECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCC
T ss_pred             EeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeeCCccEEEEEEeccCCcceeeeeccCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHHh
Q 020168          161 INVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI  240 (330)
Q Consensus       161 i~v~~~~d~~G~l~v~~~~~~t~~~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~i~~~r~~l  240 (330)
                      |+|+|.+|.||+|+|++.+..||++.+++|.+. ..||+++++++++++.++..+|+..+++.+++|+||+|+|.+|+.|
T Consensus       472 i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~  550 (605)
T 4b9q_A          472 IEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQV  550 (605)
T ss_dssp             EEEEEEECTTSCEEEEEEETTTCCEECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEcCCcEEEEEEEecCCCcEEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999877 6899999999999999999999999999999999999999999999


Q ss_pred             hhhhhhccCChhhHHHHHHHHHHHHHHHccCCccchHHHHHHHHHHHHHHHHHHHHHHh
Q 020168          241 KDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ  299 (330)
Q Consensus       241 ~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~~~a~~ee~~~kl~~L~~~~~~i~~R~~e  299 (330)
                      .+  +..++++++++++...++++++||+.+   +.++|++++++|++.+.||..++++
T Consensus       551 ~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~  604 (605)
T 4b9q_A          551 EE--AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ  604 (605)
T ss_dssp             HH--HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred             Hh--hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            75  788999999999999999999999987   6899999999999999999999775
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Back     alignment and structure
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Back     alignment and structure
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Back     alignment and structure
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Back     alignment and structure
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 330
d1yuwa1159 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus 4e-76
d1dkza2118 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxI 2e-57
d1u00a2115 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc6 3e-51
d1ud0a_84 a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 1e-33
d1bupa2193 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP 3e-29
d1dkgd2198 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP 5e-25
d1dkza197 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 3e-21
d1u00a1112 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) 2e-20
d1jcea2196 c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre 5e-12
d2zgya2163 c.55.1.1 (A:158-320) Plasmid segregation protein P 8e-04
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 159 Back     information, alignment and structure

class: All beta proteins
fold: Heat shock protein 70kD (HSP70), peptide-binding domain
superfamily: Heat shock protein 70kD (HSP70), peptide-binding domain
family: Heat shock protein 70kD (HSP70), peptide-binding domain
domain: DnaK
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  228 bits (583), Expect = 4e-76
 Identities = 131/159 (82%), Positives = 147/159 (92%)

Query: 72  NEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYE 131
           +E VQDLLLLDVTPLSLG+ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYE
Sbjct: 1   SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60

Query: 132 GERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITIT 191
           GER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+TG++NKITIT
Sbjct: 61  GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120

Query: 192 NDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALE 230
           NDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Length = 118 Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 84 Back     information, alignment and structure
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193 Back     information, alignment and structure
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198 Back     information, alignment and structure
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} Length = 97 Back     information, alignment and structure
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 112 Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196 Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Length = 163 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query330
d1yuwa1159 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 99.98
d1dkza2118 DnaK {Escherichia coli [TaxId: 562]} 99.93
d1u00a2115 Chaperone protein hscA (Hsc66) {Escherichia coli [ 99.92
d1ud0a_84 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 99.74
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 99.64
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 99.61
d1dkza197 DnaK {Escherichia coli [TaxId: 562]} 99.25
d1u00a1112 Chaperone protein hscA (Hsc66) {Escherichia coli [ 99.23
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 99.17
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 97.69
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 97.22
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 96.2
d2p3ra2247 Glycerol kinase {Escherichia coli [TaxId: 562]} 95.88
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 95.79
d1r59o2235 Glycerol kinase {Enterococcus casseliflavus [TaxId 95.62
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 93.27
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 88.62
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 87.67
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 85.22
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: All beta proteins
fold: Heat shock protein 70kD (HSP70), peptide-binding domain
superfamily: Heat shock protein 70kD (HSP70), peptide-binding domain
family: Heat shock protein 70kD (HSP70), peptide-binding domain
domain: DnaK
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.98  E-value=1.4e-32  Score=224.73  Aligned_cols=157  Identities=83%  Similarity=1.209  Sum_probs=149.9

Q ss_pred             ccccceeeeccceeeEEEEecceeEEEeeCCCCCCceeEEEEeecCCCCCeEEEEEeeccccccCCCceeeEEEecCCCC
Q 020168           74 KVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPP  153 (330)
Q Consensus        74 ~~~~~~~~d~~~~~igi~~~~~~~~~l~~~g~~lP~~~~~~~~~~~d~q~~i~i~i~~g~~~~~~~~~~ig~~~i~~i~~  153 (330)
                      .++++.+.|++|+++||.+.+|.+.+|||+|++||++++..|+|..|+|+.+.|.||||++..+.+|.+||+|.|+|+|+
T Consensus         3 ~v~~~~l~DV~p~slGie~~gg~~~~iI~rnt~iP~~~~~~f~T~~d~Q~~v~i~i~qGe~~~~~~n~~lg~f~l~~ip~   82 (159)
T d1yuwa1           3 NVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPP   82 (159)
T ss_dssp             CTTSSCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCC
T ss_pred             ccceEEEEEecCCceEEEEcCCEEEEEEcCCcccceeeeEEEeeccCCCcEEEEEEEcCchhhccCccEEEEEEECCCCc
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCeEEEEEEeeCCccEEEEEEeccCCcceeeeeccCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q 020168          154 APRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALE  230 (330)
Q Consensus       154 ~~~~~~~i~v~~~~d~~G~l~v~~~~~~t~~~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~a~N~LE  230 (330)
                      .|+|.++|.|+|++|.||+|+|++.+..||+...+.+.+..+.|++++++++++++.++..+|+..+++.++||.||
T Consensus        83 ~~~G~~~I~Vtf~id~nGil~V~A~d~~Tg~~~~i~I~~~~~~Ls~eEIek~i~eae~~~~eDe~~r~~ieakn~lE  159 (159)
T d1yuwa1          83 APRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE  159 (159)
T ss_dssp             CSTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECS
T ss_pred             CCCCCceEEEEEEEcCCCeEEEEEEEcCCCCeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999887889999999999999999999988888777777664
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure