Citrus Sinensis ID: 020195

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
ccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEEcccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccEEEEEEEEEEccEEEEEEcccccccccccc
cccccccccEEEEcccccHHHccccccccEEEEEcccccccccHHccccEEccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccEEEEEEccccccHHHHcccccccEEEEEEHHHccccccccccHHHHHHHHHHHHcccccEEEccccEEEEEEEcccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccEEEEEEEEccccEEEEEEEEEEEEEEEEc
mstasinnWCLTSVSQAQSSliksstlrpsivarlnspasppslirnepvfaapapiinpnwredmaNQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAqlqtpsdtkafdSVERIKEGFIHFkrekyeknpALYSELakgqspkymvfacsdsrvcpshvldfqpgeafvvrnvanivppydqtkyagVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMsftfdgnnstdfIEDWVKIgipakskvltehgdkpfgdqctycekeAVNVSlsnlltypfvreGLVNKTLALKGGYYDFVNGSFElwgldfslspplsv
mstasinnwcLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEqitaqlqtpsdtkafdsVERIKEGfihfkrekyekNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLdfslspplsv
MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYeeaiealkkllkekedlkPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKyagvgaaveyavLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
*******NWCLT*************************************VFAAPAPIINPNW***************************************************SVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFS*******
********WC*********************************************P************************************************************RIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLS*
MSTASINNWCLTSV**********STLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
********W*****SQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWRxxxxxxxxxxxxxxxxxxxxxxxxxKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query329 2.2.26 [Sep-21-2011]
P27141321 Carbonic anhydrase, chlor N/A no 0.966 0.990 0.725 1e-132
P27140347 Carbonic anhydrase, chlor yes no 0.975 0.925 0.718 1e-130
P16016319 Carbonic anhydrase, chlor N/A no 0.948 0.978 0.701 1e-127
P17067328 Carbonic anhydrase, chlor N/A no 0.972 0.975 0.691 1e-127
P46510330 Carbonic anhydrase OS=Fla N/A no 0.957 0.954 0.689 1e-123
P46511330 Carbonic anhydrase OS=Fla N/A no 0.857 0.854 0.746 1e-123
P46512330 Carbonic anhydrase 1 OS=F N/A no 0.857 0.854 0.746 1e-123
P46281329 Carbonic anhydrase OS=Fla N/A no 0.857 0.857 0.743 1e-122
P42737259 Carbonic anhydrase 2, chl no no 0.781 0.992 0.766 1e-116
P46513190 Carbonic anhydrase 2 (Fra N/A no 0.571 0.989 0.712 9e-79
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function desciption
 Score =  470 bits (1210), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/332 (72%), Positives = 274/332 (82%), Gaps = 14/332 (4%)

Query: 1   MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPS---LIRNEPVFAAPAPI 57
           MSTASIN+ CLT +S AQ+SL K +  RP   ARL++ +S  S   LIRNEPVFAAP PI
Sbjct: 1   MSTASINS-CLT-ISPAQASLKKPT--RPVAFARLSNSSSSTSVPSLIRNEPVFAAPTPI 56

Query: 58  INPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVER 117
           INP  RE+MA +SYE+AI AL+KLL EK +L P+AAA+V+QITA+LQ+   +K FD VE 
Sbjct: 57  INPILREEMAKESYEQAIAALEKLLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVEH 116

Query: 118 IKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNV 177
           +K GFIHFK EKYEKNPALY EL+KGQSPK+MVFACSDSRVCPSHVL+FQPGEAFVVRN+
Sbjct: 117 MKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNI 176

Query: 178 ANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGN 237
           AN+VP YD+T+Y+GVGAA+EYAVLHLK       V NIVVIGHSACGGIKGLMS   DG+
Sbjct: 177 ANMVPAYDKTRYSGVGAAIEYAVLHLK-------VENIVVIGHSACGGIKGLMSLPADGS 229

Query: 238 NSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVN 297
            ST FIEDWVKIG+PAK+KV  EH DK F DQCT CEKEAVNVSL NLLTYPFVREGLV 
Sbjct: 230 ESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVK 289

Query: 298 KTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 329
           KTLALKGG+YDFVNG FELWGL+F LSP LSV
Sbjct: 290 KTLALKGGHYDFVNGGFELWGLEFGLSPSLSV 321
Reversible hydration of carbon dioxide.
Nicotiana tabacum (taxid: 4097)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2 Back     alignment and function description
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2 Back     alignment and function description
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2 Back     alignment and function description
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1 Back     alignment and function description
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1 Back     alignment and function description
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1 Back     alignment and function description
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2 Back     alignment and function description
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
339958979321 chloroplast carbonic anhydrase [Dimocarp 0.975 1.0 0.820 1e-154
225452452335 PREDICTED: carbonic anhydrase, chloropla 0.975 0.958 0.746 1e-142
255567325326 carbonic anhydrase, putative [Ricinus co 0.975 0.984 0.751 1e-141
118489443321 unknown [Populus trichocarpa x Populus d 0.969 0.993 0.755 1e-140
224055529332 predicted protein [Populus trichocarpa] 0.969 0.960 0.755 1e-140
1354517320 carbonic anhydrase [Populus tremula x Po 0.966 0.993 0.755 1e-139
1354515320 carbonic anhydrase [Populus tremula x Po 0.966 0.993 0.752 1e-139
112292669324 chloroplast carbonic anhydrase [Pachysan 0.975 0.990 0.740 1e-136
20502881326 carbonic anhydrase [Gossypium hirsutum] 0.972 0.981 0.731 1e-134
147821810331 hypothetical protein VITISV_037833 [Viti 0.975 0.969 0.702 1e-132
>gi|339958979|gb|AEK25173.1| chloroplast carbonic anhydrase [Dimocarpus longan] Back     alignment and taxonomy information
 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 270/329 (82%), Positives = 291/329 (88%), Gaps = 8/329 (2%)

Query: 1   MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINP 60
           MSTASIN+  LTS+  +QSSL K +TLRP+I ARLNS  SPPSLIRNEPVFAAPAPIINP
Sbjct: 1   MSTASINSCSLTSLFSSQSSL-KRATLRPTISARLNSSPSPPSLIRNEPVFAAPAPIINP 59

Query: 61  NWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKE 120
            WREDMAN+SYEEAIEALKKLL EK++LKPVAAAKVEQITAQLQT +D K FD+VER+K+
Sbjct: 60  TWREDMANKSYEEAIEALKKLLSEKDELKPVAAAKVEQITAQLQTTADGKPFDAVERMKD 119

Query: 121 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANI 180
           GFIHFKREKYEKNPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVANI
Sbjct: 120 GFIHFKREKYEKNPALYGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANI 179

Query: 181 VPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGNNST 240
           VPPYDQ KYAGVGAAVEYAVLHLK       V  IVVIGHSACGGIKGLMSFTF+G NST
Sbjct: 180 VPPYDQIKYAGVGAAVEYAVLHLK-------VQEIVVIGHSACGGIKGLMSFTFEGANST 232

Query: 241 DFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTL 300
           DFIEDWVKIG+PAK  VL EHG  PF  QCTYCEK AV+VS+ NLL+YPFVR+GLV KTL
Sbjct: 233 DFIEDWVKIGLPAKGSVLAEHGGVPFEQQCTYCEKAAVSVSIGNLLSYPFVRDGLVKKTL 292

Query: 301 ALKGGYYDFVNGSFELWGLDFSLSPPLSV 329
           ALKGGYYDFVNGSFELW ++F LSPPLSV
Sbjct: 293 ALKGGYYDFVNGSFELWSVEFGLSPPLSV 321

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225452452|ref|XP_002277957.1| PREDICTED: carbonic anhydrase, chloroplastic [Vitis vinifera] gi|296087661|emb|CBI34917.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255567325|ref|XP_002524642.1| carbonic anhydrase, putative [Ricinus communis] gi|223536003|gb|EEF37661.1| carbonic anhydrase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|118489443|gb|ABK96524.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|224055529|ref|XP_002298524.1| predicted protein [Populus trichocarpa] gi|222845782|gb|EEE83329.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|1354517|gb|AAB65822.1| carbonic anhydrase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|1354515|gb|AAC49785.1| carbonic anhydrase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|112292669|gb|ABI14813.1| chloroplast carbonic anhydrase [Pachysandra terminalis] Back     alignment and taxonomy information
>gi|20502881|gb|AAM22683.1|AF482951_1 carbonic anhydrase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|147821810|emb|CAN61667.1| hypothetical protein VITISV_037833 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
TAIR|locus:2084198347 CA1 "carbonic anhydrase 1" [Ar 0.978 0.927 0.644 2.8e-105
TAIR|locus:2185460331 CA2 "carbonic anhydrase 2" [Ar 0.781 0.776 0.669 3.6e-89
TAIR|locus:2016109280 BCA4 "beta carbonic anhydrase 0.775 0.910 0.526 3.3e-70
TAIR|locus:2034797258 BCA3 "beta carbonic anhydrase 0.778 0.992 0.501 4e-67
TAIR|locus:2134218302 BCA5 "beta carbonic anhydrase 0.626 0.682 0.429 3.2e-42
TAIR|locus:2196292290 BCA6 "beta carbonic anhydrase 0.632 0.717 0.387 3.5e-36
TIGR_CMR|GSU_2307211 GSU_2307 "carbonic anhydrase" 0.580 0.905 0.373 1.3e-29
TIGR_CMR|CJE_0288211 CJE_0288 "carbonic anhydrase" 0.595 0.928 0.331 2.6e-22
UNIPROTKB|P0ABE9219 cynT "carbonic anhydrase monom 0.562 0.844 0.331 3.4e-22
UNIPROTKB|Q54735274 icfA "Carbonic anhydrase" [Syn 0.574 0.689 0.287 1.3e-20
TAIR|locus:2084198 CA1 "carbonic anhydrase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
 Identities = 221/343 (64%), Positives = 245/343 (71%)

Query:     1 MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARL------------NSPASPPSLIRNE 48
             MSTA ++ + LTS+S +QSSL K S    S VA L            +S  S P+LIRNE
Sbjct:     1 MSTAPLSGFFLTSLSPSQSSLQKLSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNE 60

Query:    49 PVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQT--P 106
             PVFAAPAPII P W E+M  ++Y                   VAAAKVEQITA LQT   
Sbjct:    61 PVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTS 120

Query:   107 SDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDF 166
             SD KAFD VE IK+GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDF
Sbjct:   121 SDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDF 180

Query:   167 QPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKCRLILLQVSNIVVIGHSACGGI 226
             QPG+AFVVRN+AN+VPP+D+ K            LHLK       V NIVVIGHSACGGI
Sbjct:   181 QPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLK-------VENIVVIGHSACGGI 233

Query:   227 KGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLL 286
             KGLMSF  DGNNSTDFIEDWVKI +PAKSKV++E GD  F DQC  CE+EAVNVSL+NLL
Sbjct:   234 KGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLL 293

Query:   287 TYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 329
             TYPFVREGLV  TLALKGGYYDFV G+FELWGL+F LS   SV
Sbjct:   294 TYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSV 336
GO:0004089 "carbonate dehydratase activity" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0015976 "carbon utilization" evidence=IEA;ISS
GO:0009579 "thylakoid" evidence=IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009409 "response to cold" evidence=IEP;RCA
GO:0010319 "stromule" evidence=IDA
GO:0042742 "defense response to bacterium" evidence=IEP;RCA
GO:0016020 "membrane" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IDA
GO:0010037 "response to carbon dioxide" evidence=IGI
GO:0010119 "regulation of stomatal movement" evidence=IGI
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006098 "pentose-phosphate shunt" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009814 "defense response, incompatible interaction" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0019684 "photosynthesis, light reaction" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
TAIR|locus:2185460 CA2 "carbonic anhydrase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016109 BCA4 "beta carbonic anhydrase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034797 BCA3 "beta carbonic anhydrase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134218 BCA5 "beta carbonic anhydrase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196292 BCA6 "beta carbonic anhydrase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2307 GSU_2307 "carbonic anhydrase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0288 CJE_0288 "carbonic anhydrase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
UNIPROTKB|P0ABE9 cynT "carbonic anhydrase monomer" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q54735 icfA "Carbonic anhydrase" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P16016CAHC_SPIOL4, ., 2, ., 1, ., 10.70150.94830.9780N/Ano
P46512CAH1_FLALI4, ., 2, ., 1, ., 10.74650.85710.8545N/Ano
P46510CAHX_FLABI4, ., 2, ., 1, ., 10.68920.95740.9545N/Ano
P46511CAHX_FLABR4, ., 2, ., 1, ., 10.74650.85710.8545N/Ano
P17067CAHC_PEA4, ., 2, ., 1, ., 10.69130.97260.9756N/Ano
P46281CAHX_FLAPR4, ., 2, ., 1, ., 10.74310.85710.8571N/Ano
P27140CAHC_ARATH4, ., 2, ., 1, ., 10.71800.97560.9250yesno
P27141CAHC_TOBAC4, ., 2, ., 1, ., 10.72590.96650.9906N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.10.983
4th Layer4.2.1.10.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
PLN03014347 PLN03014, PLN03014, carbonic anhydrase 1e-167
PLN03019330 PLN03019, PLN03019, carbonic anhydrase 1e-136
PLN00416258 PLN00416, PLN00416, carbonate dehydratase 1e-122
cd00884190 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) 1e-100
PLN03006301 PLN03006, PLN03006, carbonate dehydratase 3e-57
smart00947154 smart00947, Pro_CA, Carbonic anhydrase 4e-55
PLN02154290 PLN02154, PLN02154, carbonic anhydrase 2e-50
pfam00484149 pfam00484, Pro_CA, Carbonic anhydrase 2e-50
COG0288207 COG0288, CynT, Carbonic anhydrase [Inorganic ion t 1e-44
cd00382119 cd00382, beta_CA, Carbonic anhydrases (CA) are zin 9e-43
cd00883182 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) 6e-32
cd03378154 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) 5e-23
PRK10437220 PRK10437, PRK10437, carbonic anhydrase; Provisiona 8e-16
cd03379142 cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) 1e-08
PRK15219245 PRK15219, PRK15219, carbonic anhydrase; Provisiona 2e-06
>gnl|CDD|178588 PLN03014, PLN03014, carbonic anhydrase Back     alignment and domain information 
 Score =  468 bits (1206), Expect = e-167
 Identities = 246/343 (71%), Positives = 273/343 (79%), Gaps = 21/343 (6%)

Query: 1   MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARL------------NSPASPPSLIRNE 48
           MSTA ++ + LTS+S +QSSL K S    S VA L            +S  S P+LIRNE
Sbjct: 1   MSTAPLSGFFLTSLSPSQSSLQKLSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNE 60

Query: 49  PVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQT--P 106
           PVFAAPAPII P W E+M  ++Y+EAIEALKKLL EKE+LK VAAAKVEQITA LQT   
Sbjct: 61  PVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTS 120

Query: 107 SDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDF 166
           SD KAFD VE IK+GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDF
Sbjct: 121 SDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDF 180

Query: 167 QPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGI 226
           QPG+AFVVRN+AN+VPP+D+ KY GVGAA+EYAVLHLK       V NIVVIGHSACGGI
Sbjct: 181 QPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLK-------VENIVVIGHSACGGI 233

Query: 227 KGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLL 286
           KGLMSF  DGNNSTDFIEDWVKI +PAKSKV++E GD  F DQC  CE+EAVNVSL+NLL
Sbjct: 234 KGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLL 293

Query: 287 TYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 329
           TYPFVREGLV  TLALKGGYYDFV G+FELWGL+F LS   SV
Sbjct: 294 TYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSV 336

Length = 347
>gnl|CDD|166660 PLN03019, PLN03019, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|177809 PLN00416, PLN00416, carbonate dehydratase Back     alignment and domain information
>gnl|CDD|238449 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|178583 PLN03006, PLN03006, carbonate dehydratase Back     alignment and domain information
>gnl|CDD|214929 smart00947, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|215111 PLN02154, PLN02154, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|215941 pfam00484, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|223365 COG0288, CynT, Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|238224 cd00382, beta_CA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|238448 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|239473 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|182460 PRK10437, PRK10437, carbonic anhydrase; Provisional Back     alignment and domain information
>gnl|CDD|239474 cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|237927 PRK15219, PRK15219, carbonic anhydrase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 329
PLN03014347 carbonic anhydrase 100.0
PLN03019330 carbonic anhydrase 100.0
PLN00416258 carbonate dehydratase 100.0
PLN03006301 carbonate dehydratase 100.0
cd00884190 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-c 100.0
PRK10437220 carbonic anhydrase; Provisional 100.0
KOG1578276 consensus Predicted carbonic anhydrase involved in 100.0
PLN02154290 carbonic anhydrase 100.0
cd00883182 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-c 100.0
PRK15219245 carbonic anhydrase; Provisional 100.0
COG0288207 CynT Carbonic anhydrase [Inorganic ion transport a 100.0
cd03378154 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-c 100.0
PF00484153 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Ca 100.0
cd00382119 beta_CA Carbonic anhydrases (CA) are zinc-containi 100.0
cd03379142 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-c 100.0
KOG1578276 consensus Predicted carbonic anhydrase involved in 97.95
>PLN03014 carbonic anhydrase Back     alignment and domain information 
Probab=100.00  E-value=9.4e-98  Score=717.58  Aligned_cols=321  Identities=77%  Similarity=1.192  Sum_probs=296.9

Q ss_pred             CCcccccceeecccccccccccccCCCCc-eEEEecc------------CCCCCCCcccCCccccCCCcccCcchhhHhh
Q 020195            1 MSTASINNWCLTSVSQAQSSLIKSSTLRP-SIVARLN------------SPASPPSLIRNEPVFAAPAPIINPNWREDMA   67 (329)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (329)
                      |||++|||||+||++++++++++ .++|| ++||+|+            |+++||+||||+||||||+|||||+|+|||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~   79 (347)
T PLN03014          1 MSTAPLSGFFLTSLSPSQSSLQK-LSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNEPVFAAPAPIIAPYWSEEMG   79 (347)
T ss_pred             CccccccceeccccCcccccccc-cccCCcceEEEeccccccccccCCCCCCCCchhhcCCccccCCCcccCchhHhhhc
Confidence            99999999999999999999977 78899 8999996            1133899999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhcCCchhHhHhhHHHHHhhcCCC--CCChHHHHHHHHHHHHHHHhhhccCChhhHHhhhcCCC
Q 020195           68 NQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPS--DTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQS  145 (329)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~~~~--~~~p~~~l~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~  145 (329)
                      ++|||+||++|+|||+||++|+.+|++||+++|+||++..  .+.++|++++|++||++|+++.+.+++++|+++++||+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lerL~~GN~rF~~~~~~~~~~~~~~La~GQ~  159 (347)
T PLN03014         80 TEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQS  159 (347)
T ss_pred             hhhHHHHHHHHHhhcccccccchHHHHhHHHHHHHHhcccCCCCCCcCHHHHHHHHHHHHHhhccccCHHHHHhhccCCC
Confidence            9999999999999999999999999999999999999643  35689999999999999999999999999999999999


Q ss_pred             CcEEEEeecCCCCChhhhcCCCCCceEEEeccCCcCCCCCCCcccchhhhHHHHHHHhhhhhhccCcceEEEeccCCCCc
Q 020195          146 PKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGG  225 (329)
Q Consensus       146 Pk~lVItCsDSRV~Pe~ifg~~pGD~FVvRNaGN~V~~~d~~~~~~v~asLEYAV~~L~~~~~~~~V~~IVV~GHT~CGa  225 (329)
                      |+++||+||||||+|+.+||++|||+||+||+||+|+++|...|++++++|||||.+|+       |++|||||||+|||
T Consensus       160 P~alvI~CsDSRV~Pe~Ifd~~pGDlFVvRNaGNiV~~~d~~~~~~v~asLEYAV~~L~-------V~~IVV~GHs~CGa  232 (347)
T PLN03014        160 PKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLK-------VENIVVIGHSACGG  232 (347)
T ss_pred             CCEEEEEeccCCCCHHHHhCCCCCcEEEEeccccccCcccccccccchhHHHHHHHHhC-------CCEEEEeCCCCchH
Confidence            99999999999999999999999999999999999999876556679999999999999       99999999999999


Q ss_pred             ccccccccCCCCCCchhHHHHHHcccchhhhhhhhcCCCCccccccHHHHHHHHHHHHHHhcChhHHhhhcCCceEEEEE
Q 020195          226 IKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGG  305 (329)
Q Consensus       226 v~A~~~~~~~g~~~~~~I~~wl~~~~pa~~~~~~~~~~~~~~e~~~~~~~enV~~qV~~L~s~P~V~~~v~~~~L~V~G~  305 (329)
                      |+|+++..+++....++|++|+..+.|++.+...+.+...+.+++..++++||++||++|++||+|++++++|+|.||||
T Consensus       233 V~Aa~~~~~~g~~~~~~I~~wl~~i~pA~~~v~~~~~~~~~~d~~~~~ekeNV~~qV~nL~t~P~V~eav~~G~L~I~G~  312 (347)
T PLN03014        233 IKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGG  312 (347)
T ss_pred             HHHHHhccccccccchhHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCcEEEEE
Confidence            99998765555455689999999999998877666666677788878889999999999999999999999999999999


Q ss_pred             EEEccCCeEEEEeccCCCCCCCCC
Q 020195          306 YYDFVNGSFELWGLDFSLSPPLSV  329 (329)
Q Consensus       306 vYDi~TG~v~~v~~d~~~~~~~~~  329 (329)
                      +||++||+|++|+.+++++|++++
T Consensus       313 ~YDi~TG~V~~l~~~~~~~~~~~~  336 (347)
T PLN03014        313 YYDFVKGAFELWGLEFGLSETSSV  336 (347)
T ss_pred             EEECCCceEEEeccccccCCcccc
Confidence            999999999999999999999875

>PLN03019 carbonic anhydrase Back     alignment and domain information
>PLN00416 carbonate dehydratase Back     alignment and domain information
>PLN03006 carbonate dehydratase Back     alignment and domain information
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PRK10437 carbonic anhydrase; Provisional Back     alignment and domain information
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN02154 carbonic anhydrase Back     alignment and domain information
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PRK15219 carbonic anhydrase; Provisional Back     alignment and domain information
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4 Back     alignment and domain information
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
1ekj_A221 The X-Ray Crystallographic Structure Of Beta Carbon 1e-94
1ddz_A 496 X-Ray Structure Of A Beta-Carbonic Anhydrase From T 6e-13
3qy1_A223 1.54a Resolution Crystal Structure Of A Beta-Carbon 8e-13
2w3q_A243 Structure And Inhibition Of The Co2-Sensing Carboni 2e-12
2w3n_A239 Structure And Inhibition Of The Co2-Sensing Carboni 2e-12
3e3g_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant G41a 2e-12
3e24_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant W39f 6e-12
2a8c_A229 Haemophilus Influenzae Beta-Carbonic Anhydrase Leng 7e-12
3e28_A229 H. Influenzae Beta-carbonic Anhydrase, Variant Y181 7e-12
3mf3_A221 Cobalt(Ii)-Substituted Haemophilus Influenzae B-Car 8e-12
1i6o_A220 Crystal Structure Of E. Coli Beta Carbonic Anhydras 1e-11
1i6p_A220 Crystal Structure Of E. Coli Beta Carbonic Anhydras 1e-11
3e2x_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant V47a 2e-11
3e1v_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant D44n 3e-11
3ucj_A227 Coccomyxa Beta-Carbonic Anhydrase In Complex With A 5e-10
3eyx_A216 Crystal Structure Of Carbonic Anhydrase Nce103 From 2e-09
1ym3_A215 Crystal Structure Of Carbonic Anhydrase Rv3588c Fro 8e-08
2a5v_A213 Crystal Structure Of M. Tuberculosis Beta Carbonic 9e-08
>pdb|1EKJ|A Chain A, The X-Ray Crystallographic Structure Of Beta Carbonic Anhydrase From The C3 Dicot Pisum Sativum Length = 221 Back     alignment and structure 
Iteration: 1

 Score =  343 bits (879), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 163/217 (75%), Positives = 178/217 (82%), Gaps = 7/217 (3%)
Query: 113 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAF 172
           ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAF
Sbjct: 12  EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAF 71
Query: 173 VVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKCRLILLQVSNIVVIGHSACGGIKGLMSF 232
           VVRNVAN+VPPYDQ K            LHLK       VSNIVVIGHSACGGIKGL+SF
Sbjct: 72  VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLK-------VSNIVVIGHSACGGIKGLLSF 124
Query: 233 TFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVR 292
            FDG  STDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFVR
Sbjct: 125 PFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVR 184
Query: 293 EGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 329
           EGLVNKTLALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 185 EGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV 221
>pdb|1DDZ|A Chain A, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red Alga, Porphyridium Purpureum R-1 Length = 496 Back     alignment and structure
>pdb|3QY1|A Chain A, 1.54a Resolution Crystal Structure Of A Beta-Carbonic Anhydrase From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 Length = 223 Back     alignment and structure
>pdb|2W3Q|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic Anhydrase Can2 From The Pathogenic Fungus Cryptococcus Neoformans Length = 243 Back     alignment and structure
>pdb|2W3N|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic Anhydrase Can2 From The Pathogenic Fungus Cryptococcus Neoformans Length = 239 Back     alignment and structure
>pdb|3E3G|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a Length = 229 Back     alignment and structure
>pdb|3E24|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f Length = 229 Back     alignment and structure
>pdb|2A8C|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase Length = 229 Back     alignment and structure
>pdb|3E28|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f Length = 229 Back     alignment and structure
>pdb|3MF3|A Chain A, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic Anhydrase Length = 221 Back     alignment and structure
>pdb|1I6O|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase (Ecca) Length = 220 Back     alignment and structure
>pdb|1I6P|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase (Ecca) Length = 220 Back     alignment and structure
>pdb|3E2X|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a Length = 229 Back     alignment and structure
>pdb|3E1V|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n Length = 229 Back     alignment and structure
>pdb|3UCJ|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Acetazolamide Length = 227 Back     alignment and structure
>pdb|3EYX|A Chain A, Crystal Structure Of Carbonic Anhydrase Nce103 From Saccharomyces Cerevisiae Length = 216 Back     alignment and structure
>pdb|1YM3|A Chain A, Crystal Structure Of Carbonic Anhydrase Rv3588c From Mycobacterium Tuberculosis Length = 215 Back     alignment and structure
>pdb|2A5V|A Chain A, Crystal Structure Of M. Tuberculosis Beta Carbonic Anhydrase, Rv3588c, Tetrameric Form Length = 213 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
1ekj_A221 Beta-carbonic anhydrase; rossman fold domain, stra 1e-98
3qy1_A223 Carbonic anhydrase; structural genomics, center fo 2e-79
3eyx_A216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 5e-78
3ucj_A227 Carbonic anhydrase; alpha/beta, strand exchange, l 4e-77
2w3q_A243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 1e-76
3e3i_A229 Carbonic anhydrase 2, beta carbonic anhydrase; all 2e-76
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 7e-74
1ddz_A496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 7e-72
1ym3_A215 Carbonic anhydrase (carbonate dehydratase) (carbo 2e-65
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 9e-35
3teo_A204 Carbon disulfide hydrolase; beta carbonic anhydras 3e-30
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 8e-27
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 7e-26
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Length = 221 Back     alignment and structure
 Score =  289 bits (742), Expect = 1e-98
 Identities = 173/225 (76%), Positives = 190/225 (84%), Gaps = 7/225 (3%)

Query: 105 TPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVL 164
           +       ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVL
Sbjct: 4   SSDGIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVL 63

Query: 165 DFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACG 224
           DFQPGEAFVVRNVAN+VPPYDQ KYAG GAA+EYAVLHLK       VSNIVVIGHSACG
Sbjct: 64  DFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLK-------VSNIVVIGHSACG 116

Query: 225 GIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSN 284
           GIKGL+SF FDG  STDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL N
Sbjct: 117 GIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGN 176

Query: 285 LLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 329
           LLTYPFVREGLVNKTLALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 177 LLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV 221
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Length = 223 Back     alignment and structure
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Length = 216 Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Length = 227 Back     alignment and structure
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Length = 243 Back     alignment and structure
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Length = 229 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Length = 215 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Length = 170 Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Length = 204 Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Length = 172 Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} Length = 166 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query329
1ekj_A221 Beta-carbonic anhydrase; rossman fold domain, stra 100.0
3qy1_A223 Carbonic anhydrase; structural genomics, center fo 100.0
1ym3_A215 Carbonic anhydrase (carbonate dehydratase) (carbo 100.0
3e3i_A229 Carbonic anhydrase 2, beta carbonic anhydrase; all 100.0
2w3q_A243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 100.0
3ucj_A227 Carbonic anhydrase; alpha/beta, strand exchange, l 100.0
3eyx_A216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 100.0
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 100.0
1ddz_A496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 100.0
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 100.0
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 100.0
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 100.0
3teo_A204 Carbon disulfide hydrolase; beta carbonic anhydras 100.0
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Back     alignment and structure
Probab=100.00  E-value=1.2e-59  Score=431.99  Aligned_cols=214  Identities=81%  Similarity=1.348  Sum_probs=189.8

Q ss_pred             CChHHHHHHHHHHHHHHHhhhccCChhhHHhhhcCCCCcEEEEeecCCCCChhhhcCCCCCceEEEeccCCcCCCCCCCc
Q 020195          109 TKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTK  188 (329)
Q Consensus       109 ~~p~~~l~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~Pk~lVItCsDSRV~Pe~ifg~~pGD~FVvRNaGN~V~~~d~~~  188 (329)
                      ++|++++++|++||++|+++++.+++++|++|+++|+|+++||+||||||+|+.+||++|||+||+||+||+|+++|.+.
T Consensus         8 ~~p~~~l~~L~~gN~~f~~~~~~~~~~~~~~La~gQ~P~~lvi~CsDSRV~pe~i~~~~pGdlFVvRNaGN~V~~~d~~~   87 (221)
T 1ekj_A            8 IPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAK   87 (221)
T ss_dssp             ----CHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCCCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTTT
T ss_pred             CCHHHHHHHHHHHHHHHHhcCcccCHHHHHhhccCCCCcEEEEEeCCCCCCHHHHhCCCCCcEEEEeccCcccCcccccc
Confidence            67889999999999999999988899999999999999999999999999999999999999999999999999987654


Q ss_pred             ccchhhhHHHHHHHhhhhhhccCcceEEEeccCCCCcccccccccCCCCCCchhHHHHHHcccchhhhhhhhcCCCCccc
Q 020195          189 YAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGD  268 (329)
Q Consensus       189 ~~~v~asLEYAV~~L~~~~~~~~V~~IVV~GHT~CGav~A~~~~~~~g~~~~~~I~~wl~~~~pa~~~~~~~~~~~~~~e  268 (329)
                      ++++++||||||.+|+       |++|||||||+|||++|++...+++....+++++|++.+.|++.......+..++.+
T Consensus        88 ~~~~~asleyAv~~L~-------v~~IvV~GHs~CGav~Aa~~~~~~~~~~~~~i~~wl~~~~~~~~~~~~~~~~~~~~~  160 (221)
T 1ekj_A           88 YAGTGAAIEYAVLHLK-------VSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAE  160 (221)
T ss_dssp             CHHHHHHHHHHHHTSC-------CSEEEEEEESSCHHHHHHHHCCCSSCCCSSSHHHHHGGGHHHHHHHHHHSTTSCHHH
T ss_pred             cchhHHHHHHHHHhcC-------CCEEEEEccCCCCceeeecccccccccchHHHHHHHHhhhhHHHHHHhhccCCCHHH
Confidence            5578899999999999       999999999999999999876554444567999999998888765555444445555


Q ss_pred             cccHHHHHHHHHHHHHHhcChhHHhhhcCCceEEEEEEEEccCCeEEEEeccCCCCCCCCC
Q 020195          269 QCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV  329 (329)
Q Consensus       269 ~~~~~~~enV~~qV~~L~s~P~V~~~v~~~~L~V~G~vYDi~TG~v~~v~~d~~~~~~~~~  329 (329)
                      .+..++++||++||++|++||+|++++++|+|.||||+||++||+|+++++|.+.+|+++|
T Consensus       161 ~~~~~~~~nV~~~v~~L~~~p~v~~~~~~g~l~v~G~~ydi~tG~v~~~~~~~~~~~~~~~  221 (221)
T 1ekj_A          161 LCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV  221 (221)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSHHHHHHHHTTSCEEEEEEEETTTTEEEEEEECCCCCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCcEEEEEEEECCCCeEEEEecCCCCCccccC
Confidence            5667888999999999999999999999999999999999999999999999999999986
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} SCOP: c.53.2.1 PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Back     alignment and structure
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Back     alignment and structure
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} SCOP: c.53.2.1 PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Back     alignment and structure
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Back     alignment and structure
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} SCOP: c.53.2.0 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 329
d1ekja_210 c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum 1e-69
d1ddza2239 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red 7e-57
d1i6pa_214 c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia 3e-49
d1ddza1242 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red a 3e-46
d1g5ca_169 c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Me 5e-30
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Length = 210 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Pea (Pisum sativum) [TaxId: 3888]

 Score =  214 bits (545), Expect = 1e-69
 Identities = 173/217 (79%), Positives = 189/217 (87%), Gaps = 7/217 (3%)

Query: 113 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAF 172
           ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAF
Sbjct: 1   EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAF 60

Query: 173 VVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSF 232
           VVRNVAN+VPPYDQ KYAG GAA+EYAVLHLK       VSNIVVIGHSACGGIKGL+SF
Sbjct: 61  VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLK-------VSNIVVIGHSACGGIKGLLSF 113

Query: 233 TFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVR 292
            FDG  STDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFVR
Sbjct: 114 PFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVR 173

Query: 293 EGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 329
           EGLVNKTLALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 174 EGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV 210
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 239 Back     information, alignment and structure
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Length = 214 Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 242 Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 169 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query329
d1ekja_210 beta-carbonic anhydrase {Pea (Pisum sativum) [TaxI 100.0
d1ddza2239 beta-carbonic anhydrase {Red alga (Porphyridium pu 100.0
d1i6pa_214 beta-carbonic anhydrase {Escherichia coli [TaxId: 100.0
d1ddza1242 beta-carbonic anhydrase {Red alga (Porphyridium pu 100.0
d1g5ca_169 beta-carbonic anhydrase {Archaeon Methanobacterium 100.0
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Pea (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=5.7e-59  Score=420.71  Aligned_cols=210  Identities=82%  Similarity=1.381  Sum_probs=192.9

Q ss_pred             HHHHHHHHHHHHHHhhhccCChhhHHhhhcCCCCcEEEEeecCCCCChhhhcCCCCCceEEEeccCCcCCCCCCCcccch
Q 020195          113 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGV  192 (329)
Q Consensus       113 ~~l~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~Pk~lVItCsDSRV~Pe~ifg~~pGD~FVvRNaGN~V~~~d~~~~~~v  192 (329)
                      +++++|++||+||++.++.+++++|++|++||+|+++|||||||||+|+.+||.+|||+||+||+||+|+++|...+.++
T Consensus         1 ~a~e~l~~G~~~f~~~~~~~~~~~~~~l~~gQ~P~~~vi~C~DSRv~~e~if~~~~GdlfvvRnaGn~v~~~~~~~~~~~   80 (210)
T d1ekja_           1 EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGT   80 (210)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCCCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTTTCHHH
T ss_pred             ChHHHHHHHHHHHHhCccccCHHHHHHHhcCCCCceEEEeccccCCChhhhccCCCCcEEEEeccCCccCccccccchhh
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999876656779


Q ss_pred             hhhHHHHHHHhhhhhhccCcceEEEeccCCCCcccccccccCCCCCCchhHHHHHHcccchhhhhhhhcCCCCccccccH
Q 020195          193 GAAVEYAVLHLKCRLILLQVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTY  272 (329)
Q Consensus       193 ~asLEYAV~~L~~~~~~~~V~~IVV~GHT~CGav~A~~~~~~~g~~~~~~I~~wl~~~~pa~~~~~~~~~~~~~~e~~~~  272 (329)
                      ++|||||+.+|+       |++|||||||+||||+|+++....+....+++..|+..+.|+..............+....
T Consensus        81 ~~sleyav~~l~-------v~~IVVlGHt~CGav~Aa~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~  153 (210)
T d1ekja_          81 GAAIEYAVLHLK-------VSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTH  153 (210)
T ss_dssp             HHHHHHHHHTSC-------CSEEEEEEESSCHHHHHHHHCCCSSCCCSSSHHHHHGGGHHHHHHHHHHSTTSCHHHHHHH
T ss_pred             HHHHHhhhhcCC-------ceEEEEEcCcchHHHHHhhhhhhccCccCchHHHHHHHHHHHHHHHhhccccchHHHHHHH
Confidence            999999999999       9999999999999999998876666666779999999998888776665555555566677


Q ss_pred             HHHHHHHHHHHHHhcChhHHhhhcCCceEEEEEEEEccCCeEEEEeccCCCCCCCCC
Q 020195          273 CEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV  329 (329)
Q Consensus       273 ~~~enV~~qV~~L~s~P~V~~~v~~~~L~V~G~vYDi~TG~v~~v~~d~~~~~~~~~  329 (329)
                      ++++||++|+++|++||+|++++++|+|.|||||||++||+|++++.+++.++++++
T Consensus       154 ~~~~nV~~~v~~L~~~p~I~~~v~~g~l~I~G~vYDi~tG~v~~~~~~~g~~~~~~~  210 (210)
T d1ekja_         154 CEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV  210 (210)
T ss_dssp             HHHHHHHHHHHHHTTSHHHHHHHHTTSCEEEEEEEETTTTEEEEEEECCCCCCCCCC
T ss_pred             HHHHHHHHHHHHHHcCHHHHHHHHcCCeEEEEEEEECCCcEEEEEeccCCCCCCCCC
Confidence            889999999999999999999999999999999999999999999999999999986
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure