Citrus Sinensis ID: 020208


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
MRRYEDIPHWWFYLMLVVTLVVSLVLCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITATTNQTPGLNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRSMFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGLSWWGTEGEHCDLATCPTAKGILVDGCPVN
ccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcEEEEEEEcccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccc
ccccccccHHHHHHHHHHHHHHHHHHHHHccHHcccHHHHHHHHHHHHHHHHccHEEEEEEcccccccEHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHccccccccccccEEEEEEEEEEEEcccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEcccccc
mrryedipHWWFYLMLVVTLVVSLVLCTFlkdqvqmpwWGLLFAGAMAFVFTLPISIITattnqtpglniITEYVMgiiypgrpiaNVCFKVYGYMSVAQAVSFLNDfklghymkipprsmFLVQFIGTVLAGTINLAVAWWLLNSIEnicqdellppdspwtcpgdrvffdASVIWglvgpkrifgsqgnypamnwfFVGGALGPVLVWLLHkafpkqswiplinlpvllgatgmmppatavnynswIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGmedkglswwgtegehcdlatcptakgilvdgcpvn
mrryediphWWFYLMLVVTLVVSLVLCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITattnqtpglNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRSMFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGLSWWGTEGEHCDLATCPtakgilvdgcpvn
MRRYEDIPHWWFYlmlvvtlvvslvlCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITATTNQTPGLNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRSMFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGLSWWGTEGEHCDLATCPTAKGILVDGCPVN
****EDIPHWWFYLMLVVTLVVSLVLCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITATTNQTPGLNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRSMFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGLSWWGTEGEHCDLATCPTAKGILVDGC***
*RRYEDIPHWWFYLMLVVTLVVSLVLCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITATTNQTPGLNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRSMFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGLSWWGTEGEHCDLATCPTAKGILVDGCPV*
MRRYEDIPHWWFYLMLVVTLVVSLVLCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITATTNQTPGLNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRSMFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGLSWWGTEGEHCDLATCPTAKGILVDGCPVN
**RYEDIPHWWFYLMLVVTLVVSLVLCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITATTNQTPGLNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRSMFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGLSWWGTEGEHCDLATCPTAKGILVDGCPVN
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
ooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
oooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRRYEDIPHWWFYLMLVVTLVVSLVLCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITATTNQTPGLNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRSMFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGLSWWGTEGEHCDLATCPTAKGILVDGCPVN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query329 2.2.26 [Sep-21-2011]
Q9FME8729 Oligopeptide transporter yes no 1.0 0.451 0.860 1e-175
O04514734 Oligopeptide transporter no no 0.996 0.446 0.744 1e-152
O82485766 Oligopeptide transporter no no 0.987 0.424 0.579 1e-119
Q9T095736 Oligopeptide transporter no no 0.993 0.444 0.568 1e-115
Q9FJD1733 Oligopeptide transporter no no 0.993 0.446 0.547 1e-115
O23482737 Oligopeptide transporter no no 0.996 0.445 0.567 1e-113
Q9FJD2741 Oligopeptide transporter no no 0.993 0.441 0.556 1e-112
Q9SUA4753 Oligopeptide transporter no no 0.993 0.434 0.544 1e-110
Q9FG72755 Oligopeptide transporter no no 0.993 0.433 0.547 1e-110
P40900785 Sexual differentiation pr yes no 0.966 0.405 0.381 1e-64
>sp|Q9FME8|OPT4_ARATH Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=2 SV=1 Back     alignment and function desciption
 Score =  613 bits (1580), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 283/329 (86%), Positives = 308/329 (93%)

Query: 1   MRRYEDIPHWWFYLMLVVTLVVSLVLCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITA 60
           M+RY+DIP WWFY ML  TL++SL LC FL D+VQMPWWGL+FA AMAFVFTLPISIITA
Sbjct: 401 MKRYKDIPSWWFYSMLAATLLISLALCVFLNDEVQMPWWGLVFASAMAFVFTLPISIITA 460

Query: 61  TTNQTPGLNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRS 120
           TTNQTPGLNIITEY MG+IYPGRPIANVCFKVYGYMS+AQAVSFLNDFKLGHYMKIPPRS
Sbjct: 461 TTNQTPGLNIITEYAMGLIYPGRPIANVCFKVYGYMSMAQAVSFLNDFKLGHYMKIPPRS 520

Query: 121 MFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLV 180
           MFLVQFIGT+LAGTIN+ VAWW LNSI+NICQ+ELLPP+SPWTCPGDRVFFDASVIWGLV
Sbjct: 521 MFLVQFIGTILAGTINITVAWWQLNSIKNICQEELLPPNSPWTCPGDRVFFDASVIWGLV 580

Query: 181 GPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPA 240
           GPKRIFGSQGNY AMNWFF+GGALGPV+VW LHKAFPK+SWIPL+NLPVLLGAT MMPPA
Sbjct: 581 GPKRIFGSQGNYAAMNWFFLGGALGPVIVWSLHKAFPKRSWIPLVNLPVLLGATAMMPPA 640

Query: 241 TAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGL 300
           TAVNYNSWI+VGTIFN F+FRYRK WWQRYNY+LSAAMDAGVAFMAV+LYFSVGME+K L
Sbjct: 641 TAVNYNSWILVGTIFNLFVFRYRKSWWQRYNYVLSAAMDAGVAFMAVLLYFSVGMEEKSL 700

Query: 301 SWWGTEGEHCDLATCPTAKGILVDGCPVN 329
            WWGT GEHCDLA CPTA+G++VDGCPV 
Sbjct: 701 DWWGTRGEHCDLAKCPTARGVIVDGCPVK 729




Involved in the translocation of tetra- and pentapeptides across the cellular membrane in an energy-dependent manner.
Arabidopsis thaliana (taxid: 3702)
>sp|O04514|OPT2_ARATH Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 Back     alignment and function description
>sp|O82485|OPT7_ARATH Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9T095|OPT6_ARATH Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJD1|OPT8_ARATH Oligopeptide transporter 8 OS=Arabidopsis thaliana GN=OPT8 PE=2 SV=1 Back     alignment and function description
>sp|O23482|OPT3_ARATH Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 Back     alignment and function description
>sp|Q9FJD2|OPT9_ARATH Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 Back     alignment and function description
>sp|Q9SUA4|OPT5_ARATH Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 Back     alignment and function description
>sp|Q9FG72|OPT1_ARATH Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 Back     alignment and function description
>sp|P40900|ISP4_SCHPO Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
225429224 744 PREDICTED: oligopeptide transporter 4 is 1.0 0.442 0.878 1e-176
359475580 751 PREDICTED: oligopeptide transporter 4 is 1.0 0.438 0.878 1e-176
296088079 693 unnamed protein product [Vitis vinifera] 1.0 0.474 0.878 1e-176
147835342 583 hypothetical protein VITISV_038682 [Viti 1.0 0.564 0.875 1e-175
21592665 729 Isp4-like protein [Arabidopsis thaliana] 1.0 0.451 0.860 1e-173
15237689 729 oligopeptide transporter 4 [Arabidopsis 1.0 0.451 0.860 1e-173
224103837 752 oligopeptide transporter OPT family [Pop 0.993 0.434 0.877 1e-173
297797459 729 hypothetical protein ARALYDRAFT_496649 [ 1.0 0.451 0.860 1e-173
255554579 754 Oligopeptide transporter, putative [Rici 1.0 0.436 0.860 1e-172
118485952 436 unknown [Populus trichocarpa] 0.993 0.75 0.877 1e-172
>gi|225429224|ref|XP_002263530.1| PREDICTED: oligopeptide transporter 4 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 289/329 (87%), Positives = 315/329 (95%)

Query: 1   MRRYEDIPHWWFYLMLVVTLVVSLVLCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITA 60
           MRRY DIP WWFYL+LVVT+ VSL LC FL D+VQMPWWGL+FA AMAF+FTLPISIITA
Sbjct: 416 MRRYADIPSWWFYLLLVVTIAVSLALCIFLNDEVQMPWWGLIFAAAMAFIFTLPISIITA 475

Query: 61  TTNQTPGLNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRS 120
           TTNQTPGLNIITEYVMG+I PGRPIANVCFK YGYMS+AQAVSFLNDFKLGHYMKIPPRS
Sbjct: 476 TTNQTPGLNIITEYVMGVILPGRPIANVCFKTYGYMSMAQAVSFLNDFKLGHYMKIPPRS 535

Query: 121 MFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLV 180
           MFLVQFIGT+LAGTIN+AVAWWLL +I+NICQDELLPPDSPWTCPGDRVFFDASVIWGLV
Sbjct: 536 MFLVQFIGTILAGTINIAVAWWLLTTIKNICQDELLPPDSPWTCPGDRVFFDASVIWGLV 595

Query: 181 GPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPA 240
           GPKRIFGS GNYP+MNWFF+GGALGPV+VW+ HKAFPKQSWIPLINLPVLLGAT MMPPA
Sbjct: 596 GPKRIFGSLGNYPSMNWFFLGGALGPVVVWVFHKAFPKQSWIPLINLPVLLGATSMMPPA 655

Query: 241 TAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGL 300
           T++NYNSWI+VGTIFNFF+FRYRKQWWQRYNYILSAAMDAGVAFMAV+LYFS+G+E+KGL
Sbjct: 656 TSLNYNSWILVGTIFNFFVFRYRKQWWQRYNYILSAAMDAGVAFMAVLLYFSLGIEEKGL 715

Query: 301 SWWGTEGEHCDLATCPTAKGILVDGCPVN 329
           +WWGT+GEHC LATCPTAKGI+VDGCPVN
Sbjct: 716 TWWGTDGEHCKLATCPTAKGIVVDGCPVN 744




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475580|ref|XP_003631708.1| PREDICTED: oligopeptide transporter 4 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088079|emb|CBI35438.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147835342|emb|CAN61122.1| hypothetical protein VITISV_038682 [Vitis vinifera] Back     alignment and taxonomy information
>gi|21592665|gb|AAM64614.1| Isp4-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15237689|ref|NP_201246.1| oligopeptide transporter 4 [Arabidopsis thaliana] gi|67460974|sp|Q9FME8.1|OPT4_ARATH RecName: Full=Oligopeptide transporter 4; Short=AtOPT4 gi|9759417|dbj|BAB09872.1| Isp4-like protein [Arabidopsis thaliana] gi|20466754|gb|AAM20694.1| Isp4-like protein [Arabidopsis thaliana] gi|23198262|gb|AAN15658.1| Isp4-like protein [Arabidopsis thaliana] gi|110742320|dbj|BAE99084.1| Isp4-like protein [Arabidopsis thaliana] gi|332010507|gb|AED97890.1| oligopeptide transporter 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224103837|ref|XP_002313213.1| oligopeptide transporter OPT family [Populus trichocarpa] gi|222849621|gb|EEE87168.1| oligopeptide transporter OPT family [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297797459|ref|XP_002866614.1| hypothetical protein ARALYDRAFT_496649 [Arabidopsis lyrata subsp. lyrata] gi|297312449|gb|EFH42873.1| hypothetical protein ARALYDRAFT_496649 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255554579|ref|XP_002518328.1| Oligopeptide transporter, putative [Ricinus communis] gi|223542548|gb|EEF44088.1| Oligopeptide transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|118485952|gb|ABK94821.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
TAIR|locus:2173408729 OPT4 "AT5G64410" [Arabidopsis 0.996 0.449 0.841 1.3e-162
TAIR|locus:2024372734 OPT2 "oligopeptide transporter 0.996 0.446 0.723 2.9e-142
TAIR|locus:2132736766 OPT7 "AT4G10770" [Arabidopsis 0.987 0.424 0.576 3.9e-115
TAIR|locus:2137727736 OPT6 "oligopeptide transporter 0.993 0.444 0.565 1e-109
TAIR|locus:2168616741 OPT9 "oligopeptide transporter 0.993 0.441 0.550 2.1e-109
TAIR|locus:2168626733 OPT8 "oligopeptide transporter 0.993 0.446 0.538 2.6e-109
TAIR|locus:2133882753 OPT5 "oligopeptide transporter 0.993 0.434 0.534 5.1e-106
TAIR|locus:2178398755 OPT1 "AT5G55930" [Arabidopsis 0.993 0.433 0.537 6.5e-106
POMBASE|SPBC29B5.02c785 isp4 "OPT oligopeptide transpo 0.914 0.383 0.386 3.1e-67
CGD|CAL0003352783 OPT1 [Candida albicans (taxid: 0.911 0.383 0.394 1.8e-64
TAIR|locus:2173408 OPT4 "AT5G64410" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1583 (562.3 bits), Expect = 1.3e-162, P = 1.3e-162
 Identities = 276/328 (84%), Positives = 299/328 (91%)

Query:     1 MRRYEDIPHWWFYXXXXXXXXXXXXXCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITA 60
             M+RY+DIP WWFY             C FL D+VQMPWWGL+FA AMAFVFTLPISIITA
Sbjct:   401 MKRYKDIPSWWFYSMLAATLLISLALCVFLNDEVQMPWWGLVFASAMAFVFTLPISIITA 460

Query:    61 TTNQTPGLNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRS 120
             TTNQTPGLNIITEY MG+IYPGRPIANVCFKVYGYMS+AQAVSFLNDFKLGHYMKIPPRS
Sbjct:   461 TTNQTPGLNIITEYAMGLIYPGRPIANVCFKVYGYMSMAQAVSFLNDFKLGHYMKIPPRS 520

Query:   121 MFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLV 180
             MFLVQFIGT+LAGTIN+ VAWW LNSI+NICQ+ELLPP+SPWTCPGDRVFFDASVIWGLV
Sbjct:   521 MFLVQFIGTILAGTINITVAWWQLNSIKNICQEELLPPNSPWTCPGDRVFFDASVIWGLV 580

Query:   181 GPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPA 240
             GPKRIFGSQGNY AMNWFF+GGALGPV+VW LHKAFPK+SWIPL+NLPVLLGAT MMPPA
Sbjct:   581 GPKRIFGSQGNYAAMNWFFLGGALGPVIVWSLHKAFPKRSWIPLVNLPVLLGATAMMPPA 640

Query:   241 TAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGL 300
             TAVNYNSWI+VGTIFN F+FRYRK WWQRYNY+LSAAMDAGVAFMAV+LYFSVGME+K L
Sbjct:   641 TAVNYNSWILVGTIFNLFVFRYRKSWWQRYNYVLSAAMDAGVAFMAVLLYFSVGMEEKSL 700

Query:   301 SWWGTEGEHCDLATCPTAKGILVDGCPV 328
              WWGT GEHCDLA CPTA+G++VDGCPV
Sbjct:   701 DWWGTRGEHCDLAKCPTARGVIVDGCPV 728




GO:0015198 "oligopeptide transporter activity" evidence=IGI;ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0006857 "oligopeptide transport" evidence=IGI;RCA
GO:0016020 "membrane" evidence=ISS
GO:0080167 "response to karrikin" evidence=IEP
TAIR|locus:2024372 OPT2 "oligopeptide transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132736 OPT7 "AT4G10770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137727 OPT6 "oligopeptide transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168616 OPT9 "oligopeptide transporter 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168626 OPT8 "oligopeptide transporter 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133882 OPT5 "oligopeptide transporter 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178398 OPT1 "AT5G55930" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPBC29B5.02c isp4 "OPT oligopeptide transporter family Isp4" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
CGD|CAL0003352 OPT1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FME8OPT4_ARATHNo assigned EC number0.86011.00.4513yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00005733001
SubName- Full=Chromosome chr3 scaffold_157, whole genome shotgun sequence; (744 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
TIGR00728606 TIGR00728, OPT_sfam, oligopeptide transporter, OPT 8e-87
TIGR00727681 TIGR00727, ISP4_OPT, small oligopeptide transporte 7e-84
pfam03169619 pfam03169, OPT, OPT oligopeptide transporter prote 1e-82
>gnl|CDD|233105 TIGR00728, OPT_sfam, oligopeptide transporter, OPT superfamily Back     alignment and domain information
 Score =  272 bits (697), Expect = 8e-87
 Identities = 129/296 (43%), Positives = 189/296 (63%), Gaps = 14/296 (4%)

Query: 1   MRRYEDIPHWWFYLMLVVTLVVSLVLCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITA 60
           ++ Y+++P WW+  +L+V+  + +V+  +     Q+PWWG++ A  +A V  +PI I+  
Sbjct: 322 VKNYKEVPAWWYLSLLLVSFGLGIVVVEYYFGITQLPWWGVIVALIIALVLAIPIGILAG 381

Query: 61  TTNQTPGLNIITEYVMGIIYPGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRS 120
            TN   GLNIITE ++G I PGRP+AN+ FK YG+++  QA  F+ D K GHYMK PPR+
Sbjct: 382 ITNPVSGLNIITELIIGYILPGRPLANLAFKAYGFITAQQAGDFMQDLKTGHYMKAPPRA 441

Query: 121 MFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDSPWTCPGDRVFFDASVIWGLV 180
            F  Q IGT++   +N  V  WL ++I N         ++ +TCP   VFF+AS+IWG++
Sbjct: 442 QFAAQLIGTIVGSLVNAPVLEWLYHAIGN--------QNNNFTCPNALVFFNASLIWGVI 493

Query: 181 GPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPA 240
           GPK IF  +G Y  + WFF+ G +G VLVWL+ K FPK  WI  IN PV +G    +PPA
Sbjct: 494 GPK-IFSGKGLYCGLMWFFLVG-VGAVLVWLVRKLFPK--WIKYINPPVAVGGGIYIPPA 549

Query: 241 TAVNYNSWIIVGTIFNFFIF-RYRKQW-WQRYNYILSAAMDAGVAFMAVILYFSVG 294
           TAVNY++W  VG  FN+    R+R +   ++YNY+L+A + AG A   VI++F +G
Sbjct: 550 TAVNYSTWGAVGGFFNYRWRKRHRARKNAEKYNYVLAAGLIAGEALAGVIIFFCLG 605


This superfamily has two main branches. One branch contains a tetrapeptide transporter demonstrated experimentally in three different species of yeast. The other family contains EspB of Myxococcus xanthus, a protein required for normal rather than delayed sporulation after cellular aggregation; its role is unknown but is compatible with transport of a signalling molecule. Homology between the two branches of the superfamily is seen most easily at the ends of the protein. The central regions are poorly conserved within each branch and may not be homologous between branches. Length = 606

>gnl|CDD|129810 TIGR00727, ISP4_OPT, small oligopeptide transporter, OPT family Back     alignment and domain information
>gnl|CDD|217401 pfam03169, OPT, OPT oligopeptide transporter protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 329
KOG2262761 consensus Sexual differentiation process protein I 100.0
TIGR00727681 ISP4_OPT small oligopeptide transporter, OPT famil 100.0
TIGR00728654 OPT_sfam oligopeptide transporters, OPT superfamil 100.0
PF03169624 OPT: OPT oligopeptide transporter protein; InterPr 100.0
TIGR00733591 putative oligopeptide transporter, OPT family. Thi 100.0
COG1297624 Predicted membrane protein [Function unknown] 99.93
PF03169 624 OPT: OPT oligopeptide transporter protein; InterPr 90.15
>KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms] Back     alignment and domain information
Probab=100.00  E-value=8.8e-89  Score=672.17  Aligned_cols=326  Identities=67%  Similarity=1.325  Sum_probs=318.4

Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHHHHhhhhheeeeecCCchhHHHHHHHHHHhc
Q 020208            1 MRRYEDIPHWWFYLMLVVTLVVSLVLCTFLKDQVQMPWWGLLFAGAMAFVFTLPISIITATTNQTPGLNIITEYVMGIIY   80 (329)
Q Consensus         1 m~~y~~vP~ww~~~~~v~~~~~~~~~~~~~~~~~~lp~~~~lla~~l~~i~~~~~g~~~g~t~~~p~~~~isqli~g~~~   80 (329)
                      ||||||||.|||++.+++++++++++|+.|+++.|+|||++++|+++++++++|.|+++|+||++|++|+++|+|.||+.
T Consensus       435 MkkYKeVP~WWf~~ili~s~~l~~~~~~~~~~~~q~PwWg~~va~~ia~vf~iPigii~AtTNq~~GLNiitE~i~Gy~~  514 (761)
T KOG2262|consen  435 MKKYKEVPDWWFLAILIVSLGLGLAACEGYKTQVQLPWWGLLVACAIAFVFTIPIGIIQATTNQTPGLNIITEYIIGYIY  514 (761)
T ss_pred             HHHhccCcHHHHHHHHHHHHHHHhhheeeecccccCchHHHHHHHHHHHHHhccHHHhhhhccCCccHHHHHHHHHHhhc
Confidence            78999999999999999999999999999999889999999999999999999999999999999999999999999999


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCC
Q 020208           81 PGRPIANVCFKVYGYMSVAQAVSFLNDFKLGHYMKIPPRSMFLVQFIGTVLAGTINLAVAWWLLNSIENICQDELLPPDS  160 (329)
Q Consensus        81 pg~~~~n~~f~~~~~~~~~qa~~~~~DlK~G~yl~~pPr~~f~~QiiGtivg~~v~~~v~~~~~~~~~~~~~~~~l~~~~  160 (329)
                      ||+|+|||+||.||+++++||+.++||||+|||||+|||.||.+|++||+++++|+.+|..|++.+++|+|+.+   +++
T Consensus       515 PgrPiAn~~FK~yGyism~Qal~f~~DlKlghYMKIPPR~mF~~Q~v~tivs~~Vn~gv~~W~m~~I~~iC~~~---~~s  591 (761)
T KOG2262|consen  515 PGRPIANLCFKTYGYISMTQALTFLQDLKLGHYMKIPPRSMFAVQLVGTIVAGFVNLGVAWWLMYSIPNICTTD---QNS  591 (761)
T ss_pred             CCchHHHHHHHHhchhhHHHHHHHHhhccceeeecCChHHHHHHHHHHHHhheeeeHHhHHHHHhcccccccCC---CCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999966   788


Q ss_pred             CcccchhHHHHHhHHHhHhhccccccCCCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCccccChHHHHHHhcccccc
Q 020208          161 PWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYPAMNWFFVGGALGPVLVWLLHKAFPKQSWIPLINLPVLLGATGMMPPA  240 (329)
Q Consensus       161 ~~~~p~~~~~~~~si~wg~~gp~~lf~~g~~y~~~~~~~~iG~~~~i~~~l~~r~~P~~~~~~~i~~pv~~~g~~~~~p~  240 (329)
                      +|+||..++++++|++||++||+|+|+++++|+.+.|+|++|+++|+++|+++|++||++|.+++|.|++++|.+.+||+
T Consensus       592 ~~TCP~~rvffnASvIWGlIGP~riF~~~g~Y~~l~wFFLiGa~~pv~vw~~~k~fPk~~w~~~i~~pvl~gg~~~mPpa  671 (761)
T KOG2262|consen  592 PWTCPSDRVFFNASVIWGLIGPKRIFGSLGIYPGLNWFFLIGALAPVLVWLLQKKFPKKKWIKQINPPVLFGGTANMPPA  671 (761)
T ss_pred             CccCCCCceEEeceeeeecccchhhcCCCCccCcchHHHHHHHHhhHHHHHHHHhcchhhhhhccCcceEecccccCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999899999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhcChhhhhhhhhhhhhhhHhhHHHHHHHHHHHHhcCCCCccccCCCCC-CCCCCCCCCCC
Q 020208          241 TAVNYNSWIIVGTIFNFFIFRYRKQWWQRYNYILSAAMDAGVAFMAVILYFSVGMEDKGLSWWGTEGE-HCDLATCPTAK  319 (329)
Q Consensus       241 ~~~~~~~~~~vG~~~~~~~rr~~~~w~~ky~~~laagL~aG~~i~~vi~~fa~~~~g~~~~wwGn~~~-~~~~~~~~~~~  319 (329)
                      +..||++++++|+++|+++|||+++||+||||++|||||+|.++++++++|++|++|...+||||+++ +|+..+|+..+
T Consensus       672 t~vny~sw~iv~fifny~i~r~~~~WW~kYNyvLsaaldaG~a~~~vliffcv~~~~~~~~WWGn~~~~~c~~a~cp~~~  751 (761)
T KOG2262|consen  672 TAVNYTSWAIVGFIFNYYIFRYRRSWWQKYNYVLSAALDAGVAFMGVLIFFCVQYPGISLNWWGNTVSAGCDLAGCPTAK  751 (761)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhhcccchhHHHhHhhheeccCCCccccccCcCCCCCCccCCCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999964 89999999999


Q ss_pred             ccccCCCCCC
Q 020208          320 GILVDGCPVN  329 (329)
Q Consensus       320 ~~~~~~~~~~  329 (329)
                      +..++++|.|
T Consensus       752 ~v~~~~~~~f  761 (761)
T KOG2262|consen  752 GVVVSGCPVF  761 (761)
T ss_pred             eeecCCCCCC
Confidence            9888887764



>TIGR00727 ISP4_OPT small oligopeptide transporter, OPT family Back     alignment and domain information
>TIGR00728 OPT_sfam oligopeptide transporters, OPT superfamily Back     alignment and domain information
>PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast Back     alignment and domain information
>TIGR00733 putative oligopeptide transporter, OPT family Back     alignment and domain information
>COG1297 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00