Citrus Sinensis ID: 020215
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 329 | 2.2.26 [Sep-21-2011] | |||||||
| Q8LDW8 | 331 | Probable hydroxyacylgluta | yes | no | 0.996 | 0.990 | 0.736 | 1e-147 | |
| Q9SID3 | 324 | Hydroxyacylglutathione hy | no | no | 0.984 | 1.0 | 0.735 | 1e-145 | |
| O24495 | 331 | Hydroxyacylglutathione hy | no | no | 1.0 | 0.993 | 0.716 | 1e-140 | |
| Q60BX0 | 256 | Hydroxyacylglutathione hy | yes | no | 0.768 | 0.988 | 0.472 | 2e-70 | |
| Q4FP49 | 239 | Hydroxyacylglutathione hy | yes | no | 0.708 | 0.974 | 0.532 | 4e-69 | |
| Q92MF8 | 256 | Hydroxyacylglutathione hy | yes | no | 0.775 | 0.996 | 0.476 | 6e-69 | |
| Q5LNN5 | 255 | Hydroxyacylglutathione hy | yes | no | 0.768 | 0.992 | 0.492 | 1e-68 | |
| Q0AM20 | 256 | Hydroxyacylglutathione hy | yes | no | 0.775 | 0.996 | 0.468 | 4e-68 | |
| Q2JVC3 | 252 | Hydroxyacylglutathione hy | yes | no | 0.762 | 0.996 | 0.482 | 3e-67 | |
| A6WXE0 | 260 | Hydroxyacylglutathione hy | yes | no | 0.790 | 1.0 | 0.475 | 2e-66 |
| >sp|Q8LDW8|GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplast OS=Arabidopsis thaliana GN=GLX2-4 PE=2 SV=1 | Back alignment and function desciption |
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Score = 520 bits (1339), Expect = e-147, Method: Compositional matrix adjust.
Identities = 243/330 (73%), Positives = 287/330 (86%), Gaps = 2/330 (0%)
Query: 1 MQMISRASSAAMASFTCSRG-QSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASR 59
MQ IS+ SSAA + F CSR S CV P RQL +RKGL+ G M+L S P +TL A +
Sbjct: 1 MQAISKVSSAA-SFFRCSRKLVSQPCVRPCVRQLHVRKGLVSGVMKLFSSPLRTLRDAGK 59
Query: 60 SLRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKN 119
S+R++ FCS+SN+SSSLQIELVPCL DNYAY+LHD DTGTVGVVDPSEAVPV+DAL + +
Sbjct: 60 SVRISRFCSVSNVSSSLQIELVPCLTDNYAYILHDEDTGTVGVVDPSEAVPVMDALQKNS 119
Query: 120 RNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEV 179
RNLTYILNTHHH+DHTGGNLELK RYGAKVIGS D+DRIPGID+ L D DKWMFAGHEV
Sbjct: 120 RNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAADRDRIPGIDVALKDADKWMFAGHEV 179
Query: 180 HVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTN 239
H+++TPGHTRGHISFYFPG+ A+FTGDTLFSLSCGKLFEGTP QM +SLQ+I++LPDDT+
Sbjct: 180 HIMETPGHTRGHISFYFPGARAIFTGDTLFSLSCGKLFEGTPEQMLASLQRIIALPDDTS 239
Query: 240 VYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTS 299
VYCGHEYTLSNSKFALSIEP NE LQSYAA++A+LR K +PTIPTT+KMEK+CNPFLRT
Sbjct: 240 VYCGHEYTLSNSKFALSIEPTNEVLQSYAAYVAELRDKKLPTIPTTMKMEKACNPFLRTE 299
Query: 300 SPEIRQSLRIPDTADDSEALGVIRQAKDNF 329
+ +IR++L IP+TAD++EALG+IR+AKDNF
Sbjct: 300 NTDIRRALGIPETADEAEALGIIRRAKDNF 329
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Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: 6 |
| >sp|Q9SID3|GLO2N_ARATH Hydroxyacylglutathione hydrolase 2, mitochondrial OS=Arabidopsis thaliana GN=At2g31350 PE=1 SV=1 | Back alignment and function description |
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| >sp|O24495|GLO2M_ARATH Hydroxyacylglutathione hydrolase 1, mitochondrial OS=Arabidopsis thaliana GN=GLX2-1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q60BX0|GLO2_METCA Hydroxyacylglutathione hydrolase OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) GN=gloB PE=3 SV=1 | Back alignment and function description |
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| >sp|Q4FP49|GLO2_PELUB Hydroxyacylglutathione hydrolase OS=Pelagibacter ubique (strain HTCC1062) GN=gloB PE=3 SV=1 | Back alignment and function description |
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| >sp|Q92MF8|GLO2_RHIME Hydroxyacylglutathione hydrolase OS=Rhizobium meliloti (strain 1021) GN=gloB PE=3 SV=1 | Back alignment and function description |
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| >sp|Q5LNN5|GLO2_RUEPO Hydroxyacylglutathione hydrolase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=gloB PE=3 SV=1 | Back alignment and function description |
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| >sp|Q0AM20|GLO2_MARMM Hydroxyacylglutathione hydrolase OS=Maricaulis maris (strain MCS10) GN=gloB PE=3 SV=1 | Back alignment and function description |
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| >sp|Q2JVC3|GLO2_SYNJA Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain JA-3-3Ab) GN=gloB PE=3 SV=1 | Back alignment and function description |
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| >sp|A6WXE0|GLO2_OCHA4 Hydroxyacylglutathione hydrolase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gloB PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 329 | ||||||
| 224133230 | 328 | predicted protein [Populus trichocarpa] | 0.996 | 1.0 | 0.820 | 1e-160 | |
| 118485019 | 328 | unknown [Populus trichocarpa] | 0.996 | 1.0 | 0.817 | 1e-160 | |
| 224093054 | 328 | predicted protein [Populus trichocarpa] | 0.996 | 1.0 | 0.848 | 1e-159 | |
| 225433992 | 329 | PREDICTED: probable hydroxyacylglutathio | 0.996 | 0.996 | 0.845 | 1e-159 | |
| 359806489 | 329 | uncharacterized protein LOC100816314 [Gl | 0.996 | 0.996 | 0.826 | 1e-156 | |
| 225433994 | 321 | PREDICTED: probable hydroxyacylglutathio | 0.975 | 1.0 | 0.832 | 1e-155 | |
| 449484776 | 328 | PREDICTED: probable hydroxyacylglutathio | 0.996 | 1.0 | 0.802 | 1e-152 | |
| 449468882 | 328 | PREDICTED: probable hydroxyacylglutathio | 0.996 | 1.0 | 0.799 | 1e-151 | |
| 297743843 | 300 | unnamed protein product [Vitis vinifera] | 0.908 | 0.996 | 0.866 | 1e-150 | |
| 363806954 | 315 | uncharacterized protein LOC100819370 [Gl | 0.939 | 0.980 | 0.841 | 1e-150 |
| >gi|224133230|ref|XP_002327992.1| predicted protein [Populus trichocarpa] gi|222837401|gb|EEE75780.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 270/329 (82%), Positives = 299/329 (90%), Gaps = 1/329 (0%)
Query: 1 MQMISRASSAAMASFTCSRGQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASRS 60
MQMIS+AS AMAS CSR +SG+ V PG RQL LRK ++YGFMRLLS PFKTL ASR+
Sbjct: 1 MQMISKAS-CAMASLPCSRVRSGIRVRPGTRQLSLRKVIVYGFMRLLSTPFKTLRGASRT 59
Query: 61 LRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNR 120
L+VA+FCS+SNMSSSLQIELVPCL+DNYAYLLHD+DTGTVGV+DPSEA PVIDALSRKNR
Sbjct: 60 LKVAQFCSVSNMSSSLQIELVPCLKDNYAYLLHDVDTGTVGVIDPSEAAPVIDALSRKNR 119
Query: 121 NLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVH 180
NLTYILNTHHH+DHTGGN ELKARYGAKVIGSGVD+DRIPGIDIVLNDGD WMF GHEV
Sbjct: 120 NLTYILNTHHHYDHTGGNEELKARYGAKVIGSGVDRDRIPGIDIVLNDGDNWMFGGHEVL 179
Query: 181 VIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNV 240
V++TPGHTRGH+SFYFPGS A+F GDTLFSLSCGKLFEGTP QM SSL+KIMSLPDDTN+
Sbjct: 180 VMETPGHTRGHVSFYFPGSGAIFAGDTLFSLSCGKLFEGTPEQMLSSLRKIMSLPDDTNI 239
Query: 241 YCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSS 300
YCGHEYTLSNSKFALS++PNNEALQSYAAH+A LRSK +PTIPT +K+EK+CNPFLRTSS
Sbjct: 240 YCGHEYTLSNSKFALSVDPNNEALQSYAAHVAHLRSKSLPTIPTKLKVEKACNPFLRTSS 299
Query: 301 PEIRQSLRIPDTADDSEALGVIRQAKDNF 329
IR +L IP TA+DSEALGVIRQAKDNF
Sbjct: 300 TAIRHTLNIPATANDSEALGVIRQAKDNF 328
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118485019|gb|ABK94374.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224093054|ref|XP_002309787.1| predicted protein [Populus trichocarpa] gi|118483171|gb|ABK93490.1| unknown [Populus trichocarpa] gi|118485660|gb|ABK94680.1| unknown [Populus trichocarpa] gi|222852690|gb|EEE90237.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225433992|ref|XP_002271795.1| PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359806489|ref|NP_001241253.1| uncharacterized protein LOC100816314 [Glycine max] gi|255645837|gb|ACU23409.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|225433994|ref|XP_002271863.1| PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449484776|ref|XP_004156976.1| PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449468882|ref|XP_004152150.1| PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297743843|emb|CBI36726.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|363806954|ref|NP_001242566.1| uncharacterized protein LOC100819370 [Glycine max] gi|255636437|gb|ACU18557.1| unknown [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 329 | ||||||
| TAIR|locus:2198851 | 331 | GLX2-4 "glyoxalase 2-4" [Arabi | 0.996 | 0.990 | 0.681 | 2.5e-120 | |
| TAIR|locus:2061270 | 324 | GLX2-5 "glyoxalase 2-5" [Arabi | 0.984 | 1.0 | 0.680 | 6e-119 | |
| TAIR|locus:2058239 | 331 | GLX2-1 "glyoxalase 2-1" [Arabi | 0.954 | 0.948 | 0.697 | 2.1e-116 | |
| TIGR_CMR|SPO_3168 | 255 | SPO_3168 "hydroxyacylglutathio | 0.768 | 0.992 | 0.464 | 5.1e-58 | |
| UNIPROTKB|Q0BWR4 | 256 | gloB "Hydroxyacylglutathione h | 0.775 | 0.996 | 0.401 | 1.1e-48 | |
| TAIR|locus:2103232 | 258 | GLY2 [Arabidopsis thaliana (ta | 0.753 | 0.961 | 0.385 | 2.8e-43 | |
| UNIPROTKB|Q9KPX6 | 252 | gloB "Hydroxyacylglutathione h | 0.756 | 0.988 | 0.382 | 8.4e-42 | |
| TIGR_CMR|VC_2236 | 252 | VC_2236 "hydroxyacylglutathion | 0.756 | 0.988 | 0.382 | 8.4e-42 | |
| UNIPROTKB|P0AC84 | 251 | gloB "glyoxalase II" [Escheric | 0.759 | 0.996 | 0.368 | 3.3e-40 | |
| ZFIN|ZDB-GENE-030131-8921 | 303 | hagh "hydroxyacylglutathione h | 0.844 | 0.917 | 0.349 | 3.7e-39 |
| TAIR|locus:2198851 GLX2-4 "glyoxalase 2-4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
Identities = 225/330 (68%), Positives = 266/330 (80%)
Query: 1 MQMIXXXXXXXXXXFTCSRGQ-SGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASR 59
MQ I F CSR S CV P RQL +RKGL+ G M+L S P +TL A +
Sbjct: 1 MQAISKVSSAASF-FRCSRKLVSQPCVRPCVRQLHVRKGLVSGVMKLFSSPLRTLRDAGK 59
Query: 60 SLRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKN 119
S+R++ FCS+SN+SSSLQIELVPCL DNYAY+LHD DTGTVGVVDPSEAVPV+DAL + +
Sbjct: 60 SVRISRFCSVSNVSSSLQIELVPCLTDNYAYILHDEDTGTVGVVDPSEAVPVMDALQKNS 119
Query: 120 RNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEV 179
RNLTYI ELK RYGAKVIGS D+DRIPGID+ L D DKWMFAGHEV
Sbjct: 120 RNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAADRDRIPGIDVALKDADKWMFAGHEV 179
Query: 180 HVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTN 239
H+++TPGHTRGHISFYFPG+ A+FTGDTLFSLSCGKLFEGTP QM +SLQ+I++LPDDT+
Sbjct: 180 HIMETPGHTRGHISFYFPGARAIFTGDTLFSLSCGKLFEGTPEQMLASLQRIIALPDDTS 239
Query: 240 VYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTS 299
VYCGHEYTLSNSKFALSIEP NE LQSYAA++A+LR K +PTIPTT+KMEK+CNPFLRT
Sbjct: 240 VYCGHEYTLSNSKFALSIEPTNEVLQSYAAYVAELRDKKLPTIPTTMKMEKACNPFLRTE 299
Query: 300 SPEIRQSLRIPDTADDSEALGVIRQAKDNF 329
+ +IR++L IP+TAD++EALG+IR+AKDNF
Sbjct: 300 NTDIRRALGIPETADEAEALGIIRRAKDNF 329
|
|
| TAIR|locus:2061270 GLX2-5 "glyoxalase 2-5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2058239 GLX2-1 "glyoxalase 2-1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TIGR_CMR|SPO_3168 SPO_3168 "hydroxyacylglutathione hydrolase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q0BWR4 gloB "Hydroxyacylglutathione hydrolase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2103232 GLY2 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9KPX6 gloB "Hydroxyacylglutathione hydrolase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|VC_2236 VC_2236 "hydroxyacylglutathione hydrolase GloB, putative" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P0AC84 gloB "glyoxalase II" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-8921 hagh "hydroxyacylglutathione hydrolase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SID3 | GLO2N_ARATH | 3, ., 1, ., 2, ., 6 | 0.7355 | 0.9848 | 1.0 | no | no |
| O24495 | GLO2M_ARATH | 3, ., 1, ., 2, ., 6 | 0.7160 | 1.0 | 0.9939 | no | no |
| Q4FP49 | GLO2_PELUB | 3, ., 1, ., 2, ., 6 | 0.5321 | 0.7082 | 0.9748 | yes | no |
| Q8LDW8 | GLO2D_ARATH | 3, ., 1, ., 2, ., 6 | 0.7363 | 0.9969 | 0.9909 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.2 | 0.983 |
| 3rd Layer | 3.1.2.6 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_Genewise1_v1.C_640417 | SubName- Full=Putative uncharacterized protein; (328 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 329 | |||
| PLN02398 | 329 | PLN02398, PLN02398, hydroxyacylglutathione hydrola | 0.0 | |
| TIGR03413 | 248 | TIGR03413, GSH_gloB, hydroxyacylglutathione hydrol | 1e-136 | |
| PLN02469 | 258 | PLN02469, PLN02469, hydroxyacylglutathione hydrola | 2e-82 | |
| PRK10241 | 251 | PRK10241, PRK10241, hydroxyacylglutathione hydrola | 2e-72 | |
| smart00849 | 177 | smart00849, Lactamase_B, Metallo-beta-lactamase su | 6e-37 | |
| COG0491 | 252 | COG0491, GloB, Zn-dependent hydrolases, including | 1e-35 | |
| pfam00753 | 148 | pfam00753, Lactamase_B, Metallo-beta-lactamase sup | 5e-23 | |
| PLN02962 | 251 | PLN02962, PLN02962, hydroxyacylglutathione hydrola | 7e-16 | |
| COG0426 | 388 | COG0426, FpaA, Uncharacterized flavoproteins [Ener | 8e-04 | |
| PRK00685 | 228 | PRK00685, PRK00685, metal-dependent hydrolase; Pro | 0.002 |
| >gnl|CDD|215223 PLN02398, PLN02398, hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
Score = 669 bits (1727), Expect = 0.0
Identities = 279/330 (84%), Positives = 305/330 (92%), Gaps = 2/330 (0%)
Query: 1 MQMISRASSAAMASFTCSR-GQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASR 59
MQMIS+ASSA M+SF CSR + LCV PG RQLCLRK LLYG M+LLSMP KTL A R
Sbjct: 1 MQMISKASSA-MSSFRCSRRIRGQLCVRPGVRQLCLRKSLLYGVMKLLSMPLKTLRGAGR 59
Query: 60 SLRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKN 119
+L+VA+FCS+SN+SSSLQIELVPCL+DNYAYLLHD DTGTVGVVDPSEAVPVIDALSRKN
Sbjct: 60 TLKVAQFCSVSNVSSSLQIELVPCLKDNYAYLLHDEDTGTVGVVDPSEAVPVIDALSRKN 119
Query: 120 RNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEV 179
RNLTYILNTHHH+DHTGGNLELKARYGAKVIGS VDKDRIPGIDIVL DGDKWMFAGHEV
Sbjct: 120 RNLTYILNTHHHYDHTGGNLELKARYGAKVIGSAVDKDRIPGIDIVLKDGDKWMFAGHEV 179
Query: 180 HVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTN 239
V++TPGHTRGHISFYFPGS A+FTGDTLFSLSCGKLFEGTP QM SSLQKI+SLPDDTN
Sbjct: 180 LVMETPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTPEQMLSSLQKIISLPDDTN 239
Query: 240 VYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTS 299
+YCGHEYTLSNSKFALSIEPNNE LQSYAAH+A LRSKG+PTIPTT+KMEK+CNPFLRTS
Sbjct: 240 IYCGHEYTLSNSKFALSIEPNNEVLQSYAAHVAHLRSKGLPTIPTTVKMEKACNPFLRTS 299
Query: 300 SPEIRQSLRIPDTADDSEALGVIRQAKDNF 329
S +IR+SL IPDTAD++EALG+IR+AKDNF
Sbjct: 300 STDIRKSLSIPDTADEAEALGIIRRAKDNF 329
|
Length = 329 |
| >gnl|CDD|234201 TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|178088 PLN02469, PLN02469, hydroxyacylglutathione hydrolase | Back alignment and domain information |
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| >gnl|CDD|182327 PRK10241, PRK10241, hydroxyacylglutathione hydrolase; Provisional | Back alignment and domain information |
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| >gnl|CDD|214854 smart00849, Lactamase_B, Metallo-beta-lactamase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|223565 COG0491, GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only] | Back alignment and domain information |
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| >gnl|CDD|216099 pfam00753, Lactamase_B, Metallo-beta-lactamase superfamily | Back alignment and domain information |
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| >gnl|CDD|178547 PLN02962, PLN02962, hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|223503 COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|234811 PRK00685, PRK00685, metal-dependent hydrolase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 329 | |||
| PLN02398 | 329 | hydroxyacylglutathione hydrolase | 100.0 | |
| PLN02469 | 258 | hydroxyacylglutathione hydrolase | 100.0 | |
| TIGR03413 | 248 | GSH_gloB hydroxyacylglutathione hydrolase. Members | 100.0 | |
| PRK10241 | 251 | hydroxyacylglutathione hydrolase; Provisional | 100.0 | |
| KOG0813 | 265 | consensus Glyoxylase [General function prediction | 100.0 | |
| PLN02962 | 251 | hydroxyacylglutathione hydrolase | 100.0 | |
| KOG0814 | 237 | consensus Glyoxylase [General function prediction | 99.95 | |
| PRK11921 | 394 | metallo-beta-lactamase/flavodoxin domain-containin | 99.92 | |
| PRK05452 | 479 | anaerobic nitric oxide reductase flavorubredoxin; | 99.91 | |
| COG0491 | 252 | GloB Zn-dependent hydrolases, including glyoxylase | 99.88 | |
| smart00849 | 183 | Lactamase_B Metallo-beta-lactamase superfamily. Ap | 99.85 | |
| COG0426 | 388 | FpaA Uncharacterized flavoproteins [Energy product | 99.84 | |
| PF00753 | 194 | Lactamase_B: Metallo-beta-lactamase superfamily; I | 99.81 | |
| PF14597 | 199 | Lactamase_B_5: Metallo-beta-lactamase superfamily; | 99.77 | |
| PRK11539 | 755 | ComEC family competence protein; Provisional | 99.72 | |
| COG2333 | 293 | ComEC Predicted hydrolase (metallo-beta-lactamase | 99.72 | |
| TIGR00361 | 662 | ComEC_Rec2 DNA internalization-related competence | 99.69 | |
| TIGR00649 | 422 | MG423 conserved hypothetical protein. Contains an | 99.62 | |
| COG2015 | 655 | Alkyl sulfatase and related hydrolases [Secondary | 99.45 | |
| PRK00685 | 228 | metal-dependent hydrolase; Provisional | 99.32 | |
| TIGR03675 | 630 | arCOG00543 arCOG00543 universal archaeal KH-domain | 99.32 | |
| COG0595 | 555 | mRNA degradation ribonucleases J1/J2 (metallo-beta | 99.29 | |
| PRK11244 | 250 | phnP carbon-phosphorus lyase complex accessory pro | 99.25 | |
| COG1237 | 259 | Metal-dependent hydrolases of the beta-lactamase s | 99.22 | |
| TIGR03307 | 238 | PhnP phosphonate metabolism protein PhnP. This fam | 99.22 | |
| PRK04286 | 298 | hypothetical protein; Provisional | 99.21 | |
| PRK02113 | 252 | putative hydrolase; Provisional | 99.19 | |
| PRK02126 | 334 | ribonuclease Z; Provisional | 99.13 | |
| PRK05184 | 302 | pyrroloquinoline quinone biosynthesis protein PqqB | 99.1 | |
| TIGR02108 | 302 | PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B. | 99.08 | |
| TIGR02651 | 299 | RNase_Z ribonuclease Z. Processing of the 3-prime | 99.03 | |
| COG1782 | 637 | Predicted metal-dependent RNase, consists of a met | 99.02 | |
| COG1236 | 427 | YSH1 Predicted exonuclease of the beta-lactamase f | 99.02 | |
| TIGR02649 | 303 | true_RNase_BN ribonuclease BN. Members of this pro | 99.02 | |
| PF12706 | 194 | Lactamase_B_2: Beta-lactamase superfamily domain; | 99.0 | |
| KOG4736 | 302 | consensus Uncharacterized conserved protein [Funct | 98.9 | |
| PRK11709 | 355 | putative L-ascorbate 6-phosphate lactonase; Provis | 98.85 | |
| PF13483 | 163 | Lactamase_B_3: Beta-lactamase superfamily domain; | 98.79 | |
| KOG1136 | 501 | consensus Predicted cleavage and polyadenylation s | 98.63 | |
| PRK00055 | 270 | ribonuclease Z; Reviewed | 98.57 | |
| COG2248 | 304 | Predicted hydrolase (metallo-beta-lactamase superf | 98.39 | |
| KOG1137 | 668 | consensus mRNA cleavage and polyadenylation factor | 98.33 | |
| COG1235 | 269 | PhnP Metal-dependent hydrolases of the beta-lactam | 98.25 | |
| COG2220 | 258 | Predicted Zn-dependent hydrolases of the beta-lact | 98.19 | |
| KOG1135 | 764 | consensus mRNA cleavage and polyadenylation factor | 97.86 | |
| COG1234 | 292 | ElaC Metal-dependent hydrolases of the beta-lactam | 97.74 | |
| TIGR02650 | 277 | RNase_Z_T_toga ribonuclease Z, Thermotoga type. Me | 97.73 | |
| KOG1361 | 481 | consensus Predicted hydrolase involved in interstr | 96.93 | |
| PF02112 | 335 | PDEase_II: cAMP phosphodiesterases class-II; Inter | 96.2 | |
| KOG2121 | 746 | consensus Predicted metal-dependent hydrolase (bet | 94.07 | |
| PF14234 | 285 | DUF4336: Domain of unknown function (DUF4336) | 93.04 | |
| KOG3798 | 343 | consensus Predicted Zn-dependent hydrolase (beta-l | 86.24 |
| >PLN02398 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-68 Score=490.87 Aligned_cols=328 Identities=85% Similarity=1.326 Sum_probs=311.8
Q ss_pred CchhhhhhhhhhhhccccccC-CCcccCCCcccccccchhhhhHHHhhcCCCCCcccCcceeeeeceeeeecCCCcceEE
Q 020215 1 MQMISRASSAAMASFTCSRGQ-SGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASRSLRVAEFCSISNMSSSLQIE 79 (329)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~v~~g~~~~~~~~~~~i~ 79 (329)
||||||+|| ++++..|+++. +++|+||..|++++++++++++++++.+|.++.++++.++.+++.+..-..+..|++.
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 79 (329)
T PLN02398 1 MQMISKASS-AMSSFRCSRRIRGQLCVRPGVRQLCLRKSLLYGVMKLLSMPLKTLRGAGRTLKVAQFCSVSNVSSSLQIE 79 (329)
T ss_pred Ccchhhhhh-ccccCcchhhhcCcccccchhhhhhcccchhHHHHHHHhCchhhccccchhhhhhhhhcccCCCCCcEEE
Confidence 899999999 78888999997 9999999999999999999999999999999999999999999997777776789999
Q ss_pred EeceecceEEEEEEECCCCeEEEEcCCCcHHHHHHHHhcCCCccEEecCCCCcCccCChHHHHHhhCCeEEecCCcCCCC
Q 020215 80 LVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRI 159 (329)
Q Consensus 80 ~~~~~~~n~~yli~~~~~g~~vliD~g~~~~~~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~ 159 (329)
.+|++.+||+|+|.+++++.+++|||+....+++.+++.+.+|++|++||.|+||+||+.+|.+.++++||+++.+.+.+
T Consensus 80 ~ip~l~dNy~Yli~d~~t~~~~vVDP~~a~~vl~~l~~~g~~L~~ILlTH~H~DH~GG~~~L~~~~ga~V~g~~~~~~~i 159 (329)
T PLN02398 80 LVPCLKDNYAYLLHDEDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHYDHTGGNLELKARYGAKVIGSAVDKDRI 159 (329)
T ss_pred EEeeeCceEEEEEEECCCCEEEEEcCCCHHHHHHHHHhcCCCceEEEECCCCchhhCCHHHHHHhcCCEEEEehHHhhhc
Confidence 99999999999999887888999999999999999999999999999999999999999999999999999998877777
Q ss_pred CCccEEccCCCEEEECCeEEEEEecCCCCCCCEEEEeCCCcEEEECCccccCcCCCCCCCCHHHHHHHHHHHhCCCCCeE
Q 020215 160 PGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTN 239 (329)
Q Consensus 160 ~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~g~~~~~~~~~~~lftGD~l~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~ 239 (329)
+..+..+.+|+.+.+|+.+++++++||||+||++|++++.++||+||++|..++++++++++++|++||++|.+|++++.
T Consensus 160 ~~~d~~v~dGd~i~lgg~~l~vi~tPGHT~GhI~~~~~~~~vLFtGDtLf~~g~Gr~feg~~~~~~~SL~rL~~L~~~t~ 239 (329)
T PLN02398 160 PGIDIVLKDGDKWMFAGHEVLVMETPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTPEQMLSSLQKIISLPDDTN 239 (329)
T ss_pred cCCcEEeCCCCEEEECCeEEEEEeCCCcCCCCEEEEECCCCEEEECCCcCCCCcCCCCCCCHHHHHHHHHHHHcCCCCeE
Confidence 77888899999999999999999999999999999998888999999999999999999999999999999999999988
Q ss_pred EEeCCCccccChhhhcccCCChHHHHHHHHHHHHHHhCCCCCCCCcHHhHHhcCCccCCCchHHHHhcCCCCCCCHHHHH
Q 020215 240 VYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEAL 319 (329)
Q Consensus 240 v~pgHg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~e~~~np~l~~~~~~~~~~~~~~~~~~~~~~~ 319 (329)
||||||++.+|.+|+..++|+++.++.+.+++++++++|.+++|++|++|+++|||+|..++++++.++++...++.++|
T Consensus 240 VypGHgyt~~Nl~Fa~~vep~n~~l~~~~~~v~~~r~~~~~t~Pstl~~E~~~NPFlR~~~~~v~~~~~~~~~~~~~~~f 319 (329)
T PLN02398 240 IYCGHEYTLSNSKFALSIEPNNEVLQSYAAHVAHLRSKGLPTIPTTVKMEKACNPFLRTSSTDIRKSLSIPDTADEAEAL 319 (329)
T ss_pred EECCCCChhcchhhHhhhCCChHHHHHHHHHHHHHHHcCCCcCCccHHHHHhhCCeecCCCHHHHHHhcCccCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875557899999
Q ss_pred HHHHhhhcCC
Q 020215 320 GVIRQAKDNF 329 (329)
Q Consensus 320 ~~lr~~~~~~ 329 (329)
..||+|||+|
T Consensus 320 ~~lR~~Kd~f 329 (329)
T PLN02398 320 GIIRRAKDNF 329 (329)
T ss_pred HHHHHHhhCC
Confidence 9999999998
|
|
| >PLN02469 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >PRK10241 hydroxyacylglutathione hydrolase; Provisional | Back alignment and domain information |
|---|
| >KOG0813 consensus Glyoxylase [General function prediction only] | Back alignment and domain information |
|---|
| >PLN02962 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >KOG0814 consensus Glyoxylase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional | Back alignment and domain information |
|---|
| >COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] | Back alignment and domain information |
|---|
| >smart00849 Lactamase_B Metallo-beta-lactamase superfamily | Back alignment and domain information |
|---|
| >COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain [] | Back alignment and domain information |
|---|
| >PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B | Back alignment and domain information |
|---|
| >PRK11539 ComEC family competence protein; Provisional | Back alignment and domain information |
|---|
| >COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2 | Back alignment and domain information |
|---|
| >TIGR00649 MG423 conserved hypothetical protein | Back alignment and domain information |
|---|
| >COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >PRK00685 metal-dependent hydrolase; Provisional | Back alignment and domain information |
|---|
| >TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein | Back alignment and domain information |
|---|
| >COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional | Back alignment and domain information |
|---|
| >COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03307 PhnP phosphonate metabolism protein PhnP | Back alignment and domain information |
|---|
| >PRK04286 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK02113 putative hydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK02126 ribonuclease Z; Provisional | Back alignment and domain information |
|---|
| >PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional | Back alignment and domain information |
|---|
| >TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B | Back alignment and domain information |
|---|
| >TIGR02651 RNase_Z ribonuclease Z | Back alignment and domain information |
|---|
| >COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] | Back alignment and domain information |
|---|
| >COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >TIGR02649 true_RNase_BN ribonuclease BN | Back alignment and domain information |
|---|
| >PF12706 Lactamase_B_2: Beta-lactamase superfamily domain; PDB: 3BV6_F 1WW1_A 2E7Y_A 3RPC_D 3ZWF_A 3JXP_A 1XTO_A 2CBN_A 3G1P_B 3P2U_A | Back alignment and domain information |
|---|
| >KOG4736 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional | Back alignment and domain information |
|---|
| >PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A | Back alignment and domain information |
|---|
| >KOG1136 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK00055 ribonuclease Z; Reviewed | Back alignment and domain information |
|---|
| >COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1137 consensus mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] | Back alignment and domain information |
|---|
| >COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1135 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit) [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type | Back alignment and domain information |
|---|
| >KOG1361 consensus Predicted hydrolase involved in interstrand cross-link repair [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF02112 PDEase_II: cAMP phosphodiesterases class-II; InterPro: IPR000396 Cyclic-AMP phosphodiesterase (3 | Back alignment and domain information |
|---|
| >KOG2121 consensus Predicted metal-dependent hydrolase (beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >PF14234 DUF4336: Domain of unknown function (DUF4336) | Back alignment and domain information |
|---|
| >KOG3798 consensus Predicted Zn-dependent hydrolase (beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 329 | ||||
| 1xm8_A | 254 | X-Ray Structure Of Glyoxalase Ii From Arabidopsis T | 1e-118 | ||
| 2qed_A | 258 | Crystal Structure Of Salmonella Thyphimurium Lt2 Gl | 2e-39 | ||
| 1qh3_A | 260 | Human Glyoxalase Ii With Cacodylate And Acetate Ion | 2e-37 | ||
| 2p18_A | 311 | Crystal Structure Of The Leishmania Infantum Glyoxa | 2e-21 | ||
| 2zwr_A | 207 | Crystal Structure Of Ttha1623 From Thermus Thermoph | 2e-10 | ||
| 2gcu_A | 245 | X-Ray Structure Of Gene Product From Arabidopsis Th | 2e-08 | ||
| 4efz_A | 298 | Crystal Structure Of A Hypothetical Metallo-Beta-La | 4e-06 | ||
| 2xf4_A | 210 | Crystal Structure Of Salmonella Enterica Serovar Ty | 1e-05 | ||
| 3tp9_A | 474 | Crystal Structure Of Alicyclobacillus Acidocaldariu | 7e-05 | ||
| 4ad9_A | 289 | Crystal Structure Of Human Lactb2. Length = 289 | 4e-04 |
| >pdb|1XM8|A Chain A, X-Ray Structure Of Glyoxalase Ii From Arabidopsis Thaliana Gene At2g31350 Length = 254 | Back alignment and structure |
|
| >pdb|2QED|A Chain A, Crystal Structure Of Salmonella Thyphimurium Lt2 Glyoxalase Ii Length = 258 | Back alignment and structure |
| >pdb|1QH3|A Chain A, Human Glyoxalase Ii With Cacodylate And Acetate Ions Present In The Active Site Length = 260 | Back alignment and structure |
| >pdb|2P18|A Chain A, Crystal Structure Of The Leishmania Infantum Glyoxalase Ii Length = 311 | Back alignment and structure |
| >pdb|2ZWR|A Chain A, Crystal Structure Of Ttha1623 From Thermus Thermophilus Hb8 Length = 207 | Back alignment and structure |
| >pdb|2GCU|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At1g53580 Length = 245 | Back alignment and structure |
| >pdb|4EFZ|A Chain A, Crystal Structure Of A Hypothetical Metallo-Beta-Lactamase From Burkholderia Pseudomallei Length = 298 | Back alignment and structure |
| >pdb|2XF4|A Chain A, Crystal Structure Of Salmonella Enterica Serovar Typhimurium Ycbl Length = 210 | Back alignment and structure |
| >pdb|3TP9|A Chain A, Crystal Structure Of Alicyclobacillus Acidocaldarius Protein With Beta-Lactamase And Rhodanese Domains Length = 474 | Back alignment and structure |
| >pdb|4AD9|A Chain A, Crystal Structure Of Human Lactb2. Length = 289 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A Length = 254 | Back alignment and structure |
|---|
Score = 458 bits (1180), Expect = e-164
Identities = 204/254 (80%), Positives = 236/254 (92%)
Query: 76 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHT 135
+QIELVPCL+DNYAY+LHD DTGTVGVVDPSEA P+ID+L R RNLTYILNTHHH+DHT
Sbjct: 1 MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHT 60
Query: 136 GGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFY 195
GGNLELK RYGAKVIGS +DKDRIPGID+ L DGDKWMFAGHEVHV+DTPGHT+GHIS Y
Sbjct: 61 GGNLELKDRYGAKVIGSAMDKDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLY 120
Query: 196 FPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFAL 255
FPGS A+FTGDT+FSLSCGKLFEGTP QM +SLQKI SLPDDT++YCGHEYTLSNSKFAL
Sbjct: 121 FPGSRAIFTGDTMFSLSCGKLFEGTPKQMLASLQKITSLPDDTSIYCGHEYTLSNSKFAL 180
Query: 256 SIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADD 315
S+EPNNE LQSYAAH+A+LRSK +PTIPTT+KMEK+CNPFLR+S+ +IR++LRIP+ AD+
Sbjct: 181 SLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRIPEAADE 240
Query: 316 SEALGVIRQAKDNF 329
+EALG+IR+AKD+F
Sbjct: 241 AEALGIIRKAKDDF 254
|
| >2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 Length = 258 | Back alignment and structure |
|---|
| >1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* Length = 260 | Back alignment and structure |
|---|
| >2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* Length = 311 | Back alignment and structure |
|---|
| >2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A Length = 207 | Back alignment and structure |
|---|
| >2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Length = 210 | Back alignment and structure |
|---|
| >3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A Length = 294 | Back alignment and structure |
|---|
| >1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A Length = 228 | Back alignment and structure |
|---|
| >1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Length = 263 | Back alignment and structure |
|---|
| >2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} Length = 245 | Back alignment and structure |
|---|
| >4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} Length = 298 | Back alignment and structure |
|---|
| >2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 Length = 201 | Back alignment and structure |
|---|
| >3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Length = 466 | Back alignment and structure |
|---|
| >1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Length = 269 | Back alignment and structure |
|---|
| >3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474 | Back alignment and structure |
|---|
| >4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
| >3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} Length = 261 | Back alignment and structure |
|---|
| >2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* Length = 303 | Back alignment and structure |
|---|
| >1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* Length = 232 | Back alignment and structure |
|---|
| >4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B Length = 303 | Back alignment and structure |
|---|
| >3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} Length = 219 | Back alignment and structure |
|---|
| >2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A Length = 265 | Back alignment and structure |
|---|
| >1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 Length = 223 | Back alignment and structure |
|---|
| >1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... Length = 227 | Back alignment and structure |
|---|
| >2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} Length = 317 | Back alignment and structure |
|---|
| >4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Length = 270 | Back alignment and structure |
|---|
| >3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A Length = 227 | Back alignment and structure |
|---|
| >3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A Length = 233 | Back alignment and structure |
|---|
| >2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} Length = 246 | Back alignment and structure |
|---|
| >1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Length = 221 | Back alignment and structure |
|---|
| >3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A Length = 254 | Back alignment and structure |
|---|
| >3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A Length = 274 | Back alignment and structure |
|---|
| >3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} Length = 280 | Back alignment and structure |
|---|
| >2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} Length = 276 | Back alignment and structure |
|---|
| >1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 Length = 331 | Back alignment and structure |
|---|
| >2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* Length = 404 | Back alignment and structure |
|---|
| >2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Length = 414 | Back alignment and structure |
|---|
| >1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Length = 402 | Back alignment and structure |
|---|
| >3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503} Length = 235 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 329 | |||
| 1xm8_A | 254 | Glyoxalase II; structural genomics, protein struct | 100.0 | |
| 1qh5_A | 260 | Glyoxalase II, protein (hydroxyacylglutathione hyd | 100.0 | |
| 2qed_A | 258 | Hydroxyacylglutathione hydrolase; metallo-B- super | 100.0 | |
| 2p18_A | 311 | Glyoxalase II; metalloprotein, beta sandwich, alph | 100.0 | |
| 4efz_A | 298 | Metallo-beta-lactamase family protein; structural | 100.0 | |
| 2gcu_A | 245 | Putative hydroxyacylglutathione hydrolase 3; ethyl | 100.0 | |
| 3r2u_A | 466 | Metallo-beta-lactamase family protein; structural | 100.0 | |
| 2xf4_A | 210 | Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A | 100.0 | |
| 3tp9_A | 474 | Beta-lactamase and rhodanese domain protein; struc | 99.98 | |
| 2zwr_A | 207 | Metallo-beta-lactamase superfamily protein; hydrol | 99.97 | |
| 2zo4_A | 317 | Metallo-beta-lactamase family protein; hydrolase; | 99.97 | |
| 4ad9_A | 289 | Lactb2, beta-lactamase-like protein 2; hydrolase, | 99.96 | |
| 2fhx_A | 246 | SPM-1; metallo-beta-lactamase, dinuclear zinc, ant | 99.96 | |
| 4eyb_A | 270 | Beta-lactamase NDM-1; metallo beta lactamase, anti | 99.96 | |
| 1m2x_A | 223 | Class B carbapenemase BLAB-1; alpha-beta/BETA-alph | 99.96 | |
| 3hnn_A | 262 | Putative diflavin flavoprotein A 5; PSI-2, protein | 99.96 | |
| 4hl2_A | 243 | Beta-lactamase NDM-1; structural genomics, PSI-bio | 99.96 | |
| 1a7t_A | 232 | Metallo-beta-lactamase; hydrolase (beta-lactamase) | 99.96 | |
| 1jjt_A | 228 | IMP-1 metallo beta-lactamase; metallo-beta-lactama | 99.96 | |
| 3l6n_A | 219 | Metallo-beta-lactamase; zinc, hydolase, antibiotic | 99.96 | |
| 2vw8_A | 303 | PA1000, PQSE; quinolone signal response protein, s | 99.96 | |
| 3m8t_A | 294 | 'BLR6230 protein; subclass B3 beta-lactamase, zinc | 99.96 | |
| 3iog_A | 227 | Beta-lactamase; hydrolase, antibiotic resistance, | 99.96 | |
| 1k07_A | 263 | FEZ-1 beta-lactamase; monomer with alpha-beta/BETA | 99.95 | |
| 1mqo_A | 227 | Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd | 99.95 | |
| 3q6v_A | 233 | Beta-lactamase; metalloenzyme, alpha-beta, hydrola | 99.95 | |
| 2y8b_A | 265 | Metallo-B-lactamase; hydrolase, cephalosporins, an | 99.95 | |
| 4ax1_B | 303 | Metallo-beta-lactamase AIM-1; hydrolase, antibioti | 99.95 | |
| 2cfu_A | 658 | SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1 | 99.94 | |
| 1sml_A | 269 | Protein (penicillinase); metallo-beta-lactamase, a | 99.94 | |
| 2p97_A | 201 | Hypothetical protein; putative metal-dependent hyd | 99.94 | |
| 4dik_A | 410 | Flavoprotein; TM0755, electron transport, DI-iron | 99.93 | |
| 2ohh_A | 404 | Type A flavoprotein FPRA; beta-lactamase like doma | 99.93 | |
| 2yhe_A | 668 | SEC-alkyl sulfatase; hydrolase, inversion, metallo | 99.88 | |
| 1ycg_A | 398 | Nitric oxide reductase; DIIRON site, oxidoreductas | 99.93 | |
| 2q9u_A | 414 | A-type flavoprotein; flavodoxin like, beta lactama | 99.92 | |
| 1e5d_A | 402 | Rubredoxin\:oxygen oxidoreductase; oxygenreductase | 99.92 | |
| 3dha_A | 254 | N-acyl homoserine lactone hydrolase; zinc bimetall | 99.9 | |
| 3adr_A | 261 | Putative uncharacterized protein ST1585; quorum se | 99.9 | |
| 1ztc_A | 221 | Hypothetical protein TM0894; structural genomics, | 99.88 | |
| 3esh_A | 280 | Protein similar to metal-dependent hydrolase; stru | 99.87 | |
| 3aj3_A | 274 | MLR6805 protein, 4-pyridoxolactonase; Zn-protein, | 99.87 | |
| 2r2d_A | 276 | AGR_PTI_140P, Zn-dependent hydrolases; lactonase, | 99.85 | |
| 1p9e_A | 331 | Methyl parathion hydrolase; Zn containing; 2.40A { | 99.84 | |
| 2bib_A | 547 | CBPE, teichoic acid phosphorylcholine esterase/ ch | 99.67 | |
| 1zkp_A | 268 | Hypothetical protein BA1088; zinc binding protein, | 99.67 | |
| 3zq4_A | 555 | Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat | 99.64 | |
| 3g1p_A | 258 | Protein PHNP; C-P lyase, phosphodiesterase, phosph | 99.62 | |
| 3bk2_A | 562 | RNAse J, metal dependent hydrolase; endoribonuclea | 99.62 | |
| 3iek_A | 431 | Ribonuclease TTHA0252; metallo beta lactamase fold | 99.61 | |
| 2ycb_A | 636 | Beta-CAsp RNAse, cleavage and polyadenylation spec | 99.57 | |
| 3af5_A | 651 | Putative uncharacterized protein PH1404; archaeal | 99.53 | |
| 2xr1_A | 640 | Cleavage and polyadenylation specificity factor 1 | 99.53 | |
| 2i7t_A | 459 | Cleavage and polyadenylation specificity factor 73 | 99.52 | |
| 3md7_A | 293 | Beta-lactamase-like; ssgcid, hydrolase, structural | 99.52 | |
| 2e7y_A | 280 | TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, | 99.51 | |
| 3kl7_A | 235 | Putative metal-dependent hydrolase; structural gen | 99.5 | |
| 2i7x_A | 717 | Protein CFT2; polyadenylation, metallo-B-lactamase | 99.5 | |
| 2az4_A | 429 | Hypothetical protein EF2904; structural genomics, | 99.49 | |
| 1y44_A | 320 | Ribonuclease Z; zinc-dependent metal hydrolase, hy | 99.46 | |
| 2cbn_A | 306 | Ribonuclease Z; phosphodiesterase beta lactamase t | 99.43 | |
| 2wyl_A | 360 | L-ascorbate-6-phosphate lactonase ULAG; hydrolase; | 99.24 | |
| 3jxp_A | 321 | Coenzyme PQQ synthesis protein B; alpha-beta prote | 99.24 | |
| 3zwf_A | 368 | Zinc phosphodiesterase ELAC protein 1; beta-lactam | 99.23 | |
| 2p4z_A | 284 | Metal-dependent hydrolases of the beta-lactamase s | 99.23 | |
| 4b87_A | 367 | DNA cross-LINK repair 1A protein; dclre1A, DCLRE, | 99.22 | |
| 3rpc_A | 264 | Possible metal-dependent hydrolase; structural gen | 99.2 | |
| 3bv6_A | 379 | Metal-dependent hydrolase; metallo protein, beta-l | 99.17 | |
| 1vjn_A | 220 | Zn-dependent hydrolase of metallo-beta-lactamase s | 99.09 | |
| 3zdk_A | 336 | 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A | 99.04 | |
| 3h3e_A | 267 | Uncharacterized protein TM1679; structural genomic | 99.02 |
| >1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-51 Score=371.14 Aligned_cols=254 Identities=80% Similarity=1.332 Sum_probs=237.2
Q ss_pred ceEEEeceecceEEEEEEECCCCeEEEEcCCCcHHHHHHHHhcCCCccEEecCCCCcCccCChHHHHHhhCCeEEecCCc
Q 020215 76 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVD 155 (329)
Q Consensus 76 ~~i~~~~~~~~n~~yli~~~~~g~~vliD~g~~~~~~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~ 155 (329)
|++..+++++.||+|+|.+++++.+++||||....+++.|++.+.+|++|++||.|+||+||+..|.+.++++||+++.+
T Consensus 1 m~i~~~~~~~~n~~yli~~~~~~~~~lID~g~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~v~~~~~~ 80 (254)
T 1xm8_A 1 MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMD 80 (254)
T ss_dssp CEEEEEEETTTEEEEEEECTTTCCEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHHCCEEEEEGGG
T ss_pred CEEEEecccCCeEEEEEEECCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEECCCCCcccccHHHHHHHcCCeEEEchhh
Confidence 56778888888999999886567899999998888889999988899999999999999999999999889999999988
Q ss_pred CCCCCCccEEccCCCEEEECCeEEEEEecCCCCCCCEEEEeCCCcEEEECCccccCcCCCCCCCCHHHHHHHHHHHhCCC
Q 020215 156 KDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLP 235 (329)
Q Consensus 156 ~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~g~~~~~~~~~~~lftGD~l~~~~~~~~~~~~~~~~~~sl~~l~~l~ 235 (329)
.+.++.....+.+|+.+.+|+.+++++++||||+||++|++++.++||+||+++..++++++.++.++|.+||+++.+|+
T Consensus 81 ~~~~~~~~~~~~~g~~~~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~l~~~~~g~~~~~~~~~~~~Sl~~l~~l~ 160 (254)
T 1xm8_A 81 KDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSCGKLFEGTPKQMLASLQKITSLP 160 (254)
T ss_dssp GGGSTTEEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEGGGTEEEEETTEETTEECCCSSSCHHHHHHHHHHHHTSC
T ss_pred hhcCCCCceeeCCCCEEEECCEEEEEEECCCCCCCcEEEEECCCCEEEEcCccccCCCCCCCCCCHHHHHHHHHHHHccC
Confidence 77777777789999999999999999999999999999999888999999999998888888999999999999999999
Q ss_pred CCeEEEeCCCccccChhhhcccCCChHHHHHHHHHHHHHHhCCCCCCCCcHHhHHhcCCccCCCchHHHHhcCCCCCCCH
Q 020215 236 DDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADD 315 (329)
Q Consensus 236 ~~~~v~pgHg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~e~~~np~l~~~~~~~~~~~~~~~~~~~ 315 (329)
+++.|+||||++..+.+|+.++++.+++++.+.+++++++++|.++.++++++|+++|||++..+++++++++.....++
T Consensus 161 ~~~~v~pgHg~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~g~~~~~tti~~e~~~Npfl~~~~~~~~~~~~~~~~~~~ 240 (254)
T 1xm8_A 161 DDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRIPEAADE 240 (254)
T ss_dssp TTCEEEESBCCHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTCCCCCEEHHHHHHHCGGGCTTCHHHHHHHTCCTTCCH
T ss_pred CCcEEEeCCcchhcchhhhhhcCCCcHHHHHHHHHHHHHHhCCCCcCCccHHHHhhcCCeecCCCHHHHHHhcccCCCCH
Confidence 88789999999999999999999999999999999999999999999999999999999999999999999997766789
Q ss_pred HHHHHHHHhhhcCC
Q 020215 316 SEALGVIRQAKDNF 329 (329)
Q Consensus 316 ~~~~~~lr~~~~~~ 329 (329)
.++|..||+|||+|
T Consensus 241 ~~~~~~lr~~k~~f 254 (254)
T 1xm8_A 241 AEALGIIRKAKDDF 254 (254)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhccC
Confidence 99999999999998
|
| >1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* | Back alignment and structure |
|---|
| >2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 | Back alignment and structure |
|---|
| >2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* | Back alignment and structure |
|---|
| >4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
| >2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} | Back alignment and structure |
|---|
| >3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A | Back alignment and structure |
|---|
| >2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
| >4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A | Back alignment and structure |
|---|
| >1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 | Back alignment and structure |
|---|
| >4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A | Back alignment and structure |
|---|
| >1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* | Back alignment and structure |
|---|
| >1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A | Back alignment and structure |
|---|
| >3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0 | Back alignment and structure |
|---|
| >2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* | Back alignment and structure |
|---|
| >3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A | Back alignment and structure |
|---|
| >3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A | Back alignment and structure |
|---|
| >1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A | Back alignment and structure |
|---|
| >1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... | Back alignment and structure |
|---|
| >3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A | Back alignment and structure |
|---|
| >2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A | Back alignment and structure |
|---|
| >4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B | Back alignment and structure |
|---|
| >2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* | Back alignment and structure |
|---|
| >1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A | Back alignment and structure |
|---|
| >2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 | Back alignment and structure |
|---|
| >4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A* | Back alignment and structure |
|---|
| >2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* | Back alignment and structure |
|---|
| >2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP} | Back alignment and structure |
|---|
| >1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* | Back alignment and structure |
|---|
| >2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} | Back alignment and structure |
|---|
| >1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 | Back alignment and structure |
|---|
| >3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A | Back alignment and structure |
|---|
| >3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 | Back alignment and structure |
|---|
| >3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A | Back alignment and structure |
|---|
| >2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
| >1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 | Back alignment and structure |
|---|
| >2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A* | Back alignment and structure |
|---|
| >1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 | Back alignment and structure |
|---|
| >3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A | Back alignment and structure |
|---|
| >3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A* | Back alignment and structure |
|---|
| >3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A* | Back alignment and structure |
|---|
| >2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid} | Back alignment and structure |
|---|
| >3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* | Back alignment and structure |
|---|
| >2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A | Back alignment and structure |
|---|
| >3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A* | Back alignment and structure |
|---|
| >2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A | Back alignment and structure |
|---|
| >3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
| >2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10 | Back alignment and structure |
|---|
| >2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10 | Back alignment and structure |
|---|
| >1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* | Back alignment and structure |
|---|
| >2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 | Back alignment and structure |
|---|
| >2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A* | Back alignment and structure |
|---|
| >3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A | Back alignment and structure |
|---|
| >3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
| >4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens} | Back alignment and structure |
|---|
| >3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula} | Back alignment and structure |
|---|
| >3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor} | Back alignment and structure |
|---|
| >1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4 | Back alignment and structure |
|---|
| >3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens} | Back alignment and structure |
|---|
| >3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 329 | ||||
| d1xm8a_ | 254 | d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathio | 9e-95 | |
| d2qeda1 | 251 | d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglut | 5e-69 | |
| d1qh5a_ | 260 | d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathio | 8e-61 | |
| d2aioa1 | 266 | d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xa | 5e-29 | |
| d2gmna1 | 264 | d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Br | 4e-26 | |
| d1k07a_ | 262 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoriba | 6e-24 | |
| d2q0ia1 | 298 | d.157.1.14 (A:1-298) Quinolone signal response pro | 7e-24 | |
| d1jjta_ | 220 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomo | 7e-23 | |
| d2p97a1 | 200 | d.157.1.12 (A:1-200) Hypothetical protein Ava3068 | 8e-23 | |
| d1ko3a_ | 230 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomo | 1e-18 | |
| d1mqoa_ | 221 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus | 4e-18 | |
| d1x8ha_ | 228 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromona | 5e-15 | |
| d1e5da2 | 249 | d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreducta | 2e-14 | |
| d1ycga2 | 249 | d.157.1.3 (A:2-250) Nitric oxide reductase N-termi | 2e-14 | |
| d1znba_ | 230 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroi | 2e-13 | |
| d1vmea2 | 250 | d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, | 6e-13 | |
| d1m2xa_ | 219 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseob | 2e-12 | |
| d1ztca1 | 207 | d.157.1.11 (A:1-207) Hypothetical protein TM0894 { | 1e-08 | |
| d2cfua2 | 505 | d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudo | 5e-06 | |
| d2az4a1 | 183 | d.157.1.10 (A:56-238) Hypothetical protein EF2904 | 4e-05 | |
| d2dkfa1 | 431 | d.157.1.10 (A:1-431) Putative RNA-degradation prot | 5e-04 |
| >d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-hydrolase/oxidoreductase superfamily: Metallo-hydrolase/oxidoreductase family: Glyoxalase II (hydroxyacylglutathione hydrolase) domain: Glyoxalase II (hydroxyacylglutathione hydrolase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 279 bits (715), Expect = 9e-95
Identities = 204/254 (80%), Positives = 236/254 (92%)
Query: 76 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHT 135
+QIELVPCL+DNYAY+LHD DTGTVGVVDPSEA P+ID+L R RNLTYILNTHHH+DHT
Sbjct: 1 MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHT 60
Query: 136 GGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFY 195
GGNLELK RYGAKVIGS +DKDRIPGID+ L DGDKWMFAGHEVHV+DTPGHT+GHIS Y
Sbjct: 61 GGNLELKDRYGAKVIGSAMDKDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLY 120
Query: 196 FPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFAL 255
FPGS A+FTGDT+FSLSCGKLFEGTP QM +SLQKI SLPDDT++YCGHEYTLSNSKFAL
Sbjct: 121 FPGSRAIFTGDTMFSLSCGKLFEGTPKQMLASLQKITSLPDDTSIYCGHEYTLSNSKFAL 180
Query: 256 SIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADD 315
S+EPNNE LQSYAAH+A+LRSK +PTIPTT+KMEK+CNPFLR+S+ +IR++LRIP+ AD+
Sbjct: 181 SLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRIPEAADE 240
Query: 316 SEALGVIRQAKDNF 329
+EALG+IR+AKD+F
Sbjct: 241 AEALGIIRKAKDDF 254
|
| >d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} Length = 251 | Back information, alignment and structure |
|---|
| >d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} Length = 260 | Back information, alignment and structure |
|---|
| >d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} Length = 266 | Back information, alignment and structure |
|---|
| >d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Length = 264 | Back information, alignment and structure |
|---|
| >d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} Length = 262 | Back information, alignment and structure |
|---|
| >d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} Length = 298 | Back information, alignment and structure |
|---|
| >d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} Length = 220 | Back information, alignment and structure |
|---|
| >d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} Length = 200 | Back information, alignment and structure |
|---|
| >d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} Length = 230 | Back information, alignment and structure |
|---|
| >d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Length = 221 | Back information, alignment and structure |
|---|
| >d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} Length = 228 | Back information, alignment and structure |
|---|
| >d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Length = 249 | Back information, alignment and structure |
|---|
| >d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} Length = 249 | Back information, alignment and structure |
|---|
| >d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} Length = 230 | Back information, alignment and structure |
|---|
| >d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 250 | Back information, alignment and structure |
|---|
| >d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} Length = 219 | Back information, alignment and structure |
|---|
| >d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} Length = 207 | Back information, alignment and structure |
|---|
| >d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Length = 505 | Back information, alignment and structure |
|---|
| >d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} Length = 183 | Back information, alignment and structure |
|---|
| >d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Length = 431 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 329 | |||
| d1xm8a_ | 254 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 100.0 | |
| d2qeda1 | 251 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 100.0 | |
| d1qh5a_ | 260 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 100.0 | |
| d2q0ia1 | 298 | Quinolone signal response protein PqsE {Pseudomona | 99.96 | |
| d2gmna1 | 264 | Zn metallo-beta-lactamase {Bradyrhizobium japonicu | 99.95 | |
| d1k07a_ | 262 | Zn metallo-beta-lactamase {Fluoribacter gormanii, | 99.95 | |
| d1x8ha_ | 228 | Zn metallo-beta-lactamase {Aeromonas hydrophila, C | 99.95 | |
| d2cfua2 | 505 | Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI | 99.95 | |
| d1jjta_ | 220 | Zn metallo-beta-lactamase {Pseudomonas aeruginosa, | 99.95 | |
| d1ycga2 | 249 | Nitric oxide reductase N-terminal domain {Moorella | 99.95 | |
| d1mqoa_ | 221 | Zn metallo-beta-lactamase {Bacillus cereus [TaxId: | 99.95 | |
| d1e5da2 | 249 | Rubredoxin oxygen:oxidoreductase (ROO), N-terminal | 99.95 | |
| d2aioa1 | 266 | Zn metallo-beta-lactamase {Xanthomonas maltophilia | 99.94 | |
| d1m2xa_ | 219 | Zn metallo-beta-lactamase {Chryseobacterium mening | 99.94 | |
| d1ko3a_ | 230 | Zn metallo-beta-lactamase {Pseudomonas aeruginosa, | 99.94 | |
| d1znba_ | 230 | Zn metallo-beta-lactamase {Bacteroides fragilis [T | 99.93 | |
| d2p97a1 | 200 | Hypothetical protein Ava3068 {Anabaena variabilis | 99.92 | |
| d1vmea2 | 250 | ROO-like flavoprotein TM0755, N-terminal domain {T | 99.89 | |
| d1ztca1 | 207 | Hypothetical protein TM0894 {Thermotoga maritima [ | 99.83 | |
| d1p9ea_ | 294 | Methyl parathion hydrolase {Pseudomonas sp. WBC-3 | 99.8 | |
| d1wraa1 | 305 | Teichoic acid phosphorylcholine esterase Pce (LytD | 99.52 | |
| d2dkfa1 | 431 | Putative RNA-degradation protein TTHA0252 {Thermus | 99.52 | |
| d2az4a1 | 183 | Hypothetical protein EF2904 {Enterococcus faecalis | 99.39 | |
| d2i7xa1 | 514 | Cleavage factor two protein 2, CFT2 {Baker's yeast | 99.39 | |
| d1zkpa1 | 244 | Hypothetical protein BA1088 (BAS1016) {Bacillus an | 99.38 | |
| d2i7ta1 | 451 | Cleavage and polyadenylation specificity factor su | 99.34 | |
| d1y44a1 | 307 | Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId | 98.89 | |
| d2cbna1 | 305 | Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: | 98.85 | |
| d1vjna_ | 209 | Hypothetical protein TM0207 {Thermotoga maritima [ | 98.74 | |
| d1xtoa_ | 304 | Coenzyme PQQ synthesis protein B, PqqB {Pseudomona | 98.41 | |
| d2e7ya1 | 280 | Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax | 98.14 |
| >d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-hydrolase/oxidoreductase superfamily: Metallo-hydrolase/oxidoreductase family: Glyoxalase II (hydroxyacylglutathione hydrolase) domain: Glyoxalase II (hydroxyacylglutathione hydrolase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.1e-56 Score=400.17 Aligned_cols=254 Identities=80% Similarity=1.332 Sum_probs=245.9
Q ss_pred ceEEEeceecceEEEEEEECCCCeEEEEcCCCcHHHHHHHHhcCCCccEEecCCCCcCccCChHHHHHhhCCeEEecCCc
Q 020215 76 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVD 155 (329)
Q Consensus 76 ~~i~~~~~~~~n~~yli~~~~~g~~vliD~g~~~~~~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~ 155 (329)
|+|+.+|+++.|++|||.+++++.+++||||....+++.+++.+.++.+|++||.|+||++|+..+.+.++++++.+..+
T Consensus 1 M~i~~ip~~~dNy~Yli~d~~t~~avvIDPg~~~~i~~~l~~~~~~l~~Il~TH~H~DH~~g~~~l~~~~~~~v~~~~~~ 80 (254)
T d1xm8a_ 1 MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMD 80 (254)
T ss_dssp CEEEEEEETTTEEEEEEECTTTCCEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHHCCEEEEEGGG
T ss_pred CEEEEEeeeccEEEEEEEECCCCEEEEECCCCcHHHHHHHHHCCCceeEEecccCcccccCchHHHHhhcCCcEEecccc
Confidence 68899999999999999998888999999999989999999999999999999999999999999999999999999988
Q ss_pred CCCCCCccEEccCCCEEEECCeEEEEEecCCCCCCCEEEEeCCCcEEEECCccccCcCCCCCCCCHHHHHHHHHHHhCCC
Q 020215 156 KDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLP 235 (329)
Q Consensus 156 ~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~g~~~~~~~~~~~lftGD~l~~~~~~~~~~~~~~~~~~sl~~l~~l~ 235 (329)
....+..+..+++|+.+.+|+.++++++|||||+||+||++++.++|||||++|..++|+.++++++++++||++|.+|+
T Consensus 81 ~~~~~~~~~~l~dgd~i~lg~~~i~vl~TPGHT~ghi~~~~~~~~~lftGDtLf~~g~Gr~~~g~~~~~~~sl~kl~~Lp 160 (254)
T d1xm8a_ 81 KDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSCGKLFEGTPKQMLASLQKITSLP 160 (254)
T ss_dssp GGGSTTEEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEGGGTEEEEETTEETTEECCCSSSCHHHHHHHHHHHHTSC
T ss_pred cccCCCCCEEecCCCeeeecCcEEEEeeccCCCCCceEEEEcccceEEeCCEEEeecCCccccccHHHHHHHHHHHHhCC
Confidence 88888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeCCCccccChhhhcccCCChHHHHHHHHHHHHHHhCCCCCCCCcHHhHHhcCCccCCCchHHHHhcCCCCCCCH
Q 020215 236 DDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADD 315 (329)
Q Consensus 236 ~~~~v~pgHg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~l~~e~~~np~l~~~~~~~~~~~~~~~~~~~ 315 (329)
++++|||||+++..+..|+..+++.++.++.+.++++++++++.++.|+++++|+++|||+|..++++++.++++...++
T Consensus 161 d~t~v~~gH~y~~~n~~f~~~~~~~n~~l~~~~~~~~~~~~~~~~tvPstl~~E~~~Npflr~~~~~i~~~l~~~~~~~~ 240 (254)
T d1xm8a_ 161 DDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRIPEAADE 240 (254)
T ss_dssp TTCEEEESBCCHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTCCCCCEEHHHHHHHCGGGCTTCHHHHHHHTCCTTCCH
T ss_pred cccEEeccCCccchhhhhhhhhCCcchhhhhHHHHHHHHHhcCCCcccccHHHHHHhCccccCCCHHHHHHhCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988899
Q ss_pred HHHHHHHHhhhcCC
Q 020215 316 SEALGVIRQAKDNF 329 (329)
Q Consensus 316 ~~~~~~lr~~~~~~ 329 (329)
.++|..||++||+|
T Consensus 241 ~~~f~~LR~~kd~f 254 (254)
T d1xm8a_ 241 AEALGIIRKAKDDF 254 (254)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhcCC
Confidence 99999999999998
|
| >d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
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| >d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} | Back information, alignment and structure |
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| >d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} | Back information, alignment and structure |
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| >d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} | Back information, alignment and structure |
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| >d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} | Back information, alignment and structure |
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| >d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
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| >d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
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| >d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} | Back information, alignment and structure |
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| >d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} | Back information, alignment and structure |
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| >d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} | Back information, alignment and structure |
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| >d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} | Back information, alignment and structure |
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| >d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
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| >d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} | Back information, alignment and structure |
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| >d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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| >d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
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| >d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
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| >d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
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| >d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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