Citrus Sinensis ID: 020233

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
MACVKALAESPGLTSIPSTYNFTQNQHDHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVRV
ccccHHHHHcccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEcccccccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccEEEEEEccccccccccccccccccccccEEEEEcccccEEEEEccEEEEEEEEEcccccccccEEEEcccccEEEEEEEEccccccEEEccHHHHcccccccccccccHHHHHHHHHHcccccccccccccc
cccHHHHHHccccccccHHcEcccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHEcEHHHcEccEEEEEEccccccccHHHHEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccHHHccccccccccccccHHHHHHHHHHcccccccHHHHccc
MACVKAlaespgltsipstynftqnqhdheavseidpedsipvidfslltssspdqRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFagkhvldpircgtsfnaSVEKVFFWRDFLkvfvhpefhspnkpvgfseISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVanlyppcpqpelamgmpphsdhgLLTLLTQngicglqllhngkwvnvnilsngkykSVVHRAVVNNKMTRVSLAIangpsldtvvePSKELIERqseapayigiKYKDFLELqqsnqldnksvldrvrv
MACVkalaespgltsipstYNFTQNQHDHEAVSEIDPEDSIPVIDFSlltssspdqRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPefhspnkpvgfsEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNILSNGKYKSVVHRAVVNNKMTRVSLAiangpsldtvVEPSKELIERQSEAPAYIGIKYKDFLelqqsnqldnksvldrvrv
MACVKALAESPGLTSIPSTYNFTQNQHDHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVRV
******************************************VIDFS************VIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAM*****SDHGLLTLLTQNGICGLQLLHNGKWVNVNILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVV************APAYIGIKYKDFLEL*****************
MACVKALAESPGLTSIPSTYNF****************DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKRE**********RCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVRV
*********SPGLTSIPSTYNFTQNQHDHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVRV
*ACVKALAESPGLTSIPSTYNFTQNQHDHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLD**RV
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MACVKALAESPGLTSIPSTYNFTQNQHDHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVRV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query329 2.2.26 [Sep-21-2011]
D4N501364 Probable 2-oxoglutarate/F N/A no 0.954 0.862 0.342 7e-44
Q96323356 Leucoanthocyanidin dioxyg no no 0.887 0.820 0.333 2e-41
D4N500364 Thebaine 6-O-demethylase N/A no 0.957 0.865 0.334 4e-40
Q39224358 Protein SRG1 OS=Arabidops no no 0.975 0.896 0.303 4e-39
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.933 0.850 0.348 6e-39
O04847401 Deacetoxyvindoline 4-hydr N/A no 0.966 0.793 0.296 8e-38
O04274362 Leucoanthocyanidin dioxyg N/A no 0.844 0.767 0.330 2e-37
P51091357 Leucoanthocyanidin dioxyg N/A no 0.844 0.778 0.318 2e-37
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.957 0.872 0.326 2e-37
P24397344 Hyoscyamine 6-dioxygenase N/A no 0.823 0.787 0.310 1e-36
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function desciption
 Score =  177 bits (450), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/342 (34%), Positives = 179/342 (52%), Gaps = 28/342 (8%)

Query: 13  LTSIPSTYNFT-QNQHDHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDW 71
           L  IPS Y  T +N       S ID  +++PVID   L SS P      +  L  AC++W
Sbjct: 26  LAEIPSRYICTVENLQLPVGASVIDDHETVPVIDIENLISSEPVTEKLELDRLHSACKEW 85

Query: 72  GFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFF 131
           GFF V+NH V   L++      Q FFNL+  EK ++ G+   D    G +F AS ++   
Sbjct: 86  GFFQVVNHGVDTSLVDNVKSDIQGFFNLSMNEKIKY-GQKDGDVEGFGQAFVASEDQTLD 144

Query: 132 WRDFLKVFVHPEFHSPNKPVGFSEISL-------EYCKRIRQVARELLKGISESLGLEFC 184
           W D   +   P  H   KP  FS++ L        Y   +++++  L + + ++L ++  
Sbjct: 145 WADIFMILTLP-LHL-RKPHLFSKLPLPLRETIESYSSEMKKLSMVLFEKMEKALQVQAV 202

Query: 185 YIERAMNLDSGL-QILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQ-NGICGLQLLHNG 242
            I+    +   + Q++  N YPPCPQPELA+G+ PHSD G LT+L Q N + GLQ+ + G
Sbjct: 203 EIKEISEVFKDMTQVMRMNYYPPCPQPELAIGLTPHSDFGGLTILLQLNEVEGLQIKNEG 262

Query: 243 KWVNVN---------------ILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEP 287
           +W++V                I++NG Y+SV HRAVVN+   R+S+A  + P+L++ + P
Sbjct: 263 RWISVKPLPNAFVVNVGDVLEIMTNGMYRSVDHRAVVNSTKERLSIATFHDPNLESEIGP 322

Query: 288 SKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVRV 329
              LI   + A    G  Y + +E   S +LD KS LD +R+
Sbjct: 323 ISSLITPNTPALFRSGSTYGELVEEFHSRKLDGKSFLDSMRM 364
Non-heme dioxygenase active on an unknown substrate. No activity with (S)-reticuline, salutaridine, papaverine, (S)-corytuberine, oripavine, (S)-scoulerine, pavine, noscapine, codeine or thebaine.
Papaver somniferum (taxid: 3469)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q96323|LDOX_ARATH Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description
>sp|O04847|DV4H_CATRO Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2 Back     alignment and function description
>sp|O04274|LDOX_PERFR Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|P24397|HY6H_HYONI Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
255563200364 Leucoanthocyanidin dioxygenase, putative 0.987 0.892 0.650 1e-132
224141201366 predicted protein [Populus trichocarpa] 0.990 0.890 0.650 1e-131
255563204 453 Flavonol synthase/flavanone 3-hydroxylas 0.987 0.717 0.653 1e-130
296087451 559 unnamed protein product [Vitis vinifera] 0.975 0.574 0.641 1e-127
225465757353 PREDICTED: probable 2-oxoglutarate/Fe(II 0.978 0.912 0.639 1e-126
359475733352 PREDICTED: LOW QUALITY PROTEIN: probable 0.975 0.911 0.636 1e-124
356524814363 PREDICTED: probable 2-oxoglutarate/Fe(II 0.990 0.898 0.608 1e-121
225465774352 PREDICTED: probable 2-oxoglutarate/Fe(II 0.978 0.914 0.636 1e-116
224141195306 predicted protein [Populus trichocarpa] 0.878 0.944 0.656 1e-116
224096103336 predicted protein [Populus trichocarpa] 0.908 0.889 0.630 1e-114
>gi|255563200|ref|XP_002522603.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223538079|gb|EEF39690.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 223/343 (65%), Positives = 272/343 (79%), Gaps = 18/343 (5%)

Query: 1   MACVKALAESPGLTSIPSTYNFTQNQHDHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSKV 60
           +  +K ++ESPGLTSIPSTY FT N  D + +SE   E S+P+ID+SLLTS++ D+RSK+
Sbjct: 21  ITSIKTISESPGLTSIPSTYIFTPNPDD-QVISE--KEASLPIIDYSLLTSANTDERSKI 77

Query: 61  IQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGT 120
           I +LGKAC+DWGFF VINH VPE LM   +D C  FF+L+EE+K E+ GKHVLDPIRCGT
Sbjct: 78  IYELGKACQDWGFFMVINHGVPESLMRSMIDMCGGFFDLSEEDKEEYRGKHVLDPIRCGT 137

Query: 121 SFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLG 180
           SFNAS EK+FFW+DFLK+  HP FHSP+KP GFSE SLEY +R R++ARELLKGISESLG
Sbjct: 138 SFNASAEKIFFWKDFLKILSHPVFHSPSKPSGFSETSLEYSQRAREIARELLKGISESLG 197

Query: 181 LEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLH 240
           LE  YIE+A+NL+ GLQ++ AN YPPCPQPELAMGMPPHSDHGLL+ L  NGI GLQ+ H
Sbjct: 198 LEANYIEKALNLEEGLQVIAANFYPPCPQPELAMGMPPHSDHGLLSFLIHNGISGLQVQH 257

Query: 241 NGKWVNVN---------------ILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVV 285
            GKWVNVN               ILSNGKY+SV+HRAVVNNK TR+S+A   GPSLD++V
Sbjct: 258 EGKWVNVNGIPNSFLVNIGDHLEILSNGKYRSVLHRAVVNNKATRISIATVQGPSLDSIV 317

Query: 286 EPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVR 328
            P++EL+ER+ +APAY G+KYK++LELQQSN LD K  LDR+R
Sbjct: 318 RPAEELLERERKAPAYTGMKYKEYLELQQSNNLDGKLNLDRLR 360

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224141201|ref|XP_002323963.1| predicted protein [Populus trichocarpa] gi|222866965|gb|EEF04096.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255563204|ref|XP_002522605.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223538081|gb|EEF39692.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296087451|emb|CBI34040.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225465757|ref|XP_002265816.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Vitis vinifera] Back     alignment and taxonomy information
>gi|359475733|ref|XP_003631744.1| PREDICTED: LOW QUALITY PROTEIN: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356524814|ref|XP_003531023.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|225465774|ref|XP_002268015.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Vitis vinifera] gi|296087435|emb|CBI34024.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224141195|ref|XP_002323960.1| predicted protein [Populus trichocarpa] gi|222866962|gb|EEF04093.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224096103|ref|XP_002334715.1| predicted protein [Populus trichocarpa] gi|222874260|gb|EEF11391.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
TAIR|locus:2040575366 AT2G36690 [Arabidopsis thalian 0.729 0.655 0.391 7.1e-45
TAIR|locus:2183429340 KUOX1 "KAR-UP oxidoreductase 1 0.516 0.5 0.368 3.2e-43
TAIR|locus:2042356357 AT2G44800 [Arabidopsis thalian 0.948 0.873 0.333 9.3e-43
TAIR|locus:2081962357 AT3G60290 [Arabidopsis thalian 0.960 0.885 0.325 5.3e-40
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.972 0.893 0.304 2.1e-38
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.820 0.775 0.346 7e-38
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.680 0.656 0.369 4.9e-37
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.699 0.659 0.363 8e-37
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.723 0.655 0.321 1.2e-35
TAIR|locus:2122679353 AT4G25310 [Arabidopsis thalian 0.930 0.866 0.314 4.6e-34
TAIR|locus:2040575 AT2G36690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 99/253 (39%), Positives = 153/253 (60%)

Query:     4 VKALAESPGLTSIPSTYNFTQNQHDHEAVSE--IDPEDSI--PVIDFSLLTSSSPDQRSK 59
             VK L E+ GLT +P+ Y + +        S+  I P  ++  P+IDF+ L    P+ R  
Sbjct:    21 VKHLCEN-GLTKVPTKYIWPEPDRPILTKSDKLIKPNKNLKLPLIDFAELLG--PN-RPH 76

Query:    60 VIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCG 119
             V++ + +AC+ +GFF V+NH +   + +  +D C+RFF L  EE+ ++    +  P+R G
Sbjct:    77 VLRTIAEACKTYGFFQVVNHGMEGDVSKNMIDVCKRFFELPYEERSKYMSSDMSAPVRYG 136

Query:   120 TSFNASVEKVFFWRDFLKVFVHP--EF--HSPNKPVGFSEISLEYCKRIRQVARELLKGI 175
             TSFN   + VF WRDFLK++ HP  ++  H P+ P  F   +  Y K  +++   ++K I
Sbjct:   137 TSFNQIKDNVFCWRDFLKLYAHPLPDYLPHWPSSPSDFRSSAATYAKETKEMFEMMVKAI 196

Query:   176 SESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICG 235
              ESL ++    E A  L+ G Q++V N YPPCP+PEL +GMPPHSD+G LTLL Q+ + G
Sbjct:   197 LESLEIDGSD-EAAKELEEGSQVVVVNCYPPCPEPELTLGMPPHSDYGFLTLLLQDEVEG 255

Query:   236 LQLLHNGKWVNVN 248
             LQ+L+  +WV V+
Sbjct:   256 LQILYRDEWVTVD 268
GO:0005737 "cytoplasm" evidence=ISM
GO:0009058 "biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2183429 KUOX1 "KAR-UP oxidoreductase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042356 AT2G44800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081962 AT3G60290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00031238001
SubName- Full=Chromosome undetermined scaffold_55, whole genome shotgun sequence; (353 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-80
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-71
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-69
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 1e-66
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 3e-66
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-58
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 3e-54
PLN02704335 PLN02704, PLN02704, flavonol synthase 6e-50
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-49
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 1e-44
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-43
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 5e-43
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 5e-41
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 4e-39
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 6e-39
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-38
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-37
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 4e-34
PLN02997325 PLN02997, PLN02997, flavonol synthase 4e-33
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-30
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 3e-27
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 8e-27
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-23
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 9e-23
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-18
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 3e-15
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 3e-11
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-07
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information 
 Score =  249 bits (638), Expect = 1e-80
 Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 38/350 (10%)

Query: 4   VKALAESPGLTSIPSTYNFTQNQH---DHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSKV 60
           VK L +S G+T +P+ Y    +       +          +PVID + L  S    R  V
Sbjct: 28  VKHLCDS-GITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGS---NRPHV 83

Query: 61  IQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGT 120
           +  L  ACR++GFF V+NH VP +++   +D  +RFF L  EE+ ++    +  P+R GT
Sbjct: 84  LATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGT 143

Query: 121 SFNASVEKVFFWRDFLKVFVHPEF----HSPNKPVGFSEISLEYCKRIRQVARELLKGIS 176
           SFN + + VF WRDFLK+  HP      H P+ P    +++  Y K  +++  EL++ I 
Sbjct: 144 SFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKVAATYAKATKRLFLELMEAIL 203

Query: 177 ESLGL-EFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICG 235
           ESLG+ +    E     ++G Q++V N YP CP+PEL +GMPPHSD+G LTLL Q+ + G
Sbjct: 204 ESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEG 263

Query: 236 LQLLHNGKWVNVN---------------ILSNGKYKSVVHRAVVNNKMTRVSLAIANGPS 280
           LQ++H G+WV V                I SNG+YKSV+HR  VN+   R+S+A  +   
Sbjct: 264 LQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLP 323

Query: 281 LDTVVEPSKELIERQSEAPAYIGIKYKD-----FLELQQSNQLDNKSVLD 325
            + VV P+ EL++ Q+        +Y D     FL    S +  +K+ L+
Sbjct: 324 FERVVGPAPELVDEQNPR------RYMDTDFATFLAYLASAEGKHKNFLE 367

Length = 374
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 329
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02485329 oxidoreductase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.89
PLN03176120 flavanone-3-hydroxylase; Provisional 99.88
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.82
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 94.43
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 92.29
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 84.08
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=1e-77  Score=569.60  Aligned_cols=324  Identities=33%  Similarity=0.547  Sum_probs=285.2

Q ss_pred             ChhhhhhhhcCCCCCCCCCCcCCCCCCCcccccCCCCCCCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEEcCC
Q 020233            1 MACVKALAESPGLTSIPSTYNFTQNQHDHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHN   80 (329)
Q Consensus         1 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhG   80 (329)
                      |+.|+.|+++ ++++||+.|++|.++++...........+||+|||+.+.+++.+++++++++|.+||++||||||+|||
T Consensus        14 ~~~~~~l~~~-~~~~vp~~~v~~~~~~p~~~~~~~~~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHG   92 (361)
T PLN02758         14 IDDVQELRKS-KPTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHG   92 (361)
T ss_pred             cccHHHHHhc-CCCCCCHHHcCCchhccccccccccCCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCC
Confidence            4668899874 889999999999998875310000234579999999998766666778899999999999999999999


Q ss_pred             CChHHHHHHHHHHHHHhcCCHHHHHHhhccCCCCCcccccCcccCcccccchhhhccccCCC-----CCCCCCCCcchHH
Q 020233           81 VPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHP-----EFHSPNKPVGFSE  155 (329)
Q Consensus        81 i~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p-----~~~wP~~~~~f~~  155 (329)
                      ||.++++++++++++||+||.|+|+++... +...+||+........+..||+|.|.++..|     ++.||+.+++||+
T Consensus        93 i~~~l~~~~~~~~~~FF~LP~eeK~k~~~~-~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~~~~fr~  171 (361)
T PLN02758         93 IELELLEEIEKVAREFFMLPLEEKQKYPMA-PGTVQGYGQAFVFSEDQKLDWCNMFALGVEPHFIRNPKLWPTKPARFSE  171 (361)
T ss_pred             CCHHHHHHHHHHHHHHhcCCHHHHHHhccc-CCCccccCcccccccccccCeeEEEEeeccCccccccccCccccHHHHH
Confidence            999999999999999999999999998643 3345788655433445567999999876544     5789998899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHcCCChhhHHhhhccCCCceeEEEEeeCCCCCCCcccccCCccCCCceeEEeeCC--C
Q 020233          156 ISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG--I  233 (329)
Q Consensus       156 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~--~  233 (329)
                      .+++|+++|.+|+.+|+++|+++|||++++|.+.  +..+.+.||+||||+|+.++..+|+++|||+|+||||+|++  +
T Consensus       172 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~--~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~v  249 (361)
T PLN02758        172 TLEVYSREIRELCQRLLKYIAMTLGLKEDRFEEM--FGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGSC  249 (361)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCChhhhHHH--hcCccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCCC
Confidence            9999999999999999999999999999999998  66677899999999999988899999999999999999984  8


Q ss_pred             CceEEEeCCeEEEee---------------eeccCcccccccccccCCCCceEEEEEeeCCCCCCeeecChhhhccCCCC
Q 020233          234 CGLQLLHNGKWVNVN---------------ILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEA  298 (329)
Q Consensus       234 ~GLqV~~~g~W~~V~---------------~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~p  298 (329)
                      +||||+++|+|++|+               +||||+||||+|||+.+++++|||++||++|+.|++|.|+++|+++ ++|
T Consensus       250 ~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~-~~p  328 (361)
T PLN02758        250 VGLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDD-ENP  328 (361)
T ss_pred             CCeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCC-CCC
Confidence            999999999999998               9999999999999998878899999999999999999999999998 899


Q ss_pred             CCCccccHHHHHHHHHhccCCCCcccccccC
Q 020233          299 PAYIGIKYKDFLELQQSNQLDNKSVLDRVRV  329 (329)
Q Consensus       299 ~~y~~~t~~ey~~~~~~~~~~~~~~~~~~~~  329 (329)
                      ++|++++|+||+..++++...++..++.++|
T Consensus       329 ~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~~  359 (361)
T PLN02758        329 CKYRRYNHGEYSRHYVTSKLQGKKTLEFAKI  359 (361)
T ss_pred             CcCCCccHHHHHHHHHhcccCchhhhhhhcc
Confidence            9999999999999999998888777776664

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-42
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-42
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 6e-41
1w9y_A319 The Structure Of Acc Oxidase Length = 319 2e-31
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 2e-11
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 2e-11
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 3e-06
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  169 bits (429), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 167/324 (51%), Gaps = 32/324 (9%)
Query: 4   VKALAESPGLTSIPSTYNFTQNQHDHEAVSEIDPEDS------IPVIDFSLLTSSSPDQR 57
           V++LA+S G+ SIP  Y   + + + E+++++  E+       +P ID   + S     R
Sbjct: 6   VESLAKS-GIISIPKEY--IRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIR 62
Query: 58  SKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIR 117
              I++L KA  DWG   +INH +P  LME    A + FF+L+ EEK ++A       I+
Sbjct: 63  ENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQ 122
Query: 118 -CGTSFNASVEKVFFWRDFLKVFVHPEFHS-----PNKPVGFSEISLEYCKRIRQVAREL 171
             G+    +      W D+     +PE        P  P  + E + EY K +R +A ++
Sbjct: 123 GYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKV 182
Query: 172 LKGISESLGLEFCYIERAM-NLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQ 230
            K +S  LGLE   +E+ +  L+  L  +  N YP CPQPELA+G+  H+D   LT +  
Sbjct: 183 FKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH 242
Query: 231 NGICGLQLLHNGKWV---------------NVNILSNGKYKSVVHRAVVNNKMTRVSLAI 275
           N + GLQL + GKWV                + ILSNGKYKS++HR +VN +  R+S A+
Sbjct: 243 NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAV 302
Query: 276 ANGPSLDTVV-EPSKELIERQSEA 298
              P  D +V +P  E++  +S A
Sbjct: 303 FCEPPKDKIVLKPLPEMVSVESPA 326
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-122
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-108
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 5e-83
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-61
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-60
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 3e-60
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  353 bits (909), Expect = e-122
 Identities = 110/353 (31%), Positives = 170/353 (48%), Gaps = 33/353 (9%)

Query: 4   VKALAESPGLTSIPSTYNFTQNQ----HDHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSK 59
           V++LA+S G+ SIP  Y   + +    +D     + +    +P ID   + S     R  
Sbjct: 7   VESLAKS-GIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIREN 65

Query: 60  VIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIR-C 118
            I++L KA  DWG   +INH +P  LME    A + FF+L+ EEK ++A       I+  
Sbjct: 66  CIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGY 125

Query: 119 GTSFNASVEKVFFWRDFLKVFVHPEFHS-----PNKPVGFSEISLEYCKRIRQVARELLK 173
           G+    +      W D+     +PE        P  P  + E + EY K +R +A ++ K
Sbjct: 126 GSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFK 185

Query: 174 GISESLGLEFCYIERAMN-LDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG 232
            +S  LGLE   +E+ +  L+  L  +  N YP CPQPELA+G+  H+D   LT +  N 
Sbjct: 186 ALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM 245

Query: 233 ICGLQLLHNGKWVNVN---------------ILSNGKYKSVVHRAVVNNKMTRVSLAIAN 277
           + GLQL + GKWV                  ILSNGKYKS++HR +VN +  R+S A+  
Sbjct: 246 VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFC 305

Query: 278 GPSLDTVV-EPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVRV 329
            P  D +V +P  E++  +S    +    +   +E    ++L  K   + V  
Sbjct: 306 EPPKDKIVLKPLPEMVSVESP-AKFPPRTFAQHIE----HKLFGKEQEELVSE 353
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query329
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 89.86
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 87.02
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2.6e-78  Score=573.25  Aligned_cols=319  Identities=33%  Similarity=0.547  Sum_probs=282.8

Q ss_pred             ChhhhhhhhcCCCCCCCCCCcCCCCCCCccccc--CC--CCCCCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEE
Q 020233            1 MACVKALAESPGLTSIPSTYNFTQNQHDHEAVS--EI--DPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTV   76 (329)
Q Consensus         1 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~--~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l   76 (329)
                      +++|++|+++ ++.+||++|++|+++++.....  ..  ....+||||||+.|.++++++|.+++++|.+||++||||||
T Consensus         4 ~~~v~~l~~~-~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v   82 (356)
T 1gp6_A            4 VERVESLAKS-GIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL   82 (356)
T ss_dssp             CCCHHHHHHT-TCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             cccHHHHHhc-CCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence            5789999985 7899999999998877653100  00  01246999999999877777788999999999999999999


Q ss_pred             EcCCCChHHHHHHHHHHHHHhcCCHHHHHHhhccCC-CCCcccccCcccCcccccchhhhccccCCC-----CCCCCCCC
Q 020233           77 INHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHV-LDPIRCGTSFNASVEKVFFWRDFLKVFVHP-----EFHSPNKP  150 (329)
Q Consensus        77 ~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p-----~~~wP~~~  150 (329)
                      +|||||.++++++++.+++||+||.|+|+++..... ...+||+........+..||+|.|.+...|     .|.||+.+
T Consensus        83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~  162 (356)
T 1gp6_A           83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP  162 (356)
T ss_dssp             ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSS
T ss_pred             eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcc
Confidence            999999999999999999999999999999965443 356889866544456688999999887543     47799999


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhhHHhhhccC---CCceeEEEEeeCCCCCCCcccccCCccCCCceeE
Q 020233          151 VGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLD---SGLQILVANLYPPCPQPELAMGMPPHSDHGLLTL  227 (329)
Q Consensus       151 ~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~---~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~g~lTl  227 (329)
                      |+|++.+++|+++|.+|+.+||++||++|||++++|.+.  +.   .+.+.||++|||||+.++..+|+++|||+|+|||
T Consensus       163 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~--~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTl  240 (356)
T 1gp6_A          163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKE--VGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF  240 (356)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHH--TTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEE
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH--hcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEE
Confidence            999999999999999999999999999999999999998  54   4678899999999999888999999999999999


Q ss_pred             EeeCCCCceEEEeCCeEEEee---------------eeccCcccccccccccCCCCceEEEEEeeCCCCCC-eeecChhh
Q 020233          228 LTQNGICGLQLLHNGKWVNVN---------------ILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDT-VVEPSKEL  291 (329)
Q Consensus       228 L~qd~~~GLqV~~~g~W~~V~---------------~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~p~~d~-~i~pl~~~  291 (329)
                      |+||+++||||+++|+|++|+               +||||+||||.|||+.+++.+|||++||++|+.|+ +|.|+++|
T Consensus       241 L~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~  320 (356)
T 1gp6_A          241 ILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEM  320 (356)
T ss_dssp             EEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGG
T ss_pred             EEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhh
Confidence            999999999999999999999               99999999999999998888999999999999999 99999999


Q ss_pred             hccCCCCCCCccccHHHHHHHHHhccCCCCcc
Q 020233          292 IERQSEAPAYIGIKYKDFLELQQSNQLDNKSV  323 (329)
Q Consensus       292 ~~~~~~p~~y~~~t~~ey~~~~~~~~~~~~~~  323 (329)
                      +++ ++|++|+++|++||+..++.++++++..
T Consensus       321 ~~~-~~p~~y~~~t~~eyl~~~~~~~~d~~~~  351 (356)
T 1gp6_A          321 VSV-ESPAKFPPRTFAQHIEHKLFGKEQEELV  351 (356)
T ss_dssp             CCS-SSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred             cCC-CCCccCCCccHHHHHHHHHHhccCcchh
Confidence            998 8999999999999999999888776543
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 329
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 2e-59
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-53
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 1e-43
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-39
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  192 bits (488), Expect = 2e-59
 Identities = 105/337 (31%), Positives = 166/337 (49%), Gaps = 33/337 (9%)

Query: 4   VKALAESPGLTSIPSTYNFTQNQHDHEAVSEIDPED------SIPVIDFSLLTSSSPDQR 57
           V++LA+S G+ SIP    + + + + E+++++  E+       +P ID   + S     R
Sbjct: 6   VESLAKS-GIISIPK--EYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIR 62

Query: 58  SKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIR 117
              I++L KA  DWG   +INH +P  LME    A + FF+L+ EEK ++A       I+
Sbjct: 63  ENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQ 122

Query: 118 C-GTSFNASVEKVFFWRDFLKVFVHPEFHSP-----NKPVGFSEISLEYCKRIRQVAREL 171
             G+    +      W D+     +PE           P  + E + EY K +R +A ++
Sbjct: 123 GYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKV 182

Query: 172 LKGISESLGLEFCYIERAMN-LDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQ 230
            K +S  LGLE   +E+ +  L+  L  +  N YP CPQPELA+G+  H+D   LT +  
Sbjct: 183 FKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH 242

Query: 231 NGICGLQLLHNGKWVNVN---------------ILSNGKYKSVVHRAVVNNKMTRVSLAI 275
           N + GLQL + GKWV                  ILSNGKYKS++HR +VN +  R+S A+
Sbjct: 243 NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAV 302

Query: 276 ANGPSLDTVV-EPSKELIERQSEAPAYIGIKYKDFLE 311
              P  D +V +P  E++        +    +   +E
Sbjct: 303 FCEPPKDKIVLKPLPEMVS-VESPAKFPPRTFAQHIE 338
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query329
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-73  Score=538.96  Aligned_cols=313  Identities=32%  Similarity=0.547  Sum_probs=270.0

Q ss_pred             hhhhhhhhcCCCCCCCCCCcCCCCCCCcccc----cCCCCCCCCcEEecCCCCCCChhHHHHHHHHHHHHHHhccEEEEE
Q 020233            2 ACVKALAESPGLTSIPSTYNFTQNQHDHEAV----SEIDPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVI   77 (329)
Q Consensus         2 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~l~   77 (329)
                      .-|++||++ |+++||++|++|+.+++....    ....+..+||||||+.|.+++++.|++++++|.+||+++|||||+
T Consensus         4 ~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           4 ERVESLAKS-GIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCHHHHHHT-TCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             cchHHHHhC-CCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            358999985 999999999999998887520    011456789999999999889888999999999999999999999


Q ss_pred             cCCCChHHHHHHHHHHHHHhcCCHHHHHHhhccCCCC-CcccccCcccCcccccchhhhcccc-----CCCCCCCCCCCc
Q 020233           78 NHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLD-PIRCGTSFNASVEKVFFWRDFLKVF-----VHPEFHSPNKPV  151 (329)
Q Consensus        78 nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~-~~gy~~~~~~~~~~~~d~~e~~~~~-----~~p~~~wP~~~~  151 (329)
                      |||||.++++++++++++||+||.|+|+++....... ..+|+........+..+|.+.+...     ....+.||+.++
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~  162 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  162 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccc
Confidence            9999999999999999999999999999996543222 2344433333444556666544322     123578999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhhHHhhhcc-CCCceeEEEEeeCCCCCCCcccccCCccCCCceeEEee
Q 020233          152 GFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNL-DSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQ  230 (329)
Q Consensus       152 ~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~-~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q  230 (329)
                      .|++.+++|+++|.+|+.+|+++++++||+++++|.+.+.. +...+.||++||||++.+...+|+++|||+|+||||+|
T Consensus       163 ~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q  242 (349)
T d1gp6a_         163 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH  242 (349)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEec
Confidence            99999999999999999999999999999999999887321 34567899999999999888999999999999999999


Q ss_pred             CCCCceEEEeCCeEEEee---------------eeccCcccccccccccCCCCceEEEEEeeCCCCCCee-ecChhhhcc
Q 020233          231 NGICGLQLLHNGKWVNVN---------------ILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVV-EPSKELIER  294 (329)
Q Consensus       231 d~~~GLqV~~~g~W~~V~---------------~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~p~~d~~i-~pl~~~~~~  294 (329)
                      +.++||||.++|+|++|+               +||||+||||+|||+.+++.+||||+||++|+.|++| .|+|+|+++
T Consensus       243 ~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~  322 (349)
T d1gp6a_         243 NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSV  322 (349)
T ss_dssp             CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCS
T ss_pred             cCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCC
Confidence            999999999999999999               9999999999999999988999999999999999875 899999999


Q ss_pred             CCCCCCCccccHHHHHHHHHhc
Q 020233          295 QSEAPAYIGIKYKDFLELQQSN  316 (329)
Q Consensus       295 ~~~p~~y~~~t~~ey~~~~~~~  316 (329)
                       ++|++|+|||++||++.|+..
T Consensus       323 -~~p~~y~~~t~~e~~~~rl~~  343 (349)
T d1gp6a_         323 -ESPAKFPPRTFAQHIEHKLFG  343 (349)
T ss_dssp             -SSCCSSCCEEHHHHHHHHHHH
T ss_pred             -CCCCCCCCccHHHHHHHHHhc
Confidence             999999999999999998743
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure