Citrus Sinensis ID: 020264

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFGTIR
ccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccEEEEccccccccccccHHHHHHHHHcccccccccccEEEEcHHHHHHHHHHcHHccccccccHHHHHHHHHHHHHHccccccccccccEEEccEEEEEcccccccccccEEEEEEEEccccccccccccEEEEEEccEEEcccccccccccccccHHHHHHHHHHHHccccEEEEEcccccccEEEccccEEEEEEccEEEcccccccccccccHHHHHHHHHHccccEEEEEcccccc
cccccHHHHHHHHHHccccccccccccccccccEEEcccccccEEEEEcccccccHHHHHHHHcccccccccccEEEEEEEEccEEcccEEEEcccEEEcccEHHHHcccEEEccEEEEEEcccEEEEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHcccccccEEEEEEEEEEccEcccccccccEEEEEEEEEEccccHHHcccEEEEEEccEEEEccccccccccccHHHHHHHHHHHHHHcccccEEEEEcccccEEEEccccEEEEEEccEEEcccccccccccccHHHHHHHHHHccccEEEEEEEEEcc
MMRPATMIRNACLRNFsqslrvgsaflksgdfcRYTSQAAASLQqdcepsaysddesadhmdwdnlgfgltpadymytmkcsndyfekgrlsrygkielspssgvlnygQGLFEGMKAYRKedgqlvlfrpdqnairlqtgaermcmpspsiDQFIDAVKQTALankrwvpppgkgslyirpllvgsgpilglapapeytflvfaspvgnyfkeglaplnlyvedefhratpggaggvkaISNYAPVLKAISRAknrgfsdvlYLDSVnkknleevsscnifilkgniistpatsgtilaGITRKSIIEIAsdcgfqvrypllfgtir
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKielspssgvLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALAnkrwvpppgkGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKgniistpatsgtILAGITRKSIIEiasdcgfqvrypllfgtir
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFGTIR
*******IRNACLRNFSQSLRVGSAFLKSGDFCRYTS***********************MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFGT**
**************************************************************WDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFG*IR
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQA*****************SADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFGTIR
****ATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFGTIR
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFGTIR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query328 2.2.26 [Sep-21-2011]
Q9M439388 Branched-chain-amino-acid yes no 0.871 0.737 0.731 1e-125
Q9FYA6415 Branched-chain-amino-acid no no 0.932 0.737 0.633 1e-113
Q9M401413 Branched-chain-amino-acid no no 0.801 0.636 0.699 1e-111
Q93Y32384 Branched-chain-amino-acid no no 0.939 0.802 0.621 1e-108
Q9LPM9356 Branched-chain-amino-acid no no 0.804 0.741 0.616 5e-99
Q9LPM8367 Putative branched-chain-a no no 0.804 0.719 0.627 1e-98
Q9LE06354 Methionine aminotransfera no no 0.820 0.759 0.536 2e-87
O31461356 Branched-chain-amino-acid yes no 0.786 0.724 0.438 4e-56
P39576363 Branched-chain-amino-acid no no 0.774 0.699 0.421 2e-55
O86505362 Probable branched-chain-a yes no 0.823 0.745 0.394 8e-54
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Back     alignment and function desciption
 Score =  446 bits (1148), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/290 (73%), Positives = 252/290 (86%), Gaps = 4/290 (1%)

Query: 32  FCRYTSQAAASLQQDCEPSAYS--DDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEK 88
           F +Y +QAA++L+++ +   Y   DD  AD +DWDNLGFGL PADYMY MKCS D  F +
Sbjct: 26  FAKYNAQAASALREERKKPLYQNGDDVYAD-LDWDNLGFGLNPADYMYVMKCSKDGEFTQ 84

Query: 89  GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
           G LS YG I+LSPS+GVLNYGQ ++EG KAYRKE+G+L+LFRPD NAIR++ GAERM MP
Sbjct: 85  GELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMP 144

Query: 149 SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPV 208
           SPS+DQF++AVKQTALANKRWVPP GKG+LYIRPLL+GSGPILGL PAPEYTF+V+ASPV
Sbjct: 145 SPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPV 204

Query: 209 GNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSV 268
           GNYFKEG+A LNLYVE+E+ RA PGGAGGVK+I+NYAPVLKA+SRAK+RGFSDVLYLDSV
Sbjct: 205 GNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSV 264

Query: 269 NKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQV 318
            KK LEE SSCN+F++KG  ISTPAT+GTIL GITRKS++EIASD G+QV
Sbjct: 265 KKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQV 314
Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Back     alignment and function description
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Back     alignment and function description
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1 Back     alignment and function description
>sp|O31461|ILVE1_BACSU Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis (strain 168) GN=ilvE PE=1 SV=1 Back     alignment and function description
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis (strain 168) GN=ilvK PE=1 SV=5 Back     alignment and function description
>sp|O86505|ILVE_STRCO Probable branched-chain-amino-acid aminotransferase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=ilvE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query328
302142143387 unnamed protein product [Vitis vinifera] 0.945 0.801 0.743 1e-131
225458938387 PREDICTED: branched-chain-amino-acid ami 0.945 0.801 0.737 1e-131
255537936399 branched-chain amino acid aminotransfera 0.939 0.771 0.700 1e-128
449450320390 PREDICTED: branched-chain-amino-acid ami 0.884 0.743 0.744 1e-125
288310302389 branched chain amino acid transaminase [ 0.853 0.719 0.758 1e-124
15218409388 branched-chain-amino-acid aminotransfera 0.871 0.737 0.731 1e-123
297843816388 ATBCAT-2 [Arabidopsis lyrata subsp. lyra 0.871 0.737 0.720 1e-122
14280354385 branched-chain amino acid aminotransfera 0.935 0.797 0.661 1e-121
359492522379 PREDICTED: branched-chain-amino-acid ami 0.804 0.696 0.786 1e-120
407317193393 mitochodrial branched-chain aminotransfe 0.945 0.788 0.676 1e-119
>gi|302142143|emb|CBI19346.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 232/312 (74%), Positives = 264/312 (84%), Gaps = 2/312 (0%)

Query: 9   RNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGF 68
           R AC RN   SLR GS   K      +TS+ A SLQ   EPS YSDDE AD +DWDNLGF
Sbjct: 4   RRACFRNLILSLRTGSTASKLRSSNCFTSRTAPSLQPLVEPSPYSDDEYAD-VDWDNLGF 62

Query: 69  GLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLV 127
           GL P DYMYT KCS    FE+G LSRYG IELSPS+GVLNYGQGLFEG KAYR+E+G+L 
Sbjct: 63  GLIPTDYMYTTKCSEGGNFEEGHLSRYGNIELSPSAGVLNYGQGLFEGTKAYRRENGRLC 122

Query: 128 LFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGS 187
           LFRPDQNAIR+Q GAERMCMPSPSI  F++AVKQTALANKRW+PPPGKGSLYIRPLL+GS
Sbjct: 123 LFRPDQNAIRMQVGAERMCMPSPSIHHFVEAVKQTALANKRWIPPPGKGSLYIRPLLMGS 182

Query: 188 GPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPV 247
           GP+LGL PAPE TFL++ASPVGNYFK+  APLNL+++DE+HRAT GGAGGVKAI+NY+PV
Sbjct: 183 GPVLGLGPAPECTFLIYASPVGNYFKQVSAPLNLFIDDEYHRATRGGAGGVKAITNYSPV 242

Query: 248 LKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSI 307
           LKA SRAK+RGFSDVL+LDSVNKKN+EEVSSCNIFI+K N+ISTPAT GTIL G+TRKSI
Sbjct: 243 LKAQSRAKSRGFSDVLFLDSVNKKNIEEVSSCNIFIVKDNVISTPATGGTILEGVTRKSI 302

Query: 308 IEIASDCGFQVR 319
           I+IA D G+QV+
Sbjct: 303 IDIALDHGYQVK 314

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225458938|ref|XP_002285511.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] gi|302142142|emb|CBI19345.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255537936|ref|XP_002510033.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223550734|gb|EEF52220.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449450320|ref|XP_004142911.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] gi|449494398|ref|XP_004159536.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|288310302|gb|ADC45390.1| branched chain amino acid transaminase [Cucumis melo] Back     alignment and taxonomy information
>gi|15218409|ref|NP_172478.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|79317492|ref|NP_001031015.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|26391680|sp|Q9M439.1|BCAT2_ARATH RecName: Full=Branched-chain-amino-acid aminotransferase 2, chloroplastic; Short=Atbcat-2; Flags: Precursor gi|13877745|gb|AAK43950.1|AF370135_1 putative tat-binding protein [Arabidopsis thaliana] gi|8249004|emb|CAB93128.1| branched-chain amino acid transaminase [Arabidopsis thaliana] gi|15293209|gb|AAK93715.1| putative tat-binding protein [Arabidopsis thaliana] gi|222424474|dbj|BAH20192.1| AT1G10070 [Arabidopsis thaliana] gi|332190416|gb|AEE28537.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|332190417|gb|AEE28538.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297843816|ref|XP_002889789.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] gi|297335631|gb|EFH66048.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|14280354|gb|AAK57535.1| branched-chain amino acid aminotransferase [Capsicum annuum] Back     alignment and taxonomy information
>gi|359492522|ref|XP_002285506.2| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|407317193|gb|AFU07634.1| mitochodrial branched-chain aminotransferase 1 [Humulus lupulus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query328
TAIR|locus:2201921388 BCAT-2 "branched-chain amino a 0.871 0.737 0.731 7.3e-114
TAIR|locus:2097320413 BCAT3 "branched-chain aminotra 0.798 0.634 0.701 1.1e-101
TAIR|locus:2201931384 BCAT-1 "branched-chain amino a 0.939 0.802 0.621 7.4e-98
TAIR|locus:2031040367 BCAT7 "branched-chain amino ac 0.850 0.760 0.606 4.5e-91
TAIR|locus:2031030356 AT1G50110 [Arabidopsis thalian 0.801 0.738 0.618 4.5e-91
TAIR|locus:2091216354 BCAT4 "branched-chain aminotra 0.817 0.757 0.538 5.8e-82
UNIPROTKB|A0R066368 ilvE "Branched-chain-amino-aci 0.774 0.690 0.407 2.4e-51
TIGR_CMR|GSU_0656357 GSU_0656 "branched-chain amino 0.814 0.747 0.393 1.5e-49
UNIPROTKB|Q10399368 ilvE "Branched-chain-amino-aci 0.768 0.684 0.414 6.7e-49
TIGR_CMR|SO_0340363 SO_0340 "branched-chain amino 0.835 0.754 0.351 5.9e-41
TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
 Identities = 212/290 (73%), Positives = 252/290 (86%)

Query:    32 FCRYTSQAAASLQQDCEPSAYS--DDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEK 88
             F +Y +QAA++L+++ +   Y   DD  AD +DWDNLGFGL PADYMY MKCS D  F +
Sbjct:    26 FAKYNAQAASALREERKKPLYQNGDDVYAD-LDWDNLGFGLNPADYMYVMKCSKDGEFTQ 84

Query:    89 GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
             G LS YG I+LSPS+GVLNYGQ ++EG KAYRKE+G+L+LFRPD NAIR++ GAERM MP
Sbjct:    85 GELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMP 144

Query:   149 SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPV 208
             SPS+DQF++AVKQTALANKRWVPP GKG+LYIRPLL+GSGPILGL PAPEYTF+V+ASPV
Sbjct:   145 SPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPV 204

Query:   209 GNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSV 268
             GNYFKEG+A LNLYVE+E+ RA PGGAGGVK+I+NYAPVLKA+SRAK+RGFSDVLYLDSV
Sbjct:   205 GNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSV 264

Query:   269 NKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQV 318
              KK LEE SSCN+F++KG  ISTPAT+GTIL GITRKS++EIASD G+QV
Sbjct:   265 KKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQV 314
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0340 SO_0340 "branched-chain amino acid aminotransferase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M439BCAT2_ARATH2, ., 6, ., 1, ., 4, 20.73100.87190.7371yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.6.10.963
4th Layer2.6.1.420.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ATBCAT-2
ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic; Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. ; Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine (By similarity) (388 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT1G21400
2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / br [...] (472 aa)
   • •• 0.985
BCDH_BETA1
BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT); 3-methyl-2-oxobutano [...] (352 aa)
   • •• 0.980
AT3G23940
dehydratase family; dehydratase family; FUNCTIONS IN- catalytic activity, dihydroxy-acid dehydr [...] (608 aa)
•  •••• 0.979
DIN4
DIN4 (DARK INDUCIBLE 4); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [...] (358 aa)
   • •• 0.967
MAM1
MAM1 (METHYLTHIOALKYLMALATE SYNTHASE 1); 2-isopropylmalate synthase/ methylthioalkylmalate synt [...] (506 aa)
•    •• 0.960
IMS2
IMS2 (2-ISOPROPYLMALATE SYNTHASE 2); 2-isopropylmalate synthase/ methylthioalkylmalate synthase [...] (503 aa)
•    •• 0.943
MAML-4
MAML-4 (METHYLTHIOALKYLMALATE SYNTHASE-LIKE 4); 2-isopropylmalate synthase; Encodes an active A [...] (631 aa)
•    •• 0.936
IMS1
IMS1 (2-ISOPROPYLMALATE SYNTHASE 1); 2-isopropylmalate synthase; Encodes an active Arabidopsis [...] (631 aa)
•    •• 0.934
EMB2247
EMB2247 (embryo defective 2247); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / vali [...] (970 aa)
     •• 0.917
EMB2369
EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucl [...] (973 aa)
     •• 0.917

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query328
PLN02782403 PLN02782, PLN02782, Branched-chain amino acid amin 1e-171
PLN02259388 PLN02259, PLN02259, branched-chain-amino-acid amin 1e-157
PLN03117355 PLN03117, PLN03117, Branched-chain-amino-acid amin 1e-142
PLN02883384 PLN02883, PLN02883, Branched-chain amino acid amin 1e-135
PRK13357356 PRK13357, PRK13357, branched-chain amino acid amin 1e-127
cd01557279 cd01557, BCAT_beta_family, BCAT_beta_family: Branc 1e-101
TIGR01123313 TIGR01123, ilvE_II, branched-chain amino acid amin 4e-92
cd00449256 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen 3e-66
COG0115284 COG0115, IlvE, Branched-chain amino acid aminotran 4e-58
PRK06606306 PRK06606, PRK06606, branched-chain amino acid amin 4e-27
TIGR01122298 TIGR01122, ilvE_I, branched-chain amino acid amino 2e-26
pfam01063231 pfam01063, Aminotran_4, Aminotransferase class IV 6e-23
cd01559249 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor 3e-19
cd01558270 cd01558, D-AAT_like, D-Alanine aminotransferase (D 5e-19
PRK13356286 PRK13356, PRK13356, aminotransferase; Provisional 2e-16
PRK08320288 PRK08320, PRK08320, branched-chain amino acid amin 2e-15
PRK07849292 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyas 7e-12
PRK07544292 PRK07544, PRK07544, branched-chain amino acid amin 9e-12
PRK06092268 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas 9e-07
PRK12479299 PRK12479, PRK12479, branched-chain amino acid amin 1e-06
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 2e-05
TIGR01121276 TIGR01121, D_amino_aminoT, D-amino acid aminotrans 2e-05
PRK07650283 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyas 4e-05
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 0.003
>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase Back     alignment and domain information 
 Score =  480 bits (1236), Expect = e-171
 Identities = 202/302 (66%), Positives = 240/302 (79%), Gaps = 8/302 (2%)

Query: 18  QSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMY 77
            +  V S  + S         A +S       S+Y++      +DWDNLGFGL P DYMY
Sbjct: 34  SNSSVSSNPISSKAISLTRCDAVSS-------SSYTEVTELADIDWDNLGFGLVPTDYMY 86

Query: 78  TMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAI 136
            MKC+ D  F KG L R+G IELSPS+GVLNYGQGLFEG+KAYRKEDG ++LFRP++NAI
Sbjct: 87  IMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPEENAI 146

Query: 137 RLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA 196
           R++ GAERMCMP+P+++QF++AVK+T LANKRWVPPPGKGSLYIRPLL+GSG +LGLAPA
Sbjct: 147 RMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPA 206

Query: 197 PEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKN 256
           PEYTFL++ SPVGNYFKEG+AP+NL VE+EFHRATPGG GGVK I NYA VLKA S AK 
Sbjct: 207 PEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKA 266

Query: 257 RGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGF 316
           +G+SDVLYLD V+KK LEEVSSCNIFI+K N+ISTPA  GTIL GITRKSII++A   GF
Sbjct: 267 KGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPAIKGTILPGITRKSIIDVARSQGF 326

Query: 317 QV 318
           QV
Sbjct: 327 QV 328

Length = 403
>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>gnl|CDD|216275 pfam01063, Aminotran_4, Aminotransferase class IV Back     alignment and domain information
>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>gnl|CDD|237362 PRK13356, PRK13356, aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|236114 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|181025 PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|183549 PRK12479, PRK12479, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information
>gnl|CDD|130191 TIGR01121, D_amino_aminoT, D-amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|181067 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 328
PLN02883384 Branched-chain amino acid aminotransferase 100.0
PLN02259388 branched-chain-amino-acid aminotransferase 2 100.0
KOG0975379 consensus Branched chain aminotransferase BCAT1, p 100.0
PLN02782403 Branched-chain amino acid aminotransferase 100.0
PLN03117355 Branched-chain-amino-acid aminotransferase; Provis 100.0
PRK13357356 branched-chain amino acid aminotransferase; Provis 100.0
TIGR01123313 ilvE_II branched-chain amino acid aminotransferase 100.0
TIGR01122298 ilvE_I branched-chain amino acid aminotransferase, 100.0
COG0115284 IlvE Branched-chain amino acid aminotransferase/4- 100.0
PRK06606306 branched-chain amino acid aminotransferase; Valida 100.0
cd01557279 BCAT_beta_family BCAT_beta_family: Branched-chain 100.0
PRK07544292 branched-chain amino acid aminotransferase; Valida 100.0
PRK12479299 branched-chain amino acid aminotransferase; Provis 100.0
PRK08320288 branched-chain amino acid aminotransferase; Review 100.0
PRK13356286 aminotransferase; Provisional 100.0
cd01558270 D-AAT_like D-Alanine aminotransferase (D-AAT_like) 100.0
PRK07650283 4-amino-4-deoxychorismate lyase; Provisional 100.0
PRK07849292 4-amino-4-deoxychorismate lyase; Provisional 100.0
PRK06680286 D-amino acid aminotransferase; Reviewed 100.0
TIGR03461261 pabC_Proteo aminodeoxychorismate lyase. Members of 100.0
TIGR01121276 D_amino_aminoT D-amino acid aminotransferase. Spec 100.0
PRK12400290 D-amino acid aminotransferase; Reviewed 100.0
PLN02845336 Branched-chain-amino-acid aminotransferase-like pr 100.0
cd01559249 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya 100.0
PRK06092268 4-amino-4-deoxychorismate lyase; Reviewed 100.0
cd00449256 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes 100.0
PRK09266266 hypothetical protein; Provisional 100.0
PRK07546209 hypothetical protein; Provisional 99.97
PF01063231 Aminotran_4: Aminotransferase class IV; InterPro: 99.97
PRK07101187 hypothetical protein; Provisional 99.93
>PLN02883 Branched-chain amino acid aminotransferase Back     alignment and domain information 
Probab=100.00  E-value=4.3e-76  Score=576.21  Aligned_cols=315  Identities=62%  Similarity=0.984  Sum_probs=293.3

Q ss_pred             HHHH-hhhhhhccccccccCccccchhhhhhccccccCCCCCCCCCccCCCCCCCCCccccccCceEEEEecc-ceEECC
Q 020264           12 CLRN-FSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKG   89 (328)
Q Consensus        12 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~-~~w~~g   89 (328)
                      .||+ |.|++.+++-.+..+.+.++.+++..++...+.......++..+++||++|+||.+|||||++++|.+ ++|+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~~~   81 (384)
T PLN02883          2 ALRRCLPQSSTTSSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDKLGFSLVRTDFMFATKSCRDGNFEQG   81 (384)
T ss_pred             chhhhccccccchhhhhccccceeccccccccchhhhcccccccccccccCCchhcCcCCeecCceEEEEEcCCCcccCC
Confidence            4666 78888888878899999999999888875444444456777888999999999999999999999886 489999


Q ss_pred             eEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCc
Q 020264           90 RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRW  169 (328)
Q Consensus        90 ~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~  169 (328)
                      +|+|+++++++|++++||||||||||||+|+++||++++||+++|++||++||++|+||.++.++|.++|+++++.|+.|
T Consensus        82 ~i~p~~~l~l~p~a~~l~YGdgvFEg~kayr~~dG~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~~w  161 (384)
T PLN02883         82 YLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRILLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRW  161 (384)
T ss_pred             eEeeCCCcccCccccHhhcceeeeeeEEEEECCCCCEeeeChhHHHHHHHHHHHHhCCCCcCHHHHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCceEEEEEEEEecCCcccccCCCCcEEEEEEeecCccccCCcccEEEEeeccceecCCCCCCCCcccCChHHHHH
Q 020264          170 VPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLK  249 (328)
Q Consensus       170 vP~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~i~~~P~~~y~~~G~~~v~l~v~~~~~R~~p~~~~~~Kt~~nY~~~l~  249 (328)
                      ||+.+++++||||+++++++.+|+.++.+++|+|+++|+++|+++|++++++.+++.++|++|++++++|++|||+++++
T Consensus       162 vp~~~~~~lYIRp~v~~~~~~lG~~~~~~~~~~i~~~p~~~y~~~g~~~v~l~~~~~~~Ra~~~g~g~~K~~~nYa~~ll  241 (384)
T PLN02883        162 VPPPGKGSLYLRPLLFGSGASLGVAAAPEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPVLE  241 (384)
T ss_pred             CCCCCCceEEEEEEEEecCCccCCCCCCCeEEEEEEEecccccccCcceEEEEECccccccCCCCCcccchhhhHHHHHH
Confidence            99987789999999999988899998888999999999999998899999999988789999999999999999999999


Q ss_pred             HHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCCCCcchHHHHHHHHHHHHCCCeEEEEeeecc
Q 020264          250 AISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFGT  326 (328)
Q Consensus       250 a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~~ILpGITR~svlela~~~G~~VeEr~i~~~  326 (328)
                      ++++|+++||||+||||+.++|+|+|++++|||++++++|+||+++++|||||||++||++|+++|++|+||+|+.+
T Consensus       242 a~~eA~~~G~de~L~Ld~~~~~~V~E~~~sNlF~v~~~~l~TP~l~~~iLpGITR~svl~la~~~G~~V~Er~i~~~  318 (384)
T PLN02883        242 VMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNIIVTPATSGTILGGITRKSIIEIALDLGYKVEERRVPVE  318 (384)
T ss_pred             HHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEeCCCcCCcCcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence            99999999999999999855689999999999999999999999999999999999999999999999999999864

>PLN02259 branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02782 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>PRK13357 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK06606 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>PRK07544 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK12479 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>PRK08320 branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK13356 aminotransferase; Provisional Back     alignment and domain information
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>PRK06680 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase Back     alignment and domain information
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase Back     alignment and domain information
>PRK12400 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>PRK09266 hypothetical protein; Provisional Back     alignment and domain information
>PRK07546 hypothetical protein; Provisional Back     alignment and domain information
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK07101 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query328
4dqn_A345 Crystal Structure Of The Branched-Chain Aminotransf 1e-58
3jz6_A373 Crystal Structure Of Mycobacterium Smegmatis Branch 5e-53
3dtf_A372 Structural Analysis Of Mycobacterial Branched Chain 5e-53
3ht5_A368 Crystal Structure Of Ilve A Branched Chain Amino Ac 1e-52
3uyy_A358 Crystal Structures Of Branched-Chain Aminotransfera 3e-50
1ekf_A365 Crystallographic Structure Of Human Branched Chain 8e-37
2hg8_A365 Crystal Structure Of Cys315ala Mutant Of Human Mito 9e-37
2hgw_A365 Crystal Structure Of Cys318ala Mutant Of Human Mito 9e-37
2hdk_A365 Crystal Structure Of Cys315ala-Cys318ala Mutant Of 1e-36
2cog_A386 Crystal Structure Of Oxidized Human Cytosolic Branc 8e-36
2hhf_B365 X-ray Crystal Structure Of Oxidized Human Mitochond 2e-35
2abj_A366 Crystal Structure Of Human Branched Chain Amino Aci 4e-35
2hhf_A365 X-ray Crystal Structure Of Oxidized Human Mitochond 1e-34
1i1k_A309 Crystal Structure Of Eschelichia Coli Branched-chai 2e-17
1a3g_A308 Branched-chain Amino Acid Aminotransferase From Esc 4e-17
3u0g_A328 Crystal Structure Of Branched-Chain Amino Acid Amin 5e-12
1wrv_A308 Crystal Structure Of T.Th.Hb8 Branched-Chain Amino 1e-10
>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345 Back     alignment and structure 
Iteration: 1

 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/254 (46%), Positives = 155/254 (61%), Gaps = 3/254 (1%)
Query: 61  MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
           +DW NLGF      + Y     +  ++ G+L+    + +S SS  L+YGQ  FEG+KAYR
Sbjct: 9   LDWKNLGFEYHKLPFRYISYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYR 68
Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLY 179
            +DG + LFRP+ NA RLQ  A+R+ MP    D+FIDA KQ   AN+ +VPP G G +LY
Sbjct: 69  TKDGSVQLFRPNMNAERLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLY 128
Query: 180 IRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 239
           +RPLL+G G ++G+ PA EY F +FA PVGNYFK GLAP N  ++D++ RA P G G  K
Sbjct: 129 LRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGAAK 188
Query: 240 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIF-ILKGNIISTPATSGTI 298
              NYA  L     A  R FSDV+YLD      +EEV S N F I K N   TP  S +I
Sbjct: 189 VGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITP-LSPSI 247
Query: 299 LAGITRKSIIEIAS 312
           L  +T+ S++ +A 
Sbjct: 248 LPSVTKYSLLYLAE 261
>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373 Back     alignment and structure
>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372 Back     alignment and structure
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368 Back     alignment and structure
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358 Back     alignment and structure
>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365 Back     alignment and structure
>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365 Back     alignment and structure
>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386 Back     alignment and structure
>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366 Back     alignment and structure
>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309 Back     alignment and structure
>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308 Back     alignment and structure
>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328 Back     alignment and structure
>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query328
3dth_A372 Branched-chain amino acid aminotransferase; open t 1e-137
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 1e-131
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 1e-128
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 3e-33
1iye_A309 Branched-chain amino acid aminotransferase; hexame 3e-33
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 4e-32
3u0g_A328 Putative branched-chain amino acid aminotransfera; 8e-32
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 2e-31
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 2e-30
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 8e-29
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 1e-25
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 5e-24
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 4e-23
3qqm_A221 MLR3007 protein; structural genomics, joint center 3e-18
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 1e-09
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365 Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386 Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315 Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309 Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308 Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328 Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272 Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269 Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285 Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246 Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277 Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221 Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Length = 194 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query328
3dth_A372 Branched-chain amino acid aminotransferase; open t 100.0
3dtg_A372 Branched-chain amino acid aminotransferase; open t 100.0
3uzo_A358 Branched-chain-amino-acid aminotransferase; BCAT, 100.0
4dqn_A345 Putative branched-chain amino acid aminotransfera; 100.0
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 100.0
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 100.0
3u0g_A328 Putative branched-chain amino acid aminotransfera; 100.0
1iye_A309 Branched-chain amino acid aminotransferase; hexame 100.0
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 100.0
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 100.0
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 100.0
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 100.0
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 100.0
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 100.0
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 100.0
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 100.0
3qqm_A221 MLR3007 protein; structural genomics, joint center 100.0
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 100.0
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A* Back     alignment and structure
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A* Back     alignment and structure
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans} Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 328
d2a1ha1363 e.17.1.1 (A:3-365) Branched-chain aminoacid aminot 3e-54
d1iyea_304 e.17.1.1 (A:) Branched-chain aminoacid aminotransf 8e-30
d1daaa_277 e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill 9e-14
d1i2ka_269 e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric 1e-09
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  179 bits (454), Expect = 3e-54
 Identities = 81/260 (31%), Positives = 131/260 (50%), Gaps = 5/260 (1%)

Query: 61  MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
              + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++
Sbjct: 21  GPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFK 80

Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYI 180
            +D Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K WVP     SLY+
Sbjct: 81  GKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYV 140

Query: 181 RPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-EGLAPLNLYVEDEFHRATPGGAGGVK 239
           RP+L+G+ P LG++        V   PVG YF    + P++L  +  F RA  GG G  K
Sbjct: 141 RPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYK 200

Query: 240 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGN----IISTPATS 295
              NY P +     A  RG   VL+L   + +  E  +               + TP  +
Sbjct: 201 LGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLN 260

Query: 296 GTILAGITRKSIIEIASDCG 315
           G IL G+ R+S++++A   G
Sbjct: 261 GVILPGVVRQSLLDMAQTWG 280
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304 Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277 Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query328
d2a1ha1363 Branched-chain aminoacid aminotransferase {Human ( 100.0
d1iyea_304 Branched-chain aminoacid aminotransferase {Escheri 100.0
d1i2ka_269 Aminodeoxychorismate lyase {Escherichia coli [TaxI 100.0
d1daaa_277 D-aminoacid aminotransferase {Bacillus sp., strain 100.0
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=5.3e-65  Score=492.48  Aligned_cols=265  Identities=34%  Similarity=0.588  Sum_probs=247.9

Q ss_pred             CCCCCCCccccccCceEEEEeccceEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHHHH
Q 020264           61 MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQT  140 (328)
Q Consensus        61 ~~~~~l~fg~~~td~m~~~~~~~~~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~  140 (328)
                      .+.++|+||++|||||++++|++|+|.||+++|++++.|||+|++||||||||||||+|+++||++++|||++|++||++
T Consensus        21 ~~~~~~~f~~~~~d~m~~~~~~~~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~~~~g~i~lFrld~Hl~RL~~  100 (363)
T d2a1ha1          21 GPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLR  100 (363)
T ss_dssp             CTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHH
T ss_pred             CCcccCCCCCcccceEEEEEecCCeeeCCEEeEcccceeCcchhhccccceeeeeEEEEECCCCCEEEEccHHHHHHHHH
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCceEEEEEEEEecCCcccccCCCCcEEEEEEeecCccccCC-cccE
Q 020264          141 GAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEG-LAPL  219 (328)
Q Consensus       141 Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~i~~~P~~~y~~~G-~~~v  219 (328)
                      ||++++||.++.+++.++|.++++.|+.|+|....+++||||+++++++.+|+.|+..+.+++++.|.+.++..+ .++.
T Consensus       101 Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~  180 (363)
T d2a1ha1         101 SAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPV  180 (363)
T ss_dssp             HHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSCCCE
T ss_pred             HHHHhCCCCCChHHHHHHHHHHHHHHHhhccccccccEEEEEeeccCCccccccCCcccceeEEEeeccccCccccccce
Confidence            999999998899999999999999999999998888999999999988889999988888888888888777654 5677


Q ss_pred             EEEeeccceecCCCCCCCCcccCChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECC-----EEEcCCC
Q 020264          220 NLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGN-----IISTPAT  294 (328)
Q Consensus       220 ~l~v~~~~~R~~p~~~~~~Kt~~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~-----~liTP~l  294 (328)
                      .+.+.+.+.|.+|.+++.+|.++||+++++|..+|+++||||+||||. ++|+|+|++++|+|+++++     +++|||+
T Consensus       181 ~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~-~dg~v~E~~~sNiF~v~~~kdG~~~l~tppl  259 (363)
T d2a1ha1         181 SLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYG-PDHQLTEVGTMNIFVYWTHEDGVLELVTPPL  259 (363)
T ss_dssp             EEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEET-TTTEEEEETTEEEEEEEECTTSCEEEEECCC
T ss_pred             eEEEeeeccccCccccccccccccccchhhHHHHhhcCCceeeeeccc-ccceEEeccceEEEEEEecCCCcEEEEeccc
Confidence            888888899999999999999999999999999999999999999985 3799999999999999765     6999999


Q ss_pred             CCCCcchHHHHHHHHHHHHCC-CeEEEEeeecc
Q 020264          295 SGTILAGITRKSIIEIASDCG-FQVRYPLLFGT  326 (328)
Q Consensus       295 ~~~ILpGITR~svlela~~~G-~~VeEr~i~~~  326 (328)
                      +++|||||||++||++|+++| ++|+||+|+.+
T Consensus       260 ~~~ILpGITR~~Viela~~~g~i~V~Er~i~~~  292 (363)
T d2a1ha1         260 NGVILPGVVRQSLLDMAQTWGEFRVVERTITMK  292 (363)
T ss_dssp             SSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHH
T ss_pred             cccccCchHHHHHHHHHHHcCCCceeecCCCHH
Confidence            999999999999999999997 99999999864
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Back     information, alignment and structure