Citrus Sinensis ID: 020281

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
MMSYERYEVEDDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSVGGYYGGIIDYGPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHGRSSWFLESIGVHLKPLLIQNPPINLSSASQNYVSNEIPEKSRGFEMATTREKQDSIYQPEILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFSNNGIIAGLPARKGRFIDSIGPHFIEEKPPIPRPLNDSFNNMNGRKISQPFSDSFNTNENDRRTSQVFPGMVKEPAAWFSS
cccccccccccccEEEcEEcccccccccccccccEEEEEEEEccEEEEEEEEEEEcccEEEccccccccccccEEEEcccccccEEEEEEEEEEEEccccEEEEEEEEEEccccccccccccccEEEEcccccEEEEEEEEccccccEEEEEEEcccccccccccccccccEEcccccccccccccccccEEEccccccEEEEEEEccccccEEcccEEEEEEEEEEEEcccEEccccccccEEEEEccccEEEEEEEEccccEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEcccccccc
cccccccccccccEEEEEEEccccEEEEcccccEEEEEEEEEcccEEEEEEEEEEccEEEEcccEccccccEEEEEEcccccccEEEEEccEEccccccEEEEEEEEEEEcccEEEEEEccccEEEEEEEEEcEEEEEEEEEcccEEEEEEEEccccccccccEEEEEcccEEEEEEEEEcccccEEEccccccccccEEEEEEcccccEEEEEEEccccEEEEEEEEEccccccccccccccEEEEccccEEEEEEccccHHHHEEEEEEEcccccccccccHcccccccccccccccccEEEEEEEcccccEEEEEEEcccEEccc
mmsyeryeveddhvtvgpwggqngarwddgvFSSVRQVVISYGAGIDSILIEYdkkgssvwsdkhggrggfktnkvkfnypeefLVSVGGyyggiidygPVLVRSLVFesnkrkygpfglqqgthfslpmaggmiagfhgrSSWFLESIgvhlkplliqnppinlssasqnyvsneipeksrgfemattrekqdsiyqpeilihksgysgsailrgTTTTVVKSVTFLtnrrmhgpsgagdeqgiffsnngiiaglparkgrfidsigphfieekppiprplndsfnnmngrkisqpfsdsfntnendrrtsqvfpgmvkepaawfss
mmsyeryeveddhvtvgpwggqngarwDDGVFSSVRQVVISYGAGIDSILIEYDKKgssvwsdkhggrggfktnkvkfnYPEEFLVSVGGYYGGIIDYGPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHGRSSWFLESIGVHLKPLLIQNPPINLSSASQNYVSNEIPEKSRGFEMATTRekqdsiyqpeILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFSNNGIIAGLPARKGRFIDSIGPHfieekppiprPLNDSFNNMNGRKISqpfsdsfntnendrrtsqvfpgmvkepaawfss
MMSYERYEVEDDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSVggyyggiidygPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHGRSSWFLESIGVHLKPLLIQNPPINLSSASQNYVSNEIPEKSRGFEMATTREKQDSIYQPEILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFSNNGIIAGLPARKGRFIDSIGPHFIEEKPPIPRPLNDSFNNMNGRKISQPFSDSFNTNENDRRTSQVFPGMVKEPAAWFSS
**********DDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSVGGYYGGIIDYGPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHGRSSWFLESIGVHLKPLLIQNPPI********************************IYQPEILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMH******DEQGIFFSNNGIIAGLPARKGRFIDSIGPHFI********************************************************
*****************PWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSVGGYYGGIIDYGPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHGRSSWFLESIGVHLKPLLIQNPPINLSSASQNYVSNEIPEKSRGFEMATTREKQDSIYQPEILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFSNNGIIAGLPARKGRFIDSIGPHFIEE****************************NTNENDRRTSQVFPGMVKEPAAWFS*
**********DDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSVGGYYGGIIDYGPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHGRSSWFLESIGVHLKPLLIQNPPINLSSASQNYVSNEIPEKSRGFEMATTREKQDSIYQPEILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFSNNGIIAGLPARKGRFIDSIGPHFIEEKPPIPRPLNDSFNNMNGRKISQPFSDSFNTNENDRRTSQVFPGMVKEPAAWFSS
*MSYERYEVEDDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSVGGYYGGIIDYGPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHGRSSWFLESIGVHLKPLLIQNPPINLSSASQNYVSNEIPEKSRGFEMATTREKQDSIYQPEILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFSNNGIIAGLPARKGRFIDSIGPHFIEEKPPIPRP*********GRKISQPFSDSFNTNENDRRTSQVFPGMVKEPAAWFSS
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMSYERYEVEDDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSVGGYYGGIIDYGPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHGRSSWFLESIGVHLKPLLIQNPPINLSSASQNYVSNEIPEKSRGFEMATTREKQDSIYQPEILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFSNNGIIAGLPARKGRFIDSIGPHFIEEKPPIPRPLNDSFNNMNGRKISQPFSDSFNTNENDRRTSQVFPGMVKEPAAWFSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query328 2.2.26 [Sep-21-2011]
Q9SAV0462 Myrosinase-binding protei no no 0.420 0.298 0.388 2e-23
Q9SAV1642 Myrosinase-binding protei no no 0.420 0.214 0.395 3e-23
P82859309 Agglutinin OS=Castanea cr N/A no 0.393 0.417 0.401 2e-19
O04312300 Myrosinase-binding protei no no 0.417 0.456 0.355 1e-18
P83304447 Mannose/glucose-specific N/A no 0.737 0.541 0.315 9e-18
P18670133 Agglutinin alpha chain OS N/A no 0.390 0.962 0.360 3e-17
O80998449 Myrosinase-binding protei no no 0.417 0.305 0.347 3e-17
P18674133 Agglutinin alpha chain OS N/A no 0.390 0.962 0.345 4e-17
O80950458 Myrosinase-binding protei no no 0.414 0.296 0.355 6e-16
O80948459 Myrosinase-binding protei no no 0.414 0.296 0.362 6e-16
>sp|Q9SAV0|MB12_ARATH Myrosinase-binding protein-like At1g52040 OS=Arabidopsis thaliana GN=At1g52040 PE=2 SV=1 Back     alignment and function desciption
 Score =  110 bits (274), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 1/139 (0%)

Query: 20  GGQNGARWDDGVFSSVRQVVISYG-AGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKF 78
           GG  GA WDDGVF  VR++++  G  G+  +  EY+K   ++  D HG +    T   + 
Sbjct: 317 GGNGGASWDDGVFDGVRKILVGQGNDGVAFVTFEYNKGSQAILGDGHGKKTLLGTETFEL 376

Query: 79  NYPEEFLVSVGGYYGGIIDYGPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGF 138
           +YP E++ SV GYY  I      +V SL+F++NKR   PFG+  G HF L   G  + GF
Sbjct: 377 DYPSEYITSVEGYYDKIFGVEAEVVTSLMFKTNKRTSQPFGMTAGEHFELKEDGYKVVGF 436

Query: 139 HGRSSWFLESIGVHLKPLL 157
           HG++   +  IGVH+ P+ 
Sbjct: 437 HGKAGDLVHQIGVHIVPIF 455

Arabidopsis thaliana (taxid: 3702)
>sp|Q9SAV1|MB11_ARATH Myrosinase-binding protein-like At1g52030 OS=Arabidopsis thaliana GN=F-ATMBP PE=2 SV=1 Back     alignment and function description
>sp|P82859|LECA_CASCR Agglutinin OS=Castanea crenata PE=1 SV=1 Back     alignment and function description
>sp|O04312|MB32_ARATH Myrosinase-binding protein-like At3g16440 OS=Arabidopsis thaliana GN=At3g16440 PE=2 SV=1 Back     alignment and function description
>sp|P83304|LEC_PARPC Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala PE=1 SV=1 Back     alignment and function description
>sp|P18670|LECA_ARTIN Agglutinin alpha chain OS=Artocarpus integer PE=1 SV=2 Back     alignment and function description
>sp|O80998|MB21_ARATH Myrosinase-binding protein-like At2g25980 OS=Arabidopsis thaliana GN=At2g25980 PE=2 SV=1 Back     alignment and function description
>sp|P18674|LECA_MACPO Agglutinin alpha chain OS=Maclura pomifera PE=1 SV=2 Back     alignment and function description
>sp|O80950|MB22_ARATH Myrosinase-binding protein-like At2g39310 OS=Arabidopsis thaliana GN=At2g39310 PE=2 SV=1 Back     alignment and function description
>sp|O80948|MB23_ARATH Myrosinase-binding protein-like At2g39330 OS=Arabidopsis thaliana GN=At2g39330 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query328
255538778 540 hypothetical protein RCOM_1595950 [Ricin 0.597 0.362 0.567 3e-59
359492699 1545 PREDICTED: pentatricopeptide repeat-cont 0.496 0.105 0.624 2e-56
302142562 670 unnamed protein product [Vitis vinifera] 0.554 0.271 0.561 1e-55
224085738150 predicted protein [Populus trichocarpa] 0.454 0.993 0.688 5e-55
255538774 1218 pentatricopeptide repeat-containing prot 0.503 0.135 0.596 3e-54
356541741 594 PREDICTED: myrosinase-binding protein-li 0.503 0.277 0.614 6e-53
357490819 604 Myrosinase-binding protein-like protein 0.487 0.264 0.604 2e-51
356569525 604 PREDICTED: agglutinin-like [Glycine max] 0.503 0.273 0.596 8e-51
449470126 1463 PREDICTED: pentatricopeptide repeat-cont 0.484 0.108 0.542 4e-47
449523327 1090 PREDICTED: pentatricopeptide repeat-cont 0.435 0.131 0.567 8e-47
>gi|255538778|ref|XP_002510454.1| hypothetical protein RCOM_1595950 [Ricinus communis] gi|223551155|gb|EEF52641.1| hypothetical protein RCOM_1595950 [Ricinus communis] Back     alignment and taxonomy information
 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 114/201 (56%), Positives = 151/201 (75%), Gaps = 5/201 (2%)

Query: 1   MMSYERYEVEDDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSV 60
           M SY  YE  +++++VGPWGGQNG RWDDG+ +SVRQV+I +GA +DSI  EYDKKG+SV
Sbjct: 4   MQSYGGYE--NNYISVGPWGGQNGVRWDDGISNSVRQVIICHGAAVDSIQFEYDKKGTSV 61

Query: 61  WSDKHGGRGGFKTNKVKFNYPEEFLVSVGGYYGGIID-YGPVLVRSLVFESNKRKYGPFG 119
           WS+KHGG G  K NKVKF+YP+E+LVSV G+YG +++ YGPVLVRSL+F++N+RKYGPFG
Sbjct: 62  WSEKHGGTGCIKINKVKFDYPDEYLVSVSGHYGSVVEYYGPVLVRSLMFQTNRRKYGPFG 121

Query: 120 LQQGTHFSLPMAGGMIAGFHGRSSWFLESIGVHLKPLLIQNPPINLSSASQNYVSNEIPE 179
           +QQGT FS P+ GG + GFHGRSSW+L+SIGV+LKP L Q    N     QNY +    +
Sbjct: 122 IQQGTQFSFPLTGGQVVGFHGRSSWYLDSIGVYLKPFL-QRITSNDLPVQQNYATTRNND 180

Query: 180 KSRGF-EMATTREKQDSIYQP 199
           K R + +    +  Q ++ +P
Sbjct: 181 KRRDYSDSDVEKNYQVAVAKP 201

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302142562|emb|CBI19765.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224085738|ref|XP_002307685.1| predicted protein [Populus trichocarpa] gi|222857134|gb|EEE94681.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255538774|ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223551153|gb|EEF52639.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356541741|ref|XP_003539332.1| PREDICTED: myrosinase-binding protein-like At1g52040-like [Glycine max] Back     alignment and taxonomy information
>gi|357490819|ref|XP_003615697.1| Myrosinase-binding protein-like protein [Medicago truncatula] gi|355517032|gb|AES98655.1| Myrosinase-binding protein-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356569525|ref|XP_003552950.1| PREDICTED: agglutinin-like [Glycine max] Back     alignment and taxonomy information
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like, partial [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query328
TAIR|locus:2032622176 AT1G73040 "AT1G73040" [Arabido 0.426 0.795 0.478 8.3e-35
TAIR|locus:2034026462 MBP1 "myrosinase-binding prote 0.417 0.296 0.362 6.8e-22
TAIR|locus:2034081642 MBP2 "myrosinase-binding prote 0.417 0.213 0.369 2.3e-21
UNIPROTKB|P83304447 P83304 "Mannose/glucose-specif 0.442 0.324 0.331 3.5e-17
TAIR|locus:2088369300 JAL33 "AT3G16450" [Arabidopsis 0.417 0.456 0.333 5.7e-20
TAIR|locus:2088364300 MLP-300B "AT3G16440" [Arabidop 0.417 0.456 0.333 6.5e-19
TAIR|locus:2088354296 JAL31 "jacalin-related lectin 0.417 0.462 0.326 1.4e-18
TAIR|locus:2088344298 PBP1 "PYK10-binding protein 1" 0.420 0.463 0.330 2.2e-18
UNIPROTKB|P18670133 P18670 "Agglutinin alpha chain 0.390 0.962 0.330 2e-17
TAIR|locus:2162828444 AT5G35940 "AT5G35940" [Arabido 0.417 0.308 0.359 3.4e-17
TAIR|locus:2032622 AT1G73040 "AT1G73040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 67/140 (47%), Positives = 91/140 (65%)

Query:    14 VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKT 73
             V VGPWGG  G  WDDG++  VR++ + Y   IDSI + YDK G    S+KHGG GG KT
Sbjct:    13 VFVGPWGGNGGTTWDDGIYDGVREIRLVYDHCIDSISVIYDKNGKPAKSEKHGGVGGNKT 72

Query:    74 NKVKFNYPEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGG 133
             +++K  YPEE+L  V             ++RS+ F+SNK+ YGP+G++QGT F+  + GG
Sbjct:    73 SEIKLQYPEEYLTGVSGYYCPMVNSGTPVIRSMTFKSNKQVYGPYGVEQGTPFTFSVNGG 132

Query:   134 MIAGFHGRSSWFLESIGVHL 153
              I G +GRS W+L+SIG HL
Sbjct:   133 RIVGMNGRSGWYLDSIGFHL 152
GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0015996 "chlorophyll catabolic process" evidence=RCA
TAIR|locus:2034026 MBP1 "myrosinase-binding protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034081 MBP2 "myrosinase-binding protein 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P83304 P83304 "Mannose/glucose-specific lectin" [Parkia platycephala (taxid:185447)] Back     alignment and assigned GO terms
TAIR|locus:2088369 JAL33 "AT3G16450" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088364 MLP-300B "AT3G16440" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088354 JAL31 "jacalin-related lectin 31" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088344 PBP1 "PYK10-binding protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P18670 P18670 "Agglutinin alpha chain" [Artocarpus integer (taxid:3490)] Back     alignment and assigned GO terms
TAIR|locus:2162828 AT5G35940 "AT5G35940" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00014540001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (588 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query328
cd09612130 cd09612, Jacalin, Jacalin-like plant lectin domain 2e-45
pfam01419132 pfam01419, Jacalin, Jacalin-like lectin domain 7e-41
smart00915128 smart00915, Jacalin, Jacalin-like lectin domain 7e-31
PLN02193 470 PLN02193, PLN02193, nitrile-specifier protein 6e-13
cd09302128 cd09302, Jacalin_like, Jacalin-like lectin domain 5e-10
cd09612130 cd09612, Jacalin, Jacalin-like plant lectin domain 1e-05
cd09611128 cd09611, Jacalin_ZG16_like, Jacalin-like lectin do 2e-05
cd09614128 cd09614, griffithsin_like, Jacalin-like lectin dom 4e-05
>gnl|CDD|187708 cd09612, Jacalin, Jacalin-like plant lectin domain Back     alignment and domain information 
 Score =  150 bits (381), Expect = 2e-45
 Identities = 64/133 (48%), Positives = 88/133 (66%), Gaps = 5/133 (3%)

Query: 24  GARWDDGVFSS-VRQVVISYGA-GIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYP 81
           G+ WDDGVF   +R++ +  G  GIDSI  EYDK G  V    HGG GG    ++  +YP
Sbjct: 1   GSAWDDGVFPDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGG-TPEEIVLDYP 59

Query: 82  EEFLVSVGGYYGGIIDYGPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHGR 141
           +E++ SV G YG +   G  ++ SL F++NKR YGPFG++ GT FSLP+ GG I GFHGR
Sbjct: 60  DEYITSVSGTYGPV--SGSNVITSLTFKTNKRTYGPFGVESGTPFSLPVEGGKIVGFHGR 117

Query: 142 SSWFLESIGVHLK 154
           S  +L++IGV++ 
Sbjct: 118 SGDYLDAIGVYVS 130

Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states. Length = 130
>gnl|CDD|216489 pfam01419, Jacalin, Jacalin-like lectin domain Back     alignment and domain information
>gnl|CDD|214909 smart00915, Jacalin, Jacalin-like lectin domain Back     alignment and domain information
>gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein Back     alignment and domain information
>gnl|CDD|187706 cd09302, Jacalin_like, Jacalin-like lectin domain Back     alignment and domain information
>gnl|CDD|187708 cd09612, Jacalin, Jacalin-like plant lectin domain Back     alignment and domain information
>gnl|CDD|187707 cd09611, Jacalin_ZG16_like, Jacalin-like lectin domain of the zymogen granule protein 16 and related proteins Back     alignment and domain information
>gnl|CDD|187710 cd09614, griffithsin_like, Jacalin-like lectin domain of griffithsin and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 328
PF01419130 Jacalin: Jacalin-like lectin domain; InterPro: IPR 99.96
PLN02193 470 nitrile-specifier protein 99.95
PF01419130 Jacalin: Jacalin-like lectin domain; InterPro: IPR 99.86
PLN02193 470 nitrile-specifier protein 99.78
KOG4525614 consensus Jacalin-like lectin domain-containing pr 98.39
KOG4525614 consensus Jacalin-like lectin domain-containing pr 98.05
>PF01419 Jacalin: Jacalin-like lectin domain; InterPro: IPR001229 This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry Back     alignment and domain information 
Probab=99.96  E-value=2.6e-28  Score=206.08  Aligned_cols=128  Identities=47%  Similarity=0.940  Sum_probs=114.6

Q ss_pred             CCccccCCCCcEEEEEEEEC-CeeeEEEEEEecCCceeeecccCCCCCCeeeEEEccCCCceEEEEEEEEeceecCCCeE
Q 020281           24 GARWDDGVFSSVRQVVISYG-AGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSVGGYYGGIIDYGPVL  102 (328)
Q Consensus        24 G~~fddg~~~~I~~I~I~~g-~~IdsIqf~Y~~~G~~~~~~~hGg~gG~~~~~~~Ld~p~EyIt~VsG~~g~~~~~g~~~  102 (328)
                      |+.|||+.+++|++|.|+++ +.|++|||.|++.+..+++..||..++....+|.|++|+||||+|+|+++.    +..+
T Consensus         1 g~~~d~g~~~~v~~i~v~~~~~~I~~Iq~~Y~~~~g~~~~~~~G~~~g~~~~~~~l~~~~E~It~isG~~~~----~~~~   76 (130)
T PF01419_consen    1 GDSWDDGGHDGVKKIVVIYGGDGIDGIQFTYDDGGGQVWGQQHGGNGGGSTKEFELDDPDEYITSISGTYGK----GHDY   76 (130)
T ss_dssp             SEEEEEECSSEEEEEEEEEESSSEEEEEEEEEETTEEEEEEEEECSSSTEEEEEEEETTTS-EEEEEEEEEE----TEEE
T ss_pred             CCcccCCCCCCCEEEEEEECCCEEEEEEEEEECCCceEEeeccCcccccCccceEECCCccEEEEEEEEEEc----CccE
Confidence            68899999999999999876 899999999976666688999999987567899999789999999999986    2458


Q ss_pred             EEEEEEEECCCccccCCCCCCceEEecC-CCCeEEEEEEEeCCcEeEEEEEEec
Q 020281          103 VRSLVFESNKRKYGPFGLQQGTHFSLPM-AGGMIAGFHGRSSWFLESIGVHLKP  155 (328)
Q Consensus       103 I~sLtF~Tnk~~~gpfG~~~G~~Fs~~~-~g~~IvGF~Grsg~~ldsIG~~~~~  155 (328)
                      |++|+|+||++++.|+|+..|++|+++. .+++|+||+||++++||+|||||.|
T Consensus        77 I~sL~F~Tnkg~~~~~gg~~g~~F~~~~~~~~~ivGF~G~~g~~ld~iG~y~~p  130 (130)
T PF01419_consen   77 ITSLTFTTNKGRYSPFGGSGGTKFSLPVPEGGQIVGFFGRSGDYLDSIGVYFTP  130 (130)
T ss_dssp             EEEEEEEESSSEEEEEECSCSEEEEEEESESEEEEEEEEEESSSEEEEEEEEEE
T ss_pred             EEEEEEEecCCcccCcccccCCEEEEeecCCCEEEEEEEEcCCeEEEEEEEEeC
Confidence            9999999999999988889999999987 5789999999999999999999986

Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein. Proteins containing this domain include: Jacalin, a tetrameric plant seed lectin and agglutinin from Artocarpus heterophyllus (jackfruit), which is specific for galactose []. Artocarpin, a tetrameric plant seed lectin from A. heterophyllus []. Lectin MPA, a tetrameric plant seed lectin and agglutinin from Maclura pomifera (Osage orange), []. Heltuba lectin, a plant seed lectin and agglutinin from Helianthus tuberosus (Jerusalem artichoke) []. Agglutinin from Calystegia sepium (Hedge bindweed) []. Griffithsin, an anti-viral lectin from red algae (Griffithsia species) []. ; PDB: 2GUE_B 2HYR_A 2GTY_B 2HYQ_B 3LKY_A 2GUC_B 2GUD_A 2NUO_B 2NU5_B 3LL2_A ....
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PF01419 Jacalin: Jacalin-like lectin domain; InterPro: IPR001229 This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>KOG4525 consensus Jacalin-like lectin domain-containing protein [General function prediction only] Back     alignment and domain information
>KOG4525 consensus Jacalin-like lectin domain-containing protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query328
1xxq_A161 Structure Of A Mannose-Specific Jacalin-Related Lec 6e-25
1xxq_A161 Structure Of A Mannose-Specific Jacalin-Related Lec 6e-07
1j4s_A149 Structure Of Artocarpin: A Lectin With Mannose Spec 2e-20
1j4s_A149 Structure Of Artocarpin: A Lectin With Mannose Spec 3e-07
1j4t_A149 Structure Of Artocarpin: A Lectin With Mannose Spec 2e-20
1j4t_A149 Structure Of Artocarpin: A Lectin With Mannose Spec 3e-07
4akd_A150 High Resolution Structure Of Mannose Binding Lectin 1e-19
4akd_A150 High Resolution Structure Of Mannose Binding Lectin 5e-08
3p8s_A157 Crystal Structure Of Single Chain Recombinant Jacal 5e-19
2jz4_A299 Putative 32 Kda Myrosinase Binding Protein At3g1645 1e-18
1vbp_A149 Crystal Structure Of Artocarpin-Mannopentose Comple 4e-18
1vbp_A149 Crystal Structure Of Artocarpin-Mannopentose Comple 4e-07
1vbo_A149 Crystal Structure Of Artocarpin-Mannotriose Complex 2e-17
1vbo_A149 Crystal Structure Of Artocarpin-Mannotriose Complex 4e-07
1zgr_A447 Crystal Structure Of The Parkia Platycephala Seed L 8e-17
4ak4_A133 High Resolution Structure Of Galactose Binding Lect 2e-16
4akb_A133 Structure Of Galactose Binding Lectin From Champeda 6e-16
1jac_A133 A Novel Mode Of Carbohydrate Recognition In Jacalin 2e-15
1jot_A133 Structure Of The Lectin Mpa Complexed With T-Antige 3e-15
1toq_A133 Crystal Structure Of A Galactose Specific Lectin Fr 3e-15
1ugw_A133 Crystal Structure Of Jacalin- Gal Complex Length = 3e-15
2bmy_A141 Banana Lectin Length = 141 1e-13
1x1v_A141 Structure Of Banana Lectin- Methyl-Alpha-Mannose Co 3e-13
1c3k_A147 Crystal Structure Of Helianthus Tuberosus Lectin Le 1e-11
1ouw_A152 Crystal Structure Of Calystegia Sepium Agglutinin L 3e-07
3r50_A160 Structure Analysis Of A Wound-Inducible Lectin Ipom 7e-07
>pdb|1XXQ|A Chain A, Structure Of A Mannose-Specific Jacalin-Related Lectin From Morus Nigra Length = 161 Back     alignment and structure 
Iteration: 1

 Score =  111 bits (277), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
Query: 14  VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKH-GGRGGFK 72
           + VG WGG  G  WDDG ++ +R++ +S+G  I +  + YD  G       H G    FK
Sbjct: 17  IEVGLWGGPGGNAWDDGSYTGIREINLSHGDAIGAFSVIYDLNGQPFTGPTHPGNEPSFK 76
Query: 73  TNKVKFNYPEEFLVSVX--XXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPM 130
           T K+  ++P EFLVSV               ++RSL F++NK+ YGP+G ++GT FSLP+
Sbjct: 77  TVKITLDFPNEFLVSVSGYTGVLARLATGKDVIRSLTFKTNKKTYGPYGKEEGTPFSLPI 136
Query: 131 AGGMIAGFHGRSSWFLESIGVHL 153
             G+I GF GRS + +++IG HL
Sbjct: 137 ENGLIVGFKGRSGFVVDAIGFHL 159
>pdb|1XXQ|A Chain A, Structure Of A Mannose-Specific Jacalin-Related Lectin From Morus Nigra Length = 161 Back     alignment and structure
>pdb|1J4S|A Chain A, Structure Of Artocarpin: A Lectin With Mannose Specificity (Form 1) Length = 149 Back     alignment and structure
>pdb|1J4S|A Chain A, Structure Of Artocarpin: A Lectin With Mannose Specificity (Form 1) Length = 149 Back     alignment and structure
>pdb|1J4T|A Chain A, Structure Of Artocarpin: A Lectin With Mannose Specificity (Form 2) Length = 149 Back     alignment and structure
>pdb|1J4T|A Chain A, Structure Of Artocarpin: A Lectin With Mannose Specificity (Form 2) Length = 149 Back     alignment and structure
>pdb|4AKD|A Chain A, High Resolution Structure Of Mannose Binding Lectin From Champedak (cmb) Length = 150 Back     alignment and structure
>pdb|4AKD|A Chain A, High Resolution Structure Of Mannose Binding Lectin From Champedak (cmb) Length = 150 Back     alignment and structure
>pdb|3P8S|A Chain A, Crystal Structure Of Single Chain Recombinant Jacalin Showing Highly Dynamic Posttranslational Excission Loop That Reduces Binding Affinity Length = 157 Back     alignment and structure
>pdb|2JZ4|A Chain A, Putative 32 Kda Myrosinase Binding Protein At3g16450.1 From Arabidopsis Thaliana Length = 299 Back     alignment and structure
>pdb|1VBP|A Chain A, Crystal Structure Of Artocarpin-Mannopentose Complex Length = 149 Back     alignment and structure
>pdb|1VBP|A Chain A, Crystal Structure Of Artocarpin-Mannopentose Complex Length = 149 Back     alignment and structure
>pdb|1VBO|A Chain A, Crystal Structure Of Artocarpin-Mannotriose Complex Length = 149 Back     alignment and structure
>pdb|1VBO|A Chain A, Crystal Structure Of Artocarpin-Mannotriose Complex Length = 149 Back     alignment and structure
>pdb|1ZGR|A Chain A, Crystal Structure Of The Parkia Platycephala Seed Lectin Length = 447 Back     alignment and structure
>pdb|4AK4|A Chain A, High Resolution Structure Of Galactose Binding Lectin From Champedak (cgb) Length = 133 Back     alignment and structure
>pdb|4AKB|A Chain A, Structure Of Galactose Binding Lectin From Champedak (cgb) With Galactose Length = 133 Back     alignment and structure
>pdb|1JAC|A Chain A, A Novel Mode Of Carbohydrate Recognition In Jacalin, A Moraceae Plant Lectin With A Beta-Prism Length = 133 Back     alignment and structure
>pdb|1JOT|A Chain A, Structure Of The Lectin Mpa Complexed With T-Antigen Disaccharide Length = 133 Back     alignment and structure
>pdb|1TOQ|A Chain A, Crystal Structure Of A Galactose Specific Lectin From Artocarpus Hirsuta In Complex With Methyl-a-d-galactose Length = 133 Back     alignment and structure
>pdb|1UGW|A Chain A, Crystal Structure Of Jacalin- Gal Complex Length = 133 Back     alignment and structure
>pdb|2BMY|A Chain A, Banana Lectin Length = 141 Back     alignment and structure
>pdb|1X1V|A Chain A, Structure Of Banana Lectin- Methyl-Alpha-Mannose Complex Length = 141 Back     alignment and structure
>pdb|1C3K|A Chain A, Crystal Structure Of Helianthus Tuberosus Lectin Length = 147 Back     alignment and structure
>pdb|1OUW|A Chain A, Crystal Structure Of Calystegia Sepium Agglutinin Length = 152 Back     alignment and structure
>pdb|3R50|A Chain A, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin From Sweet Potato Length = 160 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query328
1xxq_A161 Mannose-binding lectin; tetrameric B-prism fold, j 1e-49
1xxq_A161 Mannose-binding lectin; tetrameric B-prism fold, j 2e-07
3llz_A133 MPA, agglutinin alpha chain; maclura pomifera aggl 6e-46
3llz_A133 MPA, agglutinin alpha chain; maclura pomifera aggl 1e-05
3p8s_A157 Jacalin; hemeagglutinin, sugars, sugar binding P; 1e-45
3p8s_A157 Jacalin; hemeagglutinin, sugars, sugar binding P; 5e-05
2jz4_A299 Jasmonate inducible protein isolog; myrosinase bin 4e-45
2jz4_A299 Jasmonate inducible protein isolog; myrosinase bin 6e-45
1zgr_A 447 Mannose/glucose-specific lectin; beta-prism, sugar 6e-42
1zgr_A447 Mannose/glucose-specific lectin; beta-prism, sugar 2e-40
1zgr_A447 Mannose/glucose-specific lectin; beta-prism, sugar 4e-38
1c3k_A147 Agglutinin; beta prism, jacalin-related, mannose, 3e-41
1c3k_A147 Agglutinin; beta prism, jacalin-related, mannose, 4e-08
1ouw_A152 Lectin, agglutinin; beta-prism fold, mannose-bindi 4e-41
1ouw_A152 Lectin, agglutinin; beta-prism fold, mannose-bindi 5e-05
4ddn_A160 Ipomoelin; beta prism, carbohydrate binding protei 2e-40
4ddn_A160 Ipomoelin; beta prism, carbohydrate binding protei 3e-08
3mit_A141 Lectin; all beta sheet protein, beta prism-I fold, 9e-38
3apa_A141 Zymogen granule membrane protein 16; beta-prism fo 1e-27
3aqg_A158 ZG16B/PAUF, zymogen granule protein 16 homolog B; 2e-22
2gud_A122 Griffithsin, GRFT; lectins, domain swapping, manno 7e-22
2gux_A138 Griffithsin, GRFT; lectins, domain swapping, manno 1e-21
>1xxq_A Mannose-binding lectin; tetrameric B-prism fold, jacalin-fold, sugar binding protein; 1.80A {Morus nigra} PDB: 1xxr_A* 1j4t_A 1j4s_A 1j4u_A* 1vbp_A* 1vbo_A* Length = 161 Back     alignment and structure
 Score =  162 bits (411), Expect = 1e-49
 Identities = 61/141 (43%), Positives = 88/141 (62%), Gaps = 3/141 (2%)

Query: 16  VGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGR-GGFKTN 74
           VG WGG  G  WDDG ++ +R++ +S+G  I +  + YD  G       H G    FKT 
Sbjct: 19  VGLWGGPGGNAWDDGSYTGIREINLSHGDAIGAFSVIYDLNGQPFTGPTHPGNEPSFKTV 78

Query: 75  KVKFNYPEEFLVSVGGYYG--GIIDYGPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAG 132
           K+  ++P EFLVSV GY G    +  G  ++RSL F++NK+ YGP+G ++GT FSLP+  
Sbjct: 79  KITLDFPNEFLVSVSGYTGVLARLATGKDVIRSLTFKTNKKTYGPYGKEEGTPFSLPIEN 138

Query: 133 GMIAGFHGRSSWFLESIGVHL 153
           G+I GF GRS + +++IG HL
Sbjct: 139 GLIVGFKGRSGFVVDAIGFHL 159
>1xxq_A Mannose-binding lectin; tetrameric B-prism fold, jacalin-fold, sugar binding protein; 1.80A {Morus nigra} PDB: 1xxr_A* 1j4t_A 1j4s_A 1j4u_A* 1vbp_A* 1vbo_A* Length = 161 Back     alignment and structure
>3llz_A MPA, agglutinin alpha chain; maclura pomifera agglutinin, MPA complex, GAL-beta-1, 3 lectin, sugar binding protein; HET: GAL NGA; 1.55A {Maclura pomifera} PDB: 3lly_A 1jot_A* 3lm1_A* 1m26_A* 1jac_A 1kuj_A* 1ku8_A* 1pxd_A* 1ugw_C* 1ugy_C* 1uh0_A* 1uh1_A* 1ws4_C* 1ws5_C* 1ugx_A* 1ugw_A* 1ugy_A* 1ws4_A* 1ws5_A* 1toq_A* ... Length = 133 Back     alignment and structure
>3llz_A MPA, agglutinin alpha chain; maclura pomifera agglutinin, MPA complex, GAL-beta-1, 3 lectin, sugar binding protein; HET: GAL NGA; 1.55A {Maclura pomifera} PDB: 3lly_A 1jot_A* 3lm1_A* 1m26_A* 1jac_A 1kuj_A* 1ku8_A* 1pxd_A* 1ugw_C* 1ugy_C* 1uh0_A* 1uh1_A* 1ws4_C* 1ws5_C* 1ugx_A* 1ugw_A* 1ugy_A* 1ws4_A* 1ws5_A* 1toq_A* ... Length = 133 Back     alignment and structure
>3p8s_A Jacalin; hemeagglutinin, sugars, sugar binding P; 2.00A {Artocarpus heterophyllus} Length = 157 Back     alignment and structure
>3p8s_A Jacalin; hemeagglutinin, sugars, sugar binding P; 2.00A {Artocarpus heterophyllus} Length = 157 Back     alignment and structure
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana} Length = 299 Back     alignment and structure
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana} Length = 299 Back     alignment and structure
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Length = 447 Back     alignment and structure
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Length = 447 Back     alignment and structure
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Length = 447 Back     alignment and structure
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A* Length = 147 Back     alignment and structure
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A* Length = 147 Back     alignment and structure
>1ouw_A Lectin, agglutinin; beta-prism fold, mannose-binding, jacali related, sugar binding protein; 1.37A {Calystegia sepium} SCOP: b.77.3.1 Length = 152 Back     alignment and structure
>1ouw_A Lectin, agglutinin; beta-prism fold, mannose-binding, jacali related, sugar binding protein; 1.37A {Calystegia sepium} SCOP: b.77.3.1 Length = 152 Back     alignment and structure
>4ddn_A Ipomoelin; beta prism, carbohydrate binding protein, carbohydrate/sugar sugar binding protein; HET: AMG; 1.90A {Ipomoea batatas} PDB: 3r50_A* 3r52_A* 3r51_A* Length = 160 Back     alignment and structure
>4ddn_A Ipomoelin; beta prism, carbohydrate binding protein, carbohydrate/sugar sugar binding protein; HET: AMG; 1.90A {Ipomoea batatas} PDB: 3r50_A* 3r52_A* 3r51_A* Length = 160 Back     alignment and structure
>3mit_A Lectin; all beta sheet protein, beta prism-I fold, mannose specific, binding protein; HET: MAN; 2.32A {Musa acuminata} PDB: 1x1v_A* 3miu_A* 3miv_A 2bmz_A* 2bmy_A* 2bn0_A* Length = 141 Back     alignment and structure
>3apa_A Zymogen granule membrane protein 16; beta-prism fold, sugar binding protein; 1.65A {Homo sapiens} Length = 141 Back     alignment and structure
>3aqg_A ZG16B/PAUF, zymogen granule protein 16 homolog B; beta-prism fold, unknown function; 2.75A {Homo sapiens} Length = 158 Back     alignment and structure
>2gud_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, SARS, sugar binding protein; HET: MAN BMA; 0.94A {Griffithsia} SCOP: b.77.3.1 PDB: 2guc_A* 2gty_A* 2gue_A* 2hyq_A* 2hyr_A* 2nu5_A* 2nuo_A* 3lky_A 3ll0_A 3ll2_A* 3ll1_A Length = 122 Back     alignment and structure
>2gux_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, sugar binding protein; 2.00A {Griffithsia} SCOP: b.77.3.1 Length = 138 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query328
2jz4_A299 Jasmonate inducible protein isolog; myrosinase bin 100.0
1zgr_A447 Mannose/glucose-specific lectin; beta-prism, sugar 100.0
1zgr_A447 Mannose/glucose-specific lectin; beta-prism, sugar 100.0
1xxq_A161 Mannose-binding lectin; tetrameric B-prism fold, j 100.0
3p8s_A157 Jacalin; hemeagglutinin, sugars, sugar binding P; 100.0
1c3k_A147 Agglutinin; beta prism, jacalin-related, mannose, 100.0
1ouw_A152 Lectin, agglutinin; beta-prism fold, mannose-bindi 100.0
3llz_A133 MPA, agglutinin alpha chain; maclura pomifera aggl 100.0
3mit_A141 Lectin; all beta sheet protein, beta prism-I fold, 100.0
4ddn_A160 Ipomoelin; beta prism, carbohydrate binding protei 100.0
2jz4_A299 Jasmonate inducible protein isolog; myrosinase bin 100.0
3apa_A141 Zymogen granule membrane protein 16; beta-prism fo 99.97
3aqg_A158 ZG16B/PAUF, zymogen granule protein 16 homolog B; 99.96
2gud_A122 Griffithsin, GRFT; lectins, domain swapping, manno 99.96
2gux_A138 Griffithsin, GRFT; lectins, domain swapping, manno 99.96
1c3k_A147 Agglutinin; beta prism, jacalin-related, mannose, 99.95
3aqg_A158 ZG16B/PAUF, zymogen granule protein 16 homolog B; 99.95
3mit_A141 Lectin; all beta sheet protein, beta prism-I fold, 99.94
1ouw_A152 Lectin, agglutinin; beta-prism fold, mannose-bindi 99.94
4ddn_A160 Ipomoelin; beta prism, carbohydrate binding protei 99.94
1xxq_A161 Mannose-binding lectin; tetrameric B-prism fold, j 99.94
3p8s_A157 Jacalin; hemeagglutinin, sugars, sugar binding P; 99.94
3llz_A133 MPA, agglutinin alpha chain; maclura pomifera aggl 99.93
3apa_A141 Zymogen granule membrane protein 16; beta-prism fo 99.93
2gud_A122 Griffithsin, GRFT; lectins, domain swapping, manno 99.91
2gux_A138 Griffithsin, GRFT; lectins, domain swapping, manno 99.91
4gx7_A152 Cytolysin and hemolysin HLYA pore-forming toxin; l 97.75
1xez_A721 Hemolysin, cytolysin; pore-forming toxin, Pro-toxi 97.18
4gx7_A152 Cytolysin and hemolysin HLYA pore-forming toxin; l 95.74
1xez_A721 Hemolysin, cytolysin; pore-forming toxin, Pro-toxi 93.88
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana} Back     alignment and structure
Probab=100.00  E-value=5.6e-55  Score=416.27  Aligned_cols=254  Identities=23%  Similarity=0.387  Sum_probs=207.1

Q ss_pred             cEEecceeCCCCCccccCCCCcEEEEEEEE-CCeeeEEEEEEecCCceeeecccCCCCCCeeeEEEccCCCceEEEEEEE
Q 020281           13 HVTVGPWGGQNGARWDDGVFSSVRQVVISY-GAGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSVGGY   91 (328)
Q Consensus        13 ~~k~gp~GG~gG~~fddg~~~~I~~I~I~~-g~~IdsIqf~Y~~~G~~~~~~~hGg~gG~~~~~~~Ld~p~EyIt~VsG~   91 (328)
                      ++|++||||++|++|||+.+++|++|+|++ +..|++|||+|+++|+.+++..||+.++...++|+|+ |+||||+|+|+
T Consensus         1 ~~k~~~~GG~gG~~~dd~~~~~v~~I~V~~~~~~I~~I~f~Y~~~G~~~~~~~hG~~~g~~~~~~~l~-p~E~it~vsG~   79 (299)
T 2jz4_A            1 AQKVEAGGGAGGASWDDGVHDGVRKVHVGQGQDGVSSINVVYAKDSQDVEGGEHGKKTLLGFETFEVD-ADDYIVAVQVT   79 (299)
T ss_dssp             CCCCCCCSCCSSCCSSCSCCCCCCEEEEEECSSSEEEEEECEECSSCEECCCEEECCBTTBCCCEECC-TTCCEEEEEEE
T ss_pred             CeeeCCeECCCCcccccCCCCeEEEEEEEECCCEEEEEEEEEeCCCEEEECceeCCCCCCceEEEEEC-CCCEEEEEEEE
Confidence            368999999999999999889999999998 5899999999998999999899999987447899999 99999999999


Q ss_pred             EeceecCCCeEEEEEEEEECC-CccccCCCCCCceEEecC-CCCeEEEEEEEeCCcEeEEEEEEecCCCCCCCCccccCc
Q 020281           92 YGGIIDYGPVLVRSLVFESNK-RKYGPFGLQQGTHFSLPM-AGGMIAGFHGRSSWFLESIGVHLKPLLIQNPPINLSSAS  169 (328)
Q Consensus        92 ~g~~~~~g~~~I~sLtF~Tnk-~~~gpfG~~~G~~Fs~~~-~g~~IvGF~Grsg~~ldsIG~~~~~~~~~~p~~~~~~~~  169 (328)
                      |+.+..++..+|++|+|+||+ |+++|||...|++|++++ .+++|+|||||++++||+|||||.|.+++.++  +. ..
T Consensus        80 ~g~~~~~~~~~I~sL~F~TnkGrt~~~~G~~~G~~F~~~~~~g~~ivGF~Gr~g~~ldaiG~y~~p~~~~~~~--~~-k~  156 (299)
T 2jz4_A           80 YDNVFGQDSDIITSITFNTFKGKTSPPYGLETQKKFVLKDKNGGKLVGFHGRAGEALYALGAYFATTTTPVTP--AK-KL  156 (299)
T ss_dssp             EECCTTCSSCEEEEEEEEETTSCBCCCSSCCCSSEEEEECCSSCCCCCCBCCBSSSBCCCBCCCCCCCCCCCC--CB-CC
T ss_pred             ECCCCCCCceEEEEEEEEECCCcCccCCCCCCCceEEeccCCCcEEEEEEEEcCCceeeEEEEEeccCCcccc--ce-ec
Confidence            997533345799999999999 789999999999999975 57899999999999999999999987542211  11 33


Q ss_pred             CccccCCCCCC--C---CceEEEEe------------------------cc-------ccCCC-CCCceEEEEEEEEcCc
Q 020281          170 QNYVSNEIPEK--S---RGFEMATT------------------------RE-------KQDSI-YQPEILIHKSGYSGSA  212 (328)
Q Consensus       170 ~~~gg~g~~~~--g---~~~~i~l~------------------------r~-------~~~~i-~p~E~it~v~G~~g~~  212 (328)
                      +.||+.+...+  +   ....|.+.                        +.       +..+| +|+||||+|+|+|+++
T Consensus       157 g~~GG~gG~~~dd~~~~~v~~I~v~~g~~~I~~i~f~Y~~~g~~~~~~~hG~~~g~~~~e~~L~yp~Eyit~vsg~~g~~  236 (299)
T 2jz4_A          157 SAIGGDEGTAWDDGAYDGVKKVYVGQGQDGISAVKFEYNKGAENIVGGEHGKPTLLGFEEFEIDYPSEYITAVEGTYDKI  236 (299)
T ss_dssp             CCCSCSCSCBCCCCCCSCCSEEEEEECSSSEEEEEEEBCCTTCCBCCCCCSCCCTTCCEEECCCTTTCCCCEEEEEEEEC
T ss_pred             cCeeCCCCeecccCCCCceEEEEEEECCcEEEEEEEEEcCCCeEEecccCCCCCCCccEEEEeCCCCCEEEEEEEEEeCc
Confidence            44555432111  1   11112111                        00       11223 5999999999999987


Q ss_pred             ccCCceeeEEEEEEEEECCCceeecCCCCcCCceEEe---CCEEEEEEEeeCCccceeeeEEeec
Q 020281          213 ILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFSN---NGIIAGLPARKGRFIDSIGPHFIEE  274 (328)
Q Consensus       213 ~~~g~~~~~I~sL~F~Tn~~~~gpfg~G~~~G~~F~~---~~~IvGF~Grsg~~ldaIGvy~~~~  274 (328)
                      ...+  .++|+||+|+||+++|+||  |.++|++|++   +++|||||||++++||||||||.|.
T Consensus       237 ~~~~--~~~I~sL~F~Tnk~~~~pf--G~~~Gt~F~~~~~g~~IvGF~Gr~g~~ldaIGvy~~p~  297 (299)
T 2jz4_A          237 FGSD--GLIITMLRFKTNKQTSAPF--GLEAGTAFELKEEGHKIVGFHGKASELLHQFGVHVMPL  297 (299)
T ss_dssp             SSSS--CEEEEEEEECCSSSCCCCE--ECCCSEEEEEECSSEECCCEEEEESSSEEEEEECBEEC
T ss_pred             CCCC--ceEEEEEEEEECCCcccCC--cCCCCcEEEEecCCCEEEEEEEEeCCeEEEEEEEEEeC
Confidence            4322  3799999999999999999  9999999998   7899999999999999999999985
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Back     alignment and structure
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A* Back     alignment and structure
>1xxq_A Mannose-binding lectin; tetrameric B-prism fold, jacalin-fold, sugar binding protein; 1.80A {Morus nigra} PDB: 1xxr_A* 1j4t_A 1j4s_A 1j4u_A* 1vbp_A* 1vbo_A* Back     alignment and structure
>3p8s_A Jacalin; hemeagglutinin, sugars, sugar binding P; 2.00A {Artocarpus heterophyllus} Back     alignment and structure
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A* Back     alignment and structure
>1ouw_A Lectin, agglutinin; beta-prism fold, mannose-binding, jacali related, sugar binding protein; 1.37A {Calystegia sepium} SCOP: b.77.3.1 Back     alignment and structure
>3llz_A MPA, agglutinin alpha chain; maclura pomifera agglutinin, MPA complex, GAL-beta-1, 3 lectin, sugar binding protein; HET: GAL NGA; 1.55A {Maclura pomifera} PDB: 3lly_A 1jot_A* 3lm1_A* 1m26_A* 1jac_A 1kuj_A* 1ku8_A* 1pxd_A* 1ugw_C* 1ugy_C* 1uh0_A* 1uh1_A* 1ws4_C* 1ws5_C* 1ugx_A* 1ugw_A* 1ugy_A* 1ws4_A* 1ws5_A* 1toq_A* ... Back     alignment and structure
>3mit_A Lectin; all beta sheet protein, beta prism-I fold, mannose specific, binding protein; HET: MAN; 2.32A {Musa acuminata} SCOP: b.77.3.0 PDB: 1x1v_A* 3miu_A* 3miv_A 2bmz_A* 2bmy_A* 2bn0_A* Back     alignment and structure
>4ddn_A Ipomoelin; beta prism, carbohydrate binding protein, carbohydrate/sugar sugar binding protein; HET: AMG; 1.90A {Ipomoea batatas} PDB: 3r50_A* 3r52_A* 3r51_A* Back     alignment and structure
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana} Back     alignment and structure
>3apa_A Zymogen granule membrane protein 16; beta-prism fold, sugar binding protein; 1.65A {Homo sapiens} Back     alignment and structure
>3aqg_A ZG16B/PAUF, zymogen granule protein 16 homolog B; beta-prism fold, unknown function; 2.75A {Homo sapiens} Back     alignment and structure
>2gud_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, SARS, sugar binding protein; HET: MAN BMA; 0.94A {Griffithsia} SCOP: b.77.3.1 PDB: 2guc_A* 2gty_A* 2gue_A* 2hyq_A* 2hyr_A* 2nu5_A* 2nuo_A* 3lky_A 3ll0_A 3ll2_A* 3ll1_A Back     alignment and structure
>2gux_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, sugar binding protein; 2.00A {Griffithsia} SCOP: b.77.3.1 Back     alignment and structure
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A* Back     alignment and structure
>3aqg_A ZG16B/PAUF, zymogen granule protein 16 homolog B; beta-prism fold, unknown function; 2.75A {Homo sapiens} Back     alignment and structure
>3mit_A Lectin; all beta sheet protein, beta prism-I fold, mannose specific, binding protein; HET: MAN; 2.32A {Musa acuminata} SCOP: b.77.3.0 PDB: 1x1v_A* 3miu_A* 3miv_A 2bmz_A* 2bmy_A* 2bn0_A* Back     alignment and structure
>1ouw_A Lectin, agglutinin; beta-prism fold, mannose-binding, jacali related, sugar binding protein; 1.37A {Calystegia sepium} SCOP: b.77.3.1 Back     alignment and structure
>4ddn_A Ipomoelin; beta prism, carbohydrate binding protein, carbohydrate/sugar sugar binding protein; HET: AMG; 1.90A {Ipomoea batatas} PDB: 3r50_A* 3r52_A* 3r51_A* Back     alignment and structure
>1xxq_A Mannose-binding lectin; tetrameric B-prism fold, jacalin-fold, sugar binding protein; 1.80A {Morus nigra} PDB: 1xxr_A* 1j4t_A 1j4s_A 1j4u_A* 1vbp_A* 1vbo_A* Back     alignment and structure
>3p8s_A Jacalin; hemeagglutinin, sugars, sugar binding P; 2.00A {Artocarpus heterophyllus} Back     alignment and structure
>3llz_A MPA, agglutinin alpha chain; maclura pomifera agglutinin, MPA complex, GAL-beta-1, 3 lectin, sugar binding protein; HET: GAL NGA; 1.55A {Maclura pomifera} PDB: 3lly_A 1jot_A* 3lm1_A* 1m26_A* 1jac_A 1kuj_A* 1ku8_A* 1pxd_A* 1ugw_C* 1ugy_C* 1uh0_A* 1uh1_A* 1ws4_C* 1ws5_C* 1ugx_A* 1ugw_A* 1ugy_A* 1ws4_A* 1ws5_A* 1toq_A* ... Back     alignment and structure
>3apa_A Zymogen granule membrane protein 16; beta-prism fold, sugar binding protein; 1.65A {Homo sapiens} Back     alignment and structure
>2gud_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, SARS, sugar binding protein; HET: MAN BMA; 0.94A {Griffithsia} SCOP: b.77.3.1 PDB: 2guc_A* 2gty_A* 2gue_A* 2hyq_A* 2hyr_A* 2nu5_A* 2nuo_A* 3lky_A 3ll0_A 3ll2_A* 3ll1_A Back     alignment and structure
>2gux_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, sugar binding protein; 2.00A {Griffithsia} SCOP: b.77.3.1 Back     alignment and structure
>4gx7_A Cytolysin and hemolysin HLYA pore-forming toxin; lectin, carbohydrate-binding domain, beta-prism, pore-formin hemolysin, glycan-binding; HET: MMA; 2.85A {Vibrio cholerae} Back     alignment and structure
>1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A Back     alignment and structure
>4gx7_A Cytolysin and hemolysin HLYA pore-forming toxin; lectin, carbohydrate-binding domain, beta-prism, pore-formin hemolysin, glycan-binding; HET: MMA; 2.85A {Vibrio cholerae} Back     alignment and structure
>1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 328
g1ugx.1148 b.77.3.1 (B:,A:) Jacalin {Jackfruit (Artocarpus he 6e-45
g1ugx.1148 b.77.3.1 (B:,A:) Jacalin {Jackfruit (Artocarpus he 2e-05
d1vboa_149 b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus he 9e-43
d1vboa_149 b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus he 2e-05
d1c3ma_145 b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke 5e-42
d1c3ma_145 b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke 7e-08
d1ouwa_151 b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge 1e-37
d1ouwa_151 b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge 2e-05
d2guda1121 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffith 1e-27
d2guda1121 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffith 3e-04
>d1vboa_ b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]} Length = 149 Back     information, alignment and structure
>d1vboa_ b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]} Length = 149 Back     information, alignment and structure
>d1c3ma_ b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]} Length = 145 Back     information, alignment and structure
>d1c3ma_ b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]} Length = 145 Back     information, alignment and structure
>d1ouwa_ b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Length = 151 Back     information, alignment and structure
>d1ouwa_ b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Length = 151 Back     information, alignment and structure
>d2guda1 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffithsia) [TaxId: 35158]} Length = 121 Back     information, alignment and structure
>d2guda1 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffithsia) [TaxId: 35158]} Length = 121 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query328
d1vboa_149 Artocarpin {Jackfruit (Artocarpus heterophyllus) [ 100.0
d1c3ma_145 Heltuba lectin {Jerusalem artishoke (Helianthus tu 100.0
g1ugx.1148 Jacalin {Jackfruit (Artocarpus heterophyllus) [Tax 100.0
d1ouwa_151 Calystegia sepium agglutinin {Hedge bindweed (Caly 100.0
d1c3ma_145 Heltuba lectin {Jerusalem artishoke (Helianthus tu 99.96
g1ugx.1148 Jacalin {Jackfruit (Artocarpus heterophyllus) [Tax 99.95
d2guda1121 Griffithsin {Red alga (Griffithsia) [TaxId: 35158] 99.94
d1vboa_149 Artocarpin {Jackfruit (Artocarpus heterophyllus) [ 99.94
d1ouwa_151 Calystegia sepium agglutinin {Hedge bindweed (Caly 99.94
d2guda1121 Griffithsin {Red alga (Griffithsia) [TaxId: 35158] 99.88
>d1vboa_ b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Prism I
superfamily: Mannose-binding lectins
family: Mannose-binding lectins
domain: Artocarpin
species: Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]

Probab=100.00  E-value=1.7e-36  Score=259.67  Aligned_cols=144  Identities=42%  Similarity=0.863  Sum_probs=132.0

Q ss_pred             cccEEecceeCCCCCccccCCCCcEEEEEEEECCeeeEEEEEEecCCceeeecccCCCCCCeeeEEEccCCCceEEEEEE
Q 020281           11 DDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSVGG   90 (328)
Q Consensus        11 ~~~~k~gp~GG~gG~~fddg~~~~I~~I~I~~g~~IdsIqf~Y~~~G~~~~~~~hGg~gG~~~~~~~Ld~p~EyIt~VsG   90 (328)
                      ++++|+|||||++|++|||+.+++|++|+|++++.|++|||.|+++++..+...||+..+.+..++.|++|+|||++|+|
T Consensus         2 ~~~~k~GpwGG~gG~~~dd~~~~~v~~I~i~~g~~I~~i~f~Y~~~g~~~~~~~~gg~~g~~~~~~~~~~p~E~it~vsG   81 (149)
T d1vboa_           2 SQTITVGPWGGPGGNGWDDGSYTGIRQIELSYKEAIGSFSVIYDLNGDPFSGPKHTSKLPYKNVKIELKFPDEFLESVSG   81 (149)
T ss_dssp             CCCEEEEEEECSCSEEEECCCCSEEEEEEEEESSSEEEEEEEEEETTEEEECCCBCCCSCCEEEEEECCTTTCCEEEEEE
T ss_pred             CccEEEcCCcCCCCcccccCCCCCcEEEEEEECCeEEEEEEEEEcCCeEEEcCCCCCCCCCcceeEEccCccCeEEEEEE
Confidence            57899999999999999999989999999999999999999998889989999999887666788999889999999999


Q ss_pred             EEeceecC--CCeEEEEEEEEECC-CccccCCCCCCceEEecCCCCeEEEEEEEeCCcEeEEEEEEe
Q 020281           91 YYGGIIDY--GPVLVRSLVFESNK-RKYGPFGLQQGTHFSLPMAGGMIAGFHGRSSWFLESIGVHLK  154 (328)
Q Consensus        91 ~~g~~~~~--g~~~I~sLtF~Tnk-~~~gpfG~~~G~~Fs~~~~g~~IvGF~Grsg~~ldsIG~~~~  154 (328)
                      +|+.+..+  ...+|+||+|+||+ ++++|||...|++|++++++++|+|||||+|++||+||||+.
T Consensus        82 t~G~~~~~~~~~~~I~sL~f~Tn~gr~~g~~G~~~gt~F~~~~~g~~IvGF~GrsG~~ldaiGvYv~  148 (149)
T d1vboa_          82 YTGPFSALATPTPVVRSLTFKTNKGRTFGPYGDEEGTYFNLPIENGLIVGFKGRTGDLLDAIGIHMS  148 (149)
T ss_dssp             EEECCTTSSSCSCEEEEEEEEETTSCEEEEEECCCSEEEEEEEEECEEEEEEEEESSSEEEEEEEEE
T ss_pred             EECCcCCcCCcceEEEEEEEEccCCeecCCccCCCCeEEEEeCCCCEEEEEEEEcCCeEEEEEEEEE
Confidence            99987432  34689999999998 689999999999999987788999999999999999999985
>d1c3ma_ b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]} Back     information, alignment and structure
>d1ouwa_ b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Back     information, alignment and structure
>d1c3ma_ b.77.3.1 (A:) Heltuba lectin {Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]} Back     information, alignment and structure
>d2guda1 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffithsia) [TaxId: 35158]} Back     information, alignment and structure
>d1vboa_ b.77.3.1 (A:) Artocarpin {Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]} Back     information, alignment and structure
>d1ouwa_ b.77.3.1 (A:) Calystegia sepium agglutinin {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Back     information, alignment and structure
>d2guda1 b.77.3.1 (A:1-121) Griffithsin {Red alga (Griffithsia) [TaxId: 35158]} Back     information, alignment and structure