Citrus Sinensis ID: 020284
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 328 | 2.2.26 [Sep-21-2011] | |||||||
| Q8S528 | 534 | Aldehyde dehydrogenase fa | yes | no | 1.0 | 0.614 | 0.810 | 1e-160 | |
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | no | no | 1.0 | 0.609 | 0.783 | 1e-157 | |
| P11884 | 519 | Aldehyde dehydrogenase, m | yes | no | 0.969 | 0.612 | 0.641 | 1e-117 | |
| P81178 | 500 | Aldehyde dehydrogenase, m | N/A | no | 0.969 | 0.636 | 0.641 | 1e-117 | |
| P47738 | 519 | Aldehyde dehydrogenase, m | yes | no | 0.969 | 0.612 | 0.641 | 1e-116 | |
| Q2XQV4 | 521 | Aldehyde dehydrogenase, m | yes | no | 0.981 | 0.618 | 0.630 | 1e-116 | |
| P05091 | 517 | Aldehyde dehydrogenase, m | yes | no | 0.969 | 0.615 | 0.628 | 1e-116 | |
| P86886 | 500 | Retinal dehydrogenase 1 O | N/A | no | 0.981 | 0.644 | 0.602 | 1e-116 | |
| P20000 | 520 | Aldehyde dehydrogenase, m | yes | no | 0.969 | 0.611 | 0.622 | 1e-115 | |
| P27463 | 509 | Retinal dehydrogenase 1 O | no | no | 0.981 | 0.632 | 0.602 | 1e-115 |
| >sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 565 bits (1455), Expect = e-160, Method: Compositional matrix adjust.
Identities = 266/328 (81%), Positives = 299/328 (91%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M +WK+GPALACGNT+VLKTAEQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+A
Sbjct: 207 MLSWKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIA 266
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDK+AFTGST GKI+L+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+A
Sbjct: 267 SHMDVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFA 326
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE VYD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF KI
Sbjct: 327 LFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKI 386
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
LKYI+ GV+ GA L+ GG+RLG+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+KDL
Sbjct: 387 LKYIKHGVEAGATLQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDL 446
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI R+N S+YGLAAGVFT NLDTA+ LMRALRVG+VWINCFDV DA+IPFGGYK SG
Sbjct: 447 DEVIARANNSRYGLAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGI 506
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL+NYLQVKAVVT+LKNPAWL
Sbjct: 507 GREKGIYSLNNYLQVKAVVTSLKNPAWL 534
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 554 bits (1427), Expect = e-157, Method: Compositional matrix adjust.
Identities = 257/328 (78%), Positives = 295/328 (89%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MFAWKVGPALACGNTIVLKTAEQTPL+A Y KL EAGLPPGVLNIVSG+G TAGAALA
Sbjct: 211 MFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALA 270
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDKLAFTGST TGK++L LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+A
Sbjct: 271 SHMDVDKLAFTGSTDTGKVILGLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFA 330
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE VYD+FVEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK+
Sbjct: 331 LFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKV 390
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+KYI+SG++ A LE GG+++G KGY+I+PTVF+ VKDDMLIA+DEIFGPVQSILK+ D+
Sbjct: 391 MKYIKSGIESNATLECGGDQIGDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDV 450
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+N ++YGLAAGVFT NLDTAN + RAL+ G+VW+NCFDVFDAAIPFGGYK SG
Sbjct: 451 DEVIKRANETKYGLAAGVFTKNLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGN 510
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL+NYLQ+KAVVTAL PAW+
Sbjct: 511 GREKGIYSLNNYLQIKAVVTALNKPAWI 538
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/318 (64%), Positives = 244/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 193 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 252
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 253 SHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 312
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 313 LFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKI 372
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI+SG GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K +
Sbjct: 373 LGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTI 432
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG
Sbjct: 433 EEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGS 492
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 493 GRELGEYGLQAYTEVKTV 510
|
Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/318 (64%), Positives = 244/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 174 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 234 SHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 294 LFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI+SG GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K +
Sbjct: 354 LGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTI 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG
Sbjct: 414 EEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGS 473
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491
|
Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/318 (64%), Positives = 244/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 193 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 252
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH VDK+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 253 SHEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 312
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E+VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 313 LFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKI 372
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI+SG GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K +
Sbjct: 373 LGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTI 432
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG
Sbjct: 433 EEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGS 492
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 493 GRELGEYGLQAYTEVKTV 510
|
Is capable of converting retinaldehyde to retinoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/322 (63%), Positives = 246/322 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K +EQTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+A
Sbjct: 195 MQAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIA 254
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 255 SHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 314
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQID QF+KI
Sbjct: 315 LFFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKI 374
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI+SG + GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 375 LGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 434
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EVI R+N S+YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 435 EEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGS 494
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE G Y L Y +VK V +
Sbjct: 495 GRELGEYGLQAYTEVKTVTVKV 516
|
Is capable of converting retinaldehyde to retinoic acid. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/318 (62%), Positives = 243/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 191 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 250
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 251 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 310
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 311 LFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 370
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 371 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 430
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 431 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 490
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 491 GRELGEYGLQAYTEVKTV 508
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P86886|AL1A1_MESAU Retinal dehydrogenase 1 OS=Mesocricetus auratus GN=ALDH1A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/322 (60%), Positives = 245/322 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MF WK+GPAL CGNT+++K AEQTPL+ALY++ L+ EAG PPGV+NIV GYGPTAGAA++
Sbjct: 174 MFIWKIGPALGCGNTVIVKPAEQTPLTALYMASLIKEAGFPPGVVNIVPGYGPTAGAAIS 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM++DK+AFTGST GK++ + A KSNLK VTLELGGKSP IV DAD+D A E AHY
Sbjct: 234 SHMDIDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDTAVEFAHYG 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+F++QGQCC A SR FV ES+YD+FV ++ A K V+G+P GI QGPQID EQ +KI
Sbjct: 294 VFYHQGQCCVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLNSGINQGPQIDKEQHDKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L I SG GAKLE GG R G KGY+++PTVF+ V DDM IAK+EIFGPVQ I+K+K L
Sbjct: 354 LDLIESGKKEGAKLECGGGRWGNKGYFVQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSL 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
D+VI+R+N + YGLAAGVFT +LD A T+ AL+ G VW+NC+ + A PFGG+K SG
Sbjct: 414 DDVIKRANNTSYGLAAGVFTKDLDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGN 473
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE G + + Y ++K V +
Sbjct: 474 GRELGEHGIYEYTELKTVAIKI 495
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/318 (62%), Positives = 245/318 (77%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+A
Sbjct: 194 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIA 253
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 254 SHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQ+D QF+K+
Sbjct: 314 LFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKV 373
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI+SG + GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 374 LGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSM 433
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S+YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 434 EEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGS 493
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 494 GRELGEYGLQAYTEVKTV 511
|
Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/322 (60%), Positives = 242/322 (75%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MF WK+ PAL CGNT+V+K AEQTPLSALY+ L+ EAG PPGV+NIV G+GPTAGAA++
Sbjct: 183 MFIWKIAPALCCGNTVVVKPAEQTPLSALYMGSLIKEAGFPPGVVNIVPGFGPTAGAAIS 242
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
HM++DK++FTGST GK++ + A K+NLK VTLELGGKSP I+ DAD+D+AAE AH
Sbjct: 243 HHMDIDKVSFTGSTEVGKLIKEAAGKTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIG 302
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LF++QGQCC AGSR FV E +YD+FV ++ A K +GDP G+QQGPQID EQF+KI
Sbjct: 303 LFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQKI 362
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L I SG GAKLE GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K +
Sbjct: 363 LDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKTI 422
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+N + YGLAA VFT ++D A T AL+ G+VW+NC+ F A PFGG+K SG
Sbjct: 423 DEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAGTVWVNCYSAFSAQCPFGGFKMSGN 482
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE G Y L Y +VK V +
Sbjct: 483 GRELGEYGLQEYTEVKTVTIKI 504
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 328 | ||||||
| 356497822 | 538 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.609 | 0.841 | 1e-168 | |
| 356501653 | 539 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.608 | 0.844 | 1e-168 | |
| 225424691 | 538 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.609 | 0.844 | 1e-167 | |
| 356526813 | 536 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.611 | 0.844 | 1e-166 | |
| 356567618 | 536 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.611 | 0.850 | 1e-166 | |
| 223452696 | 534 | mitochondrial benzaldehyde dehydrogenase | 1.0 | 0.614 | 0.841 | 1e-165 | |
| 388504470 | 328 | unknown [Medicago truncatula] | 1.0 | 1.0 | 0.838 | 1e-165 | |
| 449440686 | 548 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.598 | 0.820 | 1e-164 | |
| 255540719 | 534 | aldehyde dehydrogenase, putative [Ricinu | 1.0 | 0.614 | 0.814 | 1e-163 | |
| 449482989 | 540 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.607 | 0.829 | 1e-163 |
| >gi|356497822|ref|XP_003517756.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 276/328 (84%), Positives = 307/328 (93%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MFAWKVGPALACGNTIVLKTAEQTPLSALY SKLLHEAGLPPGVLN++SG+GPTAGAA+A
Sbjct: 211 MFAWKVGPALACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIA 270
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM++DKLAFTGST TGK+VL+LAA+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+A
Sbjct: 271 SHMDIDKLAFTGSTETGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFA 330
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE VYD+F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KI
Sbjct: 331 LFFNQGQCCCAGSRTFVHERVYDEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKI 390
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
LKYIRSGV+ GA LETGG+R G G+YI+PTVF+ VKDDMLIAK+EIFGPVQ+ILK+KDL
Sbjct: 391 LKYIRSGVESGATLETGGDRFGNSGFYIQPTVFSNVKDDMLIAKEEIFGPVQTILKFKDL 450
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
D+VIQR+N + YGLAAGVFT N++TANTL RALRVG+VWINCFD FDAAIPFGGYK SGQ
Sbjct: 451 DDVIQRANNTHYGLAAGVFTKNINTANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQ 510
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL NYLQVKAVVT+LKNPAWL
Sbjct: 511 GREKGEYSLKNYLQVKAVVTSLKNPAWL 538
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356501653|ref|XP_003519638.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 277/328 (84%), Positives = 306/328 (93%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MFAWKVGPALACGNTIVLKTAEQTPLSALY SKLLHEAGLPPGVLNI+SG+GPTAGAA+A
Sbjct: 212 MFAWKVGPALACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNIISGFGPTAGAAIA 271
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM++DKLAFTGST TGKIVL+LAA+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+A
Sbjct: 272 SHMDIDKLAFTGSTETGKIVLELAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFA 331
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE VYD+F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KI
Sbjct: 332 LFFNQGQCCCAGSRTFVHERVYDEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKI 391
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
LKYIRSGV+ GA LETGG+R G G+YI+PTVF+ VKDDMLIAK+EIFGPVQSILK+KDL
Sbjct: 392 LKYIRSGVESGATLETGGDRFGNSGFYIQPTVFSNVKDDMLIAKEEIFGPVQSILKFKDL 451
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
D+VIQR+N + YGLAAGVFT N++TANTL RALR G+VW+NCFD FDAAIPFGGYK SGQ
Sbjct: 452 DDVIQRANNTHYGLAAGVFTKNINTANTLTRALRAGTVWVNCFDTFDAAIPFGGYKMSGQ 511
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL NYLQVKAVVT+LKNPAWL
Sbjct: 512 GREKGEYSLKNYLQVKAVVTSLKNPAWL 539
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424691|ref|XP_002263479.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296086543|emb|CBI32132.3| unnamed protein product [Vitis vinifera] gi|426204222|gb|AFY12671.1| mitochondrial aldehyde dehydrogenase 2B8 [Vitis quinquangularis] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 277/328 (84%), Positives = 306/328 (93%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M+AWK+GPALACGNTIVLKTAEQTPLSALY SKLLHEAGLPPGVLN+VSGYGPTAGAALA
Sbjct: 211 MYAWKIGPALACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVVSGYGPTAGAALA 270
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDKLAFTGST TGKIVLQLAA+SNLKPVTLELGGKSPFIVCEDA+VD+A ELAH+A
Sbjct: 271 SHMDVDKLAFTGSTATGKIVLQLAARSNLKPVTLELGGKSPFIVCEDANVDEAVELAHFA 330
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHES+YD+FVEKA A A++R VGDPFK GI+QGPQIDS+QFEKI
Sbjct: 331 LFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALRRTVGDPFKAGIEQGPQIDSDQFEKI 390
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L+YIRSGV+ GA LETGGER G +G++IKPTVF+ V+D MLIA+DEIFGPVQSILK+KDL
Sbjct: 391 LRYIRSGVENGATLETGGERFGKEGFFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFKDL 450
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
EVI+R+NA+ YGLAAGVFT NLDTANTL RAL+VG+VWINCFDVFDAAIPFGGYK SG
Sbjct: 451 GEVIRRANATSYGLAAGVFTQNLDTANTLTRALKVGTVWINCFDVFDAAIPFGGYKMSGH 510
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL NYLQVKAV+T LKNPAWL
Sbjct: 511 GREKGIYSLQNYLQVKAVITPLKNPAWL 538
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526813|ref|XP_003532011.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 277/328 (84%), Positives = 306/328 (93%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MFAWKVGPALACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALA
Sbjct: 209 MFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALA 268
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHMEVDKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+A
Sbjct: 269 SHMEVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFA 328
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE+VY++FV+KA A A++RVVGDPFKGGI+QGPQIDS+QFEKI
Sbjct: 329 LFFNQGQCCCAGSRTFVHENVYEEFVQKAKARALRRVVGDPFKGGIEQGPQIDSDQFEKI 388
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L+YIRSGV+ GA LETGG++LG KG+YI+PTVF+ VKD MLIAKDEIFGPVQSILK+KDL
Sbjct: 389 LRYIRSGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIAKDEIFGPVQSILKFKDL 448
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
EV+QR+N ++YGLAAGVFT N+DTANTL RALRVG+VWINCFD FDAAIPFGGYK SGQ
Sbjct: 449 GEVVQRANNTRYGLAAGVFTKNMDTANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQ 508
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL NYLQVKAVV LKNPAWL
Sbjct: 509 GREKGEYSLKNYLQVKAVVNPLKNPAWL 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567618|ref|XP_003552014.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/328 (85%), Positives = 305/328 (92%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MFAWKVGPALACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALA
Sbjct: 209 MFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALA 268
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHMEVDKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+A
Sbjct: 269 SHMEVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFA 328
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHESVYD+FVEKA A A+KRVVGDPFKGGI+QGPQIDS+QFEKI
Sbjct: 329 LFFNQGQCCCAGSRTFVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSDQFEKI 388
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L+YIRSGV+ GA LETGG++LG KG+YI+PTVF+ VKD MLIA+DEIFGPVQSILK+KDL
Sbjct: 389 LRYIRSGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIARDEIFGPVQSILKFKDL 448
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
EV+QR+N ++YGLAAGVFT N+DTA TL RALRVG+VWINCFD FDAAIPFGGYK SGQ
Sbjct: 449 GEVVQRANNTRYGLAAGVFTTNMDTAYTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQ 508
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL NYLQVKAVV LKNPAWL
Sbjct: 509 GREKGEYSLKNYLQVKAVVNPLKNPAWL 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223452696|gb|ACM89738.1| mitochondrial benzaldehyde dehydrogenase [Antirrhinum majus] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 276/328 (84%), Positives = 301/328 (91%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MF WKVGPALACGN++VLKTAEQTPLSAL VSKL HEAGLP GVLNIVSG+GPTAGAAL
Sbjct: 207 MFGWKVGPALACGNSVVLKTAEQTPLSALLVSKLFHEAGLPEGVLNIVSGFGPTAGAALC 266
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
HM+VDKLAFTGST TGKIVL+L+AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+A
Sbjct: 267 RHMDVDKLAFTGSTETGKIVLELSAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFA 326
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE VYD+FVEKA A A+KR VGDPFK G++QGPQ+D++QFEKI
Sbjct: 327 LFFNQGQCCCAGSRTFVHEKVYDEFVEKAKARALKRTVGDPFKAGMEQGPQVDADQFEKI 386
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
LKYIRSG + GA LETGG+RLG KGYYI+PTVF+ VKDDMLIAKDEIFGPVQ+ILK+K+L
Sbjct: 387 LKYIRSGAESGATLETGGDRLGTKGYYIQPTVFSDVKDDMLIAKDEIFGPVQTILKFKEL 446
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+N S YGLAAGVFT NLDTANT+MRALR G+VWINCFD FDAAIPFGGYK SG
Sbjct: 447 DEVIRRANNSSYGLAAGVFTQNLDTANTMMRALRAGTVWINCFDTFDAAIPFGGYKMSGI 506
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL NYLQVKAVVTALKNPAWL
Sbjct: 507 GREKGEYSLKNYLQVKAVVTALKNPAWL 534
|
Source: Antirrhinum majus Species: Antirrhinum majus Genus: Antirrhinum Family: Plantaginaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388504470|gb|AFK40301.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 585 bits (1509), Expect = e-165, Method: Compositional matrix adjust.
Identities = 275/328 (83%), Positives = 304/328 (92%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MFAWKVGPALACGNT+VLKTAEQTPLSALYV+KL HEAGLP GVLNI+SG+GPTAGAALA
Sbjct: 1 MFAWKVGPALACGNTVVLKTAEQTPLSALYVAKLFHEAGLPAGVLNIISGFGPTAGAALA 60
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDKLAFTGST TGK+VLQLAAKSNLKPVTLELGGKSPFIVCEDAD+D+A ELAH+A
Sbjct: 61 SHMDVDKLAFTGSTDTGKVVLQLAAKSNLKPVTLELGGKSPFIVCEDADIDEAVELAHFA 120
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE V+++FVEKA A A+KR VGDPFK G +QGPQIDS+QFEKI
Sbjct: 121 LFFNQGQCCCAGSRTFVHERVHEEFVEKAKARALKRAVGDPFKSGTEQGPQIDSKQFEKI 180
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
LKYIRSGV+ GA LETGGERLG+KGYYI+PTVF+ V+D M IAK+EIFGPVQ+ILK+KDL
Sbjct: 181 LKYIRSGVENGATLETGGERLGSKGYYIQPTVFSNVQDGMQIAKEEIFGPVQTILKFKDL 240
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
EVIQR+N S+YGLAAGVFT N+DTANTL RAL+VG+VW+NCFD FDAAIPFGGYK SGQ
Sbjct: 241 GEVIQRANNSKYGLAAGVFTKNIDTANTLTRALKVGTVWVNCFDTFDAAIPFGGYKMSGQ 300
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL NYLQVKAVVT LKNPAWL
Sbjct: 301 GREKGEYSLKNYLQVKAVVTPLKNPAWL 328
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449440686|ref|XP_004138115.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 269/328 (82%), Positives = 307/328 (93%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MFAWKVGPALACGNT+VLKTAEQTPL+ALYV+KLLHEAGLPPGVLNIVSGYGPTAGAALA
Sbjct: 221 MFAWKVGPALACGNTVVLKTAEQTPLTALYVAKLLHEAGLPPGVLNIVSGYGPTAGAALA 280
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDKLAFTGST+TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+A
Sbjct: 281 SHMDVDKLAFTGSTSTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFA 340
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE V+++FVEK+ A A +RVVGDPFK G++QGPQIDS+QFEK+
Sbjct: 341 LFFNQGQCCCAGSRTFVHERVHEEFVEKSKARAQRRVVGDPFKKGVEQGPQIDSDQFEKV 400
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L+YI+SG++ A LE GG RLG+KGY+I+PTVF+ VKDDMLIAKDEIFGPVQSILK+KD+
Sbjct: 401 LRYIKSGIESNATLECGGGRLGSKGYFIEPTVFSNVKDDMLIAKDEIFGPVQSILKFKDI 460
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI R+N+++YGLA+G+FT N+DTANTL+R LR G+VW+NCFD+FDAAIPFGGYK SG
Sbjct: 461 DEVIHRANSTRYGLASGIFTSNIDTANTLIRGLRTGTVWVNCFDIFDAAIPFGGYKMSGI 520
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL NYLQVKAVVT LKNPAWL
Sbjct: 521 GREKGIYSLQNYLQVKAVVTPLKNPAWL 548
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255540719|ref|XP_002511424.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223550539|gb|EEF52026.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/328 (81%), Positives = 306/328 (93%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+FAWKVGPALACGNTIVLKTAEQTPL+ALY +KL HEAGLPPGVLN+VSGYGPTAGAALA
Sbjct: 207 LFAWKVGPALACGNTIVLKTAEQTPLTALYAAKLFHEAGLPPGVLNVVSGYGPTAGAALA 266
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDKLAFTGST TGKIVL+L+AKSNLKPVTLELGGKSPF+VCEDADVDKA ELAH+A
Sbjct: 267 SHMDVDKLAFTGSTETGKIVLELSAKSNLKPVTLELGGKSPFVVCEDADVDKAVELAHFA 326
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRT+VHE VYD+F+EKA A AM+RVVGDPF+ G++QGPQIDSEQF+K+
Sbjct: 327 LFFNQGQCCCAGSRTYVHERVYDEFLEKAKARAMRRVVGDPFRKGVEQGPQIDSEQFQKV 386
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L+YI+SG++ A LE GG+R G +GY+I+PTVF+ V+DDMLIA+DEIFGPVQSILK+KDL
Sbjct: 387 LRYIKSGIESNATLECGGDRFGPRGYFIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDL 446
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+N ++YGLAAGVFT+N+DTANTL RALR G+VW+NCFDVFDAAIPFGGYK SG
Sbjct: 447 DEVIRRANTTRYGLAAGVFTNNIDTANTLSRALRAGTVWVNCFDVFDAAIPFGGYKMSGI 506
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL+NYLQVKAVVT LKNPAWL
Sbjct: 507 GREKGIYSLNNYLQVKAVVTPLKNPAWL 534
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449482989|ref|XP_004156463.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 272/328 (82%), Positives = 303/328 (92%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MFAWKVGPALACGNTIVLKTAEQTPLSAL V+KL HEAGLP GVLNIVSGYGPTAGAALA
Sbjct: 213 MFAWKVGPALACGNTIVLKTAEQTPLSALLVAKLFHEAGLPEGVLNIVSGYGPTAGAALA 272
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHMEVDKLAFTGST TGK+VL+LA+KSNLKPVTLELGGKSPFIVCEDADVDKA E+AH+A
Sbjct: 273 SHMEVDKLAFTGSTETGKVVLELASKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFA 332
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE V+D+FVEKA A RVVGDPF GGI+QGPQ+D+EQF+KI
Sbjct: 333 LFFNQGQCCCAGSRTFVHEKVHDEFVEKARNRAANRVVGDPFLGGIEQGPQVDAEQFKKI 392
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
LKYI+ G++GGA LE GG+R G+KGYY++PTVF+ VKDDM IA+DEIFGPVQ+ILKYKD+
Sbjct: 393 LKYIKYGIEGGATLEAGGDRFGSKGYYVQPTVFSNVKDDMKIAEDEIFGPVQTILKYKDI 452
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+NAS+YGLAAGVFT N++TAN L R+LRVGSVWINCFDVFDAA+PFGGYK SG
Sbjct: 453 DEVIRRANASRYGLAAGVFTQNINTANRLTRSLRVGSVWINCFDVFDAAVPFGGYKMSGH 512
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSLSNYLQVKAVVT L+NPAWL
Sbjct: 513 GREKGIYSLSNYLQVKAVVTPLENPAWL 540
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 328 | ||||||
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 1.0 | 0.614 | 0.810 | 8.4e-145 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 1.0 | 0.609 | 0.783 | 3.7e-142 | |
| RGD|69219 | 519 | Aldh2 "aldehyde dehydrogenase | 0.969 | 0.612 | 0.641 | 8.1e-108 | |
| MGI|MGI:99600 | 519 | Aldh2 "aldehyde dehydrogenase | 0.969 | 0.612 | 0.641 | 1.7e-107 | |
| UNIPROTKB|Q2XQV4 | 521 | ALDH2 "Aldehyde dehydrogenase, | 0.969 | 0.610 | 0.638 | 3.5e-107 | |
| UNIPROTKB|F1LN88 | 519 | Aldh2 "Aldehyde dehydrogenase, | 0.963 | 0.608 | 0.639 | 7.2e-107 | |
| UNIPROTKB|P20000 | 520 | ALDH2 "Aldehyde dehydrogenase, | 0.969 | 0.611 | 0.622 | 1.2e-106 | |
| UNIPROTKB|E7EUE5 | 470 | ALDH2 "Aldehyde dehydrogenase, | 0.969 | 0.676 | 0.628 | 1.5e-106 | |
| UNIPROTKB|F8W0A9 | 377 | ALDH2 "Aldehyde dehydrogenase, | 0.969 | 0.843 | 0.628 | 1.5e-106 | |
| UNIPROTKB|P05091 | 517 | ALDH2 "Aldehyde dehydrogenase, | 0.969 | 0.615 | 0.628 | 1.5e-106 |
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1415 (503.2 bits), Expect = 8.4e-145, P = 8.4e-145
Identities = 266/328 (81%), Positives = 299/328 (91%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M +WK+GPALACGNT+VLKTAEQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+A
Sbjct: 207 MLSWKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIA 266
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDK+AFTGST GKI+L+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+A
Sbjct: 267 SHMDVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFA 326
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE VYD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF KI
Sbjct: 327 LFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKI 386
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
LKYI+ GV+ GA L+ GG+RLG+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+KDL
Sbjct: 387 LKYIKHGVEAGATLQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDL 446
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI R+N S+YGLAAGVFT NLDTA+ LMRALRVG+VWINCFDV DA+IPFGGYK SG
Sbjct: 447 DEVIARANNSRYGLAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGI 506
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL+NYLQVKAVVT+LKNPAWL
Sbjct: 507 GREKGIYSLNNYLQVKAVVTSLKNPAWL 534
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1390 (494.4 bits), Expect = 3.7e-142, P = 3.7e-142
Identities = 257/328 (78%), Positives = 295/328 (89%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MFAWKVGPALACGNTIVLKTAEQTPL+A Y KL EAGLPPGVLNIVSG+G TAGAALA
Sbjct: 211 MFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALA 270
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDKLAFTGST TGK++L LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+A
Sbjct: 271 SHMDVDKLAFTGSTDTGKVILGLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFA 330
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE VYD+FVEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK+
Sbjct: 331 LFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKV 390
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+KYI+SG++ A LE GG+++G KGY+I+PTVF+ VKDDMLIA+DEIFGPVQSILK+ D+
Sbjct: 391 MKYIKSGIESNATLECGGDQIGDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDV 450
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+N ++YGLAAGVFT NLDTAN + RAL+ G+VW+NCFDVFDAAIPFGGYK SG
Sbjct: 451 DEVIKRANETKYGLAAGVFTKNLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGN 510
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL+NYLQ+KAVVTAL PAW+
Sbjct: 511 GREKGIYSLNNYLQIKAVVTALNKPAWI 538
|
|
| RGD|69219 Aldh2 "aldehyde dehydrogenase 2 family (mitochondrial)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 204/318 (64%), Positives = 244/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 193 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 252
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 253 SHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 312
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 313 LFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKI 372
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI+SG GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K +
Sbjct: 373 LGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTI 432
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG
Sbjct: 433 EEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGS 492
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 493 GRELGEYGLQAYTEVKTV 510
|
|
| MGI|MGI:99600 Aldh2 "aldehyde dehydrogenase 2, mitochondrial" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 204/318 (64%), Positives = 244/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 193 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 252
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH VDK+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 253 SHEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 312
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E+VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 313 LFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKI 372
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI+SG GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K +
Sbjct: 373 LGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTI 432
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG
Sbjct: 433 EEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGS 492
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 493 GRELGEYGLQAYTEVKTV 510
|
|
| UNIPROTKB|Q2XQV4 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 203/318 (63%), Positives = 245/318 (77%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K +EQTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+A
Sbjct: 195 MQAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIA 254
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 255 SHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 314
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQID QF+KI
Sbjct: 315 LFFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKI 374
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI+SG + GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 375 LGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 434
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EVI R+N S+YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 435 EEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGS 494
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 495 GRELGEYGLQAYTEVKTV 512
|
|
| UNIPROTKB|F1LN88 Aldh2 "Aldehyde dehydrogenase, mitochondrial" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 202/316 (63%), Positives = 241/316 (76%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
AW GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH
Sbjct: 195 AWSXGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASH 254
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
+VDK+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALF
Sbjct: 255 EDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 314
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
FNQGQCCCAGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL
Sbjct: 315 FNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILG 374
Query: 183 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 242
YI+SG GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++E
Sbjct: 375 YIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEE 434
Query: 243 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 302
V+ R+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GR
Sbjct: 435 VVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGR 494
Query: 303 EKGSYSLSNYLQVKAV 318
E G Y L Y +VK V
Sbjct: 495 ELGEYGLQAYTEVKTV 510
|
|
| UNIPROTKB|P20000 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 198/318 (62%), Positives = 245/318 (77%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+A
Sbjct: 194 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIA 253
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 254 SHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQ+D QF+K+
Sbjct: 314 LFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKV 373
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI+SG + GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 374 LGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSM 433
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S+YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 434 EEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGS 493
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 494 GRELGEYGLQAYTEVKTV 511
|
|
| UNIPROTKB|E7EUE5 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 200/318 (62%), Positives = 243/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 144 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 203
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 204 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 263
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 264 LFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 323
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 324 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 383
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 384 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 443
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 444 GRELGEYGLQAYTEVKTV 461
|
|
| UNIPROTKB|F8W0A9 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 200/318 (62%), Positives = 243/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 51 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 110
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 111 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 170
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 171 LFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 230
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 231 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 290
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 291 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 350
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 351 GRELGEYGLQAYTEVKTV 368
|
|
| UNIPROTKB|P05091 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 200/318 (62%), Positives = 243/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 191 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 250
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 251 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 310
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 311 LFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 370
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 371 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 430
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 431 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 490
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 491 GRELGEYGLQAYTEVKTV 508
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5440 | 0.9695 | 0.6398 | yes | no |
| P47738 | ALDH2_MOUSE | 1, ., 2, ., 1, ., 3 | 0.6415 | 0.9695 | 0.6127 | yes | no |
| P11884 | ALDH2_RAT | 1, ., 2, ., 1, ., 3 | 0.6415 | 0.9695 | 0.6127 | yes | no |
| Q8S528 | AL2B7_ARATH | 1, ., 2, ., 1, ., 3 | 0.8109 | 1.0 | 0.6142 | yes | no |
| Q5RF00 | ALDH2_PONAB | 1, ., 2, ., 1, ., 3 | 0.6257 | 0.9695 | 0.6150 | yes | no |
| P46367 | ALDH4_YEAST | 1, ., 2, ., 1, ., 3 | 0.5496 | 0.9786 | 0.6184 | yes | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5786 | 0.9695 | 0.6398 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.5534 | 0.9695 | 0.6322 | yes | no |
| P20000 | ALDH2_BOVIN | 1, ., 2, ., 1, ., 3 | 0.6226 | 0.9695 | 0.6115 | yes | no |
| P05091 | ALDH2_HUMAN | 1, ., 2, ., 1, ., 3 | 0.6289 | 0.9695 | 0.6150 | yes | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.6304 | 0.9817 | 0.6180 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00028844001 | SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (538 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00038001001 | SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (622 aa) | • | • | • | • | 0.951 | |||||
| PDC1 | SubName- Full=Chromosome chr8 scaffold_115, whole genome shotgun sequence; (605 aa) | • | • | 0.911 | |||||||
| GSVIVG00024065001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (607 aa) | • | • | 0.910 | |||||||
| GSVIVG00005787001 | SubName- Full=Chromosome chr3 scaffold_158, whole genome shotgun sequence; (360 aa) | • | • | • | 0.902 | ||||||
| GSVIVG00001276001 | SubName- Full=Chromosome undetermined scaffold_114, whole genome shotgun sequence; (290 aa) | • | 0.901 | ||||||||
| GSVIVG00035907001 | SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (215 aa) | • | 0.899 | ||||||||
| ADH2 | SubName- Full=Putative uncharacterized protein (Chromosome chr4 scaffold_73, whole genome shotg [...] (380 aa) | • | 0.899 | ||||||||
| GSVIVG00034833001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | ||||||||
| GSVIVG00034832001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | ||||||||
| GSVIVG00034830001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 328 | |||
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-169 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-161 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-160 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-158 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-151 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-146 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-142 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-140 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-137 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-137 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-136 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-134 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-130 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-130 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-128 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-128 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-124 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-123 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-121 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-119 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-117 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-117 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-115 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-114 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-114 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-113 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-113 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-113 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-112 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-111 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-111 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-110 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-110 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-107 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-106 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-104 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-103 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-101 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-101 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-101 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 3e-99 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 2e-98 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 9e-97 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 4e-96 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 4e-95 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 2e-94 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 2e-94 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 2e-94 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 2e-93 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 8e-93 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 9e-93 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 8e-92 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 5e-91 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 5e-90 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 3e-88 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 8e-88 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 5e-87 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-86 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 4e-86 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-85 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 2e-85 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 4e-83 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 2e-81 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 4e-81 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 3e-78 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 4e-78 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 3e-76 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 9e-72 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 5e-71 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 2e-69 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 3e-67 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 4e-65 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 1e-63 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 2e-63 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 5e-63 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 4e-61 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 9e-61 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-60 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 3e-58 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 7e-57 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 9e-56 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 1e-50 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 1e-49 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 5e-47 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 8e-47 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 3e-46 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 6e-46 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 3e-45 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 8e-45 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 2e-44 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 3e-44 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 1e-43 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 7e-43 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 1e-40 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 4e-40 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 9e-38 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 2e-36 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 6e-33 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 5e-29 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 9e-27 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 8e-23 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 2e-22 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 3e-19 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 1e-17 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 2e-16 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 7e-15 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 2e-11 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 2e-06 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 6e-04 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 0.004 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 692 bits (1787), Expect = 0.0
Identities = 282/328 (85%), Positives = 309/328 (94%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MFAWKVGPALACGNTIVLKTAEQTPLSALY +KLLHEAGLPPGVLN+VSG+GPTAGAALA
Sbjct: 211 MFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALA 270
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDKLAFTGST TGKIVL+LAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+A
Sbjct: 271 SHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFA 330
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHE VYD+FVEKA A A+KRVVGDPFK G++QGPQIDSEQFEKI
Sbjct: 331 LFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKI 390
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L+YI+SGV+ GA LE GG+R G+KGYYI+PTVF+ V+DDMLIA+DEIFGPVQSILK+KDL
Sbjct: 391 LRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDL 450
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+N ++YGLAAGVFT NLDTANTL RALRVG+VW+NCFDVFDAAIPFGGYK SG
Sbjct: 451 DEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGI 510
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GREKG YSL+NYLQVKAVVT LKNPAWL
Sbjct: 511 GREKGIYSLNNYLQVKAVVTPLKNPAWL 538
|
Length = 538 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 617 bits (1593), Expect = 0.0
Identities = 251/320 (78%), Positives = 289/320 (90%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MFAWKVGPALACGNTIVLK AEQTPLSAL +KL EAGLP GVLNIV+G+GPTAGAA+A
Sbjct: 157 MFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIA 216
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDK+AFTGST GKI++QLAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+A
Sbjct: 217 SHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFA 276
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFVHES+YD+FVEKA A A+KRVVGDPF+ G++QGPQ+D EQFEKI
Sbjct: 277 LFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKI 336
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI G + GA L TGG+R+G+KGYYI+PT+F+ VKDDM IA+DEIFGPVQSILK+K +
Sbjct: 337 LSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTV 396
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+N S+YGLAAGVF+ N+DTANTL RAL+ G+VW+NC+DVFDA+IPFGGYK SG
Sbjct: 397 DEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGI 456
Query: 301 GREKGSYSLSNYLQVKAVVT 320
GREKG Y+L+NYLQVKAVV
Sbjct: 457 GREKGIYALNNYLQVKAVVM 476
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 576 bits (1487), Expect = 0.0
Identities = 212/319 (66%), Positives = 257/319 (80%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GNT+VLK AEQTPLSALY+++L+ EAG PPGV+NIV G+GPTAGAA++
Sbjct: 157 MLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAIS 216
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDK+AFTGST G+ +++ AAKSNLK VTLELGGKSP IV +DAD+DKA E A +
Sbjct: 217 SHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFG 276
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFNQGQCCCAGSR FV ES+YD+FVEK A A KRVVGDPF QGPQ+ QF+KI
Sbjct: 277 IFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKI 336
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI SG GA L TGGER G+KGY+I+PTVFT VKDDM IAK+EIFGPV +ILK+K
Sbjct: 337 LSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTE 396
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+N ++YGLAAGVFT +++ A + RAL+ G+VW+N ++VFDAA+PFGG+KQSG
Sbjct: 397 DEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGF 456
Query: 301 GREKGSYSLSNYLQVKAVV 319
GRE G L Y QVKAV
Sbjct: 457 GRELGEEGLEEYTQVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 547 bits (1412), Expect = 0.0
Identities = 206/319 (64%), Positives = 248/319 (77%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALACGNT+VLK AEQTPL+ALY++ L+ EAG PPGV+N+V GYGPTAGAA++
Sbjct: 161 MAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAIS 220
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH ++DK+AFTGST GK++ Q A KSNLK VTLELGGKSP IV DAD+D A E AH A
Sbjct: 221 SHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEA 280
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFN GQCCCAGSRTFV ES+YD+FV+++ A KRVVG+PF +QGPQID EQF+KI
Sbjct: 281 LFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKI 340
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L+ I SG GAKLE GG+R G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I K+K +
Sbjct: 341 LELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTI 400
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+N + YGLAA VFT ++D A T ALR G+VW+NC++V PFGGYK SG
Sbjct: 401 DEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGN 460
Query: 301 GREKGSYSLSNYLQVKAVV 319
GRE G Y L Y +VK V
Sbjct: 461 GRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 477 bits (1231), Expect = e-169
Identities = 168/319 (52%), Positives = 215/319 (67%), Gaps = 2/319 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ AWK+ PALA GNT+VLK +E TPL+AL +++L EAGLPPGVLN+V+G G G AL
Sbjct: 142 LAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEEAGLPPGVLNVVTGSGSEVGDALV 201
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +VDK++FTGST G+ + + AAK NLK VTLELGGK+P IV +DAD+D A E A +
Sbjct: 202 EHPDVDKVSFTGSTEVGRRIAKAAAK-NLKRVTLELGGKNPLIVFDDADLDAAVEGAVFG 260
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F N GQ C AGSR VHES+YD+FVE+ A VGDP GP I +Q E++
Sbjct: 261 AFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERV 320
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI + GAKL GGE KGY+++PTV V DM IA++EIFGPV S++ +KD
Sbjct: 321 LSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDE 380
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSG 299
DE I+ +N ++YGLAAGVFT++L+ A + R L G VWIN + D A+PFGG+KQSG
Sbjct: 381 DEAIELANDTEYGLAAGVFTNDLERALRVARRLEAGMVWINDYTTGDPEALPFGGFKQSG 440
Query: 300 QGREKGSYSLSNYLQVKAV 318
GRE G L Y + K V
Sbjct: 441 FGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 460 bits (1185), Expect = e-161
Identities = 187/328 (57%), Positives = 247/328 (75%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MF KV PALA G T+V+K AEQTPLSAL+ + L AG+P GV+N+V+G+GPTAGAA+A
Sbjct: 174 MFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIA 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDK++FTGST G+ ++Q AA SNLK V+LELGGKSP ++ +DADVD A +LA
Sbjct: 234 SHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLG 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+F+N+G+ C A SR +V E +YD+FV+K A VVGDPF +QGPQ+D +QFEKI
Sbjct: 294 IFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI G GA L TGG+ G KGYYI+PT+FT V +DM IA+DEIFGPV S++K+K +
Sbjct: 354 LSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTV 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+E I+++N ++YGLAAG+ T +LD ANT+ R++R G++W+NC+ FD PFGGYK SG
Sbjct: 414 EEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGF 473
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
GR++G +L YLQVK+VVT L N WL
Sbjct: 474 GRDQGMDALDKYLQVKSVVTPLYNSPWL 501
|
Length = 501 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 454 bits (1170), Expect = e-160
Identities = 168/322 (52%), Positives = 217/322 (67%), Gaps = 3/322 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ AWK+ PALA GNT+VLK +E TPL+AL +++LL EAGLPPGVLN+V+G G GAALA
Sbjct: 112 LAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALA 171
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH VDK++FTGST GK +++ AA+ NLK VTLELGGKSP IV +DAD+D A + A +
Sbjct: 172 SHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFG 230
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F N GQ C A SR VHES+YD+FVE+ VG+P GP I + Q +++
Sbjct: 231 AFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRV 290
Query: 181 LKYIRSGVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
L YI GAKL GG+RL G KGY++ PTV T V DM IA++EIFGPV ++ +KD
Sbjct: 291 LAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKD 350
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQS 298
+E I+ +N ++YGLAAGVFT +L+ A + L G+VWIN + V + + PFGG KQS
Sbjct: 351 EEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQS 410
Query: 299 GQGREKGSYSLSNYLQVKAVVT 320
G GRE G Y L Y + K V
Sbjct: 411 GIGREGGPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 450 bits (1158), Expect = e-158
Identities = 184/318 (57%), Positives = 240/318 (75%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GNTIVLK +E TPLSALY++KL+ EAG PPGV+N+VSGYG T G A++
Sbjct: 160 MCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAIS 219
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM++DK+AFTGST G+ V++ AAKSNLK VTLELGGKSP IV +DAD++ A Y
Sbjct: 220 SHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYG 279
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFN GQ CCAGSR +V E +YD+FV++ A K VGDPF QGPQ+ Q+E+I
Sbjct: 280 IFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERI 339
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+ YI SG GA +ETGG+R G +GY+I+PT+FT V +DM I K+EIFGPV +++K+K
Sbjct: 340 MSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTE 399
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+E I+R+N S YGLAA VFT+N++ A + AL+ G+VW+NC+++ +PFGGYKQSG
Sbjct: 400 EEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGI 459
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y+L NY Q+KAV
Sbjct: 460 GRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 432 bits (1112), Expect = e-151
Identities = 164/321 (51%), Positives = 218/321 (67%), Gaps = 3/321 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GN++VLK AEQ+PL+AL +++L EAGLP GVLN+V G+G TAG AL
Sbjct: 140 MAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALG 199
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHY 119
HM+VD LAFTGST G+ L+ + +SNLK V LE GGKSP IV DA D+D AAE A
Sbjct: 200 LHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAA 259
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
+F+NQG+ C AGSR VHES+ D+F+EK A A + GDP + G + F+K
Sbjct: 260 GIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDK 319
Query: 180 ILKYIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237
+L YI SG GA+L GG+R+ G++++PTVF GV DM IA++EIFGPV S++ +
Sbjct: 320 VLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITF 379
Query: 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ 297
+E + +N S YGLAA V+T +L A+ + R LR G+VW+NCFD D PFGG+KQ
Sbjct: 380 DSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQ 439
Query: 298 SGQGREKGSYSLSNYLQVKAV 318
SG GR+K ++L Y ++K
Sbjct: 440 SGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 420 bits (1082), Expect = e-146
Identities = 169/322 (52%), Positives = 215/322 (66%), Gaps = 5/322 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GNT+V+K AE TPLS LY + L+ EAG PPGV+NI+ GYG AG+ALA
Sbjct: 160 MAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALA 219
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +VDK+AFTGST TG++V++ AA NLK VTLE GGKSP +V EDAD+D+A + A
Sbjct: 220 EHPDVDKIAFTGSTATGRLVMKAAA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAG 278
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR-VVGDPFKGGIQQGPQIDSEQFEK 179
+ +N GQ C A SR +V ES+YD+FVEK + VG PF GPQ+ Q+++
Sbjct: 279 IMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDR 338
Query: 180 ILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
+L YI G GAKL GGE+ KGY+I PT+FT V DM I K+EIFGPV I K
Sbjct: 339 VLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISK 398
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 296
+K +E I+++N + YGLAA VFT ++ A+ + R L G VWIN + D +PFGG+K
Sbjct: 399 FKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFK 458
Query: 297 QSGQGREKGSYSLSNYLQVKAV 318
SG GRE G Y L Y Q KAV
Sbjct: 459 MSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 410 bits (1055), Expect = e-142
Identities = 165/320 (51%), Positives = 211/320 (65%), Gaps = 5/320 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ AWK+ PALA GNT+VLK +EQTPLSAL +++L EAGLP GVLN+V+G G G AL
Sbjct: 149 LAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALV 208
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +VD ++FTGST G+ + AA NLKPVTLELGGKSP IV EDAD+D A + A +
Sbjct: 209 AHPDVDAISFTGSTAVGRAIAAAAAA-NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFG 267
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
FFN GQ C A SR VHESVYD+FVE+ A A VGDP GP I EQ +++
Sbjct: 268 AFFNAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPSTDLGPLISEEQLDRV 327
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
YI V GA+L GG+R G GY+++PT+ GV DM IA++EIFGPV ++++KD
Sbjct: 328 EGYIEDAVAEGARLLAGGKRPG--GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDE 385
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQS 298
+E I+ +N ++YGLAA +FT +L A + R L G V IN A +PFGG KQS
Sbjct: 386 EEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQS 445
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G GRE G Y L + +VK V
Sbjct: 446 GLGREGGKYGLEEFTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 403 bits (1038), Expect = e-140
Identities = 151/323 (46%), Positives = 205/323 (63%), Gaps = 5/323 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A K+ PALA GNT+VLK +E TP S L ++KL EAG PPGV+N+V+G+GP G AL
Sbjct: 135 LLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALV 194
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H V K+AFTG T TG+ + + AA+ NL PVTLELGGKSP IV +DAD+D A
Sbjct: 195 EHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVFDDADLDAAVNGVVAG 253
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+F GQ C AGSR V S+YD+FVE+ A A VGDP Q GP Q EK+
Sbjct: 254 IFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKV 313
Query: 181 LKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
+Y+ + GA++ TGGER GY+ +PT+ V +DM IA++E+FGPV S++
Sbjct: 314 ERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIP 373
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 296
+ D +E I +N S+YGLAAG++T +L A+ + RA+ G+VW+N + + PFGG+K
Sbjct: 374 FDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFK 433
Query: 297 QSGQGREKGSYSLSNYLQVKAVV 319
SG GRE G ++ Y Q K+V
Sbjct: 434 DSGIGRENGIEAIREYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 396 bits (1021), Expect = e-137
Identities = 154/319 (48%), Positives = 213/319 (66%), Gaps = 5/319 (1%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK+ PALA GNT+VLK +E TPL+A +++L +EAGLPPGV+N+V G+GP AGAAL +H
Sbjct: 136 WKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHP 195
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
+VD ++FTG T TG+ +++ AA NLKPV+LELGGK+P IV DAD+D+A + A + F
Sbjct: 196 DVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFS 254
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
N G+ C AGSR V S+YD+F+E+ A VGDP + GP I E EK+L Y
Sbjct: 255 NNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGY 314
Query: 184 IRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
+ GA + TGG R GY+++PTV TG+ +D +A++EIFGPV +++ + D
Sbjct: 315 VELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDD 374
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
+E I+ +N + YGLAA V+T +L A+ + R L G+VW+NC+ V D PFGG K SG
Sbjct: 375 EEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASG 434
Query: 300 QGREKGSYSLSNYLQVKAV 318
GRE G YSL Y ++K V
Sbjct: 435 IGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 396 bits (1020), Expect = e-137
Identities = 166/322 (51%), Positives = 227/322 (70%), Gaps = 1/322 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
AWKV PALA GNT+VLK AE TPLSAL +++L+ EAG P GVLN+V+G+G AGAAL
Sbjct: 133 FAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALV 192
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +VDK+ FTGST G+ ++Q A NLK V+LELGGKS IV DAD+D A A
Sbjct: 193 EHPDVDKITFTGSTAVGRKIMQ-GAAGNLKRVSLELGGKSANIVFADADLDAAVRAAATG 251
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+F+NQGQ C AGSR VHES+YD+F+E+ +LA GDP Q GP + QF+++
Sbjct: 252 IFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRV 311
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L Y+ G + GA+L TGG+R GA+G++++PT+F V +M IA++EIFGPV S+++++D
Sbjct: 312 LDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDE 371
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+E ++ +N ++YGLAAGV+T +L A+ + AL+ G+VWIN ++ FD PFGGYKQSG
Sbjct: 372 EEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGF 431
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE G +L Y +VK+V L
Sbjct: 432 GREMGREALDEYTEVKSVWVNL 453
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 393 bits (1012), Expect = e-136
Identities = 152/319 (47%), Positives = 201/319 (63%), Gaps = 7/319 (2%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
KV PALA G T+VLK +E PLSA+ ++++L EAGLP GV N+V+G GP G AL++H +
Sbjct: 150 KVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPD 209
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
VD ++FTGST GK V + AA + +K V LELGGKS I+ +DAD++KA A F N
Sbjct: 210 VDMVSFTGSTRAGKRVAEAAADT-VKRVALELGGKSANIILDDADLEKAVPRGVAACFAN 268
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C A +R V S Y + E A A A VVGDP GP + QF+++ YI
Sbjct: 269 SGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYI 328
Query: 185 RSGVDGGAKLETGG----ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+ G++ GA+L GG E L +GY++KPTVF V DM IA++EIFGPV SI+ Y D
Sbjct: 329 QKGIEEGARLVAGGPGRPEGL-ERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDE 387
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DE I +N + YGLA V++ + + A + R LR G V IN F+ PFGGYKQSG
Sbjct: 388 DEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHIN-GAAFNPGAPFGGYKQSGN 446
Query: 301 GREKGSYSLSNYLQVKAVV 319
GRE G Y L +L+VK++
Sbjct: 447 GREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 389 bits (1001), Expect = e-134
Identities = 156/318 (49%), Positives = 199/318 (62%), Gaps = 1/318 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M K+ PALA G T+VLK AE+TPLSAL +++L EAGLP GVLN+V+G G AL
Sbjct: 133 MITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALC 192
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ V K++FTGST GK+++ AA +K V+LELGG +PFIV +DAD+DKA + A +
Sbjct: 193 ASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFDDADLDKAVDGAIAS 251
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F N GQ C +R +VHES+YD+FVEK K VG+ G GP I+ EK+
Sbjct: 252 KFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKV 311
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+ V GAK+ TGG+RLG GY+ +PTV T V DDMLI +E FGPV I+ +
Sbjct: 312 EALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTE 371
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI R+N + YGLAA VFT +L A + AL G V IN + DA PFGG K+SG
Sbjct: 372 DEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGL 431
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G L YL+ K V
Sbjct: 432 GREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 381 bits (980), Expect = e-130
Identities = 150/319 (47%), Positives = 201/319 (63%), Gaps = 6/319 (1%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK PALA GN ++ K +E TPL+AL ++++ EAGLP GV N+V G G GA L H
Sbjct: 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHP 219
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
++ K++FTG TGK V+ AA S LK VT+ELGGKSP IV +DAD+D+AA++A A F+
Sbjct: 220 DIAKVSFTGGVPTGKKVMAAAAAS-LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFY 278
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ GQ C G+R FV +S+ F + + +GDP GP + +K+L Y
Sbjct: 279 SSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGY 338
Query: 184 IRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
I G GA+L GGERL A G ++ PTVFT DDM I ++EIFGPV S+L + D
Sbjct: 339 IEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDD 398
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
DEVI R+N ++YGLAAGVFT +L A+ ++ L G WIN + A +P GGYKQSG
Sbjct: 399 EDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSG 458
Query: 300 QGREKGSYSLSNYLQVKAV 318
GRE G +L +Y Q+K+V
Sbjct: 459 IGRENGIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 378 bits (973), Expect = e-130
Identities = 146/327 (44%), Positives = 207/327 (63%), Gaps = 5/327 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
AWK+ PALA GNT+V+K +E TPL+ + + +L+ EAGLP GV+N+V+G G T GA LA
Sbjct: 150 QAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELA 209
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+VD ++FTG T TG+ +++ AA N+K V LELGGK+P IV DAD + A + A
Sbjct: 210 ESPDVDLVSFTGGTATGRSIMRAAAG-NVKKVALELGGKNPNIVFADADFETAVDQALNG 268
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFN GQ C AGSR V ES++D+FV A K +G+ + GP + +E EK+
Sbjct: 269 VFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKV 328
Query: 181 LKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
L YI+ G + GA+L GG+R AKGY+++PT+F V M I ++EIFGPV ++ +
Sbjct: 329 LSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVER 388
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 296
+ +E I+ +N + YGLA V+T ++ AN + R LR G+VWIN + + A P+GGYK
Sbjct: 389 FDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYK 448
Query: 297 QSGQGREKGSYSLSNYLQVKAVVTALK 323
QSG GRE G L Y + K + L
Sbjct: 449 QSGIGRELGPTGLEEYQETKHININLS 475
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 373 bits (961), Expect = e-128
Identities = 153/325 (47%), Positives = 208/325 (64%), Gaps = 11/325 (3%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GNT+VLK A QTPLS L + +L+ + LP GV+N+V+G+G AG LA
Sbjct: 152 MAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLA 210
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-----DVDKAAE 115
SH + KLAFTGSTT G++++Q AA+ NL PVTLELGGKSP I +DA D D AE
Sbjct: 211 SHPRIAKLAFTGSTTVGRLIMQYAAE-NLIPVTLELGGKSPNIFFDDAMDADDDFDDKAE 269
Query: 116 LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 175
FNQG+ C SR V ES+YD+F+E+A VG+P G Q+ +
Sbjct: 270 EGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKD 329
Query: 176 QFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPV 231
Q EKIL Y+ G + GA++ TGGERL KGY+ +PT+ G +DM I ++EIFGPV
Sbjct: 330 QLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPV 389
Query: 232 QSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIP 291
+++ +KD +E I +N ++YGL GV+T +++ A + R ++ G VW+NC+ + A P
Sbjct: 390 LAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAP 449
Query: 292 FGGYKQSGQGREKGSYSLSNYLQVK 316
FGGYK+SG GRE L +Y Q K
Sbjct: 450 FGGYKKSGIGRETHKMMLDHYQQTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 372 bits (958), Expect = e-128
Identities = 154/321 (47%), Positives = 204/321 (63%), Gaps = 7/321 (2%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
+WK PALACGN +V K + TPL+AL ++++L EAGLP GV N+V G G T G L H
Sbjct: 134 SWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGGET-GQLLCEH 192
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
+V K++FTGS TGK V+ AAK +K VTLELGGKSP I+ +DAD++ A A A F
Sbjct: 193 PDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANF 251
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
+QGQ C G+R FV S+ D+F E+ K +GDP Q G I E EK+L
Sbjct: 252 LSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLG 311
Query: 183 YIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237
YI S GAK+ GGER+ G+Y+ P V T DDM I ++EIFGPV SIL +
Sbjct: 312 YIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPF 371
Query: 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ 297
+EVI+R+N + YGLAAGVFT +L A+ ++ L+ G+ WIN +++ +PFGGYKQ
Sbjct: 372 DTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQ 431
Query: 298 SGQGREKGSYSLSNYLQVKAV 318
SG GRE G+ +L +Y Q+K V
Sbjct: 432 SGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 363 bits (934), Expect = e-124
Identities = 158/322 (49%), Positives = 210/322 (65%), Gaps = 3/322 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWKV PALA G T+VLK +E T L+ L ++++ EAGLPPGVLN+V+G G AGA LA
Sbjct: 136 MAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLA 195
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +DK++FTGST TG V+Q AA+ ++KPV+LELGGKSP IV +DAD++KA E A +
Sbjct: 196 AHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPIIVFDDADLEKAVEWAMFG 254
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F+N GQ C A SR VHES+ D F+E+ A VGDP + G++ GP + Q+EK+
Sbjct: 255 CFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKV 314
Query: 181 LKYIRSGVDGGAKLETGGER--LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
L +I G + GA+L GG R KGY+I PTVF V D I ++EIFGPV + +
Sbjct: 315 LSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFA 374
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
DE I +N S+YGLAA V + + + + + AL G VWINC P+GGYK+S
Sbjct: 375 TEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRS 434
Query: 299 GQGREKGSYSLSNYLQVKAVVT 320
G GRE G + L NYL+VK +
Sbjct: 435 GIGRELGEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 361 bits (930), Expect = e-123
Identities = 142/319 (44%), Positives = 191/319 (59%), Gaps = 3/319 (0%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
K+ PALA GNT+VLK A TPLSAL + +++ E LP GV+N+V+G G AL +
Sbjct: 141 LAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTD 200
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
VD ++FTGST G+ ++ AA + LK V LELGGKS IV +DAD+ AA A
Sbjct: 201 PRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCM 259
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
N GQ C +R V S YD+ VE A VGDP G GP I + Q +++
Sbjct: 260 HNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEG 319
Query: 183 YIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
YI G D GA+L TGG R KG+Y++PT+F V +DM IA++EIFGPV ++ Y D
Sbjct: 320 YIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDD 379
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DE ++ +N S YGL+ GV++ ++D A + R +R GSV IN + PFGGYKQSG
Sbjct: 380 DEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGL 439
Query: 301 GREKGSYSLSNYLQVKAVV 319
GRE G L +L+ K++
Sbjct: 440 GRENGIEGLEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 357 bits (917), Expect = e-121
Identities = 151/311 (48%), Positives = 205/311 (65%), Gaps = 2/311 (0%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
ALA G T+V+K +E T + L +++LL EAGLP GV+NIV+GYG T G A+ H +VD +
Sbjct: 143 ALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMV 202
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 128
+FTGST GK + AA+ NLK V+LELGGK+P IV DAD+D AA+ + ++FN G+C
Sbjct: 203 SFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGEC 261
Query: 129 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 188
C +GSR VHES+ D FV A + K VGDP + G I+ Q KI Y+ +G
Sbjct: 262 CNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGR 321
Query: 189 DGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 247
GA L GGERL A G + +PT+FT V DM IA++EIFGPV S+L + +DE I +
Sbjct: 322 AEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALA 381
Query: 248 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSY 307
N + YGL+AGV++ ++DTA T+ R +R G+VW+N F +PFGG+KQSG GRE G Y
Sbjct: 382 NDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRY 441
Query: 308 SLSNYLQVKAV 318
+ Y ++K V
Sbjct: 442 GVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 351 bits (903), Expect = e-119
Identities = 139/325 (42%), Positives = 193/325 (59%), Gaps = 10/325 (3%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ V PALA GN +V+K AE PL+AL +++L EAGLP G LN+V+G G AGAAL
Sbjct: 133 ITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALV 192
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H VD ++FTGS TG V++ AA+ N+ PVTLELGGKSP IV DAD++ A + A
Sbjct: 193 AHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVFADADLEAALPVVVNA 251
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ N GQ C AGSR VH S+YD+ +E+ VG P GP I ++Q +++
Sbjct: 252 IIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG-PGLEDPDLGPLISAKQLDRV 310
Query: 181 LKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237
++ GA++ GG A GY++ PT+ V D +A++EIFGPV +++ +
Sbjct: 311 EGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPF 370
Query: 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA---IPFGG 294
D E I +N + YGL AGV+T + D A + R LR G V++N + +PFGG
Sbjct: 371 DDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNY--GAGGGIELPFGG 428
Query: 295 YKQSGQGREKGSYSLSNYLQVKAVV 319
K+SG GREKG +L NY Q K V
Sbjct: 429 VKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 343 bits (881), Expect = e-117
Identities = 144/320 (45%), Positives = 181/320 (56%), Gaps = 62/320 (19%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ AWK+ PALA GNT+VLK +E TPL+AL +++LL EAGLPPGV+N+V G G GAAL
Sbjct: 108 LAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALL 167
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH VDK++FTGST GK +++ AA+ NLKPVTLELGGKSP IV EDAD+D A E A +
Sbjct: 168 SHPRVDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFG 226
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
FFN GQ C A SR VHES+Y D F
Sbjct: 227 AFFNAGQICTAASRLLVHESIY-----------------DEFV----------------- 252
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
E+L TV V DM IA++EIFGPV ++++KD
Sbjct: 253 ------------------EKLV--------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDE 286
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSG 299
+E I +N ++YGL AGVFT +L+ A + LR G+V+IN + PFGG K SG
Sbjct: 287 EEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSG 346
Query: 300 QGREKGSYSLSNYLQVKAVV 319
GRE G Y L Y + K VV
Sbjct: 347 IGREGGPYGLEEYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 346 bits (889), Expect = e-117
Identities = 154/326 (47%), Positives = 208/326 (63%), Gaps = 6/326 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GNT+V+K + T LS L ++K++ + LP GV+NIV+G G +G L
Sbjct: 152 MAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLL 210
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +DKLAFTGST G+ V AAK L P TLELGGKS I+ +DA+ DKA E A
Sbjct: 211 NHPGLDKLAFTGSTEVGRDVAIAAAK-KLIPATLELGGKSANIIFDDANWDKALEGAQLG 269
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ FNQGQ CCAGSR FV E +YD+FV K VG+P Q G Q++ +Q +KI
Sbjct: 270 ILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKI 329
Query: 181 LKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
L Y+ + GAK+ TGG RL KG++I+PT+ V +DM +A++EIFGPV +++K
Sbjct: 330 LSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIK 389
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 296
+K DEVI +N S+YGL GVFT +++ A + RA+ G VW+N ++ A PFGGYK
Sbjct: 390 FKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYK 449
Query: 297 QSGQGREKGSYSLSNYLQVKAVVTAL 322
+SG GRE L Y Q+K + L
Sbjct: 450 KSGIGRETHKSMLDAYTQMKNIYIDL 475
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 340 bits (874), Expect = e-115
Identities = 138/320 (43%), Positives = 192/320 (60%), Gaps = 3/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GNT+VLK +E TPL+ L +++L E LPPGV+N+V G G +AG AL
Sbjct: 134 MAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALV 192
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H V ++ TGS TGK V + AA LK V LELGGK+P IV +DAD+D A A
Sbjct: 193 AHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVFDDADLDAAVAGIATA 251
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
++N GQ C A R +VHESVYD+FV VGDP + GP + Q E++
Sbjct: 252 GYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERV 311
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
++ A++ TGG R GY+ +PTV GV D I ++EIFGPV ++ + D
Sbjct: 312 AGFV-ERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDE 370
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DE I+ +N +YGLA+ V+T ++ A L L G+VW+N A +P GG+KQSG
Sbjct: 371 DEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGY 430
Query: 301 GREKGSYSLSNYLQVKAVVT 320
G++ Y+L +Y ++K V+
Sbjct: 431 GKDLSIYALEDYTRIKHVMV 450
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 337 bits (866), Expect = e-114
Identities = 135/316 (42%), Positives = 186/316 (58%), Gaps = 6/316 (1%)
Query: 5 KVGPALACGNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
V PALA GN +VLK +TP++ L ++++ EAGLP GVLN+V G G G AL H
Sbjct: 118 SVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHP 177
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
V ++FTGST G+ + +LA + +LK V LELGG +P IV +DAD+D A A + F
Sbjct: 178 RVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+QGQ C A R VHESVYD+FVEK A A VGDP GP I+ Q +++
Sbjct: 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAI 296
Query: 184 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
+ V GA+L TGG +G + +PTV + V DM I ++EIFGPV ++ + D +E
Sbjct: 297 VEDAVAAGARLLTGGT---YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEA 353
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGR 302
++ +N ++YGL+A VFT +L+ A L G V IN V D +PFGG K SG GR
Sbjct: 354 VELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGR 413
Query: 303 EKGSYSLSNYLQVKAV 318
G SL + + + +
Sbjct: 414 FGGPASLEEFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 337 bits (867), Expect = e-114
Identities = 146/318 (45%), Positives = 206/318 (64%), Gaps = 5/318 (1%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
+WK+ PALA GN +V K +E TPL+AL V++++ EAGLP GV N+V G G G L +H
Sbjct: 151 SWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNH 210
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
+V K++FTG TGK ++ AA +LK VT+ELGGKSP IV +DAD++ A + A F
Sbjct: 211 PDVAKVSFTGGVPTGKKIMA-AAAGHLKHVTMELGGKSPLIVFDDADLESAVDGAMLGNF 269
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
F+ GQ C G+R FVH+ + ++F+ + + +GDPF + GP I + +K+L
Sbjct: 270 FSAGQVCSNGTRVFVHKKIKERFLARLVERTERIKLGDPFDEATEMGPLISAAHRDKVLS 329
Query: 183 YIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
YI G GA L TGG R G++++PTVF DDM I ++EIFGPV ++L +
Sbjct: 330 YIEKGKAEGATLATGGGRPENVGLQNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFS 389
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
D DEVI R+N ++YGLA GVFT +L A+ + L G+VWIN ++++ A PFGGYKQS
Sbjct: 390 DEDEVIARANDTEYGLAGGVFTADLGRAHRVADQLEAGTVWINTYNLYPAEAPFGGYKQS 449
Query: 299 GQGREKGSYSLSNYLQVK 316
G GRE G +L++Y +VK
Sbjct: 450 GIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 336 bits (863), Expect = e-113
Identities = 149/317 (47%), Positives = 187/317 (58%), Gaps = 5/317 (1%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
AWK+ PAL GNT+VLK + TPL L + +L E LPPGVLN+VSG G G AL SH
Sbjct: 132 AWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSH 189
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE-LAHYAL 121
++ K++FTGST TGK V+ AAK LK VTLELGG IV D D+D A L A
Sbjct: 190 PDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGA- 247
Query: 122 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 181
F N GQ C A R +VHES+YD+F E ALA VVGD G GP + Q++K+
Sbjct: 248 FINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVK 307
Query: 182 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241
+ + GAK+ GGE L GY+I PT+ + I +E FGPV +LKY D D
Sbjct: 308 ELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDED 367
Query: 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 301
EVI R+N S+YGL A V++ +L+ A + R L G+VWIN D PFGG+KQSG G
Sbjct: 368 EVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIG 427
Query: 302 REKGSYSLSNYLQVKAV 318
E G L Y Q + +
Sbjct: 428 VEFGIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 337 bits (867), Expect = e-113
Identities = 147/329 (44%), Positives = 201/329 (61%), Gaps = 3/329 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M WKV PALA G T VLK +E ++ L ++ + E GLPPGVLN+V+G G AGA LA
Sbjct: 167 MATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLA 226
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH VDK+AFTGST TG+ ++ AA+ +KPV+LELGGKSP IV +D D+DKA E A +
Sbjct: 227 SHPGVDKIAFTGSTATGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFG 285
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F+ GQ C A SR VHE + +F+EK A + DP + G + GP + Q+EK+
Sbjct: 286 CFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKV 345
Query: 181 LKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
LK+I + GA + GG+R KG++I+PT+ T V M I ++E+FGPV + +
Sbjct: 346 LKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFS 405
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
DE I+ +N S YGLA V +++L+ + A + G VWINC P+GG K+S
Sbjct: 406 TEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRS 465
Query: 299 GQGREKGSYSLSNYLQVKAVVTALKNPAW 327
G GRE G + L NYL VK V + + W
Sbjct: 466 GFGRELGEWGLENYLSVKQVTKYISDEPW 494
|
Length = 503 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 335 bits (861), Expect = e-113
Identities = 140/321 (43%), Positives = 199/321 (61%), Gaps = 4/321 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A K+ PAL GNTIV+K +E+TPL+AL ++L+ EAGLP GVLNIV+G G G AL
Sbjct: 149 LIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALV 208
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +V ++ TGST G+ +++ AA+ N+ V+LELGGK+P IV +DAD+D A + +
Sbjct: 209 AHPKVGMISLTGSTEAGQKIMEAAAE-NITKVSLELGGKAPAIVMKDADLDLAVKAIVDS 267
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
N GQ C R +VHE +YD+F+EK VGDPF GP ++ +K+
Sbjct: 268 RIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKV 327
Query: 181 LKYIRSGVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
+ + V+ GA L TGG+R G KGY+ +PTV T V+ DM I ++EIFGPV ++K+
Sbjct: 328 EEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSS 387
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPF-GGYKQS 298
LDE I+ +N S+YGL + ++T NL+TA L G +IN + F+A F G+K+S
Sbjct: 388 LDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINREN-FEAMQGFHAGWKKS 446
Query: 299 GQGREKGSYSLSNYLQVKAVV 319
G G G + L YLQ K V
Sbjct: 447 GLGGADGKHGLEEYLQTKVVY 467
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 334 bits (857), Expect = e-112
Identities = 145/320 (45%), Positives = 207/320 (64%), Gaps = 2/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ LA GNT+VLK A+ TPL+AL ++L +AG P GV+NI+ G G G L+
Sbjct: 163 MLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLS 222
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V KL FTGST GK +++ A SNLK V+LELGGKSP I+ D D+DKA + +
Sbjct: 223 DHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSS 282
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFN+G+ C A R FV ES++D+FV + K +GDP GPQ +K+
Sbjct: 283 VFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKL 342
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK-- 238
++Y GV GA L GG+++ G++ +PTVFT V+D M IAK+E FGP+ I K+
Sbjct: 343 VEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDG 402
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
D+D V+QR+N ++YGLA+GVFT +++ A + L G+V++N ++ D A PFGG+KQS
Sbjct: 403 DVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQS 462
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G G++ G +L+ YL+ K V
Sbjct: 463 GFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 332 bits (853), Expect = e-111
Identities = 141/320 (44%), Positives = 190/320 (59%), Gaps = 5/320 (1%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
AWK+ PALA GNT+V K AE TP SA + ++L EAGLP GV N+V G G G AL H
Sbjct: 153 AWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEH 212
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
+VD ++FTGST G+ + AA + V LE+GGK+P +V +DAD+D A E A F
Sbjct: 213 PDVDAVSFTGSTAVGRRIAAAAA-ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAF 271
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
F+ GQ C A SR V E ++D+FVE VGD G+ GP + Q EK L+
Sbjct: 272 FSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLR 331
Query: 183 YIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
YI GAKL GGERL +GYY+ P +F GV +DM IA++EIFGPV ++++ +D
Sbjct: 332 YIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDY 391
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSG 299
DE + +N +++GL+AG+ T +L A R + G V +N D +PFGG K S
Sbjct: 392 DEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSS 451
Query: 300 QG-REKGSYSLSNYLQVKAV 318
G RE+G +L Y +K V
Sbjct: 452 YGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 329 bits (845), Expect = e-111
Identities = 146/320 (45%), Positives = 192/320 (60%), Gaps = 11/320 (3%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
A KVGPA+A GN +VLK A QTPLSAL +++LL EAGLP G LN+V+G G T G AL +
Sbjct: 141 AHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTD 200
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
V ++FTGS G+ +A K+ LK VTLELG + IV DAD++KA E F
Sbjct: 201 PRVRMISFTGSPAVGEA---IARKAGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAF 257
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
N GQ C + R FVHE +YD+F+E+ A K VVGDP GP I + E+I +
Sbjct: 258 ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEE 317
Query: 183 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 242
++ V+GGA+L TGG+R GA ++PTV T V DM + +E+F PV S+ + LDE
Sbjct: 318 WVEEAVEGGARLLTGGKRDGA---ILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDE 374
Query: 243 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA---AIPFGGYKQSG 299
I +N S YGL AGVFT++L A R L VG V IN D +P+GG K+SG
Sbjct: 375 AIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMIN--DSSTFRVDHMPYGGVKESG 432
Query: 300 QGREKGSYSLSNYLQVKAVV 319
GRE Y++ ++K V
Sbjct: 433 TGREGPRYAIEEMTEIKLVC 452
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 329 bits (846), Expect = e-110
Identities = 136/321 (42%), Positives = 188/321 (58%), Gaps = 5/321 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A K+ PALA G T+VLK + +TPL A +++ EAGLPPGV+N+V G L
Sbjct: 153 LAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLV 211
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H VDK++FTGST G+ + + L VTLELGGKS IV +DAD+D A A
Sbjct: 212 RHPGVDKVSFTGSTAAGRRIAAVCG-ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPA 270
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
N GQ C A +R V S YD+ VE A VGDP Q GP + Q E++
Sbjct: 271 SLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERV 330
Query: 181 LKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
YI G GA+L TGG R +G++++PT+F V +DM IA++EIFGPV S++ Y
Sbjct: 331 EGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYD 390
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
D D+ ++ +N S YGL+ V+T +++ + R +R G+V +N F + D PFGG+KQS
Sbjct: 391 DEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFRL-DFGAPFGGFKQS 449
Query: 299 GQGREKGSYSLSNYLQVKAVV 319
G GRE G L YL+ K++
Sbjct: 450 GIGREGGPEGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 327 bits (841), Expect = e-110
Identities = 130/319 (40%), Positives = 187/319 (58%), Gaps = 3/319 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GNT+VLK +E TPL+AL +++L + LPPGVLN+V+G G T G AL
Sbjct: 154 MAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALV 212
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V ++ TGS TGK VL AA S +K LELGGK+P IV +DAD+D E
Sbjct: 213 GHPKVRMVSLTGSIATGKHVLSAAADS-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTF 271
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
++N GQ C A R + +YD V K A VGDP + GP I + +++
Sbjct: 272 GYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRV 331
Query: 181 LKYI-RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
++ R+ G ++ TGGE KGYY +PT+ G + D I + E+FGPV S+ + D
Sbjct: 332 AGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDD 391
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
D+ ++ +N S YGLA+ V+T ++ A+ + L+ G W+N + + +P GG KQSG
Sbjct: 392 EDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSG 451
Query: 300 QGREKGSYSLSNYLQVKAV 318
G++ Y L +Y V+ V
Sbjct: 452 YGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 320 bits (822), Expect = e-107
Identities = 139/324 (42%), Positives = 195/324 (60%), Gaps = 8/324 (2%)
Query: 1 MF-AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 59
MF A K+ LA GNT+V+K EQ PLSAL +++L E LPPGV NI+ G G TAGAAL
Sbjct: 131 MFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAAL 189
Query: 60 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 119
H +V ++A GS TG+ +++ AA+ +K VTLELGGK+ IV DAD + AA+ A
Sbjct: 190 VRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVFPDADPEAAADAAVA 248
Query: 120 ALFFN-QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 178
+ F GQ C + SR FVHES+YD+ + + VGDP GP + +Q++
Sbjct: 249 GMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYD 308
Query: 179 KILKYIRSGVDGGAKLETGGER----LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 234
+++ YI S GA+L TGG R G+Y++PTVF V M IA++EIFGPV S+
Sbjct: 309 RVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSV 368
Query: 235 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGG 294
L+++D E++ ++N +YGL A ++T+++ A+ R + G VWIN PFGG
Sbjct: 369 LRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGG 428
Query: 295 YKQSGQGREKGSYSLSNYLQVKAV 318
K SG GRE+ L +Y Q K V
Sbjct: 429 VKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 319 bits (819), Expect = e-106
Identities = 150/313 (47%), Positives = 199/313 (63%), Gaps = 2/313 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GNT+VLK AE TPL+AL +++ EAGLPPGVLNIV+G G G+ALA
Sbjct: 163 MLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSF-GSALA 221
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H VDK+AFTGST G+ + + A + K ++LELGGKSPFIV +DAD+D A E A
Sbjct: 222 NHPGVDKVAFTGSTEVGRALRRATAGTG-KKLSLELGGKSPFIVFDDADLDSAVEGIVDA 280
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
++FNQGQ CCAGSR V ESV ++ + K VGDP I G +D Q ++I
Sbjct: 281 IWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRI 340
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+ + G GA + G L +KG + PT+FT V IA++EIFGPV +L ++
Sbjct: 341 RELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTA 400
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
E + +N + YGLAA V++ NL A + +L+ G VWIN ++FDAA FGGY++SG
Sbjct: 401 KEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGF 460
Query: 301 GREKGSYSLSNYL 313
GRE G L YL
Sbjct: 461 GREGGKEGLYEYL 473
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 314 bits (806), Expect = e-104
Identities = 147/332 (44%), Positives = 202/332 (60%), Gaps = 16/332 (4%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M WK+ PALA GN +VLK AEQTP S L + +L+ + LPPGV+N+V+G+G AG LA
Sbjct: 152 MATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLA 210
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE------DADVDKAA 114
S + K+AFTG TTTG++++Q A++ N+ PVTLELGGKSP I DA DKA
Sbjct: 211 SSKRIAKVAFTGETTTGRLIMQYASE-NIIPVTLELGGKSPNIFFADVMDADDAFFDKAL 269
Query: 115 ELAHYALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQID 173
E + +F NQG+ C SR + ES+YD+F+E+A G+P G Q
Sbjct: 270 E--GFVMFALNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQAS 327
Query: 174 SEQFEKILKYIRSGVDGGAKLETGGER----LGAKGYYIKPTVFTGVKDDMLIAKDEIFG 229
EQ EKIL YI G + GA++ TGGER G Y PT F G + M I ++EIFG
Sbjct: 328 LEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFG 386
Query: 230 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA 289
PV ++ +KD +E ++ +N + YGL AGV+T + +TA + R ++ G VW NC+ ++ A
Sbjct: 387 PVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAH 446
Query: 290 IPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321
FGGYKQSG GRE L +Y Q K ++ +
Sbjct: 447 AAFGGYKQSGIGRENHKMMLDHYQQTKNLLVS 478
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 309 bits (793), Expect = e-103
Identities = 150/327 (45%), Positives = 195/327 (59%), Gaps = 15/327 (4%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
A K+ PAL GNT+VLK AE PL+ L ++++L + LP GVLN+++GYG GAAL H
Sbjct: 135 ALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDH 193
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL- 121
+VDK+ FTGST GKI+ + AA L PV+LELGGKSP IV DAD+D A + A +
Sbjct: 194 PDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMR 252
Query: 122 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 181
F QGQ C AGSR FVHE +YD F+EK A K +GDP G I +QF K+
Sbjct: 253 FTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVC 312
Query: 182 KYIRSGVDG-GAKLETGG----ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
YI G+ GA + GG E A G++++PT+F+GV ++ +A++EIFGPV +
Sbjct: 313 GYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIP 372
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 296
+KD DEVI +N S YGLAA V+T +L A AL G V +N +GG+K
Sbjct: 373 WKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFK 432
Query: 297 QSGQGREKGSYSLSNYL----QVKAVV 319
QSG GRE SL L Q K V
Sbjct: 433 QSGLGRE---ASLEGMLEHFTQKKTVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 306 bits (785), Expect = e-101
Identities = 144/321 (44%), Positives = 202/321 (62%), Gaps = 7/321 (2%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK+ PAL CGNT+V K AE TP AL + +L EAGLPPGV+N+V G G G AL H
Sbjct: 154 WKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHP 213
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
+VD ++FTGST G+ + + A+ N K V LE+GGK+P IV +DAD+D A E A ++ F
Sbjct: 214 DVDVVSFTGSTEVGERIGETCARPN-KRVALEMGGKNPIIVMDDADLDLALEGALWSAFG 272
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
GQ C A SR VHESVYD+F+++ A + VGD GP I+ Q EK+L Y
Sbjct: 273 TTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNY 332
Query: 184 IRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
G + GA L GGERL KGY+++PTVFT V DM IA++EIFGPV ++++
Sbjct: 333 NEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSS 392
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQS 298
L+E I+ +N ++YGL++ ++T +++ A R L G ++N + + +PFGG K+S
Sbjct: 393 LEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKS 452
Query: 299 GQG-REKGSYSLSNYLQVKAV 318
G G RE G+ +L + + KAV
Sbjct: 453 GNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 304 bits (781), Expect = e-101
Identities = 137/315 (43%), Positives = 190/315 (60%), Gaps = 5/315 (1%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
KV ALA GNT+VLK +E+TP+ L +++++ EAGLP GV N+V+G G G L
Sbjct: 139 KVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPR 198
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
V + FTGST G+ + + A + +LK +TLELGGK+P IV DAD+D A A + F +
Sbjct: 199 VRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMH 257
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
QGQ C + SR V E VYD+FV+K A A K VGDP GP I Q E+I + +
Sbjct: 258 QGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQV 317
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
V GAKL TGG+ G + +PTV T V DM I ++E FGPV S++ KD +E +
Sbjct: 318 EDAVAKGAKLLTGGKYDGN---FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEAL 374
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGRE 303
+ +N ++YGL+A + T++L A L L G V IN + D A +PFGG K SG GRE
Sbjct: 375 ELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGRE 434
Query: 304 KGSYSLSNYLQVKAV 318
G +S+ + ++K +
Sbjct: 435 GGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 305 bits (782), Expect = e-101
Identities = 139/329 (42%), Positives = 200/329 (60%), Gaps = 8/329 (2%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK+ PALA GNT+VLK AE +PL+A ++++ EAGLP GV N+V G+G AG AL +H
Sbjct: 154 WKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHP 213
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
+V ++FTG T TG I+++ A + LK ++ELGGKSP IV +DAD+++A + + +F
Sbjct: 214 DVKAVSFTGETATGSIIMRNGADT-LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFS 272
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
G+ C A SR V ES+ + FVEK VG P + GP I E K+L Y
Sbjct: 273 FNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGY 332
Query: 184 IRSGVDGGAKLETGGERLGA-------KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
+ + GA + GGER +G Y+ PTVFTG + M IA++EIFGPV +++
Sbjct: 333 VEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIP 392
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 296
+KD +E I+++N ++YGLA V+T+++ A+ + AL G +W+N +V PFGG K
Sbjct: 393 FKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVK 452
Query: 297 QSGQGREKGSYSLSNYLQVKAVVTALKNP 325
SG GRE G+YS Y + K V AL
Sbjct: 453 ASGIGREGGTYSFDFYTETKNVALALGPH 481
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 299 bits (768), Expect = 3e-99
Identities = 136/317 (42%), Positives = 197/317 (62%), Gaps = 2/317 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG-YGPTAGAAL 59
M K G ALA G T+V+K AEQTPLSAL +++L +AG+P GVLN+++G G L
Sbjct: 133 MITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGNVL 192
Query: 60 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 119
+ V K++FTGST GKI+++ +A + +K V++ELGG +PFIV +DAD+D+A E A
Sbjct: 193 TTSPLVRKISFTGSTNVGKILMKQSAST-VKKVSMELGGNAPFIVFDDADLDQAVEGAMA 251
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
+ F N GQ C +R +VH+ +YD+F +K K VG+ G+ QGP I+ + EK
Sbjct: 252 SKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEK 311
Query: 180 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
+ K+I V+ GAK+ TGG+R G + +PTV + V DML++K+E FGP+ + K+ D
Sbjct: 312 VEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDD 371
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
+EVI +N ++ GLAA F+ +L + AL G V IN + + PFGG KQSG
Sbjct: 372 EEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSG 431
Query: 300 QGREKGSYSLSNYLQVK 316
GRE Y + YL+ K
Sbjct: 432 LGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 299 bits (767), Expect = 2e-98
Identities = 134/320 (41%), Positives = 184/320 (57%), Gaps = 11/320 (3%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
AL GNT+VLK AE TP+ A + ++L EAGLPPGV+N + G G G L H +V +
Sbjct: 190 ALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFI 249
Query: 69 AFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
AFTGS G + + AAK LK V E+GGK+ IV EDAD+D+AAE + F
Sbjct: 250 AFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFG 309
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
QGQ C A SR VHESVYD+F+E+ VGDP + GP ID ++I +Y
Sbjct: 310 FQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRY 369
Query: 184 IRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241
I G G +L GGE L A+GY+++PT+F V D +A++EIFGPV +++K KD D
Sbjct: 370 IEIGKSEG-RLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFD 428
Query: 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSG 299
E ++ +N ++YGL GVF+ + + R VG+++ N PFGG+K SG
Sbjct: 429 EALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSG 488
Query: 300 QG-REKGSYSLSNYLQVKAV 318
G + G L ++Q K V
Sbjct: 489 TGSKAGGPDYLLQFMQPKTV 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 294 bits (755), Expect = 9e-97
Identities = 139/318 (43%), Positives = 196/318 (61%), Gaps = 1/318 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M KVGPALA G T+V+K +E TPL+AL ++L +AG+PPGVLN+V G P G AL
Sbjct: 176 MITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALL 235
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ +V K+ FTGST GK ++ AA + +K V+LELGG +PFIV +DAD+D A + A +
Sbjct: 236 ASPKVRKITFTGSTAVGKKLMAGAAAT-VKRVSLELGGNAPFIVFDDADLDVAVKGALAS 294
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F N GQ C +R V E +YD+F E + K VVGD F+ G+ QGP I+ +K+
Sbjct: 295 KFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKV 354
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+++ V GAK+ GG+R G + +PTV V +DMLI ++E+FGPV + ++K
Sbjct: 355 ESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTE 414
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+E I +N ++ GLAA +FT +L A + AL G V +N + PFGG KQSG
Sbjct: 415 EEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGL 474
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE Y + YL++K V
Sbjct: 475 GREGSKYGIDEYLEIKYV 492
|
Length = 498 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 290 bits (746), Expect = 4e-96
Identities = 121/315 (38%), Positives = 163/315 (51%), Gaps = 4/315 (1%)
Query: 7 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL-NIVSGYGPTAGAALASHMEV 65
P L GNT++LK A P AL + +L EAG P GV N++ A+ + V
Sbjct: 118 APNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVE--AIIADPRV 175
Query: 66 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 125
+ TGS G+ V A K NLK LELGG PFIV +DAD+DKA + A N
Sbjct: 176 RGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234
Query: 126 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 185
GQ C A R VHE VYD+F+EK VGDP GP + +++ + +
Sbjct: 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVE 294
Query: 186 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 245
V GA L GG+R G + PTV T V M +E+FGPV +++K KD +E I
Sbjct: 295 EAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIA 354
Query: 246 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 305
+N S +GL VFT +L+ A + R L G V+IN D +PFGG K+SG GRE G
Sbjct: 355 LANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELG 414
Query: 306 SYSLSNYLQVKAVVT 320
+ + ++ +K V
Sbjct: 415 RFGIREFVNIKTVWV 429
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 289 bits (741), Expect = 4e-95
Identities = 134/317 (42%), Positives = 180/317 (56%), Gaps = 5/317 (1%)
Query: 6 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 65
+ PALA GN +VLK +E TPL +++ AG P GVL +V+G G T GAAL V
Sbjct: 140 IIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDGAT-GAALIDA-GV 197
Query: 66 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 125
DK+AFTGS TG+ V+ AA+ L PV LELGGK P IV DAD+++AA A + N
Sbjct: 198 DKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNA 256
Query: 126 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 185
GQ C + R +VHESVYD+FV + A A G G GP + Q + + +++
Sbjct: 257 GQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVD 316
Query: 186 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 245
V GAK TGG R G + +PTV T V DM + ++E FGPV ++ D DE I
Sbjct: 317 DAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIA 376
Query: 246 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA--AIPFGGYKQSGQGRE 303
+N S+YGL+A VF+ +L A + R L G+V IN + A+PFGG K SG GR
Sbjct: 377 LANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRR 436
Query: 304 KGSYSLSNYLQVKAVVT 320
G+ L + + KA+
Sbjct: 437 HGAEGLREFCRPKAIAR 453
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 287 bits (737), Expect = 2e-94
Identities = 135/315 (42%), Positives = 183/315 (58%), Gaps = 6/315 (1%)
Query: 6 VGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
V PALA GN +VLK A TP++ L ++K+ EAGLP GVLN+V G G G A H
Sbjct: 151 VAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPV 210
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
++FTGST G+ + +LA + +LK V LELGG +PF+V EDAD+D A A + F +
Sbjct: 211 PRLISFTGSTPVGRHIGELAGR-HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLH 269
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
QGQ C A +R VHE VYD+FVEK GDP GP I+ Q + +L I
Sbjct: 270 QGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKI 329
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
V+ GA L GGE A+G ++PTV + V +DM IA++EIFGPV I+K D +E +
Sbjct: 330 EQAVEEGATLLVGGE---AEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEAL 386
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGRE 303
+ +N ++YGL+ VFT +L+ R + G IN V D +PFGG K SG GR
Sbjct: 387 ELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRF 446
Query: 304 KGSYSLSNYLQVKAV 318
G ++L + K +
Sbjct: 447 NGEWALEEFTTDKWI 461
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 288 bits (738), Expect = 2e-94
Identities = 130/326 (39%), Positives = 186/326 (57%), Gaps = 11/326 (3%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAAL 59
+ WKVGPALACGNT+V+K +E+TP +A + ++++ G+P GV N+V G+GP +AG L
Sbjct: 155 LMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFL 214
Query: 60 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 119
H VD + FTG T TG +++ AA +KPV+ ELGGK+ IV D D D A
Sbjct: 215 TRHPGVDAITFTGETRTGSAIMKAAADG-VKPVSFELGGKNAAIVFADCDFDAAVAGILR 273
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
+ F N GQ C R +V ++D+FV A A +G P GP I +E +K
Sbjct: 274 SAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDK 333
Query: 180 ILKYIRSGVDGGAKLETGG-------ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 232
+L Y V+ GA + TGG A G +++PT++TG+ D + +EIFGP
Sbjct: 334 VLSYYALAVEEGATVVTGGGVPDFGDAL--AGGAWVQPTIWTGLPDSARVVTEEIFGPCC 391
Query: 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPF 292
I + +EVI +N + YGLAA V+T +L A+ + R + VG VW+N + + D PF
Sbjct: 392 HIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPF 451
Query: 293 GGYKQSGQGREKGSYSLSNYLQVKAV 318
GG K SG GRE G +SL Y ++ V
Sbjct: 452 GGSKLSGIGREGGVHSLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 286 bits (734), Expect = 2e-94
Identities = 127/315 (40%), Positives = 180/315 (57%), Gaps = 11/315 (3%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALASHMEV 65
LA GNT+VLK +E +P + + ++ HEAGLP GVLN+V+ P AL +H V
Sbjct: 122 PLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAV 181
Query: 66 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 125
K+ FTGST G+I+ + AAK +LKPV LELGGK+P IV EDAD+D AA A + F N
Sbjct: 182 RKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS 240
Query: 126 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 185
GQ C + R VHES+ D+FVEK +K F G + G + + +++ + +
Sbjct: 241 GQICMSTERIIVHESIADEFVEK-----LKAAAEKLFAGPVVLGSLVSAAAADRVKELVD 295
Query: 186 SGVDGGAKLETGG-ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
+ GAKL GG G + PT+ V DM I +E FGPV SI++ KD +E +
Sbjct: 296 DALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAV 355
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGRE 303
+ +N S+YGL+A VFT +L A + + + G+V IN V D +P GG K SG GR
Sbjct: 356 RIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRF 415
Query: 304 KGSYSLSNYLQVKAV 318
G + + + + K +
Sbjct: 416 NGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 286 bits (732), Expect = 2e-93
Identities = 133/321 (41%), Positives = 197/321 (61%), Gaps = 3/321 (0%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK+GPALA GN+++LK +E++PLSA+ ++ L EAGLP GVLN+V+G+G AG AL+ H
Sbjct: 176 WKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHN 235
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALF 122
++D +AFTGST TGK +L+ A SN+K V LE GGKS IV D D+ +AA +F
Sbjct: 236 DIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIF 295
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
+NQGQ C AG+R + ES+ D+F+ A G P G ID + +
Sbjct: 296 YNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHS 355
Query: 183 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 242
+IR G G L G R I PT+F V + ++++EIFGPV + ++ ++
Sbjct: 356 FIREGESKGQLLLDG--RNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQ 413
Query: 243 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 302
+Q +N SQYGL A V+T +L A+ + R L+ GSV++N ++ D +PFGGYKQSG GR
Sbjct: 414 ALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGR 473
Query: 303 EKGSYSLSNYLQVKAVVTALK 323
+K ++L + ++K + +L+
Sbjct: 474 DKSLHALEKFTELKTIWISLE 494
|
Length = 494 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 284 bits (728), Expect = 8e-93
Identities = 123/327 (37%), Positives = 172/327 (52%), Gaps = 13/327 (3%)
Query: 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGA 57
W AL CGNT+V K +E TPL+A+ V+K+L E GLPPGV+N+V+G G G
Sbjct: 150 PGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGE 208
Query: 58 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 117
L V ++FTGST G+ V + A+ V LELGG + IV +DAD+D A
Sbjct: 209 LLVHDPRVPLVSFTGSTEVGRRVGETVARRF-GRVLLELGGNNAIIVMDDADLDLAVRAV 267
Query: 118 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 177
+A GQ C R VHESVYD+F+E+ + +GDP G GP I+
Sbjct: 268 LFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAV 327
Query: 178 EKILKYIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
EK L I G + TGG+R+ G G Y++PT+ TGV DD I ++E F P+ ++
Sbjct: 328 EKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVI 387
Query: 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV--GSVWINCFDVFDAAI--P 291
K+ L+E I +N GL++ +FT +L A + G V +N A I
Sbjct: 388 KFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVN-IPTSGAEIGGA 446
Query: 292 FGGYKQSGQGREKGSYSLSNYLQVKAV 318
FGG K++G GRE GS + Y++
Sbjct: 447 FGGEKETGGGRESGSDAWKQYMRRSTC 473
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 283 bits (725), Expect = 9e-93
Identities = 130/321 (40%), Positives = 191/321 (59%), Gaps = 8/321 (2%)
Query: 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 61
FA K+ PA+A GN++V+K + TPL+A+ ++K+L EAGLPPGV+N+V+GYG G + +
Sbjct: 140 FAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVT 199
Query: 62 HMEVDKLAFTGSTTTGKIVLQLAAK--SNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 119
+ +V+ ++FTGST G L +A+K K V LELGG P IV +DAD+++A +A
Sbjct: 200 NPKVNMISFTGSTAVG---LLIASKAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVR 256
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
F N GQ C A R V E VYD+F++ K VGDP GP I E E+
Sbjct: 257 GRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVER 316
Query: 180 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
+ + V+ G K+ GG+R G + PTV DM++ K+E+FGPV I K KD
Sbjct: 317 MENLVNDAVEKGGKILYGGKRDE--GSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKD 374
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQS 298
+E ++ +N+++YGL A VFT++++ A + R L G V IN F +PFGG+K+S
Sbjct: 375 DEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKS 434
Query: 299 GQGREKGSYSLSNYLQVKAVV 319
G GRE Y++ + K +V
Sbjct: 435 GIGREGVRYTMLEMTEEKTIV 455
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 281 bits (720), Expect = 8e-92
Identities = 134/315 (42%), Positives = 189/315 (60%), Gaps = 2/315 (0%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK+G ALA G TIV+K +E TPL+ L V++L EAG+P GVLN+V+G G GA L SH
Sbjct: 161 WKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHP 219
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
+V K++FTGS TGK + + AA S+L VTLELGGK+ +DAD+D E A F
Sbjct: 220 DVAKVSFTGSVATGKKIGRQAA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFL 278
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+QGQ C A R +VH S +D+ V K VG P + GP + F+K+ Y
Sbjct: 279 HQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSY 338
Query: 184 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
+ G ++ GGE L +GY+++PT+ D + ++E FGPV S + Y+D +E+
Sbjct: 339 LDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEEL 398
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 303
IQ N + +GL A V+T+NL A + + G+VW+N D A+PFGG KQSG GRE
Sbjct: 399 IQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGRE 458
Query: 304 KGSYSLSNYLQVKAV 318
GS + +Y ++K+V
Sbjct: 459 FGSAFIDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 278 bits (713), Expect = 5e-91
Identities = 124/298 (41%), Positives = 170/298 (57%), Gaps = 7/298 (2%)
Query: 6 VGPALACGNTIVLKTAEQTPLSALYV-SKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
V PALA GN +VLK +TP+S V ++L EAGLP GVL+++ G G AG AL
Sbjct: 131 VAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG-GADAGEALVEDPN 189
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
V ++FTGST G+ V + A + +LK V+LELGGK+ IV +DAD+D AA + F +
Sbjct: 190 VAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLH 248
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
QGQ C A R VHESV D + K A A VGDP G + GP I++ Q +++ +
Sbjct: 249 QGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIV 308
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
V GA+LE GG G + +PTV +GVK M +EIFGPV + + +E +
Sbjct: 309 DDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAV 365
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI-PFGGYKQSGQG 301
+N ++YGL+AG+ + ++ A L LR G + IN V D PFGG SG G
Sbjct: 366 ALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNG 423
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 275 bits (706), Expect = 5e-90
Identities = 131/321 (40%), Positives = 180/321 (56%), Gaps = 8/321 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
A K+ PA+A N IVLK +E+TPLSA+Y++ LL+EAGLPP +L++V+G G L
Sbjct: 136 QVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELI 195
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +VD + FTG GK + AA + K LELGG P IV +DAD+++AA LA
Sbjct: 196 THPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGNDPLIVMDDADLERAATLAVAG 252
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ N GQ C A R VHESV D+FV+ + VVGDP G ID E +I
Sbjct: 253 SYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI 312
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+ + GA++ G +R GA PTV V D + +E FGPV +++ KDL
Sbjct: 313 ENRVEEAIAQGARVLLGNQRQGA---LYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDL 369
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSG 299
DE I SN++ YGL++GV T++LDT L+ L VG+V +N F + PFGG K SG
Sbjct: 370 DEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSG 429
Query: 300 QG-REKGSYSLSNYLQVKAVV 319
G +E ++ VK
Sbjct: 430 LGGKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 270 bits (691), Expect = 3e-88
Identities = 123/321 (38%), Positives = 189/321 (58%), Gaps = 6/321 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A K+ PAL GNTIV+K +E TP +A+ +K++ E GLP GV N+V G G T G LA
Sbjct: 87 LIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELA 146
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ +V ++ TGS + G+ ++ AAK N+ V LELGGK+P IV +DAD+D A + +
Sbjct: 147 GNPKVAMVSMTGSVSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDS 205
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV-VGDPFKGG-IQQGPQIDSEQFE 178
N GQ C R +V + +YDQFV + AM+ V G+P + I GP I++ E
Sbjct: 206 RVINSGQVCNCAERVYVQKGIYDQFVNRLGE-AMQAVQFGNPAERNDIAMGPLINAAALE 264
Query: 179 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
++ + + V+ GA++ GG+ + KGYY PT+ V+ +M I +E FGPV ++ +
Sbjct: 265 RVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFD 324
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPF-GGYKQ 297
L+E I +N S YGL + ++T NL+ A ++ L+ G +IN + F+A F G+++
Sbjct: 325 TLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN-RENFEAMQGFHAGWRK 383
Query: 298 SGQGREKGSYSLSNYLQVKAV 318
SG G G + L YLQ + V
Sbjct: 384 SGIGGADGKHGLHEYLQTQVV 404
|
Length = 409 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 272 bits (698), Expect = 8e-88
Identities = 130/323 (40%), Positives = 181/323 (56%), Gaps = 19/323 (5%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GN +VLK QTPL+AL +LL+EAGLP + +V+G GP G AL + D
Sbjct: 177 PALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADY 234
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 127
L FTGST TG+++ + A L +LELGGK+P IV +DAD+DKAA A A F N GQ
Sbjct: 235 LMFTGSTATGRVLAEQAG-RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQ 293
Query: 128 CCCAGSRTFVHESVYDQFVEK--ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 185
C + R +VHES+YD+FV A AM+ +G + G I Q E + ++
Sbjct: 294 LCISIERIYVHESIYDEFVRAFVAAVRAMR--LGAGYDYSADMGSLISEAQLETVSAHVD 351
Query: 186 SGVDGGAKLETGGER---LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 242
V GA + GG+ LG + +PTV TGV DM +A++E FGPV S+ D+DE
Sbjct: 352 DAVAKGATVLAGGKARPDLGP--LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDE 409
Query: 243 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-----IPFGGYKQ 297
++R+N + YGL A V+T + + +R G+V +N + + AA P GG K
Sbjct: 410 AVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVN--EGYAAAWGSVDAPMGGMKD 467
Query: 298 SGQGREKGSYSLSNYLQVKAVVT 320
SG GR G+ L Y + + + T
Sbjct: 468 SGLGRRHGAEGLLKYTESQTIAT 490
|
Length = 524 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 270 bits (692), Expect = 5e-87
Identities = 125/319 (39%), Positives = 171/319 (53%), Gaps = 12/319 (3%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+ GNT++LK A TP+ A ++L EAGLP GV+N V G G G L H + +
Sbjct: 195 AIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFI 254
Query: 69 AFTGSTTTGKIVLQLAAKSN-----LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
FTGS G + + AAK LK V E+GGK +V EDAD+D AAE + F
Sbjct: 255 TFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFG 314
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
GQ C A SR VHE VYD+ +EK L + VG+P GP I+ F+KI+ Y
Sbjct: 315 FSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSY 373
Query: 184 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
I G + G +L GGE +KGY+I+PT+F V I ++EIFGPV + +K KD D
Sbjct: 374 IEIGKEEG-RLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHA 432
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG 301
++ +N ++YGL V ++N + R VG+++ N C PFGG+ SG
Sbjct: 433 LEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTD 492
Query: 302 REKGS--YSLSNYLQVKAV 318
+ G Y L +LQ K V
Sbjct: 493 SKAGGPDY-LLLFLQAKTV 510
|
Length = 514 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 266 bits (683), Expect = 1e-86
Identities = 133/318 (41%), Positives = 183/318 (57%), Gaps = 7/318 (2%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
A K+ PA+A G +VLK A +TPLSAL ++K+L EAG+P GVL +V+G G A A+
Sbjct: 141 AHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAAD 200
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
V L+FTGS G+ L A + K + LELGG +P IV DAD+D A E F
Sbjct: 201 ERVAMLSFTGSAAVGE---ALRANAGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGF 257
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
++ GQ C + R +VHE +YD+F+E A K VGDP GP I E E++ +
Sbjct: 258 YHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVER 317
Query: 183 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 242
++ V+ GA+L GGER GA KPTV V D ++ +E FGPV I++Y D +E
Sbjct: 318 WVEEAVEAGARLLCGGERDGA---LFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEE 374
Query: 243 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQG 301
I+ +N++ YGL AG+FT +L+ A L VG V +N F +PFGG K+SG G
Sbjct: 375 AIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVG 434
Query: 302 REKGSYSLSNYLQVKAVV 319
RE Y++ + K VV
Sbjct: 435 REGVPYAMEEMTEEKTVV 452
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 266 bits (681), Expect = 4e-86
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 7/318 (2%)
Query: 7 GPALACGNTIVLKTAEQTPLSALYVSKLLHEA-GLPPGVLNIVSGYGPTAGAALASHMEV 65
PALA G T+V+K A QT + ++L E LP GV+N+ + G A L + +V
Sbjct: 139 APALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDV 198
Query: 66 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 125
D ++FTGST TG+ + AA LK + LELGGK+P IV +DAD+D A AL
Sbjct: 199 DVISFTGSTATGR-AIMAAAAPTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFA 257
Query: 126 GQCCCAGSRTFVHESVYDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C AGSR V S+ D+ ++ A LA +V G GP ID +++ + +
Sbjct: 258 GQFCMAGSRVLVQRSIADEVRDRLAARLAAVKV-GPGLDPASDMGPLIDRANVDRVDRMV 316
Query: 185 RSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241
+ GA++ G + AKG +++PT+ D I ++EIFGPV ++ + D
Sbjct: 317 ERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEA 376
Query: 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 301
E + +N + YGLAA V+T +L A + RA+R G+VWIN ++ A GGY+QSG G
Sbjct: 377 EAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLG 436
Query: 302 REKGSYSLSNYLQVKAVV 319
R G +L ++++ K +
Sbjct: 437 RLHGVAALEDFIEYKHIY 454
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 264 bits (678), Expect = 1e-85
Identities = 118/315 (37%), Positives = 159/315 (50%), Gaps = 7/315 (2%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GN ++LK + QTPL + EAGLP GV ++ T AAL + +D
Sbjct: 139 PALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHET-SAALIADPRIDH 197
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE-LAHYALFFNQG 126
++FTGS G+ + Q AA V LELGGK P V DAD+D AAE L A FFN G
Sbjct: 198 VSFTGSVAGGRAI-QRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGA-FFNSG 255
Query: 127 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 186
Q CC+ R +VHES+YD FVE A+ +GDP GP + + + + I
Sbjct: 256 QSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIAD 315
Query: 187 GVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
+ GA+ G A G Y+ PTV T V M + ++E FGPV I+K K E
Sbjct: 316 AIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEA 375
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 303
I N S+YGL A V+T ++ A L L G+V++N D D A+ + G K SG+G
Sbjct: 376 IALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVT 435
Query: 304 KGSYSLSNYLQVKAV 318
+ K+
Sbjct: 436 LSRLGYDQLTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 264 bits (676), Expect = 2e-85
Identities = 130/323 (40%), Positives = 178/323 (55%), Gaps = 19/323 (5%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GN +VLK QT L+AL+ +LL EAGLP + +V+G G G A+ + D
Sbjct: 141 PALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADY 198
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 127
+ FTGST TG++V + A L +LELGGK+P IV EDAD+DKAA A A F N GQ
Sbjct: 199 VMFTGSTATGRVVAERAG-RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQ 257
Query: 128 CCCAGSRTFVHESVYDQFVEK--ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 185
C + R +VHESVYD+FV + A A++ +G G G I Q +++ ++
Sbjct: 258 LCVSIERIYVHESVYDEFVRRFVARTRALR--LGAALDYGPDMGSLISQAQLDRVTAHVD 315
Query: 186 SGVDGGAKLETGGER---LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 242
V GA + GG LG Y+ +PTV TGV +DM + +E FGPV SI + D DE
Sbjct: 316 DAVAKGATVLAGGRARPDLGP--YFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDE 373
Query: 243 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-----IPFGGYKQ 297
I+ +N + YGL A V+T + + LR G+V +N + + AA P GG K
Sbjct: 374 AIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVN--EGYAAAWASIDAPMGGMKD 431
Query: 298 SGQGREKGSYSLSNYLQVKAVVT 320
SG GR G+ L Y + + V
Sbjct: 432 SGLGRRHGAEGLLKYTETQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 259 bits (663), Expect = 4e-83
Identities = 125/322 (38%), Positives = 173/322 (53%), Gaps = 16/322 (4%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
K+ PAL GNT+V K A Q L + +++ H+AG P GV+N+V+G G G L +H
Sbjct: 161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGR 220
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA-ELAHYALFF 123
+D ++FTGST G + + K + LELGGK P IV DAD++ AA E+ AL +
Sbjct: 221 IDVISFTGSTEVGNRLKKQHPM---KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSY 277
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ GQ C A R VHESV D+ VE K VG P+ G+ P ID + + +
Sbjct: 278 S-GQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGL 336
Query: 184 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
I V GA + GG R G G I PT+ V DM +A +E FGPV I++ D++E
Sbjct: 337 IDDAVAKGATVLNGGGREG--GNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEA 394
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-----DVFDAAIPFGGYKQS 298
I+ +N S YGL A +FT +++ A L AL VG+V IN D F PF G K S
Sbjct: 395 IELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHF----PFLGRKDS 450
Query: 299 GQGREKGSYSLSNYLQVKAVVT 320
G G + +L + + K +V
Sbjct: 451 GIGTQGIGDALRSMTRRKGIVI 472
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 253 bits (649), Expect = 2e-81
Identities = 122/319 (38%), Positives = 168/319 (52%), Gaps = 10/319 (3%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA-LAS 61
A KV PA+A G VLK A +TPLSAL + ++L E GLP G +++ A L +
Sbjct: 141 AHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPC--SRDDADLLVT 198
Query: 62 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 121
+ L+FTGS G + A K K V LELGG + IV DAD+D AA+ +
Sbjct: 199 DERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGNAAVIVDSDADLDFAAQRIIFGA 255
Query: 122 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 181
F+ GQ C + R VH SVYD+F + A GDP GP I + E++
Sbjct: 256 FYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVE 315
Query: 182 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241
++ VD GAKL TGG+R G ++PT+ V DM + +E+FGPV ++ Y D D
Sbjct: 316 GWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFD 372
Query: 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQ 300
E + N S++GL AGVFT +L+ A L VG V IN F +P+GG K SG
Sbjct: 373 EALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGI 432
Query: 301 GREKGSYSLSNYLQVKAVV 319
GRE Y++ + + +V
Sbjct: 433 GREGVRYAIEEMTEPRLLV 451
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 254 bits (649), Expect = 4e-81
Identities = 128/316 (40%), Positives = 189/316 (59%), Gaps = 1/316 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M K GPALA G T+VLK A QTP SAL +++L AG+P GV N+V+G G L
Sbjct: 162 MITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELT 221
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
S+ V KL+FTGST G+ +++ AK ++K V+LELGG +PFIV +DAD+DKA E A +
Sbjct: 222 SNPLVRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALAS 280
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F N GQ C +R +V + VYD+F EK K +GD + G+ GP ID + K+
Sbjct: 281 KFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKV 340
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
++I ++ GA++ GG+ G + +PT+ V + +AK+E FGP+ + ++KD
Sbjct: 341 EEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDE 400
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+VI ++N +++GLAA + +L + AL G V IN + + PFGG K SG
Sbjct: 401 ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGL 460
Query: 301 GREKGSYSLSNYLQVK 316
GRE Y + +YL++K
Sbjct: 461 GREGSKYGIEDYLEIK 476
|
Length = 482 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 246 bits (630), Expect = 3e-78
Identities = 127/321 (39%), Positives = 183/321 (57%), Gaps = 4/321 (1%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHM 63
K+GPALA GNT+VLK A TP A + +L+ E PPGV+NIV+ GA LA
Sbjct: 161 KLGPALAAGNTVVLKPAPDTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDP 220
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
VD ++FTGST TG+ V+ AA + LK V LELGGKS FIV +DAD+ A +A + +
Sbjct: 221 RVDMVSFTGSTATGRAVMADAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCM 279
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ GQ C +R V + YD+ V A A GDP G GP I + Q +++ Y
Sbjct: 280 HAGQGCAITTRLVVPRARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSY 339
Query: 184 IRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241
+ V G + GG R +G++++PTV G+ ++ +A++EIFGPV +++ + D
Sbjct: 340 LDLAVAEGGRFACGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDD 399
Query: 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 301
+ ++ +N S YGL+ VF + + A + +R G+V +N + A PFGGYKQSG G
Sbjct: 400 DAVRIANDSPYGLSGTVFGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIG 459
Query: 302 REKGSYSLSNYLQVKAVVTAL 322
RE G YL+ K + TA
Sbjct: 460 REMGVAGFEEYLETKLIATAA 480
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 245 bits (628), Expect = 4e-78
Identities = 117/326 (35%), Positives = 170/326 (52%), Gaps = 18/326 (5%)
Query: 8 PALACGNTIVLKTAEQTPLSALY----VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
AL GN IV+K +EQ S+ + + + L G P ++ +V+ T AL SH
Sbjct: 143 AALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPET-AEALTSHP 201
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
+D + F GS GK V+ AA+S L PV LELGGK P IV +DAD+D+ A + F
Sbjct: 202 VIDHITFIGSPPVGKKVMAAAAES-LTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQ 260
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ GQ C R VHE +YD+ +E G P G + G I +F+++ +
Sbjct: 261 SSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEEL 320
Query: 184 IRSGVDGGAKLETGGER----LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
+ V+ GA+L GG+R +G+Y PT+ V DM IA++E+FGPV ++K D
Sbjct: 321 VADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASD 380
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQ 297
+E ++ +N+++YGL A VF ++ A + L G V IN F V +PFGG K
Sbjct: 381 DEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKG 440
Query: 298 SGQGR---EKGSYSLSNYLQVKAVVT 320
SG GR E+G L N K+V
Sbjct: 441 SGFGRFAGEEGLRGLCN---PKSVTE 463
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 241 bits (615), Expect = 3e-76
Identities = 123/320 (38%), Positives = 178/320 (55%), Gaps = 3/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GN +VLK +E TPL+AL +++L + P GV+NI+ G G T G L
Sbjct: 153 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLT 211
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V ++ TGS TG+ +L A S +K +ELGGK+P IV +DAD+D E
Sbjct: 212 GHEKVRMVSLTGSIATGEHILSHTAPS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTF 270
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F+N GQ C A R + +YD VEK A G P + GP E++
Sbjct: 271 GFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERV 330
Query: 181 LKYI-RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
+K + + G K+ TGGE+ GYY PT+ G K D I + E+FGPV SI + D
Sbjct: 331 MKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDD 390
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
++V+ +N SQYGLA+ V+T ++ A+ L L+ G W+N + + +P GG K SG
Sbjct: 391 EEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSG 450
Query: 300 QGREKGSYSLSNYLQVKAVV 319
G++ Y L +Y V+ ++
Sbjct: 451 YGKDMSLYGLEDYTVVRHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 230 bits (588), Expect = 9e-72
Identities = 127/328 (38%), Positives = 176/328 (53%), Gaps = 12/328 (3%)
Query: 2 FAWKVGPALA---CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 58
FA VG +A GN +VLK AE P+ A ++L EAGLP GV+ V G G G
Sbjct: 181 FAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQFVPGSGSEVGDY 240
Query: 59 LASHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKA 113
L H + + FTGS G + + AAK +LK V E+GGK IV EDAD++ A
Sbjct: 241 LVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGKDTVIVDEDADIELA 300
Query: 114 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQID 173
A+ A + F GQ C AGSR VHE VYD+ VE+ + VG P + GP ID
Sbjct: 301 AQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGPPDSADVYVGPVID 360
Query: 174 SEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233
+ F KI++YI G G +L +GG +KGY+I PT+F V +A++EIFGPV +
Sbjct: 361 QKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKGYFIGPTIFADVDRKARLAQEEIFGPVVA 419
Query: 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIP 291
++ D DE ++ +N ++YGL GV ++N D N VG+++ N P
Sbjct: 420 FIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLYFNRNITGAIVGYQP 479
Query: 292 FGGYKQSGQGREKGSYS-LSNYLQVKAV 318
FGG+K SG + G L+ ++Q K V
Sbjct: 480 FGGFKMSGTDSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 227 bits (582), Expect = 5e-71
Identities = 116/309 (37%), Positives = 155/309 (50%), Gaps = 19/309 (6%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
W A+ACGNT VLK +E+ P +A+ +++LL EAGLP GVLN+V G G A AL H
Sbjct: 155 WMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHP 213
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
++ ++F GST G+ + + AA + K V G K+ +V DAD+++ A A F
Sbjct: 214 DIKAVSFVGSTPVGEYIYERAAANG-KRVQALGGAKNHAVVMPDADLEQTANALVGAAFG 272
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
GQ C A S D+++ K A K VG G GP I E+I
Sbjct: 273 AAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGL 332
Query: 184 IRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
I SGV+ GAKL G + G ++ PT+ V DM I K+EIFGPV SI++
Sbjct: 333 IESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDT 392
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIP-------F 292
LDE I NA+ YG A +FT + A R + G V IN IP F
Sbjct: 393 LDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGIN------VPIPVPLAFFSF 446
Query: 293 GGYKQSGQG 301
GG+K S G
Sbjct: 447 GGWKGSFFG 455
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 223 bits (569), Expect = 2e-69
Identities = 117/308 (37%), Positives = 169/308 (54%), Gaps = 11/308 (3%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
A K+ PA+A N +V+K +E+TPLSALY++ +L+EAGLPP +L +V+G L
Sbjct: 155 QVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELI 214
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
++ VD + FTG GK + AA++ + LELGG P IV EDAD+D+AA+LA
Sbjct: 215 TNPHVDLVTFTGGVAIGKYI---AARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKG 271
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ N GQ C A R V ESV D+F E GDP + G ID
Sbjct: 272 SYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILF 331
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+ + GA+L G R GA PTV V M + ++E FGPV ++++ D+
Sbjct: 332 EARVNEAIAQGARLLLGNVRDGA---LYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDI 388
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQ 297
D+ I+ SN++ YGL++GV T+ LD + L+VG+V N ++V + PFGG K
Sbjct: 389 DDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTV--NVWEVPGYRLELTPFGGIKD 446
Query: 298 SGQGREKG 305
SG G ++G
Sbjct: 447 SGLGYKEG 454
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 3e-67
Identities = 121/308 (39%), Positives = 163/308 (52%), Gaps = 18/308 (5%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
A+A GNT +LK +E TP ++ ++K++ EA + + G A A L + D
Sbjct: 123 SAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEGDAEVAQALLE--LPFDH 179
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 127
+ FTGS GKIV+ AAK +L VTLELGGKSP IV E AD+ KAA+ + F N GQ
Sbjct: 180 IFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQ 238
Query: 128 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKILKY 183
C A FVHESV D FVE A +++ G + P ++ F+++
Sbjct: 239 TCIAPDYVFVHESVKDAFVEHLKA-EIEKFYGK--DAARKASPDLARIVNDRHFDRLKGL 295
Query: 184 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
+ V GAK+E GG+ A YI PTV T V DM I ++EIFGPV I+ Y+DLDEV
Sbjct: 296 LDDAVAKGAKVEFGGQ-FDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEV 354
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF----DAAIPFGGYKQSG 299
I+ NA LA VF+ + N ++ G V +N DV + +PFGG SG
Sbjct: 355 IEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVN--DVVLHFLNPNLPFGGVNNSG 412
Query: 300 QGREKGSY 307
G G Y
Sbjct: 413 IGSYHGVY 420
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 212 bits (541), Expect = 4e-65
Identities = 112/329 (34%), Positives = 158/329 (48%), Gaps = 32/329 (9%)
Query: 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGA 57
+ W AL CGN +V K + TPL+A+ V+K+ L + GLP + ++V G G G
Sbjct: 149 WGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCG-GADVGE 207
Query: 58 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 117
AL V ++FTGST G+ V Q A LELGG + IV EDAD+D A
Sbjct: 208 ALVKDPRVPLVSFTGSTAVGRQVGQAVAA-RFGRSLLELGGNNAIIVMEDADLDLAVRAV 266
Query: 118 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV-VGDPFKGGIQQGPQIDSEQ 176
+A GQ C R VHES+YD+ +E+ A K+V +GDP G GP
Sbjct: 267 LFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKK-AYKQVRIGDPLDDGTLVGPLHTKAA 325
Query: 177 FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
+ L I G + GG+ + G Y++PT+ G+ D I K+E F P+ +LK
Sbjct: 326 VDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLS-DAPIVKEETFAPILYVLK 384
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS----VWINCFDVFDAAIP- 291
+ L+E I +N GL++ +FT +L A + GS V +N I
Sbjct: 385 FDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPK--GSDCGIVNVN--------IGT 434
Query: 292 --------FGGYKQSGQGREKGSYSLSNY 312
FGG K++G GRE GS + Y
Sbjct: 435 SGAEIGGAFGGEKETGGGRESGSDAWKQY 463
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 207 bits (529), Expect = 1e-63
Identities = 104/319 (32%), Positives = 160/319 (50%), Gaps = 21/319 (6%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
A+A GNT+VLK +E P ++ ++KL+ + P + +V G A A LA D
Sbjct: 123 GAIAAGNTVVLKPSELAPATSALLAKLIPKY-FDPEAVAVVEGGVEVATALLAEPF--DH 179
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 127
+ FTGS GKIV++ AAK +L PVTLELGGKSP IV +DA+++ AA + F N GQ
Sbjct: 180 IFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQ 238
Query: 128 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKILKY 183
C A VHES+ D+ +E +K+ + + + ++ P I+ F+++
Sbjct: 239 TCIAPDYVLVHESIKDELIE-----ELKKAIKEFYGEDPKESPDYGRIINERHFDRLASL 293
Query: 184 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
+ K+ GG+ + YI PT+ V D + ++EIFGP+ IL Y DLDE
Sbjct: 294 L-----DDGKVVIGGQV-DKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEA 347
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG 301
I+ N+ LA +F+ + ++ G V +N +PFGG SG G
Sbjct: 348 IEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMG 407
Query: 302 REKGSYSLSNYLQVKAVVT 320
G + +K+V+
Sbjct: 408 AYHGKAGFDTFSHLKSVLK 426
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 2e-63
Identities = 115/319 (36%), Positives = 159/319 (49%), Gaps = 6/319 (1%)
Query: 4 WKV----GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 59
W+V PAL GN +LK A P +ALY++ L AG P G + G A A+
Sbjct: 138 WQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLL-VGSGAVEAI 196
Query: 60 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 119
V TGS G+ V +A +K LELGG PFIV AD+D+AAE A
Sbjct: 197 LRDPRVAAATLTGSEPAGRAVAAIAGDE-IKKTVLELGGSDPFIVMPSADLDRAAETAVT 255
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
A N GQ C A R VH VYD F EK A VGDP GP + ++
Sbjct: 256 ARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDE 315
Query: 180 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
+ K + V GA + GG+R G++ PTV T + DM + +E+FGPV S+ + D
Sbjct: 316 VEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVAD 375
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
+DE I+ +NA+ +GL + +T + + L G V+IN V +PFGG K+SG
Sbjct: 376 IDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSG 435
Query: 300 QGREKGSYSLSNYLQVKAV 318
GRE ++ + + +K V
Sbjct: 436 YGRELSAHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 5e-63
Identities = 106/304 (34%), Positives = 152/304 (50%), Gaps = 8/304 (2%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GNT+V K +E TP A + +L EAGLPPGVLN+V G G G ALA+H +D
Sbjct: 120 PALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHEGIDG 178
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 127
L FTGS TG ++ + A K + LE+GG +P +V + AD+D AA L + F GQ
Sbjct: 179 LLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQ 238
Query: 128 CCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 186
C R V + V D F+E+ A + +G P GP I + + L +
Sbjct: 239 RCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQD 298
Query: 187 GVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
+ G + ERL A ++ P + T D + +EIFGP+ + +Y D DE I
Sbjct: 299 LLALGGEPLLAMERLVAGTAFLSPGIIDVTDAAD---VPDEEIFGPLLQVYRYDDFDEAI 355
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGRE 303
+NA+++GL+AG+ + + + +R G V N + PFGG SG R
Sbjct: 356 ALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRP 415
Query: 304 KGSY 307
Y
Sbjct: 416 SAYY 419
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 4e-61
Identities = 120/330 (36%), Positives = 179/330 (54%), Gaps = 15/330 (4%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+F + +A GNT++ K AE + V ++ HEAG PPGV+ + G G GA L
Sbjct: 170 IFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLT 229
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAE 115
H + + FTGS TGK + + AA+ + K + +E GGK+ IV E AD + E
Sbjct: 230 EHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVE 289
Query: 116 LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 175
+ F QGQ C A SR + + Y+ +E+ A + VG P + G GP ID+E
Sbjct: 290 GVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAE 349
Query: 176 QFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
Q K+L YI G + G +L GG+RL +GY++ PTV V IA++EIFGPV S++
Sbjct: 350 QEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVI 408
Query: 236 KYKDLD--EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI--- 290
+YKD D E ++ +N++ YGL GV++ + R VG+++IN A+
Sbjct: 409 RYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYIN--RKITGALVGV 466
Query: 291 -PFGGYKQSGQGREKGS-YSLSNYLQVKAV 318
PFGG+K SG + G + L +L++KAV
Sbjct: 467 QPFGGFKLSGTNAKTGGPHYLRRFLEMKAV 496
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 200 bits (510), Expect = 9e-61
Identities = 106/331 (32%), Positives = 161/331 (48%), Gaps = 34/331 (10%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+A GNT VLK +E TP ++ ++K++ E + +V G L D +
Sbjct: 124 AIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVAVVEGGVEENQELLDQKF--DYI 180
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 128
FTGS GKIV++ AAK +L PVTLELGGKSP IV EDA++ AA+ + F N GQ
Sbjct: 181 FFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQT 239
Query: 129 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP---QIDSEQ-FEKILKYI 184
C A VHESV ++F++ +K + + + P +I +E+ F+++ +
Sbjct: 240 CVAPDYVLVHESVKEKFIK-----ELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLL 294
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
+G K+ GG + YI+PT+ V D + ++EIFGP+ +L Y LDE I
Sbjct: 295 DNG-----KIVFGGNT-DRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAI 348
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI-------PFGGYKQ 297
+ + LA +F+ + ++ L G IN D + PFGG
Sbjct: 349 EIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCIN-----DTIMHLANPYLPFGGVGN 403
Query: 298 SGQGREKGSYSLSNYLQVKAVVTALKNPAWL 328
SG G G YS + K+++ K W
Sbjct: 404 SGMGSYHGKYSFDTFSHKKSIL---KKSTWF 431
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 199 bits (509), Expect = 1e-60
Identities = 111/320 (34%), Positives = 162/320 (50%), Gaps = 23/320 (7%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+A G T+VLK +E TP +A +++L+ + L P +V G P A L DK+
Sbjct: 132 AIAAGCTVVLKPSELTPHTAALLAELVPKY-LDPDAFQVVQGGVPETTALLEQKF--DKI 188
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 128
+TGS G+I+ + AAK +L PVTLELGGKSP IV ++AD++ AA+ + F N GQ
Sbjct: 189 FYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQI 247
Query: 129 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKILKYI 184
C A V SVYD+FVE +K+V+ + + GG P ++ F ++ +
Sbjct: 248 CVAPDYVLVDPSVYDEFVE-----ELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLL 302
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
+ K+ GGE A +I PT+ + V D + +E+FGPV I+K DLDE I
Sbjct: 303 DT---TKGKVVIGGEMDEAT-RFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAI 358
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA----IPFGGYKQSGQ 300
+ N+ LA +FT + + ++ R G V IN D PFGG SG
Sbjct: 359 KVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVIN--DTLIHVGVDNAPFGGVGDSGY 416
Query: 301 GREKGSYSLSNYLQVKAVVT 320
G G Y + + VV
Sbjct: 417 GAYHGKYGFDTFTHERTVVK 436
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 193 bits (492), Expect = 3e-58
Identities = 112/315 (35%), Positives = 155/315 (49%), Gaps = 29/315 (9%)
Query: 6 VGP---ALACGNTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 61
+GP ALA GN +++K +E TP SAL +++LL E + +V+G G AA S
Sbjct: 119 LGPLIAALAAGNRVMIKPSEFTPRTSAL-LAELLAEY-FDEDEVAVVTG-GADVAAAF-S 174
Query: 62 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 121
+ D L FTGST G+ V++ AA+ NL PVTLELGGKSP I+ DAD+ KAAE +
Sbjct: 175 SLPFDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGK 233
Query: 122 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQF 177
N GQ C A V E ++FV A A A+ ++ + P I+ +
Sbjct: 234 LLNAGQTCVAPDYVLVPEDKLEEFVAAAKA-AVAKMYPT-----LADNPDYTSIINERHY 287
Query: 178 EKILKYIRSGVDGGAKLET---GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 234
++ + GA++ GE A + PT+ V DDM + ++EIFGP+ I
Sbjct: 288 ARLQGLLEDARAKGARVIELNPAGEDFAATR-KLPPTLVLNVTDDMRVMQEEIFGPILPI 346
Query: 235 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAA---I 290
L Y LDE I NA LA F + + ++R G V IN D A +
Sbjct: 347 LTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIN--DTLLHVAQDDL 404
Query: 291 PFGGYKQSGQGREKG 305
PFGG SG G G
Sbjct: 405 PFGGVGASGMGAYHG 419
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 190 bits (484), Expect = 7e-57
Identities = 112/319 (35%), Positives = 155/319 (48%), Gaps = 12/319 (3%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
+V PA+A G +++K A TPLS L LLHEAGLP G V A L +
Sbjct: 144 QVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVA-EKLVTDPR 202
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVT---LELGGKSPFIVCEDADVDKAAELAHYAL 121
V +F GS G ++ +S L P T LE GG +P IV AD+D
Sbjct: 203 VAFFSFIGSARVGWML-----RSKLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGG 257
Query: 122 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 181
F++ GQ C + R FV + D F ++ A A K VVGDP + GP I + +++
Sbjct: 258 FYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVE 317
Query: 182 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241
+++ V GA+L GG+RL Y PTV D ++ EIFGPV + Y DLD
Sbjct: 318 EWVNEAVAAGARLLCGGKRLSDTTY--APTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLD 375
Query: 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQ 300
E I ++N+ A VFT +LD A +R L +V +N F +PF G +QSG
Sbjct: 376 EAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGY 435
Query: 301 GREKGSYSLSNYLQVKAVV 319
G Y++ + Q K V
Sbjct: 436 GTGGIPYTMHDMTQEKMAV 454
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 188 bits (481), Expect = 9e-56
Identities = 108/324 (33%), Positives = 161/324 (49%), Gaps = 36/324 (11%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
ALA GNT++ K AEQTPL A +LLHEAG+P VL +V G G G AL +H +D +
Sbjct: 191 ALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGV 250
Query: 69 AFTGSTTTGKIVLQ-LAAKSN-LKPVTLELGGKSPFIVCEDADVDKA-AELAHYALFFNQ 125
FTGST T K++ + LA + + P+ E GGK+ IV A ++A ++ A F +
Sbjct: 251 IFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSA 309
Query: 126 GQCCCAGSRTFVHESVYDQFVE--KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
GQ C A ++ E + ++F+E K ++K VGDP+ GP ID + + +
Sbjct: 310 GQRCSALRLLYLQEEIAERFIEMLKGAMASLK--VGDPWDLSTDVGPLIDKPAGKLLRAH 367
Query: 184 IRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
+L G L GY++ P + V L E+FGP+ +++
Sbjct: 368 T--------ELMRGEAWLIAPAPLDDGNGYFVAPGIIEIVGIFDL--TTEVFGPILHVIR 417
Query: 237 YK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---- 290
+K DLDE I+ NA+ YGL G+ + + + G+++IN AI
Sbjct: 418 FKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNIT--GAIVGRQ 475
Query: 291 PFGGYKQSGQGREKGSYSLSNYLQ 314
PFGG+ SG G + G NYL
Sbjct: 476 PFGGWGLSGTGPKAGGP---NYLL 496
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 174 bits (444), Expect = 1e-50
Identities = 103/313 (32%), Positives = 159/313 (50%), Gaps = 11/313 (3%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+A GNT+VLK +E +P ++ ++KLL + L P + ++ G L D +
Sbjct: 133 AIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEGGVEVTTELLKEPF--DHI 189
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 128
FTGS GK+V+Q AA+ NL P TLELGGKSP IV + ++ AA + F N GQ
Sbjct: 190 FFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQT 248
Query: 129 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 188
C A VH S+ D+F+E A A+K G+ K ++ +++ + I+
Sbjct: 249 CVAPDYVLVHRSIKDKFIE-ALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK--- 304
Query: 189 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 248
D G K+ GGE + + Y+ PT+ D + ++EIFGP+ IL Y+++DEV++ N
Sbjct: 305 DHGGKVVYGGE-VDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFIN 363
Query: 249 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS 306
+ LA F + ++ G+V IN F + + +PFGG SG G G
Sbjct: 364 SRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGK 423
Query: 307 YSLSNYLQVKAVV 319
Y + K V+
Sbjct: 424 YGFDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 171 bits (434), Expect = 1e-49
Identities = 101/315 (32%), Positives = 154/315 (48%), Gaps = 10/315 (3%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
P L GN +LK A A ++++ +AG+P GV ++ A S M D
Sbjct: 149 PILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLN-----ADNDGVSQMINDS 203
Query: 68 ----LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
+ TGS G + A + LK LELGG PFIV DAD++ A + A +
Sbjct: 204 RIAAVTVTGSVRAGAAIGAQAGAA-LKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ 262
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
N GQ C A R + E + F E+ A A +GDP GP + +++
Sbjct: 263 NTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQ 322
Query: 184 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
+ + + GA+L GGE++ G Y PTV V +M ++E+FGPV +I KD +
Sbjct: 323 VEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHA 382
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 303
++ +N S++GL+A +FT + A + L G V+IN + DA + FGG K+SG GRE
Sbjct: 383 LELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRE 442
Query: 304 KGSYSLSNYLQVKAV 318
+ L + ++ V
Sbjct: 443 LSHFGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 165 bits (418), Expect = 5e-47
Identities = 104/327 (31%), Positives = 160/327 (48%), Gaps = 14/327 (4%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+F ++ ALA GNT++ K AEQT L A +L+ EAG P G + ++ G G GAAL
Sbjct: 176 IFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALT 235
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL--ELGGKSPFIVCEDADVDKAAELAH 118
S + +AFTGST +++ Q A+ PV L E GG++ IV A ++
Sbjct: 236 SDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVL 295
Query: 119 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 178
+ F + GQ C A V E V D+ + + VG P GP ID+E +
Sbjct: 296 RSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQ 355
Query: 179 KILKYIRSGVDGG---AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
+L +I A+L R G ++ PT+F DD+ +E+FGPV ++
Sbjct: 356 NLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFE--LDDIAELSEEVFGPVLHVV 413
Query: 236 KYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI--- 290
+YK +LD+++ + N + YGL GV + T + + RVG+ ++N + A +
Sbjct: 414 RYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVN-RNQVGAVVGVQ 472
Query: 291 PFGGYKQSGQG-REKGSYSLSNYLQVK 316
PFGG SG G + G + L QV+
Sbjct: 473 PFGGQGLSGTGPKAGGPHYLYRLTQVQ 499
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 8e-47
Identities = 114/332 (34%), Positives = 162/332 (48%), Gaps = 25/332 (7%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
K+ PAL GN +VLK Q ++AL++ H AG P G+++ V+G G G L H
Sbjct: 178 KIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPG 237
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
V+ ++FTG T + ++ K+ + P+ +ELGGK IV EDAD+D AA F
Sbjct: 238 VNCISFTGGDTG----IAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSY 293
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C A V ESV D VEK NA K VG P + I E +I
Sbjct: 294 SGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP-----EDDCDITPVVSESSANFI 348
Query: 185 RSGVDG----GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
V GA +R +G I P + V+ DM IA +E FGPV +++ +
Sbjct: 349 EGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 405
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-----DVFDAAIPFGGY 295
+E I NAS +GL VFT +++ A + A+ G+V IN D F PF G
Sbjct: 406 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHF----PFQGL 461
Query: 296 KQSGQGREKGSYSLSNYLQVKAVVTALKNPAW 327
K SG G + + S++ +VK+ V L P++
Sbjct: 462 KDSGIGSQGITNSINMMTKVKSTVINLPKPSY 493
|
Length = 496 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 3e-46
Identities = 114/313 (36%), Positives = 165/313 (52%), Gaps = 35/313 (11%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
ALA GNT++ K AEQTPL A KLLHEAG+P VL ++ G G T GAAL + + +
Sbjct: 708 ALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGV 767
Query: 69 AFTGSTTTGKIVLQ-LAAKSNLKPVTL--ELGGKSPFIVCEDA---------DVDKAAEL 116
AFTGST T +I+ + LAA+ V L E GG++ IV D+ DV +A
Sbjct: 768 AFTGSTETARIINRTLAARDG-PIVPLIAETGGQNAMIV--DSTALPEQVVDDVVTSA-- 822
Query: 117 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSE 175
F + GQ C A FV E + D+ +E A+A + VGDP GP ID+E
Sbjct: 823 -----FRSAGQRCSALRVLFVQEDIADRVIEMLKGAMA-ELKVGDPRLLSTDVGPVIDAE 876
Query: 176 QFEKILKYIRSGVDGGAKL--ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233
+ +I + A+L + G+++ PT F D + + E+FGP+
Sbjct: 877 AKANLDAHIER-MKREARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILH 933
Query: 234 ILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI- 290
+++YK DLD+VI NA+ YGL G+ + +TA+ + +RVG+V++N + A +
Sbjct: 934 VIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVN-RNQIGAVVG 992
Query: 291 --PFGGYKQSGQG 301
PFGG SG G
Sbjct: 993 VQPFGGQGLSGTG 1005
|
Length = 1038 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 6e-46
Identities = 111/309 (35%), Positives = 152/309 (49%), Gaps = 27/309 (8%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN-----IVSGYGPTAGAALASHM 63
A+A GN +V+K +E +P +A KLL E L P L+ +V G G L
Sbjct: 124 AIAAGNCVVIKPSEVSPATA----KLLAE--LIPKYLDKECYPVVLG-GVEETTELLKQ- 175
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
D + +TGST+ GKIV+Q AAK +L PVTLELGGKSP V + D+D AA + F
Sbjct: 176 RFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFI 234
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
N GQ C A V ++FVE +K G+ K G I+ F+++ K
Sbjct: 235 NAGQTCIAPDYVLCTPEVQEKFVEALKK-TLKEFYGEDPKESPDYGRIINDRHFQRLKKL 293
Query: 184 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
+ G K+ GG+ K YI PTV T VK + ++EIFGP+ I+ +LDE
Sbjct: 294 LSGG-----KVAIGGQ-TDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEA 347
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSG 299
I+ N+ + LA VF++N N ++ G V +N D PFGG SG
Sbjct: 348 IEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN--DTIMHYTLDSLPFGGVGNSG 405
Query: 300 QGREKGSYS 308
G G YS
Sbjct: 406 MGAYHGKYS 414
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 3e-45
Identities = 99/304 (32%), Positives = 152/304 (50%), Gaps = 17/304 (5%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GNT+V K +E TP A KL +AGLP GVLN+V G G G ALA+H ++D
Sbjct: 157 PALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDG 215
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 127
L FTGS TG ++ + A K + LE+GG +P ++ E AD+D A L + F + GQ
Sbjct: 216 LLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQ 275
Query: 128 CCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDPFKGGIQQ-----GPQIDSEQFEKIL 181
C R V + D F+ + A+A + VG + G I + + ++
Sbjct: 276 RCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWD----AEPQPFMGAVISEQAAQGLV 331
Query: 182 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKD 239
+ G K +L A + P + TGV + + +E FGP+ +++Y D
Sbjct: 332 AAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAE---LPDEEYFGPLLQVVRYDD 388
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV-WINCFDVFDAAIPFGGYKQS 298
DE I+ +N +++GL+AG+ + + + + + +R G V W +A PFGG S
Sbjct: 389 FDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGAS 448
Query: 299 GQGR 302
G R
Sbjct: 449 GNHR 452
|
Length = 487 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 8e-45
Identities = 108/321 (33%), Positives = 161/321 (50%), Gaps = 14/321 (4%)
Query: 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 61
F ++ ALA GN+++ K AEQTPL A +LLHEAG+PPGVL ++ G G T GAAL +
Sbjct: 253 FTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTA 312
Query: 62 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL--ELGGKSPFIVCEDADVDKAAELAHY 119
V + FTGST +++ + AK +P+ L E GG++ IV A ++
Sbjct: 313 DARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLA 372
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
+ F + GQ C A + E V D+ + + VG+P + GP ID+E
Sbjct: 373 SAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKAN 432
Query: 180 ILKYI-RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
I K+I G + KG ++ PT+ D L + E+FGPV +++YK
Sbjct: 433 IEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDEL--QREVFGPVLHVVRYK 490
Query: 239 --DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFG 293
+LDEVI + NA+ YGL GV T +T + G++++N ++ A + PFG
Sbjct: 491 RDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVN-RNIVGAVVGVQPFG 549
Query: 294 GYKQSGQGREKGSYSLSNYLQ 314
G SG G + G YL
Sbjct: 550 GEGLSGTGPKAGG---PLYLL 567
|
Length = 769 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 158 bits (403), Expect = 2e-44
Identities = 106/324 (32%), Positives = 152/324 (46%), Gaps = 25/324 (7%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GN ++ K ++ LS V K+L EAGLPPGV+N V G GP G + + +
Sbjct: 193 PALM-GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAG 251
Query: 68 LAFTGSTTT-----GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
L FTGST T +I L + E GGK+ +V ADVD F
Sbjct: 252 LHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAF 311
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
QGQ C A SR +V ES++ + E+ + +GDP G ID + F++I
Sbjct: 312 EYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKG 371
Query: 183 YI-RSGVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKD 239
YI + D A++ GG+ + GY+++PTV T K ++ +EIFGPV ++ Y D
Sbjct: 372 YIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLM--TEEIFGPVLTVYVYPD 429
Query: 240 --LDEVIQR-SNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVFDAAI---- 290
+E ++ S Y L +F + ALR G+ +IN D A+
Sbjct: 430 SDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYIN--DKPTGAVVGQQ 487
Query: 291 PFGGYKQSGQGREKGSYSLSNYLQ 314
PFGG + SG + GS L
Sbjct: 488 PFGGARASGTNDKAGS---PLNLL 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 3e-44
Identities = 105/330 (31%), Positives = 149/330 (45%), Gaps = 22/330 (6%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
W A+ACGNT VLK +E+ P +A+ +++L EAG P GVLN+V G A L H
Sbjct: 155 WMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHP 213
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
+V ++F GST G+ + + K V G K+ +V DAD D AA+ A +
Sbjct: 214 DVKAVSFVGSTPIGRYIHTTGSAHG-KRVQALGGAKNHMVVMPDADKDAAADALVGAAYG 272
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
GQ C A S V D++V + A K +G G + GP I + +++
Sbjct: 273 AAGQRCMAIS-AAVLVGAADEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASL 331
Query: 184 IRSGVDGGAKLETGGERLGAKGY----YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
I G GA++ G GY ++ PT+ V M ++EIFGPV +L+
Sbjct: 332 IAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADT 391
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIP-------F 292
L+E I NAS YG +FT + A + VG V +N IP F
Sbjct: 392 LEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVN------VPIPVPLPYFSF 445
Query: 293 GGYKQS--GQGREKGSYSLSNYLQVKAVVT 320
G+K S G G Y + K V T
Sbjct: 446 TGWKDSFFGDHHIYGKQGTHFYTRGKTVTT 475
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 1e-43
Identities = 102/311 (32%), Positives = 154/311 (49%), Gaps = 19/311 (6%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GNT+V K +E TP A KL +AGLP GVLN+V G G ALA+H ++D
Sbjct: 155 PALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDG 213
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 127
L FTGS+ TG ++ + A K + LE+GG +P IV E AD+D A L + F + GQ
Sbjct: 214 LLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQ 273
Query: 128 CCCAGSRTFVHESVY-DQFVEKANALAMKRVVGD------PFKGGIQQGPQIDSEQFEKI 180
C R V + D F+ + +A + VG PF G + I + +++
Sbjct: 274 RCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAV-----ISLQAAQRL 328
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYK 238
L + G K +L + P + TGV + + +E FGP+ +++Y
Sbjct: 329 LAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAE---LPDEEHFGPLLQVIRYD 385
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV-WINCFDVFDAAIPFGGYKQ 297
D DE I +N +++GL+AG+ + + + + + +R G V W +A PFGG
Sbjct: 386 DFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGA 445
Query: 298 SGQGREKGSYS 308
SG R Y+
Sbjct: 446 SGNHRPSAYYA 456
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 154 bits (390), Expect = 7e-43
Identities = 104/327 (31%), Positives = 164/327 (50%), Gaps = 28/327 (8%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAAL 59
W AL CGN +V K A TPL + ++KL L + LP + G G G A+
Sbjct: 173 WNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAI 231
Query: 60 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 119
A + ++FTGS+ G +V Q + LEL G + IV +DAD+ A +
Sbjct: 232 AKDTRIPLVSFTGSSKVGLMV-QQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLF 290
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP---QIDSEQ 176
A GQ C R +HES+YD +E+ + + +GDP + G GP +
Sbjct: 291 AAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKN 350
Query: 177 FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
FEK ++ I+S G K+ TGG + ++G +++PT+ + D + K+E+FGPV ++K
Sbjct: 351 FEKGIEIIKS---QGGKILTGGSAIESEGNFVQPTIVE-ISPDADVVKEELFGPVLYVMK 406
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIP----- 291
+K L+E I+ +N+ GL++ +FT N +T +G + +C + + IP
Sbjct: 407 FKTLEEAIEINNSVPQGLSSSIFTRNPETIFKW-----IGPLGSDC-GIVNVNIPTNGAE 460
Query: 292 ----FGGYKQSGQGREKGSYSLSNYLQ 314
FGG K +G GRE GS S Y++
Sbjct: 461 IGGAFGGEKATGGGREAGSDSWKQYMR 487
|
Length = 508 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 1e-40
Identities = 102/313 (32%), Positives = 147/313 (46%), Gaps = 15/313 (4%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GNT++ K ++ LS V ++L EAGLPPGV+N V G GP + + ++
Sbjct: 192 PALM-GNTVIWKPSDTAMLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAG 250
Query: 68 LAFTGSTTT-----GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
+ FTGST T ++ L N + E GGK +V ADV+ F
Sbjct: 251 IHFTGSTPTFKHLWKQVAQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAF 310
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
QGQ C A SR +V S++ +F + A + VGDP G G ID + F KI+K
Sbjct: 311 EYQGQKCSACSRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVK 370
Query: 183 YIRSGVDGGAKLET--GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD- 239
YI + L GG+ + GY+++PTV + K+EIFGPV ++ Y D
Sbjct: 371 YIEHAKSDPSALTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDD 430
Query: 240 -LDEVIQR-SNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWIN--CFDVFDAAIPFG 293
E++ + + YGL VF + D + LR G+ +IN PFG
Sbjct: 431 KYKEILDLVDSTTSYGLTGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFG 490
Query: 294 GYKQSGQGREKGS 306
G + SG + G
Sbjct: 491 GARASGTNDKAGG 503
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 4e-40
Identities = 103/323 (31%), Positives = 155/323 (47%), Gaps = 55/323 (17%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
AL GNT++ K AEQTPL A +LLHEAG+P L ++ G G T GAAL + + +
Sbjct: 700 ALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGV 759
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTL--ELGGKSPFIVCED---------ADVDKAAELA 117
FTGST +++ + AK + PV L E GG++ IV D ADV +A
Sbjct: 760 MFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIV--DSSALPEQVVADVIASA--- 814
Query: 118 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL--AMK-RVVGDPFKGGIQQGPQIDS 174
F + GQ C A + E V D+ + L AM +GDP++ GP ID+
Sbjct: 815 ----FDSAGQRCSALRVLCLQEDVADRVLT---MLKGAMDELRIGDPWRLSTDVGPVIDA 867
Query: 175 EQFEKILKYIRSGVDGGAKLETGGERL--------GAKGYYIKPTVFTGVKD--DMLIAK 224
E I +I + G + KG ++ PT+ + D+ +
Sbjct: 868 EAQANIEAHI-------EAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-IDSISDL---E 916
Query: 225 DEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 282
E+FGPV ++++K +LD VI NA+ YGL G+ + +T + +R G++++N
Sbjct: 917 REVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNR 976
Query: 283 FDVFDAAI----PFGGYKQSGQG 301
+ A+ PFGG SG G
Sbjct: 977 NII--GAVVGVQPFGGEGLSGTG 997
|
Length = 1208 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 141 bits (356), Expect = 9e-38
Identities = 112/331 (33%), Positives = 159/331 (48%), Gaps = 16/331 (4%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
W A+ CGNT +LK +E+ P +++ +++L EAGLP GVLNIV G T A +
Sbjct: 268 WMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNA-ICDDE 326
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
++ ++F GS T G + AA K + +G K+ +V DA++D A F
Sbjct: 327 DIRAVSFVGSNTAGMHIYARAAAKG-KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFG 385
Query: 124 NQGQCCCAGSRT-FVHE--SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
GQ C A S FV + S D+ VE+A AL K G + GP I + E+I
Sbjct: 386 AAGQRCMALSTVVFVGDAKSWEDKLVERAKAL--KVTCGSEPDADL--GPVISKQAKERI 441
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGY----YIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
+ I+SGVD GAKL G + GY +I PT+ +GV DM K+EIFGPV ++
Sbjct: 442 CRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQ 501
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGY 295
DE I N ++YG A +FT + A + G + IN V F G
Sbjct: 502 ANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGN 561
Query: 296 KQSGQGREK--GSYSLSNYLQVKAVVTALKN 324
K S G G + + Q+K V K+
Sbjct: 562 KASFAGDLNFYGKAGVDFFTQIKLVTQKQKD 592
|
Length = 604 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 2e-36
Identities = 100/325 (30%), Positives = 147/325 (45%), Gaps = 30/325 (9%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+A GN +VLK +E P ++ ++KL+ L + ++ G G AL + DK+
Sbjct: 125 AIAAGNAVVLKPSELAPATSALLAKLI-PEYLDTKAIKVIEG-GVPETTALLEQ-KWDKI 181
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE---LAHYALFFNQ 125
FTGS G+I++ AAK +L PVTLELGGK P IV D+ A + N
Sbjct: 182 FFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC--NN 238
Query: 126 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF-KGGIQQG--PQIDSEQFEKILK 182
GQ C A V ES ++ A+K + F + + +I + + L
Sbjct: 239 GQACIAPDYVLVEESFAPTLID-----ALKNTLEKFFGENPKESKDLSRIVNSHHFQRLS 293
Query: 183 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 242
+ K+ GGER K YI+PT+ D I +EIFGP+ I+ K ++E
Sbjct: 294 RLLDDPSVADKIVHGGER-DEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEE 352
Query: 243 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI-------PFGGY 295
I+ N+ LAA VFT N + ++ G V N D + PFGG
Sbjct: 353 SIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFN-----DTVVQYAIDTLPFGGV 407
Query: 296 KQSGQGREKGSYSLSNYLQVKAVVT 320
+SG G G +S + KAV+
Sbjct: 408 GESGFGAYHGKFSFDAFSHKKAVLY 432
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 6e-33
Identities = 106/331 (32%), Positives = 158/331 (47%), Gaps = 44/331 (13%)
Query: 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 61
F +V ALA GN+++ K AEQTPL A ++L EAG+P GV+ ++ G G T GAAL +
Sbjct: 785 FTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVA 844
Query: 62 HMEVDKLAFTGSTTTGKIVLQ------LAAKSNLKPVTLELGGKSPFIVCEDA------- 108
V + FTGST ++ LQ L + P+ E GG++ IV A
Sbjct: 845 DARVRGVMFTGSTEVARL-LQRNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVA 903
Query: 109 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR------VVGDPF 162
DV +A F + GQ C A + + V D+ L M R +G+P
Sbjct: 904 DVLASA-------FDSAGQRCSALRVLCLQDDVADR------TLKMLRGAMAECRMGNPD 950
Query: 163 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAK---LETGGERLGAKGYYIKPTVFTGVKDD 219
+ GP ID+E I ++I++ G G ++ PT+ D
Sbjct: 951 RLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFD 1010
Query: 220 MLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 277
L K E+FGPV +++Y LDE+I++ NAS YGL GV T +T + + VG+
Sbjct: 1011 EL--KREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGN 1068
Query: 278 VWINCFDVFDAAI---PFGGYKQSGQGREKG 305
+++N ++ A + PFGG SG G + G
Sbjct: 1069 LYVN-RNMVGAVVGVQPFGGEGLSGTGPKAG 1098
|
Length = 1318 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 5e-29
Identities = 93/314 (29%), Positives = 146/314 (46%), Gaps = 10/314 (3%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A++ GN +VLK +E P S+ ++KLL E L + +V G A L + DK+
Sbjct: 136 AISAGNAVVLKPSELAPASSALLAKLL-EQYLDSSAVRVVEGAVTETTALL--EQKWDKI 192
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-FNQGQ 127
+TGS+ G++++ AAK +L PV LELGGKSP +V D D+ + N GQ
Sbjct: 193 FYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQ 251
Query: 128 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 187
C + + + ++ A ++ G ++S F+++ K +
Sbjct: 252 ACISPDYILTTKEYAPKVID-AMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEK 310
Query: 188 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 247
+ K+ GGE+ + I PT+ V D LI +EIFGP+ IL +L+E
Sbjct: 311 -EVSDKIVYGGEK-DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVI 368
Query: 248 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA--AIPFGGYKQSGQGREKG 305
+ LAA +FTHN + G + +N V A +PFGG +SG G G
Sbjct: 369 RSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHG 428
Query: 306 SYSLSNYLQVKAVV 319
+S + KAV+
Sbjct: 429 KFSFDAFSHKKAVL 442
|
Length = 484 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 9e-27
Identities = 95/334 (28%), Positives = 149/334 (44%), Gaps = 45/334 (13%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+A GN +VLK +E P ++ +++ + L + ++ G GP G L H + DK+
Sbjct: 132 AIAAGNAVVLKPSELAPATSAFLAANI-PKYLDSKAVKVIEG-GPAVGEQLLQH-KWDKI 188
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV-CEDADVDK--------AAELAHY 119
FTGS G+I++ AAK +L PV LELGGK P IV + D +
Sbjct: 189 FFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSC 247
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
A GQ C A V E +E + +K+ G+ + ++ + F++
Sbjct: 248 A-----GQACIAIDYVLVEERFAPILIELLKST-IKKFFGENPRESKSMARILNKKHFQR 301
Query: 180 ILKYIR------SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233
+ ++ S V GG+ + K +I+PT+ D I +EIFGP+
Sbjct: 302 LSNLLKDPRVAASIVHGGS--------IDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLP 353
Query: 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA----- 288
I+ K +++ I N+ LA FT+N ++ GSV N DA
Sbjct: 354 IITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFN-----DAIIQYA 408
Query: 289 --AIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320
++PFGG +SG GR G YS + KAV+
Sbjct: 409 CDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLR 442
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 8e-23
Identities = 84/293 (28%), Positives = 118/293 (40%), Gaps = 36/293 (12%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHM 63
K PAL G +++K A T V K + E+G LP G L ++ G + G L
Sbjct: 164 KFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICG---SVGDLLDHLG 220
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHY 119
E D +AFTGS T +L A N+ E + I+ DA +
Sbjct: 221 EQDVVAFTGSAATAA---KLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPE----F 273
Query: 120 ALFFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 170
LF + GQ C A R FV E+ D +E A K VVGDP G++ GP
Sbjct: 274 DLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGP 333
Query: 171 QIDSEQFEKILKYI---RSG---VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 224
+ EQ E + + + V GG KG + PT+ DD A
Sbjct: 334 LVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLC--DDPDAAT 391
Query: 225 D----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 273
E FGPV +++ Y L E I+ + + L A V T++ A L+
Sbjct: 392 AVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGA 444
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 96.5 bits (240), Expect = 2e-22
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 26/270 (9%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHM 63
++ ALA GN +++K + + +LLH AG LPP + +++G G T AL H
Sbjct: 120 QLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT-MQALLLHP 178
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYALF 122
+ FTGS+ + +LA + + LEL G + ++ DA VD A +
Sbjct: 179 NPKMVLFTGSSRVAE---KLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMT 235
Query: 123 FNQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 181
GQ C A S FV E+ VEK AL +R + D G +Q + ++
Sbjct: 236 ACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQ------TFTTLAMI 289
Query: 182 KYIRSGVDGGAKLETGGERLGAK------GYYIKPTVFTGVKDDMLIAK---DEIFGPVQ 232
++ + G+ L G+ L G + +F + + + + +EIFGP
Sbjct: 290 AHMEN--LLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFA 347
Query: 233 SILKYKDLDE--VIQRSNASQYGLAAGVFT 260
+++YK V++ L A +++
Sbjct: 348 IVVEYKKDQLALVLELLERMHGSLTAAIYS 377
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 3e-19
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 45/288 (15%)
Query: 3 AW----KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGA 57
AW K PAL G +++K A T + K + AG LP G L++V G + A
Sbjct: 162 AWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSA 217
Query: 58 ALASHM-EVDKLAFTGSTTTGKI------VLQLAAKSNLKPVTLELGGKSPFIVCEDADV 110
L H+ D ++FTGS T + V+Q + + N++ +L ++ DA
Sbjct: 218 GLLDHLQPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSA-----LLGPDAAP 272
Query: 111 DKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161
A + LF + GQ C A R FV E++YD E A K VG+P
Sbjct: 273 GSEA----FDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNP 328
Query: 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTG 215
G++ GP + Q + + + + A++ G A + PT+ G
Sbjct: 329 RNDGVRMGPLVSRAQLAAVRAGL-AALRAQAEVLFDGGGFALVDADPAVAACVGPTLL-G 386
Query: 216 VKDDM---LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 260
D + E+FGPV ++L Y+D + + Q L A V++
Sbjct: 387 ASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYS 434
|
Length = 521 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 1e-17
Identities = 90/339 (26%), Positives = 140/339 (41%), Gaps = 34/339 (10%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL-PPGVLNIVSGYGPTAGAALASHM 63
K PA G + K A T A + + + E+GL P G L ++ G +AG L
Sbjct: 164 KFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICG---SAGDLLDHLD 220
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHY 119
D +AFTGS T +L A N+ E + I+ EDA D+ E +
Sbjct: 221 HRDVVAFTGSAATAD---RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEP-EFDLF 276
Query: 120 A------LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQID 173
A L GQ C A R V +++ + ++ A K V+GDP + G+ GP +
Sbjct: 277 AQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVS 336
Query: 174 SEQFEKILKYIRSGVDGGAKLETGG-ERLGAKGYYIKPTVFTGVKDDMLIAKD-EIFGPV 231
EQ + + + + GA++ GG RL G + PT+ E FGPV
Sbjct: 337 LEQRADVEAAVAALLAAGAEVRLGGPGRL--DGAFFPPTLLLAEDPWAGAVHATEAFGPV 394
Query: 232 QSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-- 289
+ Y D E + + L A + T + + A + L ++ + DAA
Sbjct: 395 ATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAES 454
Query: 290 ------IP---FGGYKQSGQGREKGSY-SLSNYLQVKAV 318
+P GG ++G G E G S+ +Y+Q A+
Sbjct: 455 TGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAI 493
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 79.5 bits (197), Expect = 2e-16
Identities = 85/298 (28%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHM 63
K+ PA G ++K A T V +L+ E+G LP G L ++ G +AG L
Sbjct: 168 KLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICG---SAGDLLDHLD 224
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD--------VDKAAE 115
D + FTGS T + +L A N+ + PF +AD D
Sbjct: 225 GQDVVTFTGSAATAQ---KLRAHPNV------VANSVPFTA--EADSLNAAILGPDATPG 273
Query: 116 LAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 166
+ LF + GQ C A R V ++ D +E A K VVGDP G+
Sbjct: 274 TPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGV 333
Query: 167 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGA---KGYYIKPTVFTGVKDD 219
+ G EQ E + + + + + A++ GG E +GA KG + PT+ DD
Sbjct: 334 RMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYC--DD 390
Query: 220 MLIAKD----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 273
L A E FGPV +++ Y DLDE I+ + + L A + T + + A L+
Sbjct: 391 PLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGA 448
|
Length = 675 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 74.5 bits (184), Expect = 7e-15
Identities = 71/293 (24%), Positives = 106/293 (36%), Gaps = 34/293 (11%)
Query: 9 ALACGNTIVLK-------TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 61
ALA G +V+K T+E L A + L GLP GV +++ G G G AL
Sbjct: 131 ALAAGCPVVVKAHPAHPGTSE---LVARAIRAALRATGLPAGVFSLLQGGGREVGVALVK 187
Query: 62 HMEVDKLAFTGSTTTGKIVLQLAAKSNL-KPVTLELGGKSPFIVCEDADVDKAAELA--- 117
H + + FTGS G+ + AA P ELG +P + A ++ +A
Sbjct: 188 HPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGF 247
Query: 118 HYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQ 176
+L GQ C V D F+ GI + + E
Sbjct: 248 VGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEA 307
Query: 177 FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD----EIFGPVQ 232
+ G L G G PT+F V +A E+FGP
Sbjct: 308 --------LAAAPGVRVLAGGAAAEGGNQA--APTLFK-VDAAAFLADPALQEEVFGPAS 356
Query: 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHN--LDTANTLMRAL--RVGSVWIN 281
+++Y D E++ + A + L A + L A L+ L + G + N
Sbjct: 357 LVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLLFN 409
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-11
Identities = 77/270 (28%), Positives = 119/270 (44%), Gaps = 35/270 (12%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
AL GN +LK + + +LLH G+P ++++ GPT L
Sbjct: 166 ALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKIL-LEANPRMT 224
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED-ADVDKAAELAHYALFFNQGQ 127
FTGS+ K+ +LA + + K V LE G I+ D +DVD A + GQ
Sbjct: 225 LFTGSS---KVAERLALELHGK-VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQ 280
Query: 128 CCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 186
C A S F HE+ ++K ALA +R + D + GP + + E+IL ++
Sbjct: 281 KCSAQSILFAHENWVQAGILDKLKALAEQRKLED-----LTIGP-VLTWTTERILDHVDK 334
Query: 187 GVD-GGAKLETGGERL---------GAKGYYIKPT-VFTGVKDDML-----IAKDEIFGP 230
+ GAK+ GG+ L GA +PT VF +++ + + E+FGP
Sbjct: 335 LLAIPGAKVLFGGKPLTNHSIPSIYGA----YEPTAVFVPLEEIAIEENFELVTTEVFGP 390
Query: 231 VQSILKYKD--LDEVIQRSNASQYGLAAGV 258
Q + +YKD L V++ L A V
Sbjct: 391 FQVVTEYKDEQLPLVLEALERMHAHLTAAV 420
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 2e-06
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA----SHME 64
+A N + + P + LL +A I+ Y P LA SH +
Sbjct: 123 GIATRNQCIFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPK 181
Query: 65 VDKLAFTGSTTTGKIVLQLAAK-SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
+D + TG G+ + A K S PV G SP +V E AD ++A+ H + FF
Sbjct: 182 IDLIVATG----GRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFF 237
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEK 148
+Q C + +V + V D E+
Sbjct: 238 DQ-NACASEQNLYVVDDVLDPLYEE 261
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 6e-04
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 25/179 (13%)
Query: 9 ALACGNTIVLKTAEQTPLS-ALYVS---KLLHEAGLPPGVLNIVSGYGPTAGAA--LASH 62
+LA GN +++K L AL V ++L EAG P ++ + + + P AA LA+
Sbjct: 217 SLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAA-FDPGHEAAQRLATD 275
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
V + FTGS G+ + Q A ++ V E G + I+ D ++L
Sbjct: 276 PAVRIIDFTGSNAFGQWLEQNARQAQ---VYTEKAGVNTVIIESTDDYKAMLRNLAFSLS 332
Query: 123 FNQGQCCCA---------GSRTFVHESVYDQFVEKANALAMKRVVGDPFK-----GGIQ 167
GQ C G RT YD+ V A A+ ++GDP + G IQ
Sbjct: 333 LYSGQMCTTTQAILVPRDGIRTDQGRKSYDE-VAADLATAIDGLLGDPARATAVLGAIQ 390
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.004
Identities = 64/287 (22%), Positives = 113/287 (39%), Gaps = 52/287 (18%)
Query: 10 LACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEV 65
LA GN +V + Y +L+++A G P ++ V L +H ++
Sbjct: 122 LAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDI 181
Query: 66 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG---GKSPFIVCEDADVDKAAELAHYALF 122
+ L TG G V++ A S K + G G P +V E AD++KAA
Sbjct: 182 NLLVVTG----GPAVVKAALSSGKKAI----GAGAGNPPVVVDETADIEKAARDIVQGAS 233
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL- 181
F+ C A +SV D + AM+R ++ EQ E++L
Sbjct: 234 FDNNLPCIAEKEVIAVDSVADYLIA-----AMQR----------NGAYVLNDEQAEQLLE 278
Query: 182 -------------KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIF 228
K++ G D L+ G + A I+ + KD + +E
Sbjct: 279 VVLLTNKGATPNKKWV--GKDASKILKAAGIEVPAD---IRLIIVETDKDHPFVV-EEQM 332
Query: 229 GPVQSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLDTANTLMRAL 273
P+ +++ K+ DE I+ + ++G A + + N++ + RA+
Sbjct: 333 MPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAM 379
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 328 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.97 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 99.95 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.89 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.57 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.56 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.5 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 97.23 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 95.83 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 95.48 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 95.02 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 94.57 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 94.56 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 94.47 | |
| PLN02926 | 431 | histidinol dehydrogenase | 91.58 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 90.48 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 85.57 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 84.35 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 81.57 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-83 Score=589.68 Aligned_cols=327 Identities=64% Similarity=1.025 Sum_probs=319.5
Q ss_pred CchhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 1 ~~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+.+||++|||++||+||+||++++|+|+..+++++.++|+|+|++|+|+|.+.+.+.+|.+||+++.|.||||+.+|+.|
T Consensus 174 m~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I 253 (501)
T KOG2450|consen 174 MQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEI 253 (501)
T ss_pred HHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh-cccC
Q 020284 81 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVG 159 (328)
Q Consensus 81 ~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~-~~~g 159 (328)
++.+++.++||+++|+|||+|.||++|+|+|.|++.+..+.|+|+||.|.+.+|+|||+++||+|+++++++..+ +++|
T Consensus 254 ~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvG 333 (501)
T KOG2450|consen 254 MEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVG 333 (501)
T ss_pred hhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccC
Confidence 999998789999999999999999999999999999999999999999999999999999999999999999966 9999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
||+|+.+.+||.+++.|++|+++||+.++++|+++++||.+....|+||.|||+.++..+|.+.+||+||||++|++|++
T Consensus 334 dP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t 413 (501)
T KOG2450|consen 334 DPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKT 413 (501)
T ss_pred CCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCc
Confidence 99999999999999999999999999999999999999987667899999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
.||+|+++|++.|||++.|||+|.++++++++++++|+||||++....+..||||+|+||+||+.|.+++.+||+.|+++
T Consensus 414 ~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~ 493 (501)
T KOG2450|consen 414 EEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVT 493 (501)
T ss_pred HHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCC
Q 020284 320 TALKNPAW 327 (328)
Q Consensus 320 ~~~~~~~~ 327 (328)
++.+.++|
T Consensus 494 v~~~~~~~ 501 (501)
T KOG2450|consen 494 VKLPQKNS 501 (501)
T ss_pred EeCCCCCC
Confidence 99887765
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-80 Score=600.34 Aligned_cols=327 Identities=57% Similarity=0.979 Sum_probs=315.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|++++.+.+..|++||++|+|.||||+.+|+.|+
T Consensus 175 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~ 254 (501)
T PLN02766 175 FFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIM 254 (501)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++.+++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 255 ~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p 334 (501)
T PLN02766 255 QAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDP 334 (501)
T ss_pred HHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 98884358999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++.+++++++++|++++++|+++++||...+..|+|++|||+.++++++.+++||+||||++|++|+|++
T Consensus 335 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~d 414 (501)
T PLN02766 335 FDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVE 414 (501)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHH
Confidence 99999999999999999999999999999999999997544568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++++++||++|++++.
T Consensus 415 eai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 494 (501)
T PLN02766 415 EAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTP 494 (501)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEe
Confidence 99999999999999999999999999999999999999999877778899999999999999999999999999999999
Q ss_pred CCCCCCC
Q 020284 322 LKNPAWL 328 (328)
Q Consensus 322 ~~~~~~~ 328 (328)
+.|.+|+
T Consensus 495 ~~~~~~~ 501 (501)
T PLN02766 495 LYNSPWL 501 (501)
T ss_pred ccccccC
Confidence 9999996
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-80 Score=594.52 Aligned_cols=319 Identities=40% Similarity=0.666 Sum_probs=307.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|++||++|.|.||||+++|+.|+
T Consensus 163 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~ 242 (482)
T PRK11241 163 ITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLM 242 (482)
T ss_pred HHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|+|.|++.+++++|.|+||.|++++++|||++++|+|+++|.++++++++|+|
T Consensus 243 ~~aa~~-l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p 321 (482)
T PRK11241 243 EQCAKD-IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDG 321 (482)
T ss_pred HHHHhc-CCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.++++++.+++||+||||++|++|+|++
T Consensus 322 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~ 401 (482)
T PRK11241 322 LEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEA 401 (482)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHH
Confidence 99999999999999999999999999999999999997543468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||++||||+|.+.++++++++++|.||||++....+.+||||+|.||+|+++|.+++++||+.|++++.
T Consensus 402 eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 402 DVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred HHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 99999999999999999999999999999999999999998766667789999999999999999999999999998764
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-79 Score=598.81 Aligned_cols=327 Identities=86% Similarity=1.370 Sum_probs=315.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|.++..++++|+++|+|+|+||+|++++.+.+..|++||++|+|.||||+.+|+.|+
T Consensus 212 ~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~ 291 (538)
T PLN02466 212 FAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVL 291 (538)
T ss_pred HHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++.+++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|++++.++++|+|
T Consensus 292 ~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p 371 (538)
T PLN02466 292 ELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDP 371 (538)
T ss_pred HHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99885358999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||+++.++++++++++++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 372 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~d 451 (538)
T PLN02466 372 FKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLD 451 (538)
T ss_pred ccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHH
Confidence 99999999999999999999999999999999999998655568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.+.++++++++++|.|+||++...++.+||||+|.||+|+++|.+++++||+.|++++.
T Consensus 452 eAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~ 531 (538)
T PLN02466 452 EVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTP 531 (538)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999999999877778899999999999999999999999999999999
Q ss_pred CCCCCCC
Q 020284 322 LKNPAWL 328 (328)
Q Consensus 322 ~~~~~~~ 328 (328)
++++.|+
T Consensus 532 ~~~~~~~ 538 (538)
T PLN02466 532 LKNPAWL 538 (538)
T ss_pred CCCCCCC
Confidence 9999996
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-78 Score=581.49 Aligned_cols=319 Identities=51% Similarity=0.824 Sum_probs=305.5
Q ss_pred CchhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 1 ~~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++|+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.||++++|.||||+.+|+.|
T Consensus 149 ~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i 228 (472)
T COG1012 149 LAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAI 228 (472)
T ss_pred HHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHH
Confidence 46899999999999999999999999999999999999999999999999777789999999999999999999999999
Q ss_pred HHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh-cccC
Q 020284 81 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVG 159 (328)
Q Consensus 81 ~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~-~~~g 159 (328)
++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|+|||++++|+|+++|.++ ++ +++|
T Consensus 229 ~~~Aa~-~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~G 306 (472)
T COG1012 229 AAAAAA-NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVG 306 (472)
T ss_pred HHHHhh-cCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCC
Confidence 999998 59999999999999999999999999999999999999999999999999999999999999999 66 9999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
|+.|+.+++||+++..++++++++|++++++|+.++.||. ... |+|++|||+.+++++|.+++||+||||++|++|+|
T Consensus 307 d~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~-~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~ 384 (472)
T COG1012 307 DPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGK-RPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKD 384 (472)
T ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc-CCC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCC
Confidence 9899999999999999999999999999999999999988 333 99999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCC--CCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD--VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~--~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+||||+++|+++|||+++|||+|..++.++++++++|+||||++. ...+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 385 ~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~ 464 (472)
T COG1012 385 EEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKT 464 (472)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceE
Confidence 999999999999999999999999999999999999999999875 345789999999999999999999999999999
Q ss_pred EEEeCC
Q 020284 318 VVTALK 323 (328)
Q Consensus 318 i~~~~~ 323 (328)
+.++..
T Consensus 465 v~~~~~ 470 (472)
T COG1012 465 VTIKLG 470 (472)
T ss_pred EEEecC
Confidence 988753
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-78 Score=570.37 Aligned_cols=320 Identities=37% Similarity=0.630 Sum_probs=307.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++++++|+|+|++|++++++.+.+..|++||++|+|+||||+.+|+.|+
T Consensus 88 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~ 167 (409)
T PRK10090 88 IARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 167 (409)
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 168 ~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p 246 (409)
T PRK10090 168 AAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP 246 (409)
T ss_pred HHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99888 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKG-GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~-~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.++ ++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.++++++.+++||+||||++|++|+|+
T Consensus 247 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~ 326 (409)
T PRK10090 247 AERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL 326 (409)
T ss_pred CCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEEEEEECCH
Confidence 998 9999999999999999999999999999999999765556899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.+.++++++++++|.||||+.....+..||||+|.||+|+++|.+++++||+.|++++
T Consensus 327 ~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f~~~k~v~~ 406 (409)
T PRK10090 327 EEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 406 (409)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999999987766778999999999999999999999999999987
Q ss_pred eC
Q 020284 321 AL 322 (328)
Q Consensus 321 ~~ 322 (328)
++
T Consensus 407 ~~ 408 (409)
T PRK10090 407 QS 408 (409)
T ss_pred ec
Confidence 64
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-78 Score=581.82 Aligned_cols=320 Identities=45% Similarity=0.795 Sum_probs=308.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|++++.+.++.|+.||+++.|.||||+.+|+.|+
T Consensus 164 ~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 243 (486)
T cd07140 164 LAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIM 243 (486)
T ss_pred HHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++.+++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 244 ~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p 323 (486)
T cd07140 244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDP 323 (486)
T ss_pred HHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCC
Confidence 99886348999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeec--C
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--D 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~ 239 (328)
.++++++||+++.+++++++++|++++++|+++++||...+..|+|++|||+.++++++.+++||+||||++|++|+ +
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~ 403 (486)
T cd07140 324 LDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGD 403 (486)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCC
Confidence 99999999999999999999999999999999999997545568999999999999999999999999999999998 6
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
++|||+++|+++|||++||||+|.+.++++++++++|.||||+++...+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 404 ~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~ 483 (486)
T cd07140 404 VDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVT 483 (486)
T ss_pred HHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEE
Confidence 99999999999999999999999999999999999999999998777788999999999999999999999999999998
Q ss_pred Ee
Q 020284 320 TA 321 (328)
Q Consensus 320 ~~ 321 (328)
++
T Consensus 484 ~~ 485 (486)
T cd07140 484 IE 485 (486)
T ss_pred Ee
Confidence 75
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-77 Score=579.23 Aligned_cols=318 Identities=42% Similarity=0.697 Sum_probs=306.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++. .+..|++||++|+|.||||+.+|+.|.
T Consensus 159 ~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~ 237 (477)
T cd07113 159 AVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIG 237 (477)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999998665 889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 238 ~~aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (477)
T cd07113 238 RQAAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSP 316 (477)
T ss_pred HHHHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99988 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||++++.++++++++|++++++|+++++||......|+|+.|||+.++++++.++++|+||||++|++|+|++
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~d 396 (477)
T cd07113 317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEE 396 (477)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHH
Confidence 99999999999999999999999999999999999997544468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 397 eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 397 ELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999998777778899999999999999999999999999999865
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-77 Score=582.50 Aligned_cols=318 Identities=32% Similarity=0.421 Sum_probs=303.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+|+|+ .+.++.|+.|+++|+|.||||+.+|+.|+
T Consensus 266 ~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~-~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~ 344 (604)
T PLN02419 266 PLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGT-NDTVNAICDDEDIRAVSFVGSNTAGMHIY 344 (604)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCC-hHHHHHHHhCCCCCEEEEeCChHHHHHHH
Confidence 57899999999999999999999999999999999999999999999995 46788899999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++ +|+|+++|.++++++++|+|
T Consensus 345 ~~Aa~~-lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p 422 (604)
T PLN02419 345 ARAAAK-GKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCG 422 (604)
T ss_pred HHHhcc-CCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc----CCCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.|+++++||+++++++++++++|++++++|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|
T Consensus 423 ~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~ 502 (604)
T PLN02419 423 SEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQA 502 (604)
T ss_pred CCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEec
Confidence 9999999999999999999999999999999999999742 135899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCC--CcchHHHHHhhhh
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG--REKGSYSLSNYLQ 314 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g--~~~g~~~~~~~~~ 314 (328)
+|++||++++|+++|||++||||+|.++++++++++++|.||||+... ..+.+||||+|.||+| +++|.+++++|++
T Consensus 503 ~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~ 582 (604)
T PLN02419 503 NSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQ 582 (604)
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999998643 3478999999999999 7999999999999
Q ss_pred ceEEEEeC
Q 020284 315 VKAVVTAL 322 (328)
Q Consensus 315 ~k~i~~~~ 322 (328)
.|+|+++.
T Consensus 583 ~K~v~~~~ 590 (604)
T PLN02419 583 IKLVTQKQ 590 (604)
T ss_pred eEEEEEcc
Confidence 99998876
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-77 Score=576.71 Aligned_cols=318 Identities=38% Similarity=0.664 Sum_probs=305.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|.++..+++++.++ +|+|++|++++++.+.++.|+.||++|+|.||||+++|+.|+
T Consensus 154 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 232 (472)
T TIGR03374 154 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIL 232 (472)
T ss_pred HHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999985 999999999997778899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 233 ~~aa~~-~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p 311 (472)
T TIGR03374 233 SHTAPS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAP 311 (472)
T ss_pred HHHhhc-ccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCC-CeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~g-a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.++++++||+++..++++++++|++++++| +++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 312 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 391 (472)
T TIGR03374 312 DDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDE 391 (472)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCH
Confidence 999999999999999999999999999999 7999999754446899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+||++++|+++|||++||||+|.++++++++++++|.||||+.....+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 392 ~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 392 EQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999987777889999999999999999999999999999875
Q ss_pred e
Q 020284 321 A 321 (328)
Q Consensus 321 ~ 321 (328)
+
T Consensus 472 ~ 472 (472)
T TIGR03374 472 K 472 (472)
T ss_pred C
Confidence 3
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-77 Score=576.56 Aligned_cols=319 Identities=43% Similarity=0.685 Sum_probs=306.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..|.++|.++|+|+|++++|++++.+.++.|+.||++|+|.||||+.+|+.|+
T Consensus 177 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 256 (498)
T PLN02278 177 ITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLM 256 (498)
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997667889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 257 ~~aa~~-~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p 335 (498)
T PLN02278 257 AGAAAT-VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDG 335 (498)
T ss_pred HHHhhc-CCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..++++++++|++++++|+++++||...+.+|+|+.|||+.++++++.++++|+||||++|++|+|++
T Consensus 336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~d 415 (498)
T PLN02278 336 FEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEE 415 (498)
T ss_pred CCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHH
Confidence 99999999999999999999999999999999999997544468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.+.++++++++++|.||||+.....+.+||||+|.||+|+++|++++++||+.|+|.++
T Consensus 416 eai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 495 (498)
T PLN02278 416 EAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLG 495 (498)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEe
Confidence 99999999999999999999999999999999999999998766567899999999999999999999999999998764
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-77 Score=571.93 Aligned_cols=314 Identities=44% Similarity=0.713 Sum_probs=302.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC-chhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++++ +.+.++.|++||++|.|.||||+.+|+.|
T Consensus 134 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v 213 (448)
T TIGR01780 134 ITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKIL 213 (448)
T ss_pred HHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 46799999999999999999999999999999999999999999999996 57788999999999999999999999999
Q ss_pred HHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 81 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 81 ~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
++.++++ .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 214 ~~~aa~~-~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~ 292 (448)
T TIGR01780 214 MKQSAST-VKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGN 292 (448)
T ss_pred HHHHhhc-CCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCC
Confidence 9998884 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.++++++||++++.++++++++|++++++|+++++||...+..|+|++|||+.++++++.+++||+||||++|++|+|+
T Consensus 293 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~ 372 (448)
T TIGR01780 293 GLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDE 372 (448)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCH
Confidence 99999999999999999999999999999999999999754446899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
+||++++|+++|||+++|||+|.+.++++++++++|.||||+....++.+||||+|.||+|+++|.+++++||+.|
T Consensus 373 ~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 373 EEVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999998766778999999999999999999999999876
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-76 Score=574.60 Aligned_cols=318 Identities=79% Similarity=1.285 Sum_probs=306.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+.++.|++||++|.|.||||+.+|+.|+
T Consensus 158 ~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~ 237 (476)
T cd07142 158 FAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIM 237 (476)
T ss_pred HHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++.+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.+++.++++|+|
T Consensus 238 ~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 317 (476)
T cd07142 238 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDP 317 (476)
T ss_pred HHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99886248999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..+++++++++++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 318 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07142 318 FRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVD 397 (476)
T ss_pred CCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHH
Confidence 99999999999999999999999999999999999998655578999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|||+++|+++|||+++|||+|.+.++++++++++|.|+||+++...+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 398 eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 398 EVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 999999999999999999999999999999999999999998777888999999999999999999999999999885
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-76 Score=574.64 Aligned_cols=320 Identities=64% Similarity=1.072 Sum_probs=307.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|++++.+.+..|+.||++|.|+||||+.+|+.|+
T Consensus 162 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~ 241 (481)
T cd07141 162 AAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241 (481)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++..+++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 242 ~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 321 (481)
T cd07141 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNP 321 (481)
T ss_pred HHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 98876248999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||++++.+++++++++++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 322 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 401 (481)
T cd07141 322 FDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTID 401 (481)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHH
Confidence 99999999999999999999999999999999999998655568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
||++++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 402 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 481 (481)
T cd07141 402 EVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTIK 481 (481)
T ss_pred HHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEEC
Confidence 99999999999999999999999999999999999999999877778999999999999999999999999999998753
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-76 Score=568.63 Aligned_cols=314 Identities=29% Similarity=0.456 Sum_probs=296.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..+++++.+ ++|+|++++|+| +.+.+..|+. +++|+|+||||+.+|+.|+
T Consensus 129 ~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~lp~gvv~vv~G-~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~ 205 (484)
T PLN02174 129 SIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-YLDSSAVRVVEG-AVTETTALLE-QKWDKIFYTGSSKIGRVIM 205 (484)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEEEEC-ChHHHHHHhc-ccCCEEEEECChHHHHHHH
Confidence 578999999999999999999999999999999999 699999999998 4445667776 8899999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHH-hhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~-~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.+++ +++|+++|+|||||+||++|+|++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 206 ~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~ 284 (484)
T PLN02174 206 AAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKN 284 (484)
T ss_pred HHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCC
Confidence 99988 49999999999999999999999999999999999 59999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.+ ++++||++++.++++++++|+++ ++|+++++||.. +..|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 285 p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~-~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 361 (484)
T PLN02174 285 PME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEK-DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNL 361 (484)
T ss_pred Ccc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCc-CCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCH
Confidence 987 88999999999999999999997 788999999975 345899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
+|||+++|+++|||++||||+|.+.++++++++++|.|+||++... .+.+||||+|.||+|+++|.+++++||+.|+|
T Consensus 362 ~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v 441 (484)
T PLN02174 362 EESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAV 441 (484)
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEE
Confidence 9999999999999999999999999999999999999999987544 37889999999999999999999999999999
Q ss_pred EEeC
Q 020284 319 VTAL 322 (328)
Q Consensus 319 ~~~~ 322 (328)
+++.
T Consensus 442 ~~~~ 445 (484)
T PLN02174 442 LYRS 445 (484)
T ss_pred EECC
Confidence 8763
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-76 Score=569.42 Aligned_cols=317 Identities=36% Similarity=0.579 Sum_probs=304.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++.++.++++++|+|+|++|++.+ +.+.+..|+.||++++|+||||+.+|+.|+
T Consensus 140 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~ 218 (457)
T PRK09406 140 VVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVA 218 (457)
T ss_pred HHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999986 445678899999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|
T Consensus 219 ~~a~~~-~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p 297 (457)
T PRK09406 219 AIAGDE-IKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDP 297 (457)
T ss_pred HHHHhc-CCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCC
Confidence 998884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|.+++||+||||++|++|+|++
T Consensus 298 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 377 (457)
T PRK09406 298 TDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADID 377 (457)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHH
Confidence 99999999999999999999999999999999999998655568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
||++++|+++|||+++|||+|.+.++++++++++|.||||+++...+.+||||+|.||+|+++|.+++++||+.|++.+
T Consensus 378 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 378 EAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 9999999999999999999999999999999999999999988778889999999999999999999999999999864
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-76 Score=572.15 Aligned_cols=319 Identities=41% Similarity=0.709 Sum_probs=305.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCch-hHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|.++.+++++|.++|+|+|+++++++++. +.++.|..||++|.|+||||+.+|+.|
T Consensus 156 ~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i 235 (481)
T TIGR03216 156 MTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAI 235 (481)
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 5789999999999999999999999999999999999999999999998554 478889999999999999999999999
Q ss_pred HHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 81 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 81 ~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
++.++++ .+|+++|+|||||+||++|+|+|.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 236 ~~~aa~~-~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~ 314 (481)
T TIGR03216 236 MKAAADG-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGV 314 (481)
T ss_pred HHHHhcC-CCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999884 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-----CCCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
|.++++++||+++..+++++++++++++++|+++++||.... .+|+|++|||+.++++++.+++||+||||++|+
T Consensus 315 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~ 394 (481)
T TIGR03216 315 PDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIA 394 (481)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEE
Confidence 999999999999999999999999999999999999997432 368999999999999999999999999999999
Q ss_pred eecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhc
Q 020284 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 315 (328)
Q Consensus 236 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~ 315 (328)
+|+|.+||++++|+++|||++||||+|.+.++++++++++|.||||+.....+.+||||+|.||+|+++|.+++++||+.
T Consensus 395 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~ 474 (481)
T TIGR03216 395 PFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTEL 474 (481)
T ss_pred EeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhce
Confidence 99999999999999999999999999999999999999999999999877778899999999999999999999999999
Q ss_pred eEEEEe
Q 020284 316 KAVVTA 321 (328)
Q Consensus 316 k~i~~~ 321 (328)
|+++++
T Consensus 475 k~v~~~ 480 (481)
T TIGR03216 475 TNVCIK 480 (481)
T ss_pred EEEEEe
Confidence 999765
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-76 Score=567.72 Aligned_cols=318 Identities=31% Similarity=0.502 Sum_probs=304.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+ ...|+.||++|.|.||||+++|+.|+
T Consensus 143 ~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~ 221 (462)
T PRK13968 143 VMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIG 221 (462)
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999985444 45688999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 222 ~~aa~~-l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p 300 (462)
T PRK13968 222 AQAGAA-LKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDP 300 (462)
T ss_pred HHHhhc-CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..+++++++++++++.+|+++++||......|+|++|||+.++++++.+++||+||||++|++|+|++
T Consensus 301 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~ 380 (462)
T PRK13968 301 RDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAE 380 (462)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHH
Confidence 99999999999999999999999999999999999997544458999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
||++++|+++|||+++|||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+++++||+.|++++.
T Consensus 381 eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 381 HALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred HHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 99999999999999999999999999999999999999999877778899999999999999999999999999999764
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-76 Score=570.83 Aligned_cols=319 Identities=47% Similarity=0.800 Sum_probs=306.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|+++|+|+|++|++++++. .++.|+.||++|.|+||||+.+|+.|.
T Consensus 159 ~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~ 237 (488)
T PRK13252 159 ACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVM 237 (488)
T ss_pred HHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999998655 889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++.. ++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 238 ~~aa~~-l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (488)
T PRK13252 238 AAAAAS-LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDP 316 (488)
T ss_pred HHHhhc-CCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 998884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.++++++||++++.+++++++++++++++|+++++||...+ ..|+|++|||+.++++++.+++||+||||++|++|
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 396 (488)
T PRK13252 317 MDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTF 396 (488)
T ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEee
Confidence 99999999999999999999999999999999999996432 35899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|++||++++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 397 ~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~ 476 (488)
T PRK13252 397 DDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKS 476 (488)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEE
Confidence 99999999999999999999999999999999999999999999876667789999999999999999999999999999
Q ss_pred EEEeC
Q 020284 318 VVTAL 322 (328)
Q Consensus 318 i~~~~ 322 (328)
|++++
T Consensus 477 i~~~~ 481 (488)
T PRK13252 477 VQVEM 481 (488)
T ss_pred EEEeC
Confidence 98874
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-76 Score=525.83 Aligned_cols=320 Identities=42% Similarity=0.677 Sum_probs=308.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC---chhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~---~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
..+|..+||++||+||+||++++|++++.++++.+++|+|+|++|+|+++ ..+.++.|+.+|+++.|.||||+.+|+
T Consensus 176 ItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGK 255 (503)
T KOG2451|consen 176 ITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGK 255 (503)
T ss_pred HHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHH
Confidence 46899999999999999999999999999999999999999999999962 457899999999999999999999999
Q ss_pred HHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhccc
Q 020284 79 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 158 (328)
Q Consensus 79 ~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~ 158 (328)
.++++++.. .|++.+||||+.|+||++|+|+|.|++....++|.++||.|.+++|+|||+++||+|+..|.++++++++
T Consensus 256 iL~~qsast-vKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~v 334 (503)
T KOG2451|consen 256 ILMAQSAST-VKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKV 334 (503)
T ss_pred HHHHhhhhh-hhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheec
Confidence 999999884 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 159 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 159 g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
||.+|+++..||||+..+.++++.++++|+++|+++++||.... -.++|++|||+.+++.+|.+..||+|||+.+|++|
T Consensus 335 GdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kF 414 (503)
T KOG2451|consen 335 GDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKF 414 (503)
T ss_pred cCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeee
Confidence 99999999999999999999999999999999999999999544 44599999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+++||+++++|+++.||+.|+||+|.++..+++++|++|.|.+|.--......||||.|+||+||+++.+|+++|+..|+
T Consensus 415 dteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~ 494 (503)
T KOG2451|consen 415 DTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKY 494 (503)
T ss_pred CCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhhe
Confidence 99999999999999999999999999999999999999999999877778999999999999999999999999999999
Q ss_pred EEEeC
Q 020284 318 VVTAL 322 (328)
Q Consensus 318 i~~~~ 322 (328)
+++..
T Consensus 495 icig~ 499 (503)
T KOG2451|consen 495 ICIGT 499 (503)
T ss_pred eeecC
Confidence 98764
|
|
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-76 Score=569.09 Aligned_cols=319 Identities=40% Similarity=0.686 Sum_probs=307.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|++++++.+.+..|++||++|.|.||||+++|+.|.
T Consensus 155 ~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~ 233 (475)
T PRK13473 155 AAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVL 233 (475)
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999999 999999999997778899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 234 ~~aa~~-~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p 312 (475)
T PRK13473 234 SAAADS-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDP 312 (475)
T ss_pred HHHhhc-CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCC-CeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~g-a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.++++++||+++++++++++++|+++.++| +++++||...+..|+|+.|||+.++++++.++++|+||||++|++|+|+
T Consensus 313 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 392 (475)
T PRK13473 313 DDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDE 392 (475)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCH
Confidence 999999999999999999999999999999 9999999865446899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 393 deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~ 472 (475)
T PRK13473 393 DQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMV 472 (475)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEE
Confidence 99999999999999999999999999999999999999999987777889999999999999999999999999999988
Q ss_pred eC
Q 020284 321 AL 322 (328)
Q Consensus 321 ~~ 322 (328)
+|
T Consensus 473 ~~ 474 (475)
T PRK13473 473 KH 474 (475)
T ss_pred ec
Confidence 75
|
|
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-76 Score=570.45 Aligned_cols=320 Identities=43% Similarity=0.758 Sum_probs=307.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|.++.++.++|.++|+|+|++|++++++.+.++.|+.||++|.|.||||+.+|+.|+
T Consensus 152 ~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~ 231 (488)
T TIGR02299 152 STWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIM 231 (488)
T ss_pred HHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999987777888999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++. ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 232 ~~aa~~-l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p 310 (488)
T TIGR02299 232 RNGADT-LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHP 310 (488)
T ss_pred HHHHhc-CCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-------CCCceecceeeecCCCCCcccCcceecceEEe
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 234 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 234 (328)
.++++.+||++++++++++++++++++++|+++++||...+ .+|+|++|||+.++++++.+++||+||||++|
T Consensus 311 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v 390 (488)
T TIGR02299 311 LDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTV 390 (488)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEE
Confidence 99999999999999999999999999999999999987532 24889999999999999999999999999999
Q ss_pred EeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhh
Q 020284 235 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 314 (328)
Q Consensus 235 ~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~ 314 (328)
++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+++++||+
T Consensus 391 ~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~ 470 (488)
T TIGR02299 391 IPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTE 470 (488)
T ss_pred EeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999877767889999999999999999999999999
Q ss_pred ceEEEEeC
Q 020284 315 VKAVVTAL 322 (328)
Q Consensus 315 ~k~i~~~~ 322 (328)
.|++++++
T Consensus 471 ~k~i~~~~ 478 (488)
T TIGR02299 471 TKNVALAL 478 (488)
T ss_pred eEEEEEec
Confidence 99998875
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-76 Score=568.47 Aligned_cols=319 Identities=47% Similarity=0.832 Sum_probs=306.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..++++++++ +|+|++|++++++.+.++.|++||++|.|.||||+.+|+.|+
T Consensus 153 ~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~ 231 (480)
T cd07559 153 AAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIM 231 (480)
T ss_pred HHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999996 999999999997778899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCC-----CHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~da-----d~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
+.++++ ++|+++|+|||||+||++|+ |++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++
T Consensus 232 ~~aa~~-~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 310 (480)
T cd07559 232 QYAAEN-LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAI 310 (480)
T ss_pred HHHhcc-CCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhC
Confidence 999884 99999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceE
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 232 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 232 (328)
++|+|+|+++++||+++++++++++++|++++++|+++++||...+ ..|+|+.|||+.++++++.++++|+||||+
T Consensus 311 ~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl 390 (480)
T cd07559 311 KVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVL 390 (480)
T ss_pred CCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceE
Confidence 9999999999999999999999999999999999999999997543 368999999999999999999999999999
Q ss_pred EeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 020284 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 312 (328)
Q Consensus 233 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~ 312 (328)
+|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++|
T Consensus 391 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~ 470 (480)
T cd07559 391 AVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHY 470 (480)
T ss_pred EEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998777778899999999999999999999999
Q ss_pred hhceEEEEeC
Q 020284 313 LQVKAVVTAL 322 (328)
Q Consensus 313 ~~~k~i~~~~ 322 (328)
|+.|++++++
T Consensus 471 ~~~k~v~~~~ 480 (480)
T cd07559 471 QQTKNILVSY 480 (480)
T ss_pred hceEEEEEeC
Confidence 9999998753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-75 Score=566.06 Aligned_cols=320 Identities=57% Similarity=0.998 Sum_probs=307.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.||++|.|.||||+.+|+.|+
T Consensus 161 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~ 240 (481)
T cd07143 161 CAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVM 240 (481)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHH
Confidence 47899999999999999999999999999999999999999999999997677889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++.+++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|
T Consensus 241 ~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 320 (481)
T cd07143 241 EAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDP 320 (481)
T ss_pred HHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCC
Confidence 98885348999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..++++++++|++++++|+++++||......|+|+.|||+.++++++.+++||+||||++|++|+|.+
T Consensus 321 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 400 (481)
T cd07143 321 FAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEE 400 (481)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHH
Confidence 99999999999999999999999999999999999998654568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
||++++|.++|||+++|||+|.+.+.++++++++|.|+||++....+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 401 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 401 EAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 99999999999999999999999999999999999999999877778899999999999999999999999999999875
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-75 Score=567.08 Aligned_cols=320 Identities=45% Similarity=0.781 Sum_probs=307.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++++++|+|+|++|++++++.+.++.|+.||++|.|.||||+.+|+.|+
T Consensus 168 ~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~ 247 (503)
T PLN02467 168 ATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIM 247 (503)
T ss_pred HHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 248 ~~aa~~-~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p 326 (503)
T PLN02467 248 TAAAQM-VKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDP 326 (503)
T ss_pred HHHhcc-CCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
.|+++++||+++..+++++++++++++.+|+++++||...+ ..|+|+.|||+.++++++.+++||+||||++|++|+|
T Consensus 327 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~ 406 (503)
T PLN02467 327 LEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFST 406 (503)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCC
Confidence 99999999999999999999999999999999999997532 3589999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
.+||++++|+++|||+++|||+|.+.++++++++++|.||||++....+.+||||+|.||+|+++|.+++++||+.|++.
T Consensus 407 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~ 486 (503)
T PLN02467 407 EDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVT 486 (503)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhCeEEEE
Confidence 99999999999999999999999999999999999999999997766778999999999999999999999999999998
Q ss_pred EeC
Q 020284 320 TAL 322 (328)
Q Consensus 320 ~~~ 322 (328)
+..
T Consensus 487 ~~~ 489 (503)
T PLN02467 487 KYI 489 (503)
T ss_pred Eec
Confidence 864
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-75 Score=560.50 Aligned_cols=316 Identities=38% Similarity=0.596 Sum_probs=303.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++|.++|+|+|+++++++++ +.+..|+.|++++.|.||||+.+|+.|+
T Consensus 113 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~ 191 (429)
T cd07100 113 VFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVA 191 (429)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999944 5678899999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.++++|+|
T Consensus 192 ~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p 270 (429)
T cd07100 192 AEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDP 270 (429)
T ss_pred HHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99888 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
+|+++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.++++++.+++||+||||++|++|+|.+
T Consensus 271 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 350 (429)
T cd07100 271 MDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEE 350 (429)
T ss_pred ccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHH
Confidence 99999999999999999999999999999999999997544458999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 351 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 351 EAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 999999999999999999999999999999999999999998877788999999999999999999999999999875
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-75 Score=565.05 Aligned_cols=318 Identities=48% Similarity=0.811 Sum_probs=305.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|.++..++++++++ +|+|++|+|++++.+.+..|+.||++|.|.||||+.+|+.|.
T Consensus 153 ~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 231 (475)
T cd07117 153 AAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVA 231 (475)
T ss_pred HHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999986 999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|.+++.++++|+|
T Consensus 232 ~~aa~~-~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p 310 (475)
T cd07117 232 IAAAKK-LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNP 310 (475)
T ss_pred HHHhcc-CCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 998884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.++++.+||+++.++++++++++++++++|+++++||.... ..|+|++|||+.++++++.+++||+||||++|++|
T Consensus 311 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~ 390 (475)
T cd07117 311 LDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKF 390 (475)
T ss_pred CCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEE
Confidence 99999999999999999999999999999999999997532 35899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|.+|||+++|+++|||+++|||+|.+.+.++++++++|.|+||+++...+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 391 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~ 470 (475)
T cd07117 391 KTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKN 470 (475)
T ss_pred CCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEE
Confidence 99999999999999999999999999999999999999999999987777889999999999999999999999999999
Q ss_pred EEEe
Q 020284 318 VVTA 321 (328)
Q Consensus 318 i~~~ 321 (328)
++++
T Consensus 471 v~~~ 474 (475)
T cd07117 471 IYID 474 (475)
T ss_pred EEEe
Confidence 9765
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-75 Score=564.30 Aligned_cols=317 Identities=50% Similarity=0.837 Sum_probs=305.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++++++|+|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|+
T Consensus 137 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~ 216 (456)
T cd07110 137 AAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVM 216 (456)
T ss_pred HHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 217 ~~aa~~-~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 295 (456)
T cd07110 217 QAAAQD-IKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDP 295 (456)
T ss_pred HHHhhc-CCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
.++++++||++++.+++++++++++++.+|+++++||.... ..|+|+.|||+.++++++.++++|+||||++|++|+|
T Consensus 296 ~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 375 (456)
T cd07110 296 LEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFAT 375 (456)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCC
Confidence 99999999999999999999999999999999999997543 4688999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
++||++++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 376 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 376 EDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999999999999999999999999997766788999999999999999999999999999874
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-75 Score=566.63 Aligned_cols=320 Identities=45% Similarity=0.779 Sum_probs=307.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|++++++.+.+..|++||++|+|.||||+.+|+.|+
T Consensus 151 ~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~ 230 (482)
T cd07119 151 AAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIM 230 (482)
T ss_pred HHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999987667889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.++++|+|
T Consensus 231 ~~aa~~-~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~ 309 (482)
T cd07119 231 RAAAGN-VKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNG 309 (482)
T ss_pred HHHHhc-CCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.++++++||+++..+++++++++++++++|+++++||.... ..|+|+.|||+.++++++.++++|+||||++|++|
T Consensus 310 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~ 389 (482)
T cd07119 310 LDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERF 389 (482)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEecc
Confidence 99999999999999999999999999999999999997532 25899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|++||++++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+
T Consensus 390 ~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~ 469 (482)
T cd07119 390 DTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKH 469 (482)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEE
Confidence 99999999999999999999999999999999999999999999976677889999999999999999999999999999
Q ss_pred EEEeC
Q 020284 318 VVTAL 322 (328)
Q Consensus 318 i~~~~ 322 (328)
+++++
T Consensus 470 v~~~~ 474 (482)
T cd07119 470 ININL 474 (482)
T ss_pred EEEec
Confidence 98886
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-75 Score=566.79 Aligned_cols=318 Identities=66% Similarity=1.092 Sum_probs=306.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|.++..++++|.++|+|+|++++|++++.+.++.|+.||++|.|.||||+.+|+.|+
T Consensus 158 ~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~ 237 (476)
T cd07091 158 LAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIM 237 (476)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++++++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 238 ~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p 317 (476)
T cd07091 238 EAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDP 317 (476)
T ss_pred HHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCC
Confidence 98887448999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..+++++++++++++++|+++++||......|+|++|||+.++++++.++++|+||||++|++|+|++
T Consensus 318 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07091 318 FDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTED 397 (476)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHH
Confidence 99999999999999999999999999999999999998655578999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
||++++|++++||+++|||+|.+.++++++++++|.|+||+.+...+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 398 eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 398 EVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence 999999999999999999999999999999999999999998777889999999999999999999999999999885
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-75 Score=561.68 Aligned_cols=318 Identities=36% Similarity=0.587 Sum_probs=305.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHH-cCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~-aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|.++..++++|++ +|+|+|++|++++++.+.+..|++||+++.|.||||+.+|+.|
T Consensus 134 ~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i 213 (455)
T cd07120 134 LVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAI 213 (455)
T ss_pred HHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 578999999999999999999999999999999999 7999999999998777788999999999999999999999999
Q ss_pred HHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 81 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 81 ~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
++.++++ ++|+++|+|||||+||++|+|+|.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 214 ~~~aa~~-~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~ 292 (455)
T cd07120 214 MAAAAPT-LKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGP 292 (455)
T ss_pred HHHHHhc-CCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCC
Confidence 9998884 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC---CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
|.|+++++||++++.+++++++++++++++|+++++||...+ ..|+|++|||+.++++++.++++|+||||++|++|
T Consensus 293 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~ 372 (455)
T cd07120 293 GLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETF 372 (455)
T ss_pred CCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeec
Confidence 999999999999999999999999999999999999876433 25899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|++||++++|.++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+
T Consensus 373 ~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~ 452 (455)
T cd07120 373 DDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKH 452 (455)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeE
Confidence 99999999999999999999999999999999999999999999987777889999999999999999999999999999
Q ss_pred EEE
Q 020284 318 VVT 320 (328)
Q Consensus 318 i~~ 320 (328)
+++
T Consensus 453 v~~ 455 (455)
T cd07120 453 IYL 455 (455)
T ss_pred EeC
Confidence 853
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-75 Score=565.47 Aligned_cols=318 Identities=38% Similarity=0.502 Sum_probs=302.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..++++|+++|+|+|+++++++ +.+.+..|++||++|.|.||||+.+|+.|+
T Consensus 153 ~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~ 231 (478)
T cd07085 153 PLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIY 231 (478)
T ss_pred HHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999998 566788999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 232 ~~aa~~-~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p 310 (478)
T cd07085 232 ERAAAN-GKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAG 310 (478)
T ss_pred HHHhhc-CCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCC
Confidence 988874 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.++++++||++++.++++++++|++++++|+++++||.... .+|+|+.|||+.++++++.++++|+||||++|++|
T Consensus 311 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 390 (478)
T cd07085 311 DDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRV 390 (478)
T ss_pred CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEe
Confidence 99999999999999999999999999999999999997432 35899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhh
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQ 314 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g--~~~g~~~~~~~~~ 314 (328)
+|++||++++|+++|||+++|||+|.+.++++++++++|.||||++... .+.+||||+|.||+| +++|.+++++||+
T Consensus 391 ~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~ 470 (478)
T cd07085 391 DTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQ 470 (478)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999987443 467999999999999 5789999999999
Q ss_pred ceEEEEe
Q 020284 315 VKAVVTA 321 (328)
Q Consensus 315 ~k~i~~~ 321 (328)
.|+++++
T Consensus 471 ~k~v~~~ 477 (478)
T cd07085 471 TKTVTSR 477 (478)
T ss_pred eEEEEEe
Confidence 9999865
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-75 Score=566.16 Aligned_cols=319 Identities=53% Similarity=0.886 Sum_probs=306.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+|++++.+.++.|+.||++|.|.||||+.+|+.|+
T Consensus 161 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~ 240 (484)
T cd07144 161 AAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVM 240 (484)
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh-cccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~-~~~g~ 160 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.+ +++|+
T Consensus 241 ~~a~~-~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~ 319 (484)
T cd07144 241 KAAAQ-NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGS 319 (484)
T ss_pred HHHHh-cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCC
Confidence 98888 48999999999999999999999999999999999999999999999999999999999999999985 89999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC---CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
|.++++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.++++++.+++||+||||++|++|
T Consensus 320 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 399 (484)
T cd07144 320 PFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKF 399 (484)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEecc
Confidence 999999999999999999999999999999999999987543 35899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++++++||+.|+
T Consensus 400 ~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~ 479 (484)
T cd07144 400 KTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKA 479 (484)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999987777889999999999999999999999999999
Q ss_pred EEEe
Q 020284 318 VVTA 321 (328)
Q Consensus 318 i~~~ 321 (328)
+.++
T Consensus 480 v~~~ 483 (484)
T cd07144 480 VHIN 483 (484)
T ss_pred EEEe
Confidence 9875
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-75 Score=564.18 Aligned_cols=317 Identities=44% Similarity=0.730 Sum_probs=303.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|+.||++|.|.||||+.+|+.|+
T Consensus 152 ~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 231 (473)
T cd07097 152 PAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIA 231 (473)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 232 ~~aa~~-~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 310 (473)
T cd07097 232 AAAAAR-GARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDA 310 (473)
T ss_pred HHHhcc-CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
.|+++++||++++.+++++++++++++++|+++++||...+ ..|+|+.|||+.++++++.+++||+||||++|++|+|
T Consensus 311 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 390 (473)
T cd07097 311 LDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRD 390 (473)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCC
Confidence 99999999999999999999999999999999999997543 3588999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCC-CcchHHHHHhhhhceE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKA 317 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g-~~~g~~~~~~~~~~k~ 317 (328)
++||++++|+++|||+++|||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+| +++|.+++++||+.|+
T Consensus 391 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~ 470 (473)
T cd07097 391 YDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKT 470 (473)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeE
Confidence 9999999999999999999999999999999999999999998654 3478999999999999 8999999999999999
Q ss_pred EE
Q 020284 318 VV 319 (328)
Q Consensus 318 i~ 319 (328)
+.
T Consensus 471 v~ 472 (473)
T cd07097 471 VY 472 (473)
T ss_pred Ee
Confidence 85
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-75 Score=560.56 Aligned_cols=319 Identities=52% Similarity=0.896 Sum_probs=307.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++|+++|+|+|+++++++++.+.++.|+.||++|.|+||||+.+|+.|+
T Consensus 134 ~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~ 213 (453)
T cd07115 134 AAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIM 213 (453)
T ss_pred HHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 214 ~~aa~-~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 292 (453)
T cd07115 214 QGAAG-NLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDP 292 (453)
T ss_pred HHHhh-cCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCC
Confidence 99888 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||++++.++++++++|+++.++|+++++||......|+|++|||+.++++++.+++||+||||++|++|+|++
T Consensus 293 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 372 (453)
T cd07115 293 LDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEE 372 (453)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHH
Confidence 99999999999999999999999999999999999997544468899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
||++++|+++|||+++|||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus 373 eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 373 EALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999999877788999999999999999999999999999999765
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-75 Score=561.29 Aligned_cols=318 Identities=43% Similarity=0.703 Sum_probs=304.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|++++++.+.++.|++||++++|.||||+++|+.|+
T Consensus 133 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~ 211 (456)
T cd07107 133 AAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIM 211 (456)
T ss_pred HHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 5689999999999999999999999999999999996 999999999997677889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHH-HhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~-~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.+++ +++|+++|+|||||+||++|+|++.|++.+++++ |.++||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 212 ~~aa~-~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~ 290 (456)
T cd07107 212 RAAAE-GIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGD 290 (456)
T ss_pred HHHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence 99888 4899999999999999999999999999999995 899999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
|.++++++||+++..++++++++|+++.++|+++++||.... ..|+|++|||+.++++++.+++||+||||++|++
T Consensus 291 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~ 370 (456)
T cd07107 291 PTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLR 370 (456)
T ss_pred CCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEe
Confidence 999999999999999999999999999999999999997532 3589999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
|+|++||++++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|
T Consensus 371 ~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k 450 (456)
T cd07107 371 WRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEK 450 (456)
T ss_pred eCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999998777788999999999999999999999999999
Q ss_pred EEEEe
Q 020284 317 AVVTA 321 (328)
Q Consensus 317 ~i~~~ 321 (328)
++.++
T Consensus 451 ~v~~~ 455 (456)
T cd07107 451 NVNVR 455 (456)
T ss_pred EEEEe
Confidence 99875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-75 Score=563.65 Aligned_cols=318 Identities=31% Similarity=0.521 Sum_probs=302.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHH----HHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALY----VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~----l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|+++.. +.+++.++|+|+|++|++++ +.+.+..|+.||++|+|.||||+++|
T Consensus 171 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G 249 (508)
T PLN02315 171 LGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVG 249 (508)
T ss_pred HHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHH
Confidence 57899999999999999999999999887 67888999999999999998 77788999999999999999999999
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+.|++.++++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|.+++++++
T Consensus 250 ~~v~~~aa~~-~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 328 (508)
T PLN02315 250 LMVQQTVNAR-FGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVK 328 (508)
T ss_pred HHHHHHHHhc-CCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcC
Confidence 9999988874 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
+|+|.++++.+||+++..+++++++++++++++|+++++||...+..|+|++|||+ ++++++.+++||+||||++|++|
T Consensus 329 vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~ 407 (508)
T PLN02315 329 IGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKF 407 (508)
T ss_pred CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEe
Confidence 99999999999999999999999999999999999999999765556899999999 58999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHH--hcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhh
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR--ALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQ 314 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~--~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~ 314 (328)
+|++||++++|+++|||+++|||+|.+.++++++ ++++|.||||+.... .+.+||||+|.||+|+++|.+++++||+
T Consensus 408 ~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~ 487 (508)
T PLN02315 408 KTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhh
Confidence 9999999999999999999999999999999985 799999999985443 4789999999999999999999999999
Q ss_pred ceEEEEeC
Q 020284 315 VKAVVTAL 322 (328)
Q Consensus 315 ~k~i~~~~ 322 (328)
.|++++++
T Consensus 488 ~k~v~~~~ 495 (508)
T PLN02315 488 RSTCTINY 495 (508)
T ss_pred EEEEEEec
Confidence 99988875
|
|
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-75 Score=559.79 Aligned_cols=317 Identities=48% Similarity=0.795 Sum_probs=306.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++|+++|+|+|+++++++++.+.+..|+.||++|.|.||||+++|+.|.
T Consensus 136 ~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 215 (454)
T cd07118 136 LSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIA 215 (454)
T ss_pred HHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999997667889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|+|++.|++.+++++|+++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 216 ~~aa~~-~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p 294 (454)
T cd07118 216 AAAARN-LKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDP 294 (454)
T ss_pred HHHHhc-CCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.++++++||++++.++++++++|++++++|+++++||...+ ..|+|++|||+.++++++.+++||+||||++|++|+|+
T Consensus 295 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 374 (454)
T cd07118 295 LDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTV 374 (454)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCH
Confidence 99999999999999999999999999999999999998654 46899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
+||++++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|++.
T Consensus 375 ~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 375 DEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999999999998777889999999999999999999999999999875
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-75 Score=558.94 Aligned_cols=315 Identities=47% Similarity=0.758 Sum_probs=303.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++++++ +|+|+++++++ +.+.+..|++|+++|.|.||||+.+|+.|+
T Consensus 131 ~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~ 208 (446)
T cd07106 131 AAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVM 208 (446)
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999996 99999999998 556889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 209 ~~aa~-~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p 287 (446)
T cd07106 209 ASAAK-TLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDG 287 (446)
T ss_pred HHHHh-cCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCC
Confidence 99888 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||++++.++++++++++++..+|+++++||......|+|+.|||+.++++++.++++|+||||++|++|+|++
T Consensus 288 ~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~ 367 (446)
T cd07106 288 LDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDED 367 (446)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHH
Confidence 99999999999999999999999999999999999997654468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
||++++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|++.
T Consensus 368 eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 368 EVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 999999999999999999999999999999999999999998877889999999999999999999999999999875
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-75 Score=560.59 Aligned_cols=318 Identities=34% Similarity=0.565 Sum_probs=299.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~----l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|.++..++++ |.++|+|+|++|++++ +.+.++.|++||++|+|.||||+++|
T Consensus 149 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g-~~~~~~~L~~~~~vd~V~fTGs~~~g 227 (474)
T cd07130 149 WGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVG 227 (474)
T ss_pred HHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeC-ChhHHHHHhcCCCCCEEEEECchHHH
Confidence 468999999999999999999999999887766 5688999999999998 45678999999999999999999999
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+.|++.++++ .+|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++++
T Consensus 228 ~~i~~~aa~~-~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 306 (474)
T cd07130 228 RQVGQAVAAR-FGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVR 306 (474)
T ss_pred HHHHHHHHhc-CCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCC
Confidence 9999998884 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
+|+|.++++++||+++..+++++++++++++++|+++++||...+.+|+|++|||+.++++ |.+++||+||||++|++|
T Consensus 307 ~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~ 385 (474)
T cd07130 307 IGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKF 385 (474)
T ss_pred cCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEe
Confidence 9999999999999999999999999999999999999999986544689999999987766 999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHh--cceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhh
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA--LRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQ 314 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~--l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g~~~g~~~~~~~~~ 314 (328)
+|++||++++|+++|||+++|||+|.+.+++++++ +++|.||||..+. ..+.+||||+|.||+|+++|++++++||+
T Consensus 386 ~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~ 465 (474)
T cd07130 386 DTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMR 465 (474)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhh
Confidence 99999999999999999999999999999999987 8999999998654 35789999999999999999999999999
Q ss_pred ceEEEEeC
Q 020284 315 VKAVVTAL 322 (328)
Q Consensus 315 ~k~i~~~~ 322 (328)
.|++.+++
T Consensus 466 ~k~~~~~~ 473 (474)
T cd07130 466 RSTCTINY 473 (474)
T ss_pred eEEEEEec
Confidence 99988763
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-75 Score=560.05 Aligned_cols=316 Identities=42% Similarity=0.683 Sum_probs=303.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~-~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
.++++++||++||+||+|||+.+|.++ ..+.++++++|+|+|++|++++++.+.+..|++||.++.|.||||+.+|+.|
T Consensus 147 ~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i 226 (465)
T cd07151 147 SMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHI 226 (465)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 468999999999999999999999997 6899999999999999999998777788999999999999999999999999
Q ss_pred HHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 81 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 81 ~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
++.+++ +.+|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+
T Consensus 227 ~~~aa~-~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~ 305 (465)
T cd07151 227 GELAGR-HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGD 305 (465)
T ss_pred HHHHHh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCC
Confidence 999988 4999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.++++.+||+++.++++++++++++++++|+++++||.. .|+|++|||+.++++++.+++||+||||++|++|+|+
T Consensus 306 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 382 (465)
T cd07151 306 PSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDE 382 (465)
T ss_pred CCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCH
Confidence 9999999999999999999999999999999999999863 5889999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
+||++++|+++|||+++|||+|.++++++++++++|.|+||+++.. .+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 383 ~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~ 462 (465)
T cd07151 383 EEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWIS 462 (465)
T ss_pred HHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999999997654 478999999999999999999999999999998
Q ss_pred Ee
Q 020284 320 TA 321 (328)
Q Consensus 320 ~~ 321 (328)
++
T Consensus 463 ~~ 464 (465)
T cd07151 463 VQ 464 (465)
T ss_pred ec
Confidence 75
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-74 Score=560.22 Aligned_cols=319 Identities=38% Similarity=0.614 Sum_probs=304.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~a----glp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|.++..++++++++ |+|+|+++++++++. .+..|..||++|.|.||||+.+|
T Consensus 150 ~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g 228 (478)
T cd07086 150 PGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVG 228 (478)
T ss_pred HHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHH
Confidence 5689999999999999999999999999999999999 999999999998544 88899999999999999999999
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+.|++.++++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++++
T Consensus 229 ~~i~~~aa~~-~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 307 (478)
T cd07086 229 RRVGETVARR-FGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVR 307 (478)
T ss_pred HHHHHHHhcc-CCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCC
Confidence 9999999884 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCC--CCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
+|+|.++++++||+++..+++++++++++++++|+++++||..... .|+|++|||+.++++++.++++|+||||++|+
T Consensus 308 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~ 387 (478)
T cd07086 308 IGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVI 387 (478)
T ss_pred cCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEE
Confidence 9999999999999999999999999999999999999999975432 58899999999999999999999999999999
Q ss_pred eecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHh--cceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhh
Q 020284 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA--LRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNY 312 (328)
Q Consensus 236 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~--l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~ 312 (328)
+|+|++||++++|+++|||+++|||+|.+.+++++++ +++|+|+||++... .+.+||||+|.||+|+++|.+++++|
T Consensus 388 ~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f 467 (478)
T cd07086 388 KFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQY 467 (478)
T ss_pred EeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHh
Confidence 9999999999999999999999999999999999999 99999999987553 57899999999999999999999999
Q ss_pred hhceEEEEeC
Q 020284 313 LQVKAVVTAL 322 (328)
Q Consensus 313 ~~~k~i~~~~ 322 (328)
++.|+|++++
T Consensus 468 ~~~k~i~~~~ 477 (478)
T cd07086 468 MRRSTCTINY 477 (478)
T ss_pred hceEEEEEeC
Confidence 9999998764
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-74 Score=557.73 Aligned_cols=314 Identities=34% Similarity=0.523 Sum_probs=299.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|+++|+|+|+++++++ +.+.++.|++||++|.|.||||+++|+.|+
T Consensus 141 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~ 219 (455)
T cd07148 141 IVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEGWCQAVPC-ENAVAEKLVTDPRVAFFSFIGSARVGWMLR 219 (455)
T ss_pred HHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHcCCCcCcEEEEeC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999998 456789999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++. .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 220 ~~aa~--~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 297 (455)
T cd07148 220 SKLAP--GTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDP 297 (455)
T ss_pred HHhhc--CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCC
Confidence 98875 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..+++++++++++++++|+++++||... .+.|++|||+.++++++.+++||+||||++|++|+|++
T Consensus 298 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 375 (455)
T cd07148 298 TDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLD 375 (455)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHH
Confidence 9999999999999999999999999999999999999754 47899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCC-CCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
||++++|+++|||+++|||+|.+.++++++++++|.|+||++.... +.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 376 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 376 EAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 9999999999999999999999999999999999999999876443 568999999999999999999999999998853
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-74 Score=558.27 Aligned_cols=315 Identities=36% Similarity=0.584 Sum_probs=300.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|+++|+|+|++|++++++.+.+..|++||+++.|.||||+.+|+.|+
T Consensus 156 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 235 (472)
T TIGR03250 156 VAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIA 235 (472)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997677889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ .+|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 236 ~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 312 (472)
T TIGR03250 236 ARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDP 312 (472)
T ss_pred HHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCC
Confidence 8763 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++.++++++++++++++++|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|++
T Consensus 313 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 389 (472)
T TIGR03250 313 MDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDID 389 (472)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHH
Confidence 999999999999999999999999999999999999864 58999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCC-CCCCccCCCCCCCC-CcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~~~SG~g-~~~g~~~~~~~~~~k~i~ 319 (328)
||++++|+++|||++||||+|.+.++++++++++|.||||+.+... +.+||||+|.||+| +.+|.+++++||+.|++.
T Consensus 390 eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~ 469 (472)
T TIGR03250 390 DAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYS 469 (472)
T ss_pred HHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999999876443 56899999999999 667799999999999998
Q ss_pred EeC
Q 020284 320 TAL 322 (328)
Q Consensus 320 ~~~ 322 (328)
+++
T Consensus 470 ~~~ 472 (472)
T TIGR03250 470 LPW 472 (472)
T ss_pred EeC
Confidence 763
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-74 Score=557.70 Aligned_cols=316 Identities=41% Similarity=0.696 Sum_probs=303.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++++++|+|+|+++++++++.+.++.|++||+++.|.||||+.+|+.|+
T Consensus 140 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~ 219 (456)
T cd07145 140 FAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIA 219 (456)
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 220 ~~aa~~-~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 298 (456)
T cd07145 220 SKAGGT-GKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDP 298 (456)
T ss_pred HHHhhc-CCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..+++++++++++++++|+++++||... .|+|+.|||+.++++++.++++|+||||++|++|+|++
T Consensus 299 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 376 (456)
T cd07145 299 LDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDE 376 (456)
T ss_pred CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHH
Confidence 9999999999999999999999999999999999998753 38999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
||++++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+|+++|++|+++|++.|++.+
T Consensus 377 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 377 EAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 999999999999999999999999999999999999999987654 3679999999999999999999999999998853
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-74 Score=557.97 Aligned_cols=318 Identities=51% Similarity=0.856 Sum_probs=305.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|.++|+|+|+++++++++.+.+..|+.|+++|.|.||||+++|+.|+
T Consensus 141 ~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~ 220 (462)
T cd07112 141 AAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFL 220 (462)
T ss_pred HHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCC-CHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~da-d~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.+++.+++|+++|+||+||+||++|+ |++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 221 ~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~ 300 (462)
T cd07112 221 EYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGD 300 (462)
T ss_pred HHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCC
Confidence 988843489999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
|.++++++||+++..++++++++|++++++|+++++||.... ..|+|+.|||+.++++++.+++||+||||++|++|+
T Consensus 301 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~ 380 (462)
T cd07112 301 PLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFD 380 (462)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeC
Confidence 999999999999999999999999999999999999987532 258899999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
|.+||++++|+++|||+++|||+|.+.++++++++++|.|+||+++...+.+||||+|.||+|+++|.+++++||+.|++
T Consensus 381 ~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i 460 (462)
T cd07112 381 SEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTT 460 (462)
T ss_pred CHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999999999877778899999999999999999999999999988
Q ss_pred E
Q 020284 319 V 319 (328)
Q Consensus 319 ~ 319 (328)
.
T Consensus 461 ~ 461 (462)
T cd07112 461 W 461 (462)
T ss_pred E
Confidence 5
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-74 Score=563.25 Aligned_cols=318 Identities=31% Similarity=0.485 Sum_probs=300.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+.++++||| +||+||+|||+.+|+++..++++|.++|+|+|+||++++++.+.+..|+.||++++|.||||+++|+.|+
T Consensus 187 ~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~ 265 (522)
T cd07123 187 GNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLW 265 (522)
T ss_pred HHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 567899999 5999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCC------cceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh
Q 020284 82 QLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 155 (328)
Q Consensus 82 ~~~a~~~~~------~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 155 (328)
+.++++ ++ |+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++
T Consensus 266 ~~aa~~-l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 344 (522)
T cd07123 266 KQIGEN-LDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKE 344 (522)
T ss_pred HHHHhh-cccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhh
Confidence 998874 66 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccCCHHHHHHHHHHHHHHHhC-CCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEe
Q 020284 156 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 234 (328)
Q Consensus 156 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 234 (328)
+++|+|.|+++++||+++.++++++++++++++++ |+++++||......|+|++|||+.++++++.+++||+||||++|
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V 424 (522)
T cd07123 345 IKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTV 424 (522)
T ss_pred CccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEE
Confidence 99999999999999999999999999999999999 99999999754346899999999999999999999999999999
Q ss_pred EeecC--hhHHHHHhhcCC-CCceEEEecCCHHHHHHHHHhc--ceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchH
Q 020284 235 LKYKD--LDEVIQRSNASQ-YGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGS 306 (328)
Q Consensus 235 ~~~~~--~~eai~~~n~~~-~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~ 306 (328)
++|++ ++|||+++|++. |||++||||+|.+.++++++++ ++|.||||+.... .+.+||||+|.||+| +++|+
T Consensus 425 ~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~ 504 (522)
T cd07123 425 YVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSP 504 (522)
T ss_pred EEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCH
Confidence 99995 799999999985 9999999999999999999996 5999999986543 367999999999995 99999
Q ss_pred HHHHhhhhceEEEEe
Q 020284 307 YSLSNYLQVKAVVTA 321 (328)
Q Consensus 307 ~~~~~~~~~k~i~~~ 321 (328)
+++++|++.|++.+.
T Consensus 505 ~~l~~~~~~k~~~~~ 519 (522)
T cd07123 505 LNLLRWVSPRTIKET 519 (522)
T ss_pred HHHHHhcceEEEEEe
Confidence 999999999998765
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-74 Score=556.78 Aligned_cols=318 Identities=48% Similarity=0.820 Sum_probs=304.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++++ .+.++.|+.|+++|+|.||||+.+|+.|+
T Consensus 133 ~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~aGlP~g~~~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 211 (457)
T cd07090 133 ASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGG-GETGQLLCEHPDVAKVSFTGSVPTGKKVM 211 (457)
T ss_pred HHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHcCCCcccEEEEeCC-hhhHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999984 46888999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 212 ~~aa~-~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 290 (457)
T cd07090 212 SAAAK-GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDP 290 (457)
T ss_pred HHHhc-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99888 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-----CCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
.++++++||+++.++++++.++|++++++|+++++||.... ..|+|++|||+.++++++.++++|+||||++|++
T Consensus 291 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~ 370 (457)
T cd07090 291 LDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILP 370 (457)
T ss_pred CCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEE
Confidence 99999999999999999999999999999999999997532 2588999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+++++||+.|
T Consensus 371 ~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k 450 (457)
T cd07090 371 FDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLK 450 (457)
T ss_pred ECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeE
Confidence 99999999999999999999999999999999999999999999998777788999999999999999999999999999
Q ss_pred EEEEe
Q 020284 317 AVVTA 321 (328)
Q Consensus 317 ~i~~~ 321 (328)
++.++
T Consensus 451 ~~~~~ 455 (457)
T cd07090 451 TVYVE 455 (457)
T ss_pred EEEEe
Confidence 98764
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-74 Score=556.12 Aligned_cols=316 Identities=43% Similarity=0.707 Sum_probs=302.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++++++|+|+|++|++++++.+.++.|++||++|.|.||||+.+|+.|.
T Consensus 134 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 213 (454)
T cd07109 134 TGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVM 213 (454)
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999987778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 214 ~~aa~~-~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p 292 (454)
T cd07109 214 RAAAEN-VVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPG 292 (454)
T ss_pred HHHhhc-CCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC---CCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
.+ .+++||++++++++++++++++++++|+++++||.... ..|+|+.|||+.++++++.+++||+||||++|++|+
T Consensus 293 ~~-~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~ 371 (454)
T cd07109 293 LE-DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFD 371 (454)
T ss_pred cc-cCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecC
Confidence 86 68999999999999999999999999999999987432 368999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCC-CCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD-VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~-~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
|++||++++|+++|||+++|||+|.+.++++++++++|.|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 372 ~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~ 451 (454)
T cd07109 372 DEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKT 451 (454)
T ss_pred CHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeE
Confidence 9999999999999999999999999999999999999999999976 456789999999999999999999999999998
Q ss_pred EE
Q 020284 318 VV 319 (328)
Q Consensus 318 i~ 319 (328)
+.
T Consensus 452 i~ 453 (454)
T cd07109 452 VA 453 (454)
T ss_pred Ee
Confidence 85
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-74 Score=555.90 Aligned_cols=317 Identities=45% Similarity=0.699 Sum_probs=305.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.+..|+.||+++.|.||||+.+|+.|+
T Consensus 140 ~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~ 219 (459)
T cd07089 140 NLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIM 219 (459)
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 220 ~~aa~~-~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p 298 (459)
T cd07089 220 AQAAAT-LKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDP 298 (459)
T ss_pred HHHHhc-CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
.++++++||+++..+++++++++++++++|+++++||.... ..|+|+.|||+.++++++.+++||+||||++|++|+|
T Consensus 299 ~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 378 (459)
T cd07089 299 ADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDD 378 (459)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCC
Confidence 99999999999999999999999999999999999997543 3689999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
++||++++|+++|||+++|||+|.+.++++++++++|.|+||+....++.+||||+|.||+|+++|++++++||+.|++.
T Consensus 379 ~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 379 DDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 99999999999999999999999999999999999999999998877888999999999999999999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-74 Score=555.53 Aligned_cols=315 Identities=40% Similarity=0.598 Sum_probs=300.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+++++++++.+.+..|++| +|.|.||||+++|+.|+
T Consensus 135 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~ 212 (454)
T cd07101 135 AVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVA 212 (454)
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999777888999987 68899999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 213 ~~aa~~-~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~ 291 (454)
T cd07101 213 ERAGRR-LIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAA 291 (454)
T ss_pred HHHHhc-CCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.++++++||+++.++++++++++++++++|+++++||...+ ..|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 292 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 371 (454)
T cd07101 292 LDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADD 371 (454)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCH
Confidence 99999999999999999999999999999999999986432 35789999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC---CCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV---FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~---~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+||++++|+++|||+++|||+|.+.++++++++++|.||||++.. ..+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 372 ~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~ 451 (454)
T cd07101 372 DEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQT 451 (454)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEE
Confidence 999999999999999999999999999999999999999998643 35789999999999999999999999999998
Q ss_pred EE
Q 020284 318 VV 319 (328)
Q Consensus 318 i~ 319 (328)
++
T Consensus 452 v~ 453 (454)
T cd07101 452 VA 453 (454)
T ss_pred Ee
Confidence 86
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-74 Score=557.74 Aligned_cols=314 Identities=47% Similarity=0.823 Sum_probs=302.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++++.+.++.|+.||++|+|.||||+++|+.|+
T Consensus 150 ~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~ 229 (467)
T TIGR01804 150 ASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIM 229 (467)
T ss_pred HHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999986678889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 230 ~~a~~~-l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 308 (467)
T TIGR01804 230 AAAADH-LKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDG 308 (467)
T ss_pred HHHHhc-CCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.++++.+||+++..+++++++++++++++|+++++||.... ..|+|+.|||+.++++++.+++||+||||++|++|
T Consensus 309 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 388 (467)
T TIGR01804 309 FDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTF 388 (467)
T ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEec
Confidence 99999999999999999999999999999999999997532 25889999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
+|++||++++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++||+.|
T Consensus 389 ~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 389 SSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999998777788999999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-74 Score=554.67 Aligned_cols=316 Identities=36% Similarity=0.560 Sum_probs=304.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|.++|+++|+|+|++|++++++ +.+..|+.||++|.|.||||+++|+.|+
T Consensus 133 ~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~ 211 (452)
T cd07102 133 AVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQ 211 (452)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999955 7889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +.+|+.+|+|||||+||++|||++.|++.+++++|+++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 212 ~~a~~-~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p 290 (452)
T cd07102 212 RAAAG-RFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDP 290 (452)
T ss_pred HHHHh-cCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 98887 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc---CCCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
.++++++||+++..+++++++++++++.+|+++++||... +..|+|+.|||+.++++++.++++|+||||++|++|+
T Consensus 291 ~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 370 (452)
T cd07102 291 LDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVK 370 (452)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeC
Confidence 9999999999999999999999999999999999998753 2468999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
|++||++++|.++|||+++|||+|.+.++++++++++|+|+||++....+..||||+|+||+|+++|.+++++||+.|++
T Consensus 371 ~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~ 450 (452)
T cd07102 371 SDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSY 450 (452)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999999999877778899999999999999999999999999998
Q ss_pred E
Q 020284 319 V 319 (328)
Q Consensus 319 ~ 319 (328)
+
T Consensus 451 ~ 451 (452)
T cd07102 451 H 451 (452)
T ss_pred e
Confidence 5
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-74 Score=557.06 Aligned_cols=317 Identities=43% Similarity=0.702 Sum_probs=304.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|+++|+|+|++|++++++.+.++.|+.||++|.|.||||+.+|+.|+
T Consensus 150 ~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 229 (468)
T cd07088 150 IARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIM 229 (468)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999997677889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 230 ~~aa~~-~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 308 (468)
T cd07088 230 EAAAEN-ITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDP 308 (468)
T ss_pred HHHHhc-CCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.++++.+||+++..+++++++++++++++|+++++||.... ..|+|++|||+.++++++.++++|+||||++|++|+|+
T Consensus 309 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 388 (468)
T cd07088 309 FDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSL 388 (468)
T ss_pred CCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCH
Confidence 99999999999999999999999999999999999997543 36899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
+||++++|+++|||+++|||+|.+.++++++++++|.||||++....+..||||+|.||+|+++|++++++||+.|++.
T Consensus 389 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 389 DEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999999999998766667799999999999999999999999999885
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-74 Score=556.98 Aligned_cols=320 Identities=45% Similarity=0.741 Sum_probs=305.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++++.+.+..|++||++|.|+||||+.+|+.|+
T Consensus 152 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~ 231 (478)
T cd07131 152 PSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIG 231 (478)
T ss_pred HHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +.+|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 232 ~~aa~-~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p 310 (478)
T cd07131 232 ETCAR-PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDG 310 (478)
T ss_pred HHHhh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCC
Confidence 99988 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.++++++||++++.+++++++++++++++|+++++||...+ ..|+|+.|||+.++++++.++++|+||||++|++|
T Consensus 311 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~ 390 (478)
T cd07131 311 LDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEV 390 (478)
T ss_pred CCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEe
Confidence 99999999999999999999999999999999999997532 35899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhhc
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYLQV 315 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g-~~~g~~~~~~~~~~ 315 (328)
+|++||++++|+++|||+++|||+|.+.++++++++++|.|+||++... .+.+||||+|.||+| +++|.+++++||+.
T Consensus 391 ~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~ 470 (478)
T cd07131 391 SSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEW 470 (478)
T ss_pred CCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhhe
Confidence 9999999999999999999999999999999999999999999987653 578999999999999 88899999999999
Q ss_pred eEEEEeC
Q 020284 316 KAVVTAL 322 (328)
Q Consensus 316 k~i~~~~ 322 (328)
|+|++++
T Consensus 471 k~i~~~~ 477 (478)
T cd07131 471 KAVYVDY 477 (478)
T ss_pred EEEEEeC
Confidence 9998763
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-74 Score=560.99 Aligned_cols=319 Identities=31% Similarity=0.472 Sum_probs=300.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+.+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|++++++.+.++.|+.||++++|.||||+.+|+.|+
T Consensus 187 ~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~ 265 (533)
T TIGR01236 187 GNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW 265 (533)
T ss_pred HHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 467889999 7999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCC------cceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh
Q 020284 82 QLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 155 (328)
Q Consensus 82 ~~~a~~~~~------~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 155 (328)
+.++++ ++ ++++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++
T Consensus 266 ~~aa~~-l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 344 (533)
T TIGR01236 266 KWVASN-LDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAE 344 (533)
T ss_pred HHHHhh-ccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhc
Confidence 998884 65 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCC--CeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEE
Q 020284 156 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG--AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233 (328)
Q Consensus 156 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~g--a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 233 (328)
+++|+|.|+++++||+++..++++++++++++.++| +++++||......|+|++|||+.++++++.+++||+||||++
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~ 424 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT 424 (533)
T ss_pred CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence 999999999999999999999999999999999987 799999875444689999999999999999999999999999
Q ss_pred eEeecC--hhHHHHHh-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCCCCC--CCCCCccCCCCCCCC-Ccch
Q 020284 234 ILKYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVF--DAAIPFGGYKQSGQG-REKG 305 (328)
Q Consensus 234 v~~~~~--~~eai~~~-n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g 305 (328)
|++|+| ++||++++ |+++|||+++|||+|.+.+.+++++++ +|.||||+.... .+.+||||+|.||+| +++|
T Consensus 425 v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g 504 (533)
T TIGR01236 425 VYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGG 504 (533)
T ss_pred EEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCC
Confidence 999998 49999999 889999999999999999999999977 999999976543 468999999999998 9999
Q ss_pred HHHHHhhhhceEEEEeC
Q 020284 306 SYSLSNYLQVKAVVTAL 322 (328)
Q Consensus 306 ~~~~~~~~~~k~i~~~~ 322 (328)
.+++++|++.|++.+..
T Consensus 505 ~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 505 PLNLLRWTSARSIKETF 521 (533)
T ss_pred HHHHHHhcceEEEEEEc
Confidence 99999999999998764
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-74 Score=560.77 Aligned_cols=320 Identities=42% Similarity=0.635 Sum_probs=304.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.+..|+.||++|.|.||||+.+|+.|+
T Consensus 183 ~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~ 262 (512)
T cd07124 183 LAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIY 262 (512)
T ss_pred HHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHH
Confidence 47899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhC-----CCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 82 QLAAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 82 ~~~a~~-----~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
+.+++. +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++
T Consensus 263 ~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~ 342 (512)
T cd07124 263 ERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKAL 342 (512)
T ss_pred HHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhC
Confidence 988862 489999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCC--CCceecceeeecCCCCCcccCcceecceEEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 234 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 234 (328)
++|+|.|+++++||++++.++++++++|+++++ |+++++||...+. .|+|+.|||+.++++++.+++||+||||++|
T Consensus 343 ~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v 421 (512)
T cd07124 343 KVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAV 421 (512)
T ss_pred CCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEE
Confidence 999999999999999999999999999999988 8899999975432 6899999999999999999999999999999
Q ss_pred EeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHh
Q 020284 235 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSN 311 (328)
Q Consensus 235 ~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~~~~~~ 311 (328)
++|+|++||++++|+++|||+++|||+|.+.++++++++++|.||||+.... .+.+||||+|.||+| +++|.+++++
T Consensus 422 ~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~ 501 (512)
T cd07124 422 IKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQ 501 (512)
T ss_pred EecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999986543 467999999999999 8889999999
Q ss_pred hhhceEEEEeC
Q 020284 312 YLQVKAVVTAL 322 (328)
Q Consensus 312 ~~~~k~i~~~~ 322 (328)
||+.|++.+++
T Consensus 502 ~t~~k~v~~~~ 512 (512)
T cd07124 502 FMQPKTVTENF 512 (512)
T ss_pred hccEEEEEEeC
Confidence 99999998763
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-74 Score=555.73 Aligned_cols=316 Identities=47% Similarity=0.762 Sum_probs=303.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+.++|+++|+|+|+++++++++.+.+..|+.||+++.|.||||+.+|+.|.
T Consensus 147 ~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 226 (466)
T cd07138 147 IVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVA 226 (466)
T ss_pred HHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 227 ~~aa~~-~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 305 (466)
T cd07138 227 EAAADT-VKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDP 305 (466)
T ss_pred HHHhcc-CCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC---CCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
.++++++||++++.+++++++++++++++|+++++||...+ ..|+|+.|||+.++++++.+++||+||||++|++|+
T Consensus 306 ~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~ 385 (466)
T cd07138 306 RDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYD 385 (466)
T ss_pred CCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccC
Confidence 99999999999999999999999999999999999986432 358999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
|++||++++|+++|||+++|||+|.+.++++++++++|.|+||+.. .++.+||||+|.||+|+++|.+++++||+.|++
T Consensus 386 ~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v 464 (466)
T cd07138 386 DEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSI 464 (466)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEE
Confidence 9999999999999999999999999999999999999999999864 567899999999999999999999999999987
Q ss_pred E
Q 020284 319 V 319 (328)
Q Consensus 319 ~ 319 (328)
+
T Consensus 465 ~ 465 (466)
T cd07138 465 Q 465 (466)
T ss_pred e
Confidence 5
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-74 Score=555.81 Aligned_cols=316 Identities=46% Similarity=0.745 Sum_probs=300.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..++++++++ +|+|++|++++++.+.+..|+.||++|.|.||||+.+|+.|+
T Consensus 153 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 231 (479)
T cd07116 153 ATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIM 231 (479)
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 4689999999999999999999999999999999998 999999999987778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCC------CCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCED------ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 155 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~d------ad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 155 (328)
+.++++ ++|+++|+|||||+||++| +|++.|++.++++. +++||.|++++++|||++++|+|+++|.+++++
T Consensus 232 ~~aa~~-~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 309 (479)
T cd07116 232 QYASEN-IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKA 309 (479)
T ss_pred HHHHcC-CCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence 999884 8999999999999999987 79999999999864 699999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecce
Q 020284 156 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPV 231 (328)
Q Consensus 156 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 231 (328)
+++|+|.++++.+||+++.++++++++++++++++|+++++||.... ..|+|+.|||+.+++ ++.+++||+||||
T Consensus 310 l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPV 388 (479)
T cd07116 310 IKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPV 388 (479)
T ss_pred cCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCce
Confidence 99999999999999999999999999999999999999999997532 358899999999864 9999999999999
Q ss_pred EEeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHh
Q 020284 232 QSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSN 311 (328)
Q Consensus 232 l~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~ 311 (328)
++|++|+|++||++++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++
T Consensus 389 l~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ 468 (479)
T cd07116 389 LAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDH 468 (479)
T ss_pred EEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877777889999999999999999999999
Q ss_pred hhhceEEEEe
Q 020284 312 YLQVKAVVTA 321 (328)
Q Consensus 312 ~~~~k~i~~~ 321 (328)
||+.|++.++
T Consensus 469 ~~~~k~~~~~ 478 (479)
T cd07116 469 YQQTKNLLVS 478 (479)
T ss_pred hhceEEEEEe
Confidence 9999999775
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-74 Score=554.78 Aligned_cols=314 Identities=47% Similarity=0.765 Sum_probs=301.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++++++|+|+|++|+|++++ +.+..|+.||++|.|.||||+.+|+.|.
T Consensus 164 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~ 242 (480)
T cd07111 164 LAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALR 242 (480)
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999854 6788999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++. ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 243 ~~aa~~-~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p 321 (480)
T cd07111 243 RATAGT-GKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDP 321 (480)
T ss_pred HHHhcc-CCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..+++++++++++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 322 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~d 401 (480)
T cd07111 322 LDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAK 401 (480)
T ss_pred CCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHH
Confidence 99999999999999999999999999999999999987544568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
||++++|+++|||+++|||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 402 eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 402 EAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999987777889999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-74 Score=553.41 Aligned_cols=317 Identities=47% Similarity=0.808 Sum_probs=305.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..|+++|+++|+|+|+|+++++++.+.+..|++|++++.|.||||+.+++.|+
T Consensus 136 ~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~ 215 (457)
T cd07114 136 LAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIA 215 (457)
T ss_pred HHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|+|++.|++.|++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 216 ~~aa~~-~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p 294 (457)
T cd07114 216 RAAAEN-LAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDP 294 (457)
T ss_pred HHHHhc-CCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.++++++||++++.+++++++++++++++|+++++||.... ..|.|++|||+.++++++.++++|+||||++|++|
T Consensus 295 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 374 (457)
T cd07114 295 LDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPF 374 (457)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEecc
Confidence 99999999999999999999999999999999999997543 35899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|.+||++++|+++|||+++|||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+++++||++|+
T Consensus 375 ~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~ 454 (457)
T cd07114 375 DDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKS 454 (457)
T ss_pred CCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeE
Confidence 99999999999999999999999999999999999999999999987777889999999999999999999999999998
Q ss_pred EE
Q 020284 318 VV 319 (328)
Q Consensus 318 i~ 319 (328)
+.
T Consensus 455 ~~ 456 (457)
T cd07114 455 VW 456 (457)
T ss_pred Ee
Confidence 85
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-74 Score=558.65 Aligned_cols=320 Identities=36% Similarity=0.558 Sum_probs=303.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.+..|+.||+++.|.||||+.+|+.|+
T Consensus 184 ~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~ 263 (511)
T TIGR01237 184 AVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIY 263 (511)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHhh-----CCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 82 QLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 82 ~~~a~-----~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
+.++. .+++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++
T Consensus 264 ~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l 343 (511)
T TIGR01237 264 EDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSL 343 (511)
T ss_pred HHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhC
Confidence 98873 2489999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
++|+|.++++++||+++..+++++++++++++++| ++++||......|+|+.|||+.++++++.+++||+||||++|++
T Consensus 344 ~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~ 422 (511)
T TIGR01237 344 NVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIR 422 (511)
T ss_pred CCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEe
Confidence 99999999999999999999999999999999988 78888865444689999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCCC-cchHHHHHhhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGR-EKGSYSLSNYL 313 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g~-~~g~~~~~~~~ 313 (328)
|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+ .+|++++++||
T Consensus 423 ~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~ 502 (511)
T TIGR01237 423 AADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFM 502 (511)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhc
Confidence 99999999999999999999999999999999999999999999987543 3568999999999995 78999999999
Q ss_pred hceEEEEeC
Q 020284 314 QVKAVVTAL 322 (328)
Q Consensus 314 ~~k~i~~~~ 322 (328)
+.|+++.++
T Consensus 503 ~~k~v~~~~ 511 (511)
T TIGR01237 503 QPKTVTENI 511 (511)
T ss_pred ceEEEEEeC
Confidence 999998763
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=558.45 Aligned_cols=318 Identities=39% Similarity=0.594 Sum_probs=302.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++++++|+|+|+++++++++.+.++.|++| +|.|.||||+++|+.|+
T Consensus 171 ~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~ 248 (524)
T PRK09407 171 AVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLA 248 (524)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999999777888889886 78999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 249 ~~aa~~-~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 327 (524)
T PRK09407 249 EQAGRR-LIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAG 327 (524)
T ss_pred HHHHhc-CCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.++++++||++++++++++++++++++++|+++++||.... ..|+|++|||+.++++++.++++|+||||++|++|+|+
T Consensus 328 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 407 (524)
T PRK09407 328 YDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADV 407 (524)
T ss_pred CCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCH
Confidence 99999999999999999999999999999999999987432 35799999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC---CCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV---FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~---~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|||+++|+++|||+++|||+|.+.++++++++++|.||||+... ..+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 408 deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~ 487 (524)
T PRK09407 408 DEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQT 487 (524)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEE
Confidence 999999999999999999999999999999999999999998653 34678999999999999999999999999999
Q ss_pred EEEeC
Q 020284 318 VVTAL 322 (328)
Q Consensus 318 i~~~~ 322 (328)
|++++
T Consensus 488 v~~~~ 492 (524)
T PRK09407 488 IATQR 492 (524)
T ss_pred EEEcc
Confidence 98764
|
|
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-74 Score=552.48 Aligned_cols=312 Identities=42% Similarity=0.689 Sum_probs=300.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+.++.|++||++|.|.||||+++|+.|+
T Consensus 140 ~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~ 219 (453)
T cd07094 140 VAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALR 219 (453)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+ +.+|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 220 ~~a---~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p 296 (453)
T cd07094 220 ANA---GGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDP 296 (453)
T ss_pred HHc---CCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 977 47899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..+++++++++++++++|+++++||.. .|.|++|||+.++++++.++++|+||||++|++|+|++
T Consensus 297 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~ 373 (453)
T cd07094 297 LDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFE 373 (453)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHH
Confidence 999999999999999999999999999999999999863 48899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
||++++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++++++|++.|+++
T Consensus 374 eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 374 EAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred HHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999999999997654 578999999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=554.71 Aligned_cols=319 Identities=41% Similarity=0.712 Sum_probs=305.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|+.||++|.|.||||+.+|+.|.
T Consensus 174 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~ 253 (494)
T PRK09847 174 TCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLL 253 (494)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCC-CHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~da-d~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++..+.+|+.+|+|||||+||.+|+ |++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 254 ~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 333 (494)
T PRK09847 254 KDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGH 333 (494)
T ss_pred HHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence 988743489999999999999999997 9999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.++++.+||+++..++++++++|++++++| ++++||... ..+.|++|||+.++++++.+++||+||||++|++|+|+
T Consensus 334 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 411 (494)
T PRK09847 334 PLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSE 411 (494)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCH
Confidence 9999999999999999999999999999999 999998753 35789999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 412 ~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 491 (494)
T PRK09847 412 EQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWI 491 (494)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999987777889999999999999999999999999999987
Q ss_pred eC
Q 020284 321 AL 322 (328)
Q Consensus 321 ~~ 322 (328)
+.
T Consensus 492 ~~ 493 (494)
T PRK09847 492 SL 493 (494)
T ss_pred ec
Confidence 64
|
|
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-74 Score=554.25 Aligned_cols=315 Identities=43% Similarity=0.704 Sum_probs=302.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+.++|.++|+|+|+++++++ +.+.+..|+.|++++.|.||||+.+|+.|+
T Consensus 154 ~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~ 232 (471)
T cd07139 154 AALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIA 232 (471)
T ss_pred HHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999998 567889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 233 ~~~~~~-~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p 311 (471)
T cd07139 233 AVCGER-LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDP 311 (471)
T ss_pred HHHHhc-CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
.++++++||++++.+++++++++++++++|+++++||.... ..|+|+.|||+.++++++.+++||+||||++|++|+|
T Consensus 312 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 391 (471)
T cd07139 312 LDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDD 391 (471)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCC
Confidence 99999999999999999999999999999999999997543 3588999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
++||++++|+++|||+++|||+|.+.++++++++++|.|+||++. ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 392 ~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 392 EDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999999999999876 5678999999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=551.38 Aligned_cols=315 Identities=43% Similarity=0.717 Sum_probs=303.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++|++ |+|+|+++++++++.+.++.|++|+++|.|.||||+.+|+.|+
T Consensus 135 ~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~ 213 (450)
T cd07092 135 AAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVA 213 (450)
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 468999999999999999999999999999999999 9999999999987666889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 214 ~~a~~~-~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 292 (450)
T cd07092 214 RAAADT-LKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDP 292 (450)
T ss_pred HHHhhc-CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++.+||+++++++++++++|+++. +|+++++||...+..|+|+.|||+.++++++.++++|+||||++|++|+|++
T Consensus 293 ~~~~~~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~d 371 (450)
T cd07092 293 DDEDTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDED 371 (450)
T ss_pred CCCCCccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHH
Confidence 999999999999999999999999998 9999999997654568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
||++++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 372 eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 372 EAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 999999999999999999999999999999999999999998777888999999999999999999999999999885
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-73 Score=551.67 Aligned_cols=314 Identities=43% Similarity=0.690 Sum_probs=302.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.+..|++|+++|+|.||||+.+|+.|+
T Consensus 136 ~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 215 (451)
T cd07150 136 ATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIA 215 (451)
T ss_pred HHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 216 ~~aa~~-~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p 294 (451)
T cd07150 216 EKAGRH-LKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDP 294 (451)
T ss_pred HHHhhc-CCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++.++++++++++++++++|+++++||.. +|+|++|||+.++++++.++++|+||||++|++|+|++
T Consensus 295 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 371 (451)
T cd07150 295 RDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAE 371 (451)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHH
Confidence 999999999999999999999999999999999999863 48899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
||++++|+++|||+++|||+|.+.++++++++++|.|+||++... .+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 372 eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 372 EALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence 999999999999999999999999999999999999999998654 368999999999999999999999999999885
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-73 Score=549.65 Aligned_cols=313 Identities=41% Similarity=0.666 Sum_probs=300.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~-~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|.++ ..+.++|.++|+|+|++|++++ +.+.+..|+.||++|.|.||||+.+|+.|
T Consensus 127 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i 205 (443)
T cd07152 127 AMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKV 205 (443)
T ss_pred HHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 578999999999999999999999996 7899999999999999999998 56788999999999999999999999999
Q ss_pred HHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 81 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 81 ~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
.+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 206 ~~~aa~~-~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~ 284 (443)
T cd07152 206 GEAAGRH-LKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGD 284 (443)
T ss_pred HHHHHhc-CCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence 9998884 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.++++.+||+++..++++++++++++.++|+++++||.. +|+|++|||+.++++++.++++|+||||++|++|+|+
T Consensus 285 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 361 (443)
T cd07152 285 PATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSD 361 (443)
T ss_pred CCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCH
Confidence 9999999999999999999999999999999999999863 4899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCC-CCCCccCCCCCCCC-CcchHHHHHhhhhceEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 318 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~~~SG~g-~~~g~~~~~~~~~~k~i 318 (328)
+||++++|+++|||+++|||+|.+.++++++++++|.||||++.... +.+||||+|.||+| +++|++++++||+.|++
T Consensus 362 ~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~ 441 (443)
T cd07152 362 EEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWV 441 (443)
T ss_pred HHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEE
Confidence 99999999999999999999999999999999999999999876544 68999999999999 88899999999999987
Q ss_pred E
Q 020284 319 V 319 (328)
Q Consensus 319 ~ 319 (328)
+
T Consensus 442 ~ 442 (443)
T cd07152 442 T 442 (443)
T ss_pred e
Confidence 5
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-73 Score=550.28 Aligned_cols=315 Identities=42% Similarity=0.637 Sum_probs=301.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..|+++|.++|+|+|+++++++++ +.+..|++| .+|.|+||||+.+|+.|+
T Consensus 136 ~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~ 213 (453)
T cd07099 136 PMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVM 213 (453)
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999955 678888887 499999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 214 ~~aa~~-~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~ 292 (453)
T cd07099 214 AAAAER-LIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGAD 292 (453)
T ss_pred HHHHhc-CCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||++++.+++++++++++++++|+++++||......|.|++|||+.++++++.++++|+||||++|++|+|++
T Consensus 293 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~ 372 (453)
T cd07099 293 DIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADED 372 (453)
T ss_pred CCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHH
Confidence 99999999999999999999999999999999999997543468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|||+++|+++|||+++|||+|.+.++++++++++|.||||+... ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 373 eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 373 EAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 99999999999999999999999999999999999999998754 3578999999999999999999999999999875
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-73 Score=551.57 Aligned_cols=320 Identities=31% Similarity=0.462 Sum_probs=299.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++++|++ +.+.+..|++||++|.|.||||+++|+.|+
T Consensus 151 ~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 229 (487)
T PRK09457 151 PNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLH 229 (487)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999998 667889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccch-HHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~-~~f~~~l~~~~~~~~~g~ 160 (328)
+.++.+..+++++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++ |+|+++|+++++++++|+
T Consensus 230 ~~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~ 309 (487)
T PRK09457 230 RQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGR 309 (487)
T ss_pred HHHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCC
Confidence 9877644678899999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred CC-CCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 161 PF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 161 ~~-~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
|. ++++++||+++.++++++++++++++++|+++++||...+..|.|+.|||+ ++++++.+++||+||||++|++|+|
T Consensus 310 p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~ 388 (487)
T PRK09457 310 WDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDD 388 (487)
T ss_pred CCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCC
Confidence 96 788999999999999999999999999999999988654456899999999 6889999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
++||++++|+++|||+++|||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+|+++|..+ .+|++.|++
T Consensus 389 ~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~ 467 (487)
T PRK09457 389 FDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMA 467 (487)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEE
Confidence 99999999999999999999999999999999999999999986543 4679999999999999999544 669999999
Q ss_pred EEeCCC
Q 020284 319 VTALKN 324 (328)
Q Consensus 319 ~~~~~~ 324 (328)
.++..+
T Consensus 468 ~~~~~~ 473 (487)
T PRK09457 468 SLESDS 473 (487)
T ss_pred EEeccc
Confidence 888533
|
|
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-73 Score=553.10 Aligned_cols=318 Identities=37% Similarity=0.615 Sum_probs=302.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+.+..|++||++|.|.||||+.+|+.|.
T Consensus 171 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~ 250 (500)
T cd07083 171 FTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIY 250 (500)
T ss_pred HHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCC------CcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh
Q 020284 82 QLAAKSNL------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 155 (328)
Q Consensus 82 ~~~a~~~~------~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 155 (328)
+.++++ . +|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|++++++
T Consensus 251 ~~aa~~-~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 329 (500)
T cd07083 251 EAAARL-APGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAER 329 (500)
T ss_pred HHHhhc-cccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHc
Confidence 998874 4 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 156 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 156 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
+++|+|.++++++||++++++++++++++++++++| ++++||......|+|+.|||+.++++++.+++||+||||++|+
T Consensus 330 ~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~ 408 (500)
T cd07083 330 LSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVI 408 (500)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEE
Confidence 999999999999999999999999999999999887 8999997655568999999999999999999999999999999
Q ss_pred eec--ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCC--CCCCccCCCCCCCC-CcchHHHHH
Q 020284 236 KYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFGGYKQSGQG-REKGSYSLS 310 (328)
Q Consensus 236 ~~~--~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~p~gG~~~SG~g-~~~g~~~~~ 310 (328)
+|+ |++||++++|+++|||+++|||+|.+.++++++++++|+|+||+.+... +.+||||+|.||+| +++|+++++
T Consensus 409 ~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~ 488 (500)
T cd07083 409 RYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLR 488 (500)
T ss_pred EeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHH
Confidence 999 9999999999999999999999999999999999999999999876543 57899999999999 688999999
Q ss_pred hhhhceEEEEe
Q 020284 311 NYLQVKAVVTA 321 (328)
Q Consensus 311 ~~~~~k~i~~~ 321 (328)
+||+.|++..+
T Consensus 489 ~~~~~k~~~~~ 499 (500)
T cd07083 489 RFLEMKAVAER 499 (500)
T ss_pred HhhheeEEEEc
Confidence 99999998764
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-73 Score=547.71 Aligned_cols=317 Identities=49% Similarity=0.750 Sum_probs=305.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|+++|+|+|+++++++++.+.++.|++|+++|.|.||||+.+|+.|.
T Consensus 134 ~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~ 213 (451)
T cd07103 134 ITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLM 213 (451)
T ss_pred HHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999997677888999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|
T Consensus 214 ~~aa~~-~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~ 292 (451)
T cd07103 214 AQAADT-VKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNG 292 (451)
T ss_pred HHHHhc-CCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..+++++++++++++++|+++++||......|+|+.|||+.++++++.++++|+||||++|++|+|++
T Consensus 293 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 372 (451)
T cd07103 293 LDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTED 372 (451)
T ss_pred CCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHH
Confidence 99999999999999999999999999999999999997654468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
||++++|++++||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|++.
T Consensus 373 eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 373 EVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999999999998877788999999999999999999999999999875
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-73 Score=546.97 Aligned_cols=312 Identities=38% Similarity=0.618 Sum_probs=298.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++.+++++|+++|+|+|+||+++++ .+.+..|+.||++|.|.||||+.+|+.|.
T Consensus 140 ~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~ 218 (452)
T cd07147 140 VAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLK 218 (452)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHH
Confidence 56889999999999999999999999999999999999999999999984 56788999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|++++.++++|+|
T Consensus 219 ~~a~---~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p 295 (452)
T cd07147 219 ARAG---KKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDP 295 (452)
T ss_pred HHhC---cCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCC
Confidence 9775 4689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++.+||+++..+++++++++++++++|+++++||.. .|+|++|||+.++++++.++++|+||||++|++|+|++
T Consensus 296 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~d 372 (452)
T cd07147 296 KDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFD 372 (452)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHH
Confidence 999999999999999999999999999999999999864 48899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
|||+++|+++|||+++|||+|.+.++++++++++|.|+||+.+.. .+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 373 eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 373 EALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 999999999999999999999999999999999999999987654 4679999999999999999999999999999864
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-73 Score=553.00 Aligned_cols=318 Identities=39% Similarity=0.594 Sum_probs=301.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.++.|++||+++.|.||||+.+|+.|+
T Consensus 188 ~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~ 267 (514)
T PRK03137 188 MAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIY 267 (514)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhC-----CCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 82 QLAAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 82 ~~~a~~-----~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
+.+++. +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++
T Consensus 268 ~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l 347 (514)
T PRK03137 268 ERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKEL 347 (514)
T ss_pred HHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhC
Confidence 988751 379999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
++|+|.++. ++||+++..+++++++++++++++ +++++||......|+|++|||+.++++++.+++||+||||++|++
T Consensus 348 ~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~ 425 (514)
T PRK03137 348 TVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIK 425 (514)
T ss_pred CCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEe
Confidence 999999998 999999999999999999999887 599999975445689999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYL 313 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~~~~~~~~ 313 (328)
|+|++||++++|+++|||+++|||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+| +++|.+++++||
T Consensus 426 ~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft 505 (514)
T PRK03137 426 AKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFL 505 (514)
T ss_pred cCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhc
Confidence 99999999999999999999999999999999999999999999986543 366899999999999 689999999999
Q ss_pred hceEEEEe
Q 020284 314 QVKAVVTA 321 (328)
Q Consensus 314 ~~k~i~~~ 321 (328)
+.|++...
T Consensus 506 ~~k~v~~~ 513 (514)
T PRK03137 506 QAKTVSEM 513 (514)
T ss_pred eEEEEEEe
Confidence 99998765
|
|
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-72 Score=546.89 Aligned_cols=317 Identities=32% Similarity=0.446 Sum_probs=301.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++|+++|+|+|++|++++ +.+.+..|+.||+++.|+||||+.+|+.|.
T Consensus 153 ~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~ 231 (477)
T TIGR01722 153 PLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIH 231 (477)
T ss_pred HHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999998 556788999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++. +.+|+++|+||+||+||++|+|++.|++.+++++|.++||.|++++++|||+++ ++|+++|+++++++++|+|
T Consensus 232 ~~a~~-~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~ 309 (477)
T TIGR01722 232 TTGSA-HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPG 309 (477)
T ss_pred HHHHh-cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCC
Confidence 98887 489999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc--C--CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~--~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.++++++||+++.++++++++++++++++|+++++||... . .+|.|+.|||+.++++++.++++|+||||++|++|
T Consensus 310 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~ 389 (477)
T TIGR01722 310 DDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEA 389 (477)
T ss_pred CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEe
Confidence 9999999999999999999999999999999999999752 1 35899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhh
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQ 314 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g--~~~g~~~~~~~~~ 314 (328)
+|++||++++|+++|||+++|||+|.+.++++++++++|.||||++... .+.+||||+|.||+| +++|.+++++||+
T Consensus 390 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~ 469 (477)
T TIGR01722 390 DTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTR 469 (477)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999985443 478999999999999 5789999999999
Q ss_pred ceEEEEe
Q 020284 315 VKAVVTA 321 (328)
Q Consensus 315 ~k~i~~~ 321 (328)
.|+++++
T Consensus 470 ~k~i~~~ 476 (477)
T TIGR01722 470 GKTVTTR 476 (477)
T ss_pred eeEEEEe
Confidence 9999876
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-73 Score=542.63 Aligned_cols=314 Identities=43% Similarity=0.704 Sum_probs=301.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHH-HHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t-~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|+++++++++.+.+..|+.|+++|.|.||||+.+++.|
T Consensus 115 ~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v 194 (431)
T cd07104 115 AMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHI 194 (431)
T ss_pred HHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 46899999999999999999999998 56899999999999999999999777788999999999999999999999999
Q ss_pred HHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 81 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 81 ~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
++.+++ +.+|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|++++.++++|+
T Consensus 195 ~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~ 273 (431)
T cd07104 195 GELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGD 273 (431)
T ss_pred HHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCC
Confidence 999988 4999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.++++.+||+++..+++++.+++++++++|+++++||.. +|+|++|||+.++++++.+++||+||||++|++|+|+
T Consensus 274 ~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 350 (431)
T cd07104 274 PRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDD 350 (431)
T ss_pred CCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCH
Confidence 9999999999999999999999999999999999999864 5899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
+||++++|++++||+++|||+|.+.++++++++++|+|+||+++.. .+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 351 ~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 351 EEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 9999999999999999999999999999999999999999998654 478999999999999999999999999999875
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-73 Score=543.73 Aligned_cols=312 Identities=41% Similarity=0.642 Sum_probs=298.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+.++|+++|+|+|+++++++++.+.+..|++||++|.|.||||+.+|+.|.
T Consensus 137 ~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~ 216 (451)
T cd07146 137 VAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIA 216 (451)
T ss_pred HHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 217 ~~a~---~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p 293 (451)
T cd07146 217 ATAG---YKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDP 293 (451)
T ss_pred HHhc---CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCC
Confidence 8764 5789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++.+||++++.+++++++++++++++|+++++||.. .|+|++|||+.++++++.++++|+||||++|++|+|++
T Consensus 294 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 370 (451)
T cd07146 294 MDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLD 370 (451)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHH
Confidence 999999999999999999999999999999999999863 48999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCC-CCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQ-GREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~-g~~~g~~~~~~~~~~k~i~ 319 (328)
||++++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+ |+++|++|+++||+.|++.
T Consensus 371 eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 371 EAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999999999986544 47899999999994 8999999999999999874
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-72 Score=548.10 Aligned_cols=316 Identities=35% Similarity=0.498 Sum_probs=300.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|..||++|.|.|||| .+|+.|+
T Consensus 175 ~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~ 253 (496)
T PLN00412 175 AVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAIS 253 (496)
T ss_pred HHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999876778899999999999999999 9999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 254 ~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 330 (496)
T PLN00412 254 KKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP 330 (496)
T ss_pred HHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCC
Confidence 8773 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.+ ++++||+++.++++++++++++++++|++++++|.. .|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 331 ~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~d 406 (496)
T PLN00412 331 ED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVE 406 (496)
T ss_pred cc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHH
Confidence 87 789999999999999999999999999999987742 58999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 407 eai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~ 486 (496)
T PLN00412 407 EGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVI 486 (496)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999998754 34679999999999999999999999999999998
Q ss_pred eCCCC
Q 020284 321 ALKNP 325 (328)
Q Consensus 321 ~~~~~ 325 (328)
++..+
T Consensus 487 ~~~~~ 491 (496)
T PLN00412 487 NLPKP 491 (496)
T ss_pred ecCCC
Confidence 86544
|
|
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-72 Score=545.44 Aligned_cols=318 Identities=36% Similarity=0.594 Sum_probs=300.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~----l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|+++..++++ |.++|+|+|++|++++++ +.++.|+.||+++.|.||||+.++
T Consensus 137 ~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g 215 (465)
T cd07098 137 LLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVG 215 (465)
T ss_pred HHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHH
Confidence 467999999999999999999999999976655 568899999999999954 788999999999999999999999
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+.|.+.++++ .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|++++++++
T Consensus 216 ~~v~~~a~~~-~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~ 294 (465)
T cd07098 216 KKVMAAAAES-LTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALR 294 (465)
T ss_pred HHHHHHHHhc-CCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcC
Confidence 9999999884 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEE
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 233 (328)
+|+|.++++++||++++.+++++++++++++.+|+++++||.... ..|+|+.|||+.++++++.++++|+||||++
T Consensus 295 ~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 374 (465)
T cd07098 295 QGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMV 374 (465)
T ss_pred CCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEE
Confidence 999999999999999999999999999999999999999986432 3589999999999999999999999999999
Q ss_pred eEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHh
Q 020284 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSN 311 (328)
Q Consensus 234 v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~ 311 (328)
|++|+|++||++++|+++|||+++|||+|.+.++++++++++|.|+||+.+. ..+.+||||+|.||+|+++|++++++
T Consensus 375 v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~ 454 (465)
T cd07098 375 VMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRG 454 (465)
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHH
Confidence 9999999999999999999999999999999999999999999999998653 34789999999999999999999999
Q ss_pred hhhceEEEEe
Q 020284 312 YLQVKAVVTA 321 (328)
Q Consensus 312 ~~~~k~i~~~ 321 (328)
|++.|++.++
T Consensus 455 ~~~~k~~~~~ 464 (465)
T cd07098 455 LCNPKSVTED 464 (465)
T ss_pred hheeEEEEEe
Confidence 9999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-74 Score=554.70 Aligned_cols=316 Identities=51% Similarity=0.820 Sum_probs=300.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++++++|+|+|+++++++++.+.+..|+.||+++.|.||||+++++.|.
T Consensus 143 ~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 222 (462)
T PF00171_consen 143 AVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIA 222 (462)
T ss_dssp HHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHH
T ss_pred cccchhhhhcccccceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhh
Confidence 46899999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 223 ~~a~~-~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~ 301 (462)
T PF00171_consen 223 KAAAK-NLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDP 301 (462)
T ss_dssp HHHHT-TTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSST
T ss_pred hhccc-ccccccccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCC
Confidence 99887 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCC---cccCCCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG---ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg---~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
.++++++||+++.++++++++++++++++|+++++|| ......|+|++|||+.++++++.++++|+||||++|++|+
T Consensus 302 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 381 (462)
T PF00171_consen 302 LDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYD 381 (462)
T ss_dssp TSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEES
T ss_pred ccccccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccc
Confidence 9999999999999999999999999999999999999 3345678999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCC-CCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~-~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
|++||++++|+++|||+++|||+|.+.++++++++++|+|+||+++...+. +||||+|.||+|+++|.+++++|++.|+
T Consensus 382 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~ 461 (462)
T PF00171_consen 382 DLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKT 461 (462)
T ss_dssp SHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEE
T ss_pred cchhhhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccC
Confidence 999999999999999999999999999999999999999999998776555 5999999999999999999999999998
Q ss_pred E
Q 020284 318 V 318 (328)
Q Consensus 318 i 318 (328)
|
T Consensus 462 V 462 (462)
T PF00171_consen 462 V 462 (462)
T ss_dssp E
T ss_pred C
Confidence 6
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-72 Score=543.86 Aligned_cols=317 Identities=49% Similarity=0.844 Sum_probs=304.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+.++|+++|+|+|+|+++++++.+.++.|+.|+++|.|.||||+.+|+.|.
T Consensus 134 ~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~ 213 (455)
T cd07093 134 LTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIM 213 (455)
T ss_pred HHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999997778889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 214 ~~aa~-~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p 292 (455)
T cd07093 214 RAAAP-NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDP 292 (455)
T ss_pred HHHhh-cccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99988 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.|+++++||+++..+++++++++++++.+|+++++||.... ..|.|+.|||+.++++++.+++||+||||++|++|
T Consensus 293 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 372 (455)
T cd07093 293 LDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPF 372 (455)
T ss_pred CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEee
Confidence 99999999999999999999999999999999999997543 35889999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|.+||++++|+.++||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++|++.|+
T Consensus 373 ~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~ 452 (455)
T cd07093 373 DDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKN 452 (455)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeE
Confidence 99999999999999999999999999999999999999999999987777889999999999999999999999999998
Q ss_pred EE
Q 020284 318 VV 319 (328)
Q Consensus 318 i~ 319 (328)
+.
T Consensus 453 ~~ 454 (455)
T cd07093 453 VC 454 (455)
T ss_pred Ee
Confidence 75
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-72 Score=539.83 Aligned_cols=314 Identities=34% Similarity=0.499 Sum_probs=295.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++ +.+.++.|++|+++|.|.||||+++|+.|+
T Consensus 114 ~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 192 (431)
T cd07095 114 PNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLH 192 (431)
T ss_pred HHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999998 567789999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEccc-chHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++.+..+++.+|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++ ++|+|+++|+++++++++|+
T Consensus 193 ~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~ 272 (431)
T cd07095 193 RQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGA 272 (431)
T ss_pred HHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCC
Confidence 98775446899999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.++++.+||+++..+++++.+++++++++|+++++||...+.+|+|++|||+ ++++++.+++||+||||++|++|+|+
T Consensus 273 p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~ 351 (431)
T cd07095 273 PDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDF 351 (431)
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCH
Confidence 99999999999999999999999999999999999999765557899999999 58889999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
+||++++|+++|||+++|||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.+++++|+. |.+
T Consensus 352 ~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~-~~~ 429 (431)
T cd07095 352 DEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSAYYAADYCAY-PVA 429 (431)
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCCCChHHHHHHHhh-hhc
Confidence 999999999999999999999999999999999999999998654 34679999999999999999999995554 443
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-72 Score=543.93 Aligned_cols=316 Identities=47% Similarity=0.749 Sum_probs=301.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|+
T Consensus 134 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~ 212 (457)
T cd07108 134 AALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIY 212 (457)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 4679999999999999999999999999999999997 999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHH-HhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~-~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++ |.|+||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 213 ~~aa~~-l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~ 291 (457)
T cd07108 213 RAAADR-LIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGD 291 (457)
T ss_pred HHHhcc-CCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCC
Confidence 999884 899999999999999999999999999999995 999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHh-CCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~-~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
|.++++++||++++.++++++++++++++ +|+++++||.... ..|.|+.|||+.++++++.+++||+||||++|+
T Consensus 292 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~ 371 (457)
T cd07108 292 PLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAI 371 (457)
T ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEee
Confidence 99999999999999999999999999998 9999999997542 358999999999999999999999999999999
Q ss_pred eecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHH-HHhhhh
Q 020284 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQ 314 (328)
Q Consensus 236 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~-~~~~~~ 314 (328)
+|+|++||++++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.++ +++||+
T Consensus 372 ~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~ 451 (457)
T cd07108 372 PWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQ 451 (457)
T ss_pred cCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhc
Confidence 9999999999999999999999999999999999999999999999987667889999999999999999977 699999
Q ss_pred ceEEE
Q 020284 315 VKAVV 319 (328)
Q Consensus 315 ~k~i~ 319 (328)
.|+++
T Consensus 452 ~k~i~ 456 (457)
T cd07108 452 KKTVN 456 (457)
T ss_pred eEEEe
Confidence 99875
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-72 Score=539.27 Aligned_cols=312 Identities=41% Similarity=0.648 Sum_probs=296.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC---chhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~---~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
+++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++++ +.+.+..|++||++|.|.||||+.+|+
T Consensus 115 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~ 194 (432)
T cd07105 115 GTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGR 194 (432)
T ss_pred HHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHH
Confidence 46789999999999999999999999999999999999999999999974 245788999999999999999999999
Q ss_pred HHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhccc
Q 020284 79 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 158 (328)
Q Consensus 79 ~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~ 158 (328)
.|++.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++
T Consensus 195 ~i~~~aa~~-~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 273 (432)
T cd07105 195 IIAETAAKH-LKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFA 273 (432)
T ss_pred HHHHHHHhc-CCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcC
Confidence 999999884 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 159 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 159 g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
| ++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.++++++.+++||+||||++|++|
T Consensus 274 g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~ 348 (432)
T cd07105 274 G-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRV 348 (432)
T ss_pred C-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEee
Confidence 8 57999999999999999999999999999999987543 46899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
+|.+||++++|+++|||+++|||+|.+.++++++++++|.|+||++... .+.+||||+|.||+|+++|.+++++||+.|
T Consensus 349 ~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k 428 (432)
T cd07105 349 KDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETK 428 (432)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccccccChHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999999997654 578999999999999999999999999999
Q ss_pred EEE
Q 020284 317 AVV 319 (328)
Q Consensus 317 ~i~ 319 (328)
+++
T Consensus 429 ~v~ 431 (432)
T cd07105 429 WIT 431 (432)
T ss_pred EEe
Confidence 886
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-72 Score=538.92 Aligned_cols=314 Identities=29% Similarity=0.431 Sum_probs=296.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++ +.+.++.|+.|+ +|.|+||||+.+|+.|+
T Consensus 125 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~ 201 (484)
T PLN02203 125 SLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIM 201 (484)
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHH
Confidence 5689999999999999999999999999999999996 99999999998 778899999995 99999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCC---CCCHHHHHHHHHHHHHh-hcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCE---DADVDKAAELAHYALFF-NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~---dad~~~aa~~iv~~~~~-~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+.++++ ++|+++|+|||||+||++ |+|++.|++.+++++|. |+||.|++++++|||++++|+|+++|.+++.+++
T Consensus 202 ~~aa~~-l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~ 280 (484)
T PLN02203 202 TAAAKH-LTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFF 280 (484)
T ss_pred HHHHhc-CCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhc
Confidence 999884 899999999999999997 69999999999999996 8999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
+|+|.++ +.+||++++++++++++++++++++ +++++||.. +..|+|++|||+.++++++.+++||+||||++|++|
T Consensus 281 ~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~gg~~-~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~ 357 (484)
T PLN02203 281 GENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSI-DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITV 357 (484)
T ss_pred CCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEeCCCc-CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEee
Confidence 9999886 6899999999999999999999887 688888864 346899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhc
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQV 315 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~ 315 (328)
+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++||+.
T Consensus 358 ~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~ 437 (484)
T PLN02203 358 KKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHE 437 (484)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcce
Confidence 999999999999999999999999999999999999999999998754 347899999999999999999999999999
Q ss_pred eEEEEeC
Q 020284 316 KAVVTAL 322 (328)
Q Consensus 316 k~i~~~~ 322 (328)
|+++.+.
T Consensus 438 k~v~~~~ 444 (484)
T PLN02203 438 KAVLRRS 444 (484)
T ss_pred eEEEEcC
Confidence 9998774
|
|
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-72 Score=541.52 Aligned_cols=312 Identities=32% Similarity=0.519 Sum_probs=294.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++++++ +|+|+++++++ +.+.+..|+.++ +|+|+||||+++|+.|+
T Consensus 126 ~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~ 202 (493)
T PTZ00381 126 TLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVM 202 (493)
T ss_pred HHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999996 99999999998 677788899887 99999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++.++++. |++
T Consensus 203 ~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~ 280 (493)
T PTZ00381 203 QAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GED 280 (493)
T ss_pred HHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCC
Confidence 99888 4999999999999999999999999999999999999999999999999999999999999999999986 666
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++.+++++++++++ ++|+++++||.. +..++|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 281 ~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~-~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 356 (493)
T PTZ00381 281 PKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEV-DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENID 356 (493)
T ss_pred CccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCc-CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHH
Confidence 688999999999999999999996 368899999875 3468899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|||+++|++++||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus 357 eAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~ 436 (493)
T PTZ00381 357 EVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVL 436 (493)
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEE
Confidence 99999999999999999999999999999999999999998643 4588999999999999999999999999999998
Q ss_pred EeC
Q 020284 320 TAL 322 (328)
Q Consensus 320 ~~~ 322 (328)
.+.
T Consensus 437 ~~~ 439 (493)
T PTZ00381 437 NKS 439 (493)
T ss_pred Ecc
Confidence 774
|
|
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-72 Score=541.61 Aligned_cols=318 Identities=31% Similarity=0.464 Sum_probs=298.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..++++++++|+|+|+||+|++ +.+.++.|++||++|.|.||||+++|+.|+
T Consensus 149 ~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~ 227 (484)
T TIGR03240 149 PNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLH 227 (484)
T ss_pred HHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999998 667889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccch-HHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~-~~f~~~l~~~~~~~~~g~ 160 (328)
+.++++..+++++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++ |+|+++|.++++++++|+
T Consensus 228 ~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~ 307 (484)
T TIGR03240 228 RQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGA 307 (484)
T ss_pred HHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCC
Confidence 9877644678999999999999999999999999999999999999999999999999985 999999999999999999
Q ss_pred C-CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 161 P-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 161 ~-~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
| .++++++||+++.++++++++++++++++|+++++||...+..+.|++|||+ ++++++.++++|+||||++|++|+|
T Consensus 308 ~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~ 386 (484)
T TIGR03240 308 WDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDD 386 (484)
T ss_pred CCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCC
Confidence 7 5788999999999999999999999999999999988754456789999999 5888999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
++||++++|+++|||+++|||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.++++ |++.|++
T Consensus 387 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~ 465 (484)
T TIGR03240 387 FDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVA 465 (484)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEE
Confidence 9999999999999999999999999999999999999999998654 3467999999999999999976655 9999999
Q ss_pred EEeC
Q 020284 319 VTAL 322 (328)
Q Consensus 319 ~~~~ 322 (328)
.++.
T Consensus 466 ~~~~ 469 (484)
T TIGR03240 466 SLEA 469 (484)
T ss_pred EEec
Confidence 9885
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-72 Score=534.76 Aligned_cols=312 Identities=33% Similarity=0.470 Sum_probs=295.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|+++ +|+|+++++++ +.+.++.|+.++ +|.|.||||+.+|+.|+
T Consensus 118 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~ 194 (434)
T cd07133 118 ALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVM 194 (434)
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHH
Confidence 5789999999999999999999999999999999997 99999999998 556788888776 99999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 195 ~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~- 272 (434)
T cd07133 195 RAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL- 272 (434)
T ss_pred HHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC-
Confidence 99888 4899999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
++++++||++++++++++++++++++++|+++++||...+ ..|+|+.|||+.++++++.+++||+||||++|++|+|
T Consensus 273 -~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 351 (434)
T cd07133 273 -ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDS 351 (434)
T ss_pred -CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCC
Confidence 4778999999999999999999999999999999987533 3689999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
++||++++|+++|||+++|||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 352 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~ 431 (434)
T cd07133 352 LDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKP 431 (434)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccce
Confidence 9999999999999999999999999999999999999999998753 45789999999999999999999999999998
Q ss_pred EE
Q 020284 318 VV 319 (328)
Q Consensus 318 i~ 319 (328)
++
T Consensus 432 v~ 433 (434)
T cd07133 432 VF 433 (434)
T ss_pred ec
Confidence 74
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-72 Score=533.98 Aligned_cols=311 Identities=33% Similarity=0.479 Sum_probs=294.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|+++ +|+|++|++++ +.+.+..|+.| .+|.|.||||+.+|+.|+
T Consensus 118 ~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~ 194 (432)
T cd07137 118 SLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIM 194 (432)
T ss_pred HHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHH
Confidence 5789999999999999999999999999999999995 99999999999 66678888887 599999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHH-hhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~-~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 195 ~~aa~~-~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 273 (432)
T cd07137 195 AAAAKH-LTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGEN 273 (432)
T ss_pred HHHHhc-CCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCC
Confidence 998884 8999999999999999999999999999999999 59999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
| +.++++||+++++++++++++++++++ |+++++||.. +.+|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 274 p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 350 (432)
T cd07137 274 P-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER-DEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKI 350 (432)
T ss_pred C-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc-CCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCH
Confidence 9 568899999999999999999999998 8999999864 346899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
+|||+++|+++|||+++|||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|++
T Consensus 351 deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v 430 (432)
T cd07137 351 EESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAV 430 (432)
T ss_pred HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCcCcCCccccHHHHHHhccCcee
Confidence 999999999999999999999999999999999999999998654 347899999999999999999999999999987
Q ss_pred E
Q 020284 319 V 319 (328)
Q Consensus 319 ~ 319 (328)
+
T Consensus 431 ~ 431 (432)
T cd07137 431 L 431 (432)
T ss_pred e
Confidence 5
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-71 Score=537.54 Aligned_cols=312 Identities=46% Similarity=0.729 Sum_probs=299.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++|+++|+|+|+++++++++.+.+..|++||++|+|.||||+.+++.|+
T Consensus 140 ~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 219 (453)
T cd07149 140 VAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIA 219 (453)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999996667789999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 220 ~~a~---~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p 296 (453)
T cd07149 220 RKAG---LKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDP 296 (453)
T ss_pred HHcC---CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCC
Confidence 8763 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++.+||+++..++++++++++++..+|+++++||.. .|+|+.|||+.++++++.++++|+||||++|++|+|++
T Consensus 297 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 373 (453)
T cd07149 297 LDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLD 373 (453)
T ss_pred CCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHH
Confidence 999999999999999999999999999999999999864 47899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
||++++|.++|||+++|||+|.+.++++++++++|.||||+++.. .+.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus 374 eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 374 EAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred HHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 999999999999999999999999999999999999999987654 477999999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-71 Score=542.21 Aligned_cols=319 Identities=32% Similarity=0.471 Sum_probs=299.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+++++.++|+|+|+++++++++.+.+..|++|+++|.|+||||++++++|+
T Consensus 184 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~ 263 (518)
T cd07125 184 FTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLIN 263 (518)
T ss_pred HHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999996666889999999999999999999999999
Q ss_pred HHHhhC--CCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccC
Q 020284 82 QLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 159 (328)
Q Consensus 82 ~~~a~~--~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g 159 (328)
+.++++ +.+|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++.++++|
T Consensus 264 ~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 343 (518)
T cd07125 264 RALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVG 343 (518)
T ss_pred HHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCcc
Confidence 987753 278999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeec-
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK- 238 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~- 238 (328)
+|.++++++||++++.+++++++++++++.. +++++||......|+|+.|||+.++ ++.+++||+||||++|++|+
T Consensus 344 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~ 420 (518)
T cd07125 344 DPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKA 420 (518)
T ss_pred CCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCC
Confidence 9999999999999999999999999999874 6888888753336899999999887 89999999999999999999
Q ss_pred -ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCCC-cchHHHHHhhhh
Q 020284 239 -DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGR-EKGSYSLSNYLQ 314 (328)
Q Consensus 239 -~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g~-~~g~~~~~~~~~ 314 (328)
|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++... .+.+||||+|.||+|+ ++|.+++++||+
T Consensus 421 ~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~ 500 (518)
T cd07125 421 EDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGN 500 (518)
T ss_pred CCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcc
Confidence 999999999999999999999999999999999999999999987653 4679999999999995 688999999999
Q ss_pred ceEEEEeCC
Q 020284 315 VKAVVTALK 323 (328)
Q Consensus 315 ~k~i~~~~~ 323 (328)
.|++++++.
T Consensus 501 ~k~i~~~~~ 509 (518)
T cd07125 501 EKTVSLNTT 509 (518)
T ss_pred eEEEEEEcc
Confidence 999998863
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-72 Score=533.42 Aligned_cols=309 Identities=34% Similarity=0.505 Sum_probs=292.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.+++++ |+|+|+++++++.+.+. ..|+.|| +|.|.||||+.+|+.|+
T Consensus 125 ~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~-~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~~g~~i~ 201 (436)
T cd07135 125 ALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK-YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGRVGRIIA 201 (436)
T ss_pred HHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcHHHHHHH
Confidence 578999999999999999999999999999999999 69999999999855554 5689999 99999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 202 ~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 280 (436)
T cd07135 202 EAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA 280 (436)
T ss_pred HHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC
Confidence 98887 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
++++.+||+++.++++++.++++++ |+++++||... ..|+|+.|||+.++++++.++++|+||||++|++|+|++
T Consensus 281 -~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~d 355 (436)
T cd07135 281 -NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGEMD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLD 355 (436)
T ss_pred -CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCCcC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHH
Confidence 9999999999999999999999886 78999998754 368999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|||+++|+++|||++||||+|.+.++++++++++|.|+||+.+. ..+.+||||+|.||+|+++|.+++++||+.|++.
T Consensus 356 eai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 356 EAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 99999999999999999999999999999999999999998654 3578999999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-71 Score=532.22 Aligned_cols=309 Identities=34% Similarity=0.535 Sum_probs=292.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++++++ +|+|++|++++ +.+.+..|+.|+ +|.|.||||+++|+.|+
T Consensus 117 ~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~ 193 (449)
T cd07136 117 ALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVM 193 (449)
T ss_pred HHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999998 99999999998 556678888776 99999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++. .+|+++|+|||||+||++|+|+|.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 194 ~~aa~~-~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p 272 (449)
T cd07136 194 EAAAKH-LTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDP 272 (449)
T ss_pred HHHHhc-CCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 998874 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.+ ++++||++++.++++++++++++ ++++||... .+|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 273 ~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~-~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~ 345 (449)
T cd07136 273 LE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTD-RETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLD 345 (449)
T ss_pred CC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcC-CCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHH
Confidence 87 88999999999999999999763 799998753 368999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|||+++|+++|||+++|||+|.+.++++++++++|.||||+... ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 346 eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 425 (449)
T cd07136 346 EAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSIL 425 (449)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCccCcCcccCCcccCHHHHHHhccceEEE
Confidence 99999999999999999999999999999999999999998654 3478999999999999999999999999999998
Q ss_pred Ee
Q 020284 320 TA 321 (328)
Q Consensus 320 ~~ 321 (328)
++
T Consensus 426 ~~ 427 (449)
T cd07136 426 KK 427 (449)
T ss_pred Ec
Confidence 76
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-71 Score=531.08 Aligned_cols=313 Identities=39% Similarity=0.560 Sum_probs=298.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++++++ +|+|+++++++ +.+.+..|++|+ ++.|.||||+.+|+.|+
T Consensus 117 ~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~ 193 (433)
T cd07134 117 AFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVM 193 (433)
T ss_pred HHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHH
Confidence 4689999999999999999999999999999999999 99999999999 567888999998 99999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++. .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|++++++++.|+|
T Consensus 194 ~~aa~~-~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~ 272 (433)
T cd07134 194 AAAAKH-LASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDA 272 (433)
T ss_pred HHHHhc-CCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCC
Confidence 998874 8999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred -CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 -FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 -~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.+.++++||++++.+++++++++++++++|+++++||.. +..|+|++|||+.++++++.+++||+||||++|++|+|+
T Consensus 273 ~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 351 (433)
T cd07134 273 ARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF-DAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDL 351 (433)
T ss_pred CcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc-CCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCH
Confidence 889999999999999999999999999999999999975 345899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
+|+++++|+++|||+++|||+|.+.++++++++++|.||||+++. ..+.+||||+|.||+|+++|++++++||+.|++
T Consensus 352 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i 431 (433)
T cd07134 352 DEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAV 431 (433)
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCCcCcHHHHHHhccccee
Confidence 999999999999999999999999999999999999999998764 347899999999999999999999999999987
Q ss_pred E
Q 020284 319 V 319 (328)
Q Consensus 319 ~ 319 (328)
.
T Consensus 432 ~ 432 (433)
T cd07134 432 L 432 (433)
T ss_pred e
Confidence 4
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-71 Score=539.11 Aligned_cols=316 Identities=28% Similarity=0.351 Sum_probs=290.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~ag-lp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|++++.+.+..| +++|+|.||||+++|++|
T Consensus 161 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~~G~~i 237 (513)
T cd07128 161 MLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAATAAKL 237 (513)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHHHHHHH
Confidence 57899999999999999999999999999999999999 99999999998543333332 578999999999999999
Q ss_pred HHHH--hhCCCCcceeccCCCCceecCCCCC-----HHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHH
Q 020284 81 LQLA--AKSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 153 (328)
Q Consensus 81 ~~~~--a~~~~~~~~~e~gG~~~~iV~~dad-----~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 153 (328)
++.+ ++ +++|+++|+|||||+||++||| +|.+++.+++++|.|+||.|++++|+|||++++|+|+++|++++
T Consensus 238 ~~~a~~a~-~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 316 (513)
T cd07128 238 RAHPNIVA-RSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARL 316 (513)
T ss_pred HHHhhhhc-cCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHHHH
Confidence 9975 35 4899999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc-------CCCCceecceeeecCCCC--CcccC
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKDD--MLIAK 224 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~-------~~~g~~~~Ptvl~~~~~~--~~~~~ 224 (328)
+++++|+|.++++++||++++.++++++++|+++++. +++++||... ...|+|+.|||+.+++++ +.+++
T Consensus 317 ~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~ 395 (513)
T cd07128 317 AKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHD 395 (513)
T ss_pred HhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHh
Confidence 9999999999999999999999999999999999988 9999999652 135899999999988874 88999
Q ss_pred cceecceEEeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCCCC---------CCCCCCcc
Q 020284 225 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV---------FDAAIPFG 293 (328)
Q Consensus 225 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~---------~~~~~p~g 293 (328)
||+||||++|++|+|++||++++|+++|||++||||+|.+.+++++++++ +|+||||+.+. ..+.+|||
T Consensus 396 eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfG 475 (513)
T cd07128 396 VEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHG 475 (513)
T ss_pred CCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999997 99999998642 24678999
Q ss_pred CCCCCCCCCcc-hHHHHHhhhhceEEEEeCC
Q 020284 294 GYKQSGQGREK-GSYSLSNYLQVKAVVTALK 323 (328)
Q Consensus 294 G~~~SG~g~~~-g~~~~~~~~~~k~i~~~~~ 323 (328)
|+|.||+|++. |.+++++|++.|+|. +++
T Consensus 476 G~k~SG~G~~~gg~~~l~~~~~~k~v~-~~~ 505 (513)
T cd07128 476 GPGRAGGGEELGGLRGVKHYMQRTAVQ-GSP 505 (513)
T ss_pred CcccCCCCcccccHHHHHHhheeeeee-CCH
Confidence 99999999995 799999999999874 443
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-70 Score=531.90 Aligned_cols=315 Identities=38% Similarity=0.547 Sum_probs=301.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++|+++|+|+|+++++++++.+.++.|.+|+++|.|.||||+.+++.|.
T Consensus 158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ .+|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|
T Consensus 238 ~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~ 314 (473)
T cd07082 238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP 314 (473)
T ss_pred HHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 8764 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++.+++++++++++++.++|+++++||... .|+|+.|||+.++++++.++++|+||||++|++|+|++
T Consensus 315 ~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 392 (473)
T cd07082 315 WDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIE 392 (473)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHH
Confidence 9999999999999999999999999999999999999753 38999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCC-CCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
||++++|+++|||+++|||+|.+.++++++++++|.||||++.... +.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 393 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 393 EAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred HHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence 9999999999999999999999999999999999999999976543 568999999999999999999999999999876
Q ss_pred e
Q 020284 321 A 321 (328)
Q Consensus 321 ~ 321 (328)
+
T Consensus 473 ~ 473 (473)
T cd07082 473 N 473 (473)
T ss_pred C
Confidence 4
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-70 Score=546.50 Aligned_cols=315 Identities=26% Similarity=0.345 Sum_probs=290.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~ag-lp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
++++++|||++||+||+|||+.+|+++..+++++.++| +|+|++|+++++. +..+..++++|.|.||||+++|+.|
T Consensus 161 ~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~~G~~i 237 (663)
T TIGR02278 161 LLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAATADRL 237 (663)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHHHHHHH
Confidence 57899999999999999999999999999999999999 9999999999842 2233334778999999999999999
Q ss_pred HHHH--hhCCCCcceeccCCCCceecCCCCC-----HHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHH
Q 020284 81 LQLA--AKSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 153 (328)
Q Consensus 81 ~~~~--a~~~~~~~~~e~gG~~~~iV~~dad-----~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 153 (328)
++.+ ++ +++|+++|+|||||+||++||| ++.|++.+++++|.|+||.|+++++||||++++|+|+++|.+++
T Consensus 238 ~~~aaaa~-~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 316 (663)
T TIGR02278 238 RAHPNVLE-RGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARL 316 (663)
T ss_pred HHhHhHHh-cCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHHH
Confidence 9874 35 4899999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCC-cccCcceecceE
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM-LIAKDEIFGPVQ 232 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~-~~~~~E~fgPvl 232 (328)
+++++|+|.++++++||++++.++++++++|++++++|+++++||... ..|+|++|||+.++++++ .+++||+||||+
T Consensus 317 ~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl 395 (663)
T TIGR02278 317 AKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEAFGPVA 395 (663)
T ss_pred HhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhccccCCeE
Confidence 999999999999999999999999999999999999999999999753 358999999999888876 789999999999
Q ss_pred EeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc--ceeEEEE-cCCC--------CCCCCCCccCCCCCCCC
Q 020284 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWI-NCFD--------VFDAAIPFGGYKQSGQG 301 (328)
Q Consensus 233 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~i-N~~~--------~~~~~~p~gG~~~SG~g 301 (328)
+|++|+|.+||++++|+++|||++||||+|.+.++++++++ ++|.||| |... ...+.+||||+|.||+|
T Consensus 396 ~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G 475 (663)
T TIGR02278 396 TFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGG 475 (663)
T ss_pred EEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCC
Confidence 99999999999999999999999999999999999999999 7999999 7521 12367899999999999
Q ss_pred Cc-chHHHHHhhhhceEEEEe
Q 020284 302 RE-KGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 302 ~~-~g~~~~~~~~~~k~i~~~ 321 (328)
++ +|.+++++|++.|++...
T Consensus 476 ~~~g~~~~l~~f~~~k~v~~~ 496 (663)
T TIGR02278 476 EELGGLRSVKHYMQRTAIQGS 496 (663)
T ss_pred CccchHHHHHHhceeEEEEcC
Confidence 99 468999999999998644
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-70 Score=530.66 Aligned_cols=313 Identities=32% Similarity=0.472 Sum_probs=292.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.||++|.|.||||+.+|+.|+
T Consensus 177 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~ 256 (500)
T TIGR01238 177 FTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLIN 256 (500)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999986667889999999999999999999999999
Q ss_pred HHHhhCCC---CcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhccc
Q 020284 82 QLAAKSNL---KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 158 (328)
Q Consensus 82 ~~~a~~~~---~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~ 158 (328)
+.++++ . +|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++
T Consensus 257 ~~aa~~-~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~v 335 (500)
T TIGR01238 257 QTLAQR-EDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKV 335 (500)
T ss_pred HHHhhc-ccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCC
Confidence 998874 4 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCc---ccCCCCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 159 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE---RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 159 g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~---~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
|+|.++++++||++++.++++++++++++.+.|++++.++. .....|+|++|||+.+ +++.++++|+||||++|+
T Consensus 336 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~ 413 (500)
T TIGR01238 336 GVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVV 413 (500)
T ss_pred CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEE
Confidence 99999999999999999999999999999999998874332 1223689999999974 678899999999999999
Q ss_pred eec--ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHH
Q 020284 236 KYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLS 310 (328)
Q Consensus 236 ~~~--~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~~~~~ 310 (328)
+|+ +++|||+++|+++|||+++|||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+| +++|.++++
T Consensus 414 ~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~ 493 (500)
T TIGR01238 414 RYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLY 493 (500)
T ss_pred EeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHH
Confidence 998 799999999999999999999999999999999999999999986543 356899999999999 899999999
Q ss_pred hhhhceE
Q 020284 311 NYLQVKA 317 (328)
Q Consensus 311 ~~~~~k~ 317 (328)
+|++.|+
T Consensus 494 ~~~~~k~ 500 (500)
T TIGR01238 494 RLTQVQY 500 (500)
T ss_pred HHHhhcC
Confidence 9999874
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-70 Score=546.14 Aligned_cols=315 Identities=27% Similarity=0.359 Sum_probs=289.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~ag-lp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
++++++|||++||+||+|||+.+|+++..|++++.++| +|+|++|+++++.. ..+..++++++|.||||+++|+.|
T Consensus 165 ~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~FTGS~~~G~~i 241 (675)
T PRK11563 165 MLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTFTGSAATAQKL 241 (675)
T ss_pred HHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEEECcHHHHHHH
Confidence 57899999999999999999999999999999999999 99999999998422 234444679999999999999999
Q ss_pred HHH--HhhCCCCcceeccCCCCceecCCCCC-----HHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHH
Q 020284 81 LQL--AAKSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 153 (328)
Q Consensus 81 ~~~--~a~~~~~~~~~e~gG~~~~iV~~dad-----~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 153 (328)
++. +++ +++|+++|+|||||+||++||| +|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++
T Consensus 242 ~~~~~a~~-~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 320 (675)
T PRK11563 242 RAHPNVVA-NSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARL 320 (675)
T ss_pred Hhhhhhhh-CCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHHHHHH
Confidence 985 335 5899999999999999999995 99999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc-------CCCCceecceeeecCCC--CCcccC
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKD--DMLIAK 224 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~-------~~~g~~~~Ptvl~~~~~--~~~~~~ 224 (328)
+++++|+|.++++++||+++..++++++++|++++++ +++++||... ...|+|++|||+.++++ ++.+++
T Consensus 321 ~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~ 399 (675)
T PRK11563 321 AKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHD 399 (675)
T ss_pred hcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhh
Confidence 9999999999999999999999999999999999998 9999999531 13589999999999988 578999
Q ss_pred cceecceEEeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCCCC-------C--CCCCCcc
Q 020284 225 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV-------F--DAAIPFG 293 (328)
Q Consensus 225 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~-------~--~~~~p~g 293 (328)
+|+||||++|++|+|++||++++|+++|||++||||+|.+.+++++++++ +|.||||+.+. . .+.+|||
T Consensus 400 eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfG 479 (675)
T PRK11563 400 VEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHG 479 (675)
T ss_pred ccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcC
Confidence 99999999999999999999999999999999999999999999999997 99999997531 1 3678999
Q ss_pred CCCCCCCCCcc-hHHHHHhhhhceEEEEe
Q 020284 294 GYKQSGQGREK-GSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 294 G~~~SG~g~~~-g~~~~~~~~~~k~i~~~ 321 (328)
|+|.||+|++. |.+++++|++.|++...
T Consensus 480 G~k~SG~G~~~~g~~~~~~f~~~k~~~~~ 508 (675)
T PRK11563 480 GPGRAGGGEELGGLRGVKHYMQRTAVQGS 508 (675)
T ss_pred CCCCCCCCccccchhHHHHhheeeeeecC
Confidence 99999999994 69999999999988643
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-70 Score=521.54 Aligned_cols=311 Identities=33% Similarity=0.492 Sum_probs=289.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++++++ +|+|+++++++++. .+..|+. +++|.|.||||+.+|+.|.
T Consensus 117 ~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~~g~~i~ 193 (443)
T cd07132 117 TLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYPVVLGGVE-ETTELLK-QRFDYIFYTGSTSVGKIVM 193 (443)
T ss_pred HHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEEEEeCCHH-HHHHHHh-CCCCEEEEECChHHHHHHH
Confidence 5789999999999999999999999999999999996 99999999999444 4556765 5899999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|.+++++++.|+|
T Consensus 194 ~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~ 272 (443)
T cd07132 194 QAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP 272 (443)
T ss_pred HHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 98887 48999999999999999999999999999999999999999999999999999999999999999999998988
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
++++++||++++++++++++++++ +++++||.. +.++.|+.|||+.++++++.++++|+||||++|++|+|++
T Consensus 273 -~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~-~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 345 (443)
T cd07132 273 -KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQT-DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLD 345 (443)
T ss_pred -CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCcc-CCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHH
Confidence 788999999999999999999974 488898874 3468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|||+++|+++|||+++|||+|.+.++++++++++|.||||++... .+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 346 eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~ 425 (443)
T cd07132 346 EAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCL 425 (443)
T ss_pred HHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEE
Confidence 999999999999999999999999999999999999999987543 477999999999999999999999999999998
Q ss_pred EeCC
Q 020284 320 TALK 323 (328)
Q Consensus 320 ~~~~ 323 (328)
++++
T Consensus 426 ~~~~ 429 (443)
T cd07132 426 VKSL 429 (443)
T ss_pred Eccc
Confidence 7754
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-69 Score=527.65 Aligned_cols=313 Identities=26% Similarity=0.348 Sum_probs=285.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~ag-lp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|.++..+.+++.++| +|+|+++++++++.++...| +++|.|.||||+.+|+.|
T Consensus 165 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G~~v 241 (521)
T PRK11903 165 LWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETAAVL 241 (521)
T ss_pred HHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHHHHH
Confidence 46899999999999999999999999999999999999 99999999998655554443 789999999999999999
Q ss_pred HHHH--hhCCCCcceeccCCCCceecCCCCC-----HHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHH
Q 020284 81 LQLA--AKSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 153 (328)
Q Consensus 81 ~~~~--a~~~~~~~~~e~gG~~~~iV~~dad-----~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 153 (328)
++.+ ++ +++|+++|+|||||+||++|+| ++.+++.+++++|.|+||.|++++++|||++++|+|+++|++++
T Consensus 242 ~~~aa~~~-~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~ 320 (521)
T PRK11903 242 RSHPAVVQ-RSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARL 320 (521)
T ss_pred Hhhhhhhc-cCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHHHH
Confidence 9964 35 4899999999999999999999 59999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc------CCCCceecceeeecCCC--CCcccCc
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKD--DMLIAKD 225 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~------~~~g~~~~Ptvl~~~~~--~~~~~~~ 225 (328)
+++++|+|.++++++||+++..++++++++|+.. .+|+++++||... ...|+|++|||+.++++ ++.+++|
T Consensus 321 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~e 399 (521)
T PRK11903 321 AKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDV 399 (521)
T ss_pred HhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhC
Confidence 9999999999999999999999999999999964 5799999999642 13588999999986654 4688899
Q ss_pred ceecceEEeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc--ceeEEEEcCCCC---------CCCCCCccC
Q 020284 226 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV---------FDAAIPFGG 294 (328)
Q Consensus 226 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~---------~~~~~p~gG 294 (328)
|+||||++|++|+|++||++++|+++|||++||||+|.+.++++++++ ++|+|+||+... ..+.+||||
T Consensus 400 E~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG 479 (521)
T PRK11903 400 EVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGG 479 (521)
T ss_pred cccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999 899999997532 346789999
Q ss_pred CCCCCCCCcc-hHHHHHhhhhceEEE
Q 020284 295 YKQSGQGREK-GSYSLSNYLQVKAVV 319 (328)
Q Consensus 295 ~~~SG~g~~~-g~~~~~~~~~~k~i~ 319 (328)
+|.||+|+++ |.+++++||+.|++.
T Consensus 480 ~k~SG~Gr~~g~~~~l~~~t~~~~~~ 505 (521)
T PRK11903 480 PGRAGGGEELGGLRALAFYHRRSAVQ 505 (521)
T ss_pred CCcCcCCcccccHHHHHHHhccceee
Confidence 9999999995 589999999977764
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-68 Score=512.12 Aligned_cols=307 Identities=35% Similarity=0.550 Sum_probs=288.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|.+ |+|+|+++++++ +.+.+..|+.|| +|.|.||||+.+++.|+
T Consensus 117 ~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~vv~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~ 193 (426)
T cd07087 117 ALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVAVVEG-GVEVATALLAEP-FDHIFFTGSPAVGKIVM 193 (426)
T ss_pred HHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEEEEeC-CchHHHHHHhCC-CCEEEEeCChHHHHHHH
Confidence 468999999999999999999999999999999999 699999999998 456688999999 99999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|.+++++++.|+|
T Consensus 194 ~~a~~~-~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~ 272 (426)
T cd07087 194 EAAAKH-LTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP 272 (426)
T ss_pred HHHHhh-CCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC
Confidence 998884 8999999999999999999999999999999999999999999999999999999999999999999986666
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
++.+++||++++.+.++++++++++ ++++||.. +..|+|+.|||+.++++++.++++|+||||++|++|+|++
T Consensus 273 -~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 345 (426)
T cd07087 273 -KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQV-DKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLD 345 (426)
T ss_pred -ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCcc-CCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHH
Confidence 5788999999999999999999764 78888865 3368999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
||++++|+++|||+++|||+|.+.++++++++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 346 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 346 EAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 99999999999999999999999999999999999999998754 3478999999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-68 Score=548.77 Aligned_cols=318 Identities=35% Similarity=0.508 Sum_probs=298.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|++++++.+.+..|+.||+++.|.||||+.+++.|.
T Consensus 701 ~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~ 780 (1038)
T PRK11904 701 FLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIIN 780 (1038)
T ss_pred HHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998778899999999999999999999999999
Q ss_pred HHHhhC--CCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccC
Q 020284 82 QLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 159 (328)
Q Consensus 82 ~~~a~~--~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g 159 (328)
+.++++ ..+|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++++|||++++|+|+++|+++++++++|
T Consensus 781 ~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vG 860 (1038)
T PRK11904 781 RTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVG 860 (1038)
T ss_pred HHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 988763 267999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
+|.++++++||++++.++++++++|+++.+ |+++++||..++ ..|+|+.|||+.. +++.++++|+||||++|++|
T Consensus 861 dp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~ 937 (1038)
T PRK11904 861 DPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRY 937 (1038)
T ss_pred CcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEe
Confidence 999999999999999999999999999876 889999987543 2589999999963 56778999999999999999
Q ss_pred c--ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhh
Q 020284 238 K--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNY 312 (328)
Q Consensus 238 ~--~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~~~~~~~ 312 (328)
+ +++|+|+++|.++|||+++|||+|.+.++++++++++|+||||+..+. ...+||||+|.||+| +.+|++++++|
T Consensus 938 ~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f 1017 (1038)
T PRK11904 938 KASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRF 1017 (1038)
T ss_pred CCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHH
Confidence 8 689999999999999999999999999999999999999999987654 356899999999999 68899999999
Q ss_pred hhceEEEEeC
Q 020284 313 LQVKAVVTAL 322 (328)
Q Consensus 313 ~~~k~i~~~~ 322 (328)
++.|+|.++.
T Consensus 1018 ~~~ktv~~~~ 1027 (1038)
T PRK11904 1018 ATEKTVTVNT 1027 (1038)
T ss_pred hceEEEEEcc
Confidence 9999998764
|
|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-67 Score=501.13 Aligned_cols=317 Identities=52% Similarity=0.859 Sum_probs=304.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..++++|+++|+|+++++++++++.+.+..|..|+++|.|.||||..+++.|.
T Consensus 113 ~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~ 192 (432)
T cd07078 113 AAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIM 192 (432)
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999996666888999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+||++++||++|+|++.+++.+++++|.++||.|++++++|||++++++|+++|+++++++++|+|
T Consensus 193 ~~a~~~-~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p 271 (432)
T cd07078 193 RAAAEN-LKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNP 271 (432)
T ss_pred HHHhhc-cCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCC-CCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.|+++++||++++.++++++++++++.++|+++++||..... .|.|++|||+.++++++.++++|+||||++|++|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~ 351 (432)
T cd07078 272 LDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDE 351 (432)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCH
Confidence 999999999999999999999999999999999999875432 5899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
+||++++|+.++||+++|||+|.+.++++++++++|+|+||+++.. .+.+||||+|.||+|+++|++++++|++.|++.
T Consensus 352 ~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 352 EEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred HHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999999998776 789999999999999999999999999999875
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-67 Score=542.68 Aligned_cols=318 Identities=30% Similarity=0.456 Sum_probs=297.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.+..|+.||+++.|.||||+.+++.|.
T Consensus 693 ~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~ 772 (1208)
T PRK11905 693 FTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQ 772 (1208)
T ss_pred HHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred HHHhhC--CCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccC
Q 020284 82 QLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 159 (328)
Q Consensus 82 ~~~a~~--~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g 159 (328)
+.++++ +.+|+++|+|||||+||++|||+|.|++.+++|+|.++||.|++++++|||++++|+|+++|+++++++++|
T Consensus 773 ~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vG 852 (1208)
T PRK11905 773 RTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIG 852 (1208)
T ss_pred HHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCC
Confidence 988863 248999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
+|.+.++++||++++.++++++++|+++.+.|+.++.++.... ..|+|+.|||+.. +++.++++|+||||++|++|+
T Consensus 853 dP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~ 930 (1208)
T PRK11905 853 DPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFK 930 (1208)
T ss_pred CchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeC
Confidence 9999999999999999999999999999999998887664222 4699999999973 567889999999999999997
Q ss_pred --ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCC--CCCCccCCCCCCCC-CcchHHHHHhhh
Q 020284 239 --DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFGGYKQSGQG-REKGSYSLSNYL 313 (328)
Q Consensus 239 --~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~p~gG~~~SG~g-~~~g~~~~~~~~ 313 (328)
+++|+|+++|.++|||+++|||+|.+.++++++++++|+||||+..+.. ..+||||+|.||+| +.+|++++++|+
T Consensus 931 ~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~ 1010 (1208)
T PRK11905 931 ADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLV 1010 (1208)
T ss_pred CCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHh
Confidence 6999999999999999999999999999999999999999999876543 56899999999999 589999999999
Q ss_pred hceEEEEe
Q 020284 314 QVKAVVTA 321 (328)
Q Consensus 314 ~~k~i~~~ 321 (328)
+.|++.++
T Consensus 1011 ~~k~v~~~ 1018 (1208)
T PRK11905 1011 REAPTPIP 1018 (1208)
T ss_pred hcceeecc
Confidence 99998765
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-67 Score=542.04 Aligned_cols=315 Identities=31% Similarity=0.463 Sum_probs=294.4
Q ss_pred CchhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 1 ~~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
++++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|
T Consensus 784 i~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I 863 (1318)
T PRK11809 784 IFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLL 863 (1318)
T ss_pred HHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred HHHHhhC-----CCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh
Q 020284 81 LQLAAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 155 (328)
Q Consensus 81 ~~~~a~~-----~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 155 (328)
.+.++++ ..+|+++|+||+|++||++|||++.|++.+++|+|.++||.|++.+++|||++++|+|+++|++++++
T Consensus 864 ~~~aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~ 943 (1318)
T PRK11809 864 QRNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAE 943 (1318)
T ss_pred HHHHhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHh
Confidence 9988764 12799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC---CCCceecceeeecCCCCCcccCcceecceE
Q 020284 156 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 232 (328)
Q Consensus 156 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 232 (328)
+++|+|.+.++++||+++..+.++++++|++++++|++++.++.... ..|+|+.|||+.. +++.++++|+||||+
T Consensus 944 l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL 1021 (1318)
T PRK11809 944 CRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVL 1021 (1318)
T ss_pred cCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceE
Confidence 99999999999999999999999999999999999999988775322 4599999999974 567789999999999
Q ss_pred EeEeec--ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHH
Q 020284 233 SILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSY 307 (328)
Q Consensus 233 ~v~~~~--~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~~ 307 (328)
+|++|+ +++|+|+++|.++|||+++|||+|.+.++++++++++|+||||+.... ...+||||+|.||+| +.+|++
T Consensus 1022 ~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~ 1101 (1318)
T PRK11809 1022 HVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPL 1101 (1318)
T ss_pred EEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHH
Confidence 999997 799999999999999999999999999999999999999999986553 356899999999999 579999
Q ss_pred HHHhhhhceE
Q 020284 308 SLSNYLQVKA 317 (328)
Q Consensus 308 ~~~~~~~~k~ 317 (328)
++.+|++.+.
T Consensus 1102 yL~~f~~~~~ 1111 (1318)
T PRK11809 1102 YLYRLLATRP 1111 (1318)
T ss_pred HHHHHhccCC
Confidence 9999999874
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-67 Score=470.71 Aligned_cols=310 Identities=30% Similarity=0.492 Sum_probs=288.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.+-.+++||||||+||+|||+.+|.++..+++++.++ ++.+.+.+|.|.-++. ..|..+ ++|.|+||||+.+|+.|+
T Consensus 121 ~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~~~VV~Ggv~ET-t~LL~~-rfD~IfyTGsp~VgkIim 197 (477)
T KOG2456|consen 121 TLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDLIRVVNGGVPET-TELLKQ-RFDHIFYTGSPRVGKIIM 197 (477)
T ss_pred ehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcceEEEecCCCchH-HHHHHh-hccEEEecCCchHHHHHH
Confidence 4567899999999999999999999999999999999 9999999999954554 556665 799999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
.+++++ ++|+++|+|||+|++|++++|++-++++|+++++.|+||.|.+++.++++.+++.+++++++..+++.. |+.
T Consensus 198 ~aAaKh-LTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n 275 (477)
T KOG2456|consen 198 AAAAKH-LTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GEN 275 (477)
T ss_pred HHHHhc-CCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCC
Confidence 999995 999999999999999999999999999999999999999999999999999999999999999998864 777
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.+.+.+++.+++..|++|+..++++. .++..||+. +....++.|||+.+++.++++++||+||||++++.+++++
T Consensus 276 ~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~-d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~ 350 (477)
T KOG2456|consen 276 PKESKDLSRIINQRHFQRLSALLDET----GKVAIGGES-DESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLD 350 (477)
T ss_pred ccccccHHHHhhHHHHHHHHHHhcCC----CceecCCcc-chhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHH
Confidence 78899999999999999999998643 578889985 4566799999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCC--CCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF--DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~--~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|+++.+|+.+-.|++|+||+|...++|+..++.+|.|.+|+. +.....+||||+|.||+|++||+++++.|++.|++.
T Consensus 351 Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l 430 (477)
T KOG2456|consen 351 EAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCL 430 (477)
T ss_pred HHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEeeccCcCCcCccccccccccccccccccchhhh
Confidence 999999999999999999999999999999999999999995 335688999999999999999999999999999987
Q ss_pred Ee
Q 020284 320 TA 321 (328)
Q Consensus 320 ~~ 321 (328)
.+
T Consensus 431 ~r 432 (477)
T KOG2456|consen 431 LR 432 (477)
T ss_pred hc
Confidence 66
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-65 Score=493.26 Aligned_cols=302 Identities=24% Similarity=0.360 Sum_probs=278.1
Q ss_pred hhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 3 ~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
++++++||++||+||+|||+.+|.++.++++++. ++|+|+|++|+|++++.+.+..|++||++|.|.||||+.+|+
T Consensus 125 ~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~ 204 (454)
T cd07129 125 GGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGR 204 (454)
T ss_pred hhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHH
Confidence 4799999999999999999999999999988764 889999999999997667889999999999999999999999
Q ss_pred HHHHHHhhC-CCCcceeccCCCCceecCCCC---CHHHHHHHHHHHHHhhcCCCccCCCeeEEccc-chHHHHHHHHHHH
Q 020284 79 IVLQLAAKS-NLKPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALA 153 (328)
Q Consensus 79 ~v~~~~a~~-~~~~~~~e~gG~~~~iV~~da---d~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~ 153 (328)
.|++.++++ +++|+++|+|||||+||++|+ |++.|++.+++++|.|+||.|++++++|||++ ++|+|+++|.+++
T Consensus 205 ~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~ 284 (454)
T cd07129 205 ALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEAL 284 (454)
T ss_pred HHHHHhhccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHH
Confidence 999988872 489999999999999999999 89999999999999999999999999999999 9999999999999
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhC-CCeEeeCCcccCCCCceecceeeecCC---CCCcccCcceec
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVK---DDMLIAKDEIFG 229 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~~~---~~~~~~~~E~fg 229 (328)
+++++| |++++...++..+.+++++++ |+++++||... .+|+|++|||+.... +++.++++|+||
T Consensus 285 ~~~~~g----------~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FG 353 (454)
T cd07129 285 AAAPAQ----------TMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFG 353 (454)
T ss_pred hccCCC----------CCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCC
Confidence 988754 667777778888899999998 99999999743 468999999998555 689999999999
Q ss_pred ceEEeEeecChhHHHHHhhcCCCCceEEEecCC--HHHHHHHHHhc--ceeEEEEcCCCCCC---CCCCccC-CCCCCCC
Q 020284 230 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN--LDTANTLMRAL--RVGSVWINCFDVFD---AAIPFGG-YKQSGQG 301 (328)
Q Consensus 230 Pvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d--~~~~~~~~~~l--~~g~v~iN~~~~~~---~~~p~gG-~~~SG~g 301 (328)
||++|++|+|.+|+++++|.++|||+++|||+| .+.++++++++ ++|+|+||+++... +.+|||| +|.||+|
T Consensus 354 Pv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g 433 (454)
T cd07129 354 PASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDP 433 (454)
T ss_pred CeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCC
Confidence 999999999999999999999999999999999 79999999999 69999999875432 5899999 9999999
Q ss_pred Cc--chHHHHHhhhhc
Q 020284 302 RE--KGSYSLSNYLQV 315 (328)
Q Consensus 302 ~~--~g~~~~~~~~~~ 315 (328)
++ +|.+++++||++
T Consensus 434 ~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 434 RFTSVGTAAIERFLRP 449 (454)
T ss_pred ccccccHHHHHHhccc
Confidence 99 799999999996
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-65 Score=490.74 Aligned_cols=294 Identities=26% Similarity=0.311 Sum_probs=268.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.+ +..++.|+++|+|.||||+++|+.|.
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr~i~ 237 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAERLA 237 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999996555 45688899999999999999999998
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCC-CHHHHHHHHHHHHHhhcCCCccCCCeeEEcccc-hHHHHHHHHHHHhhcccC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVG 159 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~da-d~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~l~~~~~~~~~g 159 (328)
..++ +++.+|+||+||+||++|+ |++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.++++++|
T Consensus 238 ~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g 313 (489)
T cd07126 238 LELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLE 313 (489)
T ss_pred HHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccC
Confidence 8764 4689999999999999999 999999999999999999999999999999995 689999999999999987
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHh-CCCeEeeCCcccCC----CC-ceecceeeec------CCCCCcccCcce
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGA----KG-YYIKPTVFTG------VKDDMLIAKDEI 227 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~-~ga~~~~gg~~~~~----~g-~~~~Ptvl~~------~~~~~~~~~~E~ 227 (328)
+ +++||+++.. .+++.++++++++ +|+++++||...+. .+ .|++|||+.. ++++|.+++||+
T Consensus 314 ~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEi 387 (489)
T cd07126 314 D-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEV 387 (489)
T ss_pred C-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCC
Confidence 5 4899999998 9999999999997 89999999975432 23 3899999852 567999999999
Q ss_pred ecceEEeEeecC--hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeE--EEEcCCCCCCCC----CCccCCCCCC
Q 020284 228 FGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS--VWINCFDVFDAA----IPFGGYKQSG 299 (328)
Q Consensus 228 fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~--v~iN~~~~~~~~----~p~gG~~~SG 299 (328)
||||++|++|+| ++||++++|+++|||++||||+|.++++++++++++|. |+||+.++..+. .||||+|+||
T Consensus 388 FGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg 467 (489)
T cd07126 388 FGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAG 467 (489)
T ss_pred cCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccC
Confidence 999999999999 89999999999999999999999999999999999999 668987766554 8999999999
Q ss_pred CCCcchH
Q 020284 300 QGREKGS 306 (328)
Q Consensus 300 ~g~~~g~ 306 (328)
+|+++..
T Consensus 468 ~g~~~~~ 474 (489)
T cd07126 468 IGTPEAI 474 (489)
T ss_pred CCCHhHH
Confidence 9998754
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-64 Score=482.12 Aligned_cols=304 Identities=25% Similarity=0.322 Sum_probs=277.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCC-CCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL-PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~agl-p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|.++..+.++++++|+ |+|++++++++++ .+..|+.||++|.|+||||+.+++.|
T Consensus 117 ~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i 195 (442)
T cd07084 117 PLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKL 195 (442)
T ss_pred HHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHH
Confidence 467899999999999999999999999999999999998 9999999999655 88999999999999999999999999
Q ss_pred HHHHhhCCCCcceeccCCCCceecCCCC-CHHHHHHHHHHHHHhhcCCCccCCCeeEEccc-chHHHHHHHHHHHhhccc
Q 020284 81 LQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVV 158 (328)
Q Consensus 81 ~~~~a~~~~~~~~~e~gG~~~~iV~~da-d~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~~~~~~ 158 (328)
++.+++ +|+++|+|||||+||++|+ |+|.+++.+++++|.++||.|++++++|||++ ++|+|+++|.++++++++
T Consensus 196 ~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~ 272 (442)
T cd07084 196 ALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKL 272 (442)
T ss_pred HHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhccc
Confidence 997753 7999999999999999999 69999999999999999999999999999999 999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHhC-CCeEeeCCcccC------CCCceecceeeecCCCCC---cccCccee
Q 020284 159 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLG------AKGYYIKPTVFTGVKDDM---LIAKDEIF 228 (328)
Q Consensus 159 g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~-ga~~~~gg~~~~------~~g~~~~Ptvl~~~~~~~---~~~~~E~f 228 (328)
| ++.+||++++ ++.++++++.++ |+++++||...+ ..|+|+.|||+.++++++ .+++||+|
T Consensus 273 g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~F 343 (442)
T cd07084 273 E-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIF 343 (442)
T ss_pred C-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEEecCcccccchHHheecc
Confidence 8 6789998765 456667777777 589999987422 248999999999999887 99999999
Q ss_pred cceEEeEeecC--hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCC-CC-CCCCCCccC-CCCCCCCC
Q 020284 229 GPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCF-DV-FDAAIPFGG-YKQSGQGR 302 (328)
Q Consensus 229 gPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~-~~-~~~~~p~gG-~~~SG~g~ 302 (328)
|||++|++|+| ++|+++++|+++|||+++|||+|.+.++++++++ ++|+||||+. +. ..+..|||| .|.||+|+
T Consensus 344 GPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~ 423 (442)
T cd07084 344 GPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGA 423 (442)
T ss_pred CceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCc
Confidence 99999999999 9999999999999999999999999999999999 9999999976 33 345678866 88999999
Q ss_pred cc-hHHHHHhhhhceEE
Q 020284 303 EK-GSYSLSNYLQVKAV 318 (328)
Q Consensus 303 ~~-g~~~~~~~~~~k~i 318 (328)
+. |.+++++||+++.+
T Consensus 424 ~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 424 GIGGPEAIKLVWRCHAE 440 (442)
T ss_pred cccchHHhhheeeeeee
Confidence 96 99999999987643
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-64 Score=476.59 Aligned_cols=293 Identities=21% Similarity=0.248 Sum_probs=262.0
Q ss_pred CchhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHH
Q 020284 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 76 (328)
Q Consensus 1 ~~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~ 76 (328)
++++++++||++||+||+|||+.+|.++..++++++ ++|+|+|++|++++++.+.++.|++||++|+|+||||+.+
T Consensus 113 ~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~ 192 (429)
T cd07121 113 TIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAV 192 (429)
T ss_pred HHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHH
Confidence 357899999999999999999999999999998874 7899999999999876778899999999999999999999
Q ss_pred HHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 77 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 77 ~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
|+.|++. .+|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++++|||++++|+|+++|+++ .
T Consensus 193 g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~-- 264 (429)
T cd07121 193 VKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G-- 264 (429)
T ss_pred HHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--
Confidence 9999874 4899999999999999999999999999999999999999999999999999999999999885 1
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhC--CCeEeeCCccc---CCCCceec---ceeeecCCCCCcccCccee
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG--GAKLETGGERL---GAKGYYIK---PTVFTGVKDDMLIAKDEIF 228 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~--ga~~~~gg~~~---~~~g~~~~---Ptvl~~~~~~~~~~~~E~f 228 (328)
.++++.++.++++++++++.+. |++++.||... +..|.|+. |||+.+++++|.++++|+|
T Consensus 265 ------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~F 332 (429)
T cd07121 265 ------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQM 332 (429)
T ss_pred ------------CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccc
Confidence 2479999999999999998864 68999888531 12477877 4999999999999999999
Q ss_pred cceEEeEeecChhHHHHHhhcCCCCc--eEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCC--CCcc
Q 020284 229 GPVQSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ--GREK 304 (328)
Q Consensus 229 gPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~--g~~~ 304 (328)
|||++|++|+|++||++++|.++||| +++|||+|.+.++++++++++|+||||++.. +.+||||+|.|++ |..-
T Consensus 333 gPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~ 410 (429)
T cd07121 333 MPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPT 410 (429)
T ss_pred cceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcCCCc--CccccCCCccceEEecCCc
Confidence 99999999999999999999999998 9999999999999999999999999998654 6799999999998 5444
Q ss_pred hHHHHHhhhhceEEE
Q 020284 305 GSYSLSNYLQVKAVV 319 (328)
Q Consensus 305 g~~~~~~~~~~k~i~ 319 (328)
| +|+ +..|+++
T Consensus 411 ~-~~~---~~~~~~~ 421 (429)
T cd07121 411 G-EGL---TSARTFT 421 (429)
T ss_pred C-cCc---cChhhhh
Confidence 4 343 4444443
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-63 Score=469.76 Aligned_cols=272 Identities=21% Similarity=0.252 Sum_probs=248.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCch-hHHHHhhhcCCcCeEEEeCCHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTT 76 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~-~~~~~l~~~~~v~~v~ftGs~~~ 76 (328)
.++++++||++||+||+|||+.+|.++..++++++ ++|+|+|++|++++.+. +.++.|.+||++|+|+||||+.+
T Consensus 124 ~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~ 203 (406)
T cd07079 124 TVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGL 203 (406)
T ss_pred HHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHH
Confidence 56899999999999999999999999999999887 78999999999998543 67888999999999999999999
Q ss_pred HHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 77 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 77 ~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++++|||+++||+|+++|++++++
T Consensus 204 G~~i~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~- 277 (406)
T cd07079 204 IRFVVENA----TIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE- 277 (406)
T ss_pred HHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH-
Confidence 99998765 68999999999999999999999999999999999999 9999999999999999999999997764
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
.|++++ +|... ..|++|| ++++|.+++||+||||++|++
T Consensus 278 ---------------------------------~ga~~~-~g~~~---~~~~~pt----v~~d~~i~~eE~FGPVl~v~~ 316 (406)
T cd07079 278 ---------------------------------AGVELR-GDEET---LAILPGA----KPATEEDWGTEYLDLILAVKV 316 (406)
T ss_pred ---------------------------------CCCEEe-cCHHH---HHhcccc----cCCCcchhhhhhhCceeEEEE
Confidence 255654 33211 1377888 688999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCC----CCcchHHHHHhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ----GREKGSYSLSNY 312 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~----g~~~g~~~~~~~ 312 (328)
|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||+++...+.+||||.|.||+ |+++|.+++++|
T Consensus 317 ~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~ 396 (406)
T cd07079 317 VDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEEL 396 (406)
T ss_pred eCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHh
Confidence 9999999999999999999999999999999999999999999999877667789999999988 899999999999
Q ss_pred hhceEEEE
Q 020284 313 LQVKAVVT 320 (328)
Q Consensus 313 ~~~k~i~~ 320 (328)
|+.|++..
T Consensus 397 ~~~k~i~~ 404 (406)
T cd07079 397 TTYKYIVR 404 (406)
T ss_pred cEEEEEEe
Confidence 99999865
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-62 Score=470.09 Aligned_cols=296 Identities=22% Similarity=0.234 Sum_probs=261.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|.++..++++++ ++|+|+|+++++++++.+.++.|++||++|+|+||||+.+|
T Consensus 146 ~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G 225 (465)
T PRK15398 146 IINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVV 225 (465)
T ss_pred HHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHH
Confidence 57899999999999999999999999999999876 68999999999998667788999999999999999999999
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+.|++ . .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++
T Consensus 226 ~~v~~----~-~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~----- 295 (465)
T PRK15398 226 KAAMK----S-GKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN----- 295 (465)
T ss_pred HHHHH----c-CCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc-----
Confidence 99987 2 6899999999999999999999999999999999999999999999999999999999999885
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcc---cCCCCcee---cceeeecCCCCCcccCcceecce
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---LGAKGYYI---KPTVFTGVKDDMLIAKDEIFGPV 231 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~---~~~~g~~~---~Ptvl~~~~~~~~~~~~E~fgPv 231 (328)
..|+++..++++++++++++.+++++++.|+.. .+..|.++ .|||+.++++++++++||+||||
T Consensus 296 ----------~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPV 365 (465)
T PRK15398 296 ----------GAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPV 365 (465)
T ss_pred ----------CCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCce
Confidence 137999999999999998654445566666542 11246655 37999999999999999999999
Q ss_pred EEeEeecChhHHHHHhhcCCCCc--eEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHH
Q 020284 232 QSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSL 309 (328)
Q Consensus 232 l~v~~~~~~~eai~~~n~~~~gl--~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~ 309 (328)
++|++|+|++||++++|+++||| +++|||+|.+.++++++++++|.|+||++.. +.+||||+|.|.+ +.+|+.|
T Consensus 366 l~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~~-~~~~~~g- 441 (465)
T PRK15398 366 LPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPSY--AGLGLGGEGFTTF-TIATPTG- 441 (465)
T ss_pred EEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCCc--cccCcCCCCCcee-eecccCC-
Confidence 99999999999999999999988 9999999999999999999999999997643 6799999999985 2336666
Q ss_pred HhhhhceEEEEe
Q 020284 310 SNYLQVKAVVTA 321 (328)
Q Consensus 310 ~~~~~~k~i~~~ 321 (328)
...|..|++..+
T Consensus 442 ~~~~~~~~~~~~ 453 (465)
T PRK15398 442 EGVTSARTFTRR 453 (465)
T ss_pred CCccchhhhhhh
Confidence 666666665544
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-62 Score=464.08 Aligned_cols=273 Identities=22% Similarity=0.269 Sum_probs=246.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCc-hhHHHHhhhcCCcCeEEEeCCHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTT 76 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l----~~aglp~g~v~~v~~~~-~~~~~~l~~~~~v~~v~ftGs~~~ 76 (328)
+++++++||++||+||+|||+.+|.++..+++++ +++|+|+|++|++++.+ .+.+..|.+||++|+|+||||+.+
T Consensus 130 ~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~ 209 (417)
T PRK00197 130 TVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGL 209 (417)
T ss_pred HHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHH
Confidence 5688999999999999999999999999998885 68899999999999644 457788889999999999999999
Q ss_pred HHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 77 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 77 ~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
|+.+++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++++|||++++|+|+++|.++++++
T Consensus 210 g~~i~~~a----~~~~~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 284 (417)
T PRK00197 210 IRRVVENA----TVPVIEHGDGICHIYVDESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEA 284 (417)
T ss_pred HHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHC
Confidence 99998754 68999999999999999999999999999999999999 99999999999999999999999999877
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
+++ ++ ++... .+ |+ |||+ ++++.+++||+||||++|++
T Consensus 285 ~~~----------------------------------~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~ 322 (417)
T PRK00197 285 GVE----------------------------------LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKV 322 (417)
T ss_pred CCe----------------------------------Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEE
Confidence 532 11 11100 12 22 9998 46789999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNY 312 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g----~~~g~~~~~~~ 312 (328)
|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+..||||.|.||+| +++|.+++++|
T Consensus 323 ~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~ 402 (417)
T PRK00197 323 VDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEEL 402 (417)
T ss_pred eCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhh
Confidence 99999999999999999999999999999999999999999999998766778899999999999 99999999999
Q ss_pred hhceEEEEe
Q 020284 313 LQVKAVVTA 321 (328)
Q Consensus 313 ~~~k~i~~~ 321 (328)
|+.|++++.
T Consensus 403 ~~~k~v~~~ 411 (417)
T PRK00197 403 TTYKYIVLG 411 (417)
T ss_pred cEEEEEEEC
Confidence 999999874
|
|
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-61 Score=463.86 Aligned_cols=301 Identities=20% Similarity=0.291 Sum_probs=260.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhHHHHhhhcCCcCeEEEeCCHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTT 76 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~----~l~~~l~~aglp~g~v~~v~~~-~~~~~~~l~~~~~v~~v~ftGs~~~ 76 (328)
+.+++++||++||+||||||+.+|+++. ++.++|.++|+|+|+||++++. +.+.++.|+.||+++.|.||||+.+
T Consensus 210 ~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~ 289 (551)
T TIGR02288 210 TYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289 (551)
T ss_pred HHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHH
Confidence 4689999999999999999999999665 6779999999999999999984 6778999999999999999999999
Q ss_pred HHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEccc---------chHHHHH
Q 020284 77 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVE 147 (328)
Q Consensus 77 ~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~---------~~~~f~~ 147 (328)
|++|++.++ .+++++|+|||||+||++|+|++.+++.+++++|.|+||.|++++++|||++ ++|+|++
T Consensus 290 G~~I~~~aa---~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~ 366 (551)
T TIGR02288 290 GQWLEQNAR---QAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAA 366 (551)
T ss_pred HHHHHHhcc---cCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHH
Confidence 999999775 4689999999999999999999999999999999999999999999999999 7999999
Q ss_pred HHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC---CCC-ceecceeeecCCCCCccc
Q 020284 148 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKG-YYIKPTVFTGVKDDMLIA 223 (328)
Q Consensus 148 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~---~~g-~~~~Ptvl~~~~~~~~~~ 223 (328)
+|+++++++ +|+|.++.+.+||++++++++|+ +++++.| +++++|.... ..| +|++|||+....++|.++
T Consensus 367 ~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~ 440 (551)
T TIGR02288 367 DLATAIDGL-LGDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAY 440 (551)
T ss_pred HHHHHHHHh-cCCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHH
Confidence 999999999 99999999999999999999996 5566678 5666665321 134 688999995444589999
Q ss_pred CcceecceEEeEeecChhHHHHHhhcC--CCC-ceEEEecCCHHHHHHHHHhc----------ceeEEEEcCCCCCCCCC
Q 020284 224 KDEIFGPVQSILKYKDLDEVIQRSNAS--QYG-LAAGVFTHNLDTANTLMRAL----------RVGSVWINCFDVFDAAI 290 (328)
Q Consensus 224 ~~E~fgPvl~v~~~~~~~eai~~~n~~--~~g-l~~~v~t~d~~~~~~~~~~l----------~~g~v~iN~~~~~~~~~ 290 (328)
+||+||||++|++|+|.+|||+++|++ +|| |+++|||+|.+.++++.+++ ++|.|+||.. .
T Consensus 441 ~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~------~ 514 (551)
T TIGR02288 441 MQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQS------A 514 (551)
T ss_pred hCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccC------C
Confidence 999999999999999999999999998 556 99999999999999999999 6666666653 4
Q ss_pred CccCCCCCCCCCcc-hHHHHHhhhhceE
Q 020284 291 PFGGYKQSGQGREK-GSYSLSNYLQVKA 317 (328)
Q Consensus 291 p~gG~~~SG~g~~~-g~~~~~~~~~~k~ 317 (328)
+|++.+.||..... ..+.-..|...|-
T Consensus 515 ~~~~~~~sg~n~~a~~~~~~~~~~~~r~ 542 (551)
T TIGR02288 515 AFSDFHGTGGNPAANASLSDGAFVANRF 542 (551)
T ss_pred CCCCCCCCCCCCccCCcccchhhhhcce
Confidence 57788878765433 3444445555443
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-61 Score=427.18 Aligned_cols=318 Identities=35% Similarity=0.608 Sum_probs=300.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~----l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+...+.+||-+||++|+|-|+.+.+++....++ |+..|-|+++|+++++ =++.++.|++|++++++.|.||..++
T Consensus 205 ~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itc-lpd~a~~ltSh~g~khitFiGSqpva 283 (583)
T KOG2454|consen 205 ILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITC-LPDTAEALTSHSGVKHITFIGSQPVA 283 (583)
T ss_pred hhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeec-CcchHhHhhcCCCcceEEEecCcHHH
Confidence 356789999999999999999999998765554 5566999999999999 45788999999999999999999999
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+.|++.+++. ++|+++|+|||++.|+++|+|+++.+.-++++.|..+||.|...+|++||+++||.|+..|.++++.++
T Consensus 284 k~i~~~AAk~-LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r 362 (583)
T KOG2454|consen 284 KMIMRNAAKT-LTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVR 362 (583)
T ss_pred HHHHHhhhhh-cCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHH
Confidence 9999999985 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEE
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 233 (328)
.|.|.....+||.+++..+++.+++++++|+++|+++..||.+.. +.|.|+.||++.+++++|.+.+||.|||++.
T Consensus 363 ~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~ 442 (583)
T KOG2454|consen 363 AGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMP 442 (583)
T ss_pred cCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchh
Confidence 999999999999999999999999999999999999999998543 5689999999999999999999999999999
Q ss_pred eEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhh
Q 020284 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNY 312 (328)
Q Consensus 234 v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~ 312 (328)
++++.+.|++++++|.++|||.++||+.|..+++++++++++|.|.||+..++ .-++||||.|.||+|+..|.+|++..
T Consensus 443 im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~ 522 (583)
T KOG2454|consen 443 IMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGC 522 (583)
T ss_pred hhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998765 46799999999999999999999999
Q ss_pred hhceEEEEe
Q 020284 313 LQVKAVVTA 321 (328)
Q Consensus 313 ~~~k~i~~~ 321 (328)
+..|+|...
T Consensus 523 Cn~Ksv~yd 531 (583)
T KOG2454|consen 523 CNVKSVAYD 531 (583)
T ss_pred hcccceecc
Confidence 999999654
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-60 Score=455.16 Aligned_cols=299 Identities=17% Similarity=0.235 Sum_probs=258.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
++++++|||++||+||+|||+.+|+++..+++++. ++|+|+|++|++++.+.+.++.|+.||++++|.||||+.+
T Consensus 112 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v- 190 (439)
T cd07081 112 VIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAV- 190 (439)
T ss_pred HHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHH-
Confidence 57899999999999999999999999988888775 6799999999999877778999999999999999999984
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
++.+++ +.+|+++|+|||+|+||++|||++.|++.+++++|.++||.|++.+|+|||++++|+|+++|.++
T Consensus 191 ---~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~----- 261 (439)
T cd07081 191 ---VKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQ----- 261 (439)
T ss_pred ---HHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHc-----
Confidence 555666 48999999999999999999999999999999999999999999999999999999999999884
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCc-c-cCCCCceecce---eeecCC--CCCcccCcceecc
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-R-LGAKGYYIKPT---VFTGVK--DDMLIAKDEIFGP 230 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~-~-~~~~g~~~~Pt---vl~~~~--~~~~~~~~E~fgP 230 (328)
+||+++.+++++++++|+++.++|++++.|+. . ....|.|+.|| ++.+++ ++|.+++||+|||
T Consensus 262 ----------~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGP 331 (439)
T cd07081 262 ----------GAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSP 331 (439)
T ss_pred ----------CCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCc
Confidence 38999999999999999999999997754432 1 11358899998 888888 8999999999999
Q ss_pred eEEeEeecChhHHHHHhhcC----CCCceEEEecCC---HHHHHHHHHhcceeEEEEcCCC-CC--CCCCCccCCCCCC-
Q 020284 231 VQSILKYKDLDEVIQRSNAS----QYGLAAGVFTHN---LDTANTLMRALRVGSVWINCFD-VF--DAAIPFGGYKQSG- 299 (328)
Q Consensus 231 vl~v~~~~~~~eai~~~n~~----~~gl~~~v~t~d---~~~~~~~~~~l~~g~v~iN~~~-~~--~~~~p~gG~~~SG- 299 (328)
|++|++|+|++||++++|++ +|||+++|||+| .++++++++++++|.||||.+. .. .-..-|||++.+-
T Consensus 332 Vl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~ 411 (439)
T cd07081 332 VLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTL 411 (439)
T ss_pred eEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCccccccccccCCCCCeeEee
Confidence 99999999999999999965 799999999999 9999999999999999999765 22 2334566666542
Q ss_pred -CCCcchHH-----HHHhhhhceEEEE
Q 020284 300 -QGREKGSY-----SLSNYLQVKAVVT 320 (328)
Q Consensus 300 -~g~~~g~~-----~~~~~~~~k~i~~ 320 (328)
.|..+|.. +..+|++.|.+..
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 412 GCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred ecCCCCCCCcCCCCChHhhheeeeeec
Confidence 22222221 3567787777654
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-60 Score=458.72 Aligned_cols=308 Identities=18% Similarity=0.251 Sum_probs=269.7
Q ss_pred hhhhHHHHhcCCeEEEeCCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 3 AWKVGPALACGNTIVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 3 ~~~~~~ALaaGn~vVlkps~~~~~t~~----~l~~~l~~aglp~g~v~~v~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
.+++++||++||+||||||+.+|+++. .+.++|.++|+|+|+||++++. +.+.++.|+.||+++.|.||||+.+|
T Consensus 211 ~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G 290 (549)
T cd07127 211 YPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFG 290 (549)
T ss_pred HHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHH
Confidence 678999999999999999999998864 4668999999999999999984 46788999999999999999999999
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEccc---------chHHHHHH
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEK 148 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~---------~~~~f~~~ 148 (328)
++|++.++ .+|+++|+||||++||++|+|++.+++.+++++|.++||.|++++++|||++ ++|+|+++
T Consensus 291 ~~i~~~a~---~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~ 367 (549)
T cd07127 291 DWLEANAR---QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAAD 367 (549)
T ss_pred HHHHHHhc---cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHH
Confidence 99999885 4689999999999999999999999999999999999999999999999999 89999999
Q ss_pred HHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC---CCC-ceecceeeecCCCCCcccC
Q 020284 149 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKG-YYIKPTVFTGVKDDMLIAK 224 (328)
Q Consensus 149 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~---~~g-~~~~Ptvl~~~~~~~~~~~ 224 (328)
|+++++++ +|+|.+..+.+||++++++++|+++. ++.|. +++||.... ..| ++++|||+.+.++++.+++
T Consensus 368 L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~a----~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~ 441 (549)
T cd07127 368 LAAAIDGL-LADPARAAALLGAIQSPDTLARIAEA----RQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYA 441 (549)
T ss_pred HHHHHHHh-cCCccccccccCCcCCHHHHHHHHHH----HhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHc
Confidence 99999999 99999999999999999999998654 45565 777776432 134 4669999998888999999
Q ss_pred cceecceEEeEeecChhHHHHHhhcCC--C-CceEEEecCCHHHHHHHHHhc-ce-eEEEEcCCCCCCCCCC--ccCCCC
Q 020284 225 DEIFGPVQSILKYKDLDEVIQRSNASQ--Y-GLAAGVFTHNLDTANTLMRAL-RV-GSVWINCFDVFDAAIP--FGGYKQ 297 (328)
Q Consensus 225 ~E~fgPvl~v~~~~~~~eai~~~n~~~--~-gl~~~v~t~d~~~~~~~~~~l-~~-g~v~iN~~~~~~~~~p--~gG~~~ 297 (328)
||+||||++|++|+|.+|+++++|++. + ||+++|||+|.+.++++.+++ .+ |.++||.......++| |||++.
T Consensus 442 eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~ 521 (549)
T cd07127 442 EERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHG 521 (549)
T ss_pred CCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCC
Confidence 999999999999999999999999974 4 699999999999999999995 44 5999996655444555 999999
Q ss_pred CCCCCc-chHHHHHhhhhceEEE
Q 020284 298 SGQGRE-KGSYSLSNYLQVKAVV 319 (328)
Q Consensus 298 SG~g~~-~g~~~~~~~~~~k~i~ 319 (328)
||.... +..+....|...|--+
T Consensus 522 sg~n~~a~~~~~~~~fv~~r~~~ 544 (549)
T cd07127 522 TGANPAANAALTDGAFVANRFRV 544 (549)
T ss_pred CCCCcccccccchhhhhhcceEE
Confidence 998744 4555556676655433
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-59 Score=447.71 Aligned_cols=298 Identities=18% Similarity=0.181 Sum_probs=264.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHH----HHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYV----SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l----~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|.++..+ .++++++|+|+|++|++++++.+.++.|++||++|+|.||||+.++
T Consensus 121 ~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~ 200 (488)
T TIGR02518 121 AIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMV 200 (488)
T ss_pred HHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHH
Confidence 568899999999999999999999999984 5556889999999999998778889999999999999999999976
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHH-----
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL----- 152 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~----- 152 (328)
+.+ +. +.+|+++|+|||+|+||++|||++.|++.+++++|+++||.|++.+++|||++++|+|+++|+++
T Consensus 201 ~~a----~~-~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~ 275 (488)
T TIGR02518 201 KAA----YS-SGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFL 275 (488)
T ss_pred HHH----HH-cCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhc
Confidence 533 33 48999999999999999999999999999999999999999999999999999999999999998
Q ss_pred --HhhcccCCC-CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceec
Q 020284 153 --AMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFG 229 (328)
Q Consensus 153 --~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 229 (328)
.+.+++|+| .++++++||+++.++++++.++++.++.+|+++++||.. .+.+++++ ++|+||
T Consensus 276 ~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~--------------~v~~~~~~-~~E~fg 340 (488)
T TIGR02518 276 TAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQN--------------GVGNKNPY-SREKLT 340 (488)
T ss_pred CHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEEEeCCC--------------CCCCCCcc-ccCccC
Confidence 899999996 678899999999999999999999999999999998852 24566665 799999
Q ss_pred ceEEeEeecChhHHHHHhhc----CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC---------CCCCCC--ccC
Q 020284 230 PVQSILKYKDLDEVIQRSNA----SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV---------FDAAIP--FGG 294 (328)
Q Consensus 230 Pvl~v~~~~~~~eai~~~n~----~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~---------~~~~~p--~gG 294 (328)
||++|++|+|++|||+++|+ ++|||+++|||+|.+.+++|++++++|+||||++.. +.+.+- ||+
T Consensus 341 PVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~ 420 (488)
T TIGR02518 341 TILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGA 420 (488)
T ss_pred ceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccc
Confidence 99999999999999999887 689999999999999999999999999999996532 122222 556
Q ss_pred CCCCCCCCcchHHHHHhhhhceEEEEeC
Q 020284 295 YKQSGQGREKGSYSLSNYLQVKAVVTAL 322 (328)
Q Consensus 295 ~~~SG~g~~~g~~~~~~~~~~k~i~~~~ 322 (328)
++.+++. + +-+++++++.|++....
T Consensus 421 ~~g~st~--~-~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 421 VGGSSTS--D-NITPENLINIRRVAYGV 445 (488)
T ss_pred cCCCcCC--C-CCCHHHhheeeEEEecc
Confidence 6655555 2 77889999999988776
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-58 Score=461.34 Aligned_cols=267 Identities=19% Similarity=0.247 Sum_probs=243.5
Q ss_pred hhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCc----EEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHH
Q 020284 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV----LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 79 (328)
Q Consensus 4 ~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~----v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 79 (328)
++++|||++||+||+|||+.+|+++..|+++++++ +|+|+ +|+|++ +.+.+..|..||++|+|+||||+..++
T Consensus 422 ~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~i~- 498 (718)
T PLN02418 422 QIASLAIRSGNGLLLKGGKEAARSNAILHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKLVS- 498 (718)
T ss_pred HHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHHHH-
Confidence 79999999999999999999999999999999999 99996 999997 567889999999999999999996544
Q ss_pred HHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccC
Q 020284 80 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 159 (328)
Q Consensus 80 v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g 159 (328)
+.++. +++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++.+|+|||+++||+ |
T Consensus 499 --~~aa~-~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~--------------G 560 (718)
T PLN02418 499 --QIKAS-TKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN--------------G 560 (718)
T ss_pred --HHHHh-cCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc--------------c
Confidence 44555 4899999999999999999999999999999999999 9999999999999999987 1
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
++.+++++++++|+++ +||...+ | ++. + ++|.+++||+||||+++++|+|
T Consensus 561 -------------------~~~~~i~~a~~~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~ 610 (718)
T PLN02418 561 -------------------GLNDLLVALRSAGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDD 610 (718)
T ss_pred -------------------cHHHHHHHHHHCCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECC
Confidence 3578999999999999 6775432 3 233 3 7899999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCC--CCcc--hHHHHHhhhhc
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ--GREK--GSYSLSNYLQV 315 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~--g~~~--g~~~~~~~~~~ 315 (328)
++|||+++|+++|||+++|||+|.+++.++++++++|.||||+++...+..||||+|+||+ |+.+ |++++++||+.
T Consensus 611 ~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~ 690 (718)
T PLN02418 611 VHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTT 690 (718)
T ss_pred HHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcE
Confidence 9999999999999999999999999999999999999999999876667889999999999 9775 99999999999
Q ss_pred eEEEEe
Q 020284 316 KAVVTA 321 (328)
Q Consensus 316 k~i~~~ 321 (328)
|++++.
T Consensus 691 K~v~~g 696 (718)
T PLN02418 691 RWILRG 696 (718)
T ss_pred EEEEEC
Confidence 999765
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-59 Score=418.86 Aligned_cols=314 Identities=30% Similarity=0.475 Sum_probs=293.4
Q ss_pred hHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHHHHHh
Q 020284 6 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 85 (328)
Q Consensus 6 ~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a 85 (328)
.+|||+ ||.|+||||..+.++++++.++|++||+|+|++|+|++++...++.+..+|++.++.||||..+-+.++++.+
T Consensus 218 ~aPaLM-GN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~ 296 (561)
T KOG2455|consen 218 GAPALM-GNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVG 296 (561)
T ss_pred cChhhh-cceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHH
Confidence 468885 9999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hC-----CCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 86 KS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 86 ~~-----~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+. ...+++.|+||||-.+|+++||++.++...++++|.++||.|.+.+|+||++++++.+.+.|.+.-+++++|+
T Consensus 297 ~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd 376 (561)
T KOG2455|consen 297 ENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGD 376 (561)
T ss_pred hhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCC
Confidence 62 2467999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCccccccCCHHHHHHHHHHHHHHHhC-CCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 161 P-FKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 161 ~-~~~~~~~gpl~~~~~~~~~~~~l~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
| .|.++++||+|+.+.+.|++++|+.++.. ..++++||..++..|+|+.|||+...+|.++++.||+||||++|+.|+
T Consensus 377 ~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~ 456 (561)
T KOG2455|consen 377 PVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYE 456 (561)
T ss_pred ccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEec
Confidence 7 88899999999999999999999998774 468999999999999999999999999999999999999999999998
Q ss_pred C--hhHHHHHh-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHH
Q 020284 239 D--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLS 310 (328)
Q Consensus 239 ~--~~eai~~~-n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~~~~~ 310 (328)
| ++|++.++ |.++|+|+.+||++|.+.+++..++|+ +|+.|||+..+. ..++||||.+.||+. ..+|++-+.
T Consensus 457 Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~ 536 (561)
T KOG2455|consen 457 DDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLL 536 (561)
T ss_pred cccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEE
Confidence 4 88999999 678999999999999999999999986 899999997665 478999999999976 668999999
Q ss_pred hhhhceEEEE
Q 020284 311 NYLQVKAVVT 320 (328)
Q Consensus 311 ~~~~~k~i~~ 320 (328)
+|+.+++|-.
T Consensus 537 RwtSp~~ikE 546 (561)
T KOG2455|consen 537 RWTSPLSIKE 546 (561)
T ss_pred eecCcchhhh
Confidence 9999887643
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-58 Score=469.99 Aligned_cols=305 Identities=18% Similarity=0.296 Sum_probs=272.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|.++..++++++ ++|+|+|+||++++++.+.++.|++|+++|+|+||||+.++
T Consensus 125 ~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~ 204 (862)
T PRK13805 125 AIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV 204 (862)
T ss_pred HHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH
Confidence 56899999999999999999999999999888865 67999999999998777889999999999999999999975
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+ .++. +++|++.|+|||+|+||++|||++.|++.|++++|+|+||.|+++++||||++++|+|+++|+++
T Consensus 205 ~----~a~~-~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~----- 274 (862)
T PRK13805 205 K----AAYS-SGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH----- 274 (862)
T ss_pred H----HHHh-cCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh-----
Confidence 4 4444 48999999999999999999999999999999999999999999999999999999999999885
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeE-eeCCccc---CCCCceeccee------eecCCCCCcccCcce
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL-ETGGERL---GAKGYYIKPTV------FTGVKDDMLIAKDEI 227 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~-~~gg~~~---~~~g~~~~Ptv------l~~~~~~~~~~~~E~ 227 (328)
.+|+++.+++++++++++++.+.|+.. +.||... ...|.++.|++ +.++++++.+.+ |+
T Consensus 275 ----------g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~ 343 (862)
T PRK13805 275 ----------GAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EK 343 (862)
T ss_pred ----------CCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cc
Confidence 368999999999999999886655432 4455321 12478889987 667888999777 89
Q ss_pred ecceEEeEeecChhHHHHHhhc----CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCC----------CCCCCCCcc
Q 020284 228 FGPVQSILKYKDLDEVIQRSNA----SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD----------VFDAAIPFG 293 (328)
Q Consensus 228 fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~----------~~~~~~p~g 293 (328)
||||++|++|+|++|||+++|+ +++||+++|||+|.+.++++++++++|+|+||.+. .+.+.+|||
T Consensus 344 fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG 423 (862)
T PRK13805 344 LSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLG 423 (862)
T ss_pred cCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCcccccc
Confidence 9999999999999999999988 47999999999999999999999999999999875 357899999
Q ss_pred CCCCCCCCCcchHHHHHhhhhceEEEEeCCCCCCC
Q 020284 294 GYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 328 (328)
Q Consensus 294 G~~~SG~g~~~g~~~~~~~~~~k~i~~~~~~~~~~ 328 (328)
| |.||.|.++|+.|+++|++.|++..+...+.||
T Consensus 424 ~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~~~~~~ 457 (862)
T PRK13805 424 C-GSWGGNSVSENVGAKHLLNIKTVAKRRENMQWF 457 (862)
T ss_pred c-cCCCCCcCCCCCCHHHhheeeeeeeccccceee
Confidence 7 999999999999999999999999887777775
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-57 Score=434.04 Aligned_cols=264 Identities=20% Similarity=0.274 Sum_probs=237.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
++|++++||++||+||+|||+.+|+++..++++++ ++|+|+|++|++++.+.+.++.|++||++|+|+||||++++
T Consensus 112 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~ 191 (436)
T cd07122 112 AIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMV 191 (436)
T ss_pred HHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHH
Confidence 57899999999999999999999999999888765 78999999999998777788999999999999999999976
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc-
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR- 156 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~- 156 (328)
+ .+++ +.+|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++...+
T Consensus 192 ~----~a~~-~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 266 (436)
T cd07122 192 K----AAYS-SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFL 266 (436)
T ss_pred H----HHHh-cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceec
Confidence 4 3444 489999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred ------ccCCC-CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceec
Q 020284 157 ------VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFG 229 (328)
Q Consensus 157 ------~~g~~-~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 229 (328)
++|++ .+.++.+||+++..+.+++.+++..+..+|++++.++ +.+++++|.++ +|.||
T Consensus 267 ~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~--------------~~~v~~~~~~~-~E~FG 331 (436)
T cd07122 267 NEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE--------------ETGVGPEEPLS-REKLS 331 (436)
T ss_pred CHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe--------------cCCCCCCCcch-hcccC
Confidence 88888 4677889999999888888877776666666666544 35677888877 56899
Q ss_pred ceEEeEeecChhHHHHHhhcC----CCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC
Q 020284 230 PVQSILKYKDLDEVIQRSNAS----QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 285 (328)
Q Consensus 230 Pvl~v~~~~~~~eai~~~n~~----~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 285 (328)
||++|++|+|++||++++|++ +|||+++|||+|.++++++++++++|.||||+++.
T Consensus 332 PVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~ 391 (436)
T cd07122 332 PVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSS 391 (436)
T ss_pred CeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCcc
Confidence 999999999999999999997 79999999999999999999999999999998764
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-55 Score=440.50 Aligned_cols=270 Identities=17% Similarity=0.204 Sum_probs=239.2
Q ss_pred hhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCC----cEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG----VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 3 ~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g----~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
++++++||++||+||+|||+.+|.++..|+++++++ +|+| +++++++ .++.++.|..||++|+|+||||+.+|+
T Consensus 413 ~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~ 490 (715)
T TIGR01092 413 VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVS 490 (715)
T ss_pred HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHH
Confidence 478999999999999999999999999999999999 9987 6899985 567788899999999999999999999
Q ss_pred HHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhccc
Q 020284 79 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 158 (328)
Q Consensus 79 ~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~ 158 (328)
.|++.++ +|+++|+|||||+||++|||++.|++.++.++|.+ ||.|++++++|||++++|+
T Consensus 491 ~i~~~A~----~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------- 551 (715)
T TIGR01092 491 QIKKSTK----IPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------- 551 (715)
T ss_pred HHHHhCC----CCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc--------------
Confidence 9998762 89999999999999999999999987777776655 9999999999999999985
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 159 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 159 g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
| .+.++++++.++|++++ ||...+ .|+. ..++++.+++||+||||++|++|+
T Consensus 552 -----------~--------~~~~~v~~~~~~Ga~l~-Gg~~~~---~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~ 603 (715)
T TIGR01092 552 -----------G--------LLDDLIDMLRTEGVTIH-GGPRFA---AYLT-----FNISETKSFRTEYSSLACTVEIVD 603 (715)
T ss_pred -----------h--------hHHHHHHHHHHCCCEEE-CCcchh---heec-----cCCCCchhhhccccCceEEEEEEC
Confidence 0 24567777778899985 775321 2332 125689999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCC----cchHHHHHhhhh
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR----EKGSYSLSNYLQ 314 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~----~~g~~~~~~~~~ 314 (328)
|++|||+++|+++|||++||||+|.+.++++++++++|.||||+++...+..||||+|.||+|+ .+|++++++||+
T Consensus 604 ~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~ 683 (715)
T TIGR01092 604 DVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLT 683 (715)
T ss_pred CHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhce
Confidence 9999999999999999999999999999999999999999999876666788999999999995 479999999999
Q ss_pred ceEEEEe
Q 020284 315 VKAVVTA 321 (328)
Q Consensus 315 ~k~i~~~ 321 (328)
.|++.+.
T Consensus 684 ~k~v~~g 690 (715)
T TIGR01092 684 TRWLLRG 690 (715)
T ss_pred EEEEEEC
Confidence 9998765
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-54 Score=408.82 Aligned_cols=257 Identities=56% Similarity=0.887 Sum_probs=245.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++++.+..|+.|+++|.|.||||+++++.|.
T Consensus 109 ~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~ 188 (367)
T cd06534 109 AAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIM 188 (367)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999997666889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|++|+|++||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+
T Consensus 189 ~~~~~~-~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~f~~~l~----------- 256 (367)
T cd06534 189 KAAAEN-LKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKLV----------- 256 (367)
T ss_pred HHHhcC-CCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHhhc-----------
Confidence 999884 89999999999999999999999999999999999999999999999999999999999886
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
||+.++++++.++++|+|||+++|++|++.+
T Consensus 257 -------------------------------------------------tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~ 287 (367)
T cd06534 257 -------------------------------------------------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEE 287 (367)
T ss_pred -------------------------------------------------eeeeCCCCCCccccCCccCceEEEEecCCHH
Confidence 5666778888999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|+++++|+.++||+++|||+|.+.++++++++++|+|+||+++.. .+.+||||.|.||+|+++|++++++||+.|++.
T Consensus 288 eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 288 EAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 999999999999999999999999999999999999999998776 889999999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-55 Score=416.41 Aligned_cols=269 Identities=18% Similarity=0.190 Sum_probs=246.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHc---CCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA---GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~a---glp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
+++++++||++||+||+|||+.+|.++..++++++++ |+|+++++++++.+.+.++.|+.||++|.|+||||+.+++
T Consensus 116 ~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~ 195 (397)
T cd07077 116 GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVD 195 (397)
T ss_pred HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHH
Confidence 3689999999999999999999999999999999987 9999999999986778889999999999999999999999
Q ss_pred HHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhccc
Q 020284 79 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 158 (328)
Q Consensus 79 ~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~ 158 (328)
.+.+.+. .+|++.|+||++++||++|+|++.|++.+++++|.| ||.|++++++|||++++|+|+++|.+++.+
T Consensus 196 ~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~--- 268 (397)
T cd07077 196 AAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV--- 268 (397)
T ss_pred HHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh---
Confidence 9988662 589999999999999999999999999999999999 999999999999999999999999998763
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 159 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 159 g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
+|++++.||. +.|+.|| +++.+.++|+||||+++++|+
T Consensus 269 -------------------------------~G~~~~~g~~-----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~ 306 (397)
T cd07077 269 -------------------------------EGLKVPQETK-----PLSKETT------PSFDDEALESMTPLECQFRVL 306 (397)
T ss_pred -------------------------------cCcCcCCCce-----eeEEecc------CCCChhhhhhhCceeEEEEEc
Confidence 4667766653 4677776 678888999999999999999
Q ss_pred Chh----HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCC--CCCCccCCC--CCCCCCcch-HHHH
Q 020284 239 DLD----EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFGGYK--QSGQGREKG-SYSL 309 (328)
Q Consensus 239 ~~~----eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~p~gG~~--~SG~g~~~g-~~~~ 309 (328)
|++ +|++++|+++|||+++|||+|.+.++++++++++|.|+||++.... +.+||||.+ .||+|+++| .+++
T Consensus 307 ~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~ 386 (397)
T cd07077 307 DVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGH 386 (397)
T ss_pred chHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCCh
Confidence 996 6667889999999999999999999999999999999999876643 778999999 899999999 9999
Q ss_pred HhhhhceEEE
Q 020284 310 SNYLQVKAVV 319 (328)
Q Consensus 310 ~~~~~~k~i~ 319 (328)
++|++.|+++
T Consensus 387 ~~~~~~k~v~ 396 (397)
T cd07077 387 DALRPLKRLV 396 (397)
T ss_pred HHhcceeEee
Confidence 9999999875
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-55 Score=412.87 Aligned_cols=272 Identities=18% Similarity=0.175 Sum_probs=234.3
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCc-hhHHHHhhhcCCcCeEEEeCCHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTT 76 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~----l~~aglp~g~v~~v~~~~-~~~~~~l~~~~~v~~v~ftGs~~~ 76 (328)
++++++|||++||+||+|||+.+|.++..++++ |.++|+|+|++|+|++.+ .+.++.|..||++|+|+||||+.+
T Consensus 118 ~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~v 197 (398)
T TIGR00407 118 TVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGL 197 (398)
T ss_pred HHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHH
Confidence 568999999999999999999999999999999 559999999999999744 457888999999999999999999
Q ss_pred HHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 77 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 77 ~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
++.+++. ..+|+++|+|||||+||++|||++.|++.+++++|. +||.|++++++|||++++|+|+++|.++++++
T Consensus 198 g~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~-~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~ 272 (398)
T TIGR00407 198 VRLIKQT----STIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQ-RPSTCNAIETLLVNKAIAREFLPVLENQLLEK 272 (398)
T ss_pred HHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcC-CCCcccccceEEEeHHHHHHHHHHHHHHHHhc
Confidence 9988764 368999999999999999999999999999999996 49999999999999999999999999999876
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
++. ++. .+.+++++.. | .||++ ..++.+++||+||||++|++
T Consensus 273 ~~~--------~~~------~~~i~~~v~~-----------g----------~~tv~---~~~~~i~~eE~FgPvl~v~~ 314 (398)
T TIGR00407 273 GVT--------IHA------DAYALKLLEL-----------G----------PATEA---IVCKTDFDKEFLSLDLSVKI 314 (398)
T ss_pred CCE--------Eec------CHHHHHHHhc-----------c----------Ccccc---ccccccccchhhCceeEEEE
Confidence 431 211 1334444321 1 13443 23368899999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCC----CCCCCcchHHHHHhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ----SGQGREKGSYSLSNY 312 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~----SG~g~~~g~~~~~~~ 312 (328)
|+|++||++++|+++|||+++|||+|.++++++++++++|.|+||+++...+..|||=-.. ++..+.+|+.+++.|
T Consensus 315 ~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~ 394 (398)
T TIGR00407 315 VESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEAL 394 (398)
T ss_pred ECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHh
Confidence 9999999999999999999999999999999999999999999999887777889973222 245677899999999
Q ss_pred hhce
Q 020284 313 LQVK 316 (328)
Q Consensus 313 ~~~k 316 (328)
|..|
T Consensus 395 ~~~~ 398 (398)
T TIGR00407 395 TSYK 398 (398)
T ss_pred cCCC
Confidence 9865
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-54 Score=400.27 Aligned_cols=316 Identities=33% Similarity=0.488 Sum_probs=288.3
Q ss_pred CchhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 1 ~~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
|+..+++.||++||+|+-||.+++|+.+..-++++.++|+|++++|+++|+++.++..|+.+++++.|+||||+.+++.|
T Consensus 252 IFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li 331 (769)
T COG4230 252 IFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLI 331 (769)
T ss_pred HHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHH
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCC--CCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhccc
Q 020284 81 LQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 158 (328)
Q Consensus 81 ~~~~a~~~--~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~ 158 (328)
.++.++++ ..|++.|.||.|.|||+.+|--+.++..++.|+|-.+||+|.+.+.+++++++.|..++.|+..+.++++
T Consensus 332 ~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~ 411 (769)
T COG4230 332 QRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRV 411 (769)
T ss_pred HHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhcc
Confidence 99877743 5789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 159 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 159 g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
|+|..-.+++||+|+......++++|+..+..|-.+..-....+ ..|.|+.||+++-..-+ -++.|+||||+.|++|
T Consensus 412 G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~--eL~rEVFGPVLHVvRy 489 (769)
T COG4230 412 GNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLD--ELQREVFGPVLHVVRY 489 (769)
T ss_pred CCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHH--HHHHHhccceeEEEEe
Confidence 99999999999999999999999999999888755543222122 47999999999744333 3588999999999999
Q ss_pred c--ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhh
Q 020284 238 K--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNY 312 (328)
Q Consensus 238 ~--~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~~~~~~~ 312 (328)
+ ++++.|+-+|.++|||+.+|||+-++.+.++.+++.+|++|||+.... ...+||||.+.||+| ..+|+..+..|
T Consensus 490 ~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl 569 (769)
T COG4230 490 KRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRL 569 (769)
T ss_pred cHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHH
Confidence 7 789999999999999999999999999999999999999999996553 467999999999999 66799999999
Q ss_pred hhceEE
Q 020284 313 LQVKAV 318 (328)
Q Consensus 313 ~~~k~i 318 (328)
...+..
T Consensus 570 ~~~~p~ 575 (769)
T COG4230 570 VSERPW 575 (769)
T ss_pred HhcCCc
Confidence 976654
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-52 Score=377.42 Aligned_cols=281 Identities=42% Similarity=0.769 Sum_probs=273.3
Q ss_pred CCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHH
Q 020284 41 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120 (328)
Q Consensus 41 p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~ 120 (328)
-.|++|+++|++.-.++.|..||+++.|-||||+..|..|++.|+.++.|++.+|+||++|+|++.|||+++|+..-..+
T Consensus 598 ~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~ 677 (881)
T KOG2452|consen 598 LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSS 677 (881)
T ss_pred hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccc
Confidence 35899999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred HHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcc
Q 020284 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 200 (328)
Q Consensus 121 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~ 200 (328)
.|++-|..|.+..|+||.+++.|+|+.++.+.+++.++|+|+|.+++-||--..+|..++.+|.+.++..|+++.+||.+
T Consensus 678 vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~ 757 (881)
T KOG2452|consen 678 VFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQ 757 (881)
T ss_pred eeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceecceeeecCCCCCcccCcceecceEEeEeec--ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEE
Q 020284 201 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 278 (328)
Q Consensus 201 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v 278 (328)
.+..|.|++|||+.+++.++.+..||-||||+.+.+|+ |+++.++.+|.+++||+++|||+|.....++++.+.+|+|
T Consensus 758 ~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtv 837 (881)
T KOG2452|consen 758 VPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTV 837 (881)
T ss_pred CCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceE
Confidence 99999999999999999999999999999999999998 5889999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 279 WINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 279 ~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
+||++...+...||||+|+||+|...|...+.+|.+.|+|.+.
T Consensus 838 fvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~e 880 (881)
T KOG2452|consen 838 FVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFE 880 (881)
T ss_pred EEeeccccccccCCCCccccccccchhHHHHhhheeeEEEEee
Confidence 9999988889999999999999999999999999999999764
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-51 Score=355.29 Aligned_cols=318 Identities=31% Similarity=0.518 Sum_probs=295.2
Q ss_pred hhhHHHHhcCCeEEEeCCCCChHHHHH----HHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHH
Q 020284 4 WKVGPALACGNTIVLKTAEQTPLSALY----VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 79 (328)
Q Consensus 4 ~~~~~ALaaGn~vVlkps~~~~~t~~~----l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 79 (328)
|.-+.||.+||+|+|||.|.+|+++.. +.+.|.+-.+|.+..+...| ..+.++++..+.++..+.||||+..++.
T Consensus 172 wnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKs 250 (507)
T KOG2453|consen 172 WNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKS 250 (507)
T ss_pred cCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhH
Confidence 344678999999999999999988765 45556666899999999988 7888999999999999999999999999
Q ss_pred HHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccC
Q 020284 80 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 159 (328)
Q Consensus 80 v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g 159 (328)
+.+....+ .-+..+|+||+|+.||.+|||+..++...++++...+||+|+..+|+++|+++||+.+++|+....++++|
T Consensus 251 vgq~vqar-fgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ig 329 (507)
T KOG2453|consen 251 VGQQVQAR-FGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIG 329 (507)
T ss_pred HHHHHHHH-hhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecC
Confidence 99988775 77899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
.|+|+.+-+||+-+.+...+.+..++++++.|.++.+||+..+.+|+|++|||++ ...|.++..+|.|.||+.|..|.+
T Consensus 330 npld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~ 408 (507)
T KOG2453|consen 330 NPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFST 408 (507)
T ss_pred CcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccc
Confidence 9999999999999999999999999999999999999999888899999999998 889999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHh--cceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA--LRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~--l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
++||+++-|..+.||+.||||+|...+-+...- -++|.|.||-+... ...-.|||-|.+|.|++.|.++-++|+++.
T Consensus 409 ~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrs 488 (507)
T KOG2453|consen 409 LEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRS 488 (507)
T ss_pred hhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhc
Confidence 999999999999999999999999999888754 47999999987653 467899999999999999999999999999
Q ss_pred EEEEeCCC
Q 020284 317 AVVTALKN 324 (328)
Q Consensus 317 ~i~~~~~~ 324 (328)
+..+++.+
T Consensus 489 tctinysk 496 (507)
T KOG2453|consen 489 TCTINYSK 496 (507)
T ss_pred eeeeeccc
Confidence 98888754
|
|
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=234.24 Aligned_cols=269 Identities=20% Similarity=0.258 Sum_probs=223.5
Q ss_pred hhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHH-HHhhhcCCcCeEEEeCCHHHHHH
Q 020284 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAG-AALASHMEVDKLAFTGSTTTGKI 79 (328)
Q Consensus 5 ~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~~~~-~~l~~~~~v~~v~ftGs~~~~~~ 79 (328)
..+-||++||+||||.+..+..+...|.++++ ++|+|++.||+++..+.+.. +.|..+..+|.|+..||....+.
T Consensus 132 aaaLclKsGNAvILRGGsea~~Sn~ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~ 211 (417)
T COG0014 132 AAALCLKSGNAVILRGGSEAIHSNAAIVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRR 211 (417)
T ss_pred HHHHHHhcCCEEEEeCcHHHhhhHHHHHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHH
Confidence 35678999999999999999999988877655 56999999999998655544 45555777999999999999998
Q ss_pred HHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccC
Q 020284 80 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 159 (328)
Q Consensus 80 v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g 159 (328)
|.+.+ ..||+-.+-|+|.++|+.+||+|.|.+-++.+++...+ .|++.+.++||+.+.++|+..|.+.+.
T Consensus 212 v~~~a----~vPVi~~~~G~CHiyvd~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~----- 281 (417)
T COG0014 212 VVENA----TVPVIEHGVGNCHIYVDESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQ----- 281 (417)
T ss_pred HHhCC----cCCEEecCcceEEEEecccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHH-----
Confidence 87764 68999999999999999999999999999999999988 999999999999999999999988776
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeec--CCCCCcccCcceecceEEeEee
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG--VKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~--~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
..|.++....+... ++.+ .+....-|..|...+++.|..+
T Consensus 282 -----------------------------~~gvelr~d~~~~~---------~~~~~~~~A~e~Dw~tEyLd~ilavkvV 323 (417)
T COG0014 282 -----------------------------EAGVELRGDAEALA---------LLPDAVKPATEEDWDTEYLDLILAVKVV 323 (417)
T ss_pred -----------------------------hcCeEEEcCHHHHH---------hccccCCCCchhhHHHHhhhheeEEEEe
Confidence 23444443222110 1111 2222233678999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccC---CCCC-CCCCcchHHHHHhhh
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGG---YKQS-GQGREKGSYSLSNYL 313 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG---~~~S-G~g~~~g~~~~~~~~ 313 (328)
++.+|||+++|+.+.+|+-+|.|+|.+.+++|.+.+++..||||.++.+....-||- .+.| ...+.+|+-|++++|
T Consensus 324 d~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LT 403 (417)
T COG0014 324 DSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALT 403 (417)
T ss_pred CCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhc
Confidence 999999999999999999999999999999999999999999999998877766753 3333 356888999999999
Q ss_pred hceEEEEe
Q 020284 314 QVKAVVTA 321 (328)
Q Consensus 314 ~~k~i~~~ 321 (328)
..|+++..
T Consensus 404 s~Kyiv~G 411 (417)
T COG0014 404 SYKYIVRG 411 (417)
T ss_pred ceeEEEeC
Confidence 99998643
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=220.73 Aligned_cols=250 Identities=18% Similarity=0.176 Sum_probs=186.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCC----CcEEEE--eCCchhHHHHhhhcCCcCeEEEeCCHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP----GVLNIV--SGYGPTAGAALASHMEVDKLAFTGSTT 75 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~----g~v~~v--~~~~~~~~~~l~~~~~v~~v~ftGs~~ 75 (328)
.++.+++||++||++|+|||+.+|.++..|.++|.++ +|+ +.++++ +|.+++.++.|.+++ |.|+||||++
T Consensus 128 ~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~ 204 (422)
T cd07080 128 PVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEE 204 (422)
T ss_pred HHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHH
Confidence 5788999999999999999999999999999999999 787 888888 454556888899887 9999999999
Q ss_pred HHHHHHHHHhhCCCCcceeccCCC-CceecCCCC----CHHHHHHHHHHHHHhhcCCCccCCCeeEEcccc---hHHHHH
Q 020284 76 TGKIVLQLAAKSNLKPVTLELGGK-SPFIVCEDA----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV---YDQFVE 147 (328)
Q Consensus 76 ~~~~v~~~~a~~~~~~~~~e~gG~-~~~iV~~da----d~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~---~~~f~~ 147 (328)
+++.|++.++. + +.++|+||| +++|+++++ |++.+++.++++++.++||.|.+++++||++++ +++|.+
T Consensus 205 ~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~ 281 (422)
T cd07080 205 AVKAIRSLLPP-G--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAE 281 (422)
T ss_pred HHHHHHHhCCC-C--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHH
Confidence 99999998875 2 468999999 556666668 999999999999999999999999999999999 899999
Q ss_pred HHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcce
Q 020284 148 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEI 227 (328)
Q Consensus 148 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 227 (328)
+|.++++++.-.-|... + +.....++...-..+...+......+ ..+ -+|+...... +.. ..
T Consensus 282 ~l~~~l~~~~~~~p~~~------~-~~~~~~~~~~~r~~~~~~~~~~~~~~----~~~----~~v~~~~~~~--~~~-~~ 343 (422)
T cd07080 282 ALAAALERLPRRYPALS------L-SAAESAKIARARLEAEFYELKGGVSR----DLG----WTVIISDEIG--LEA-SP 343 (422)
T ss_pred HHHHHHHHHHHhCCCCC------C-CHHHHHHHHHHHHHHHHHHHhcCCCC----CCC----eEEEEeCCCC--ccC-CC
Confidence 99999998654333211 1 33334443333222222221111101 111 1233322221 111 33
Q ss_pred ecceEEeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEE
Q 020284 228 FGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSV 278 (328)
Q Consensus 228 fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~-~g~v 278 (328)
.+=.+.|+++++++|++..++. +--|++++..+.+. .++++++. .|.-
T Consensus 344 ~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~~Gv~ 392 (422)
T cd07080 344 LNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAAAGVD 392 (422)
T ss_pred CcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHHcCcc
Confidence 4458889999999999999986 55699999988877 77777775 4533
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.8e-23 Score=179.90 Aligned_cols=266 Identities=20% Similarity=0.234 Sum_probs=218.7
Q ss_pred hHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 6 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 6 ~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~a----glp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.+-|+++||.++||..-.+..+...|.++.+++ |.|.+.+++|.. .+++.+.|..+..||.|+..||....+.|.
T Consensus 130 asLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik 208 (433)
T KOG4165|consen 130 ASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIK 208 (433)
T ss_pred HHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHh
Confidence 356889999999999999999999988887776 779999999998 577888888888899999999999999887
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccc-hHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~l~~~~~~~~~g~ 160 (328)
+.. .+||..+-.|-+.++|++|||+++|.+-+..+++-+.. .|++.+.+++|++. ...|++.|...++
T Consensus 209 ~~t----kIPVLGHA~GichvYvd~dad~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~------ 277 (433)
T KOG4165|consen 209 DTT----KIPVLGHAEGICHVYVDKDADLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLK------ 277 (433)
T ss_pred hcc----cCcccccccceeEEEeccccCHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHH------
Confidence 653 68999999999999999999999999888888876655 99999999999984 4456666655443
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
++|.++.+|-.. .. ++.-.++...-++.|.-.-.+++-.+++.
T Consensus 278 ----------------------------~~gVtl~agpkl-~~--------~l~~~p~e~~s~~~Ey~~l~~~ievV~~v 320 (433)
T KOG4165|consen 278 ----------------------------EEGVTLHAGPKL-AA--------LLKFSPPEAKSFNTEYGSLECTIEVVDSV 320 (433)
T ss_pred ----------------------------hcCeEEecChhH-Hh--------hcCcCCchhhhhhhhhcchheeeeecccH
Confidence 446666554431 11 11111344455778888889999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhce
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVK 316 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g----~~~g~~~~~~~~~~k 316 (328)
++||+.+|..+.+++-+|.|+|.+.+++|.+.+++..|+.|.+..+...+-||=.-.-|+. +.+||-|++-.+.+|
T Consensus 321 ~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttk 400 (433)
T KOG4165|consen 321 QSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTK 400 (433)
T ss_pred HHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeee
Confidence 9999999999999999999999999999999999999999999998888888644444543 556999999999999
Q ss_pred EEEE
Q 020284 317 AVVT 320 (328)
Q Consensus 317 ~i~~ 320 (328)
+++.
T Consensus 401 w~lR 404 (433)
T KOG4165|consen 401 WLLR 404 (433)
T ss_pred eEEe
Confidence 8753
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.57 E-value=5e-12 Score=119.65 Aligned_cols=281 Identities=17% Similarity=0.182 Sum_probs=182.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCC----CcEEEE--eCCchhHHHHhhhcCCcCeEEEeCCHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP----GVLNIV--SGYGPTAGAALASHMEVDKLAFTGSTT 75 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~----g~v~~v--~~~~~~~~~~l~~~~~v~~v~ftGs~~ 75 (328)
.++.++-+|.+||..|+|+|...+.+...|.+.|.+. .|. ..+.++ ++.+.++.+.+.++ .|.++..||..
T Consensus 103 ~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d~~~~~~~~~~--~D~vv~wGgd~ 179 (399)
T PF05893_consen 103 GFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGDEELEEALSQQ--ADAVVAWGGDE 179 (399)
T ss_pred HHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCchHHHHHHHHH--CCEEEEeCCHH
Confidence 4567889999999999999999999999999999887 554 445666 44456666767644 89999999999
Q ss_pred HHHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEccc---chHHHHHHHHHH
Q 020284 76 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---VYDQFVEKANAL 152 (328)
Q Consensus 76 ~~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~---~~~~f~~~l~~~ 152 (328)
+.+.+.+.... .++.+....-.+-.++..+++++.+++.+..=.+...+|.|.|++.+||..+ -.++|.++|.++
T Consensus 180 ti~~ir~~~~~--~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~ifv~~g~~~~~~~f~~~L~~~ 257 (399)
T PF05893_consen 180 TIRAIRQPLPP--GARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVIFVETGDGDSVEEFAERLAEA 257 (399)
T ss_pred HHHHHHHHcCC--CCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEEEEECCCcccHHHHHHHHHHH
Confidence 99999984432 3445555556667888888899999999999999999999999999999933 357888888777
Q ss_pred HhhcccCCCCCCCccccccCCHHHHHHHHHH-----HHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcce
Q 020284 153 AMKRVVGDPFKGGIQQGPQIDSEQFEKILKY-----IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEI 227 (328)
Q Consensus 153 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~-----l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 227 (328)
+.+..---|... .+......+... ++.+...+.++. ++.. + .-||+....+ . .....
T Consensus 258 L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~----~---~~~V~~~~~~--~-~~~~p 319 (399)
T PF05893_consen 258 LERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVW-SSDD----N---SWTVIVSPEP--P-LLPSP 319 (399)
T ss_pred HHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCccee-ecCC----C---CEEEEECCCc--c-cccCC
Confidence 765322111111 112222222222 223444343444 2221 1 2234433221 1 12233
Q ss_pred ecceEEeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCCCCCCCCCCccCCCCCCCCCcchH
Q 020284 228 FGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 306 (328)
Q Consensus 228 fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~ 306 (328)
.+=.+.|+++++.+|++..++....=-|++++... +...++++.+ ..|.-.|=.... ...+. .| +...|.
T Consensus 320 l~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Riv~~G~--m~~~~-----~g-~~hDG~ 390 (399)
T PF05893_consen 320 LNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRIVPLGQ--MLDFD-----PG-WPHDGM 390 (399)
T ss_pred CCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeeeCCCCc--CCCCC-----CC-CCcCCH
Confidence 45588999999999999999887541388887644 5566666644 466444422211 11111 11 244577
Q ss_pred HHHHhhhh
Q 020284 307 YSLSNYLQ 314 (328)
Q Consensus 307 ~~~~~~~~ 314 (328)
+.|.+|++
T Consensus 391 ~~L~~lvR 398 (399)
T PF05893_consen 391 YPLRRLVR 398 (399)
T ss_pred hHHHHHhC
Confidence 77777764
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.9e-15 Score=113.38 Aligned_cols=145 Identities=27% Similarity=0.303 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHh-CCCeEeeCCcccCCCCceecceeeecCCCCCc
Q 020284 143 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDML 221 (328)
Q Consensus 143 ~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 221 (328)
....+.|++..+.+++.+...+.++. .+..+|+.++++.-.- .|..+..-|. +.|+|+.||++. +.|+|.
T Consensus 9 ksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~ms 79 (157)
T KOG2449|consen 9 KSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNMS 79 (157)
T ss_pred hhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCcc
Confidence 45567777888889988888888887 6677888888875211 1222322222 468999999998 999999
Q ss_pred ccCcceecceEEeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCC-CCCCCCCCccCCC
Q 020284 222 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYK 296 (328)
Q Consensus 222 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~-~~~~~~~p~gG~~ 296 (328)
++.||+||||+....-++++|+|.++|+.+||-...+||.+-+.++++....++|.+.+|.+ |...+...|.|-+
T Consensus 80 ~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 80 CYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR 155 (157)
T ss_pred eeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence 99999999999999999999999999999999999999999999999999999999999985 5555676776644
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.9e-13 Score=113.38 Aligned_cols=174 Identities=19% Similarity=0.236 Sum_probs=131.3
Q ss_pred CceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHH
Q 020284 100 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179 (328)
Q Consensus 100 ~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~ 179 (328)
+-+||++|.|++.|+..++.++-.--+ ..+...|+||++++|+|+++++.+++. +++....- ..+.|
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~p------l~~~va~H-----pny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKP------LSPQVANH-----PNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCcc------CChhhccC-----cHHHH
Confidence 348999999999999999999854444 567788999999999999999998874 34433332 33566
Q ss_pred HHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChhHHHHHhhcCCCC-ceEEE
Q 020284 180 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG-LAAGV 258 (328)
Q Consensus 180 ~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g-l~~~v 258 (328)
..+.++ .-+++.+.+.... ....-.|.++.+.+.+. +. +-..+|+++++|++..||+++.++.... -++||
T Consensus 73 sl~~i~---~l~~~~I~~~~~~--~~~~aSPilV~d~~h~~--fg-~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~SVsi 144 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFEN--VPPPASPILVCDFTHSY--FG-DGPTGVITLHTFRTPKEAIELCAKETLPFDSVSI 144 (215)
T ss_pred HHHHHH---hcCCeEEEecccC--CCCCCCCEEEcCCCHHH--cC-CCCCeEEEEEccCCHHHHHHHHhcCCCCcceEEE
Confidence 555555 4578888874422 12234799998777543 23 2455799999999999999999986332 39999
Q ss_pred ecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccC
Q 020284 259 FTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGG 294 (328)
Q Consensus 259 ~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG 294 (328)
|++..+.+.+++.++++..+||||... ..|-.++-.
T Consensus 145 W~ekla~~Yel~~~l~~~~f~iNC~~V~L~PI~~~~~ 181 (215)
T PF07368_consen 145 WNEKLASAYELAARLPCDTFYINCFNVDLSPIMPFFA 181 (215)
T ss_pred eCcHHHHHHHHHHhCCCCEEEEEeccCCchhhhhhhh
Confidence 999999999999999999999999765 345555433
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00079 Score=72.25 Aligned_cols=82 Identities=18% Similarity=0.168 Sum_probs=61.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++.+++.||++||.||+||++.++. .++ .+|..+.+.+. .+..+..+++++.|.|+|++.+.+.+.
T Consensus 1092 ~l~Qi~AALaaGn~vi~~~~~~~~~-------~~~--~Lp~~~~~~~~-----~~~~~~~~~~i~~V~~~G~~~~a~~i~ 1157 (1208)
T PRK11905 1092 LLRQLAAALATGNVAVVAADSGLAA-------ALA--DLPGLVAARID-----WTQDWEADDPFAGALLEGDAERARAVR 1157 (1208)
T ss_pred HHHHHHHHHHhCCEEEEeCCcccHH-------HHH--hCccccccccc-----cccccccCCcccEEEEeCCHHHHHHHH
Confidence 4679999999999999999988662 222 25665555552 234677788899999999999999999
Q ss_pred HHHhhCC--CCcceeccC
Q 020284 82 QLAAKSN--LKPVTLELG 97 (328)
Q Consensus 82 ~~~a~~~--~~~~~~e~g 97 (328)
+..+++. +.|++.|..
T Consensus 1158 ~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1158 QALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred HHHHhCCCCcceEEecCC
Confidence 9888764 355555554
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=95.83 E-value=1.4 Score=41.83 Aligned_cols=234 Identities=18% Similarity=0.159 Sum_probs=101.3
Q ss_pred hhHHHHhcCCeEE--EeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhh----cCCcCeEEEeCCHHHHH
Q 020284 5 KVGPALACGNTIV--LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS----HMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 5 ~~~~ALaaGn~vV--lkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~----~~~v~~v~ftGs~~~~~ 78 (328)
.++||-.+|..=| .-|+...-.....+.-+...+|..+ +..-.|.....+|.- -|.+|+|+=-|..=+..
T Consensus 128 ~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e----vy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~ 203 (412)
T PF00815_consen 128 TAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE----VYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTA 203 (412)
T ss_dssp HHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE----EEE--HHHHHHHHHH--SSS---SEEE---SHHHHH
T ss_pred cccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE----EEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHH
Confidence 4577888876533 4444443334445555666666642 222224333344443 36788887666655433
Q ss_pred HHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhccc
Q 020284 79 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 158 (328)
Q Consensus 79 ~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~ 158 (328)
+=....+.- .+ =.+.+...-.+|-++++|.+..+..++..+=+... .+.++|-.+ +++.+++.+.+.+.--
T Consensus 204 AK~~v~g~V-~I-D~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~-----a~~vLvt~s--~~la~~V~~~v~~~l~ 274 (412)
T PF00815_consen 204 AKRLVFGDV-GI-DMIAGPSEVLVIADETANPEFVAADLLAQAEHDPD-----AQAVLVTTS--EELAEAVEAEVERQLE 274 (412)
T ss_dssp HHHHHHHS--EE-S------EEEEEE-TTS-HHHHHHHHHHHHTT-TT------EEEEEES---HHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCc-cc-CCCCCCCceEEEECCCCCHHHHHHHHHHHhccCCC-----CceEEEECC--HHHHHHHHHHHHHHHH
Confidence 211111110 00 01122222335556778888888888766544433 233555444 3444444443332100
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 159 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 159 g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
. +.. . +.++++++ +| .++.++
T Consensus 275 ~-----------l~r---~----~i~~~sl~--------------------------------------~g---~ii~~~ 295 (412)
T PF00815_consen 275 E-----------LPR---R----EIAEKSLE--------------------------------------NG---AIIVVD 295 (412)
T ss_dssp T------------TT---H----HHHHHHHT--------------------------------------T----EEEE-S
T ss_pred h-----------CCc---h----HHHHHHHH--------------------------------------CC---eEEEEC
Confidence 0 000 0 11111111 11 456779
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcCCCC---------CCCCCCccCCCCCCCCCcchHHH
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWINCFDV---------FDAAIPFGGYKQSGQGREKGSYS 308 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~-~g~v~iN~~~~---------~~~~~p~gG~~~SG~g~~~g~~~ 308 (328)
|++||++++|..-.- -+.|.++|. +++..+++ +|.|++..+.. .+.-+|-+ |..++.|..+
T Consensus 296 ~l~ea~~~~N~~APE-HLel~~~~~---~~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLs 366 (412)
T PF00815_consen 296 SLEEAIELANEYAPE-HLELQVEDP---EELLEKIRNAGAIFLGEYTPEALGDYAAGPNHVLPTG-----GTARFSSGLS 366 (412)
T ss_dssp SHHHHHHHHHHH--S-EEEEESTTH---HHHGGG--S-SEEEESTT--HHHHHHTSSS------T-----TGGGT---S-
T ss_pred CHHHHHHHHHHhhHH-HHHHHHcCH---HHHHHHhhccChhhcCCCCCHHHhhhccCCCccCCCC-----ccccccCCCc
Confidence 999999999995432 467888886 45667774 89999997643 13446664 4667778888
Q ss_pred HHhhhhceEEE
Q 020284 309 LSNYLQVKAVV 319 (328)
Q Consensus 309 ~~~~~~~k~i~ 319 (328)
...|.++-++.
T Consensus 367 v~~FlK~~s~~ 377 (412)
T PF00815_consen 367 VDDFLKRISVQ 377 (412)
T ss_dssp GGGGEEEEEEE
T ss_pred HHHccceeeEE
Confidence 88898865543
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.48 E-value=2.4 Score=40.48 Aligned_cols=78 Identities=23% Similarity=0.394 Sum_probs=54.8
Q ss_pred EeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCCCCC---------CCCCCccCCCCCCCCC
Q 020284 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF---------DAAIPFGGYKQSGQGR 302 (328)
Q Consensus 233 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~---------~~~~p~gG~~~SG~g~ 302 (328)
.++.++|++||++++|..-.- -+.|.++|. +.+..++ ++|.|++..+... +.-+|- +|..+
T Consensus 304 ~iivv~~leeai~~~N~~APE-HLel~~~~p---~~~l~~I~nAGaiFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR 374 (425)
T PRK00877 304 AIILVDDLEEAIELSNAYAPE-HLEIQTEDP---RALLDRIRNAGAIFLGPYTPESLGDYAAGPNHVLPT-----SGTAR 374 (425)
T ss_pred EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCccceeccCCCCchhhhhcccCCCcccCC-----Cccee
Confidence 346779999999999996432 356888887 4455666 4999999875431 223444 56778
Q ss_pred cchHHHHHhhhhceEEE
Q 020284 303 EKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 303 ~~g~~~~~~~~~~k~i~ 319 (328)
+.+..+...|.++-++.
T Consensus 375 ~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 375 FSSGLSVYDFLKRSSVI 391 (425)
T ss_pred ecCCccHHHhccceeEE
Confidence 88888999998865543
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=3.3 Score=39.40 Aligned_cols=78 Identities=18% Similarity=0.318 Sum_probs=54.3
Q ss_pred EeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcCCCCC---------CCCCCccCCCCCCCCC
Q 020284 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWINCFDVF---------DAAIPFGGYKQSGQGR 302 (328)
Q Consensus 233 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~-~g~v~iN~~~~~---------~~~~p~gG~~~SG~g~ 302 (328)
.++.++|++||++++|..-.- -+-|.++|. +.+..+++ +|.|++..+... +.-+|- +|..+
T Consensus 294 ~ii~v~~~eeai~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR 364 (416)
T PRK13770 294 YLIHASNFDEACHVMNTIAPE-HASIQTVNP---QPYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLPT-----NRTAR 364 (416)
T ss_pred EEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhCCEeceeccCCCCchhhhccccCCCCcCCC-----Cccee
Confidence 346679999999999996432 245888886 45666665 899999875431 223444 45667
Q ss_pred cchHHHHHhhhhceEEE
Q 020284 303 EKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 303 ~~g~~~~~~~~~~k~i~ 319 (328)
+.+..++..|.++-++.
T Consensus 365 ~~sgLsv~~FlK~~s~~ 381 (416)
T PRK13770 365 FTNGLSVNDFLTRNTVI 381 (416)
T ss_pred ccCCCcHHHeecceeeE
Confidence 77777888888865543
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.57 E-value=1.9 Score=40.86 Aligned_cols=230 Identities=21% Similarity=0.262 Sum_probs=120.2
Q ss_pred hhHHHHhcCCe--EEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhc----CCcCeEEEeCCHHHHH
Q 020284 5 KVGPALACGNT--IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH----MEVDKLAFTGSTTTGK 78 (328)
Q Consensus 5 ~~~~ALaaGn~--vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~----~~v~~v~ftGs~~~~~ 78 (328)
..+||-.+|+. |+.-|.+..- .+..+.-+.+.+|+.+ +++ + | |.....+|... |.+|+|+=-|+.-+..
T Consensus 138 ~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy~-v-G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVta 212 (425)
T COG0141 138 NAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VYK-V-G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTA 212 (425)
T ss_pred hhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HHH-c-c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHH
Confidence 45788888875 3444555433 3344444445555432 111 1 2 44444556544 7789888777665533
Q ss_pred HHHHHHhhCCCCccee-ccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 79 IVLQLAAKSNLKPVTL-ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 79 ~v~~~~a~~~~~~~~~-e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+=..-. +..-+=+ .+...--+|-++++|.+..+..++..+=+... .+.++|-.+ ++|.+++.+++.+..
T Consensus 213 AKr~v~---g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd~~-----a~aiLvT~s--~~la~~v~~~v~~~l 282 (425)
T COG0141 213 AKRLVS---GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEHDPD-----AQAILVTDS--EELAEAVEAAVERQL 282 (425)
T ss_pred HHHHhh---CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcCCC-----ceEEEEeCc--HHHHHHHHHHHHHHH
Confidence 111111 1111111 11122234455669999988888766544322 344555443 344444444433210
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
- . ..| .+.+.+++. -+| .|+-.
T Consensus 283 ~--------~---------l~~-~ei~~~~l~-------------------------------------~~g---~iilv 304 (425)
T COG0141 283 E--------T---------LPR-AEIARKALE-------------------------------------NYG---AIILV 304 (425)
T ss_pred H--------h---------ccH-HHHHHHHHH-------------------------------------hCC---eEEEE
Confidence 0 0 000 111111110 111 45667
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCCCCC---------CCCCCccCCCCCCCCCcchHH
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF---------DAAIPFGGYKQSGQGREKGSY 307 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~---------~~~~p~gG~~~SG~g~~~g~~ 307 (328)
+|++|+++++|..-.- -+-|.++|+. .++.++ ++|.|+++.+... +.-+|- +|.-+..+..
T Consensus 305 ~~l~ea~~~~N~~APE-HLei~~~~p~---~~l~~I~nAGsIFlG~~sPe~~GDY~aG~NHVLPT-----~g~AR~~s~L 375 (425)
T COG0141 305 DDLDEAVEISNEYAPE-HLELQTENPR---ELLGKIRNAGSIFLGHYSPESLGDYAAGPNHVLPT-----SGTARFSSGL 375 (425)
T ss_pred CCHHHHHHHHHhhChH-hhhhhhcCHH---HHHHHhcccceeeecCCCCccccccccCCCccCCC-----CccchhcCCc
Confidence 9999999999996432 3568888764 455666 4899999986432 233444 4555666777
Q ss_pred HHHhhhhce
Q 020284 308 SLSNYLQVK 316 (328)
Q Consensus 308 ~~~~~~~~k 316 (328)
++..|.++-
T Consensus 376 ~v~dF~K~~ 384 (425)
T COG0141 376 SVYDFLKRS 384 (425)
T ss_pred cHHHhhhHH
Confidence 777777643
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.56 E-value=4.3 Score=38.40 Aligned_cols=78 Identities=23% Similarity=0.337 Sum_probs=54.5
Q ss_pred EeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCCCCC---------CCCCCccCCCCCCCCC
Q 020284 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF---------DAAIPFGGYKQSGQGR 302 (328)
Q Consensus 233 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~---------~~~~p~gG~~~SG~g~ 302 (328)
.++.++|++||++++|..-.- -+-|.++|. +++..++ ++|.|++..+... +.-+|- +|..+
T Consensus 273 ~ii~v~~l~ea~~~~N~~APE-HLel~~~~p---~~~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT-----~G~Ar 343 (393)
T TIGR00069 273 AIILVDDLEEAIEISNDYAPE-HLELQTKNP---EELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPT-----GGTAR 343 (393)
T ss_pred EEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhcCccceeccCCCCchhhhhccCCCCcccCC-----Cccee
Confidence 345679999999999996432 245788776 4556666 4899999875431 223444 45678
Q ss_pred cchHHHHHhhhhceEEE
Q 020284 303 EKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 303 ~~g~~~~~~~~~~k~i~ 319 (328)
+.+..+...|.++-++.
T Consensus 344 ~~sgL~v~~F~K~~s~~ 360 (393)
T TIGR00069 344 FYSGLSVLDFLKRITVQ 360 (393)
T ss_pred ecCCccHHHhccceeEE
Confidence 88888889998865543
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.47 E-value=4.7 Score=38.54 Aligned_cols=77 Identities=16% Similarity=0.335 Sum_probs=54.3
Q ss_pred EeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcCCCCC---------CCCCCccCCCCCCCCC
Q 020284 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWINCFDVF---------DAAIPFGGYKQSGQGR 302 (328)
Q Consensus 233 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~-~g~v~iN~~~~~---------~~~~p~gG~~~SG~g~ 302 (328)
.++.++|++||++++|..-.- -+.|.++|. +.+..+++ +|.|++..+... +.-+|- +|..+
T Consensus 299 ~ii~v~~l~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~Ar 369 (426)
T PRK12447 299 EVILCDDLEEMVAEADRYASE-HVQVMTEDP---DWFLENMTNYGALFLGERTNVAYGDKVIGTNHVLPT-----SGAAR 369 (426)
T ss_pred EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCccceeccCCCCchhhhhcccCCCcccCC-----Cccee
Confidence 345679999999999996432 356888887 45666664 899999765431 223444 55778
Q ss_pred cchHHHHHhhhhceEE
Q 020284 303 EKGSYSLSNYLQVKAV 318 (328)
Q Consensus 303 ~~g~~~~~~~~~~k~i 318 (328)
+.+..+.++|.++-++
T Consensus 370 ~~sgLsv~~FlK~~s~ 385 (426)
T PRK12447 370 YTGGLWVGKFLKTVTY 385 (426)
T ss_pred ecCCCcHHHhccceeE
Confidence 8888888999886554
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=91.58 E-value=13 Score=35.62 Aligned_cols=78 Identities=23% Similarity=0.289 Sum_probs=54.4
Q ss_pred EeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCCCCC---------CCCCCccCCCCCCCCC
Q 020284 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF---------DAAIPFGGYKQSGQGR 302 (328)
Q Consensus 233 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~---------~~~~p~gG~~~SG~g~ 302 (328)
.++.++|++||++++|..-.- -+.|.++|. +.+..++ ++|.|++..+... +.-+|- +|..+
T Consensus 307 ~iivv~~l~ea~~~~N~~APE-HLei~~~~~---~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR 377 (431)
T PLN02926 307 FIVVARDMAEAISFSNLYAPE-HLIVNVEDA---ESWLDKIDNAGSVFLGRWTPESVGDYASGTNHVLPT-----YGYAR 377 (431)
T ss_pred EEEEECCHHHHHHHHHhhChH-hheehhcCH---HHHHhhcCccceeccCCCCchhhhccccCcCcccCC-----Cccee
Confidence 456779999999999996432 345888886 4556666 4899999765331 233444 45678
Q ss_pred cchHHHHHhhhhceEEE
Q 020284 303 EKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 303 ~~g~~~~~~~~~~k~i~ 319 (328)
+.|..+...|.++-++.
T Consensus 378 ~~sgLsv~~FlK~~s~~ 394 (431)
T PLN02926 378 MYGGVSLDSFLKYMTVQ 394 (431)
T ss_pred ecCCCcHHHhcceeeEE
Confidence 88888889998865543
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=90.48 E-value=16 Score=34.64 Aligned_cols=77 Identities=21% Similarity=0.362 Sum_probs=54.5
Q ss_pred EeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCCCCC---------CCCCCccCCCCCCCCC
Q 020284 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF---------DAAIPFGGYKQSGQGR 302 (328)
Q Consensus 233 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~---------~~~~p~gG~~~SG~g~ 302 (328)
.++.++|++|+++++|..-.- -+-|.++|... +..++ ++|.|++..+... +.-+|. +|..+
T Consensus 277 ~ii~~~~~~eai~~~N~~APE-HLel~~~~~~~---~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT-----~G~Ar 347 (390)
T cd06572 277 AIILVDDLEEAIELANEYAPE-HLELQTEDPEE---LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPT-----GGTAR 347 (390)
T ss_pred EEEEECCHHHHHHHHHhhchh-hheeHhcCHHH---HHhhCccceEEeecCCCchhhhccccCCCCccCC-----Cccee
Confidence 456779999999999996432 35688888744 56666 4899999876431 234555 45667
Q ss_pred cchHHHHHhhhhceEE
Q 020284 303 EKGSYSLSNYLQVKAV 318 (328)
Q Consensus 303 ~~g~~~~~~~~~~k~i 318 (328)
+.+..+...|.++-++
T Consensus 348 ~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 348 FYSGLSVDDFLKRITV 363 (390)
T ss_pred ecCCCCHHHheeccee
Confidence 7777888888886554
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=85.57 E-value=0.092 Score=50.42 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=78.0
Q ss_pred CCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceE---EeEeecChhHHHHHhh
Q 020284 172 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ---SILKYKDLDEVIQRSN 248 (328)
Q Consensus 172 ~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl---~v~~~~~~~eai~~~n 248 (328)
.+..++.+++..+.+..+++...+...+..+ .|-.+.++...+++.....++ .|++.. .....+...+.+.+.+
T Consensus 79 ~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d-~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~ 155 (501)
T KOG2450|consen 79 RDAAERGRLLRKLADLIEQDADVLAALEVLD-NGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTR 155 (501)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHhhhcccc-cCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEec
Confidence 3567788889999999988888887776543 466677787677776555444 344433 2334456677788888
Q ss_pred cCCCCceEEEecCC---HHHHHHHHHhcceeEEEEcCCCC
Q 020284 249 ASQYGLAAGVFTHN---LDTANTLMRALRVGSVWINCFDV 285 (328)
Q Consensus 249 ~~~~gl~~~v~t~d---~~~~~~~~~~l~~g~v~iN~~~~ 285 (328)
..+.|-...|---| .-.+.+++-.|.+|+++||-+..
T Consensus 156 ~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae 195 (501)
T KOG2450|consen 156 REPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAE 195 (501)
T ss_pred CCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCC
Confidence 99999544444434 45677889999999999998654
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=84.35 E-value=1.3 Score=48.51 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=52.1
Q ss_pred hhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHHH
Q 020284 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 82 (328)
Q Consensus 3 ~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~ 82 (328)
+.+++++|++||.+|+..++.. .+++ .++|+.+.+.+.-. .........++.|.|.|.....+.+.+
T Consensus 1202 ~~Ql~Aala~Gn~~v~~~~~~~-------~~~~--~~Lp~~v~~~v~~~----~~~~~~~~~~~avl~~G~~~~l~~~~~ 1268 (1318)
T PRK11809 1202 LTQLAAVLAVGSQALWPDDALH-------RALV--AALPAAVQARIQLA----KDWQLADQPFDAVLFHGDSDQLRALCE 1268 (1318)
T ss_pred HHHHHHHHHhCCEEEEeCCchh-------HHHH--HhccHHHHhHhhhc----cccccccCCccEEEEeCCHHHHHHHHH
Confidence 5689999999999988754432 1222 45888887776321 122223456999999999999999999
Q ss_pred HHhhCC
Q 020284 83 LAAKSN 88 (328)
Q Consensus 83 ~~a~~~ 88 (328)
+.+++.
T Consensus 1269 ~LA~R~ 1274 (1318)
T PRK11809 1269 QVAQRD 1274 (1318)
T ss_pred HHhcCC
Confidence 888863
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=81.57 E-value=48 Score=31.24 Aligned_cols=75 Identities=16% Similarity=0.262 Sum_probs=49.1
Q ss_pred EeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCCCCC-------CCCCCccCCCCCCCCCcc
Q 020284 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF-------DAAIPFGGYKQSGQGREK 304 (328)
Q Consensus 233 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~-------~~~~p~gG~~~SG~g~~~ 304 (328)
.++.++|++|+++++|..-.- -+.|.+.+ .+..++ ++|.|+++++... +.-+|- +|..++.
T Consensus 257 ~iivv~~leeai~~~N~~APE-HLel~~~~-----~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLPT-----~G~AR~~ 325 (368)
T PRK13769 257 EVRKVAGVEEAVRFIDEIAPE-HLEVWGRR-----EVAYRVRNVGAVSVNMPSPYLDYVAGISHVLPT-----GGTARWR 325 (368)
T ss_pred eEEEECCHHHHHHHHHhhChH-heEeeCcH-----HHHhhCCccCChhcCCchhhhccccCCCCcCCC-----Ccceecc
Confidence 567889999999999996432 23345522 244566 4899999664322 223444 4566777
Q ss_pred hHHHHHhhhhceEE
Q 020284 305 GSYSLSNYLQVKAV 318 (328)
Q Consensus 305 g~~~~~~~~~~k~i 318 (328)
|..+...|.++-++
T Consensus 326 sgLsv~~FlK~~t~ 339 (368)
T PRK13769 326 GIITPLTFMKPIGV 339 (368)
T ss_pred CCCcHHHcccceeE
Confidence 77888888876554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 328 | ||||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-117 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-117 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-116 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-116 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-116 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-115 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-115 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-115 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-115 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-115 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-114 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-114 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-108 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-79 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-78 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 1e-78 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 7e-78 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-77 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-77 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-77 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 5e-77 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 1e-76 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 3e-76 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 3e-76 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 2e-75 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 3e-72 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 3e-72 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 6e-72 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 2e-70 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 3e-70 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 5e-70 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-64 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 7e-64 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 2e-63 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-62 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 1e-62 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-62 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-62 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-61 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 4e-59 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 1e-57 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 1e-57 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 2e-57 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 4e-56 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-55 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 2e-55 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 2e-54 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 1e-53 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 2e-53 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 3e-52 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 4e-52 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-51 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 1e-47 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-47 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 2e-46 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 3e-45 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 4e-45 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 8e-45 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 2e-44 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 5e-44 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 7e-44 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 1e-43 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 2e-42 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 2e-40 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 1e-39 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-39 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 4e-39 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 4e-39 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 5e-39 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-38 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 4e-38 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 6e-37 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 2e-35 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-32 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 3e-32 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 8e-32 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 1e-30 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-30 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 2e-30 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 1e-29 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 4e-29 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 2e-25 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-25 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 6e-25 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-24 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 1e-12 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 1e-12 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 1e-12 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 1e-12 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 2e-11 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 2e-07 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 3e-05 |
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 328 | |||
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 0.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 0.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 0.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 0.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 0.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 0.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 0.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 0.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 0.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 0.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 0.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 0.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 0.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 0.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 0.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 0.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 1e-178 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 1e-167 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 1e-155 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 1e-155 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 1e-150 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 1e-145 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 1e-142 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 1e-139 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 1e-137 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 1e-129 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-128 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 1e-126 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 1e-122 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 1e-121 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 1e-121 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 1e-121 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 1e-119 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 1e-118 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 1e-118 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 1e-117 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 7e-99 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 2e-93 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 2e-90 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 4e-89 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 2e-76 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 3e-73 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 5e-72 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 5e-71 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 6e-69 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 6e-59 |
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 610 bits (1575), Expect = 0.0
Identities = 195/326 (59%), Positives = 247/326 (75%), Gaps = 2/326 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MF WK+GPAL+CGNT+V+K AEQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++
Sbjct: 175 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAIS 234
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDK+AFTGST GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH
Sbjct: 235 SHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQG 294
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+F++QGQCC A SR FV ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKI
Sbjct: 295 VFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKI 354
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L I SG GAKLE GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K L
Sbjct: 355 LDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
D+VI+R+N + YGL+AG+FT+++D A T+ AL+ G+VW+NC+ V A PFGG+K SG
Sbjct: 415 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGN 474
Query: 301 GREKGSYSLSNYLQVKAVVTAL--KN 324
GRE G Y Y +VK V + KN
Sbjct: 475 GRELGEYGFHEYTEVKTVTIKISQKN 500
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 609 bits (1574), Expect = 0.0
Identities = 199/322 (61%), Positives = 243/322 (75%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 174 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 234 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQC CAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 294 LFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 354 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 473
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE G Y L Y +VK V +
Sbjct: 474 GRELGEYGLQAYTEVKTVTVKV 495
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 602 bits (1555), Expect = 0.0
Identities = 139/320 (43%), Positives = 211/320 (65%), Gaps = 2/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M +WK LA GNT+V+K A+ TPL+AL ++L +AG+P GV+NI+ G G G L+
Sbjct: 194 MLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLS 253
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V K+ FTGST GK +++ A SN+K V+LELGGKSP I+ D D++KA ++ +
Sbjct: 254 DHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSS 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFN+G+ C A R FV ES+++QFV+K K +G+P + GPQ K+
Sbjct: 314 VFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKL 373
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK-- 238
++Y + GV GA L GG ++ G++ +PTVFT V+D M IAK+E FGP+ I ++
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
D+D V+ R+NA+++GLA+GVFT +++ A + L+ G+V+IN ++ D A PFGG+KQS
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQS 493
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G G++ G +L+ YL++K V
Sbjct: 494 GFGKDLGEAALNEYLRIKTV 513
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 596 bits (1538), Expect = 0.0
Identities = 141/329 (42%), Positives = 201/329 (61%), Gaps = 3/329 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M WKV PALA G +LK +E L+ L + ++ E GLPPGVLNI++G GP AGA LA
Sbjct: 167 MATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLA 226
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +VDK+AFTGS+ TG ++ AA+ +KPV+LELGGKSP +V ED D+DKAAE A +
Sbjct: 227 THPDVDKVAFTGSSATGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFG 285
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F+ GQ C A SR +HES+ +F+ + + DP + G + GP + Q+EKI
Sbjct: 286 CFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKI 345
Query: 181 LKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
LK++ + GA + TGG R KG++I+PT+ T V +M I ++E+FGPV + +
Sbjct: 346 LKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFS 405
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
+E I +N + YGL A V +++L+ + +A + G VW+NC P+GG K+S
Sbjct: 406 TEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRS 465
Query: 299 GQGREKGSYSLSNYLQVKAVVTALKNPAW 327
G GRE G + L NYL VK V + W
Sbjct: 466 GFGRELGEWGLDNYLSVKQVTQYISEEPW 494
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 594 bits (1534), Expect = 0.0
Identities = 142/330 (43%), Positives = 196/330 (59%), Gaps = 3/330 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ + +V A+ G T+VLK +E T +++ +++L EAG+P GV N+V+GYG AG LA
Sbjct: 177 IASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLA 236
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
VD +AFTGS G + ++AA+ +K V LELGGK P IV DAD+D AA+ Y
Sbjct: 237 EDPNVDMVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYG 295
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
++ N GQCC +GSR V E + D +E+ ++ K GDP + G I EK+
Sbjct: 296 VYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKV 355
Query: 181 LKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
Y+ +G+ GA+L GGER+G G Y PTVF GV DM IA++EIFGPV S L +K
Sbjct: 356 HSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKT 415
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
DE + +NA+++GL+A V++ NL+TA +R +R G WIN +P GGYK+SG
Sbjct: 416 ADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSG 475
Query: 300 QGREKGSYSLSNYLQVKAVVTALKNPA-WL 328
GRE G Y Y Q K V L PA W
Sbjct: 476 LGRELGRYGFDEYSQFKGVHVTLGRPAPWF 505
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 590 bits (1523), Expect = 0.0
Identities = 125/331 (37%), Positives = 186/331 (56%), Gaps = 5/331 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+WK+ PALA G ++V+K +E TPL+ + V +L+ E G P G +N++ G G G ++
Sbjct: 186 QASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMS 245
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H EVD ++FTG TGK +++ AA +N+ + LELGGK+P I+ +DAD + A + A
Sbjct: 246 GHKEVDLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNG 304
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+F+ GQ C AGSR V S+ D+F + K +G+ F + GP I +E KI
Sbjct: 305 GYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKI 364
Query: 181 LKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
Y+ GA + GG+R G + +PTV T M I ++E+FGPV ++
Sbjct: 365 ESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEG 424
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 296
++ E IQ +N S YGLA VF+ ++ A + L++G+VWIN F + A P+GGYK
Sbjct: 425 FETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYK 484
Query: 297 QSGQGREKGSYSLSNYLQVKAVVTALKNPAW 327
QSG GRE G L YL K ++T
Sbjct: 485 QSGIGRELGKEGLEEYLVSKHILTNTNPQLV 515
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 583 bits (1505), Expect = 0.0
Identities = 140/330 (42%), Positives = 198/330 (60%), Gaps = 5/330 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ WK PAL GN +V K +E TPL AL ++++L EAGLP G+ N++ G T G L
Sbjct: 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLV 224
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +V K++ TGS TG+ V AA +LK VT+ELGGKSP IV +DAD++ A A
Sbjct: 225 NHPDVAKVSLTGSVPTGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLG 283
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F++ GQ C G+R FV + +F+E ++GDP GP + Q EK+
Sbjct: 284 NFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKV 343
Query: 181 LKYIRSGVDGGAKLETGG---ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237
L YI G GA L TGG + +G Y++PTVF V DDM IA++EIFGPV +L +
Sbjct: 344 LSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDF 403
Query: 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ 297
D DEV+ R+NA+++GLA GVFT +L A+ ++ L G++WIN +++ IPFGG KQ
Sbjct: 404 DDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQ 463
Query: 298 SGQGREKGSYSLSNYLQVKAVVTALKNPAW 327
SG GRE + +L +Y ++K V +
Sbjct: 464 SGFGRENSAAALEHYSELKTVYVSTGKVDA 493
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 581 bits (1501), Expect = 0.0
Identities = 140/334 (41%), Positives = 203/334 (60%), Gaps = 10/334 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ W++ PALA GNT+VLK AE +P +A ++++L EA LPPGV N+V G+G AGAAL
Sbjct: 178 LSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALV 237
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H V L TG T TGKIV++ AA +LK ++ ELGGKSP +V DAD+++A + +
Sbjct: 238 AHPLVPLLTLTGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQ 296
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+F G+ C A SR V E +++ FV K A VG P + GP I E +++
Sbjct: 297 IFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRV 356
Query: 181 LKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 232
L Y+ +G GA+L GGER ++G Y+ PTVF G ++ M IA++EIFGPV
Sbjct: 357 LGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVL 415
Query: 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPF 292
+ +KD +E ++++N ++YGLAA VFT +L+ A+ L L G V++N +V PF
Sbjct: 416 VAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPF 475
Query: 293 GGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPA 326
GG K SG RE G+Y+L Y +K + L+ P
Sbjct: 476 GGVKGSGDRREGGTYALDFYTDLKTIALPLRPPH 509
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 579 bits (1496), Expect = 0.0
Identities = 131/328 (39%), Positives = 196/328 (59%), Gaps = 8/328 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ AWK PALACGN +V K + TP++ + ++++ HEAG+P G++N+V G G G+ L
Sbjct: 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLC 229
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H V K++FTGS TGK V++++AK +K VTLELGGKSP ++ +D +++ A A A
Sbjct: 230 HHPNVAKVSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMA 288
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F QGQ C G+R FV + QF+E+ VVGDP + G I Q +K+
Sbjct: 289 NFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKV 348
Query: 181 LKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 234
L ++ GA++ GGE L GY++ P V +DDM K+EIFGPV S+
Sbjct: 349 LGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSV 408
Query: 235 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGG 294
L + +EV+QR+N + +GLA+GVFT ++ A+ + L G+ +IN + + +PFGG
Sbjct: 409 LPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGG 468
Query: 295 YKQSGQGREKGSYSLSNYLQVKAVVTAL 322
YK SG GRE G ++ Y Q+K V+ +
Sbjct: 469 YKMSGFGRENGQATVDYYSQLKTVIVEM 496
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 566 bits (1462), Expect = 0.0
Identities = 110/323 (34%), Positives = 174/323 (53%), Gaps = 3/323 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PA+ GNT+V K +EQTPL+AL +++L+ + LP GV+N+++G G T G AL
Sbjct: 177 MMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALI 235
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +V ++ TG TGK VL AAK +K LELGGK+P IV DAD++
Sbjct: 236 NHPKVGMVSITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTF 294
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
++N GQ C A R + +Y++ V + + GP I Q +++
Sbjct: 295 GYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRV 354
Query: 181 LKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
++ D ++ TGG +G++ +PTV G + I + E+FGPV S+ ++
Sbjct: 355 ASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTG 414
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
D+ + +N S YGLA+ V+T ++ A L+ G WIN + +P GG KQSG
Sbjct: 415 KDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSG 474
Query: 300 QGREKGSYSLSNYLQVKAVVTAL 322
G++ Y+L +Y V+ ++
Sbjct: 475 YGKDMSVYALEDYTAVRHIMINH 497
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 566 bits (1460), Expect = 0.0
Identities = 117/319 (36%), Positives = 176/319 (55%), Gaps = 3/319 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GN +VLK +E TPL+AL +++L + P GV+NI+ G G T G L
Sbjct: 175 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLT 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V ++ TGS TG+ ++ A S++K +ELGGK+P IV +DAD++ E
Sbjct: 234 GHPKVRMVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTF 292
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
++N GQ C A R + + +YD VEK A G P + GP E++
Sbjct: 293 GYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERV 352
Query: 181 LKYIRSGV-DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
K + G K+ TGGE+ GYY PT+ G D I + E+FGPV S+ + +
Sbjct: 353 GKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDN 412
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
++V+ +N SQYGLA+ V+T ++ A+ + L+ G W+N + + +P GG K SG
Sbjct: 413 EEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSG 472
Query: 300 QGREKGSYSLSNYLQVKAV 318
G++ Y L +Y V+ V
Sbjct: 473 YGKDMSLYGLEDYTVVRHV 491
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 526 bits (1358), Expect = 0.0
Identities = 129/322 (40%), Positives = 198/322 (61%), Gaps = 5/322 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ K+ A A G+ +VLK +E+TP +A+ ++++ + G+P GV N+V+G G G L+
Sbjct: 155 QTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLS 214
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V ++FTGS TG +++ AAK + K V+LELGGKSP+IV +D D+ +AA+
Sbjct: 215 EHPKVRMMSFTGSGPTGSKIMEKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGK 273
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ N GQ C AG+R V + D F+ + + VG+P + G Q GP I +QF+++
Sbjct: 274 VVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQV 333
Query: 181 LKYIRSGVDGGAKLETGGERLGA---KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237
YI G++ GA+L GG KGY+ +PT+F V + M IA++EIFGPV S++ Y
Sbjct: 334 QNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITY 393
Query: 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ 297
DLDE IQ +N ++YGLA V + +T + + R++ G+V IN +PFGGYKQ
Sbjct: 394 NDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAG-RKPDLPFGGYKQ 452
Query: 298 SGQGREKGSYSLSNYLQVKAVV 319
SG GRE G Y + +L+VK++
Sbjct: 453 SGLGREWGDYGIEEFLEVKSIA 474
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 525 bits (1355), Expect = 0.0
Identities = 128/329 (38%), Positives = 183/329 (55%), Gaps = 5/329 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ K+ PAL G TIVLK A +TPL+A ++++ E GLP GVL++V G G G AL
Sbjct: 162 LAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALT 220
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
S+ ++D FTGS+ G+ V + AA+ LKP TLELGGKS I+ ED D+ A + ++
Sbjct: 221 SNPDIDMFTFTGSSAVGREVGRRAAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFS 279
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
N GQ C +R S YD+ V VG P Q GP I +Q ++
Sbjct: 280 GVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRV 339
Query: 181 LKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
YI G++ GA+L GG R G++I+PTVF V + M IA++EIFGPV +I+ Y
Sbjct: 340 EGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYD 399
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
++ I +N S YGLA V+T ++ + + +R G+ IN + FD PFGGYK S
Sbjct: 400 TEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWY-AFDPGSPFGGYKNS 458
Query: 299 GQGREKGSYSLSNYLQVKAVVTALKNPAW 327
G GRE G + ++ Q K+V+ +
Sbjct: 459 GIGRENGPEGVEHFTQQKSVLLPMGYTVA 487
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 523 bits (1350), Expect = 0.0
Identities = 122/326 (37%), Positives = 172/326 (52%), Gaps = 9/326 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ + GNT+VLK A TP+ A ++L +AGLP GV+N V G G G L
Sbjct: 188 IMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLV 247
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAE 115
H + + FTGS G + + AA ++LK V +E+GGK +V DAD+D AAE
Sbjct: 248 DHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAE 307
Query: 116 LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 175
+ F GQ C AGSR +H+ VYD+ +EK ALA VGDP GP ID +
Sbjct: 308 SILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEK 367
Query: 176 QFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
FEKI+ YI G G +L TGGE + G++I+PT+ + + +I ++EIFGPV +
Sbjct: 368 AFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFS 426
Query: 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFG 293
K D D ++ +N ++YGL V T N R VG+++ N C PFG
Sbjct: 427 KANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFG 486
Query: 294 GYKQSGQG-REKGSYSLSNYLQVKAV 318
G+K SG + G L+ ++Q K V
Sbjct: 487 GFKMSGTDSKAGGPDYLALHMQAKTV 512
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 518 bits (1337), Expect = 0.0
Identities = 125/321 (38%), Positives = 186/321 (57%), Gaps = 6/321 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
KV PAL G T+VLK +E PLSA+ +++L EA LP GV N+++G G G+ L+
Sbjct: 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLS 236
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +++ ++FTGST GK + + A+ LK V LELGGK I+ DAD+D A +
Sbjct: 237 AHPDLEMISFTGSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADADID-ALQRGVRH 294
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F+N GQ C A +R V +++YD+ ++ A +A K VG + G GP + EQ++KI
Sbjct: 295 CFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKI 354
Query: 181 LKYIRSGVDGGAKLETGGERLGA---KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237
I+SG+D GA L TGG L +GYY++PTVF VK M I ++EIFGPV S+L +
Sbjct: 355 QDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPF 414
Query: 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ 297
DE + +N ++YGL + + + + +R G V +N + FGG K
Sbjct: 415 NTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHE-LPGGSYFGGVKF 473
Query: 298 SGQGREKGSYSLSNYLQVKAV 318
SG+ RE G + + +L KA+
Sbjct: 474 SGRAREGGLWGIKEFLDTKAI 494
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 501 bits (1292), Expect = e-178
Identities = 116/326 (35%), Positives = 172/326 (52%), Gaps = 10/326 (3%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+F + +A GNT++ K AE + V ++ HEAG PPGV+N + G G GA L
Sbjct: 189 IFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLV 248
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAE 115
H + + FTGS G + + A + + K +E GGK+ IV E AD D AAE
Sbjct: 249 EHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAE 308
Query: 116 LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 175
+ + QGQ C A SR + + Y+ +E+ A + VG P + GP + +E
Sbjct: 309 GVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAE 367
Query: 176 QFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
Q K+L YI G + G +L GG+RL +GY+I PTVFT V IA++EIFGPV S++
Sbjct: 368 QERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426
Query: 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFG 293
+ KD E ++ +N + YGL GV++ + R VG+++ N PFG
Sbjct: 427 RVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFG 486
Query: 294 GYKQSGQGREKGS-YSLSNYLQVKAV 318
G+K SG + G+ L +L++KAV
Sbjct: 487 GFKLSGTNAKTGALDYLRLFLEMKAV 512
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 475 bits (1224), Expect = e-167
Identities = 115/321 (35%), Positives = 172/321 (53%), Gaps = 6/321 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVS-KLLHEAGLPPGVLNIVSGYGPTAGAAL 59
+ V PALA GN +V+K A TP++ + ++ EAG+P GV++ V+G G G
Sbjct: 164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHF 223
Query: 60 ASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAH 118
+H ++FTGST G+ V +LA +K V LELGG +PF+V DAD+D AA+ A
Sbjct: 224 VTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAA 283
Query: 119 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 178
F +QGQ C + +R V +V+D+F+EK GDP G GP I+ Q
Sbjct: 284 VGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLS 343
Query: 179 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
+ + I GA ++ G +G + P VF+ V DM IA++EIFGP+ S+LK
Sbjct: 344 GLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQ 297
D + +NAS +GL+A V++ ++D A + G V IN V D + FGG K
Sbjct: 401 DEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKN 460
Query: 298 SGQGREKGSYSLSNYLQVKAV 318
SG GR G +++ + + +
Sbjct: 461 SGLGRFNGDWAIEEFTTDRWI 481
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 444 bits (1145), Expect = e-155
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 11/332 (3%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
K+ + GN +V+K + PL A K L +AG PP + +++ G +
Sbjct: 173 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIV 231
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ V ++FTGST G+ + +K +ELGG P IV EDAD+D AA+
Sbjct: 232 ADDRVAAVSFTGSTEVGER---VVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARG 288
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
++ GQ C A VY + VE+ VGDP + GP I +++
Sbjct: 289 IYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEM 348
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG---VKDDMLIAKDEIFGPVQSILKY 237
+ I V+ G ++ GG RLG Y++PT DM++ K E+F PV ++
Sbjct: 349 MAAIEDAVEKGGRVLAGGRRLG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406
Query: 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI-PFGGYK 296
KDLD+ I+ +N YGL A VF ++ +R L VG+++IN PFGG K
Sbjct: 407 KDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRK 466
Query: 297 QSGQGREKGSYSLSNYLQVKAVVTALK-NPAW 327
+SG RE Y++ K +V K W
Sbjct: 467 KSGVFREGIGYAVEAVTAYKTIVFNYKGKGVW 498
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 442 bits (1139), Expect = e-155
Identities = 120/326 (36%), Positives = 165/326 (50%), Gaps = 8/326 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A K+ PAL GNT+V K A Q LS + + + L +AG P G++ +V+G G G L
Sbjct: 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLV 227
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +D + FTG TTTG+ ++ K+ + PV LELGGK P IV +DAD+ A
Sbjct: 228 EHPGIDMITFTGGTTTGER---ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSG 284
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F GQ C A R FV +SV DQ V L + VG P P ID + I
Sbjct: 285 AFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFI 343
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
I ++ GA L +G +R +G + PT+ V M +A +E FGPV I++ KD
Sbjct: 344 QGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSG 299
+E I SN S YGL A +FT + D A + + L VG+V IN PF G K+SG
Sbjct: 401 NEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSG 460
Query: 300 QGREKGSYSLSNYLQVKAVVTALKNP 325
G + SL + + + V L
Sbjct: 461 LGVQGIKPSLLSMTRERVTVLNLAEN 486
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 430 bits (1108), Expect = e-150
Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 13/333 (3%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAG 56
+ A K+ PA+A GN IV + + PL + ++K++ A +P GV N+++G G G
Sbjct: 146 LSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVG 205
Query: 57 AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 116
+ + +V+ ++FTGS+ G+++ + A K + LELGG +P IV +DAD++KA
Sbjct: 206 DEIVVNEKVNMISFTGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNA 262
Query: 117 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQ 176
F GQ C + V ES+ D+F+E A VG+P GP I E
Sbjct: 263 LIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEH 322
Query: 177 FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
E + K + +D G KL GG+R PT+ V D ++ K E F PV I++
Sbjct: 323 AEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTILE-VDRDNILCKTETFAPVIPIIR 378
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGY 295
+ +E+I +N+++YGL + +FT++++ + L G V IN +F +PFGG
Sbjct: 379 TNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGV 437
Query: 296 KQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 328
K+SG GRE Y++ +K ++ + +
Sbjct: 438 KKSGLGREGVKYAMEEMSNIKTIIISKAENLYF 470
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 417 bits (1074), Expect = e-145
Identities = 96/320 (30%), Positives = 143/320 (44%), Gaps = 5/320 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ + PAL GN +V K +E TP A K +AGLP GVLN+V G G G ALA
Sbjct: 155 LPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALA 213
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +D L FTGS+ TG ++ K + LE+GG +P +V E AD+D A +
Sbjct: 214 AHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQS 273
Query: 121 LFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDPF-KGGIQQGPQIDSEQFE 178
F + GQ C R V + + D + + A++ VG + G I E
Sbjct: 274 AFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAE 333
Query: 179 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
+LK + GA+ + + P + V +E FGP+ +++Y
Sbjct: 334 HLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYS 392
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN-CFDVFDAAIPFGGYKQ 297
D I+ +NA+QYGLAAG+ + + + + R G V N ++ PFGG
Sbjct: 393 DFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGA 452
Query: 298 SGQGREKGSYSLSNYLQVKA 317
SG R Y+ A
Sbjct: 453 SGNHRPSAYYAADYCAYPVA 472
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 411 bits (1059), Expect = e-142
Identities = 76/362 (20%), Positives = 129/362 (35%), Gaps = 37/362 (10%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAAL 59
K PAL G +++K A T + + +AG LPPG L+I+ G ++ L
Sbjct: 167 GLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLL 223
Query: 60 ASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADV-----DKA 113
D ++FTGS T + A + ++ + I+C DA D
Sbjct: 224 DQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLF 283
Query: 114 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQID 173
+ + GQ C A R FV E+ + +E A K VG+P ++ G +
Sbjct: 284 IKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVS 343
Query: 174 SEQFEKILKYIRSGVDGGAKLETGGERL-----GAKGYYIKPTVF--TGVKDDMLIAKDE 226
EQ+E +L I + + + P +F + L+ E
Sbjct: 344 REQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVE 403
Query: 227 IFGPVQSILKYKDLD--------EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 278
+FGPV S+ Y+ + + Q L A +++++ L L
Sbjct: 404 VFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHG 463
Query: 279 WINCFDVFDAAI-----------PFGGYKQSGQGREKGSY-SLSNYLQVKAVVTALKNPA 326
++ GG ++G G E G +L+ Y + A+ A
Sbjct: 464 RVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAASAAIG 523
Query: 327 WL 328
L
Sbjct: 524 TL 525
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 400 bits (1031), Expect = e-139
Identities = 116/324 (35%), Positives = 166/324 (51%), Gaps = 8/324 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ K+ PAL GN I K Q +S L +++ EAGLP GV N ++G G G +
Sbjct: 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIV 218
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H V+ + FTGST G+ + ++A ++P+ LELGGK IV EDAD++ A+
Sbjct: 219 EHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAG 275
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F GQ C A R V ESV D+ VEK + +G+P P ID++ + +
Sbjct: 276 AFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYV 334
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
I D GA T +R +G I P +F V DM +A +E FGPV I++ +
Sbjct: 335 EGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSG 299
+E I+ SN S+YGL A +FT++ A + L VG+V IN PF G K+SG
Sbjct: 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSG 451
Query: 300 QGREKGSYSLSNYLQVKAVVTALK 323
G + YS+ VK+VV +K
Sbjct: 452 AGIQGVKYSIEAMTTVKSVVFDIK 475
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 396 bits (1019), Expect = e-137
Identities = 114/319 (35%), Positives = 180/319 (56%), Gaps = 2/319 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A K+ PAL GNTIV+K +E TP +A+ +K++ E GLP GV N+V G G T G LA
Sbjct: 158 LIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELA 217
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ +V ++ TGS + G+ ++ AA N+ V LELGGK+P IV +DAD++ A + +
Sbjct: 218 GNPKVAMVSMTGSVSAGEKIMATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDS 276
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEK 179
N GQ C R +V + +YDQFV + G+P + I GP I++ E+
Sbjct: 277 RVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALER 336
Query: 180 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
+ + + V+ GA++ GG+ + KGYY PT+ V+ +M I +E FGPV ++ +
Sbjct: 337 VEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDT 396
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
L++ I +N S YGL + ++T NL+ A ++ L+ G +IN + G+++SG
Sbjct: 397 LEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSG 456
Query: 300 QGREKGSYSLSNYLQVKAV 318
G G + L YLQ + V
Sbjct: 457 IGGADGKHGLHEYLQTQVV 475
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 375 bits (966), Expect = e-129
Identities = 109/318 (34%), Positives = 164/318 (51%), Gaps = 6/318 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 59
+ + PA+A GN++V K QT +S ++K AGLP GVLN++ G +
Sbjct: 159 LSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGM 218
Query: 60 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 119
++ ++FTGST G+ + ++A K + LELGG +PF V DADVD+A + A +
Sbjct: 219 LTNPIPRLISFTGSTAVGRHIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIF 277
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
F +QGQ C +R VH+ VYD+FVEK A + GD GP I+ Q EK
Sbjct: 278 GKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEK 337
Query: 180 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
L+ I G +L G+R+ G + P VF G ++ IA+ E+F P+ +I+K
Sbjct: 338 ALEIIEQAKTDGIELAVEGKRV---GNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGS 394
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQS 298
E I +N ++YGL++ VFT +L+ + G +N V D+ I FGG K S
Sbjct: 395 DQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKAS 454
Query: 299 GQGREKGSYSLSNYLQVK 316
G GR + + + K
Sbjct: 455 GVGRFGNPWVVEEFTVTK 472
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 389 bits (1002), Expect = e-128
Identities = 105/326 (32%), Positives = 171/326 (52%), Gaps = 9/326 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A+ GN +V K + T + ++ +L EAGLP GV N G G G L
Sbjct: 682 ISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLV 741
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAE 115
H ++ +AFTGS TG +++ AAK +N+K + E+GGK+ I+ +DAD+D+A
Sbjct: 742 DHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVP 801
Query: 116 LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 175
Y+ F QGQ C A SR V ++VYD+F+E+ ++A VG G D +
Sbjct: 802 HVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDK 861
Query: 176 QFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
+ I +Y G G L +GY++ T+ G+K + IA++EIFGPV +++
Sbjct: 862 AMKSIKEYAEIGKREGHVLY-ESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVM 920
Query: 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFG 293
+ KD D+ I+ +N++Q+ L G+F+ + + R RVG+++IN + PFG
Sbjct: 921 RAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFG 980
Query: 294 GYKQSGQG-REKGSYSLSNYLQVKAV 318
G + SG G + G L +++ + V
Sbjct: 981 GARMSGVGTKAGGPDYLLHFMDPRVV 1006
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 369 bits (950), Expect = e-126
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 9/325 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAG 56
++ W A+ CGN + K A T L ++ V+K++ + LP + ++ G G G
Sbjct: 173 VYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIG 231
Query: 57 AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 116
A+A V+ L+FTGST GK V + + LELGG + I EDAD+
Sbjct: 232 TAMAKDERVNLLSFTGSTQVGKQVGLMVQER-FGRSLLELGGNNAIIAFEDADLSLVVPS 290
Query: 117 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQ 176
A +A GQ C R F+HES++D+ V + + VG+P+ + GP +
Sbjct: 291 ALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQA 350
Query: 177 FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
L + G + GG+ + G Y++PT+ TG+ D IA E F P+ + K
Sbjct: 351 VSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFK 410
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM--RALRVGSVWINCFDV-FDAAIPFG 293
+++ +EV +N + GL++ +FT +L + + G V +N + FG
Sbjct: 411 FQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFG 470
Query: 294 GYKQSGQGREKGSYSLSNYLQVKAV 318
G K +G GRE GS + Y++
Sbjct: 471 GEKHTGGGRESGSDAWKQYMRRSTC 495
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 358 bits (921), Expect = e-122
Identities = 123/322 (38%), Positives = 174/322 (54%), Gaps = 5/322 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ K+GPAL GNT+VLK ++TPL+ + ++ EAGLP GVLN+++G G G L
Sbjct: 164 LAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLC 223
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ TGST GK + + +A + PV LELGGK+P +V +DAD+DKAAE A +
Sbjct: 224 ESPITKMITMTGSTVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWG 282
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F N GQ C R +VH SVYD+F+ K L VGDP Q GP+ + + + I
Sbjct: 283 RFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNI 342
Query: 181 LKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
+ + GA + TGG+ G + +PTV VK D ++ +E FGP+ I+K
Sbjct: 343 DHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVK 402
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 296
+++ I+ N S YGL+A V T + N + L VG V+IN G+K
Sbjct: 403 VSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWK 462
Query: 297 QSGQGREKGSYSLSNYLQVKAV 318
QSG G E G + L YL+ K V
Sbjct: 463 QSGFGGEDGKFGLEQYLEKKTV 484
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 356 bits (916), Expect = e-121
Identities = 127/322 (39%), Positives = 189/322 (58%), Gaps = 1/322 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M K GPALA G T+VLK A QTP SAL +++L AG+P GV N+V+G G L
Sbjct: 161 MITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELT 220
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
S+ V KL+FTGST G+ +++ A ++K V+LELGG +PFIV +DAD+DKA E A +
Sbjct: 221 SNPLVRKLSFTGSTEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALAS 279
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F N GQ C +R +V + VYD+F EK K +GD G+ GP ID + K+
Sbjct: 280 KFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKV 339
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
++I ++ GA++ GG+ G + +PT+ V + ++K+E FGP+ + ++KD
Sbjct: 340 EEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE 399
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+VI ++N +++GLAA + +L + AL G V IN + + PFGG K SG
Sbjct: 400 ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGL 459
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE Y + +YL++K + L
Sbjct: 460 GREGSKYGIEDYLEIKYMCIGL 481
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 356 bits (915), Expect = e-121
Identities = 132/322 (40%), Positives = 192/322 (59%), Gaps = 1/322 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M A KVGPALA G IV+K AE TP SAL ++ L AG+P GVL++V G G +
Sbjct: 164 MIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEIT 223
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
S+ V KL+FTGST G++++ +A +K +TLELGG +PFIV +DAD+D A E A +
Sbjct: 224 SNPIVRKLSFTGSTAVGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIAS 282
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ N GQ C +R FVHE VYD F +K A K VG + G GP I+ +K+
Sbjct: 283 KYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKV 342
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+I + GA L TGG+R + +PTV TGVK DM +AK+E FGP+ + ++
Sbjct: 343 ESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASE 402
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+E+++ +N +++GLAA +++ ++ + AL G V IN + + PFGG KQSG
Sbjct: 403 EELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGL 462
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE Y + +Y+ +K + A+
Sbjct: 463 GREGSHYGIDDYVVIKYLCVAV 484
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 356 bits (916), Expect = e-121
Identities = 132/323 (40%), Positives = 190/323 (58%), Gaps = 3/323 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M K PALA G T++++ A+ TPL+AL + L +AG+P GVL IV+G GA L
Sbjct: 184 MITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELT 243
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
S+ V KL+FTGST G++++ A +K ++LELGG +PFIV +DAD+D A + A +
Sbjct: 244 SNDTVRKLSFTGSTEVGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVS 302
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ N GQ C +R +V VYD+F EK A + VG+ + G+ GP I+ + K+
Sbjct: 303 KYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKV 362
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+I V GAKL TGG+ LG G + +P + TGV DML+AK+E FGP+ + +
Sbjct: 363 KAHIEDAVSKGAKLITGGKELG--GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTE 420
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EVI ++N + +GLAA +T N A + AL G V N + + PFGG KQSG
Sbjct: 421 EEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGL 480
Query: 301 GREKGSYSLSNYLQVKAVVTALK 323
GRE Y + YL+ K + +A K
Sbjct: 481 GREGSKYGIEEYLETKYICSAYK 503
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 351 bits (903), Expect = e-119
Identities = 115/328 (35%), Positives = 171/328 (52%), Gaps = 2/328 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M A K+ ALA G V+K A +TPL+ + ++ + LP G++N+V G G L
Sbjct: 163 MIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLC 222
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V L+FTGST G+ ++ A +K + LELGG +PFIV +DAD++ AA+
Sbjct: 223 EHKDVPMLSFTGSTEVGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIAN 281
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F GQ C +R FVHE V D F +K K VGD GI GP I+ + F+K+
Sbjct: 282 KFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKV 341
Query: 181 LKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
++++ +D GA L G + G + PTV GV +M ++E FGP+ + ++
Sbjct: 342 KRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRT 401
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
+EVI N +++GLA+ VFT + + A + LR G V N PFGG K SG
Sbjct: 402 EEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASG 461
Query: 300 QGREKGSYSLSNYLQVKAVVTALKNPAW 327
GRE G L +++ + V +
Sbjct: 462 IGREGGLEGLFEFVEAQTVPRGFAENLY 489
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 348 bits (895), Expect = e-118
Identities = 125/322 (38%), Positives = 183/322 (56%), Gaps = 5/322 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV---SGYGPTAGA 57
M KVG ALA G T+V+K AE TP SAL +++L +AG+P GV N++ G
Sbjct: 162 MITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE 221
Query: 58 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 117
A+ + V K++FTGSTTTGKI+L AA +++K V++ELGG +PFIV + A+VD+A A
Sbjct: 222 AICTDPLVSKISFTGSTTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGA 280
Query: 118 HYALFFNQGQCCCAGSRTFVHESVYDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQ 176
+ F N GQ C ++ V ++D FV+ A A+ VG+ F+ G QGP I+ +
Sbjct: 281 MASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKA 340
Query: 177 FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
EK+ K + V GA + TGG+R + +PT+ V DML +E FGP+ ++K
Sbjct: 341 VEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIK 400
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 296
+ +E I +NA+ GLA ++ + + L VG V +N + PFGG K
Sbjct: 401 FDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVK 460
Query: 297 QSGQGREKGSYSLSNYLQVKAV 318
QSG GRE Y + YL++K V
Sbjct: 461 QSGLGREGSKYGIDEYLELKYV 482
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 347 bits (894), Expect = e-118
Identities = 97/320 (30%), Positives = 148/320 (46%), Gaps = 2/320 (0%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
P GN I+LK A P SA +K++ AG P G L + +A
Sbjct: 143 VFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIA-DPR 201
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
+ +A TGS G V + A K NLK T+ELGG FIV +DAD + + A +N
Sbjct: 202 IQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYN 260
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C + R V +S YD+ + + + GDP + P + EK+ +
Sbjct: 261 DGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQV 320
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
+ +D GAK+ + +KG + +PT+ T + D + E+FGP+ + +D + I
Sbjct: 321 KEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAI 380
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 304
Q +N S YGL + V ++D A + + G IN + +PFGG K+SG GRE
Sbjct: 381 QLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGREL 440
Query: 305 GSYSLSNYLQVKAVVTALKN 324
L ++ V+ KN
Sbjct: 441 SGLGLMAFVNEHLVIDVTKN 460
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 344 bits (884), Expect = e-117
Identities = 102/315 (32%), Positives = 151/315 (47%), Gaps = 2/315 (0%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
P L GN+ +LK A A ++++L EAG P GV V+ +
Sbjct: 146 GAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMIN-DPR 204
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
+ + TGS G + A LK LELGG PFIV DAD++ A + A + N
Sbjct: 205 IAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQN 263
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C A R V E + F ++ A A +GDP GP + +++ + +
Sbjct: 264 TGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQV 323
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
++ V GA+L GGE++ +G Y TV V DM + E+FGPV +I KD +
Sbjct: 324 QASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHAL 383
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 304
+N S++GL+A +FT + A + L G V+IN + DA + FGG K+SG GRE
Sbjct: 384 ALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGREL 443
Query: 305 GSYSLSNYLQVKAVV 319
+ L + V+ V
Sbjct: 444 SHFGLHEFCNVQTVW 458
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 300 bits (769), Expect = 7e-99
Identities = 67/336 (19%), Positives = 120/336 (35%), Gaps = 34/336 (10%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAAL 59
ALA G +++K P ++ V++ + +A LP + ++ G G AL
Sbjct: 157 GDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQAL 216
Query: 60 ASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKA--AEL 116
SH E+ + FTGS G+ + LA + P ELG +P + A KA A+
Sbjct: 217 VSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQ 276
Query: 117 AHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 175
++ GQ C F + F+E A +L P I
Sbjct: 277 FVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSL------IRQQSPSTLLTPGIRDS 330
Query: 176 QFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML---IAKDEIFGPVQ 232
+ + G D G + + +F ++ ++EIFGP
Sbjct: 331 YQS---QVVSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQS 383
Query: 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT--ANTLMRAL--RVGSVWINCF---DV 285
I+ +++ +++ S L A + D + L+ L G + N +
Sbjct: 384 LIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVE 443
Query: 286 FDAAIPFGGYKQS---GQGREKGSYSLSNYLQVKAV 318
A+ GG + G+ ++ +L+ A
Sbjct: 444 VGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAY 479
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 297 bits (763), Expect = 2e-93
Identities = 96/324 (29%), Positives = 159/324 (49%), Gaps = 13/324 (4%)
Query: 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 61
F +V AL GN++V K AEQTP A LLHEAG+P L +V+G G GAAL +
Sbjct: 666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGR-IGAALTA 724
Query: 62 HMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHY 119
H ++ + FTGST + + + A + + P+ E GG + I A ++ A+
Sbjct: 725 HPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVT 784
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
+ F + GQ C A FV E V D+ +E A + +GDP GP ID E ++
Sbjct: 785 SAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQR 844
Query: 180 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK- 238
+ +I A+L G +G ++ P +F + +E+FGP+ +++Y+
Sbjct: 845 LDAHIARM-KTEARLHFAGPA--PEGCFVAPHIFELTEAG--QLTEEVFGPILHVVRYRP 899
Query: 239 -DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGY 295
+L+ V++ + YGL GV + D+ ++ ++VG++++N PFGG
Sbjct: 900 ENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGN 959
Query: 296 KQSGQG-REKGSYSLSNYLQVKAV 318
SG G + G + L+ + + V
Sbjct: 960 GLSGTGPKAGGPHYLARFATEQTV 983
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 276 bits (707), Expect = 2e-90
Identities = 62/345 (17%), Positives = 115/345 (33%), Gaps = 33/345 (9%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAG 56
+K +L N I+ + S +KL+ +A G P ++ +
Sbjct: 119 TAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELS 178
Query: 57 AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 116
AL H ++ + TG K AA S+ KP G P ++ E AD+ +A
Sbjct: 179 NALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVAS 233
Query: 117 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQ 176
+ F+ G C + V + VYD+ E+ + + +++ ID
Sbjct: 234 VLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDAD-KVRKVLLIDGAL 292
Query: 177 FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
KI+ + + E G ++ A + V D A E P + +
Sbjct: 293 NAKIVGQPATAI-----AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFR 346
Query: 237 YKDLDEVIQRS----NASQYGLAAGVFTH---NLDTANTLMRALRVGSVWINCFDVFDA- 288
+ ++ + ++ G +G++T+ N D ++ + IN
Sbjct: 347 ADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGI 406
Query: 289 --AIPFGGYKQS--GQGREKGSYSLSN-----YLQVKAVVTALKN 324
F G G G+ N + K V +N
Sbjct: 407 GDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN 451
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 275 bits (705), Expect = 4e-89
Identities = 77/334 (23%), Positives = 121/334 (36%), Gaps = 34/334 (10%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAA 58
ALA G +V+K P + V++ + A G+ PGV +++ G G A
Sbjct: 189 GGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHA 248
Query: 59 LASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELA 117
L H + + FTGS G+ + L A P ELG +P + +A +A L
Sbjct: 249 LVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLG 308
Query: 118 H---YALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQID 173
+L GQ C V E D+F A K GI + +
Sbjct: 309 QGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDG 368
Query: 174 SEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML---IAKDEIFGP 230
+F K E + G P +F L +E+FGP
Sbjct: 369 QARFAT---------RNAVKPLLATE---SSGRDASPNLFETTGAQFLADHALGEEVFGP 416
Query: 231 VQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD--TANTLMRAL--RVGSVWINCF--- 283
+ +++ E+ + + Q L A + D TA L L + G V +N F
Sbjct: 417 LGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTG 476
Query: 284 -DVFDAAIPFGGYKQSGQGREK--GSYSLSNYLQ 314
+V D+ + G Y S G+ S+ +L+
Sbjct: 477 VEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLR 510
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 243 bits (622), Expect = 2e-76
Identities = 91/325 (28%), Positives = 146/325 (44%), Gaps = 21/325 (6%)
Query: 6 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 65
G GN ++ K ++ L++ V ++L EAGLPP ++ V GPT G + S +
Sbjct: 220 AGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHL 279
Query: 66 DKLAFTGSTTTGKIVLQLAAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ FTGS T K + + A++ + E GGK+ V ADVD +
Sbjct: 280 CGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRS 339
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEK 179
F GQ C A SR +V +S++ Q + + VGDP + G ID++ F +
Sbjct: 340 AFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFAR 399
Query: 180 ILKYIRSG-VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
I K++ + GG+ + GYY++P + I K+EIFGPV ++ Y
Sbjct: 400 IKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYP 459
Query: 239 D--LDEVIQRSNA-SQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVFDAAI--- 290
D E ++ ++ + YGL VF + R LR G+ +IN ++
Sbjct: 460 DDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKST--GSVVGQ 517
Query: 291 -PFGGYKQSGQGREKGSYSLSNYLQ 314
PFGG + SG + G +Y+
Sbjct: 518 QPFGGARASGTNDKPGGP---HYIL 539
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 3e-73
Identities = 97/306 (31%), Positives = 150/306 (49%), Gaps = 16/306 (5%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
W A+A GNT +LK +E+TPL + +L +AGLP GV N+V G + H
Sbjct: 160 WMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHP 218
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
E+ ++F GS G+ V + ++ NLK V G K+ IV DA+++ A F
Sbjct: 219 EIKAISFVGSKPVGEYVYKKGSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFG 277
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ G+ C A + V E + D+F+ K +G+ G+ GP I + ++ L Y
Sbjct: 278 SAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSY 337
Query: 184 IRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 242
I G++ GA+L G GY++ PT+F V +M I KDEIF PV S+++ K+L E
Sbjct: 338 IEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKE 397
Query: 243 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIP-------FGGY 295
I+ +N S++ A +FT N + + G + IN +P F G+
Sbjct: 398 AIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGIN------LGVPAPMAFFPFSGW 451
Query: 296 KQSGQG 301
K S G
Sbjct: 452 KSSFFG 457
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 229 bits (586), Expect = 5e-72
Identities = 49/355 (13%), Positives = 103/355 (29%), Gaps = 50/355 (14%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE----AGLPPGVLNIVSGYGPTAG 56
+K ++ GN+IV + L +++ E AG P G ++ ++
Sbjct: 124 TVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGT 183
Query: 57 AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 116
L H + + TG + K AA S+ P G P + A++ +A +
Sbjct: 184 DQLMKHKDTAVILATGGSAMVK-----AAYSSGTPAIGVGPGNGPAFIERSANIPRAVKH 238
Query: 117 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEK--------ANALAMKRVVGDPFKGGIQQ 168
+ F+ G C + V + + + + ++ +
Sbjct: 239 ILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSM 298
Query: 169 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIF 228
P I + + I V A++ E T V + ++ E
Sbjct: 299 NPAIVGKSVQHIANLAGLTVPADARVLIAEE--------------TKVGAKIPYSR-EKL 343
Query: 229 GPVQSILKYKDLDEVIQRSNASQY----GLAAGVFTHNLDTANTLMRALRVGSVWINCFD 284
P+ + + E + S Y G + + + + V + +N
Sbjct: 344 APILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPG 403
Query: 285 VFDAA-----------IPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 328
+ G S G N ++ + T + +
Sbjct: 404 ALGGIGATTNLVPALTLGCGAVGGSSSSDNIGPE---NLFNIRRIATGVLELEDI 455
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 228 bits (583), Expect = 5e-71
Identities = 96/310 (30%), Positives = 151/310 (48%), Gaps = 20/310 (6%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
W PA+ACGN +LK +E+ P + +++L+ EAGLP G+LN+V+G A A+ +H
Sbjct: 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHP 239
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
++ ++F GST + V AA N K G K+ I+ DAD+D+AA A +
Sbjct: 240 DIAAVSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYG 298
Query: 124 NQGQCCCAGSRT-FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
+ G+ C A S V E ++ ++K + +G GP + E ++I
Sbjct: 299 SAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRS 358
Query: 183 YIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
I SG++ GAKL G G++I +F V DM I K EIFGPV S+++ +
Sbjct: 359 LIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIP------- 291
+ +E + +YG ++T + D A + +G V +N IP
Sbjct: 419 NYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVN------VPIPVPLAYHS 472
Query: 292 FGGYKQSGQG 301
FGG+K S G
Sbjct: 473 FGGWKSSSFG 482
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 221 bits (565), Expect = 6e-69
Identities = 97/328 (29%), Positives = 151/328 (46%), Gaps = 28/328 (8%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+A GN +VLK +E + A ++ ++ + L + +++G G L D +
Sbjct: 144 AIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVING-GVPETTELLKE-RFDHI 200
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 128
+TGST GKI++ AAK +L PVTLELGGKSP V ++ D+D A + F N GQ
Sbjct: 201 LYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQT 259
Query: 129 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKILKYI 184
C A S+ +Q VE +K+ + + + ++ I + F++++ I
Sbjct: 260 CVAPDYILCDPSIQNQIVE-----KLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLI 314
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
G K+ GG A YI PT+ T V + ++EIFGPV I+ + L+E I
Sbjct: 315 E-----GQKVAYGGTG-DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAI 368
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF----DAAIPFGGYKQSGQ 300
Q N + LA +F+ N ++ G V N DV ++PFGG SG
Sbjct: 369 QFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN--DVIVHITLHSLPFGGVGNSGM 426
Query: 301 GREKGSYSLSNYLQVKAVVTALKNPAWL 328
G G S + ++ L P
Sbjct: 427 GSYHGKKSFETFSHRRSC---LVRPLMN 451
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 6e-59
Identities = 88/305 (28%), Positives = 141/305 (46%), Gaps = 20/305 (6%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+ GNT ++K +E TP ++ + K++ EA P + ++ G G + L S D +
Sbjct: 154 AIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLSL-PFDFI 210
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 128
FTGS GK+V+Q AAK +L PV LELGGK P IV DAD+D+ + F N GQ
Sbjct: 211 FFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQT 269
Query: 129 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 188
A +VH SV D +E + V G + Q ++++ +
Sbjct: 270 XIAPDYLYVHYSVKDALLE-----RLVERVKTELPEINSTGKLVTERQVQRLVSLLE--- 321
Query: 189 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 248
++ G + + TV GV+ + + +E+FGP+ +L++ + I + N
Sbjct: 322 ATQGQVLVGSQA-DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVN 380
Query: 249 ASQ-YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF----DAAIPFGGYKQSGQGRE 303
LA VF ++D A ++ ++ G +N V +PFGG SG G
Sbjct: 381 KHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVN--GVMLHAFSPYLPFGGIGASGMGEY 438
Query: 304 KGSYS 308
G +S
Sbjct: 439 HGHFS 443
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 328 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 95.54 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 92.14 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-83 Score=620.12 Aligned_cols=323 Identities=46% Similarity=0.776 Sum_probs=310.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..|+++++++|+|+|++|+|+|++.+.++.|++||++|+|+||||+.+|++++
T Consensus 159 ~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 238 (490)
T 2wme_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998889999999999999999999999999998
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 239 ~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp 318 (490)
T 2wme_A 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDP 318 (490)
T ss_dssp HHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCC
Confidence 75544468999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.|+++++||+++..+++|++++|++++++|+++++||...+ ..|+|+.|||+.+++++|.+++||+||||++|++|
T Consensus 319 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 398 (490)
T 2wme_A 319 QDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398 (490)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred ccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEe
Confidence 99999999999999999999999999999999999998643 35899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|++|||+++|+++|||+++|||+|.++++++++++++|.||||++....+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 399 ~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~ 478 (490)
T 2wme_A 399 DDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKS 478 (490)
T ss_dssp SCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeE
Confidence 99999999999999999999999999999999999999999999987778899999999999999999999999999999
Q ss_pred EEEeCCC
Q 020284 318 VVTALKN 324 (328)
Q Consensus 318 i~~~~~~ 324 (328)
|++++.+
T Consensus 479 v~i~~g~ 485 (490)
T 2wme_A 479 VQVELGD 485 (490)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999754
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-81 Score=606.25 Aligned_cols=326 Identities=38% Similarity=0.689 Sum_probs=314.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 187 ~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~ 266 (520)
T 3ed6_A 187 ASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIM 266 (520)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 267 ~~aa~~-l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p 345 (520)
T 3ed6_A 267 KNAANN-VTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNG 345 (520)
T ss_dssp HHHHTT-TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCT
T ss_pred HHhhhc-CCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.|+++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|
T Consensus 346 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 425 (520)
T 3ed6_A 346 FDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGF 425 (520)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred ccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEe
Confidence 99999999999999999999999999999999999998642 46899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|++|||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+
T Consensus 426 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~ 505 (520)
T 3ed6_A 426 ETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKH 505 (520)
T ss_dssp SSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999988778999999999999999999999999999999
Q ss_pred EEEeCC--CCCCC
Q 020284 318 VVTALK--NPAWL 328 (328)
Q Consensus 318 i~~~~~--~~~~~ 328 (328)
|+++.. ...||
T Consensus 506 v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 506 ILTNTNPQLVNWF 518 (520)
T ss_dssp EEEESSCCCCCCS
T ss_pred EEEcCCCCccCcc
Confidence 999875 34565
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-81 Score=601.93 Aligned_cols=319 Identities=41% Similarity=0.649 Sum_probs=309.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 165 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~ 244 (484)
T 3ifg_A 165 IARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLM 244 (484)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 245 ~~aa~~-~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 323 (484)
T 3ifg_A 245 AQSAPT-VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRG 323 (484)
T ss_dssp HHTGGG-TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhcc-CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||+++..+++++++++++++++|+++++||...+..|+|+.|||+.+++++|.+++||+||||++|++|+|++
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 403 (484)
T 3ifg_A 324 TESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEE 403 (484)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHH
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHH
Confidence 99999999999999999999999999999999999998655579999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|+||+|+++|.+++++||+.|+|++.
T Consensus 404 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 404 ELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999999777789999999999999999999999999999999864
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-81 Score=601.21 Aligned_cols=319 Identities=29% Similarity=0.470 Sum_probs=309.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++ |++||++|+|+||||+.+|+.|+
T Consensus 140 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~ 218 (484)
T 3ros_A 140 VIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVA 218 (484)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997777777 99999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 219 ~~aa~~-lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 297 (484)
T 3ros_A 219 EAAGKN-LKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDP 297 (484)
T ss_dssp HHHHHT-TCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhcc-CCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999984 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||+++.+++++++++|++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 298 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 377 (484)
T 3ros_A 298 LEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDN 377 (484)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHH
T ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHH
Confidence 99999999999999999999999999999999999998655679999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 378 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 457 (484)
T 3ros_A 378 AAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDV 457 (484)
T ss_dssp HHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEEC
Confidence 99999999999999999999999999999999999999999877789999999999999999999999999999999987
Q ss_pred C
Q 020284 322 L 322 (328)
Q Consensus 322 ~ 322 (328)
.
T Consensus 458 ~ 458 (484)
T 3ros_A 458 T 458 (484)
T ss_dssp G
T ss_pred C
Confidence 5
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-80 Score=601.16 Aligned_cols=326 Identities=43% Similarity=0.776 Sum_probs=313.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|+.||++|+|+||||+.+|+.|+
T Consensus 168 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 247 (503)
T 3iwj_A 168 ATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIM 247 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 248 ~~aa~~-l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 326 (503)
T 3iwj_A 248 TAAAQL-VKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDP 326 (503)
T ss_dssp HHHGGG-TCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhcC-CCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
+++++++||++++++++++++++++++++|+++++||...+ ..|+|+.|||+.+++++|.+++||+||||++|++|+|
T Consensus 327 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 406 (503)
T 3iwj_A 327 LEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFST 406 (503)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCC
Confidence 99999999999999999999999999999999999997644 5799999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
++|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 407 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~ 486 (503)
T 3iwj_A 407 EEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVT 486 (503)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEE
Confidence 99999999999999999999999999999999999999999998777899999999999999999999999999999999
Q ss_pred EeCC--CCCCC
Q 020284 320 TALK--NPAWL 328 (328)
Q Consensus 320 ~~~~--~~~~~ 328 (328)
++.. ...||
T Consensus 487 ~~~~~~~~~~~ 497 (503)
T 3iwj_A 487 QYISEEPWGWY 497 (503)
T ss_dssp EECCSSCCCCS
T ss_pred EeCCCCccccc
Confidence 8864 34464
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-80 Score=601.27 Aligned_cols=320 Identities=36% Similarity=0.580 Sum_probs=310.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 164 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~ 243 (506)
T 3rh9_A 164 IAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLI 243 (506)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 244 ~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 322 (506)
T 3rh9_A 244 VDTAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDG 322 (506)
T ss_dssp HHTTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCT
T ss_pred HHhhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99988 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCC-CCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.|+++++||+++.++++|+++++++++++|+++++||...+. .|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 323 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (506)
T 3rh9_A 323 MNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTE 402 (506)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCH
Confidence 999999999999999999999999999999999999986444 7999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 403 deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~ 482 (506)
T 3rh9_A 403 EEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPR 482 (506)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999999988878899999999999999999999999999999988
Q ss_pred eC
Q 020284 321 AL 322 (328)
Q Consensus 321 ~~ 322 (328)
+.
T Consensus 483 ~~ 484 (506)
T 3rh9_A 483 GF 484 (506)
T ss_dssp C-
T ss_pred cC
Confidence 74
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-80 Score=601.01 Aligned_cols=319 Identities=43% Similarity=0.784 Sum_probs=308.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 195 ~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~ 274 (517)
T 2o2p_A 195 LSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIM 274 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHh-hCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a-~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 275 ~~aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGd 353 (517)
T 2o2p_A 275 KSCALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGN 353 (517)
T ss_dssp HHHHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSC
T ss_pred HHhHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence 9988 7 5999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC-
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD- 239 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~- 239 (328)
|+|+++++||+++.++++++++++++++++|+++++||...+..|+|+.|||+.+++++|.+++||+||||++|++|+|
T Consensus 354 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 433 (517)
T 2o2p_A 354 PLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433 (517)
T ss_dssp TTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTT
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCC
Confidence 9999999999999999999999999999999999999976444689999999999999999999999999999999999
Q ss_pred -hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 240 -LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 240 -~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
++|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 434 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v 513 (517)
T 2o2p_A 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513 (517)
T ss_dssp CSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEE
Confidence 9999999999999999999999999999999999999999999877778999999999999999999999999999999
Q ss_pred EEe
Q 020284 319 VTA 321 (328)
Q Consensus 319 ~~~ 321 (328)
+++
T Consensus 514 ~~~ 516 (517)
T 2o2p_A 514 TFE 516 (517)
T ss_dssp EEE
T ss_pred Eee
Confidence 876
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-80 Score=600.39 Aligned_cols=321 Identities=43% Similarity=0.724 Sum_probs=311.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 257 (528)
T 3u4j_A 178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLG 257 (528)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 258 ~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 336 (528)
T 3u4j_A 258 EIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDP 336 (528)
T ss_dssp HHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECT
T ss_pred HHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCC
Confidence 99988 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCC-CCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.|+++++||+++.++++++++++++++++|+++++||...+. .|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 337 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 416 (528)
T 3u4j_A 337 LNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTA 416 (528)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCH
Confidence 999999999999999999999999999999999999986543 7999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 417 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 496 (528)
T 3u4j_A 417 DEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHV 496 (528)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEE
T ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999988778999999999999999999999999999999998
Q ss_pred eCC
Q 020284 321 ALK 323 (328)
Q Consensus 321 ~~~ 323 (328)
+..
T Consensus 497 ~~~ 499 (528)
T 3u4j_A 497 TLG 499 (528)
T ss_dssp ESS
T ss_pred eCC
Confidence 863
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-80 Score=600.04 Aligned_cols=318 Identities=40% Similarity=0.668 Sum_probs=309.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 185 ~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 264 (504)
T 3ek1_A 185 ITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLM 264 (504)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 265 ~~aa~~-lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 343 (504)
T 3ek1_A 265 AQCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG 343 (504)
T ss_dssp HHHGGG-TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred Hhhhhh-cCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||+++.++++++++++++++++|+++++||.. ..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 344 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 421 (504)
T 3ek1_A 344 TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEE 421 (504)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHH
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHH
Confidence 999999999999999999999999999999999999975 368999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 422 eAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~ 501 (504)
T 3ek1_A 422 EVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501 (504)
T ss_dssp HHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred HHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999999877788999999999999999999999999999999887
Q ss_pred C
Q 020284 322 L 322 (328)
Q Consensus 322 ~ 322 (328)
+
T Consensus 502 ~ 502 (504)
T 3ek1_A 502 Y 502 (504)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-79 Score=595.77 Aligned_cols=321 Identities=59% Similarity=1.033 Sum_probs=310.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 255 (501)
T 1bxs_A 176 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997788899999999999999999999999999
Q ss_pred HHHh-hCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a-~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 256 ~~aa~~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (501)
T 1bxs_A 256 EAAGKS-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN 334 (501)
T ss_dssp HHHHHT-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSC
T ss_pred HHhhhc-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCC
Confidence 9998 6 5999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.|+++++||+++..+++|++++|++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 335 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (501)
T 1bxs_A 335 PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414 (501)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence 99999999999999999999999999999999999999764446899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~ 494 (501)
T 1bxs_A 415 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTI 494 (501)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEE
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999988
Q ss_pred eCC
Q 020284 321 ALK 323 (328)
Q Consensus 321 ~~~ 323 (328)
++.
T Consensus 495 ~~~ 497 (501)
T 1bxs_A 495 KIS 497 (501)
T ss_dssp ECS
T ss_pred ccC
Confidence 753
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-80 Score=597.90 Aligned_cols=322 Identities=38% Similarity=0.624 Sum_probs=309.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~ 244 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 245 ~~aa~~-l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 245 KTSAEY-MTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHTTT-TCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhhc-CCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcc--cCC--CCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.|+++++||+++.++++++++++++++++|+++++||.. .+. .|+|+.|||+.++++++.+++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 222 6899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+
T Consensus 404 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~ 483 (497)
T 3k2w_A 404 SSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKT 483 (497)
T ss_dssp SCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEE
Confidence 99999999999999999999999999999999999999999999988878999999999999999999999999999999
Q ss_pred EEEeCCC
Q 020284 318 VVTALKN 324 (328)
Q Consensus 318 i~~~~~~ 324 (328)
|+++...
T Consensus 484 v~~~~~~ 490 (497)
T 3k2w_A 484 VYINEAE 490 (497)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 9998753
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-79 Score=592.67 Aligned_cols=319 Identities=39% Similarity=0.665 Sum_probs=309.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|++++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 162 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~ 241 (481)
T 3jz4_A 162 ITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241 (481)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 242 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 320 (481)
T 3jz4_A 242 EQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDG 320 (481)
T ss_dssp HHHTT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCT
T ss_pred HHHhh-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99988 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||+++..+++++++++++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 321 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 400 (481)
T 3jz4_A 321 LDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEA 400 (481)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHH
T ss_pred ccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHH
Confidence 99999999999999999999999999999999999998655568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+|++.
T Consensus 401 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 401 DVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 99999999999999999999999999999999999999999877789999999999999999999999999999999875
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-80 Score=597.53 Aligned_cols=319 Identities=34% Similarity=0.623 Sum_probs=310.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 256 (498)
T 4f3x_A 178 MAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVL 256 (498)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999999 999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 257 ~~aa~~-~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (498)
T 4f3x_A 257 AAAAKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLD 335 (498)
T ss_dssp HHHHTT-TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCS
T ss_pred HHHHhh-CCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCC-eEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga-~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.|+++++||+++..+++++++++++++++|+ ++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 336 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 415 (498)
T 4f3x_A 336 DDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGK 415 (498)
T ss_dssp SGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTT
T ss_pred ccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCH
Confidence 9999999999999999999999999999999 999999865567999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 416 deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~ 495 (498)
T 4f3x_A 416 DDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMI 495 (498)
T ss_dssp SCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999988778999999999999999999999999999999987
Q ss_pred eC
Q 020284 321 AL 322 (328)
Q Consensus 321 ~~ 322 (328)
++
T Consensus 496 ~~ 497 (498)
T 4f3x_A 496 NH 497 (498)
T ss_dssp EC
T ss_pred eC
Confidence 63
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-79 Score=596.24 Aligned_cols=321 Identities=61% Similarity=1.031 Sum_probs=310.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 175 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 254 (500)
T 1o04_A 175 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 254 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHh-hCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a-~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 255 ~~aa~~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 333 (500)
T 1o04_A 255 VAAGSS-NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333 (500)
T ss_dssp HHHHHT-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCC
T ss_pred Hhhhhh-cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCC
Confidence 9998 6 5999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.|+++++||+++..+++|+++++++++++|+++++||...+..|+|+.|||+.+++++|.+++||+||||++|++|+|+
T Consensus 334 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (500)
T 1o04_A 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413 (500)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCH
Confidence 99999999999999999999999999999999999999764346899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~ 493 (500)
T 1o04_A 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493 (500)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999988
Q ss_pred eCC
Q 020284 321 ALK 323 (328)
Q Consensus 321 ~~~ 323 (328)
+..
T Consensus 494 ~~~ 496 (500)
T 1o04_A 494 KVP 496 (500)
T ss_dssp ECS
T ss_pred ecC
Confidence 753
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-79 Score=591.82 Aligned_cols=315 Identities=39% Similarity=0.649 Sum_probs=303.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~ 257 (497)
T 3i44_A 178 VTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDIS 257 (497)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ +||+++|+|||||+||++||| +.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 258 ~~aa~~-~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (497)
T 3i44_A 258 KNASNT-LKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPG 335 (497)
T ss_dssp HHHHTT-TCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHHhhc-CCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999884 999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCc-ccC--CCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
.|+++++||+++++++++++++|++++++|+++++||. ... ..|+|+.|||+.++++++.+++||+||||++|++|+
T Consensus 336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 415 (497)
T 3i44_A 336 HQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415 (497)
T ss_dssp TSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecC
Confidence 99999999999999999999999999999999999994 322 269999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
|++|||+++|+++|||+++|||+|.++++++++++++|+|+||. ....+.+||||+|.||+|+++|.+++++||+.|+|
T Consensus 416 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v 494 (497)
T 3i44_A 416 TEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494 (497)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEE
Confidence 99999999999999999999999999999999999999999995 55578999999999999999999999999999987
Q ss_pred E
Q 020284 319 V 319 (328)
Q Consensus 319 ~ 319 (328)
+
T Consensus 495 ~ 495 (497)
T 3i44_A 495 S 495 (497)
T ss_dssp S
T ss_pred E
Confidence 5
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-79 Score=593.42 Aligned_cols=318 Identities=40% Similarity=0.673 Sum_probs=307.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++ +.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 241 (495)
T 3b4w_A 163 AVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVG 241 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999999 888999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 242 ~~aa~~-l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 320 (495)
T 3b4w_A 242 RRAAEM-LKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPP 320 (495)
T ss_dssp HHHHHT-TCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCT
T ss_pred HHhhhc-CCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
.|+++++||+++.++++|+++++++++++|+++++||.... ..|+|+.|||+.++++++.+++||+||||++|++|+|
T Consensus 321 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 400 (495)
T 3b4w_A 321 SDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDT 400 (495)
T ss_dssp TCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred ccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCC
Confidence 99999999999999999999999999999999999997543 3689999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
++|||+++|+++|||+++|||+|.++++++++++++|.|+||+++ ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus 401 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~ 479 (495)
T 3b4w_A 401 EEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479 (495)
T ss_dssp HHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEE
Confidence 999999999999999999999999999999999999999999987 7789999999999999999999999999999998
Q ss_pred EeC
Q 020284 320 TAL 322 (328)
Q Consensus 320 ~~~ 322 (328)
+++
T Consensus 480 ~~~ 482 (495)
T 3b4w_A 480 LPM 482 (495)
T ss_dssp CCT
T ss_pred Ecc
Confidence 875
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-78 Score=591.58 Aligned_cols=319 Identities=44% Similarity=0.751 Sum_probs=308.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 179 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~ 258 (515)
T 2d4e_A 179 STWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVM 258 (515)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997678899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 259 ~~aa~~-l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 337 (515)
T 2d4e_A 259 RNAADH-LKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHP 337 (515)
T ss_dssp HHHGGG-TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHHhhc-CCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCc
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--------CCCceecceeeecCCCCCcccCcceecceEE
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 233 (328)
.|+++++||+++.+++++++++|++++++|+++++||.... ..|+|+.|||+.+ +++|.+++||+||||++
T Consensus 338 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~ 416 (515)
T 2d4e_A 338 LDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLV 416 (515)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEE
T ss_pred ccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceE
Confidence 99999999999999999999999999999999999997543 2689999999999 99999999999999999
Q ss_pred eEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 020284 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 313 (328)
Q Consensus 234 v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~ 313 (328)
|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||+++...+.+||||+|.||+|+++|++++++|+
T Consensus 417 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~ 496 (515)
T 2d4e_A 417 AIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYT 496 (515)
T ss_dssp EEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHE
T ss_pred EEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999998777789999999999999999999999999
Q ss_pred hceEEEEeC
Q 020284 314 QVKAVVTAL 322 (328)
Q Consensus 314 ~~k~i~~~~ 322 (328)
+.|+|++++
T Consensus 497 ~~K~v~~~~ 505 (515)
T 2d4e_A 497 DLKTIALPL 505 (515)
T ss_dssp EEEEEEEES
T ss_pred ceeEEEEcC
Confidence 999999875
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-79 Score=589.08 Aligned_cols=319 Identities=36% Similarity=0.632 Sum_probs=307.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 159 IARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997677899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 239 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 317 (479)
T 2imp_A 239 ATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP 317 (479)
T ss_dssp HHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCc
Confidence 99988 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FK-GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~-~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.| +++++||+++..+++|+++++++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 318 ~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~ 397 (479)
T 2imp_A 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL 397 (479)
T ss_dssp TTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSH
T ss_pred cccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCH
Confidence 99 99999999999999999999999999999999999753346899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus 398 ~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~ 477 (479)
T 2imp_A 398 EDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477 (479)
T ss_dssp HHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEe
Confidence 99999999999999999999999999999999999999999987767899999999999999999999999999999987
Q ss_pred e
Q 020284 321 A 321 (328)
Q Consensus 321 ~ 321 (328)
+
T Consensus 478 ~ 478 (479)
T 2imp_A 478 Q 478 (479)
T ss_dssp E
T ss_pred c
Confidence 5
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-79 Score=592.85 Aligned_cols=319 Identities=41% Similarity=0.760 Sum_probs=308.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++ +.++.|++||++|+|+||||+.+|+.|+
T Consensus 172 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 250 (503)
T 1a4s_A 172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVM 250 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999977 8899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 251 ~~aa~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 329 (503)
T 1a4s_A 251 EMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP 329 (503)
T ss_dssp HHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCC
Confidence 99988 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc--C----CCCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
.|+++++||+++.++++|+++++++++++|+++++||... + ..|+|++|||+.+++++|.+++||+||||++|+
T Consensus 330 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 409 (503)
T 1a4s_A 330 LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409 (503)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred cccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEE
Confidence 9999999999999999999999999999999999999754 2 358999999999999999999999999999999
Q ss_pred eecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhc
Q 020284 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 315 (328)
Q Consensus 236 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~ 315 (328)
+|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++++++|++.
T Consensus 410 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~ 489 (503)
T 1a4s_A 410 PFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQL 489 (503)
T ss_dssp EECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEE
T ss_pred ecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999877778999999999999999999999999999
Q ss_pred eEEEEeC
Q 020284 316 KAVVTAL 322 (328)
Q Consensus 316 k~i~~~~ 322 (328)
|+|++++
T Consensus 490 k~v~~~~ 496 (503)
T 1a4s_A 490 KTVIVEM 496 (503)
T ss_dssp EEEEECC
T ss_pred eEEEEcc
Confidence 9998874
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-79 Score=591.17 Aligned_cols=315 Identities=38% Similarity=0.551 Sum_probs=304.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 169 ~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 248 (505)
T 3prl_A 169 AAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 248 (505)
T ss_dssp HHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 249 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 325 (505)
T 3prl_A 249 EKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSP 325 (505)
T ss_dssp HHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCC
Confidence 9875 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
. +++++||+++.++++++++++++++++|+++++||.. .|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 326 ~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~d 401 (505)
T 3prl_A 326 E-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDAN 401 (505)
T ss_dssp T-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred C-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHH
Confidence 9 9999999999999999999999999999999999973 58999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 402 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~ 481 (505)
T 3prl_A 402 EAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVL 481 (505)
T ss_dssp HHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999876 46889999999999999999999999999999998
Q ss_pred eCC
Q 020284 321 ALK 323 (328)
Q Consensus 321 ~~~ 323 (328)
++.
T Consensus 482 ~~~ 484 (505)
T 3prl_A 482 NLA 484 (505)
T ss_dssp EC-
T ss_pred eCC
Confidence 864
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-79 Score=596.22 Aligned_cols=319 Identities=44% Similarity=0.767 Sum_probs=308.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++ +.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 245 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVA 245 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999 788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 246 ~~aa~~-lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 324 (517)
T 3r31_A 246 AAAAGH-LKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDP 324 (517)
T ss_dssp HHHHHT-TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhcC-CCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 999984 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC---CCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
.|+++++||+++.+++++++++|++++++|+++++||...+ ..|+|+.|||+.++++++.+++||+||||++|++|+
T Consensus 325 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (517)
T 3r31_A 325 LDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFD 404 (517)
T ss_dssp TSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEEC
T ss_pred CCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeC
Confidence 99999999999999999999999999999999999993122 368999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
|++|||+++|+++|||+++|||+|.++++++++++++|.|+||+++...+.+||||+|.||+|+++|++++++||+.|+|
T Consensus 405 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v 484 (517)
T 3r31_A 405 DEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484 (517)
T ss_dssp CHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEE
T ss_pred CHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999999887789999999999999999999999999999999
Q ss_pred EEeC
Q 020284 319 VTAL 322 (328)
Q Consensus 319 ~~~~ 322 (328)
+++.
T Consensus 485 ~~~~ 488 (517)
T 3r31_A 485 YVST 488 (517)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9875
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-78 Score=588.24 Aligned_cols=317 Identities=37% Similarity=0.647 Sum_probs=306.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 254 (495)
T 1wnd_A 176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII 254 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999999 999999999997778899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 255 ~~aa~~-l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 333 (495)
T 1wnd_A 255 SHTASS-IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAP 333 (495)
T ss_dssp HHHGGG-TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCT
T ss_pred HHHHhc-CCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCC-CeEeeCCc-ccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~g-a~~~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
.|+++++||+++..+++|+++++++++++| +++++||. .. ..|+|+.|||+.+++++|.+++||+||||++|++|+|
T Consensus 334 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 412 (495)
T 1wnd_A 334 DDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDN 412 (495)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred ccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCC
Confidence 999999999999999999999999999999 99999997 43 2689999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
++|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 413 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~ 492 (495)
T 1wnd_A 413 EEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 492 (495)
T ss_dssp HHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEE
Confidence 99999999999999999999999999999999999999999998777789999999999999999999999999999998
Q ss_pred Ee
Q 020284 320 TA 321 (328)
Q Consensus 320 ~~ 321 (328)
++
T Consensus 493 ~~ 494 (495)
T 1wnd_A 493 VK 494 (495)
T ss_dssp EE
T ss_pred ec
Confidence 75
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-78 Score=589.22 Aligned_cols=323 Identities=35% Similarity=0.576 Sum_probs=292.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~-~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 165 SIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 568999999999999999999999999 9999999999999999999999778899999999999999999999999999
Q ss_pred HHHHhh--CCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhccc
Q 020284 81 LQLAAK--SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 158 (328)
Q Consensus 81 ~~~~a~--~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~ 158 (328)
++.+++ + ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 245 ~~~aa~~~~-l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 245 GELAINGGP-MKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHHSSSS-CCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHhhcccC-CCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 998886 5 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 159 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 159 g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
|+|.++++++||+++.++++++++++++++++|+++++||.. .|+|+.|||+.++++++.+++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999974 58999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
|++||++++|+++|||+++|||+|.+.++++++++++|.|+||+++.. .+.+||||+|.||+|+++|++++++||+.|+
T Consensus 401 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~ 480 (508)
T 3r64_A 401 DEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRW 480 (508)
T ss_dssp SHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999999998754 6889999999999999999999999999999
Q ss_pred EEEeC-----CCCCCC
Q 020284 318 VVTAL-----KNPAWL 328 (328)
Q Consensus 318 i~~~~-----~~~~~~ 328 (328)
|+++. .++.||
T Consensus 481 v~~~~~~~~~~~~~~~ 496 (508)
T 3r64_A 481 IGIKRSAENLYFQSHH 496 (508)
T ss_dssp EEEECCSTTCCCC---
T ss_pred EEEecccchhcchhhc
Confidence 99885 467775
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-78 Score=590.93 Aligned_cols=321 Identities=30% Similarity=0.462 Sum_probs=307.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++ +.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 179 ~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~ 257 (521)
T 4e4g_A 179 PMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVY 257 (521)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCC-CHHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeC-ChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999 456679999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEccc-chHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++ ++|+|+++|+++++++++|+
T Consensus 258 ~~aa~~-lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~ 336 (521)
T 4e4g_A 258 GTAAMN-GKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGP 336 (521)
T ss_dssp HHHHHT-TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCC
T ss_pred HHHhhc-CCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc----CCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
|.|+++++||+++.++++|++++|++++++|+++++||... ...|+|+.|||+.+++++|.+++||+||||++|++
T Consensus 337 ~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 416 (521)
T 4e4g_A 337 YTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVR 416 (521)
T ss_dssp TTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECC
T ss_pred CCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEE
Confidence 99999999999999999999999999999999999999742 24689999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYL 313 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g--~~~g~~~~~~~~ 313 (328)
|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++... .+.+||||+|.||+| +++|++++++||
T Consensus 417 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft 496 (521)
T 4e4g_A 417 ARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWT 496 (521)
T ss_dssp BSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTE
T ss_pred eCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999997654 478999999999999 799999999999
Q ss_pred hceEEEEeCCC
Q 020284 314 QVKAVVTALKN 324 (328)
Q Consensus 314 ~~k~i~~~~~~ 324 (328)
+.|+|++++..
T Consensus 497 ~~K~v~~~~~~ 507 (521)
T 4e4g_A 497 RTKTITSRWPS 507 (521)
T ss_dssp EEEEEEECCCC
T ss_pred eEEEEEEecCc
Confidence 99999988753
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-78 Score=593.61 Aligned_cols=320 Identities=38% Similarity=0.597 Sum_probs=307.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 189 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 268 (538)
T 3qan_A 189 MVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLY 268 (538)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCC-----CCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 82 QLAAKSN-----LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 82 ~~~a~~~-----~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
+.++++. ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++
T Consensus 269 ~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 348 (538)
T 3qan_A 269 ERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNL 348 (538)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTC
T ss_pred HHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhc
Confidence 9988731 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
++|+|.|+++++||+++..++++++++|++++++| ++++||...+..|+|+.|||+.++++++.+++||+||||++|++
T Consensus 349 ~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 427 (538)
T 3qan_A 349 TVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSK 427 (538)
T ss_dssp CBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred cCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEE
Confidence 99999999999999999999999999999999999 99999986544799999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEc-CCCCC-CCCCCccCCCCCCCC-CcchHHHHHhhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN-CFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYL 313 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN-~~~~~-~~~~p~gG~~~SG~g-~~~g~~~~~~~~ 313 (328)
|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+|| ++... .+.+||||+|.||+| +++|++++++||
T Consensus 428 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft 507 (538)
T 3qan_A 428 ANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHM 507 (538)
T ss_dssp ESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGE
T ss_pred eCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 55443 789999999999999 999999999999
Q ss_pred hceEEEEeC
Q 020284 314 QVKAVVTAL 322 (328)
Q Consensus 314 ~~k~i~~~~ 322 (328)
+.|+|+++.
T Consensus 508 ~~k~v~~~~ 516 (538)
T 3qan_A 508 QAKTVSEMY 516 (538)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEec
Confidence 999999885
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-78 Score=583.40 Aligned_cols=319 Identities=32% Similarity=0.506 Sum_probs=309.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|.++.+|++++.++|+|+|++|++++ +.+.+..|++||++|.|+||||+.+|+.|+
T Consensus 143 ~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 221 (462)
T 3etf_A 143 VLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIG 221 (462)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHH
Confidence 5789999999999999999999999999999999999999999999998 567788999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 222 ~~aa~~-~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 300 (462)
T 3etf_A 222 AQAGAA-LKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDP 300 (462)
T ss_dssp HHHHHT-TCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHhcc-CCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCC
Confidence 999984 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..+++++++++++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 301 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~d 380 (462)
T 3etf_A 301 LVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAA 380 (462)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred ccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHH
Confidence 99999999999999999999999999999999999998666679999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 381 eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 381 HALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp HHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEe
Confidence 99999999999999999999999999999999999999999887789999999999999999999999999999999876
Q ss_pred C
Q 020284 322 L 322 (328)
Q Consensus 322 ~ 322 (328)
.
T Consensus 461 r 461 (462)
T 3etf_A 461 R 461 (462)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-78 Score=581.75 Aligned_cols=313 Identities=33% Similarity=0.587 Sum_probs=302.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~a----glp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
.++++++||++||+||+|||+.+|.++..+++++.++ |+|+|++|+|++++.+.++.|++||++|+|+||||+.+|
T Consensus 147 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g 226 (486)
T 3pqa_A 147 SAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVG 226 (486)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHH
Confidence 5789999999999999999999999999999999999 999999999999777889999999999999999999999
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++++
T Consensus 227 ~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 303 (486)
T 3pqa_A 227 ELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLN 303 (486)
T ss_dssp HHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCC
T ss_pred HHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcc
Confidence 99998775 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
+|+|+|+++++||+++.++++++++++++++++|+++++||.. .|+|+.|||+ +++++|.+++||+||||++|++|
T Consensus 304 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~ 379 (486)
T 3pqa_A 304 VGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRT 379 (486)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEE
T ss_pred cCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEE
Confidence 9999999999999999999999999999999999999999974 5899999999 99999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
+| +|||+++|+++|||+++|||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++||+.|
T Consensus 380 ~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k 458 (486)
T 3pqa_A 380 NE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIK 458 (486)
T ss_dssp CH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEE
T ss_pred cH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceE
Confidence 99 9999999999999999999999999999999999999999998653 468999999999999999999999999999
Q ss_pred EEEEeC
Q 020284 317 AVVTAL 322 (328)
Q Consensus 317 ~i~~~~ 322 (328)
+|+++.
T Consensus 459 ~v~~~~ 464 (486)
T 3pqa_A 459 TIIISK 464 (486)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999885
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-78 Score=585.58 Aligned_cols=318 Identities=39% Similarity=0.620 Sum_probs=307.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~---~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
+++++++||++||+||+|||+.+|.++..|+++++++|+|+|++|+|+ +++.+.++.|++||++|+|+||||+.+|+
T Consensus 163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~ 242 (487)
T 2w8n_A 163 ITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK 242 (487)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 568999999999999999999999999999999999999999999999 76677889999999999999999999999
Q ss_pred HHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh-cc
Q 020284 79 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RV 157 (328)
Q Consensus 79 ~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~-~~ 157 (328)
.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++ ++
T Consensus 243 ~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 321 (487)
T 2w8n_A 243 ILLHHAAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLR 321 (487)
T ss_dssp HHHHHHHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcc
Confidence 99999988 49999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCc-eecceeeecCCCCCcccCcceecceEEeEe
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
+|+|.++++++||+++..+++++++++++++++|+++++||... ..|+ |++|||+.++++++.+++||+||||++|++
T Consensus 322 ~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~ 400 (487)
T 2w8n_A 322 VGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIK 400 (487)
T ss_dssp BSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEE
T ss_pred cCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEE
Confidence 99999999999999999999999999999999999999999753 3588 999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++|++.|
T Consensus 401 ~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k 480 (487)
T 2w8n_A 401 FDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELK 480 (487)
T ss_dssp ESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEE
T ss_pred eCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCcc
Confidence 99999999999999999999999999999999999999999999998777788999999999999999999999999999
Q ss_pred EEEEe
Q 020284 317 AVVTA 321 (328)
Q Consensus 317 ~i~~~ 321 (328)
+++++
T Consensus 481 ~v~~~ 485 (487)
T 2w8n_A 481 YVCYG 485 (487)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99875
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-77 Score=582.84 Aligned_cols=314 Identities=32% Similarity=0.509 Sum_probs=304.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++ +.++.|++||++|+|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 568999999999999999999999999999999999999999999999966 8899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9875 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCC-ceecceeeecCC---CCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~ 237 (328)
.|+++++||+++.++++++++++++++++|+++++||.. .| +|+.|||+.+++ ++|.+++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 57 999999999999 99999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCC-CCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~-~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
+|++||++++|+++|||+++|||+|.+.++++++++++|.|+||++ ....+.+||||+|.||+|+++|.+++++|++.|
T Consensus 407 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k 486 (501)
T 1uxt_A 407 KDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYK 486 (501)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCcee
Confidence 9999999999999999999999999999999999999999999997 556789999999999999999999999999999
Q ss_pred EEEEeC
Q 020284 317 AVVTAL 322 (328)
Q Consensus 317 ~i~~~~ 322 (328)
++++++
T Consensus 487 ~v~~~~ 492 (501)
T 1uxt_A 487 TIVFNY 492 (501)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999875
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-77 Score=577.67 Aligned_cols=314 Identities=37% Similarity=0.542 Sum_probs=303.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 239 (475)
T 1euh_A 160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997677899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 240 ~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (475)
T 1euh_A 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316 (475)
T ss_dssp HHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred HhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence 9875 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.| ++++||+++..+++++++++++++++|+++++||.. .|+|++|||+.++++++.+++||+||||++|++|+|++
T Consensus 317 ~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~ 392 (475)
T 1euh_A 317 ED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE 392 (475)
T ss_dssp GG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHH
T ss_pred cc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHH
Confidence 99 999999999999999999999999999999999975 58999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcC-CCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~-~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
||++++|+++|||+++|||+|.++++++++++++|.|+||+ +....+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 393 eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~ 472 (475)
T 1euh_A 393 EAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472 (475)
T ss_dssp HHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEE
Confidence 99999999999999999999999999999999999999998 66567899999999999999999999999999999988
Q ss_pred eC
Q 020284 321 AL 322 (328)
Q Consensus 321 ~~ 322 (328)
++
T Consensus 473 ~~ 474 (475)
T 1euh_A 473 DI 474 (475)
T ss_dssp EC
T ss_pred ec
Confidence 64
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-77 Score=581.20 Aligned_cols=318 Identities=34% Similarity=0.546 Sum_probs=284.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~-~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
.++++++||++||+||+|||+.+|+++ ..|.+++.++|+|+|++|++++++.+.++.|++||++|+|.||||+.+|+.|
T Consensus 160 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i 239 (485)
T 4dng_A 160 SMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239 (485)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence 578999999999999999999999999 9999999999999999999999777789999999999999999999999999
Q ss_pred HHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 81 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 81 ~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
++.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 240 ~~~aa~~-~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 318 (485)
T 4dng_A 240 GEIAGRA-FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGD 318 (485)
T ss_dssp HHHHHHH-TCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHHhhh-ccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 9999885 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.|+++++||+++..+++++++++++++++|+++++||.. .|+|++|||+.++++++.+++||+||||++|++|+|+
T Consensus 319 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 395 (485)
T 4dng_A 319 QTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSD 395 (485)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSH
T ss_pred CCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCH
Confidence 9999999999999999999999999999999999999975 5899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
+|||+++|+++|||+++|||+|.+.++++++++++|.|+||++... .+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 396 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~ 475 (485)
T 4dng_A 396 QEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWIS 475 (485)
T ss_dssp HHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999999998654 789999999999999999999999999999999
Q ss_pred EeCC
Q 020284 320 TALK 323 (328)
Q Consensus 320 ~~~~ 323 (328)
+++.
T Consensus 476 ~~~~ 479 (485)
T 4dng_A 476 IQKQ 479 (485)
T ss_dssp EEC-
T ss_pred EecC
Confidence 8864
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-77 Score=580.02 Aligned_cols=319 Identities=29% Similarity=0.510 Sum_probs=304.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|++ +.+.++.|++||++|+|+||||+.+|
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g 252 (500)
T 2j6l_A 174 YGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVG 252 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHH
T ss_pred HHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHH
Confidence 57899999999999999999999999999888866 46999999999999 78889999999999999999999999
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+.|++.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++++
T Consensus 253 ~~i~~~aa~~-l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 331 (500)
T 2j6l_A 253 KQVGLMVQER-FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIR 331 (500)
T ss_dssp HHHHHHHHHT-TCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhccC-CCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcc
Confidence 9999999884 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
+|+|.|+++++||+++..+++|+++++++++++|+++++||...+..|+|++|||+.++++++.+++||+||||++|++|
T Consensus 332 ~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 411 (500)
T 2j6l_A 332 VGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKF 411 (500)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEE
T ss_pred cCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEee
Confidence 99999999999999999999999999999999999999999764456899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHH--HhcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhh
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQ 314 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g~~~g~~~~~~~~~ 314 (328)
+|++|||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++
T Consensus 412 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~ 491 (500)
T 2j6l_A 412 QNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMR 491 (500)
T ss_dssp CCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEE
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhc
Confidence 999999999999999999999999999999999 779999999998654 35789999999999999999999999999
Q ss_pred ceEEEEeC
Q 020284 315 VKAVVTAL 322 (328)
Q Consensus 315 ~k~i~~~~ 322 (328)
.|++++++
T Consensus 492 ~k~v~~~~ 499 (500)
T 2j6l_A 492 RSTCTINY 499 (500)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEeC
Confidence 99998763
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-77 Score=579.11 Aligned_cols=317 Identities=36% Similarity=0.572 Sum_probs=302.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 190 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~ 269 (516)
T 1uzb_A 190 FTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY 269 (516)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHh------hCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh
Q 020284 82 QLAA------KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 155 (328)
Q Consensus 82 ~~~a------~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 155 (328)
+.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++
T Consensus 270 ~~aa~~~~~~~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 348 (516)
T 1uzb_A 270 EAAGRLAPGQT-WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAER 348 (516)
T ss_dssp HHHTSCCTTCC-SCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTT
T ss_pred HHhhhcccccc-ccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHh
Confidence 9887 5 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 156 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 156 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
+++|+| ++++++||+++..+++++++++++++++| ++++||...+..|+|+.|||+.+++++|.+++||+||||++|+
T Consensus 349 ~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~ 426 (516)
T 1uzb_A 349 LSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426 (516)
T ss_dssp CCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEE
T ss_pred ccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEE
Confidence 999999 99999999999999999999999999999 8999997533468999999999999999999999999999999
Q ss_pred eecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhh
Q 020284 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNY 312 (328)
Q Consensus 236 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g-~~~g~~~~~~~ 312 (328)
+|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+| +++|.+++++|
T Consensus 427 ~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f 506 (516)
T 1uzb_A 427 RVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLF 506 (516)
T ss_dssp EESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTT
T ss_pred EeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHc
Confidence 99999999999999999999999999999999999999999999998644 3578999999999999 57899999999
Q ss_pred hhceEEEEe
Q 020284 313 LQVKAVVTA 321 (328)
Q Consensus 313 ~~~k~i~~~ 321 (328)
++.|+|+++
T Consensus 507 ~~~k~v~~~ 515 (516)
T 1uzb_A 507 LEMKAVAER 515 (516)
T ss_dssp EEEEEEEEE
T ss_pred CCeeEEEec
Confidence 999999875
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-77 Score=576.06 Aligned_cols=323 Identities=32% Similarity=0.488 Sum_probs=308.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++ +.+.+..|++||++|+|.||||+.+|+.|+
T Consensus 158 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~ 236 (486)
T 1t90_A 158 PCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVY 236 (486)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999 567889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCe-eEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~-v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++ +|||++ +|+|+++|+++++++++|+
T Consensus 237 ~~aa~~-~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~ 314 (486)
T 1t90_A 237 KKGSEN-LKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGN 314 (486)
T ss_dssp HHHHHT-TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSC
T ss_pred HHHhcc-CCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCC
Confidence 999884 9999999999999999999999999999999999999999999999 999999 9999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
|.++++++||+++..+++++++++++++++|+++++||...+ ..|+|+.|||+.++++++.+++||+||||++|++|+|
T Consensus 315 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~ 394 (486)
T 1t90_A 315 GLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKN 394 (486)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCC
Confidence 999999999999999999999999999999999999997432 3589999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCC--CcchHHHHHhhhhce
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG--REKGSYSLSNYLQVK 316 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g--~~~g~~~~~~~~~~k 316 (328)
++|||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+| +++|.+|+++|++.|
T Consensus 395 ~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k 474 (486)
T 1t90_A 395 LKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKK 474 (486)
T ss_dssp HHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEE
T ss_pred HHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999998643 3578999999999999 899999999999999
Q ss_pred EEEEeCCCCCC
Q 020284 317 AVVTALKNPAW 327 (328)
Q Consensus 317 ~i~~~~~~~~~ 327 (328)
++++++.++.+
T Consensus 475 ~v~~~~~~~~~ 485 (486)
T 1t90_A 475 VVTARYPAPDF 485 (486)
T ss_dssp EEEEECCCCCC
T ss_pred EEEEecCCCCC
Confidence 99998877654
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-77 Score=579.59 Aligned_cols=317 Identities=41% Similarity=0.726 Sum_probs=282.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|++++++.+.++.|+.||++|+|+||||+.+|+.|+
T Consensus 156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~ 235 (478)
T 3ty7_A 156 TSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIM 235 (478)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--
T ss_pred HHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 236 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 314 (478)
T 3ty7_A 236 EKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNP 314 (478)
T ss_dssp CSTTT-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHHh-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 98888 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC---CCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
.|+++++||+++.++++++++++++++++|+++++||.... ..|+|+.|||+.++++++.+++||+||||++|++|+
T Consensus 315 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 394 (478)
T 3ty7_A 315 REDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN 394 (478)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecC
Confidence 99999999999999999999999999999999999994322 468999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++++++||+.|+|
T Consensus 395 ~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v 473 (478)
T 3ty7_A 395 DLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSI 473 (478)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEE
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEE
Confidence 99999999999999999999999999999999999999999999 55678899999999999999999999999999998
Q ss_pred EE
Q 020284 319 VT 320 (328)
Q Consensus 319 ~~ 320 (328)
+.
T Consensus 474 ~~ 475 (478)
T 3ty7_A 474 AG 475 (478)
T ss_dssp ET
T ss_pred EE
Confidence 73
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-76 Score=569.69 Aligned_cols=323 Identities=31% Similarity=0.466 Sum_probs=307.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++ +.+.+..|+.| +|+|.||||+.+|+.|+
T Consensus 143 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~ 219 (474)
T 4h7n_A 143 SMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVA 219 (474)
T ss_dssp HHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHH
T ss_pred HhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhh
Confidence 5789999999999999999999999999999999999999999999999 67788888876 99999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|.++++++++|+|
T Consensus 220 ~~aa~~-~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 298 (474)
T 4h7n_A 220 ETAARR-FIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYP 298 (474)
T ss_dssp HHHHHH-TCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCS
T ss_pred hhhhcc-cccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCC
Confidence 999985 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.++++++||+++..+++++++++++++++|+++++||...+ ..|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 299 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~ 378 (474)
T 4h7n_A 299 LVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDV 378 (474)
T ss_dssp SGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred cccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCH
Confidence 99999999999999999999999999999999999997543 56899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhceE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKA 317 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g-~~~g~~~~~~~~~~k~ 317 (328)
+|||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+++|++.|+
T Consensus 379 deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~ 458 (474)
T 4h7n_A 379 EEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQA 458 (474)
T ss_dssp HHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEE
T ss_pred HHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEE
Confidence 999999999999999999999999999999999999999998754 3578999999999998 7899999999999999
Q ss_pred EEEeC---CCCCCC
Q 020284 318 VVTAL---KNPAWL 328 (328)
Q Consensus 318 i~~~~---~~~~~~ 328 (328)
|+++. ..|+|+
T Consensus 459 v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 459 FLIKTNSTSDPWWF 472 (474)
T ss_dssp EEEECSSSCCTTSC
T ss_pred EEECCCCCCCCCCc
Confidence 99985 467786
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-76 Score=575.22 Aligned_cols=319 Identities=29% Similarity=0.449 Sum_probs=304.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
..++++||| +||+||||||+.+|+++..|+++|+++|+|+|+||+|++++.+.++.|++||++++|.||||+.+|+.|+
T Consensus 217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~ 295 (563)
T 4e3x_A 217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLW 295 (563)
T ss_dssp HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 468999999 5999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCCc------ceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh
Q 020284 82 QLAAKSNLKP------VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 155 (328)
Q Consensus 82 ~~~a~~~~~~------~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 155 (328)
+.++++ ++| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++
T Consensus 296 ~~aa~~-lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~ 374 (563)
T 4e3x_A 296 RQVAQN-LDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSR 374 (563)
T ss_dssp HHHHHT-TTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred HHHHhh-CCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHh
Confidence 999884 774 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC-CCCCccccccCCHHHHHHHHHHHHHHHh-CCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEE
Q 020284 156 RVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233 (328)
Q Consensus 156 ~~~g~~-~~~~~~~gpl~~~~~~~~~~~~l~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 233 (328)
+++|+| .|+++++||++++.++++++++|+++++ +|+++++||...+..|+|++|||+.++++++.+++||+||||++
T Consensus 375 l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~ 454 (563)
T 4e3x_A 375 IKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLT 454 (563)
T ss_dssp CCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEE
T ss_pred ccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEE
Confidence 999999 9999999999999999999999999996 89999999987666799999999999999999999999999999
Q ss_pred eEeecC--hhHHHHHh-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCCCCC--CCCCCccCCCCCCCC-Ccch
Q 020284 234 ILKYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVF--DAAIPFGGYKQSGQG-REKG 305 (328)
Q Consensus 234 v~~~~~--~~eai~~~-n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g 305 (328)
|++|+| ++|||+++ |+++|||+++|||+|.+.+++++++++ +|+||||++++. .+.+||||+|.||+| +.+|
T Consensus 455 V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G 534 (563)
T 4e3x_A 455 VYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 534 (563)
T ss_dssp EEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTS
T ss_pred EEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCC
Confidence 999996 79999999 789999999999999999999999976 999999997643 578999999999998 8999
Q ss_pred HHHHHhhhhceEEEEeC
Q 020284 306 SYSLSNYLQVKAVVTAL 322 (328)
Q Consensus 306 ~~~~~~~~~~k~i~~~~ 322 (328)
++++++|++.|+|..+.
T Consensus 535 ~~~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 535 PHYILRWTSPQVIKETH 551 (563)
T ss_dssp TTGGGGGBCCEEEEEEC
T ss_pred HHHHHHhCceEEEEEeC
Confidence 99999999999999886
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-76 Score=565.00 Aligned_cols=310 Identities=31% Similarity=0.463 Sum_probs=294.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..|++++.++ +|+|++|++++ +.+.+..|+.| ++|+|+||||+.+|+.|+
T Consensus 137 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~ 213 (469)
T 3sza_A 137 TIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVING-GVPETTELLKE-RFDHILYTGSTGVGKIIM 213 (469)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCC-SHHHHHHHTTS-CCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEEC-CHHHHHHHHhc-CCCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999998 99999999999 44555677777 799999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++ +|+|
T Consensus 214 ~~aa~~-lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~ 291 (469)
T 3sza_A 214 TAAAKH-LTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGED 291 (469)
T ss_dssp HHHHTT-TCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSC
T ss_pred HHHhhc-cCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCC
Confidence 999884 99999999999999999999999999999999999999999999999999999999999999999998 6999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++.++++|+++++ +|+++++||... ..|+|+.|||+.+++++|.+++||+||||++|++|+|++
T Consensus 292 ~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 365 (469)
T 3sza_A 292 AKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLE 365 (469)
T ss_dssp GGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHH
T ss_pred CcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHH
Confidence 99999999999999999999998 589999999864 468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 366 eAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~ 445 (469)
T 3sza_A 366 EAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCL 445 (469)
T ss_dssp HHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEE
T ss_pred HHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEE
Confidence 99999999999999999999999999999999999999999753 4689999999999999999999999999999998
Q ss_pred EeC
Q 020284 320 TAL 322 (328)
Q Consensus 320 ~~~ 322 (328)
++.
T Consensus 446 ~~~ 448 (469)
T 3sza_A 446 VRP 448 (469)
T ss_dssp ECC
T ss_pred ECC
Confidence 874
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-73 Score=547.88 Aligned_cols=307 Identities=29% Similarity=0.488 Sum_probs=291.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+|++ +.+.+..|++ +++|+|+||||+.+|+.|+
T Consensus 147 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~ 223 (457)
T 3lns_A 147 TLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVM 223 (457)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999999 99999999999 7788899998 7899999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++++ |
T Consensus 224 ~~aa~~-l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p 299 (457)
T 3lns_A 224 QAAAKH-LTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---P 299 (457)
T ss_dssp HHHHTT-TCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---C
T ss_pred HHHhhc-cCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---C
Confidence 999884 999999999999999999999999999999999999999999999999999999999999999999988 6
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++ ++||+++.++++|++++++++. +++++||... ..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 300 ~~~--~~gpli~~~~~~rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 373 (457)
T 3lns_A 300 EIN--STGKLVTERQVQRLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVR 373 (457)
T ss_dssp STT--TTCCCSSHHHHHHHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHH
T ss_pred Ccc--cccCCCCHHHHHHHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHH
Confidence 666 9999999999999999999853 5899999753 368999999999999999999999999999999999999
Q ss_pred HHHHHhhc-CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 242 EVIQRSNA-SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 242 eai~~~n~-~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
|||+++|+ ++|||+++|||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|
T Consensus 374 eAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v 453 (457)
T 3lns_A 374 TAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453 (457)
T ss_dssp HHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEE
Confidence 99999999 999999999999999999999999999999999753 478999999999999999999999999999998
Q ss_pred EEe
Q 020284 319 VTA 321 (328)
Q Consensus 319 ~~~ 321 (328)
++.
T Consensus 454 ~~~ 456 (457)
T 3lns_A 454 RIV 456 (457)
T ss_dssp EEC
T ss_pred EeC
Confidence 764
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-73 Score=586.17 Aligned_cols=320 Identities=33% Similarity=0.543 Sum_probs=305.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|++||++++|+||||+.+|+.|+
T Consensus 683 ~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~ 762 (1026)
T 4f9i_A 683 SMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRII 762 (1026)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhh-----CCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 82 QLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 82 ~~~a~-----~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
+.+++ .+++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++
T Consensus 763 ~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l 842 (1026)
T 4f9i_A 763 ERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKAT 842 (1026)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHC
T ss_pred HHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhc
Confidence 98873 2479999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
++|+|.|+++++||+++..++++++++|++++++| ++++||...+..|+|+.|||+.++++++.+++||+||||++|++
T Consensus 843 ~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 921 (1026)
T 4f9i_A 843 KVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMR 921 (1026)
T ss_dssp CBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEE
T ss_pred ccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEE
Confidence 99999999999999999999999999999999998 99999975444599999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYL 313 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~~~~~~~~ 313 (328)
|+|++|||+++|+++|||+++|||+|.+.++++++++++|+||||+.++. .+.+||||+|.||+| +.+|++++++|+
T Consensus 922 ~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~ 1001 (1026)
T 4f9i_A 922 AKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFM 1001 (1026)
T ss_dssp ESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGE
T ss_pred eCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhc
Confidence 99999999999999999999999999999999999999999999997653 478999999999999 568999999999
Q ss_pred hceEEEEeC
Q 020284 314 QVKAVVTAL 322 (328)
Q Consensus 314 ~~k~i~~~~ 322 (328)
+.|+|+++.
T Consensus 1002 ~~k~v~~~~ 1010 (1026)
T 4f9i_A 1002 DPRVVTENT 1010 (1026)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 999999885
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-73 Score=551.00 Aligned_cols=312 Identities=30% Similarity=0.428 Sum_probs=298.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|++++ +.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 234 (490)
T 3ju8_A 156 PNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLH 234 (490)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999 678899999999999999999999999999
Q ss_pred HHHhhCCCCcc-eeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccc-hHHHHHHHHHHHhhcccC
Q 020284 82 QLAAKSNLKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVG 159 (328)
Q Consensus 82 ~~~a~~~~~~~-~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~l~~~~~~~~~g 159 (328)
+.++++ ++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++ +|+|+++|+++++++++|
T Consensus 235 ~~aa~~-~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G 313 (490)
T 3ju8_A 235 SQFGGQ-PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVG 313 (490)
T ss_dssp HHTTTC-TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBC
T ss_pred HHhhcc-CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCC
Confidence 998884 8998 7999999999999999999999999999999999999999999999996 999999999999999999
Q ss_pred C-CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 160 D-PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 160 ~-~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
+ |.|+++++||+++.++++++++++++++++|+++++||...+..|+|+.|||+. +++++.+++||+||||++|++|+
T Consensus 314 ~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~ 392 (490)
T 3ju8_A 314 RFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYS 392 (490)
T ss_dssp CTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEES
T ss_pred CCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeC
Confidence 9 999999999999999999999999999999999999998666679999999999 99999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
|++||++++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||.+ ++++|++.|+
T Consensus 393 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~ 466 (490)
T 3ju8_A 393 DFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADY 466 (490)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHH
T ss_pred CHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEE
Confidence 99999999999999999999999999999999999999999999765 4588999999999974 5899999999
Q ss_pred EEEeC
Q 020284 318 VVTAL 322 (328)
Q Consensus 318 i~~~~ 322 (328)
++++.
T Consensus 467 v~~~~ 471 (490)
T 3ju8_A 467 CAYPV 471 (490)
T ss_dssp HEEEE
T ss_pred EEEec
Confidence 88774
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-73 Score=553.14 Aligned_cols=315 Identities=26% Similarity=0.355 Sum_probs=291.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~ag-lp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|++++.+++..| +++|+|+||||+.+|+.|
T Consensus 168 ~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~~i 244 (534)
T 2y53_A 168 LWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAATL 244 (534)
T ss_dssp HHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHHHH
Confidence 56899999999999999999999999999999999999 89999999998544333222 579999999999999999
Q ss_pred HHHHh--hCCCCcceeccCCCCceecCCCC-----CHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHH
Q 020284 81 LQLAA--KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 153 (328)
Q Consensus 81 ~~~~a--~~~~~~~~~e~gG~~~~iV~~da-----d~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 153 (328)
++.++ + ++||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++
T Consensus 245 ~~~aa~a~-~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 323 (534)
T 2y53_A 245 RAHPAFVQ-RGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKL 323 (534)
T ss_dssp HTSHHHHT-TCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHhhhhhc-CCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHHH
Confidence 98764 5 599999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC------CCCceecceeeecCCCC--CcccCc
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDD--MLIAKD 225 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~------~~g~~~~Ptvl~~~~~~--~~~~~~ 225 (328)
+++++|+|.|+++++||++++.++++++++|+++ .+|+++++||.... ..|+|+.|||+.+++++ +.+++|
T Consensus 324 ~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~e 402 (534)
T 2y53_A 324 AKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDV 402 (534)
T ss_dssp TTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTC
T ss_pred HhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhC
Confidence 9999999999999999999999999999999999 68999999986421 35899999999999877 589999
Q ss_pred ceecceEEeEeec---Ch-----hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc--ceeEEEEcCCCC---------C
Q 020284 226 EIFGPVQSILKYK---DL-----DEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV---------F 286 (328)
Q Consensus 226 E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~---------~ 286 (328)
|+||||++|++|+ |+ +|||+++|+++|||+++|||+|.++++++++++ ++|+|+||++.. .
T Consensus 403 EiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~ 482 (534)
T 2y53_A 403 EVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNV 482 (534)
T ss_dssp CCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCC
T ss_pred CCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCC
Confidence 9999999999999 99 999999999999999999999999999999999 899999998642 3
Q ss_pred CCCCCccCCCCCCCCCc-chHHHHHhhhhceEEEEe
Q 020284 287 DAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 287 ~~~~p~gG~~~SG~g~~-~g~~~~~~~~~~k~i~~~ 321 (328)
.+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 483 ~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 483 MPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp CTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred CCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 57899999999999999 699999999999998764
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-71 Score=566.01 Aligned_cols=315 Identities=30% Similarity=0.465 Sum_probs=297.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+|+|++.+ +..|++||+||+|+||||+.+|+.|+
T Consensus 666 ~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~ 744 (1001)
T 3haz_A 666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSIN 744 (1001)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997777 99999999999999999999999999
Q ss_pred HHHhhC--CCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccC
Q 020284 82 QLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 159 (328)
Q Consensus 82 ~~~a~~--~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g 159 (328)
+.++++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 745 ~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vG 824 (1001)
T 3haz_A 745 RALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIG 824 (1001)
T ss_dssp HHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCC
Confidence 988863 479999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
+|.++++++||+++..++++++++|++++++| ++ +||... ..|+|+.|||+.+ +++.+++||+||||++|++|++
T Consensus 825 dp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~ 899 (1001)
T 3haz_A 825 DPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRP 899 (1001)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECG
T ss_pred CcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCC
Confidence 99999999999999999999999999999888 77 888643 4599999999974 6788999999999999999996
Q ss_pred --hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhh
Q 020284 240 --LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQ 314 (328)
Q Consensus 240 --~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~~~~~~~~~ 314 (328)
++|||+++|+++|||+++|||+|.+.++++++++++|+||||++... .+.+||||+|.||+| +.+|++++++|++
T Consensus 900 ~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~ 979 (1001)
T 3haz_A 900 ENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFAT 979 (1001)
T ss_dssp GGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEE
T ss_pred CCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhce
Confidence 79999999999999999999999999999999999999999997653 467899999999999 5789999999999
Q ss_pred ceEEEEeC
Q 020284 315 VKAVVTAL 322 (328)
Q Consensus 315 ~k~i~~~~ 322 (328)
.|+|+++.
T Consensus 980 ~K~v~~~~ 987 (1001)
T 3haz_A 980 EQTVTINT 987 (1001)
T ss_dssp EEEEEEEC
T ss_pred eeEEEECC
Confidence 99999875
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-68 Score=522.72 Aligned_cols=307 Identities=23% Similarity=0.324 Sum_probs=282.8
Q ss_pred hhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 3 ~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l----~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
.+++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+
T Consensus 189 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~ 268 (528)
T 3v4c_A 189 GGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGR 268 (528)
T ss_dssp SHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred hhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHH
Confidence 389999999999999999999999999999875 4689999999999998778999999999999999999999999
Q ss_pred HHHHHHhhCCC--CcceeccCCCCceecCCCC---CHHHHHHHHHHHHHhhcCCCccCCCeeEEccc-chHHHHHHHHHH
Q 020284 79 IVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANAL 152 (328)
Q Consensus 79 ~v~~~~a~~~~--~~~~~e~gG~~~~iV~~da---d~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~ 152 (328)
.|++.++++ + +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++++|||++ ++|+|+++|+++
T Consensus 269 ~i~~~aa~~-~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~ 347 (528)
T 3v4c_A 269 ALFDLCAAR-PEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEA 347 (528)
T ss_dssp HHHHHHHHS-SSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHhhc-cCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHH
Confidence 999999884 7 8999999999999999999 88999999999999999999999999999997 999999999999
Q ss_pred HhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCC---CcccCcceec
Q 020284 153 AMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFG 229 (328)
Q Consensus 153 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fg 229 (328)
++++++| +.+||+++..+.++++++++ ++|+++++||.. .|+|+.|||+.+++++ +.+++||+||
T Consensus 348 ~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~i~~eEiFG 415 (528)
T 3v4c_A 348 LAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEEVFG 415 (528)
T ss_dssp HHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHCGGGGCCCSS
T ss_pred HHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccChhhcccccC
Confidence 9988654 57899998888888777763 479999999974 6899999999988777 8999999999
Q ss_pred ceEEeEeecChhHHHHHhhcCCCCceEEEecC--CHHHHHHHHHhcc--eeEEEEcCCCC---CCCCCCccC-CCCCCCC
Q 020284 230 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGSVWINCFDV---FDAAIPFGG-YKQSGQG 301 (328)
Q Consensus 230 Pvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~--d~~~~~~~~~~l~--~g~v~iN~~~~---~~~~~p~gG-~~~SG~g 301 (328)
||++|++|+|++|||+++|+++|||+++|||+ |.+++++++++++ +|+||||++++ ..+.+|||| +|.||+|
T Consensus 416 PVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~g 495 (528)
T 3v4c_A 416 PLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNF 495 (528)
T ss_dssp SEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCT
T ss_pred CeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999 8899999999998 99999999765 358999999 9999999
Q ss_pred Ccc--hHHHHHhhhhceEEEEeCC
Q 020284 302 REK--GSYSLSNYLQVKAVVTALK 323 (328)
Q Consensus 302 ~~~--g~~~~~~~~~~k~i~~~~~ 323 (328)
+++ |++|+++|+++|++ .+.+
T Consensus 496 r~~~~G~~gl~~~~~~k~~-q~~p 518 (528)
T 3v4c_A 496 GATSVGTMSIRRFLRPVAY-QNMP 518 (528)
T ss_dssp TCCSSSGGGGGGGEEEEEE-ESCC
T ss_pred CCCCCcHHHHHHhchhHHh-hcCC
Confidence 986 99999999999875 4443
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-68 Score=516.46 Aligned_cols=302 Identities=21% Similarity=0.313 Sum_probs=280.8
Q ss_pred hhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 3 ~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l----~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
++++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|++.+.+.++.|++||++|+|+||||+.+|+
T Consensus 156 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~ 235 (510)
T 1ez0_A 156 GGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGR 235 (510)
T ss_dssp SHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHH
Confidence 489999999999999999999999999999988 5679999999999997778899999999999999999999999
Q ss_pred HHHHHHhhCCC--CcceeccCCCCceecCCCCCHH--HHHHHHHHHHHhhcCCCccCCCeeEEccc-chHHHHHHHHHHH
Q 020284 79 IVLQLAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALA 153 (328)
Q Consensus 79 ~v~~~~a~~~~--~~~~~e~gG~~~~iV~~dad~~--~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~ 153 (328)
.|++.++++ + +|+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++++|||++ ++|+|+++|++++
T Consensus 236 ~i~~~aa~~-l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~ 314 (510)
T 1ez0_A 236 ALFNLAHER-PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLI 314 (510)
T ss_dssp HHHHHHHHS-SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHhhcc-CCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHH
Confidence 999999884 5 9999999999999999999999 99999999999999999999999999999 9999999999999
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHh-CCCeEeeCCcccCCCCceecceeeecCCCC---CcccCcceec
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFG 229 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fg 229 (328)
+++++ ||++++.+.+++.++++++++ +|+++++||. .|+|+.|||+.+++++ +.+++||+||
T Consensus 315 ~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFG 380 (510)
T 1ez0_A 315 RQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFG 380 (510)
T ss_dssp HHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCS
T ss_pred HhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccC
Confidence 98864 588889999999999999984 7999999997 2899999999887777 9999999999
Q ss_pred ceEEeEeecChhHHHHHhhcCCCCceEEEecCCH--HHHHHHHHhc--ceeEEEEcCCCC---CCCCCCccC-CCCCCCC
Q 020284 230 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL--DTANTLMRAL--RVGSVWINCFDV---FDAAIPFGG-YKQSGQG 301 (328)
Q Consensus 230 Pvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~--~~~~~~~~~l--~~g~v~iN~~~~---~~~~~p~gG-~~~SG~g 301 (328)
||++|++|+|++||++++|+++|||+++|||+|. ++++++++++ ++|.|+||++.. ..+.+|||| +|.||+|
T Consensus 381 PVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g 460 (510)
T 1ez0_A 381 PQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHS 460 (510)
T ss_dssp SEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCS
T ss_pred CeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCC
Confidence 9999999999999999999999999999999987 7999999999 799999998764 357899999 7999987
Q ss_pred Cc--chHHHHHhhhhceEEE
Q 020284 302 RE--KGSYSLSNYLQVKAVV 319 (328)
Q Consensus 302 ~~--~g~~~~~~~~~~k~i~ 319 (328)
+. +|.+++++|++.|++.
T Consensus 461 ~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 461 ASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SCCSSSGGGGGGGEEEEEEE
T ss_pred CCCCccHHHHHHhheEEEEc
Confidence 54 7999999999988764
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-65 Score=490.66 Aligned_cols=283 Identities=17% Similarity=0.175 Sum_probs=228.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----H----cCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCC
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 73 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~----aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs 73 (328)
+++++++||++||+||+|||+.+|+++..+++++. + +|+|+|++|+|+ ++.+.++.|.+||++|+|+||||
T Consensus 141 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS 219 (468)
T 1vlu_A 141 IANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGS 219 (468)
T ss_dssp HHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESC
T ss_pred HHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECC
Confidence 57899999999999999999999999999999995 8 999999999999 66678899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHH
Q 020284 74 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 153 (328)
Q Consensus 74 ~~~~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 153 (328)
+.+|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++++|||+++ |+|+++|.+++
T Consensus 220 ~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~ 293 (468)
T 1vlu_A 220 NALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLT 293 (468)
T ss_dssp HHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHH
T ss_pred HHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHH
Confidence 99999998765 69999999999999999999999999999999999999 99999999999999 99999999999
Q ss_pred hhccc---CCCCCCCccccccCCHHHHHHHHHH-HHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceec
Q 020284 154 MKRVV---GDPFKGGIQQGPQIDSEQFEKILKY-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFG 229 (328)
Q Consensus 154 ~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~-l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 229 (328)
+++++ |+|.+ +++ +++++ ++++||. | +.||++ +++++.+++||+||
T Consensus 294 ~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFG 343 (468)
T 1vlu_A 294 LEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLS 343 (468)
T ss_dssp HHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------C
T ss_pred HhcCCeecCCHHH-----------------hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccC
Confidence 99987 77632 344 55554 3566775 4 789997 68899999999999
Q ss_pred ceEEeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCcc-----CCCCCCCCCcc
Q 020284 230 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFG-----GYKQSGQGREK 304 (328)
Q Consensus 230 Pvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~g-----G~~~SG~g~~~ 304 (328)
||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||| |+|.||+|++
T Consensus 344 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~- 422 (468)
T 1vlu_A 344 LDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR- 422 (468)
T ss_dssp CCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC---------------------
T ss_pred ceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999987777889999 9999999999
Q ss_pred hHHHHHhhhhceEEEEeC
Q 020284 305 GSYSLSNYLQVKAVVTAL 322 (328)
Q Consensus 305 g~~~~~~~~~~k~i~~~~ 322 (328)
|++++++|++.|+++++.
T Consensus 423 G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 423 GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp --CCSGGGEEEEEEEECS
T ss_pred cchHHHHhcceEEEEECC
Confidence 999999999999998764
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-64 Score=482.49 Aligned_cols=300 Identities=15% Similarity=0.212 Sum_probs=273.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHH----HHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVS----KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~----~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|.++..++ +++.++|+|+|++++|++++.+.++.|++||++|+|+||||+.+
T Consensus 125 ~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v- 203 (464)
T 3k9d_A 125 VIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM- 203 (464)
T ss_dssp HHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH-
T ss_pred HHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH-
Confidence 4789999999999999999999999999865 45688999999999999987889999999999999999999985
Q ss_pred HHHHHHHhhCCCCcceeccC-CCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHH---
Q 020284 78 KIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA--- 153 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~g-G~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~--- 153 (328)
.+.+++ +++|+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|.+++++|||++++|+|+++|+++.
T Consensus 204 ---~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 278 (464)
T 3k9d_A 204 ---VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHF 278 (464)
T ss_dssp ---HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEE
T ss_pred ---HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhh
Confidence 444555 58999 7887 99999999999999999999999999999999999999999999999999999985
Q ss_pred ----hhcccCCCC-CCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCccee
Q 020284 154 ----MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIF 228 (328)
Q Consensus 154 ----~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 228 (328)
+.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||.. ++++++++ .+|+|
T Consensus 279 ~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~v~~~~~~-~~E~f 343 (464)
T 3k9d_A 279 LSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------KVGAKIPY-SREKL 343 (464)
T ss_dssp CCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------CCSTTCGG-GSCCC
T ss_pred cChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------CCCCCCcc-ccccc
Confidence 467889887 77899999999999999999999988899999998862 35667775 48999
Q ss_pred cceEEeEeecChhHHH----HHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC---------CCCCCCccCC
Q 020284 229 GPVQSILKYKDLDEVI----QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV---------FDAAIPFGGY 295 (328)
Q Consensus 229 gPvl~v~~~~~~~eai----~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~---------~~~~~p~gG~ 295 (328)
|||++|++|+|++||| +++|.++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||
T Consensus 344 gPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~- 422 (464)
T 3k9d_A 344 APILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC- 422 (464)
T ss_dssp SSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-
Confidence 9999999999999997 79999999999999999999999999999999999999764 468999998
Q ss_pred CCCCCCCcchHHHHHhhhhceEEEEeCC
Q 020284 296 KQSGQGREKGSYSLSNYLQVKAVVTALK 323 (328)
Q Consensus 296 ~~SG~g~~~g~~~~~~~~~~k~i~~~~~ 323 (328)
+.+|.|.++|..++++|++.|++....+
T Consensus 423 G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 423 GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 7789999999999999999999987754
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-63 Score=473.42 Aligned_cols=274 Identities=21% Similarity=0.217 Sum_probs=248.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCC-chhHHHHhhhcCCcCeEEEeCCHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTT 76 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~-~~~~~~~l~~~~~v~~v~ftGs~~~ 76 (328)
+++++++||++||+||+|||+.+|+++..|++++. ++|+|+|++|+|++. .++.++.|..||++|+|+||||+.+
T Consensus 140 ~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~ 219 (427)
T 1o20_A 140 TVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGL 219 (427)
T ss_dssp HHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHH
T ss_pred HHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHH
Confidence 57899999999999999999999999999999998 679999999999984 4567888999999999999999999
Q ss_pred HHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 77 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 77 ~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++++|||++++|+|+++|+++++++
T Consensus 220 G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 294 (427)
T 1o20_A 220 ISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKH 294 (427)
T ss_dssp HHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHc
Confidence 99998876 58999999999999999999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
+++ +.||... .+ |+ ||| +++++.+++||+||||++|++
T Consensus 295 ~~~-----------------------------------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~ 332 (427)
T 1o20_A 295 GVE-----------------------------------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKV 332 (427)
T ss_dssp TCE-----------------------------------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEE
T ss_pred CCe-----------------------------------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEE
Confidence 652 1223211 12 33 886 245788999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNY 312 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g----~~~g~~~~~~~ 312 (328)
|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||.|.||+| +++|++++++|
T Consensus 333 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~ 412 (427)
T 1o20_A 333 VKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLREL 412 (427)
T ss_dssp ESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGG
T ss_pred ECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHH
Confidence 99999999999999999999999999999999999999999999997777788999999999987 46799999999
Q ss_pred hhceEEEEeC
Q 020284 313 LQVKAVVTAL 322 (328)
Q Consensus 313 ~~~k~i~~~~ 322 (328)
++.|+|++++
T Consensus 413 ~~~k~v~~~~ 422 (427)
T 1o20_A 413 TTYKFVVLGE 422 (427)
T ss_dssp EEEEEEEECS
T ss_pred hceEEEEECC
Confidence 9999998774
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-63 Score=474.41 Aligned_cols=276 Identities=21% Similarity=0.228 Sum_probs=239.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCch-hHHHHhhhcCCcCeEEEeCCHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTT 76 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l----~~aglp~g~v~~v~~~~~-~~~~~l~~~~~v~~v~ftGs~~~ 76 (328)
+++++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|++++. +.++.|..||++|+|+||||+.+
T Consensus 152 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~v 231 (444)
T 4ghk_A 152 TIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSL 231 (444)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHH
Confidence 5789999999999999999999999999999997 789999999999998554 57788889999999999999999
Q ss_pred HHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 77 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 77 ~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
++.+++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++++|||++++|+|+++|+++++++
T Consensus 232 g~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 306 (444)
T 4ghk_A 232 IERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREK 306 (444)
T ss_dssp HHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHc
Confidence 99998764 68999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred cc---CCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEE
Q 020284 157 VV---GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233 (328)
Q Consensus 157 ~~---g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 233 (328)
++ |+|. ..++++++. . | ++ +++++.+++||+||||++
T Consensus 307 ~~~~~g~p~-----------------~~~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~ 346 (444)
T 4ghk_A 307 GVELRVDAD-----------------ARAVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLA 346 (444)
T ss_dssp TCEEEECHH-----------------HHHHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEE
T ss_pred CCeecCCHH-----------------HHHHHHhcc-c--------------C------cc--cCCCchhhhccccCceEE
Confidence 88 6542 135565542 1 2 22 356789999999999999
Q ss_pred eEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHH
Q 020284 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSL 309 (328)
Q Consensus 234 v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g----~~~g~~~~ 309 (328)
|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||+++...+..||||.|.||+| +++|++++
T Consensus 347 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl 426 (444)
T 4ghk_A 347 IKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGL 426 (444)
T ss_dssp EEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECG
T ss_pred EEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHH
Confidence 99999999999999999999999999999999999999999999999998877889999999999988 67899999
Q ss_pred HhhhhceEEEEeC
Q 020284 310 SNYLQVKAVVTAL 322 (328)
Q Consensus 310 ~~~~~~k~i~~~~ 322 (328)
++||+.|+|+++.
T Consensus 427 ~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 427 EGLTSLKYVVLGH 439 (444)
T ss_dssp GGGEEEEEEEEEE
T ss_pred HhhceEEEEEECC
Confidence 9999999998764
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-63 Score=474.18 Aligned_cols=271 Identities=18% Similarity=0.184 Sum_probs=235.7
Q ss_pred hhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHH
Q 020284 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 79 (328)
Q Consensus 4 ~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~a----glp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 79 (328)
+++++||++||+||+|||+.+|+++..|++++.++ | |+|++|+|++ +.+.++.|++||++|+|+||||+.+|+.
T Consensus 157 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 234 (463)
T 2h5g_A 157 QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRD 234 (463)
T ss_dssp HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 68999999999999999999999999999999999 8 9999999999 7778899999999999999999999999
Q ss_pred HHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccC
Q 020284 80 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 159 (328)
Q Consensus 80 v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g 159 (328)
|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++++++|||++++|
T Consensus 235 i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d---------------- 294 (463)
T 2h5g_A 235 IQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR---------------- 294 (463)
T ss_dssp HHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT----------------
T ss_pred HHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc----------------
Confidence 999875 699999999999999999999999999999999999 999999999999999998
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
||+ ++ +++++++++|++++.|+.. ...++|+ ++++.+++||+||||++|++|+|
T Consensus 295 ---------~p~-----~~---~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~ 348 (463)
T 2h5g_A 295 ---------TPL-----FD---QIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDN 348 (463)
T ss_dssp ---------SHH-----HH---HHHHHHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEESS
T ss_pred ---------hHH-----HH---HHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeCC
Confidence 232 23 3477778899999855432 2234442 57899999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCC--Cc--chHHHHHhhhhc
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNYLQV 315 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g--~~--~g~~~~~~~~~~ 315 (328)
++|||+++|++++||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+| ++ +|++++++|++.
T Consensus 349 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~ 428 (463)
T 2h5g_A 349 VQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTT 428 (463)
T ss_dssp HHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEE
T ss_pred HHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhcee
Confidence 99999999999999999999999999999999999999999998777789999999999999 65 899999999999
Q ss_pred eEEEEeC
Q 020284 316 KAVVTAL 322 (328)
Q Consensus 316 k~i~~~~ 322 (328)
|+|+++.
T Consensus 429 K~v~~~~ 435 (463)
T 2h5g_A 429 KWLLRGK 435 (463)
T ss_dssp EEEEECS
T ss_pred EEEEECC
Confidence 9998774
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-60 Score=454.49 Aligned_cols=301 Identities=18% Similarity=0.250 Sum_probs=249.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|.++..+++++. ++|+|+|++|+|++++.+.++.|++||++|+|+||||+.++
T Consensus 120 ~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~ 199 (452)
T 3my7_A 120 AIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV 199 (452)
T ss_dssp HHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH
T ss_pred HHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH
Confidence 56899999999999999999999999998888765 78999999999999888899999999999999999999865
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+ .++. +++|+++|+|||+|+||++|||++.|++.+++++|+++||.|.+++++|||++++|+|+++|+++
T Consensus 200 ~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~----- 269 (452)
T 3my7_A 200 K----AAYS-SGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH----- 269 (452)
T ss_dssp H----HHHT-SSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT-----
T ss_pred H----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh-----
Confidence 4 3444 58999999999999999999999999999999999999999999999999999999999999873
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc---CCCCceeccee-------eecCCCCCcccCcce
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTV-------FTGVKDDMLIAKDEI 227 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~---~~~g~~~~Ptv-------l~~~~~~~~~~~~E~ 227 (328)
+||+++++++++++++++++...|+++ +||... ...|+|++||+ +.++++++.+.+ |+
T Consensus 270 ----------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~ 337 (452)
T 3my7_A 270 ----------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EK 337 (452)
T ss_dssp ----------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CC
T ss_pred ----------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-Cc
Confidence 599999999999999998766667776 466532 13589999997 667888888776 89
Q ss_pred ecceEEeEeecChhHHHHHhhcCC----CCceEEEecCCHHHHHH---HHHhcceeEEEEcCCCCC-----------CCC
Q 020284 228 FGPVQSILKYKDLDEVIQRSNASQ----YGLAAGVFTHNLDTANT---LMRALRVGSVWINCFDVF-----------DAA 289 (328)
Q Consensus 228 fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v~t~d~~~~~~---~~~~l~~g~v~iN~~~~~-----------~~~ 289 (328)
||||++|++|+|++||++++|++. |||+++|||+|.+.+++ +++++++|+|+||++..+ .+.
T Consensus 338 FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~ 417 (452)
T 3my7_A 338 LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPS 417 (452)
T ss_dssp SSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC---------------
T ss_pred cCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCce
Confidence 999999999999999999999985 99999999999877777 999999999999997542 122
Q ss_pred CCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCC
Q 020284 290 IPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 325 (328)
Q Consensus 290 ~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~~~~~ 325 (328)
+++ |.+..|.+...+.-+.+++.+.|+|..+.+|+
T Consensus 418 ~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~~ 452 (452)
T 3my7_A 418 LTL-GCGSWGGNSISENVGPKHLINKKTVAKRAENM 452 (452)
T ss_dssp --------------CCCCCGGGGEEEEEEECCC---
T ss_pred Eee-eccccCCCccCCCCChhHeeeeeEEEeecCCC
Confidence 222 33444444555566778888999998887764
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=95.54 E-value=1.3 Score=40.95 Aligned_cols=230 Identities=17% Similarity=0.178 Sum_probs=122.7
Q ss_pred hhHHHHhcCCe-EE-EeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhh----cCCcCeEEEeCCHHHHH
Q 020284 5 KVGPALACGNT-IV-LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS----HMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 5 ~~~~ALaaGn~-vV-lkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~----~~~v~~v~ftGs~~~~~ 78 (328)
..+||-.+|+. +| .-|++. -.....+.-+.+.+|+. .+..-.|.....+|.- -|.||.|+=.|..=+..
T Consensus 151 ~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA~l~Gv~----eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~ 225 (423)
T 4gic_A 151 NAVPAKVAGVPELIMAVPAPR-GELNALVLAAAYISGVD----RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVAT 225 (423)
T ss_dssp HHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHHHHHTCC----EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHH
T ss_pred hhccHHHhCCCeEEEecCCCC-CCccHHHHHHHHhcCCc----EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHH
Confidence 46789999986 33 334332 22333444455566655 3333334444445543 47799988777776643
Q ss_pred HHHHHHhhCCCCcceecc-CCCC--ceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh
Q 020284 79 IVLQLAAKSNLKPVTLEL-GGKS--PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 155 (328)
Q Consensus 79 ~v~~~~a~~~~~~~~~e~-gG~~--~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 155 (328)
+=..... .+-..+ .|-+ .+|-++++|.+..|..++..+=+... .+.++|..+ ++|.+++.+.+.+
T Consensus 226 AKr~v~g-----~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEHd~~-----a~~iLvT~s--~~la~~V~~~i~~ 293 (423)
T 4gic_A 226 AKKLVFG-----QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEHDED-----AQAILISPD--AAHLEAVQASIER 293 (423)
T ss_dssp HHHHHBT-----TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTTCTT-----CEEEEEESC--HHHHHHHHHHHHH
T ss_pred HHHHhcC-----CcCcccccccceEEEEeCCCCCHHHHHHHHHHhhccCCC-----CeEEEEeCc--HHHHHHHHHHHHH
Confidence 2221111 122211 1222 24455678999988888866543322 344555444 3445555444432
Q ss_pred cccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 156 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 156 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
.--. +.. .+.+++.++ -+| .++
T Consensus 294 ~l~~-----------l~r---~~i~~~sl~-----------------------------------------~~g---~ii 315 (423)
T 4gic_A 294 LLPG-----------MER---AEVIRTSLE-----------------------------------------RRG---GMI 315 (423)
T ss_dssp HGGG-----------CTT---HHHHHHHHH-----------------------------------------HHC---EEE
T ss_pred HHhh-----------Ccc---HHHHHHHHh-----------------------------------------cCc---eEE
Confidence 1100 000 111111111 011 355
Q ss_pred eecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcCCCCC---------CCCCCccCCCCCCCCCcch
Q 020284 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWINCFDVF---------DAAIPFGGYKQSGQGREKG 305 (328)
Q Consensus 236 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~-~g~v~iN~~~~~---------~~~~p~gG~~~SG~g~~~g 305 (328)
.++|++|+++++|..-.- -+-|.++|.. .+..+++ +|.|++..+... +.-+|- +|..++.+
T Consensus 316 ~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~s 386 (423)
T 4gic_A 316 LVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSS 386 (423)
T ss_dssp ECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCSEEEEC----------------CCCC-----TTGGGTCC
T ss_pred EEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEeceeecCCCCchhhhhcCcCCCccCCC-----CCcccccC
Confidence 679999999999995432 4668888864 5677775 999999875331 234555 44556666
Q ss_pred HHHHHhhhhceEE
Q 020284 306 SYSLSNYLQVKAV 318 (328)
Q Consensus 306 ~~~~~~~~~~k~i 318 (328)
..++..|.++-++
T Consensus 387 gLsv~~F~K~~s~ 399 (423)
T 4gic_A 387 PLGVYDFQKRSSL 399 (423)
T ss_dssp CCCGGGGEEEEEE
T ss_pred CCCHHHeeeeeeE
Confidence 6777888775444
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=92.14 E-value=7.3 Score=36.04 Aligned_cols=77 Identities=21% Similarity=0.273 Sum_probs=55.0
Q ss_pred EeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcCCCC---------CCCCCCccCCCCCCCCC
Q 020284 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWINCFDV---------FDAAIPFGGYKQSGQGR 302 (328)
Q Consensus 233 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~-~g~v~iN~~~~---------~~~~~p~gG~~~SG~g~ 302 (328)
.++.++|++||++++|..-.- -+-|.++|.. .++.+++ +|.|++..+.. .+.-+|-+| ..+
T Consensus 306 ~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G-----~AR 376 (434)
T 1kae_A 306 RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTA 376 (434)
T ss_dssp EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGG
T ss_pred eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCCCC-----cee
Confidence 466789999999999996433 4678898874 5667775 99999997643 144566655 556
Q ss_pred cchHHHHHhhhhceEE
Q 020284 303 EKGSYSLSNYLQVKAV 318 (328)
Q Consensus 303 ~~g~~~~~~~~~~k~i 318 (328)
+.+..+++.|.++-++
T Consensus 377 ~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 377 TCSSLGLADFQKRMTV 392 (434)
T ss_dssp TCCCSCGGGGEEEEEE
T ss_pred ccCCCcHHhccceeeE
Confidence 6666677788775544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 328 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-133 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-132 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-123 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-100 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 9e-88 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-82 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 8e-71 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 5e-68 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-32 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-23 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-15 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 387 bits (994), Expect = e-133
Identities = 201/326 (61%), Positives = 245/326 (75%), Gaps = 2/326 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 168 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 227
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 228 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 287
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQC CAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 288 LFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 347
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 348 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 407
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 408 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 467
Query: 301 GREKGSYSLSNYLQVKAVVTAL--KN 324
GRE G Y L Y +VK V + KN
Sbjct: 468 GRELGEYGLQAYTEVKTVTVKVPQKN 493
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 383 bits (984), Expect = e-132
Identities = 193/319 (60%), Positives = 244/319 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MF WK+GPAL+CGNT+V+K AEQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++
Sbjct: 168 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAIS 227
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDK+AFTGST GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH
Sbjct: 228 SHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQG 287
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+F++QGQCC A SR FV ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKI
Sbjct: 288 VFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKI 347
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L I SG GAKLE GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K L
Sbjct: 348 LDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 407
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
D+VI+R+N + YGL+AG+FT+++D A T+ AL+ G+VW+NC+ V A PFGG+K SG
Sbjct: 408 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGN 467
Query: 301 GREKGSYSLSNYLQVKAVV 319
GRE G Y Y +VK V
Sbjct: 468 GRELGEYGFHEYTEVKTVT 486
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 360 bits (925), Expect = e-123
Identities = 131/330 (39%), Positives = 197/330 (59%), Gaps = 8/330 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ AWK PALACGN +V K + TP++ + ++++ HEAG+P G++N+V G G G+ L
Sbjct: 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLC 229
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H V K++FTGS TGK V++++AK +K VTLELGGKSP ++ +D +++ A A A
Sbjct: 230 HHPNVAKVSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMA 288
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F QGQ C G+R FV + QF+E+ VVGDP + G I Q +K+
Sbjct: 289 NFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKV 348
Query: 181 LKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 234
L ++ GA++ GGE L GY++ P V +DDM K+EIFGPV S+
Sbjct: 349 LGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSV 408
Query: 235 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGG 294
L + +EV+QR+N + +GLA+GVFT ++ A+ + L G+ +IN + + +PFGG
Sbjct: 409 LPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGG 468
Query: 295 YKQSGQGREKGSYSLSNYLQVKAVVTALKN 324
YK SG GRE G ++ Y Q+K V+ + +
Sbjct: 469 YKMSGFGRENGQATVDYYSQLKTVIVEMGD 498
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 302 bits (773), Expect = e-100
Identities = 116/320 (36%), Positives = 176/320 (55%), Gaps = 3/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GN +VLK +E TPL+AL +++L + P GV+NI+ G G T G L
Sbjct: 154 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLT 212
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V ++ TGS TG+ ++ S++K +ELGGK+P IV +DAD++ E
Sbjct: 213 GHPKVRMVSLTGSIATGEHIIS-HTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTF 271
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
++N GQ C A R + + +YD VEK A G P + GP E++
Sbjct: 272 GYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERV 331
Query: 181 LKYIRSGV-DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
K + G K+ TGGE+ GYY PT+ G D I + E+FGPV S+ + +
Sbjct: 332 GKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDN 391
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
++V+ +N SQYGLA+ V+T ++ A+ + L+ G W+N + + +P GG K SG
Sbjct: 392 EEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSG 451
Query: 300 QGREKGSYSLSNYLQVKAVV 319
G++ Y L +Y V+ V+
Sbjct: 452 YGKDMSLYGLEDYTVVRHVM 471
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 270 bits (691), Expect = 9e-88
Identities = 115/326 (35%), Positives = 171/326 (52%), Gaps = 10/326 (3%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+F + +A GNT++ K AE + V ++ HEAG PPGV+N + G G GA L
Sbjct: 189 IFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLV 248
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAE 115
H + + FTGS G + + A + + K +E GGK+ IV E AD D AAE
Sbjct: 249 EHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAE 308
Query: 116 LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 175
+ + QGQ C A SR + + Y+ +E+ A + VG P + GP + +E
Sbjct: 309 GVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAE 367
Query: 176 QFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
Q K+L YI G + G + GG+RL +GY+I PTVFT V IA++EIFGPV S++
Sbjct: 368 QERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426
Query: 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFG 293
+ KD E ++ +N + YGL GV++ + R VG+++ N PFG
Sbjct: 427 RVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFG 486
Query: 294 GYKQSGQGREKGSYS-LSNYLQVKAV 318
G+K SG + G+ L +L++KAV
Sbjct: 487 GFKLSGTNAKTGALDYLRLFLEMKAV 512
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 254 bits (650), Expect = 4e-82
Identities = 114/324 (35%), Positives = 164/324 (50%), Gaps = 8/324 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ K+ PAL GN I K Q +S L +++ EAGLP GV N ++G G G +
Sbjct: 158 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIV 217
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H V+ + FTGST G+ + ++A ++P+ LELGGK IV EDAD++ A+
Sbjct: 218 EHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAG 274
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F GQ C A R V ESV D+ VEK + + + P ID++ + +
Sbjct: 275 AFGYSGQRCTAVKRVLVMESVADELVEK-IREKVLALTIGNPEDDADITPLIDTKSADYV 333
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
I D GA T +R +G I P +F V DM +A +E FGPV I++ +
Sbjct: 334 EGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 390
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSG 299
+E I+ SN S+YGL A +FT++ A + L VG+V IN PF G K+SG
Sbjct: 391 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSG 450
Query: 300 QGREKGSYSLSNYLQVKAVVTALK 323
G + YS+ VK+VV +K
Sbjct: 451 AGIQGVKYSIEAMTTVKSVVFDIK 474
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 224 bits (572), Expect = 8e-71
Identities = 81/266 (30%), Positives = 114/266 (42%), Gaps = 10/266 (3%)
Query: 56 GAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE 115
D + +TGST GKIV+ AAK +L PVTLELGGKSP V +D D+D A
Sbjct: 170 ETTELLKERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACR 228
Query: 116 LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 175
+ F N GQ C A S+ +Q VEK G+ K G I+
Sbjct: 229 RIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRIINDR 287
Query: 176 QFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
F+++ I + G YI PT+ V + ++EIFGPV I+
Sbjct: 288 HFQRVKGLIDNQK------VAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIV 341
Query: 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFG 293
+ L+E IQ N + LA VF++N ++ G V N + +PFG
Sbjct: 342 CVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFG 401
Query: 294 GYKQSGQGREKGSYSLSNYLQVKAVV 319
G SG G G S + ++ +
Sbjct: 402 GVGNSGMGAYHGKKSFETFSHRRSCL 427
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 219 bits (557), Expect = 5e-68
Identities = 84/271 (30%), Positives = 126/271 (46%), Gaps = 5/271 (1%)
Query: 51 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 110
+ + V ++FTGST G+ V+++ +K +ELGG P IV EDAD+
Sbjct: 220 LPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADL 276
Query: 111 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 170
D AA+ ++ GQ C A VY + VE+ VGDP + GP
Sbjct: 277 DLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGP 336
Query: 171 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKP-TVFTGVKDDMLIAKDEIFG 229
I ++++ I V+ G ++ GG RLG DM++ K E+F
Sbjct: 337 LISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFA 396
Query: 230 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA 289
PV S ++ KDLD+ I+ +N YGL A VF ++ +R L VG+++IN
Sbjct: 397 PVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIG 456
Query: 290 -IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319
PFGG K+SG RE Y++ K +V
Sbjct: 457 YYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 487
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 122 bits (307), Expect = 2e-32
Identities = 52/324 (16%), Positives = 89/324 (27%), Gaps = 48/324 (14%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG-YGPTAGAAL 59
+ AL GNTI+L+ S + + EA + T + +
Sbjct: 126 VTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLV 185
Query: 60 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 119
+ + + G ++ + PV G V E AD+ KA +
Sbjct: 186 LEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIIN 245
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
A C A + VHE + +F+ K V ++ E
Sbjct: 246 AKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATED 304
Query: 180 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
E + +I K+
Sbjct: 305 DWPT------------------------------------------EYLDLIIAIKVVKN 322
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
+DE I+ G + + T N A + + +V++N F FG + G
Sbjct: 323 VDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIG 382
Query: 300 QGREK----GSYSLSNYLQVKAVV 319
++ G L K VV
Sbjct: 383 ISTQRFHARGPVGLRELTTYKFVV 406
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 99.0 bits (245), Expect = 1e-23
Identities = 55/336 (16%), Positives = 105/336 (31%), Gaps = 28/336 (8%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLS----ALYVSKLLHEAGLPPGVLNIVSGYGPTAG 56
ALA G +++K P + A + + L + LP + ++ G G
Sbjct: 150 AAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALG 209
Query: 57 AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 116
AL SH E+ + FTGS G+ + LA + G + + A+L
Sbjct: 210 QALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADL 269
Query: 117 AH---YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQID 173
A ++ GQ C F + Q + +++ +
Sbjct: 270 ADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQS 329
Query: 174 SEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233
I + + ++EIFGP
Sbjct: 330 QVVSRGSDDGIDVTFS---------QAESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 380
Query: 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT--ANTLMRALR--VGSVWINCF----DV 285
I+ +++ +++ S L A + D + L+ L G + N + +V
Sbjct: 381 IVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEV 440
Query: 286 FDAAI---PFGGYKQSGQGREKGSYSLSNYLQVKAV 318
A + P+ S G+ ++ +L+ A
Sbjct: 441 GYAMVHGGPYPASTHSA-STSVGAEAIHRWLRPVAY 475
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 74.5 bits (182), Expect = 2e-15
Identities = 40/297 (13%), Positives = 79/297 (26%), Gaps = 33/297 (11%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL---HEAGLPPGVLNIVSGYGPTAGA 57
+ A ++ GN +LK +++ + ++K++ + + S
Sbjct: 129 VIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQ 188
Query: 58 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 117
++ ++ D+ +++ + PV G + EDAD+ KA ++
Sbjct: 189 DVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRIS 248
Query: 118 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 177
A C ++ + N V
Sbjct: 249 LDAKTNYPAGCNA-METLLINPKFSKWWEVLENLTLEGGVT------------------- 288
Query: 178 EKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
I + D LG TV + D E +
Sbjct: 289 ------IHATKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDF---DKEFLSLDLAAKF 339
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFG 293
+ IQ N + T N A M+ + V+ N F +G
Sbjct: 340 VTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYG 396
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 328 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 92.97 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=3.4e-80 Score=599.20 Aligned_cols=323 Identities=59% Similarity=1.033 Sum_probs=314.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++.+.++.|++||++++|.||||+.+|+.|+
T Consensus 169 ~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~ 248 (494)
T d1bxsa_ 169 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998788899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++.+++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~ 328 (494)
T d1bxsa_ 249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCT
T ss_pred HHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeecc
Confidence 98887568999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++.++++++++++++++++|+++++||...+..|+|++|||+.++++++.++++|+||||++|++|+|++
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~ 408 (494)
T d1bxsa_ 329 LTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLD 408 (494)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred CCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHH
Confidence 99999999999999999999999999999999999998777789999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 409 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~ 488 (494)
T d1bxsa_ 409 DVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 488 (494)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred CCC
Q 020284 322 LKN 324 (328)
Q Consensus 322 ~~~ 324 (328)
+.+
T Consensus 489 ~~~ 491 (494)
T d1bxsa_ 489 ISQ 491 (494)
T ss_dssp CSC
T ss_pred cCC
Confidence 754
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=4.9e-79 Score=590.78 Aligned_cols=323 Identities=61% Similarity=1.028 Sum_probs=313.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++.+|.++++++|+|+|++|+|+|++.+.++.|+.||+++.|.||||+.+|+.|+
T Consensus 169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~ 248 (494)
T d1o04a_ 169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++..+++|+++|+||+||+||++|||+|.|++.+++++|.++||.|++++++|||++++|+|++++.++++++++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p 328 (494)
T d1o04a_ 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCc
Confidence 88764468999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||++++.+++|+++++++++++|+++++||......|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~ 408 (494)
T d1o04a_ 329 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 408 (494)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHH
Confidence 99999999999999999999999999999999999998777789999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
||++++|+++|||+++|||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 409 eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~ 488 (494)
T d1o04a_ 409 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 488 (494)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEe
Confidence 99999999999999999999999999999999999999999888888999999999999999999999999999999999
Q ss_pred CCC
Q 020284 322 LKN 324 (328)
Q Consensus 322 ~~~ 324 (328)
++.
T Consensus 489 ~p~ 491 (494)
T d1o04a_ 489 VPQ 491 (494)
T ss_dssp CSC
T ss_pred CCC
Confidence 864
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=5.7e-77 Score=576.92 Aligned_cols=320 Identities=41% Similarity=0.767 Sum_probs=309.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++.+++++++++|+|+|++|+|++ +.+.++.|++||++|+|.||||+++|+.|+
T Consensus 172 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~ 250 (503)
T d1a4sa_ 172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVM 250 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999 678999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++++|++++.+.++++++|+|
T Consensus 251 ~~aa~~-~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~ 329 (503)
T d1a4sa_ 251 EMSAKT-VKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP 329 (503)
T ss_dssp HHHHTT-TCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhhc-CCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccc
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC------CCCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
.++.+++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.++++++.++++|+||||++|+
T Consensus 330 ~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~ 409 (503)
T d1a4sa_ 330 LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409 (503)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred cccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEE
Confidence 99999999999999999999999999999999999997432 468999999999999999999999999999999
Q ss_pred eecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhc
Q 020284 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 315 (328)
Q Consensus 236 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~ 315 (328)
+|+|++||++++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++||+.
T Consensus 410 ~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~ 489 (503)
T d1a4sa_ 410 PFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQL 489 (503)
T ss_dssp EECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEE
T ss_pred EcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhCe
Confidence 99999999999999999999999999999999999999999999999888788999999999999999999999999999
Q ss_pred eEEEEeCC
Q 020284 316 KAVVTALK 323 (328)
Q Consensus 316 k~i~~~~~ 323 (328)
|+|++++.
T Consensus 490 k~v~~~~~ 497 (503)
T d1a4sa_ 490 KTVIVEMG 497 (503)
T ss_dssp EEEEECCS
T ss_pred EEEEEcCC
Confidence 99999874
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-76 Score=571.31 Aligned_cols=319 Identities=36% Similarity=0.632 Sum_probs=306.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..++++++++ +|+|++|+|++++.+.++.|++||+|++|.||||+++|+.|.
T Consensus 155 ~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~ 233 (474)
T d1wnda_ 155 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII 233 (474)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred hhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHH
Confidence 5789999999999999999999999999999999875 999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 234 ~~a~~~-~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~ 312 (474)
T d1wnda_ 234 SHTASS-IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAP 312 (474)
T ss_dssp HHHGGG-TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCT
T ss_pred HhhhcC-CCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCc
Confidence 999885 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCe-EeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK-LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~-~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.++++.+||+++..+.+++++++++++.+|+. ++.|+......|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 313 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~ 392 (474)
T d1wnda_ 313 DDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 392 (474)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCH
Confidence 99999999999999999999999999999985 55666655677999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+||++++|+++|||+++|||+|.+.++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 393 deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i 472 (474)
T d1wnda_ 393 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMV 472 (474)
T ss_dssp HHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEE
Confidence 99999999999999999999999999999999999999999988888999999999999999999999999999999998
Q ss_pred eC
Q 020284 321 AL 322 (328)
Q Consensus 321 ~~ 322 (328)
++
T Consensus 473 ~~ 474 (474)
T d1wnda_ 473 KH 474 (474)
T ss_dssp EC
T ss_pred eC
Confidence 75
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.3e-74 Score=560.76 Aligned_cols=319 Identities=36% Similarity=0.582 Sum_probs=301.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|++++.+.++.|++||++++|.||||+.+|+.|+
T Consensus 190 ~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~ 269 (516)
T d1uzba_ 190 FTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY 269 (516)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred ccccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHH
Confidence 57899999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhh-----CCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 82 QLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 82 ~~~a~-----~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
+.++. .+++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|++++.++++++
T Consensus 270 ~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l 349 (516)
T d1uzba_ 270 EAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERL 349 (516)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTC
T ss_pred HHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhc
Confidence 98872 2479999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
++| |.++++++||+++..+++++++++++++++|+.+ ++|...+..|+|+.|||+.++++++.+++||+||||++|++
T Consensus 350 ~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~ 427 (516)
T d1uzba_ 350 SVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIR 427 (516)
T ss_dssp CBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEE
T ss_pred ccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEE
Confidence 999 5688899999999999999999999999888755 56665666799999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcch-HHHHHhhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKG-SYSLSNYL 313 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g-~~~~~~~~ 313 (328)
|+|++||++++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++| .+++++||
T Consensus 428 ~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~ 507 (516)
T d1uzba_ 428 VKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFL 507 (516)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTE
T ss_pred eCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhC
Confidence 9999999999999999999999999999999999999999999998754 35789999999999998865 79999999
Q ss_pred hceEEEEeC
Q 020284 314 QVKAVVTAL 322 (328)
Q Consensus 314 ~~k~i~~~~ 322 (328)
+.|+|..|+
T Consensus 508 ~~k~v~~r~ 516 (516)
T d1uzba_ 508 EMKAVAERF 516 (516)
T ss_dssp EEEEEEEEC
T ss_pred CeeeEEEcC
Confidence 999998764
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=6.6e-69 Score=520.65 Aligned_cols=320 Identities=32% Similarity=0.525 Sum_probs=296.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++|+|.++++++.++ .+.+..|++||+++.+.||||+..++.+.
T Consensus 172 ~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~-~~~~~~l~~~~~i~~v~ftGs~~~g~~i~ 250 (499)
T d1ky8a_ 172 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLP-GKEAEKIVADDRVAAVSFTGSTEVGERVV 250 (499)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCC-GGGGHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCC-hHHHHHHhhccceeEEEeecccccceEEe
Confidence 57899999999999999999999999999999999999999999999985 45678899999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+ +.+|+++|+||+||+||++|||+|.|++.+++++|+++||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 251 ~~~---~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p 327 (499)
T d1ky8a_ 251 KVG---GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 327 (499)
T ss_dssp HHH---CSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred ecc---cccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCC
Confidence 876 35899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceee---ecCCCCCcccCcceecceEEeEeec
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF---TGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl---~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
.|+++++||+++.++++++++++++++.+|++++.+|..... .+..++++ ....+|+.+++||+||||++|++|+
T Consensus 328 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~ 405 (499)
T d1ky8a_ 328 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGP--TYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVK 405 (499)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEET--TEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEES
T ss_pred CCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccc--cccccccccccccCCCCChhhhccccCceEEEEEcC
Confidence 999999999999999999999999999999999999875432 23333333 3456789999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
|.+||++++|+++|||++||||+|.+.++++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 406 ~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 485 (499)
T d1ky8a_ 406 DLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKT 485 (499)
T ss_dssp SHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEE
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhCEEE
Confidence 999999999999999999999999999999999999999999997664 4789999999999999999999999999999
Q ss_pred EEEeCC-CCCC
Q 020284 318 VVTALK-NPAW 327 (328)
Q Consensus 318 i~~~~~-~~~~ 327 (328)
|+++++ .+.|
T Consensus 486 i~~~~~~~~~~ 496 (499)
T d1ky8a_ 486 IVFNYKGKGVW 496 (499)
T ss_dssp EEEECTTSSSC
T ss_pred EEEcCCCCCCC
Confidence 999975 4555
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.2e-67 Score=504.73 Aligned_cols=310 Identities=31% Similarity=0.456 Sum_probs=285.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++++. +|+++++++.+.+.+. ..+. ++.+|.|.||||+.+|+.|+
T Consensus 119 ~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~-~~~~~~v~fTGs~~~G~~i~ 195 (446)
T d1ad3a_ 119 TIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNLYLVVKGGVPET-TELL-KERFDHIMYTGSTAVGKIVM 195 (446)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTTEEECCCSHHHH-HHHT-TSCCSEEEEESCHHHHHHHH
T ss_pred ccccccccchhcccccccccceecccccccccccccc-ccccccccccccchhh-hhhc-ccccCceEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999875 9999999999855444 4444 56799999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++.+ +|++
T Consensus 196 ~~aa~~-~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~ 273 (446)
T d1ad3a_ 196 AAAAKH-LTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGED 273 (446)
T ss_dssp HHHHTT-TCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSC
T ss_pred HHHHhc-CCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCCCccccCCccccccchhHHHHHhhhhhhhee-eccc
Confidence 999884 89999999999999999999999999999999999999999999999999999999999999998887 8999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++.+++||++++.+.++++++++++ +...|+. .+..+.|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 274 ~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~-~~~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~ 347 (446)
T d1ad3a_ 274 AKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGT-WDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLE 347 (446)
T ss_dssp GGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCC-EETTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHH
T ss_pred ccccccccchhhhhhhhhhhccccch-----hccccee-ecCCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHH
Confidence 99999999999999999998887643 3333333 34567899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 348 eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 427 (446)
T d1ad3a_ 348 EAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCL 427 (446)
T ss_dssp HHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEE
T ss_pred HHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCccccccceeccchHHHHHHHHhceeEEE
Confidence 99999999999999999999999999999999999999998653 4689999999999999999999999999999999
Q ss_pred EeC
Q 020284 320 TAL 322 (328)
Q Consensus 320 ~~~ 322 (328)
++.
T Consensus 428 ~~~ 430 (446)
T d1ad3a_ 428 VKS 430 (446)
T ss_dssp ECC
T ss_pred Ecc
Confidence 874
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=2.2e-66 Score=500.48 Aligned_cols=315 Identities=37% Similarity=0.538 Sum_probs=297.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++.+++++|+++|+|+|++|+|++++.++++.|+.||+++.|.||||+.+++.+.
T Consensus 159 ~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~ 238 (474)
T d1euha_ 159 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 238 (474)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchh
Confidence 56899999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ .+|+++|+||+||+||++|||++.|++.+++++|.++||.|++++++|||++++++|++.++++...++.|++
T Consensus 239 ~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~ 315 (474)
T d1euha_ 239 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 315 (474)
T ss_dssp HHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred hhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCc
Confidence 8763 6799999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.+.. .++|.+...+.+++.+.+......+...+..+. ..|+|++|||+..+++++.+++||+||||++|++|+|++
T Consensus 316 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~d 391 (474)
T d1euha_ 316 EDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK---REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE 391 (474)
T ss_dssp GGTC-SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC---EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHH
T ss_pred cccc-ccccccchHHHHHHHHHHHhhhcccccccccCC---CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHH
Confidence 8765 578999999999999999999998888775543 368999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
||++++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 392 eai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 471 (474)
T d1euha_ 392 EAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 471 (474)
T ss_dssp HHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEEEE
Confidence 99999999999999999999999999999999999999999754 45789999999999999999999999999999998
Q ss_pred eCC
Q 020284 321 ALK 323 (328)
Q Consensus 321 ~~~ 323 (328)
+.+
T Consensus 472 ~~~ 474 (474)
T d1euha_ 472 DIK 474 (474)
T ss_dssp ECC
T ss_pred ecC
Confidence 753
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=2.2e-57 Score=439.35 Aligned_cols=301 Identities=21% Similarity=0.327 Sum_probs=251.6
Q ss_pred hhhhHHHHhcCCeEEEeCCCCChHHHHHHH----HHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 3 AWKVGPALACGNTIVLKTAEQTPLSALYVS----KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 3 ~~~~~~ALaaGn~vVlkps~~~~~t~~~l~----~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
.+++++||++||+||+|||+.+|.++..+. ++++++|+|+|++|+|++++.+.++.|++||++++|.||||+.+|+
T Consensus 152 ~~~~a~ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~ 231 (504)
T d1ez0a_ 152 GGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGR 231 (504)
T ss_dssp SHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred hHHHHHHHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHH
Confidence 468999999999999999999999987765 5566779999999999998888999999999999999999999999
Q ss_pred HHHHHHhhCCCCcc--eeccCCCCceecCCCCCHHHHH--HHHHHHHHhhcCCCccCCCeeEEcccch-HHHHHHHHHHH
Q 020284 79 IVLQLAAKSNLKPV--TLELGGKSPFIVCEDADVDKAA--ELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALA 153 (328)
Q Consensus 79 ~v~~~~a~~~~~~~--~~e~gG~~~~iV~~dad~~~aa--~~iv~~~~~~~Gq~C~~~~~v~V~~~~~-~~f~~~l~~~~ 153 (328)
.|.+.++++ ++|+ ++|+|||||+||++|||++.|+ ..++.++|.|+||.|++++++||+++.+ +.|++.+++.+
T Consensus 232 ~i~~~aa~~-~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~ 310 (504)
T d1ez0a_ 232 ALFNLAHER-PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLI 310 (504)
T ss_dssp HHHHHHHHS-SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHhhhhcc-cccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhh
Confidence 999999885 7765 4599999999999999999874 4789999999999999999999888765 46777776665
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeee---cCCCCCcccCcceecc
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFT---GVKDDMLIAKDEIFGP 230 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~---~~~~~~~~~~~E~fgP 230 (328)
+. .++++.+||+++..+.+++ ++.+.++|+.+..++.. +.+..|+++. +...++++++||+|||
T Consensus 311 ~~------~~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGP 377 (504)
T d1ez0a_ 311 RQ------QSPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGP 377 (504)
T ss_dssp HH------CCCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSS
T ss_pred hh------cccccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCC
Confidence 53 2557789999998887775 55666788888887753 3344444443 2334678999999999
Q ss_pred eEEeEeecChhHHHHHhhcCCCCceEEEecC--CHHHHHHHHHhcc--eeEEEEcCCCCC---C----CCCCccCCCCCC
Q 020284 231 VQSILKYKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGSVWINCFDVF---D----AAIPFGGYKQSG 299 (328)
Q Consensus 231 vl~v~~~~~~~eai~~~n~~~~gl~~~v~t~--d~~~~~~~~~~l~--~g~v~iN~~~~~---~----~~~p~gG~~~SG 299 (328)
|++|++|+|++||++++|+++|||+++|||+ |..++++++++++ +|+|+||++++. . ...||||.+.||
T Consensus 378 vl~i~~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg 457 (504)
T d1ez0a_ 378 QSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA 457 (504)
T ss_dssp EEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSS
T ss_pred eeeeeecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCC
Confidence 9999999999999999999999999999996 4568999999996 899999997642 1 234788888888
Q ss_pred CCCcchHHHHHhhhhceEE
Q 020284 300 QGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 300 ~g~~~g~~~~~~~~~~k~i 318 (328)
.+ ..|.+++++|+++..+
T Consensus 458 ~~-~~G~~~i~~f~r~v~~ 475 (504)
T d1ez0a_ 458 ST-SVGAEAIHRWLRPVAY 475 (504)
T ss_dssp CC-SSSGGGGGGGEEEEEE
T ss_pred CC-cchHHHHHHHhchhhh
Confidence 44 5689999999876543
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.6e-48 Score=366.66 Aligned_cols=273 Identities=20% Similarity=0.183 Sum_probs=213.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~a----glp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|.++..+++++.++ |+|.++++.+.+.+.+....+..+ +.+.|+||+..+
T Consensus 127 ~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 203 (414)
T d1o20a_ 127 TVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRL---REYLSLVIPRGG 203 (414)
T ss_dssp HHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTC---TTTCSEEEECSC
T ss_pred hhhccchheecccchhcccccccccccchhhhHHHhhhhhccccccccccccccchhhhhhcccc---cccCeEEEcccH
Confidence 5789999999999999999999999999999998877 555566777776555555555443 334444444445
Q ss_pred HHHHHHHhhCCCCcceeccCCCC-ceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKS-PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~-~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
..+.+.+++. .+++++|+||+| ++||++|||++.|++.++.++|.+ ||.|+++++++||++++|+|+++|.+...+.
T Consensus 204 ~~v~~~a~~~-~~~~~le~gGgn~~viv~~dAd~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~ 281 (414)
T d1o20a_ 204 YGLISFVRDN-ATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKH 281 (414)
T ss_dssp HHHHHHHHHH-CSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhc-cccceecccCCCCCeecccccchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHc
Confidence 5566666664 677777777655 688999999999999999999876 9999999999999999999999999988765
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
.++.+.+.. ...+.+.+... ....+++|+||||++|++
T Consensus 282 ~~~~~~~~~---------------------------------------~~~~~~~~~~~---~~~~~~~E~FgPvl~v~~ 319 (414)
T d1o20a_ 282 GVEVRGCEK---------------------------------------TREIVPDVVPA---TEDDWPTEYLDLIIAIKV 319 (414)
T ss_dssp TCEEEECHH---------------------------------------HHHHSTTSEEC---CGGGTTCCCCSSEEEEEE
T ss_pred CCccccchh---------------------------------------hhhhcccceec---ccccCCceeeeeEEEEEE
Confidence 544332110 01111222221 123468999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCC--Cc--chHHHHHhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNY 312 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g--~~--~g~~~~~~~ 312 (328)
|+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||+++.+....|||+.+.+|+| +. +|++|+++|
T Consensus 320 ~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~ 399 (414)
T d1o20a_ 320 VKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLREL 399 (414)
T ss_dssp ESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGG
T ss_pred eCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHHHh
Confidence 99999999999999999999999999999999999999999999998766556677766666643 33 389999999
Q ss_pred hhceEEEEe
Q 020284 313 LQVKAVVTA 321 (328)
Q Consensus 313 ~~~k~i~~~ 321 (328)
|+.|+|++.
T Consensus 400 t~~K~vv~~ 408 (414)
T d1o20a_ 400 TTYKFVVLG 408 (414)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEEC
Confidence 999998765
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.9e-44 Score=338.45 Aligned_cols=287 Identities=16% Similarity=0.146 Sum_probs=203.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH--------HcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCC
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH--------EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 73 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~--------~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs 73 (328)
.+.+.++||++||+|||||++.++.|+..+.++++ ++|+|+++++++++ ..+.+..|..|+++|.|+||||
T Consensus 130 t~~~~~lalksGNavIlk~~~~a~~s~~~l~~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg 208 (436)
T d1vlua_ 130 IANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGS 208 (436)
T ss_dssp HHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESC
T ss_pred hhhhhhcccccCCcceecCCcccccCHHHHHHHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecC
Confidence 35678899999999999999999999988877664 56999999999987 5677899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHH
Q 020284 74 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 153 (328)
Q Consensus 74 ~~~~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 153 (328)
...++.+.+.+ .+|++.+++|++|+||++|||++.|++.++.++|.++|| |++.++++||+++++.|...+....
T Consensus 209 ~~lv~~v~~~~----~~pvi~~~~G~~~~~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~ 283 (436)
T d1vlua_ 209 NALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTL 283 (436)
T ss_dssp HHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHH
T ss_pred Cceeeeeeccc----cceEEEecCCccceeecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHH
Confidence 99988876643 569999999999999999999999999999999999996 9999999999999888765554433
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEE
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 233 (328)
.. |. .+. .+. .++....+..... +. ..+....|++....+. .+.+|.|+|+++
T Consensus 284 ~~---gv------~l~--~~~----~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~---d~~~E~l~pvl~ 336 (436)
T d1vlua_ 284 EG---GV------TIH--ATK----DLKTAYFDKLNEL------GK---LTEAIQCKTVDADEEQ---DFDKEFLSLDLA 336 (436)
T ss_dssp HH---CC------CBE--ECH----HHHHHHHHHHHHH------TC---CCHHHHTTBC----------------CCCCE
T ss_pred hC---Cc------EEE--eCH----HHHHHhhhhhhhc------cc---ccccccccccCCCccc---chhhhhhCccee
Confidence 32 10 110 011 2222222221111 10 1122334444433222 268999999999
Q ss_pred eEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCC---CCC-CCCCcchHHHH
Q 020284 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGY---KQS-GQGREKGSYSL 309 (328)
Q Consensus 234 v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~---~~S-G~g~~~g~~~~ 309 (328)
|++++|++|||+++|++++||+++|||+|.+.+++|++++++|.|+||+++.+....+||.- |.| +..+.+|+.|+
T Consensus 337 v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl 416 (436)
T d1vlua_ 337 AKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGL 416 (436)
T ss_dssp EEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCS
T ss_pred EEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcCh
Confidence 99999999999999999999999999999999999999999999999999888777777632 333 44567899999
Q ss_pred HhhhhceEEEEe
Q 020284 310 SNYLQVKAVVTA 321 (328)
Q Consensus 310 ~~~~~~k~i~~~ 321 (328)
+.+|..|+++..
T Consensus 417 ~~ltt~k~~~~g 428 (436)
T d1vlua_ 417 DGLVSYQYQIRG 428 (436)
T ss_dssp GGGEEEEEEEEC
T ss_pred HHhceEEEEEEC
Confidence 999999998653
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=92.97 E-value=2.7 Score=36.85 Aligned_cols=227 Identities=17% Similarity=0.120 Sum_probs=125.0
Q ss_pred hhHHHHhcCCe--EEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhh----cCCcCeEEEeCCHHHHH
Q 020284 5 KVGPALACGNT--IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS----HMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 5 ~~~~ALaaGn~--vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~----~~~v~~v~ftGs~~~~~ 78 (328)
..+||-.+|+. |+.-|+...|. +.-+.+.+|+. .+..-.|.....+|.- -|.||.|+=.|+.=+..
T Consensus 142 ~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~----~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~ 213 (431)
T d1k75a_ 142 LATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQ----DVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTE 213 (431)
T ss_dssp HHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCC----EEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHH
T ss_pred HHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCcc----ceEecCChHHHHHHhhccCcccccceeecCCchhhhh
Confidence 46788888865 44556544442 33444555554 3333334444445543 46788888777776654
Q ss_pred HHHHHHhhCCCCcce---eccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEccc--chHHHHHHHHHHH
Q 020284 79 IVLQLAAKSNLKPVT---LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES--VYDQFVEKANALA 153 (328)
Q Consensus 79 ~v~~~~a~~~~~~~~---~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~--~~~~f~~~l~~~~ 153 (328)
+=.+..++- ..+- ..+..---+|-++++|.+.+|..++..+=+... .+.++|..+ ..++..+.+.+.+
T Consensus 214 AK~~v~g~~--~~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQAEH~~~-----a~~ilvt~~~~l~~~v~~~i~~~l 286 (431)
T d1k75a_ 214 AKRQVSQRL--DGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPD-----SQVILLTPAADMARRVAEAVERQL 286 (431)
T ss_dssp HHHHHHHST--TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHH
T ss_pred hHHhhcccC--CccccccccCCceEEEEecCCCCHHHHHHHHHhccCCccc-----ceeEEEeccHHHHHHHHHHHHHHh
Confidence 322222220 0111 112222235556678888888888766644433 333555444 3344444444444
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEE
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 233 (328)
+.+.- .+ ..+... +-. .
T Consensus 287 ~~l~r------------------~~----i~~~s~-------------------------------------~~~----~ 303 (431)
T d1k75a_ 287 AELPR------------------AE----TARQAL-------------------------------------NAS----R 303 (431)
T ss_dssp HTCSS------------------CH----HHHHHH-------------------------------------TTC----E
T ss_pred hhchH------------------HH----HHHhhh-------------------------------------ccc----e
Confidence 32210 00 000000 001 2
Q ss_pred eEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCCCC---------CCCCCCccCCCCCCCCCc
Q 020284 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDV---------FDAAIPFGGYKQSGQGRE 303 (328)
Q Consensus 234 v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~---------~~~~~p~gG~~~SG~g~~ 303 (328)
++.++|++|+++++|..-.- -+.|.++|.. ++...+ ++|.|++..+.. .+.-+|-|| ..++
T Consensus 304 ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~nAGsIflG~~sp~a~GDY~aGpnHvLPT~G-----~Ar~ 374 (431)
T d1k75a_ 304 LIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTAT 374 (431)
T ss_dssp EEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCCCSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGGT
T ss_pred EEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhhcchhhcCCCCcchhhccccCCCccCCCCC-----ceee
Confidence 44679999999999996433 3678888875 456666 599999987643 145677766 4556
Q ss_pred chHHHHHhhhhceEE
Q 020284 304 KGSYSLSNYLQVKAV 318 (328)
Q Consensus 304 ~g~~~~~~~~~~k~i 318 (328)
.+..++..|.++.++
T Consensus 375 ~sgLsv~dF~k~~s~ 389 (431)
T d1k75a_ 375 CSSLGLADFQKRMTV 389 (431)
T ss_dssp CCCCCGGGGEEEEEE
T ss_pred cCCCCHHHeeeeeeE
Confidence 666677778776554
|