Citrus Sinensis ID: 020320

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
Protein Sequence
MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYTESTRCHFIREQEETCS
Secondary Structure (PSIPRED)
ccEEEEEccccccccEEEccccccccccccEEEEEEEEcccHHHHHHHccccccccccccccccccEEEEEEcccccccccccEEEEEcccccccccccccccccccccccccccccccccccHHHHHHccHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHccccccEEEEccccccHHHHHHcccccEEEcccccHHHccccccEEEEcccccHHHHHHHcccccEEEEcccccccccEEEEEEEcHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHcccccEEEEEEccccccccHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEEEEccccccEEEEEcccccccccccEEEEEEEEEccHHHHHHHccccccccccccccccEEEEEEEEcccccccccccEEEEcccccccccccccccccEcEEEEccHHHEEEcccccHHHHHHHHcHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHccccEEEEcccccHHHHcccccEEEEcccccHHHHHHEccccEEEEEEccccccccEEEEEEccHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHccccEEEEEEEEcccccccccHHHHHHHcccc
Coil and Loop (DISEMBL)
mqnawyyeeygpkevlklgdfplptpqhdQLLVQVRAAAlnpidskrrqrplfpsdfpavpgcdmagivvakgtsvtkfntgdevygniqdfnaeGKLKQLGALAEFIVVEESLiakkpknisfeeaaslPLAVQTAIEGFktagfktgqtIFIVGGAGGVGTLVIQLAKHFYGAshvvattstpkvEFVKelgadkviDYRKTKYEDIEEKFDVLYDTigdcknsfvvakdnapivditwppshpraiyssLTVSGEILEKLRpfiesgklkaqidptgpykfkDVIEAFRYLETGRARGKVVIsafpytestrchfireqeetcs
Flexible Loop (DISEMBL)
MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALnpidskrrqrplFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVvattstpkvefvkelgadkvidyrktkyedIEEKFDVLYDTIGDCKNSFVVAKDNapivditwppshpRAIYSSLTVSGEILEKLRPFIESgklkaqidptgpykFKDVIEAFRYLETGRARGKVVISafpytestrchfireqeetcs
Low Complexity Region (SEG)
MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYTESTRCHFIREQEETCS
Disordered region (IsUnstruct)
***AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNP*********LFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYTESTRCHFI********
Disordered Region (DISOPRED)
MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYT****************
Disordered Region (DISEMBL)
MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYTESTRCHFIREQEETCS
Disordered Region (DISPRO)
MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYTESTRCHFIREQ*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYTESTRCHFIREQEETCS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	327	2.2.26 [Sep-21-2011]
Q9ZUC1	386	Quinone oxidoreductase-li	yes	no	0.935	0.792	0.491	2e-77
Q8H0M1	329	Quinone-oxidoreductase ho	N/A	no	0.899	0.893	0.332	8e-33
Q9SV68	329	Putative quinone-oxidored	no	no	0.889	0.884	0.305	3e-32
Q8WWV3	396	Reticulon-4-interacting p	yes	no	0.886	0.732	0.308	6e-32
Q0VC50	396	Reticulon-4-interacting p	yes	no	0.886	0.732	0.305	7e-32
Q924D0	396	Reticulon-4-interacting p	yes	no	0.886	0.732	0.297	1e-30
Q7T3C7	387	Reticulon-4-interacting p	yes	no	0.892	0.754	0.304	3e-29
O42909	347	Zinc-type alcohol dehydro	yes	no	0.892	0.841	0.315	4e-27
Q6GEP3	335	Zinc-type alcohol dehydro	yes	no	0.571	0.558	0.348	4e-24
P99173	335	Zinc-type alcohol dehydro	yes	no	0.571	0.558	0.348	7e-24

>sp|Q9ZUC1|QORL_ARATH Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2

 Score =  289 bits (740), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 153/311 (49%), Positives = 204/311 (65%), Gaps = 5/311 (1%)

Query: 2   QNAWYYEEYGPKEVLKL-GDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSD--FP 58
             AW Y +YG  +VLKL  +  +P  + DQ+L++V AAALNP+D+KRRQ     +D   P
Sbjct: 78  MKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPLP 137

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
            VPG D+AG+VV  G++V     GDEVY N+ +   EG  KQ G+LAE+  VEE L+A K
Sbjct: 138 TVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGP-KQFGSLAEYTAVEEKLLALK 196

Query: 119 PKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
           PKNI F +AA LPLA++TA EG     F  G++I ++ GAGGVG+LVIQLAKH YGAS V
Sbjct: 197 PKNIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKV 256

Query: 179 VATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVD 238
            AT ST K+E V+ LGAD  IDY K   ED+ +K+DV++D IG C  +  V K+   +V 
Sbjct: 257 AATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKVVA 316

Query: 239 ITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGR 298
           +T   + P      +T +G++L+KL P+IESGK+K  +DP GP+ F  V +AF YLET  
Sbjct: 317 LTGAVTPP-GFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLETNH 375

Query: 299 ARGKVVISAFP 309
           A GKVV+   P
Sbjct: 376 ATGKVVVYPIP 386

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q8H0M1|QORH_SPIOL Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1

 Score =  141 bits (355), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/334 (33%), Positives = 171/334 (51%), Gaps = 40/334 (11%)

Query: 1   MQNAWYYEEYGP-KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSD 56
           + +A  Y  YG   + LK  +  +P P+ D+LL+++ AA LNPID K ++   RPL P  
Sbjct: 5   LMHAIQYSGYGGGTDALKHVEVAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRK 64

Query: 57  FPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIA 116
           FP +PG D+AG VV  G++V +F TGD+V   +   +A G     GALAE+ V +E+L  
Sbjct: 65  FPTIPGTDVAGEVVQAGSAVNRFKTGDKVVAVLS--HATG-----GALAEYAVAKENLTV 117

Query: 117 KKPKNISFEEAASLPLAVQTAIEGF------KTAGFKTGQTIFIVGGAGGVGTLVIQLAK 170
            +P  +S  E A+LP+A  TA +        K  G    + I I   +GGVG   +QLAK
Sbjct: 118 ARPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAK 177

Query: 171 HFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE----EKFD-VLYDTIGDCKN 225
              G +HV AT     ++FVK LGAD+V+DY+  +   +     +K+D V++   G   +
Sbjct: 178 --LGNTHVTATCGARNLDFVKGLGADEVLDYKTPEGASLTSPSGKKYDYVVHGASGIPWS 235

Query: 226 SFVVAKDNA-PIVDITWPPSHPRAI-YSSLTVSGEIL------------EKLRPFIESGK 271
           +F      A  ++D+T  P+      +  LT S + L            E +   ++  K
Sbjct: 236 TFEPNLSEAGKVIDLTPGPTAMMTFAWKKLTFSKKQLVPLLLIPKIPNFEYVVNLVKEKK 295

Query: 272 LKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           LK  ID   P    +  +A+  +  G A GK++I
Sbjct: 296 LKTVIDSKHPLSKGE--DAWSRIMGGHATGKIII 327

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9SV68|QORH_ARATH Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1

 Score =  139 bits (350), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 46/337 (13%)

Query: 1   MQNAWYYEEYGPKEV-LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSD 56
           + +A  Y  YG     L+    P+PTP+ +++ +++ A +LNP+D K ++   RP  P  
Sbjct: 5   LMHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRK 64

Query: 57  FPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIA 116
           FP +P  D+AG VV  G+ V  F  GD+V   +            G LAEF V  E L  
Sbjct: 65  FPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLGG-------GGLAEFAVATEKLTV 117

Query: 117 KKPKNISFEEAASLPLAVQTAIE------GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAK 170
           K+P+ +   EAA+LP+A  TA++      G K  G      I +   +GGVG   +QLAK
Sbjct: 118 KRPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAK 177

Query: 171 HFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVA 230
                +HV AT     +EFVK LGAD+V+DY+  +   ++      YD +  C N    +
Sbjct: 178 --LANAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFS 235

Query: 231 ------KDNAPIVDITWPPSHPRAIYS----SLTVS------------GEILEKLRPFIE 268
                  +N  ++DIT     P A+++     +T+S             E LE +   ++
Sbjct: 236 VFEPNLSENGKVIDIT---PGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVK 292

Query: 269 SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            GK+K  ID   P    +  +A+     G A GK+++
Sbjct: 293 EGKVKTVIDSKHPLSKAE--DAWAKSIDGHATGKIIV 327

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8WWV3|RT4I1_HUMAN Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2

 Score =  138 bits (347), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 173/363 (47%), Gaps = 73/363 (20%)

Query: 4   AWYYEEYGPKEVLKLG-DFPLPTPQH-DQLLVQVRAAALNPIDSKRR-----------QR 50
           AW  ++YG  EVL+   +  +P   + ++++V+V AA++NPID   R           + 
Sbjct: 45  AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 104

Query: 51  PLF----PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAE 106
           PL       +FP   G D++G+V+  G  V  F  GDEV+  +  +      KQ G L+E
Sbjct: 105 PLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPW------KQ-GTLSE 157

Query: 107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFK----TGQTIFIVGGAGGV 161
           F+VV  + ++ KPK+++  +AASLP    TA     K  G      TG+ + I+G +GGV
Sbjct: 158 FVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGV 217

Query: 162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK---FDVLYD 218
           GT  IQ+ K +   +HV A  S    E V++LGAD VIDY+    E+  +    FD + D
Sbjct: 218 GTFAIQVMKAW--DAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILD 275

Query: 219 TIGDCKNS--------------------FVVAKDNAPIVD------IT---------WPP 243
            +G    +                    F++  D   I D      +T         W  
Sbjct: 276 NVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKG 335

Query: 244 SHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKV 303
            H R  ++    SG  L+ +   +++GK++  I+ T P  F  V EAF  +E G ARGK 
Sbjct: 336 VHYR--WAFFMASGPCLDDIAELVDAGKIRPVIEQTFP--FSKVPEAFLKVERGHARGKT 391

Query: 304 VIS 306
           VI+
Sbjct: 392 VIN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Homo sapiens (taxid: 9606)

>sp|Q0VC50|RT4I1_BOVIN Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1

 Score =  138 bits (347), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 172/363 (47%), Gaps = 73/363 (20%)

Query: 4   AWYYEEYGPKEVLKLG-DFPLPTPQH-DQLLVQVRAAALNPIDSKRR-----------QR 50
           AW  ++YG  EVL+   +  +P   + ++++++V AA++NPID   R           + 
Sbjct: 45  AWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNMKRD 104

Query: 51  PLF----PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAE 106
           PL       +FP   G D++G+V+  G  V  F  GDEV+  +  +      KQ G L+E
Sbjct: 105 PLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPW------KQ-GTLSE 157

Query: 107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFK----TGQTIFIVGGAGGV 161
           F+VV  + ++ KP++++  +AASLP    TA     K  G      TG+ + I+G +GGV
Sbjct: 158 FVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGV 217

Query: 162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE---DIEEKFDVLYD 218
           GT  IQ+ K +   +HV A  S    E V++LGAD VIDY+    E      + FD + D
Sbjct: 218 GTFAIQVMKAW--DAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSKPFDFILD 275

Query: 219 TIGDCKNS--------------------FVVAKDNAPIVD------IT---------WPP 243
            +G    +                    F++  D   I D      +T         W  
Sbjct: 276 NVGGSTETWALKFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKTLKHFWQG 335

Query: 244 SHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKV 303
            H R  ++    SG  L+ +   +E+GK++  I+ T P  F  V EAF  +E G ARGK 
Sbjct: 336 VHYR--WAFFMASGPCLDDIAELVEAGKIQPVIEKTFP--FSKVPEAFLKVERGHARGKT 391

Query: 304 VIS 306
           VI+
Sbjct: 392 VIN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Bos taurus (taxid: 9913)

>sp|Q924D0|RT4I1_MOUSE Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 173/363 (47%), Gaps = 73/363 (20%)

Query: 4   AWYYEEYGPKEVLKLG-DFPLPTPQH-DQLLVQVRAAALNPIDSKRR-----------QR 50
           AW  ++YG  EVL+   +  LP   + ++++++V AA++NPID   R           + 
Sbjct: 45  AWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRD 104

Query: 51  PLFPS----DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAE 106
           PL       +FP   G D++G+V+  G  V  F  GDEV+  +  +      KQ G L+E
Sbjct: 105 PLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPW------KQ-GTLSE 157

Query: 107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKT-----GQTIFIVGGAGGV 161
           F+VV  + ++ KPK+++  +AASLP    TA       G  +     G+   I+G +GGV
Sbjct: 158 FVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASGGV 217

Query: 162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK---FDVLYD 218
           GT  IQ+ K +   +HV A  S    E V++LGAD+VIDY     E+  +    FD + D
Sbjct: 218 GTFAIQVMKAW--GAHVTAVCSKDASELVRKLGADEVIDYTLGSVEEQLKSLKLFDFILD 275

Query: 219 TIGDCKNS--------------------FVVAKDNAPIVD------IT---------WPP 243
            +G    +                    F++  D   + D      +T         W  
Sbjct: 276 NVGGSTETWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGMLQTGVTVGTKALKHLWQG 335

Query: 244 SHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKV 303
            H R  ++    SG  L+++   +++GK++  I+ T P  F +V EAF  +E G ARGK 
Sbjct: 336 VHYR--WAFFMASGPYLDEIAELVDAGKIRPVIERTFP--FSEVPEAFLKVERGHARGKT 391

Query: 304 VIS 306
           V++
Sbjct: 392 VVN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Mus musculus (taxid: 10090)

>sp|Q7T3C7|RT4I1_DANRE Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2

 Score =  129 bits (324), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 174/361 (48%), Gaps = 69/361 (19%)

Query: 4   AWYYEEYGPKEVLKLG-DFPLPTPQH-DQLLVQVRAAALNPIDSKRR-----------QR 50
           AW  ++YG  +VL+   +  LP   + ++++V+V AA LNPID   R           + 
Sbjct: 31  AWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRD 90

Query: 51  PLFPS----DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAE 106
           PL  S    +FP + G D++G ++  G  V  F  GD+V+  I  +      KQ G+LAE
Sbjct: 91  PLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIPPW------KQ-GSLAE 143

Query: 107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQT----IFIVGGAGGV 161
           F+VV  + ++ KPK++  +EAAS+P    TA      T G     +    + I+GG+GGV
Sbjct: 144 FVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSGGV 203

Query: 162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE---DIEEKFDVLYD 218
           GT  IQ+ K +   +HV  T S      V++LGAD V+DY     E      EKFD++ D
Sbjct: 204 GTFAIQMVKAW--GAHVTVTCSQNAERLVRDLGADDVVDYTAGPVEKQLKNLEKFDLILD 261

Query: 219 TIGDCKNSFVV----AKDNAPIVDITWP--PSHPR------AIYSSLTV----------- 255
           +IG     + +        A  V +  P   +  R       + S++TV           
Sbjct: 262 SIGGETEKWALDLLKPWSGAKFVTLITPFLQNTDRLGLADGMMQSAVTVGCKVVKNLRKG 321

Query: 256 ----------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
                     SG  L+++   +++GK++  ++    + F  V EAF+ +E G ARGK V+
Sbjct: 322 VHYRWGFFAPSGSALDEVSEMVDAGKVRPVVEEV--FSFAQVPEAFQKVEQGHARGKTVV 379

Query: 306 S 306
           S
Sbjct: 380 S 380

May be a potent inhibitor of regeneration.

Danio rerio (taxid: 7955)

>sp|O42909|YBI2_SCHPO Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.02c PE=3 SV=1

 Score =  122 bits (306), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 157/345 (45%), Gaps = 53/345 (15%)

Query: 2   QNAWYYEEYG-PKEVLKL-GDFPLPTPQH---DQLLVQVRAAALNPIDSKRRQ------R 50
           ++AW Y   G PK+VL L     +P P       +LV+V A ++NP+D K         +
Sbjct: 12  KSAWLYNRTGKPKDVLYLEKGLHIPNPAELGPYDVLVEVVATSINPLDYKLMNTYQMIAK 71

Query: 51  PLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVV 110
            LF    P +PG D AG V+A G+ V +F+    V+G  Q F   G+  Q G+ A  IV 
Sbjct: 72  ALFK--LPNIPGYDFAGRVLAVGSEVKEFSATQRVWG-CQSFPRAGR--QGGSCATHIVT 126

Query: 111 EESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLA 169
            +  +   P  +SF E A   +A  TA E   +    K G  + I G +GGVGT  + LA
Sbjct: 127 GDKDVWHLPDGVSFNEGAGFGIAGLTAWEVLVRQMKVKPGTKLVIEGASGGVGTFAVALA 186

Query: 170 KHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVL--YDTIGDCKNSF 227
           K       V   +ST  ++  K LGA   +DY+K   +++ E+   L  YD + DC N  
Sbjct: 187 KAL--ECEVTTISSTENLDLCKSLGATHTLDYKK---DNLVERLADLGPYDFVFDCVNDN 241

Query: 228 VVAKDNAPIV-----------DITWP--------PSHPRAIYSS--------LTVSGEIL 260
           V+ + ++  V           DIT             PR +  S        L V  E+L
Sbjct: 242 VLYRASSKFVKPDGAFFGIGGDITLSYVGSRLSRTLRPRVLGGSSHSYYNILLHVDQEML 301

Query: 261 EKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
                F+    +K  ID    Y F+D +EAF  L T R +GKV+I
Sbjct: 302 RDFVDFVMKHNIKTVIDSV--YDFEDTVEAFNRLMTHRCKGKVII 344

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6GEP3|ZDH1_STAAR Zinc-type alcohol dehydrogenase-like protein SAR2277 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2277 PE=3 SV=1

 Score =  112 bits (279), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 113/204 (55%), Gaps = 17/204 (8%)

Query: 24  PTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGD 83
           PTP++D +LV+V + ++NP+D+K+RQ  +  +  P V G D  G V A G +VT F+ GD
Sbjct: 26  PTPENDDILVKVNSISVNPVDTKQRQMEV--TQAPRVLGFDAIGTVEAIGPNVTLFSPGD 83

Query: 84  EVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-- 141
            V+         G   + G+ A + +V E+++AK P NIS  EA SLPL   TA E F  
Sbjct: 84  VVF-------YAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFD 136

Query: 142 -----KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGAD 196
                       G+++ I+ GAGGVG++  Q+AK  YG + +   +     E+ +++GAD
Sbjct: 137 TFKISHNPSENIGKSVLIINGAGGVGSIATQIAKR-YGLTVITTASRQETTEWCEKMGAD 195

Query: 197 KVIDYRKTKYEDIEEKFDVLYDTI 220
            V+++++      +EK   L D I
Sbjct: 196 IVLNHKEDLVRQFKEKEIPLVDYI 219

Staphylococcus aureus (strain MRSA252) (taxid: 282458)

>sp|P99173|ZDH1_STAAN Zinc-type alcohol dehydrogenase-like protein SA1988 OS=Staphylococcus aureus (strain N315) GN=SA1988 PE=1 SV=1

 Score =  111 bits (278), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 112/204 (54%), Gaps = 17/204 (8%)

Query: 24  PTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGD 83
           PTP++D +LV+V + ++NP+D+K+RQ  +  +  P V G D  G V A G  VT F+ GD
Sbjct: 26  PTPENDDILVKVNSISVNPVDTKQRQMKV--TQAPRVLGFDAIGTVEAIGPDVTLFSPGD 83

Query: 84  EVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-- 141
            V+         G   + G+ A + +V E+++AK P NIS  EA SLPL   TA E F  
Sbjct: 84  VVF-------YAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFD 136

Query: 142 -----KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGAD 196
                       G+++ I+ GAGGVG++  Q+AK  YG + +   +     E+ +++GAD
Sbjct: 137 TFKISHNPSENVGKSVLIINGAGGVGSIATQIAKR-YGLTVITTASRQETTEWCEKMGAD 195

Query: 197 KVIDYRKTKYEDIEEKFDVLYDTI 220
            V+++++      +EK   L D I
Sbjct: 196 IVLNHKEDLVRQFKEKEIPLVDYI 219

Staphylococcus aureus (strain N315) (taxid: 158879)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
296089090	341	unnamed protein product [Vitis vinifera]	0.941	0.903	0.837	1e-148
255541360	338	alcohol dehydrogenase, putative [Ricinus	0.944	0.914	0.776	1e-135
357514739	342	Quinone oxidoreductase-like protein [Med	0.993	0.950	0.72	1e-130
357514779	339	Quinone oxidoreductase-like protein [Med	0.957	0.923	0.738	1e-129
358344325	304	Quinone oxidoreductase-like protein, par	0.856	0.921	0.733	1e-111
116781561	313	unknown [Picea sitchensis]	0.932	0.974	0.597	1e-97
116779756	310	unknown [Picea sitchensis] gi|224284411|	0.929	0.980	0.598	7e-94
116791542	310	unknown [Picea sitchensis] gi|224285635|	0.929	0.980	0.595	1e-93
148907702	318	unknown [Picea sitchensis]	0.926	0.952	0.584	2e-93
116791138	313	unknown [Picea sitchensis]	0.932	0.974	0.587	6e-92

>gi|296089090|emb|CBI38793.3| unnamed protein product [Vitis vinifera]

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/308 (83%), Positives = 276/308 (89%)

Query: 2   QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP 61
           Q AW+YEEYGPKEVLKLGDFPLPTP H+Q+LVQVRAAALNPID KRRQR +FPSDFP VP
Sbjct: 16  QKAWFYEEYGPKEVLKLGDFPLPTPAHNQILVQVRAAALNPIDFKRRQRAIFPSDFPVVP 75

Query: 62  GCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKN 121
           GCDMAG+VVA+G   TKF  GDEVYGNIQDFNAEGKLKQLG LA+FIVVEESL+A KPKN
Sbjct: 76  GCDMAGVVVARGDGATKFGIGDEVYGNIQDFNAEGKLKQLGTLAQFIVVEESLVALKPKN 135

Query: 122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
           ISFEEAASLPLA+QTAIEGF TAGFK GQT+FIVGGAGGVGTLVIQLAKH YGAS VVAT
Sbjct: 136 ISFEEAASLPLAIQTAIEGFVTAGFKGGQTVFIVGGAGGVGTLVIQLAKHLYGASEVVAT 195

Query: 182 TSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDITW 241
            STPKVEFVK LGADKV+DY KT YE+I EKFD LYDTIGD KNS VVAK +APIVDITW
Sbjct: 196 ASTPKVEFVKSLGADKVVDYTKTNYEEITEKFDFLYDTIGDTKNSHVVAKADAPIVDITW 255

Query: 242 PPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARG 301
           PPSHPRA+YSSLTV GE LEKLRP++ESGKLKA IDPTGPYKF  V+EAF YLETGRARG
Sbjct: 256 PPSHPRAVYSSLTVCGESLEKLRPYLESGKLKAIIDPTGPYKFTAVVEAFGYLETGRARG 315

Query: 302 KVVISAFP 309
           KVV+S FP
Sbjct: 316 KVVVSPFP 323

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541360|ref|XP_002511744.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223548924|gb|EEF50413.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/309 (77%), Positives = 280/309 (90%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAV 60
           MQ AW+Y E+GPKEVL+LGDFPLP P H+++LVQVRAAALNPID KRRQ+P+FPS+FP V
Sbjct: 1   MQKAWFYREHGPKEVLQLGDFPLPAPHHNEILVQVRAAALNPIDIKRRQKPVFPSEFPVV 60

Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
           PGCDM+G+VVAKG+ +TK+  GDEVYGNIQDFNA+G+LKQLG LAEFIVVEE  +AKKPK
Sbjct: 61  PGCDMSGVVVAKGSGMTKYCIGDEVYGNIQDFNADGQLKQLGTLAEFIVVEERFVAKKPK 120

Query: 121 NISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           N+SFEEAASLPLAVQTA+EGF  A FK GQ I +VGGAGGVG+LV+QLAKHFYGAS+VVA
Sbjct: 121 NLSFEEAASLPLAVQTAMEGFMNADFKKGQNICVVGGAGGVGSLVVQLAKHFYGASYVVA 180

Query: 181 TTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
           TTST K+EFV+ LGADKV+DY  T Y+DI+EK+D +YDTIGD KNSFVVAKDNAPI+DIT
Sbjct: 181 TTSTSKMEFVQSLGADKVVDYTNTGYKDIKEKYDFVYDTIGDSKNSFVVAKDNAPIIDIT 240

Query: 241 WPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRAR 300
           WPPS+P A+YS+LTVSGE LEKLRP++E+GKLKA IDPTGPYKF DVIEAFR+LETGRAR
Sbjct: 241 WPPSNPVAVYSALTVSGENLEKLRPYLETGKLKAVIDPTGPYKFMDVIEAFRHLETGRAR 300

Query: 301 GKVVISAFP 309
           GKVVIS++P
Sbjct: 301 GKVVISSYP 309

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357514739|ref|XP_003627658.1| Quinone oxidoreductase-like protein [Medicago truncatula] gi|217075172|gb|ACJ85946.1| unknown [Medicago truncatula] gi|355521680|gb|AET02134.1| Quinone oxidoreductase-like protein [Medicago truncatula] gi|388507594|gb|AFK41863.1| unknown [Medicago truncatula] gi|388519617|gb|AFK47870.1| unknown [Medicago truncatula]

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/325 (72%), Positives = 276/325 (84%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAV 60
           MQ AW+YEEYGPKEVLKLGDFP+P+P  +QLLVQV AAALNPIDSKRR RP+FPSDFPAV
Sbjct: 3   MQKAWFYEEYGPKEVLKLGDFPIPSPLENQLLVQVYAAALNPIDSKRRMRPIFPSDFPAV 62

Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
           PGCDMAG+V+ KG +V KF+ GDEVYGNIQDFN+  K KQLG LA+FIVVEE+L+A+KPK
Sbjct: 63  PGCDMAGVVIGKGVNVKKFDIGDEVYGNIQDFNSMEKPKQLGTLAQFIVVEENLVARKPK 122

Query: 121 NISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
            +SFEEAASLPLAVQTAIEGFKT  FK G+T+F+VGGAGGVGTLV+QLAK  +GAS+VV+
Sbjct: 123 RLSFEEAASLPLAVQTAIEGFKTGDFKKGETMFVVGGAGGVGTLVLQLAKLMFGASYVVS 182

Query: 181 TTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
           + STPK++FVK+ GADKV+DY KTKYEDIEEKFD +YDT+GDCK SFVVAK +  IVDIT
Sbjct: 183 SCSTPKLKFVKQFGADKVVDYTKTKYEDIEEKFDFIYDTVGDCKKSFVVAKKDGAIVDIT 242

Query: 241 WPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRAR 300
           WP SH RA+YSSLTV GEILEKLRP++E G+LKA IDP G Y F++VI+AF Y+ETGRA 
Sbjct: 243 WPASHERAVYSSLTVCGEILEKLRPYLERGELKAVIDPKGEYDFENVIDAFGYIETGRAW 302

Query: 301 GKVVISAFPYTESTRCHFIREQEET 325
           GKVV++ FP     R   I  + +T
Sbjct: 303 GKVVVTCFPMAPKDRHSTILSEIDT 327

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357514779|ref|XP_003627678.1| Quinone oxidoreductase-like protein [Medicago truncatula] gi|358344451|ref|XP_003636303.1| Quinone oxidoreductase-like protein [Medicago truncatula] gi|358345549|ref|XP_003636839.1| Quinone oxidoreductase-like protein [Medicago truncatula] gi|355502238|gb|AES83441.1| Quinone oxidoreductase-like protein [Medicago truncatula] gi|355502774|gb|AES83977.1| Quinone oxidoreductase-like protein [Medicago truncatula] gi|355521700|gb|AET02154.1| Quinone oxidoreductase-like protein [Medicago truncatula]

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/314 (73%), Positives = 272/314 (86%), Gaps = 1/314 (0%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAV 60
           MQ AW+YEEYGPKEVLKLGDFP+P+P  +QLLVQV AAALNPIDSKRR RP+FPS+FPAV
Sbjct: 3   MQKAWFYEEYGPKEVLKLGDFPIPSPLENQLLVQVHAAALNPIDSKRRMRPIFPSEFPAV 62

Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
           PGCDMAG+V+ KG +V KF+ GDEVYGNIQDFN+  K KQLG LA+FIVVEE L+A+KPK
Sbjct: 63  PGCDMAGVVIGKGVNVKKFDIGDEVYGNIQDFNSMEKPKQLGTLAQFIVVEEKLVARKPK 122

Query: 121 NISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
            +SFEEAASLPLAVQTAIEGFKT  FK G+T+F+VGGAGGVGTLV+QLAK  +GAS+VV+
Sbjct: 123 CLSFEEAASLPLAVQTAIEGFKTGDFKKGETMFVVGGAGGVGTLVLQLAKLMFGASYVVS 182

Query: 181 TTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
           + STPK++FVK+ GADKV+DY KTKYEDIEEKFD LYDT+GDCK SFVVAK +  IVDIT
Sbjct: 183 SCSTPKLKFVKQFGADKVVDYTKTKYEDIEEKFDFLYDTVGDCKKSFVVAKKDGAIVDIT 242

Query: 241 WPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRAR 300
           WP SH RA+YSSLTV GEILEKLRP++E G+LKA IDP G Y F++VI+AF Y+ETGRA 
Sbjct: 243 WPASHERAVYSSLTVCGEILEKLRPYLERGELKAVIDPKGEYDFENVIDAFGYIETGRAW 302

Query: 301 GKVVISAFPYTEST 314
           GKVV++  P+  ST
Sbjct: 303 GKVVVT-IPHHHST 315

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358344325|ref|XP_003636240.1| Quinone oxidoreductase-like protein, partial [Medicago truncatula] gi|355502175|gb|AES83378.1| Quinone oxidoreductase-like protein, partial [Medicago truncatula]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/281 (73%), Positives = 242/281 (86%), Gaps = 1/281 (0%)

Query: 34  QVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFN 93
           QV AAALNPIDSKRR RP+FPS+FPAVPGCDMAG+V+ KG +V KF+ GDEVYGNIQDFN
Sbjct: 1   QVHAAALNPIDSKRRMRPIFPSEFPAVPGCDMAGVVIGKGVNVKKFDIGDEVYGNIQDFN 60

Query: 94  AEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIF 153
           +  K KQLG LA+FIVVEE L+A+KPK +SFEEAASLPLAVQTAIEGFKT  FK G+T+F
Sbjct: 61  SMEKPKQLGTLAQFIVVEEKLVARKPKCLSFEEAASLPLAVQTAIEGFKTGDFKKGETMF 120

Query: 154 IVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKF 213
           +VGGAGGVGTLV+QLAK  +GAS+VV++ STPK++FVK+ GADKV+DY KTKYEDIEEKF
Sbjct: 121 VVGGAGGVGTLVLQLAKLMFGASYVVSSCSTPKLKFVKQFGADKVVDYTKTKYEDIEEKF 180

Query: 214 DVLYDTIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK 273
           D LYDT+GDCK SFVVAK +  IVDITWP SH RA+YSSLTV GEILEKLRP++E G+LK
Sbjct: 181 DFLYDTVGDCKKSFVVAKKDGAIVDITWPASHERAVYSSLTVCGEILEKLRPYLERGELK 240

Query: 274 AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYTEST 314
           A IDP G Y F++VI+AF Y+ETGRA GKVV++  P+  ST
Sbjct: 241 AVIDPKGEYDFENVIDAFGYIETGRAWGKVVVT-IPHHHST 280

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116781561|gb|ABK22154.1| unknown [Picea sitchensis]

 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 184/308 (59%), Positives = 227/308 (73%), Gaps = 3/308 (0%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPS--DFP 58
           MQ AW+Y EYGP+ VL+ GDFP+P     Q+LV+VRAAALNP+D K R      +  +FP
Sbjct: 4   MQKAWFYNEYGPRAVLQYGDFPVPQLGDTQVLVRVRAAALNPVDFKLRNGVFKDTGLEFP 63

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
            VPGCD+AG++V +G +V+ F+ GDEVYGNIQ FN  G  KQ G L ++  VEESLIA K
Sbjct: 64  VVPGCDVAGVIVDEGDNVSMFSKGDEVYGNIQSFNTVGP-KQYGTLTQYTAVEESLIALK 122

Query: 119 PKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
           P+N+SFEEAAS PLA+QTA EGF  A F+ GQT+FIVGG GGVG+L IQLAK+ YGAS +
Sbjct: 123 PENMSFEEAASFPLALQTAQEGFDRAKFQRGQTVFIVGGEGGVGSLAIQLAKYVYGASKI 182

Query: 179 VATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVD 238
             TTS  KV+FVK+LG D VIDY K  Y+ I EKFD ++DTIGD   S+VVAK+   I+D
Sbjct: 183 ATTTSPGKVDFVKKLGPDMVIDYTKKSYDQILEKFDFVFDTIGDSHRSYVVAKEEGKIID 242

Query: 239 ITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGR 298
           I     HPRA +  +T SG  LE+LR +IE  KLK  IDPTGPY F +V+EAF++LE+GR
Sbjct: 243 IANSSPHPRAEFYIVTPSGSNLERLRSYIECEKLKPVIDPTGPYAFSNVMEAFKHLESGR 302

Query: 299 ARGKVVIS 306
           ARGKVVIS
Sbjct: 303 ARGKVVIS 310

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116779756|gb|ABK21418.1| unknown [Picea sitchensis] gi|224284411|gb|ACN39940.1| unknown [Picea sitchensis]

 Score =  350 bits (897), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 185/309 (59%), Positives = 230/309 (74%), Gaps = 5/309 (1%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPS---DF 57
           MQ AW+Y EYG  +VL+ G+FP+P P   ++L+++RAAALNP+D K+R+  LF S   DF
Sbjct: 1   MQKAWFYNEYGSIDVLQFGEFPVPKPGPGEILLKIRAAALNPVDYKKREG-LFRSADCDF 59

Query: 58  PAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
           PAVPGCD AG+VV  G  V+K   GDEVY +IQ F A G+ KQLG LA++ VVEE L+A 
Sbjct: 60  PAVPGCDAAGVVVEVGDGVSKLKIGDEVYSDIQHFTA-GRPKQLGTLAQYTVVEEHLVAP 118

Query: 118 KPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           KP N+SFEEAASLPLAV TA E F  A F+ GQ++FIVGGAGGVG+L IQLAKH YGAS 
Sbjct: 119 KPTNLSFEEAASLPLAVLTAQEAFDIAKFEKGQSVFIVGGAGGVGSLAIQLAKHVYGASR 178

Query: 178 VVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIV 237
           +V+T ST K++FVK LGAD VIDY K  Y+ I EKFD ++DTIG+   S VVAK+ A ++
Sbjct: 179 IVSTASTGKLDFVKSLGADLVIDYTKQSYDQISEKFDFVFDTIGESAKSHVVAKEEAKVL 238

Query: 238 DITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETG 297
           DI     HPRA +  ++ SG  LEKL+P+IES KLK  IDP  PY F DVIEAF++ E+G
Sbjct: 239 DIASFQPHPRAEFFLVSPSGHNLEKLQPYIESEKLKPVIDPKSPYSFSDVIEAFKHQESG 298

Query: 298 RARGKVVIS 306
           RARGK+VIS
Sbjct: 299 RARGKIVIS 307

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116791542|gb|ABK26019.1| unknown [Picea sitchensis] gi|224285635|gb|ACN40536.1| unknown [Picea sitchensis]

 Score =  349 bits (895), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 184/309 (59%), Positives = 230/309 (74%), Gaps = 5/309 (1%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPS---DF 57
           MQ AW+Y EYG  +VL+ G+FP+P P   ++L+++RAAALNP+D K+R+  LF S   DF
Sbjct: 1   MQKAWFYNEYGSIDVLQFGEFPVPKPGPGEILLKIRAAALNPVDYKKREG-LFRSADCDF 59

Query: 58  PAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
           PAVPGCD AG+VV  G  V+KF  GDEVY +IQ F A G+ KQLG LA++ VVEE L+A 
Sbjct: 60  PAVPGCDAAGVVVEVGDGVSKFKIGDEVYSDIQHFTA-GRPKQLGTLAQYTVVEEHLVAP 118

Query: 118 KPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           KP N+SFEEAASLPLAV TA E F  A F+ GQ++FIVGGAGGVG+L IQLAKH YGAS 
Sbjct: 119 KPTNLSFEEAASLPLAVLTAQEAFDIAKFEKGQSVFIVGGAGGVGSLAIQLAKHVYGASR 178

Query: 178 VVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIV 237
           +V+T ST K++FVK LGAD VIDY K  Y+ I EKFD ++DTIG+   S VVAK+ A ++
Sbjct: 179 IVSTASTGKLDFVKSLGADLVIDYTKQSYDQISEKFDFVFDTIGEAAKSHVVAKEEAKVL 238

Query: 238 DITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETG 297
           DI     HPRA +  ++ S   LEKL+P+IES KLK  IDP  PY F DVIEAF++ E+G
Sbjct: 239 DIASFQPHPRAEFFLVSPSAHNLEKLQPYIESEKLKPVIDPKSPYSFSDVIEAFKHQESG 298

Query: 298 RARGKVVIS 306
           RA+GK+VIS
Sbjct: 299 RAKGKIVIS 307

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148907702|gb|ABR16979.1| unknown [Picea sitchensis]

 Score =  348 bits (893), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 186/318 (58%), Positives = 235/318 (73%), Gaps = 15/318 (4%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPS---DF 57
           MQ AW+Y EYG  +VL+ G+FP+P P   ++L+++RAAALNP+D K+R+  LF S   DF
Sbjct: 1   MQKAWFYNEYGSIDVLQFGEFPVPKPGPGEILLKIRAAALNPVDYKKREG-LFRSADCDF 59

Query: 58  PAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
           PAVPGCD AG+VV  G  V+KF  GDEVY +IQ+F A G+ KQLG LA++ +VEE L+A 
Sbjct: 60  PAVPGCDAAGVVVEVGDGVSKFKIGDEVYSDIQNFTA-GRPKQLGTLAQYTLVEEHLVAP 118

Query: 118 KPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           KP N+SFEEAASLPLAV TA E F  A F+ GQ++FIVGGAGGVG+L IQLAKH YGAS 
Sbjct: 119 KPTNLSFEEAASLPLAVLTAQEAFDIAKFEKGQSVFIVGGAGGVGSLAIQLAKHVYGASR 178

Query: 178 VVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIV 237
           +V+T ST K++FVK LGAD VIDY K  Y+ I EKFD ++DTIG+   S VVAK+ A ++
Sbjct: 179 IVSTASTGKLDFVKSLGADLVIDYTKQSYDQISEKFDFVFDTIGEAAKSHVVAKEEAKVL 238

Query: 238 DI---------TWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVI 288
           DI         ++ P HPRA +  ++ S   LEKL+P+IES KLK  IDP  PY F DVI
Sbjct: 239 DIGVAKEDDMASFQP-HPRAEFFLVSSSAHNLEKLQPYIESEKLKPVIDPKSPYSFSDVI 297

Query: 289 EAFRYLETGRARGKVVIS 306
           EAF++LE+GRARGK+VIS
Sbjct: 298 EAFKHLESGRARGKIVIS 315

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116791138|gb|ABK25870.1| unknown [Picea sitchensis]

 Score =  343 bits (880), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 181/308 (58%), Positives = 226/308 (73%), Gaps = 3/308 (0%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRR--QRPLFPSDFP 58
           +Q AW+Y EYG  +VL+ G+ P+PTP   QLLV++RAAALNP+D KRR  +  +  SDFP
Sbjct: 4   LQKAWFYNEYGSIDVLQFGEVPVPTPGPGQLLVKIRAAALNPVDFKRRDGRIRIADSDFP 63

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
            VPGCD AG+VV  G  V+KF  GDEVY +IQ+F   GK KQ G LA++ VVEE L+A K
Sbjct: 64  TVPGCDAAGVVVEVGDGVSKFKNGDEVYSDIQNF-VVGKRKQWGTLAQYTVVEEYLVAPK 122

Query: 119 PKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
           P N+SFEEAASLPLA+ TA + F  A F+ G+++FIVGGAGGVG+L IQLA+H Y AS +
Sbjct: 123 PTNLSFEEAASLPLALLTAQQAFDIAKFEKGKSVFIVGGAGGVGSLAIQLARHVYEASKI 182

Query: 179 VATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVD 238
           V+T ST K++FVK LGAD VIDY K  Y+ I EKFD ++DTIGD   S VVAK+ A I+D
Sbjct: 183 VSTASTGKLDFVKNLGADLVIDYTKQSYDQISEKFDFVFDTIGDSSKSHVVAKEEAKILD 242

Query: 239 ITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGR 298
           I     H R  +  L+  G+ LEKL+P+IESGKLK  IDP  PY F DVIEAF++ E+GR
Sbjct: 243 IASFQPHSRIEFFRLSPHGQNLEKLQPYIESGKLKPVIDPKSPYSFSDVIEAFKHQESGR 302

Query: 299 ARGKVVIS 306
           ARGK+VIS
Sbjct: 303 ARGKIVIS 310

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
TAIR|locus:2034802	386	AOR "alkenal/one oxidoreductas	0.929	0.787	0.495	1.9e-74
TIGR_CMR|BA_3438	335	BA_3438 "alcohol dehydrogenase	0.703	0.686	0.386	2.5e-43
TIGR_CMR|BA_3435	317	BA_3435 "alcohol dehydrogenase	0.880	0.908	0.374	4.5e-43
TIGR_CMR|BA_3566	332	BA_3566 "alcohol dehydrogenase	0.908	0.894	0.334	1.1e-37
TIGR_CMR|CPS_0991	325	CPS_0991 "oxidoreductase, zinc	0.727	0.732	0.359	5.7e-36
TIGR_CMR|BA_0176	302	BA_0176 "alcohol dehydrogenase	0.847	0.917	0.340	1.1e-34
UNIPROTKB|Q8WWV3	396	RTN4IP1 "Reticulon-4-interacti	0.639	0.527	0.341	2.7e-34
ZFIN|ZDB-GENE-040426-1314	387	rtn4ip1 "reticulon 4 interacti	0.639	0.540	0.362	3.4e-34
UNIPROTKB|Q0VC50	396	RTN4IP1 "Reticulon-4-interacti	0.639	0.527	0.333	4.4e-34
UNIPROTKB|F6V4D2	426	RTN4IP1 "Uncharacterized prote	0.639	0.490	0.337	5.6e-34

TAIR|locus:2034802 AOR "alkenal/one oxidoreductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
 Identities = 153/309 (49%), Positives = 205/309 (66%)

Query:     4 AWYYEEYGPKEVLKL-GDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSD--FPAV 60
             AW Y +YG  +VLKL  +  +P  + DQ+L++V AAALNP+D+KRRQ     +D   P V
Sbjct:    80 AWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPLPTV 139

Query:    61 PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
             PG D+AG+VV  G++V     GDEVY N+ +   EG  KQ G+LAE+  VEE L+A KPK
Sbjct:   140 PGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGP-KQFGSLAEYTAVEEKLLALKPK 198

Query:   121 NISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
             NI F +AA LPLA++TA EG     F  G++I ++ GAGGVG+LVIQLAKH YGAS V A
Sbjct:   199 NIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKVAA 258

Query:   181 TTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
             T ST K+E V+ LGAD  IDY K   ED+ +K+DV++D IG C  +  V K+   +V +T
Sbjct:   259 TASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKVVALT 318

Query:   241 WPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRAR 300
                + P   +  +T +G++L+KL P+IESGK+K  +DP GP+ F  V +AF YLET  A 
Sbjct:   319 GAVTPPGFRFV-VTSNGDVLKKLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLETNHAT 377

Query:   301 GKVVISAFP 309
             GKVV+   P
Sbjct:   378 GKVVVYPIP 386

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0010319 "stromule" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0035671 "enone reductase activity" evidence=IDA

GO:0035798 "2-alkenal reductase (NADP+) activity" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

TIGR_CMR|BA_3438 BA_3438 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 375 (137.1 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 97/251 (38%), Positives = 136/251 (54%)

Query:    10 YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--FPSDFPAVPGCDMAG 67
             +G   V +L +   P      +L+ V+A ++NPID+K R   +     +FPA+   D+AG
Sbjct:     9 FGDSSVFQLEEVSKPKLLPGHVLIDVKATSVNPIDTKMRSGAVSAVAPEFPAILHGDVAG 68

Query:    68 IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEA 127
             IV+  G  V+KF  GDEVYG    F   G     GALAEF++ +  LIA KP NI+ EEA
Sbjct:    69 IVIEVGEGVSKFKCGDEVYGCAGGFKETG-----GALAEFMLADARLIAHKPNNITMEEA 123

Query:   128 ASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK 186
             A+LPL   TA E  F  A  K+GQ + I G  GGVG + IQLAK + GA+     +   K
Sbjct:   124 AALPLVAITAWESLFDRANIKSGQNVLIHGATGGVGHVAIQLAK-WAGANVFTTASQQNK 182

Query:   187 VEFVKELGADKVIDYRKTKY-EDIEEK---------FDVLYDTIG--DCKNSFVVAKDNA 234
             +E    LGAD  I+Y++    E ++E          F+V++DT+G  +  NSF  A  N 
Sbjct:   183 MEIAHRLGADVAINYKEESVQESVQEYVQKHTNGNGFEVIFDTVGGKNLDNSFEAAAVNG 242

Query:   235 PIVDITWPPSH 245
              +V I    +H
Sbjct:   243 TVVTIAARSTH 253

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|BA_3435 BA_3435 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 118/315 (37%), Positives = 175/315 (55%)

Query:     9 EYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSDFPAVPGCDM 65
             +YG K VL+  +   P    + +L++V AA +NP+D K R+   + +   DFP V G D+
Sbjct:     8 QYGDKSVLQEIEMQTPLLGDNDVLIEVYAAGVNPVDWKIREGLLQDVISYDFPLVLGWDV 67

Query:    66 AGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFE 125
             AG+V A G +VT F  GDEVY    D      +++ G  AE++ V+E  +AKKP+N+SFE
Sbjct:    68 AGVVAAIGKNVTVFKVGDEVYSR-PD------IERNGTYAEYVAVDEKYVAKKPRNLSFE 120

Query:   126 EAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184
             EAAS+PL   T+ +   K A  + G  + I  G+GG+GT  IQLAK F GA HV  TTST
Sbjct:   121 EAASIPLVGLTSWQSLVKFANVQKGNKVLIHAGSGGIGTFAIQLAKSF-GA-HVATTTST 178

Query:   185 PKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD--CKNSFVVAKDNAPIVDITWP 242
               ++FVK+LGAD V+DY+   +  +   +++++D +G    K+S+ V   N  +  I  P
Sbjct:   179 KNMQFVKDLGADTVVDYKTEDFSLLLHNYNIVFDVLGGDVLKDSYKVLAPNGKLASIYGP 238

Query:   243 -----P----SHPRAIYSS--LTV-SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEA 290
                  P    S  + I S    T  +G  L  +   IE GK+K  +    P   + V +A
Sbjct:   239 KGMEIPQTEISREKNIESDHIFTEPNGYELSLITELIEGGKIKPVVTHVLPLHVEGVKKA 298

Query:   291 FRYLETGRARGKVVI 305
                 E+ RARGK+V+
Sbjct:   299 HHISESERARGKIVL 313

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|BA_3566 BA_3566 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 109/326 (33%), Positives = 171/326 (52%)

Query:     4 AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSDFPAV 60
             A   ++YG K  +++ + P+P     ++L ++ AA++NPID K R    + L   + P +
Sbjct:     3 AMIIDKYG-KVPMRMAEVPIPEINEHEVLAEIHAASINPIDFKIRDGKVKMLLKYEMPLI 61

Query:    61 PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
              G D AG+++  G+ VT+F  GDE+Y       A  +  ++G  AE+I + E  IA KPK
Sbjct:    62 LGNDFAGVIIKVGSKVTRFKIGDEIY-------ARPRKNKIGTFAEYIAIHEDDIALKPK 114

Query:   121 NISFEEAASLPLAVQTAIEGFKTA-GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVV 179
             N+SFEEAAS+PL   T+ +        +  Q I I  G+GGVGT  IQLAK   GA+ V 
Sbjct:   115 NLSFEEAASIPLVGLTSYQALHDIMQLQKDQKILIHAGSGGVGTFAIQLAK-IMGAT-VT 172

Query:   180 ATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--KNSFVVAKDNAPIV 237
              T S    + VK LGAD++I+Y+  K+E+I + +D ++DTIG    + SF + K    IV
Sbjct:   173 TTASEAGPDLVKSLGADQIINYKTEKFEEILKDYDAVFDTIGGTTLEKSFDIIKSGGNIV 232

Query:   238 DITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKA-QIDPTGPYKFK------DVIEA 290
              ++     P A +S    SG   +     + S KL A +      Y F       D +  
Sbjct:   233 SVS---GIPNARFSKEFGSG-FFKTFLFSLASKKLTALEKKHNAQYSFLFMKPSGDQLRT 288

Query:   291 F-RYLETGRARGKVVISAFPYTESTR 315
                Y+E G+ +  V+   FP+ ++ +
Sbjct:   289 IANYIEAGKIK-PVIDRVFPFEDAQK 313

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|CPS_0991 CPS_0991 "oxidoreductase, zinc-binding" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 336 (123.3 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
 Identities = 92/256 (35%), Positives = 135/256 (52%)

Query:     4 AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FPSDFPAVPG 62
             A   +E G  EV +L +   P  +   ++V+V+A ++NPID+  R   L + ++ P +  
Sbjct:     3 AMIIKEIGSTEVFQLAEKAKPVAKAGHMVVEVKATSVNPIDTMLRSIELPWSANLPEILH 62

Query:    63 CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNI 122
              D+AGIV   G  VT FN GDEVYG     N        GALAEF++V+  L+A KPK +
Sbjct:    63 GDVAGIVCEVGEGVTGFNVGDEVYGMAGGINGVD-----GALAEFMLVDALLMANKPKTL 117

Query:   123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
             + ++AA+LPL   T+ E   +    + G  + I G  GGVG + +QLAK   GA+ V +T
Sbjct:   118 TMKQAAALPLVAITSYEALVEKMNVQQGDKVLIHGATGGVGHIAVQLAK-VLGAN-VTST 175

Query:   182 TSTPKVEFVKELGADKVIDYRKTKYEDIEEK------FDVLYDTI-GD-CKNSFVVAKDN 233
              S+      K LGAD ++DY+     D          FD ++DT+ GD  + SF  AK N
Sbjct:   176 YSSANEVLAKTLGADNLVDYKTESVADYVRAYTDGIGFDKVFDTVAGDNIEKSFEAAKLN 235

Query:   234 APIVDITWPPSHPRAI 249
               +  I  P + P  I
Sbjct:   236 GHVATIL-PIADPLQI 250

GO:0008152 "metabolic process" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

TIGR_CMR|BA_0176 BA_0176 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 107/314 (34%), Positives = 162/314 (51%)

Query:     9 EYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRR--QRPLF---PSDF------ 57
             +YGP  VL+L +   P P+ +++LV++ A +++  D + R    PL    P         
Sbjct:     8 QYGPPNVLQLQNIEKPIPKKNEVLVKIHATSVSTGDCRIRGFNSPLLFWIPMRLILGLRK 67

Query:    58 PAVP--GCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEES-L 114
             P  P  G ++AG +   GT VT+F  GD+++  + + N       LG  AE+  V ES L
Sbjct:    68 PRNPILGVELAGEIEDIGTDVTQFKKGDQIFA-LTELN-------LGGYAEYTCVHESGL 119

Query:   115 IAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
             I  KP N+++EEAA +P    +A+   + +  K GQ + I G +G VGT  IQLAK+F G
Sbjct:   120 ITLKPTNVTYEEAAVIPFGGTSALHFLRKSRIKKGQQVLIYGASGSVGTAAIQLAKYF-G 178

Query:   175 ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFV--VAKD 232
             A+ V A  S    E V+ LGADKVIDY K  +    E++D+++D +G  K S    V   
Sbjct:   179 AT-VTAVCSNSNFELVQSLGADKVIDYTKEDFTKRRERYDIIFDAVGKHKKSLCKQVLAP 237

Query:   233 NAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR 292
             N   V +    +          VS E +  L+   E+  LK  ID T  Y+ +++ EA  
Sbjct:   238 NGKYVSVNGMMAK---------VSKEDMILLKKLTETEHLKPVIDRT--YRLEEIAEAHM 286

Query:   293 YLETGRARGKVVIS 306
             Y+E G  +G V I+
Sbjct:   287 YVEIGHKKGNVSIT 300

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

UNIPROTKB|Q8WWV3 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 292 (107.8 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
 Identities = 83/243 (34%), Positives = 130/243 (53%)

Query:     4 AWYYEEYGPKEVLKLG-DFPLPTPQH-DQLLVQVRAAALNPIDSKRR-----------QR 50
             AW  ++YG  EVL+   +  +P   + ++++V+V AA++NPID   R           + 
Sbjct:    45 AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 104

Query:    51 PLFPS----DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAE 106
             PL       +FP   G D++G+V+  G  V  F  GDEV+  +  +      KQ G L+E
Sbjct:   105 PLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPW------KQ-GTLSE 157

Query:   107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFK----TGQTIFIVGGAGGV 161
             F+VV  + ++ KPK+++  +AASLP    TA     K  G      TG+ + I+G +GGV
Sbjct:   158 FVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGV 217

Query:   162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED-IE--EKFDVLYD 218
             GT  IQ+ K +   +HV A  S    E V++LGAD VIDY+    E+ ++  + FD + D
Sbjct:   218 GTFAIQVMKAW--DAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILD 275

Query:   219 TIG 221
              +G
Sbjct:   276 NVG 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

ZFIN|ZDB-GENE-040426-1314 rtn4ip1 "reticulon 4 interacting protein 1" [Danio rerio (taxid:7955)]

 Score = 297 (109.6 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
 Identities = 88/243 (36%), Positives = 133/243 (54%)

Query:     4 AWYYEEYGPKEVLKLG-DFPLPTPQH-DQLLVQVRAAALNPID-SKR----------RQR 50
             AW  ++YG  +VL+   +  LP   + ++++V+V AA LNPID S R          ++ 
Sbjct:    31 AWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRD 90

Query:    51 PLFPS----DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAE 106
             PL  S    +FP + G D++G ++  G  V  F  GD+V+  I  +      KQ G+LAE
Sbjct:    91 PLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIPPW------KQ-GSLAE 143

Query:   107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQT----IFIVGGAGGV 161
             F+VV  + ++ KPK++  +EAAS+P    TA      T G     +    + I+GG+GGV
Sbjct:   144 FVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSGGV 203

Query:   162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE-DIE--EKFDVLYD 218
             GT  IQ+ K  +GA HV  T S      V++LGAD V+DY     E  ++  EKFD++ D
Sbjct:   204 GTFAIQMVKA-WGA-HVTVTCSQNAERLVRDLGADDVVDYTAGPVEKQLKNLEKFDLILD 261

Query:   219 TIG 221
             +IG
Sbjct:   262 SIG 264

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q0VC50 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 288 (106.4 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
 Identities = 81/243 (33%), Positives = 127/243 (52%)

Query:     4 AWYYEEYGPKEVLKLG-DFPLPTPQH-DQLLVQVRAAALNPIDSKRR-----------QR 50
             AW  ++YG  EVL+   +  +P   + ++++++V AA++NPID   R           + 
Sbjct:    45 AWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNMKRD 104

Query:    51 PLFPS----DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAE 106
             PL       +FP   G D++G+V+  G  V  F  GDEV+  +  +      KQ G L+E
Sbjct:   105 PLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPW------KQ-GTLSE 157

Query:   107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFK----TGQTIFIVGGAGGV 161
             F+VV  + ++ KP++++  +AASLP    TA     K  G      TG+ + I+G +GGV
Sbjct:   158 FVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGV 217

Query:   162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE---DIEEKFDVLYD 218
             GT  IQ+ K +   +HV A  S    E V++LGAD VIDY+    E      + FD + D
Sbjct:   218 GTFAIQVMKAW--DAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSKPFDFILD 275

Query:   219 TIG 221
              +G
Sbjct:   276 NVG 278

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F6V4D2 RTN4IP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 291 (107.5 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
 Identities = 82/243 (33%), Positives = 130/243 (53%)

Query:     4 AWYYEEYGPKEVLKLG-DFPLPTPQH-DQLLVQVRAAALNPIDSKRR-----------QR 50
             AW  ++YG  EVL+   +  +P   + ++++++V AA++NPID   R           + 
Sbjct:    75 AWVIDKYGKNEVLRFTQNMMIPVIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRD 134

Query:    51 PLF----PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAE 106
             PL       +FP   G D++G+V+  G  V  F  GDEV+  +  +      KQ G L+E
Sbjct:   135 PLHIKTKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPW------KQ-GTLSE 187

Query:   107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFK----TGQTIFIVGGAGGV 161
             F+VV  + ++ KPK+++  +AASLP    TA     K  G      TG+ + I+G +GGV
Sbjct:   188 FVVVNGNEVSLKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGV 247

Query:   162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED-IE--EKFDVLYD 218
             GT  IQ+ K +   +HV A  S    E V++LGAD VIDY+    E+ ++  + FD + D
Sbjct:   248 GTFAIQVMKAW--DAHVTAVCSQDASELVRKLGADDVIDYKSGNVEEQLKSLKPFDFILD 305

Query:   219 TIG 221
              +G
Sbjct:   306 NVG 308

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O42909	YBI2_SCHPO	1, ., -, ., -, ., -	0.3159	0.8929	0.8414	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00026262001 SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (329 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	327
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-109
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-98
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	8e-92
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	2e-74
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	8e-71
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	2e-61
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-59
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	8e-59
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	3e-57
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-55
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-53
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-51
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	2e-50
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-50
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-49
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-48
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	4e-47
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	2e-46
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	8e-45
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	4e-38
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-37
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	4e-37
smart00829	287	smart00829, PKS_ER, Enoylreductase	8e-37
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	3e-36
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	4e-36
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-35
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	7e-35
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	9e-34
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	9e-32
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	2e-31
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	3e-31
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	2e-29
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	2e-27
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	4e-27
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	5e-27
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	9e-27
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	1e-26
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	2e-26
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	4e-26
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	8e-26
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-25
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-24
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	3e-23
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	4e-23
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	2e-22
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-22
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	3e-22
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	4e-22
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	4e-22
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	5e-22
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	5e-21
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	5e-21
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	3e-20
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	6e-20
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	3e-19
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	5e-19
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	8e-19
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-18
cd05281	341	cd05281, TDH, Threonine dehydrogenase	2e-18
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	5e-18
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	6e-18
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-17
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	3e-17
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	9e-17
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	2e-16
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	6e-16
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	8e-16
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-15
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	5e-15
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	3e-14
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	4e-14
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	3e-13
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	7e-13
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	1e-12
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	2e-12
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	2e-12
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	3e-12
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	7e-12
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-11
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	2e-11
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	4e-11
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	4e-11
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	8e-11
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	1e-10
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	2e-10
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	5e-10
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	7e-10
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	2e-09
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	2e-08
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	2e-08
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	3e-08
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-07
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	1e-07
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-07
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	4e-07
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	5e-07
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	8e-07
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	2e-06
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-06
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	1e-05
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	2e-05
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	2e-05
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	4e-05
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	5e-05
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	5e-05
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	8e-05
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	1e-04
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	1e-04
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	1e-04
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	5e-04
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	8e-04
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	0.003

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  319 bits (819), Expect = e-109
 Identities = 131/318 (41%), Positives = 175/318 (55%), Gaps = 27/318 (8%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSDFPAV 60
           A    EYG  EVL+L D P P P   ++LV+V AA +NP+D K R+   +  FP   P +
Sbjct: 3   AVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLI 62

Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
           PG D+AG+VVA G  VT F  GDEV+G            + GA AE++VV    +A KP 
Sbjct: 63  PGHDVAGVVVAVGPGVTGFKVGDEVFGMTP-------FTRGGAYAEYVVVPADELALKPA 115

Query: 121 NISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVV 179
           N+SFEEAA+LPLA  TA +  F+  G K GQT+ I G AGGVG+  +QLAK   GA  V+
Sbjct: 116 NLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKAR-GA-RVI 173

Query: 180 ATTSTPKVEFVKELGADKVIDYRKTKYE--DIEEKFDVLYDTIGD--CKNSFVVAKDNAP 235
           AT S    +F++ LGAD+VIDY K  +E        D + DT+G      S  + K    
Sbjct: 174 ATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKPGGR 233

Query: 236 IVDITWPPSHPRAI------YSSLTV--SGEILEKLRPFIESGKLKAQIDPTGPYKFKDV 287
           +V I  PP   +A          + V   GE L +L   +E+GKL+  +D    +  +D 
Sbjct: 234 LVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRV--FPLEDA 291

Query: 288 IEAFRYLETGRARGKVVI 305
            EA   LE+G ARGKVV+
Sbjct: 292 AEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  292 bits (751), Expect = 2e-98
 Identities = 133/330 (40%), Positives = 181/330 (54%), Gaps = 40/330 (12%)

Query: 5   WYYEEYGPKEVLKL--GDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSDFPA 59
             Y  YG  EVL L   + P+PTP+  ++LV+V AA++NP+D K R+   + L    FP 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKP 119
           +PG D AG VVA G+ VT+F  GDEV+G +         K  GALAE++V  ES +AKKP
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLP-------PKGGGALAEYVVAPESGLAKKP 113

Query: 120 KNISFEEAASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
           + +SFEEAA+LP+A  TA++  + AG  K GQ + I G +GGVGT  +Q+AK   GA HV
Sbjct: 114 EGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKAL-GA-HV 171

Query: 179 VATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDVLYDTIGDCKNSFV----VAK 231
               ST   E V+ LGAD+VIDY    +  +    EK+DV++D +G+   S        K
Sbjct: 172 TGVCSTRNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALK 231

Query: 232 DNAPIVDI----------------TWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQ 275
                V +                T      R  +     + E LE+L   +E GKLK  
Sbjct: 232 PGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPV 291

Query: 276 IDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           ID    Y  +D  EA+R L++GRARGKVVI
Sbjct: 292 IDSV--YPLEDAPEAYRRLKSGRARGKVVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  276 bits (708), Expect = 8e-92
 Identities = 126/327 (38%), Positives = 170/327 (51%), Gaps = 38/327 (11%)

Query: 8   EEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSD-FPAVPGCDMA 66
           E +G  EV +L + P P P   Q+LV+V A+ +NP+D+K R+         PA+ GCD+A
Sbjct: 7   ESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVA 66

Query: 67  GIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEE 126
           G+V A G  VT+F  GDEVYG              G+LAE+ VV+  L+A KP N+S  E
Sbjct: 67  GVVEAVGEGVTRFRVGDEVYGCAGGLGGLQ-----GSLAEYAVVDARLLALKPANLSMRE 121

Query: 127 AASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP 185
           AA+LPL   TA EG    A  + GQT+ I GGAGGVG + +QLAK   GA  V AT S+ 
Sbjct: 122 AAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAA-GA-RVYATASSE 179

Query: 186 KVEFVKELGADKVIDYRKTKYEDIEEK------FDVLYDTIG--DCKNSFVVAKDNAPIV 237
           K  F + LGAD +I YR+T   +   +      FDV++DT+G      SF        +V
Sbjct: 180 KAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVV 238

Query: 238 DIT------WPPSHPRAI-YS-------SLTVS-----GEILEKLRPFIESGKLKAQIDP 278
            I         P   R   YS        LT       GEIL +    +E G+L+  +DP
Sbjct: 239 SILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDP 298

Query: 279 TGPYKFKDVIEAFRYLETGRARGKVVI 305
              +  ++   A   LE+G ARGK+VI
Sbjct: 299 R-TFPLEEAAAAHARLESGSARGKIVI 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  232 bits (595), Expect = 2e-74
 Identities = 120/359 (33%), Positives = 169/359 (47%), Gaps = 67/359 (18%)

Query: 4   AWYYEEYGPKEVL-KLGDFPLPTPQH-DQLLVQVRAAALNPID-------------SKRR 48
           AW    YG  + L  L +  +P  +  +Q+L++V AA++NPID              KR+
Sbjct: 3   AWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRK 62

Query: 49  Q--RPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAE 106
                    +FP   G D +G+VV  G+ V  F  GDEV+G +  ++        G  AE
Sbjct: 63  PQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQ-------GTHAE 115

Query: 107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAG-----FKTGQTIFIVGGAGGV 161
           ++VV E+ ++KKPKN+S EEAASLP A  TA       G        G+ + I+GG+GGV
Sbjct: 116 YVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGV 175

Query: 162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED---IEEKFDVLYD 218
           GT  IQL K  +GA HV  T ST  +  VK LGAD VIDY    +E+      KFDV+ D
Sbjct: 176 GTFAIQLLKA-WGA-HVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILD 233

Query: 219 TIGDCKNSFV--VAKDNAPIVDITWPPSH-------PRAIYSSLTV-------------- 255
           T+G     +   + K     V +  P             +  S                 
Sbjct: 234 TVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSH 293

Query: 256 --------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
                   SG  L++L   +E GK+K  ID    + F++V EA+  +E+G ARGK VI 
Sbjct: 294 YRWGFFSPSGSALDELAKLVEDGKIKPVIDKV--FPFEEVPEAYEKVESGHARGKTVIK 350

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  222 bits (568), Expect = 8e-71
 Identities = 119/333 (35%), Positives = 162/333 (48%), Gaps = 40/333 (12%)

Query: 3   NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFPAVP 61
            A   EE+G  EVLK+ + P P P   ++LV+V+AA +NPID   RQ         P +P
Sbjct: 2   KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61

Query: 62  GCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKN 121
           G + AG+VVA G+ VT F  GD V          G + + G  AE++VV    +   P  
Sbjct: 62  GSEAAGVVVAVGSGVTGFKVGDRVAAL-------GGVGRDGGYAEYVVVPADWLVPLPDG 114

Query: 122 ISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           +SFEEAA+LPLA  TA    F  AG K G+T+ + G AGGVG+  IQLAK   GA+ V  
Sbjct: 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKAL-GATVVAV 173

Query: 181 TTSTPKVEFVKELGADKVIDYRKTKYED------IEEKFDVLYDTIGD--CKNSFVVAKD 232
            +S+ K+E +KELGAD VI+YR+  + +        +  DV+ DT+G      S      
Sbjct: 174 VSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAP 233

Query: 233 NAPIVDI-------TWPPSHPRAIYSSLTVSG------------EILEKLRPFIESGKLK 273
              +V I         P +    +   LT+ G            E L +L   + SGKLK
Sbjct: 234 GGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLK 293

Query: 274 AQIDPTGPYKFKDVIEAF-RYLETGRARGKVVI 305
             ID    Y   +   A    L   R  GKVV+
Sbjct: 294 PVIDRV--YPLAEAPAAAAHLLLERRTTGKVVL 324

Length = 326

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score =  198 bits (507), Expect = 2e-61
 Identities = 111/352 (31%), Positives = 174/352 (49%), Gaps = 62/352 (17%)

Query: 1   MQNAWYYEEYGP-KEVLKLGDFPLPTPQ---HDQLLVQVRAAALNPIDSKRRQRPLFPSD 56
           M+ A  + +  P  +   L D  LP P     D LLV+V A ++NP+D+K R        
Sbjct: 1   MK-AIGFTQPLPITDPDSLIDIELPKPVPGGRD-LLVRVEAVSVNPVDTKVRAGGAPVPG 58

Query: 57  FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY--GNIQDFNAEGKLKQLGALAEFIVVEESL 114
            P + G D +G+V A G+ VT F  GDEVY  G+I          + G+ AE+ +V+E +
Sbjct: 59  QPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDI---------TRPGSNAEYQLVDERI 109

Query: 115 IAKKPKNISFEEAASLPLAVQTAIE------GFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           +  KPK++SF EAA+LPL   TA E      G        G+T+ I+GGAGGVG++ IQL
Sbjct: 110 VGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQL 169

Query: 169 AKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFDVL----------- 216
           AK       V+AT S P+ + +VKELGAD VI++     +D+ E+ + L           
Sbjct: 170 AKQ-LTGLTVIATASRPESIAWVKELGADHVINHH----QDLAEQLEALGIEPVDYIFCL 224

Query: 217 ------YDTIGDC---KNSFVVAKDNAPIVDIT----------WPPSHPRAIY--SSLTV 255
                 +D + +    +    +  D    +D+           W     R+++    +  
Sbjct: 225 TDTDQHWDAMAELIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIE 284

Query: 256 SGEILEKLRPFIESGKLKAQIDPT-GPYKFKDVIEAFRYLETGRARGKVVIS 306
             EIL ++   +++GKLK  +  T GP   +++ EA   LE+G+  GK+V+ 
Sbjct: 285 QHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  193 bits (493), Expect = 2e-59
 Identities = 110/333 (33%), Positives = 147/333 (44%), Gaps = 44/333 (13%)

Query: 13  KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAK 72
             +L + D P+P P  D++LV+V+A ALNP+D K  Q   F   +PA+ GCD AG VV  
Sbjct: 11  GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKH-QDYGFIPSYPAILGCDFAGTVVEV 69

Query: 73  GTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPL 132
           G+ VT+F  GD V G +   N      + GA  E++V +  L AK P NISFEEAA+LP+
Sbjct: 70  GSGVTRFKVGDRVAGFVHGGNP--NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPV 127

Query: 133 AVQTAIEGF-----------KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
            + TA               K +    G+ + I GG+  VGTL IQLAK       V+ T
Sbjct: 128 GLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY--KVITT 185

Query: 182 TSTPKVEFVKELGADKVIDYRK-TKYEDIEE----KFDVLYDTIGDC---KNSFVVAKDN 233
            S    + VK LGAD V DY      EDI      K     D I      +        +
Sbjct: 186 ASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRS 245

Query: 234 A--------PIVDITWPPSHPRAIYSSL-TVSGEILEK----------LRPFIESGKLKA 274
                    P+ + T P    +  +    TV GEI E           L   +E GKLK 
Sbjct: 246 GGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKP 305

Query: 275 QIDPTGPYKFKDVIEAFRYLETGRARG-KVVIS 306
                     + V E    L  G+  G K+V+ 
Sbjct: 306 HPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVR 338

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  191 bits (488), Expect = 8e-59
 Identities = 101/338 (29%), Positives = 152/338 (44%), Gaps = 51/338 (15%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRR----QRPLFPSDFPA 59
           A  Y E+G  +VL+LGD P+PTP   ++LV+V A+ +NP+D+  R             P 
Sbjct: 3   AIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPL---PY 59

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKP 119
           VPG D AG+V A G  V     GD V+         G  ++ G  AE++VV    +   P
Sbjct: 60  VPGSDGAGVVEAVGEGVDGLKVGDRVW-----LTNLGWGRRQGTAAEYVVVPADQLVPLP 114

Query: 120 KNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
             +SFE+ A+L +   TA    F  AG K G+T+ + GG+G VG   +QLA+   GA  V
Sbjct: 115 DGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARW-AGA-RV 172

Query: 179 VATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK---------FDVLYDTIGDCKNS-- 226
           +AT S+    E V++ GAD V +YR    ED+ ++          DV+ + + +  N   
Sbjct: 173 IATASSAEGAELVRQAGADAVFNYRA---EDLADRILAATAGQGVDVIIEVLAN-VNLAK 228

Query: 227 -FVVAKDNAPIV---------DITWPPS-------HPRAIY-SSLTVSGEILEKLRPFIE 268
              V      IV          I   P            +Y ++        E +   + 
Sbjct: 229 DLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLA 288

Query: 269 SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
            G L+  I     Y  ++   A   +E+G A GKVV+ 
Sbjct: 289 DGALRPVIARE--YPLEEAAAAHEAVESGGAIGKVVLD 324

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  187 bits (477), Expect = 3e-57
 Identities = 104/342 (30%), Positives = 157/342 (45%), Gaps = 61/342 (17%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQR--PLFPSDFPAVP 61
           A   +E G  EVL+LG+ P P P   ++L++V AA +N  D  +RQ   P  P     + 
Sbjct: 3   AIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP-PPGASDIL 61

Query: 62  GCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKN 121
           G ++AG+VVA G  VT +  GD V            L   G  AE++VV    +   P+ 
Sbjct: 62  GLEVAGVVVAVGPGVTGWKVGDRVCA----------LLAGGGYAEYVVVPAGQLLPVPEG 111

Query: 122 ISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           +S  EAA+LP    TA +  F+  G K G+T+ I GGA GVGT  IQLAK   GA  V+A
Sbjct: 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKAL-GA-RVIA 169

Query: 181 TTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGD---CKNSFVVA 230
           T  +  K+E  + LGAD  I+YR   + +  ++       DV+ D +G     +N   +A
Sbjct: 170 TAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALA 229

Query: 231 KD-----------NAPIVDITWPPSHPRAIYSSLTVSG----------------EILEKL 263
            D               +D+         +   LT++G                   E +
Sbjct: 230 PDGRLVLIGLLGGAKAELDL------APLLRKRLTLTGSTLRSRSLEEKAALAAAFREHV 283

Query: 264 RPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            P   SG+++  ID    +  ++  EA R +E+    GK+V+
Sbjct: 284 WPLFASGRIRPVIDKV--FPLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  183 bits (467), Expect = 2e-55
 Identities = 114/348 (32%), Positives = 161/348 (46%), Gaps = 51/348 (14%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDS-KRRQRPLFPSDFPA 59
           M+ A     +G  EVL+ GD P P P  D++LV+V+AAALN +D   RR  P      P 
Sbjct: 1   MK-AVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPH 59

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEV--YGNIQ----DFNAEGK-----------LKQLG 102
           + G D AG+V A G  VT    G  V  Y  I     ++   G+               G
Sbjct: 60  ILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDG 119

Query: 103 ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAGGV 161
             AE++ V    +   P N+SFEEAA+ PL   TA     T A  + G+T+ + G   GV
Sbjct: 120 GYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGV 179

Query: 162 GTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF------D 214
           G+  IQ+AK F GA+ V+AT  +  K+E  KELGAD VIDYRK  +     +       D
Sbjct: 180 GSAAIQIAKLF-GAT-VIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVD 237

Query: 215 VLYDTIGDC--KNSFVVAKDNAPIVDITW-------PPSHPRAIY--------SSLTVSG 257
           V+ + +G    + S         +V  T         P   R ++        S++    
Sbjct: 238 VVVEHVGAATWEKSLKSLARGGRLV--TCGATTGYEAPIDLRHVFWRQLSILGSTMGTKA 295

Query: 258 EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           E+ E LR  +  GKLK  ID    +  ++  EA R LE+    GK+V+
Sbjct: 296 ELDEALR-LVFRGKLKPVIDSV--FPLEEAAEAHRRLESREQFGKIVL 340

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  178 bits (454), Expect = 1e-53
 Identities = 112/337 (33%), Positives = 155/337 (45%), Gaps = 53/337 (15%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGC 63
           AW   + G    L L +  +P P   ++LV+V AA LNP+D K          +P VPG 
Sbjct: 3   AWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGV 62

Query: 64  DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNIS 123
           D AG+VVA G  VT +  GD V  +         L + G+ AE+ VV+   +   P ++S
Sbjct: 63  DGAGVVVAVGAKVTGWKVGDRVAYH-------ASLARGGSFAEYTVVDARAVLPLPDSLS 115

Query: 124 FEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
           FEEAA+LP A  TA +  FK    + G+TI I GGAGGVG+  +QLAK       V+ T 
Sbjct: 116 FEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRA--GLRVITTC 173

Query: 183 STPKVEFVKELGADKVIDYRKTKY-EDIEE-----KFDVLYDTIG--------DC---KN 225
           S    E+VK LGAD VIDY      E I+E       D + DT+G               
Sbjct: 174 SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNG 233

Query: 226 SFVVAKDNAPIVDITWPPSHPRAI------------------YSSLTVSGEILEKLRPFI 267
             V  +      D +  P   RA+                  +  L  +GE L +L   +
Sbjct: 234 HLVCIQGR---PDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLEL---L 287

Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVV 304
            +GKL+  +    P  F+ + EA R L+    RGK+V
Sbjct: 288 AAGKLEPLVIEVLP--FEQLPEALRALKDRHTRGKIV 322

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  171 bits (437), Expect = 3e-51
 Identities = 102/342 (29%), Positives = 151/342 (44%), Gaps = 62/342 (18%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQH-DQLLVQVRAAALNPIDS-----KRRQRPLFPSDF 57
           A   +E G  E L L + P P P    ++ ++V AA +N  D      K + +P      
Sbjct: 3   AVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKP----PL 57

Query: 58  PAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
           P VPG ++AG+V A G  VT F  GD V            L   G  AE +VV  + +  
Sbjct: 58  PFVPGSEVAGVVEAVGEGVTGFKVGDRVVA----------LTGQGGFAEEVVVPAAAVFP 107

Query: 118 KPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS 176
            P  +SFEEAA+LP+   TA       A  + G+T+ ++G AGGVG   +QLAK   GA 
Sbjct: 108 LPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKAL-GA- 165

Query: 177 HVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF---------DVLYDTIGD--CK 224
            V+A  S+  K+   + LGAD VIDYR     D+ E+          DV+YD +G    +
Sbjct: 166 RVIAAASSEEKLALARALGADHVIDYRD---PDLRERVKALTGGRGVDVVYDPVGGDVFE 222

Query: 225 NSFVVAKDNAPIVDITW----PPSHP--RAIYSSLTVSG---------------EILEKL 263
            S         ++ I +     P  P    +  +++V G                 L +L
Sbjct: 223 ASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAEL 282

Query: 264 RPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
              +  GK++  +     +  +   EA R L   +A GKVV+
Sbjct: 283 FDLLAEGKIRPHVSAV--FPLEQAAEALRALADRKATGKVVL 322

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  169 bits (432), Expect = 2e-50
 Identities = 112/350 (32%), Positives = 149/350 (42%), Gaps = 89/350 (25%)

Query: 8   EEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAG 67
            + G  EVL+  D P+P P   ++LV+  A  +N ID+  R   L+P   P V G + AG
Sbjct: 6   HKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFR-SGLYPLPLPFVLGVEGAG 64

Query: 68  IVVAKGTSVTKFNTGDEV-YGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEE 126
           +V A G  VT F  GD V Y               GA AE+ VV  S + K P  IS E 
Sbjct: 65  VVEAVGPGVTGFKVGDRVAYAGP-----------PGAYAEYRVVPASRLVKLPDGISDET 113

Query: 127 AASLPLAVQTA---IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS 183
           AA+L L   TA   +   +T   K G T+ +   AGGVG L+ Q AK   GA  V+ T S
Sbjct: 114 AAALLLQGLTAHYLLR--ETYPVKPGDTVLVHAAAGGVGLLLTQWAKAL-GA-TVIGTVS 169

Query: 184 TP-KVEFVKELGADKVIDYRKTKYEDIEEK---------FDVLYDTIGDCKNSFVVAKDN 233
           +  K E  +  GAD VI+YR    ED  E+          DV+YD +G         KD 
Sbjct: 170 SEEKAELARAAGADHVINYRD---EDFVERVREITGGRGVDVVYDGVG---------KD- 216

Query: 234 APIVDITWPPS----HPRAIYSSL-TVSGEI----LEKL--------RP----------- 265
                 T+  S     PR    S    SG +    L +L        RP           
Sbjct: 217 ------TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREE 270

Query: 266 ----------FIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
                      + SGKLK +I     Y   D  +A R LE+ +  GK+++
Sbjct: 271 LLARAAELFDAVASGKLKVEIG--KRYPLADAAQAHRDLESRKTTGKLLL 318

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score =  170 bits (433), Expect = 2e-50
 Identities = 103/353 (29%), Positives = 158/353 (44%), Gaps = 61/353 (17%)

Query: 6   YYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGC 63
           +     P  +  +   PLP   + ++++V+V AAALNP+D K      F         G 
Sbjct: 6   FKNNTSPLTITTI-KLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGR 64

Query: 64  DMAGIVVAKGTSV-TKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEES----LIAKK 118
           D +G++V  G++V +++  GDEV G              G L+++++V+       I +K
Sbjct: 65  DYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQ-----GTLSQYLLVDPKKDKKSITRK 119

Query: 119 PKNISFEEAASLPLAVQTAIEGFKTAGFKTGQT--IFIVGGAGGVGTLVIQLAKHFYGAS 176
           P+NIS EEAA+ PL + TA +  +  G K G    + ++GG+  VG   IQLAK+ Y   
Sbjct: 120 PENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIG 179

Query: 177 HVVATTSTPKVEFVKELGADKVIDYRKTK----------YEDIEEKFDVLYDTIG----- 221
            VV T S+   E  K+LGAD  IDY                  + KFD++ D +G     
Sbjct: 180 TVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLF 239

Query: 222 DCKNSFVVAKD-----------------NAPIVDITWPPSHPRAIYSSLTV--------- 255
              NS +  K                           P ++ R ++ SL +         
Sbjct: 240 PHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFL 299

Query: 256 ---SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
              + + +EK    I  GK+K  ID    Y F+D  EAF  L++ RA+GKVVI
Sbjct: 300 LDPNADWIEKCAELIADGKVKPPIDSV--YPFEDYKEAFERLKSNRAKGKVVI 350

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  168 bits (427), Expect = 1e-49
 Identities = 112/341 (32%), Positives = 154/341 (45%), Gaps = 46/341 (13%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSK--RRQRPLFPSDFPAVP 61
           AW     G  + LKL + P+P P   ++LV+V A +LN  D      + P  P   P +P
Sbjct: 3   AWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP-PPVKDPLIP 61

Query: 62  GCDMAGIVVAKGTSVTKFNTGDEVYGNI------QDFNAEGKLKQLGA-----LAEFIVV 110
             D AG VVA G  VT+F  GD V              AE +   LG      LAE++V+
Sbjct: 62  LSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVL 121

Query: 111 EESLIAKKPKNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLA 169
            E  + + P ++SFEEAA+LP A  TA    F     K G T+ +V G GGV    +Q A
Sbjct: 122 PEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTV-LVQGTGGVSLFALQFA 180

Query: 170 KHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK---------FDVLYDT 219
           K   GA  V+AT+S+  K+E  K LGAD VI+YR T   D  E+          D + + 
Sbjct: 181 KAA-GA-RVIATSSSDEKLERAKALGADHVINYRTT--PDWGEEVLKLTGGRGVDHVVEV 236

Query: 220 IG--DCKNSFVVAKDNAPIVDI------TWPPSHPRAIYSSLTVSG------EILEKLRP 265
            G      S         I  I        P      +    T+ G         E +  
Sbjct: 237 GGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNR 296

Query: 266 FIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
            IE+ +++  ID    + F++  EA+RYLE+G   GKVVI 
Sbjct: 297 AIEAHRIRPVID--RVFPFEEAKEAYRYLESGSHFGKVVIR 335

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  164 bits (418), Expect = 2e-48
 Identities = 103/339 (30%), Positives = 151/339 (44%), Gaps = 52/339 (15%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSK-RRQRPLFPSDFPAVPG 62
           A  + ++G  EVL++ + P+P P   ++L++V A  LN  D+  RR   + P   PA  G
Sbjct: 3   AVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLG 62

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNI 122
            + AG+V A G  VT F  GD V         +      G  AE+ +V  + + K P  +
Sbjct: 63  YEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQY-----GTYAEYALVPAAAVVKLPDGL 117

Query: 123 SFEEAASLPLAVQTA----IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
           SF EAA+L +   TA    +E    AG + G ++ I   +  VG   IQ+A    GA  V
Sbjct: 118 SFVEAAALWMQYLTAYGALVE---LAGLRPGDSVLITAASSSVGLAAIQIANAA-GA-TV 172

Query: 179 VATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK---------FDVLYDTIG--DCKNS 226
           +ATT T  K + +  LGA  VI   +   ED+  +          DV++D +G       
Sbjct: 173 IATTRTSEKRDALLALGAAHVIVTDE---EDLVAEVLRITGGKGVDVVFDPVGGPQFAKL 229

Query: 227 FVVAKDNAPIVDITWPPSHP------RAIYSSLTVSG----EIL---EKLRPFIE----- 268
                    +V        P       A+  SLT  G    EI    E  R  I      
Sbjct: 230 ADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDG 289

Query: 269 --SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
             SG LK  +D    + F D++EA RYLE+G+  GK+V+
Sbjct: 290 LASGALKPVVDRV--FPFDDIVEAHRYLESGQQIGKIVV 326

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score =  161 bits (409), Expect = 4e-47
 Identities = 99/339 (29%), Positives = 154/339 (45%), Gaps = 61/339 (17%)

Query: 8   EEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ--RPLFPSDFPAVPGCDM 65
            E G  EVL L + PLP P+  ++L++V AA +N  D  +R    P  P     + G ++
Sbjct: 7   TEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPP-PPGASDILGLEV 65

Query: 66  AGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFE 125
           AG VVA G  V+++  GD V            L   G  AE++ V    +   P+ +S  
Sbjct: 66  AGEVVAVGEGVSRWKVGDRVCA----------LVAGGGYAEYVAVPAGQVLPVPEGLSLV 115

Query: 126 EAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184
           EAA+LP    T     F+  G K G+T+ I GGA G+GT  IQLAK F GA  V  T  +
Sbjct: 116 EAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAF-GA-RVFTTAGS 173

Query: 185 P-KVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGDC---KNSFVVAKDNA 234
             K    + LGAD  I+YR+  + ++ +        DV+ D +G     +N   +A D  
Sbjct: 174 DEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGR 233

Query: 235 PI-----------VDITWPPSHPRAIYSSLTVSG------------EILEKLR----PFI 267
            +           +D+         +   LT++G             I  +LR    P +
Sbjct: 234 IVQIGFQGGRKAELDL------GPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLL 287

Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
            SG+++  ID    +  +D  +A   +E+G   GK+V++
Sbjct: 288 ASGRVRPVIDKV--FPLEDAAQAHALMESGDHIGKIVLT 324

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score =  159 bits (404), Expect = 2e-46
 Identities = 103/324 (31%), Positives = 165/324 (50%), Gaps = 43/324 (13%)

Query: 20  DFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKF 79
           D P P P    LLV+V+A ++NP+D+K R R    +  P + G D AG+VVA G  VT F
Sbjct: 21  DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80

Query: 80  NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIE 139
             GDEV+         G + + G+ AEF +V+E ++  KPK++SF EAA+LPL   TA E
Sbjct: 81  KPGDEVW-------YAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWE 133

Query: 140 ------GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKE 192
                 G         + + I+GGAGGVG+++IQLA+   G + V+AT S P+  E+V E
Sbjct: 134 LLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLT-VIATASRPESQEWVLE 192

Query: 193 LGADKVIDYRKTKYEDIEE-------------KFDVLYDTIGDC---KNSFVVAKDNAPI 236
           LGA  VID+ K     +E+               D  +  I +    +  F +  D A +
Sbjct: 193 LGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPAEL 252

Query: 237 ---------VDITWPPSHPRAIYSS--LTVSGEILEKLRPFIESGKLKAQIDPT-GPYKF 284
                    + + W     R+++ +  +     +L ++   +++GK++  +  T G    
Sbjct: 253 DISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINA 312

Query: 285 KDVIEAFRYLETGRARGKVVISAF 308
            ++  A   +E+G+ARGK+V+  F
Sbjct: 313 ANLKRAHALIESGKARGKIVLEGF 336

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  153 bits (389), Expect = 8e-45
 Identities = 74/213 (34%), Positives = 97/213 (45%), Gaps = 24/213 (11%)

Query: 30  QLLVQVRAAALNPIDSK-RRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGN 88
           ++LV+V AA L   D   RR     P   P + G + AG+VV  G  VT    GD V   
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 89  IQ-------------DFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQ 135
                                     G  AE++VV    +   P  +S EEAA LP  + 
Sbjct: 61  PNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLA 120

Query: 136 TAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKEL 193
           TA    + AG  K G T+ ++ GAGGVG L  QLAK   GA  V+ T  +  K+E  KEL
Sbjct: 121 TAYHALRRAGVLKPGDTVLVL-GAGGVGLLAAQLAKA-AGA-RVIVTDRSDEKLELAKEL 177

Query: 194 GADKVIDYRKTKYEDIE-----EKFDVLYDTIG 221
           GAD VIDY++   E+          DV+ D +G
Sbjct: 178 GADHVIDYKEEDLEEELRLTGGGGADVVIDAVG 210

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  138 bits (349), Expect = 4e-38
 Identities = 105/349 (30%), Positives = 154/349 (44%), Gaps = 60/349 (17%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPS--DFPAVP 61
           A     +G  + LK+    LP P   ++ V+V A  LN  D   RQ  L+ S    P VP
Sbjct: 2   AVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQ-GLYDSAPKPPFVP 60

Query: 62  GCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKN 121
           G + AG V A G  V  F  GD V G          L + G  AE + V    +   P  
Sbjct: 61  GFECAGTVEAVGEGVKDFKVGDRVMG----------LTRFGGYAEVVNVPADQVFPLPDG 110

Query: 122 ISFEEAASLPLAVQTA-IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           +SFEEAA+ P+   TA    F+    + GQ++ +   AGGVG    QL K     + VV 
Sbjct: 111 MSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVT-VVG 169

Query: 181 TTSTPKVEFVKELGADKVIDYRKTKY-EDIE----EKFDVLYDTIG-------------- 221
           T S  K E +KE G   VIDYR   Y E+++    E  D++ D +G              
Sbjct: 170 TASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPM 229

Query: 222 --------------DCKNSFVVAKD--NAPIVDITWPPSHPRAI--------YSSLTVSG 257
                         + ++ F +AK   N P VD     S  +++        +    +  
Sbjct: 230 GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLT 289

Query: 258 EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
           E+++KL    E GK+K +ID    + F++V EA R L++ +  GKVV++
Sbjct: 290 EVMDKLLKLYEEGKIKPKIDSV--FPFEEVGEAMRRLQSRKNIGKVVLT 336

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  135 bits (341), Expect = 2e-37
 Identities = 90/312 (28%), Positives = 139/312 (44%), Gaps = 54/312 (17%)

Query: 29  DQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVY 86
           D++ V+V+AA LN  D        P   +      G + +GIV   G+ VT    GD V 
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALGLLPGDETPL----GLECSGIVTRVGSGVTGLKVGDRVM 56

Query: 87  GNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AG 145
           G              GA A  + V+  L+ K P ++SFEEAA+LP+A  TA       A 
Sbjct: 57  GLAP-----------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLAR 105

Query: 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELG--ADKVIDYR 202
            + G+++ I   AGGVG   IQLA+H  GA  V AT  +  K EF++ELG   D +   R
Sbjct: 106 LQKGESVLIHAAAGGVGQAAIQLAQHL-GA-EVFATVGSEEKREFLRELGGPVDHIFSSR 163

Query: 203 KTKY-EDIEEK-----FDVLYDTIGDCK--NSFVVAKDNAPIVDI--TWPPSHPR----- 247
              + + I         DV+ +++       S+         V+I      S+ +     
Sbjct: 164 DLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP 223

Query: 248 ----AIYSSLTVS----------GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRY 293
                 +SS+ +            E+L ++   +E+G LK  + PT        I+AFR 
Sbjct: 224 FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKP-LPPT-VVPSASEIDAFRL 281

Query: 294 LETGRARGKVVI 305
           +++G+  GKVV+
Sbjct: 282 MQSGKHIGKVVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  135 bits (342), Expect = 4e-37
 Identities = 93/354 (26%), Positives = 146/354 (41%), Gaps = 64/354 (18%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPS 55
              A   +++G    L++ + P+P P   ++L++V A       L+          L   
Sbjct: 3   TMKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKL--- 57

Query: 56  DFPAVPGCDMAGIVVAKGTSVTKFNTGDEV------------------------YGNIQD 91
             P +PG ++ G VV  G  VT    GD V                           I  
Sbjct: 58  --PLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITG 115

Query: 92  FNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQT 151
           +  +G        AE++VV    + K P+ +   EAA L  A  T     K A  K G+ 
Sbjct: 116 YTTDG------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANVKPGKW 169

Query: 152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKY-EDI 209
           + +V GAGG+G + +Q AK   GA  V+A T +  K+E  K+LGAD VI+   +   E +
Sbjct: 170 VAVV-GAGGLGHMAVQYAKAM-GA-EVIAITRSEEKLELAKKLGADHVINSSDSDALEAV 226

Query: 210 EEKFDVLYDTIG--DCKNSFVVAKDNAPIVDITWPPSHP-------------RAIYSSLT 254
           +E  D + DT+G    + S    +    +V +  P   P              +I  SL 
Sbjct: 227 KEIADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLV 286

Query: 255 VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF 308
            +   LE+   F   GK+K +I  T      ++ EA+  +E G+ RG+ VI   
Sbjct: 287 GTRADLEEALDFAAEGKIKPEILET--IPLDEINEAYERMEKGKVRGRAVIDMS 338

Length = 339

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score =  133 bits (337), Expect = 8e-37
 Identities = 84/315 (26%), Positives = 123/315 (39%), Gaps = 70/315 (22%)

Query: 33  VQVRAAALNPIDSKRRQRPLFPS---DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNI 89
           ++VRAA LN  D       L         AV G + AG+V   G  VT    GD V G  
Sbjct: 1   IEVRAAGLNFRD------VLIALGLYPGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA 54

Query: 90  QDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKT 148
                       GA A  +V +  L+   P   SFEEAA++P+   TA       A  + 
Sbjct: 55  P-----------GAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRP 103

Query: 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELG--ADKVIDYRKTK 205
           G+++ I   AGGVG   IQLA+H  GA  V AT  +P K +F++ LG   D +   R   
Sbjct: 104 GESVLIHAAAGGVGQAAIQLARH-LGA-EVFATAGSPEKRDFLRALGIPDDHIFSSRDLS 161

Query: 206 YED----------------------IEEKFDVL-----------YDTIGDCKNSFVVAKD 232
           + D                      ++     L            D   + + +    + 
Sbjct: 162 FADEILRATGGRGVDVVLNSLSGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLAMAPFRP 221

Query: 233 NAP--IVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEA 290
           N     VD+      P  I        E+L ++      G L+  +  T  +   D  +A
Sbjct: 222 NVSYHAVDLDALEEGPDRI-------RELLAEVLELFAEGVLRP-LPVT-VFPISDAEDA 272

Query: 291 FRYLETGRARGKVVI 305
           FRY++ G+  GKVV+
Sbjct: 273 FRYMQQGKHIGKVVL 287

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score =  132 bits (333), Expect = 3e-36
 Identities = 95/318 (29%), Positives = 151/318 (47%), Gaps = 53/318 (16%)

Query: 24  PTPQHDQLLVQVRAAALNPIDSKRRQRPLFPS--DFPAVPGCDMAGIVVAKGTSVTKFNT 81
             P   ++ +QVRA +LN  D     R L+P+   +P  PG + +G+V A G  VT+   
Sbjct: 3   APPGPGEVRIQVRAFSLNFGDL-LCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAV 61

Query: 82  GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF 141
           GDEV     +         +G  A  + V E  + +KP ++SFEEA +LP+   T I+ F
Sbjct: 62  GDEVIAGTGE--------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF 113

Query: 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVID 200
             AG   G+ I I    GG G + +QLA+   GA  + AT S+  K+E++K+LG   VI+
Sbjct: 114 ARAGLAKGEHILIQTATGGTGLMAVQLARL-KGAE-IYATASSDDKLEYLKQLGVPHVIN 171

Query: 201 YRKTKYEDIEEKF---------DVLYDTIG--------DCKNSF-------VVAKDNAPI 236
           Y +   ED EE+          DV+ +T+         +C           + A  +AP 
Sbjct: 172 YVE---EDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPS 228

Query: 237 VDITWPPSHPRAIYS------SLTVSGEI---LEKLRPFIESGKLKAQIDPTGPYKFKDV 287
           VD++   S+ ++ +S       L     I     ++   +E G+L+  +     + F D+
Sbjct: 229 VDLS-VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRI--FPFDDI 285

Query: 288 IEAFRYLETGRARGKVVI 305
            EA+RYL      GKVV+
Sbjct: 286 GEAYRYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  132 bits (333), Expect = 4e-36
 Identities = 98/338 (28%), Positives = 159/338 (47%), Gaps = 54/338 (15%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDS----KRRQRPLFPSDFPA 59
           A  +E+ G  E LK+ D   P P   ++L++V+ A +NP+D       + +P+     P 
Sbjct: 3   ALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPM-----PH 56

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEV--YGNIQDFNAEGKLK---QL------------G 102
           +PG + AG+V   G  V     GD V  Y  + D   +  L     L            G
Sbjct: 57  IPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNG 116

Query: 103 ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVG 162
             AE+IVV E  + K P +IS E AASLP+A  TA    KTAG   G+T+ + G +G  G
Sbjct: 117 GYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTAGLGPGETVVVFGASGNTG 176

Query: 163 TLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKT--KYEDIEEKFDVLYDTI 220
              +QLAK   GA  V+A +     +++KE GAD+V+DY +   K ++I +  DV+ +++
Sbjct: 177 IFAVQLAKMM-GA-EVIAVSRK---DWLKEFGADEVVDYDEVEEKVKEITKMADVVINSL 231

Query: 221 GDC--KNSFVVAKDNAPIV------------DITWPPSHPRAIYSSLTVSGEILEKLRPF 266
           G      S  V      +V            D++   S   +I  S   +G   ++L   
Sbjct: 232 GSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGS---TGGTRKELLEL 288

Query: 267 IE-SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKV 303
           ++ +  LK ++  T  +K ++  EA + L +    G++
Sbjct: 289 VKIAKDLKVKVWKT--FKLEEAKEALKELFSKERDGRI 324

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  130 bits (329), Expect = 3e-35
 Identities = 94/335 (28%), Positives = 147/335 (43%), Gaps = 47/335 (14%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           + P + L++ + P P P   ++L++V+AA +   D    +       +P + G ++ G V
Sbjct: 7   HKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTV 66

Query: 70  VAKGTSVTKFNTGDEV--YGNIQ----DFNAEGK------LKQL-----GALAEFIVVEE 112
              G  V +F  GD V  Y  I     ++   G+        +      G  AE++ V E
Sbjct: 67  EEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPE 126

Query: 113 SLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHF 172
             + K P N+S E AA     V TA+   K AG K G T+ + G  GGVG   IQLAK  
Sbjct: 127 RSLVKLPDNVSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAK-A 185

Query: 173 YGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIG--DCK 224
            GA  +  T S  K++ +KELGAD VID  K       E        DV+ + +G    +
Sbjct: 186 LGARVIAVTRSPEKLKILKELGADYVIDGSK-----FSEDVKKLGGADVVIELVGSPTIE 240

Query: 225 NSFVVAKDNAPIVDI-----TWPPSHP-RAIYSSLTVSG-------EILEKLRPFIESGK 271
            S         +V I        P  P   I   + + G       ++ E L+  ++ GK
Sbjct: 241 ESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALK-LVKEGK 299

Query: 272 LKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
           +K  ID       +D+ EA   L++G+  G++V+ 
Sbjct: 300 IKPVIDRV--VSLEDINEALEDLKSGKVVGRIVLK 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score =  129 bits (326), Expect = 7e-35
 Identities = 105/345 (30%), Positives = 166/345 (48%), Gaps = 57/345 (16%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSD-FPA 59
           M  A   + +G  +VLK+G+ P P P+ + +L++V AA +N  D+ +RQ    P      
Sbjct: 1   MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE 60

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKP 119
           + G ++AG V   G+ V +F  GD V            L   G  AE+ V  +  +   P
Sbjct: 61  ILGLEVAGYVEDVGSDVKRFKEGDRVMA----------LLPGGGYAEYAVAHKGHVMHIP 110

Query: 120 KNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
           +  +FEEAA++P A  TA +  K     K GQ++ I  GA GVGT   QLA+  YGA+ +
Sbjct: 111 QGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEK-YGAATI 169

Query: 179 VATTSTPKVEFVKELGADKVIDYR-------KTKYEDIEEKFDVLYDTIGDC---KNSFV 228
           + T+S  KV+F K+L A  +I Y        K K    E+  +++ D +G     + + V
Sbjct: 170 ITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEV 229

Query: 229 VAKDNAPIV------------DITWPPSHPRA--IYSSL-------------TVSGEILE 261
           +A D   IV            ++  P    RA  I+S+L             +   E+L 
Sbjct: 230 LAVDGKWIVYGFMGGAKVEKFNLL-PLLRKRASIIFSTLRSRSDEYKADLVASFEREVL- 287

Query: 262 KLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
              P++E G++K  +D T  Y  ++V EA  +LE  +  GKVV++
Sbjct: 288 ---PYMEEGEIKPIVDRT--YPLEEVAEAHTFLEQNKNIGKVVLT 327

Length = 334

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  126 bits (318), Expect = 9e-34
 Identities = 90/337 (26%), Positives = 141/337 (41%), Gaps = 56/337 (16%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID-SKRRQRPLFPSDFPAVPGCDMAGI 68
            G  EVLK+ +  LP P   +++V+V A+ ++  D   RR         P  PG D+ G 
Sbjct: 9   RGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGR 68

Query: 69  VVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAA 128
           V A G+ VT F  GD V            L ++G  AE+I ++   +   P+ +   EA 
Sbjct: 69  VDALGSGVTGFEVGDRVAA----------LTRVGGNAEYINLDAKYLVPVPEGVDAAEAV 118

Query: 129 SLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187
            L L   TA +   + A   TGQ + I G +GGVG  +++LA    GA  V  T S    
Sbjct: 119 CLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELA-LLAGA-EVYGTASERNH 176

Query: 188 EFVKELGADKVIDYRKTKYED---IEEKFDVLYDTIG--DCKNSFVVAKDNAPIVDITWP 242
             ++ELGA   IDYR   +          DV++D +G    + S+        +V     
Sbjct: 177 AALRELGA-TPIDYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGN 235

Query: 243 PS---HPRAIYSSLTVSGEILE-KLRPF------------------------------IE 268
            S     R++ +  ++   + + KL P                               + 
Sbjct: 236 SSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLA 295

Query: 269 SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            GK++ +I    P    +V EA R LE+G+  GK+V+
Sbjct: 296 KGKIRPKIAKRLP--LSEVAEAHRLLESGKVVGKIVL 330

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  120 bits (304), Expect = 9e-32
 Identities = 91/338 (26%), Positives = 139/338 (41%), Gaps = 69/338 (20%)

Query: 13  KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDS-------KRRQRPLFPSDFPAVPGCDM 65
           +E   + D P+P P   ++LV+ R   +N  D            +P F   F  V     
Sbjct: 15  REATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGV----- 69

Query: 66  AGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFE 125
            G VVA G  VT F  GD V                GA AE+ VV        P+     
Sbjct: 70  -GEVVAVGEGVTDFKVGDAV-----------ATMSFGAFAEYQVVPARHAVPVPE--LKP 115

Query: 126 EAASLPLAVQTA-IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184
           E   L ++  TA I   +    K+G+T+ +   AGG G   +QLAK   G  HV+ T S+
Sbjct: 116 EVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKL-AG-CHVIGTCSS 173

Query: 185 P-KVEFVKELGADKVIDYRKTKYEDIEEKF--------DVLYDTIG-----DCKNSFVVA 230
             K EF+K LG D+ I+Y+    ED+ E          DV+Y+++G      C ++  + 
Sbjct: 174 DEKAEFLKSLGCDRPINYKT---EDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALK 230

Query: 231 ------------KDNAPIVDITWPPSHPRAIYSSLTVSG-----------EILEKLRPFI 267
                       +       +      P+ +  S +V G           + L++L    
Sbjct: 231 GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLY 290

Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           + GKL  ++DPT     + V +A  YL +G+  GKVV+
Sbjct: 291 QRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVV 328

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score =  119 bits (301), Expect = 2e-31
 Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 47/329 (14%)

Query: 8   EEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAG 67
           E+ G  EVLKL + P+P P+   +L++V+A  LN  +   RQ       FP V G +  G
Sbjct: 7   EQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVG 66

Query: 68  IVVAKGTSVTKFNTGDEVY----GNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNIS 123
            V         F  G  V     G  + F+        G+ AE+ +V    +     ++S
Sbjct: 67  EVEE--APGGTFTPGQRVATAMGGMGRTFD--------GSYAEYTLVPNEQVYAIDSDLS 116

Query: 124 FEEAASLPLAVQTAIEGFKTA-GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
           + E A+LP    TA      + G + G T+ I GG   VG   ++LAK   GA  V ATT
Sbjct: 117 WAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKA-LGA-TVTATT 174

Query: 183 STP-KVEFVKELGADKVIDYRKTKYEDIEE---KFDVLYDTIGD--CKNSF--------- 227
            +P +   +KELGAD+V+       E +      FD + + +G    K+S          
Sbjct: 175 RSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLRPGGIV 234

Query: 228 ---------VVAKDNAPIVDITWPPSHPRAIYS--SLTVSGEILEKLRPFIESGKLKAQI 276
                       +D  P+ DI  P      +    S  V    L++L  F+ +G L    
Sbjct: 235 CMTGLLGGQWTLEDFNPMDDI--PSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPP 292

Query: 277 DPTGPYKFKDVIEAFRYLETGRARGKVVI 305
                + F +++EA  Y+E+ RA GKVV+
Sbjct: 293 SKV--FTFDEIVEAHAYMESNRAFGKVVV 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  119 bits (301), Expect = 3e-31
 Identities = 90/341 (26%), Positives = 137/341 (40%), Gaps = 67/341 (19%)

Query: 20  DFPLPTPQHDQLLVQVRAAALNPIDSKRRQ--------------------RPLFPSDFPA 59
           D P+PTP   ++L++V A  +N  D   R+                           FP 
Sbjct: 20  DVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR 79

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFN----AEGKLKQL--------GALAEF 107
           + G D+ G VVA G  V     G+ V   + D +     E     +        G  AE+
Sbjct: 80  IQGADIVGRVVAVGEGVDTARIGERV---LVDPSIRDPPEDDPADIDYIGSERDGGFAEY 136

Query: 108 IVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQ 167
            VV           +S  E A+ P +  TA    + AG   G+T+ + G +GGVG+ ++Q
Sbjct: 137 TVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQ 196

Query: 168 LAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI----EEKFDVLYDTIGD- 222
           LAK   GA  V+A     K E V+ LGAD VI        D      E  DV+ D +G  
Sbjct: 197 LAKR-RGAI-VIAVAGAAKEEAVRALGADTVILRDAPLLADAKALGGEPVDVVADVVGGP 254

Query: 223 ---------CKNS-FVVAKDNA-PIVDITWPPSHPRAIY-SSLTVSG------EILEKLR 264
                         +V A   A P+V++       R +Y   LT+ G      E+  +L 
Sbjct: 255 LFPDLLRLLRPGGRYVTAGAIAGPVVELDL-----RTLYLKDLTLFGSTLGTREVFRRLV 309

Query: 265 PFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            +IE G+++  +  T  +   ++ EA       R  GK+V+
Sbjct: 310 RYIEEGEIRPVVAKT--FPLSEIREAQAEFLEKRHVGKLVL 348

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score =  115 bits (291), Expect = 2e-29
 Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 35/233 (15%)

Query: 8   EEYG-PKEVLKLGDFPLPTPQHDQLLVQVRAAALN----------PIDS-KRRQRPLFPS 55
           E YG P + ++L D P+P     ++LV V AA +N          P+ +   RQR     
Sbjct: 21  ERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDE 80

Query: 56  DFPAVPGCDMAGIVVAKGTSVTKFNTGDEV--YGNIQDFNAE----------------GK 97
            +  + G D +GIV A G  V  +  GDEV  + ++ D N                  G 
Sbjct: 81  PY-HIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGY 139

Query: 98  LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA---IEGFKTAGFKTGQTIFI 154
               G+ A+F +V+ + +  KPK++S+EEAA+  L   TA   + G+     K G  + I
Sbjct: 140 ETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLI 199

Query: 155 VGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207
            G +GG+G++ IQLA+   GA+ V   +S  K E+ + LGA+ VI+ R   + 
Sbjct: 200 WGASGGLGSMAIQLARAA-GANPVAVVSSEEKAEYCRALGAEGVINRRDFDHW 251

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  109 bits (274), Expect = 2e-27
 Identities = 101/348 (29%), Positives = 150/348 (43%), Gaps = 87/348 (25%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAV 60
           M+   Y    GP E L++ + P+P P  D++L++V A  +   D    +   F +  P V
Sbjct: 1   MKALVYE---GPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYE-GEFGAAPPLV 55

Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYG--NI----------------QDFNAEGKLKQLG 102
           PG + AG+VVA G+ VT F  GD V    NI                ++  A G + + G
Sbjct: 56  PGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVG-VTRNG 114

Query: 103 ALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGV 161
             AE++VV    + K P N+SFEEAA   PL+   A+ G    G K G ++ + G AG +
Sbjct: 115 GFAEYVVVPAKQVYKIPDNLSFEEAALAEPLS--CAVHGLDLLGIKPGDSVLVFG-AGPI 171

Query: 162 GTLVIQLAKHFYGASHV-VATTSTPKVEFVKELGADKVID----YRKTKYEDIEEKFDVL 216
           G L+ QL K   GAS V VA  +  K+E  K+LGA + +D      + + ED    FDV+
Sbjct: 172 GLLLAQLLKL-NGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVV 230

Query: 217 YDTIG------DCKNS---------FVVAKDNAPIVDITWPP------------------ 243
            +  G                    F V   +A    ++  P                  
Sbjct: 231 IEATGVPKTLEQAIEYARRGGTVLVFGVYAPDAR---VSISPFEIFQKELTIIGSFINPY 287

Query: 244 SHPRAIYSSLTVSGEI-----------LEKLRPFIES----GKLKAQI 276
           + PRAI  +L  SG+I           LE++   +E     G LK  +
Sbjct: 288 TFPRAI--ALLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGALKVVV 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  108 bits (273), Expect = 4e-27
 Identities = 97/351 (27%), Positives = 145/351 (41%), Gaps = 59/351 (16%)

Query: 2   QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPA 59
             A   EE+G K   ++ D P+P P   ++LV++ A+ +   D  +     P+ P   P 
Sbjct: 1   MKAAVVEEFGEKPY-EVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPK-LPL 58

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGK------------LKQL------ 101
           + G + AG+VVA G  V+    GD V G    ++A GK              Q       
Sbjct: 59  IGGHEGAGVVVAVGPGVSGLKVGDRV-GVKWLYDACGKCEYCRTGDETLCPNQKNSGYTV 117

Query: 102 -GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGG 160
            G  AE+ + +   +   P  +SFE+AA L  A  T  +  K AG K G  + I G  GG
Sbjct: 118 DGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKAGLKPGDWVVISGAGGG 177

Query: 161 VGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDT 219
           +G L +Q AK   G   V+A      K+E  KELGAD  +D++K    D  E    L   
Sbjct: 178 LGHLGVQYAKA-MGL-RVIAIDVGDEKLELAKELGADAFVDFKK---SDDVEAVKELTGG 232

Query: 220 IGDCKNSFVVAKDNAP-------------IVDITWPP------SHPRAIYSSLTVSGEI- 259
            G      V A   A              +V +  PP           +   +T+ G + 
Sbjct: 233 GG-AHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLV 291

Query: 260 -----LEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
                L++   F   GK+K  I        +D+ E F  +E G+  G+VV+
Sbjct: 292 GTRQDLQEALEFAARGKVKPHIQV---VPLEDLNEVFEKMEEGKIAGRVVV 339

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score =  109 bits (273), Expect = 5e-27
 Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 36/227 (15%)

Query: 8   EEYG-PKEVLKLGDFPLPTPQHDQLLVQVRAAALN----------PID--SKRRQRPLFP 54
           E  G P++ ++L   P+P     ++LV V AA +N          P+   +  R+     
Sbjct: 16  ERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGKLD 75

Query: 55  SDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------GNIQD--FNAE----G 96
             F  + G D +G+V   G  VT++  GDEV             G   D   ++E    G
Sbjct: 76  LPF-HIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQRIWG 134

Query: 97  KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA---IEGFKTAGFKTGQTIF 153
                G+ AEF +V++  +  KPK++++EEAA   L   TA   + G+  A  K G  + 
Sbjct: 135 YETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPAAVKPGDNVL 194

Query: 154 IVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200
           I G AGG+G+   QLA+   G + V   +S  K E+ + LGA+ VID
Sbjct: 195 IWGAAGGLGSYATQLARAG-GGNPVAVVSSPEKAEYCRSLGAEAVID 240

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  107 bits (269), Expect = 9e-27
 Identities = 91/349 (26%), Positives = 139/349 (39%), Gaps = 58/349 (16%)

Query: 2   QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSD 56
             AW + + G K +L L + P+P P   ++LV+V+AA      L+ +D          + 
Sbjct: 1   MKAWRFHK-GSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDG----GVPTLTK 55

Query: 57  FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY-----------------GNIQDFNAEGKLK 99
            P   G ++AG VV  G  VT F  GD V                  GN+        L 
Sbjct: 56  LPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLG 115

Query: 100 QLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
             G  AE+IVV    +   P  + F +AA    AV T       AG        +V G G
Sbjct: 116 IDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLG 175

Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK-----FD 214
           G+G   +Q+AK   GA+ +       K+E  KELGAD+V++      +D +       FD
Sbjct: 176 GLGLNAVQIAKAM-GAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFD 234

Query: 215 VLYD------TIGDCKNS------FVVAKDNAPIVDITWPPSHPRAIYSSLTVSG----- 257
           V++D      T  D + +       VV       + +         I   L + G     
Sbjct: 235 VIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTV---DLS-DLIARELRIIGSFGGT 290

Query: 258 -EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            E L ++   I  GKL  Q++        ++ E    L  G+ +G+VV+
Sbjct: 291 PEDLPEVLDLIAKGKLDPQVETR---PLDEIPEVLERLHKGKVKGRVVL 336

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  106 bits (268), Expect = 1e-26
 Identities = 96/346 (27%), Positives = 146/346 (42%), Gaps = 60/346 (17%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +GP +V +L + P+P P   ++LV+VRA  +   D K+ +        P + G ++AG +
Sbjct: 7   HGPNDV-RLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEI 65

Query: 70  VAKGTSVTKFNTGDEV------------YGNIQDFNAEGKLKQL-----GALAEFIVVEE 112
           V  G  VT F  GD V            Y    + N     K+      G  AE++ V  
Sbjct: 66  VEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPA 125

Query: 113 SLIAKK-----PKNISFEEAA-SLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVI 166
             + +      P N+SFEEAA   PLA    I   + AG K G T+ ++ GAG +G L  
Sbjct: 126 WAVKRGGVLKLPDNVSFEEAALVEPLA--CCINAQRKAGIKPGDTVLVI-GAGPIGLLHA 182

Query: 167 QLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKT-KYEDIEEKFDVL-YDTIGDC 223
            LAK   GA  V+ +  +  ++EF K+LGAD  ID  +    E + E  D    D +   
Sbjct: 183 MLAKAS-GARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVA 241

Query: 224 KNSFVVAKDNAPIVD----ITW--PPSHPRAI--------YSSLTVSG----------EI 259
             S         +V     I +         +        Y  +T++G          E 
Sbjct: 242 TGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEA 301

Query: 260 LEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           LE     I SGK+  +   T  +  +D+ EAF     G++  K+VI
Sbjct: 302 LE----LIASGKIDVKDLITHRFPLEDIEEAFELAADGKSL-KIVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  106 bits (267), Expect = 2e-26
 Identities = 87/347 (25%), Positives = 137/347 (39%), Gaps = 61/347 (17%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
            GP + L+  D P P P   ++LV+V+A  +   D  R          P V G + +G V
Sbjct: 7   TGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLG-TGAYHPPLVLGHEFSGTV 64

Query: 70  VAKGTSVTKFNTGDEVYGN------------IQDFNAEGKLKQL-----GALAEFIVVEE 112
              G+ V     GD V  N              +++       +     GA AE++ V  
Sbjct: 65  EEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPA 124

Query: 113 SLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKH 171
             + K P ++ +EEAA + P AV  A+   + AG   G T+ ++ GAG +G L IQ  K 
Sbjct: 125 RNLIKIPDHVDYEEAAMIEPAAV--ALHAVRLAGITLGDTVVVI-GAGTIGLLAIQWLKI 181

Query: 172 FYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK-----FDVLYDTIGDCK- 224
             GA  V+A      K+   +ELGAD  I+ ++   E + E       D++ +  G    
Sbjct: 182 -LGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPAT 240

Query: 225 --NSFVVAKDNAPIV-------DITWPPSHPRAIYSS-----LTVSGEILEKLRPF---- 266
              +  +A+    +V       D+T         +       LT+ G       PF    
Sbjct: 241 IEQALALARPGGKVVLVGIPYGDVTL----SEEAFEKILRKELTIQGSWNSYSAPFPGDE 296

Query: 267 -------IESGKLKAQIDPTGPYKFKDVIEAFRYLETGR-ARGKVVI 305
                  + SGK+K +   T     +D   AF  L       GKV++
Sbjct: 297 WRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  105 bits (263), Expect = 4e-26
 Identities = 89/318 (27%), Positives = 139/318 (43%), Gaps = 56/318 (17%)

Query: 16  LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKR-RQRPLFPSDFPAVPGCDMAGIVV---A 71
           L+LG+ P P P   + LV+V A +LN  + K   +RP       AVPG D AG+V    A
Sbjct: 14  LRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAERPD-----GAVPGWDAAGVVERAAA 68

Query: 72  KGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLP 131
            G+       G  V G          L  +GA AE + V    +A  P  +SF +AA+LP
Sbjct: 69  DGSGPAV---GARVVG----------LGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLP 115

Query: 132 LAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFV 190
           +A  TA+   +  G   G+ + + G +GGVG   +QLA      +HVVA   +P + E +
Sbjct: 116 VAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAAL--AGAHVVAVVGSPARAEGL 173

Query: 191 KELGADKVIDYRKTKYEDIEEK-FDVLYDTIGDCKNSFVVAKDN-AP---IVDITW---- 241
           +ELGA +V+        ++     D++ D++G        A +  AP   +V +      
Sbjct: 174 RELGAAEVV----VGGSELSGAPVDLVVDSVGG--PQLARALELLAPGGTVVSVGSSSGE 227

Query: 242 ----------PPSHPRAIYS----SLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDV 287
                          R +Y+            L +L   + +G+L  +I   G +   ++
Sbjct: 228 PAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSW--TEI 285

Query: 288 IEAFRYLETGRARGKVVI 305
            EA   L   R RGK V+
Sbjct: 286 DEAAEALLARRFRGKAVL 303

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score =  104 bits (262), Expect = 8e-26
 Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 12/198 (6%)

Query: 8   EEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSDFPAVPGCD 64
            E+GP EVL   D P P P   Q+ + V AA ++ +D++ R       FP + P VPG +
Sbjct: 7   HEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGE 66

Query: 65  MAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISF 124
           +AG+V A G  V     G  V  +             G  AE  V +   +   P  +  
Sbjct: 67  VAGVVDAVGPGVDPAWLGRRVVAHTGRAG--------GGYAELAVADVDSLHPVPDGLDL 118

Query: 125 EEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184
           E A ++    +TA+     A    G  + +   AGG+G+L++QLAK   GA+ V A    
Sbjct: 119 EAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKA-AGATVVGAAGGP 177

Query: 185 PKVEFVKELGADKVIDYR 202
            K   V+ LGAD  +DY 
Sbjct: 178 AKTALVRALGADVAVDYT 195

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  104 bits (261), Expect = 1e-25
 Identities = 77/336 (22%), Positives = 123/336 (36%), Gaps = 51/336 (15%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +     L+  + P+P P   ++L+++ A  +   D    +     S +P VPG ++ G V
Sbjct: 6   HAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEV 65

Query: 70  VAKGTSVTKFNTGD---------------------EVYGNIQDFNAEGKLKQLGALAEFI 108
           V  G  V     GD                     E                 G  AE++
Sbjct: 66  VEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTG---YTTQGGYAEYM 122

Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           V +       P  +   +AA L  A  T     + AG + G+ + ++ G GG+G L +Q 
Sbjct: 123 VADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGPRPGERVAVL-GIGGLGHLAVQY 181

Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFV 228
           A+   G   V  T S  K E  ++LGAD+V+D      E  E+      D I     S  
Sbjct: 182 ARAM-GFETVAITRSPDKRELARKLGADEVVDSGA---ELDEQAAAGGADVILVTVVSGA 237

Query: 229 VA-------KDNAPIVDITWPPSHP------------RAIYSSLTVSGEILEKLRPFIES 269
            A       +    IV +  P S P            ++I  S       L++   F   
Sbjct: 238 AAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAE 297

Query: 270 GKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           GK+K  I+    +      EA+  +E G  R + V+
Sbjct: 298 GKVKPMIE---TFPLDQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  101 bits (253), Expect = 2e-24
 Identities = 95/372 (25%), Positives = 152/372 (40%), Gaps = 82/372 (22%)

Query: 7   YEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSDFPAVP 61
            +   P   L + + P+P P+  ++L++V A       L+ +  +      FP   P V 
Sbjct: 6   LKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGEL----PFPP--PFVL 57

Query: 62  GCDMAGIVVAKGTSVT---KFNTGDEVYGNI------------------QDFNAEGKLKQ 100
           G +++G VV  G +V      + GD V G+                   +DF A  +LK 
Sbjct: 58  GHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKG 117

Query: 101 ---------------------LGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIE 139
                                +G LAE+ VV  + +A  P+++ + E+A L  A  TA  
Sbjct: 118 TLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYG 177

Query: 140 GFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADK 197
             K A   + G+T+ ++G  GGVG+  IQLAK F GAS ++A      K+   KELGA  
Sbjct: 178 ALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAF-GASPIIAVDVRDEKLAKAKELGATH 235

Query: 198 VIDYRKT----KYEDI--EEKFDVLYDTIG---DCKNSFVVAKDNAPIVDITWPPSHPRA 248
            ++  K        +I      DV+ + +G     K +  V +D    V +   P    A
Sbjct: 236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATA 295

Query: 249 -IYSSLTVSGEI-------------LEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYL 294
            I  +  V   I             L +L     SGKL  +   T  YK +++ EA+  L
Sbjct: 296 EIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENL 355

Query: 295 ETGRARGKVVIS 306
             G   G+ ++ 
Sbjct: 356 RKGLIHGRAIVE 367

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 97.8 bits (244), Expect = 3e-23
 Identities = 79/330 (23%), Positives = 124/330 (37%), Gaps = 48/330 (14%)

Query: 18  LGDFPLPTPQHDQLLVQVRAAALNPIDSKR-RQRPLFPSDFPAVPGCDMAGIVVAKGTSV 76
           L +FP+P P   ++L++V+A+ L   D          P+    +PG + AG+VVA G  V
Sbjct: 14  LREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGV 73

Query: 77  TKFNTGDEV----YGNI---------QDFNAEGKLKQL-----GALAEFIVVEESLIAKK 118
           T F  GD V    Y                   K         G  AE+++V E  +   
Sbjct: 74  THFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPL 133

Query: 119 PKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
           P ++SF + A L   + TA    +  G     T+ +V GAG VG   + LA+       +
Sbjct: 134 PDDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVV-GAGPVGLGALMLARALGAEDVI 192

Query: 179 VATTSTPKVEFVKELGADKVIDYRKTKYEDI-----EEKFDVLYDTIG------DCKNSF 227
               S  ++E  K LGAD VI+  +   ++I         DV  +  G          + 
Sbjct: 193 GVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGNTAARRLALEAV 252

Query: 228 -------VVAKDNAPIVDITWPPS-----HPRAIYSSLTVSGEILEKLRPFIESGKLKAQ 275
                  +V +     ++     S       R +  S   S   +E+   F+   KL+  
Sbjct: 253 RPWGRLVLVGEGGELTIE----VSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVD 308

Query: 276 IDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
              T  +      EA+     G   GKVV 
Sbjct: 309 RLVTHRFGLDQAPEAYALFAQG-ESGKVVF 337

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 97.2 bits (243), Expect = 4e-23
 Identities = 81/338 (23%), Positives = 136/338 (40%), Gaps = 48/338 (14%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSDFPAVPGCD 64
           Y   + L+L D P+P P   Q+LV+V  A      L+ ID       + P   P   G +
Sbjct: 7   YEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDG--VWGGILPYKLPFTLGHE 64

Query: 65  MAGIVVAKGTSVTKFNTGDEV--YGNIQDFN----AEGK-----------LKQLGALAEF 107
            AG V   G+ V     GD V  +             G+           +   G  AE+
Sbjct: 65  NAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEY 124

Query: 108 IVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA-GFKTGQTIFIVGGAGGVGTLVI 166
           ++V    + K P+ +   EAA L  A  TA    K A  +    +  +V G GG+G + +
Sbjct: 125 LLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAV 184

Query: 167 QLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE-----KFDVLYDTIG 221
           Q+ +    A+ +    S   ++  + LGAD V++      E++ E       D + D +G
Sbjct: 185 QILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVG 244

Query: 222 D---CKNSF-VVAKDNAPIV-------DITWPPSHPR--AIYSSLTVS-GEILEKLRPFI 267
                  +  ++AK    ++        +      P   ++  SL  +  E++E +    
Sbjct: 245 SDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVA-LA 303

Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           ESGK+K +I     +  +D  EA   L  GR  G+ V+
Sbjct: 304 ESGKVKVEIT---KFPLEDANEALDRLREGRVTGRAVL 338

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 94.9 bits (237), Expect = 2e-22
 Identities = 84/339 (24%), Positives = 132/339 (38%), Gaps = 70/339 (20%)

Query: 12  PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP-GCDMAGIVV 70
           P +  +L + PLP  +  ++LV+    +++P   +        S  P V  G  M G  V
Sbjct: 16  PPDDFELVEVPLPELKDGEVLVRTLYLSVDPY-MRGWMSDA-KSYSPPVQLGEPMRGGGV 73

Query: 71  AKGTSV-----TKFNTGDEVYG--NIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNIS 123
            +   V       F  GD V G    Q++               +V   S + K   ++ 
Sbjct: 74  GE---VVESRSPDFKVGDLVSGFLGWQEY--------------AVVDGASGLRKLDPSLG 116

Query: 124 FEEAASL-PLAV--QTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVV 179
              +A L  L +   TA  G    G  K G+T+ +   AG VG++V Q+AK   GA  VV
Sbjct: 117 LPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKL-LGA-RVV 174

Query: 180 ATTSTP-KVEFVK-ELGADKVIDYRKTKYED-----IEEKFDVLYDTIG----DCKNSFV 228
               +  K  ++  ELG D  I+Y+     +       +  DV +D +G    D   +  
Sbjct: 175 GIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEILDA--ALT 232

Query: 229 VAKDNAPIV---DI----TWPPSHPR----AIYSSLTVSG-----------EILEKLRPF 266
           +      I     I       P  P+     I   LT+ G           E L +L  +
Sbjct: 233 LLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKW 292

Query: 267 IESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           +  GKLK + D       ++  EAF  L TG+  GK+V+
Sbjct: 293 LAEGKLKYREDVV--EGLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 95.5 bits (238), Expect = 2e-22
 Identities = 83/353 (23%), Positives = 121/353 (34%), Gaps = 68/353 (19%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSDFPAVPGCD 64
           Y     ++L + P P P    +L++V A       L+     R   P  P     + G +
Sbjct: 7   YVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIY---RGGEPFVPPGDI-ILGHE 62

Query: 65  MAGIVVAKGTSVTKFNTGDEVYGN------------IQDFNAEGKLKQL----------G 102
             G VV  G  V  F  GD V                 ++N                  G
Sbjct: 63  FVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG 121

Query: 103 ALAEFIVV-EESLIAKKPKNISFEEAA-SLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGG 160
             AE++ V  +  +AK P  I  E AA + PLA        + A  + G T+ +VG AG 
Sbjct: 122 GFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAER-AAVRPGGTVVVVG-AGP 179

Query: 161 VGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIE-------EK 212
           +G L I LAK   GAS V+    +P ++E  KE G   V+          E         
Sbjct: 180 IGLLAIALAKL-LGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRG 238

Query: 213 FDVLYDTIG------DC-----KNSFVV-------AKDNAPIVDITWPPSHPRAIYSSLT 254
            DV+ + +G                 VV            P   +         +  SL 
Sbjct: 239 ADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVS---KELTLRGSLR 295

Query: 255 VSG-EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRAR-GKVVI 305
            SG E  E+    + SGK+  +   T      D  EA+      +    KVV+
Sbjct: 296 PSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVL 348

Length = 350

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 94.7 bits (236), Expect = 3e-22
 Identities = 85/347 (24%), Positives = 134/347 (38%), Gaps = 75/347 (21%)

Query: 7   YEEYGPKE--VLKLGDFPLPTPQHDQLLVQVRAAALNPID------SKRRQRPLFPSDFP 58
           Y ++G     VL+L   P+P P   ++LV++ AA +NP D      +   + PL     P
Sbjct: 3   YTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPL-----P 57

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-----GALAEFIVVEES 113
           AVPG +  G+VV  G+ V+    G  V               L     G   E++V    
Sbjct: 58  AVPGNEGVGVVVEVGSGVSGLLVGQRV---------------LPLGGEGTWQEYVVAPAD 102

Query: 114 LIAKKPKNISFEEAASL---PLAVQTAIEGFKTAGFKTGQTIFIVGGAG-GVGTLVIQLA 169
            +   P +IS E+AA L   PL   TA                I   A   VG ++IQLA
Sbjct: 103 DLIPVPDSISDEQAAMLYINPL---TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLA 159

Query: 170 KHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTK-YEDIEE-----KFDVLYDTIGD 222
           K   G    +      + VE +K LGAD+VID       + ++E        +  D +G 
Sbjct: 160 KLL-GF-KTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGG 217

Query: 223 CKNSFVVA--KDNAPIVDI----TWPPSHPRAIYSS--LTVSG----------------E 258
              + +    +    +V+       P   PR+++    +TV G                E
Sbjct: 218 ESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQE 277

Query: 259 ILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
              ++   +E+G L   +     +  +D  EA    E     GKV++
Sbjct: 278 TFAEVIKLVEAGVLTTPVGAK--FPLEDFEEAVAAAEQPGRGGKVLL 322

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 94.6 bits (236), Expect = 4e-22
 Identities = 65/223 (29%), Positives = 94/223 (42%), Gaps = 24/223 (10%)

Query: 4   AWYYEEYG-PKEVLKLGDFPLPTPQ-HDQLLVQVRAAALNPIDSKRRQ-----RPLFPSD 56
           A  Y E+G PKEVL+L  + +P P   +++LV++ AA +NP D  + Q     +P    +
Sbjct: 3   ALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPE 62

Query: 57  FPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIA 116
            PAV G +  G VV  G+ V     GD V               LG      VV    + 
Sbjct: 63  PPAVGGNEGVGEVVKVGSGVKSLKPGDWVI---------PLRPGLGTWRTHAVVPADDLI 113

Query: 117 KKPKNISFEEAASLPLAVQTA---IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY 173
           K P ++  E+AA+L +   TA   +E F     + G  +   G    VG  VIQLAK   
Sbjct: 114 KVPNDVDPEQAATLSVNPCTAYRLLEDFVKL--QPGDWVIQNGANSAVGQAVIQLAKLLG 171

Query: 174 GASHVVATTSTPKVEFVKEL---GADKVIDYRKTKYEDIEEKF 213
             +  V        E  + L   GAD V+   + +     E  
Sbjct: 172 IKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELL 214

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 94.3 bits (235), Expect = 4e-22
 Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 30/234 (12%)

Query: 11  GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIV 69
           G K+  ++ + P P P  D+++++V  A L   D  + Q   +P   +P + G ++ G V
Sbjct: 8   GFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQ-GFYPRMKYPVILGHEVVGTV 66

Query: 70  VAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-----------------GALAEFIVVEE 112
              G +V  F  GD V   +   +   +  +                  G  AE+  V+ 
Sbjct: 67  EEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKV 126

Query: 113 SLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHF 172
           + + K P N+S E A  +P        G + AG K G+T+ + G  GGVG   IQ+AK  
Sbjct: 127 TSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKA- 185

Query: 173 YGASHVVATTSTPKVEFVKELGADKVIDYRK-----TKYEDIEEKFDVLYDTIG 221
            GA  +  T+S  K + V +  AD VI   K      K        D++ +T+G
Sbjct: 186 LGAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKKIGGA----DIVIETVG 234

Length = 334

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 94.5 bits (236), Expect = 5e-22
 Identities = 97/371 (26%), Positives = 143/371 (38%), Gaps = 109/371 (29%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAAL----------NPIDSKRRQRPLFPSDFPA 59
           +GP + L+L + P+P P   ++LV+VRA  +            I         F    P 
Sbjct: 5   HGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGD-------FVVKEPM 56

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEV------------------YGNI---QDFNAEGKL 98
           V G + AG VVA G+ VT    GD V                  Y N+     F A   +
Sbjct: 57  VLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRY-NLCPDMRFAATPPV 115

Query: 99  KQLGALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGG 157
              G L  ++        K P N+S EE A + PL+V   +   + AG + G T+ + G 
Sbjct: 116 D--GTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSV--GVHACRRAGVRPGDTVLVFG- 170

Query: 158 AGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEK---- 212
           AG +G L   +AK F GA+ VV T     ++EF KELGA   ++ R     +  EK    
Sbjct: 171 AGPIGLLTAAVAKAF-GATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAEL 229

Query: 213 -----FDVLYDTIG------DCKNS------FV---VAKDNAPI---------VDI---- 239
                 DV+ +  G          +       V   + K    +         +DI    
Sbjct: 230 LGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVF 289

Query: 240 ----TWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLE 295
               T+    P AI   L  SG++   ++P I           T  +  +D +EAF    
Sbjct: 290 RYANTY----PTAI--ELLASGKV--DVKPLI-----------THRFPLEDAVEAFETAA 330

Query: 296 TGRARG-KVVI 305
            G+    KVVI
Sbjct: 331 KGKKGVIKVVI 341

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 91.5 bits (228), Expect = 5e-21
 Identities = 82/345 (23%), Positives = 128/345 (37%), Gaps = 64/345 (18%)

Query: 16  LKLGDFPLPTPQHDQLLVQVRAAAL-----------------NPIDSKRRQRPLFPSDFP 58
           L+  +   P P   ++LV+V A  +                   +    R   L     P
Sbjct: 13  LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKL-----P 67

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDE--VYGNI----------QDFNAEGKLKQLGAL-- 104
            V G ++ G VVA G        GD+  VY  I           D N   K + LG    
Sbjct: 68  LVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQD 127

Query: 105 ---AEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGV 161
              AE+++V  S     P  +    AA+L  +  TA    K           ++ GAGG+
Sbjct: 128 GGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGL 187

Query: 162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY-EDIEEKFDVLYDTI 220
           G + + L K    A+ +V      K+E  K  GAD V++       + I +      D +
Sbjct: 188 GLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGGGVDAV 247

Query: 221 GDCKNS--------FVVAKDNAPIV------DITWPPSHPRAIYSSLTVSGEI---LEKL 263
            D  N+         ++AK    ++      + T P   P     +LT+ G     LE+L
Sbjct: 248 IDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPL--PLLPLRALTIQGSYVGSLEEL 305

Query: 264 RPFIE---SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           R  +    +GKLK    P       DV +A   L+ G+  G+ V+
Sbjct: 306 RELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVL 348

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 91.3 bits (227), Expect = 5e-21
 Identities = 90/334 (26%), Positives = 138/334 (41%), Gaps = 58/334 (17%)

Query: 7   YEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMA 66
           + ++G  EVL+  +F    P  +++ V+ +A  +N ID+  R     P   P+  G + A
Sbjct: 7   FHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAA 66

Query: 67  GIVVAKGTSVTKFNTGDEV-YGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFE 125
           G+V   G+ V     GD V Y              LGA +    V     A  P  ISFE
Sbjct: 67  GVVSKVGSGVKHIKVGDRVVYAQ----------SALGAYSSVHNVPADKAAILPDAISFE 116

Query: 126 EAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184
           +AA+  L   T      KT   K  +       AGGVG +  Q AK   GA  +    S 
Sbjct: 117 QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGSA 175

Query: 185 PKVEFVKELGADKVIDYRKTKYEDI---------EEKFDVLYDTIG--------DC--KN 225
            K +  K+ GA +VI+YR+   E+I          +K  V+YD++G        DC  + 
Sbjct: 176 QKAQRAKKAGAWQVINYRE---ENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRR 232

Query: 226 SFVVAKDNA--PI--VD-----------ITWPPSHPRAIYSSLTVSGEILE---KLRPFI 267
             +V+  NA  P+  V+           +T P     ++   +T   E+ E   +L   I
Sbjct: 233 GLMVSFGNASGPVTGVNLGILNQKGSLYVTRP-----SLQGYITTREELTEASNELFSLI 287

Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARG 301
            SG +K  +     +  KD   A   LE+   +G
Sbjct: 288 ASGVIKVDVAEQQKFPLKDAQRAHEILESRATQG 321

Length = 327

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 89.3 bits (222), Expect = 3e-20
 Identities = 82/338 (24%), Positives = 129/338 (38%), Gaps = 78/338 (23%)

Query: 17  KLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAV-PGCDMAGIVVAKG-- 73
           +L +  +P P   Q+L++    +L+P    R      PS  P V  G  M G  VAK   
Sbjct: 28  RLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDA--PSYAPPVELGEVMVGGTVAKVVA 85

Query: 74  TSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLA 133
           ++   F  GD V G                  E+ + +   + K   +      A L   
Sbjct: 86  SNHPGFQPGDIVVGV-------------SGWQEYAISDGEGLRKLDPS-----PAPLSAY 127

Query: 134 V-------QTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP 185
           +        TA  G    G  K G+T+ +   AG VG++V Q+AK       VV      
Sbjct: 128 LGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKL--KGCRVVGIAGGA 185

Query: 186 -KVEFVK-ELGADKVIDYRKTKYEDIEEKF--------DVLYDTIG--------DCKNSF 227
            K +F+  ELG D  IDY+    ED  +          DV ++ +G           N F
Sbjct: 186 EKCDFLTEELGFDAGIDYKA---EDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLF 242

Query: 228 -------VVAKDNAPIVDITWPPSHPRAIYSSLTVSG------------EILEKLRPFIE 268
                   +++ NAP +    P   P  +   L V G            E L +L  +++
Sbjct: 243 ARIPVCGAISQYNAPELP-PGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVK 301

Query: 269 SGKLKAQIDPT-GPYKFKDVIEAFRYLETGRARGKVVI 305
            GK++ +     G    ++  EAF  L +G+  GK+V+
Sbjct: 302 EGKIQYRETIVDG---LENAPEAFIGLLSGKNFGKLVV 336

Length = 340

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 84.0 bits (208), Expect = 6e-20
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 20/131 (15%)

Query: 193 LGADKVIDYRKTKYEDI--EEKFDVLYDTIGD---CKNSFVVAKD------NAPIVDITW 241
           LGAD+VIDY    +E+    E  DV+ DT+G     +    +           P + ++ 
Sbjct: 1   LGADEVIDYTTEDFEEATAGEGVDVVLDTVGGETLLRALLALKPGGRLVSIGGPDLLLSV 60

Query: 242 PPSHPRAI-------YSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYL 294
                            S   +G  L +L   +E+GKL+  ID    +  ++  EA RYL
Sbjct: 61  AAKAGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKLRPVIDRV--FPLEEAAEAHRYL 118

Query: 295 ETGRARGKVVI 305
           E+GRARGKVV+
Sbjct: 119 ESGRARGKVVL 129

Length = 129

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 86.8 bits (216), Expect = 3e-19
 Identities = 86/353 (24%), Positives = 144/353 (40%), Gaps = 84/353 (23%)

Query: 12  PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID---------SKRRQRPLFPSDFPAVPG 62
            +  L L D P+P P  + +L++V+  A+   D         +++          P V G
Sbjct: 9   AEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPV------PMVVG 62

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKL------------KQL--------- 101
            +  G VV  G+ VT F  GD V G       EG +            + L         
Sbjct: 63  HEFVGEVVEVGSEVTGFKVGDRVSG-------EGHIVCGHCRNCRAGRRHLCRNTKGVGV 115

Query: 102 ---GALAEFIVVEESLIAKKPKNISFEEAASL-PL--AVQTAIEGFKTAGFKTGQTIFIV 155
              GA AE++V+    + K P +I  + AA   P   AV TA+     +    G+ + I 
Sbjct: 116 NRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTAL-----SFDLVGEDVLIT 170

Query: 156 GGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDI----- 209
            GAG +G +   +AKH  GA HVV T  +  ++E  +++GA + ++  K    D+     
Sbjct: 171 -GAGPIGIMAAAVAKH-VGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELG 228

Query: 210 -EEKFDVLYDTIG--DCKNSFVVAKDNAPIVDITWPPSHPRAI------YSSLTVSG--- 257
             E FDV  +  G        +   ++   + +   P    AI      +  LT+ G   
Sbjct: 229 MTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYG 288

Query: 258 -EILE---KLRPFIESGKLKAQIDP--TGPYKFKDVIEAFRYLETGRARGKVV 304
            E+ E   K+   ++SG     + P  T  +   D  + F  + +G++ GKV+
Sbjct: 289 REMFETWYKMSALLQSG---LDLSPIITHRFPIDDFQKGFEAMRSGQS-GKVI 337

Length = 341

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 85.0 bits (211), Expect = 5e-19
 Identities = 53/175 (30%), Positives = 70/175 (40%), Gaps = 20/175 (11%)

Query: 49  QRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFI 108
                    P  PG    G VV  G+ VT F  GD V+               G  AE +
Sbjct: 12  STGTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC-------------FGPHAERV 58

Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           VV  +L+   P  +  E AA   LA  TA+ G + A  + G+ + +V G G VG L  QL
Sbjct: 59  VVPANLLVPLPDGLPPERAALTALA-ATALNGVRDAEPRLGERVAVV-GLGLVGLLAAQL 116

Query: 169 AKHFYGASHVVAT-TSTPKVEFVKELG-ADKVIDYRKTKYEDIEEKFDVLYDTIG 221
           AK   GA  VV       + E  + LG AD V      +        DV+ +  G
Sbjct: 117 AKA-AGAREVVGVDPDAARRELAEALGPADPVAADTADEIGGRG--ADVVIEASG 168

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 85.3 bits (212), Expect = 8e-19
 Identities = 64/254 (25%), Positives = 98/254 (38%), Gaps = 52/254 (20%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID-----------SKRRQRPLFPSDFP 58
           +G K++ ++ + P P  +  ++ ++V    +   D                  L     P
Sbjct: 7   HGRKDI-RVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAP 65

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEV-----------------------YGNIQDFNAE 95
              G + +G+VV  G+ VT F  GD V                                 
Sbjct: 66  VTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGG 125

Query: 96  GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFI 154
           G     G  AE++VV    + K P N+  EEAA + PLAV  A    + +GFK G T  +
Sbjct: 126 G-----GGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV--AWHAVRRSGFKPGDTALV 178

Query: 155 VGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDI---- 209
           + GAG +G L I   K   GAS ++ +  S  + E  +ELGA  V+D  +          
Sbjct: 179 L-GAGPIGLLTILALKAA-GASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKL 236

Query: 210 --EEKFDVLYDTIG 221
                 DV +D  G
Sbjct: 237 TGGGGVDVSFDCAG 250

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 84.9 bits (211), Expect = 1e-18
 Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 40/238 (16%)

Query: 4   AWYYEEYGPKEV--LKLGDFPLPTPQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSD 56
           A   E+ GP E   L+L + P+P P   ++L++V A       L+ ++       L P  
Sbjct: 3   AMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGD-----LPPPK 57

Query: 57  FPAVPGCDMAGIVVAKGTSVTKFNTGDEV------------------YGNI-QDFNAEGK 97
            P +PG ++ G V A G  VT+F+ GD V                    N+  +    G 
Sbjct: 58  LPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY 117

Query: 98  LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGG 157
               G  AE++V +E      P++   EEAA L  A        K AG K GQ + +  G
Sbjct: 118 TVD-GGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRALKLAGLKPGQRLGLY-G 175

Query: 158 AGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFD 214
            G    L +Q+A++    + V A T + +  E  +ELGAD   D      +   E  D
Sbjct: 176 FGASAHLALQIARYQG--AEVFAFTRSGEHQELARELGADWAGDS----DDLPPEPLD 227

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 84.2 bits (209), Expect = 2e-18
 Identities = 96/350 (27%), Positives = 150/350 (42%), Gaps = 83/350 (23%)

Query: 16  LKLGDFPLPTPQHDQLLVQVRAAALNPID---------SKRRQRPLFPSDFPAVPGCDMA 66
            +L + P+P P   ++L++V AA++   D         ++ R +P      P + G + A
Sbjct: 13  AELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKP------PLIFGHEFA 66

Query: 67  GIVVAKGTSVTKFNTGDEVYGNIQDFNAEG-------------------KLKQL-----G 102
           G VV  G  VT+   GD V       +AE                      K L     G
Sbjct: 67  GEVVEVGEGVTRVKVGDYV-------SAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDG 119

Query: 103 ALAEFIVVEESLIAKKPKNISFEEAASL-PL--AVQTAIEGFKTAGFKTGQTIFIVGGAG 159
             AE++VV E  + K  K+I  E A+   PL  AV T       AG  +G+++ I  G G
Sbjct: 120 CFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTV-----LAGDVSGKSVLIT-GCG 173

Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKF----- 213
            +G + I +AK   GAS V+A+   P  +E  K++GAD VI+ R+    +++        
Sbjct: 174 PIGLMAIAVAKA-AGASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGV 232

Query: 214 DVLYDTIGDCK--NSFVVAKDNAPIVDITWPPSHP-------RAIYSSLTVSG------- 257
           DV+ +  G+ K     + A      V I   P  P         I+  LTV G       
Sbjct: 233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMF 292

Query: 258 EILEKLRPFIESGKLKAQIDP--TGPYKFKDVIEAFRYLETGRARGKVVI 305
           E   ++   ++SGK+   + P  T     +D  EAF  + +G+  GKVV+
Sbjct: 293 ETWYQVSALLKSGKV--DLSPVITHKLPLEDFEEAFELMRSGKC-GKVVL 339

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 82.9 bits (206), Expect = 5e-18
 Identities = 61/195 (31%), Positives = 88/195 (45%), Gaps = 32/195 (16%)

Query: 54  PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV-YGNIQD--------------------- 91
           P+ +P VPG ++ GIVVA G+ VTKF  GD V  G   D                     
Sbjct: 50  PTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVV 109

Query: 92  ----FNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFK 147
                  +G + Q G  A+ IVV+E  + K P+ +    AA L  A  T     K  G  
Sbjct: 110 TYNGKYPDGTITQ-GGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVG 168

Query: 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFVKELGADKVIDYRKTK- 205
            G+ + +VG  GG+G L ++ AK   GA  V A + S  K E   +LGAD+ I  +  + 
Sbjct: 169 PGKRVGVVG-IGGLGHLAVKFAKAL-GA-EVTAFSRSPSKKEDALKLGADEFIATKDPEA 225

Query: 206 YEDIEEKFDVLYDTI 220
            +      D++ DT+
Sbjct: 226 MKKAAGSLDLIIDTV 240

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 83.0 bits (206), Expect = 6e-18
 Identities = 89/335 (26%), Positives = 136/335 (40%), Gaps = 52/335 (15%)

Query: 15  VLKLGDFPLPTPQHDQLLVQVRAAAL--NPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAK 72
            L++ D P P P   ++LV+V+   +  + +     + P     +P + G +++G VV  
Sbjct: 11  RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFAS--YPRILGHELSGEVVEV 68

Query: 73  GTSVTKFNTGDEVYGN------------IQDFNAEGKLKQL-----GALAEFIVVEESLI 115
           G  V     GD V  +                N    L+ L     G  AE+IVV    +
Sbjct: 69  GEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPADAL 128

Query: 116 AKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
              P+ +S ++AA + PLA+       + AG   G T+ +V GAG +G  VIQ+AK   G
Sbjct: 129 -LVPEGLSLDQAALVEPLAI--GAHAVRRAGVTAGDTVLVV-GAGPIGLGVIQVAKA-RG 183

Query: 175 ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI------EEKFDVLYDTIGDCKNSFV 228
           A  +V      ++EF +ELGAD  I+                E  DV+ D  G+   S  
Sbjct: 184 ARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATGN-PASME 242

Query: 229 VAKDNA--------------PIVDITWPPSHPR--AIYSSLTVSGEILEKLRPFIESGKL 272
            A +                P V    P  H +   I  S   + E    +   +ESGK+
Sbjct: 243 EAVELVAHGGRVVLVGLSKGP-VTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKV 301

Query: 273 KAQIDPTGPYKFKDVIEAFRYLETGRARG-KVVIS 306
             +   T  + F+DV EAF   E       KV+I 
Sbjct: 302 DPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIE 336

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 82.2 bits (204), Expect = 1e-17
 Identities = 67/255 (26%), Positives = 99/255 (38%), Gaps = 68/255 (26%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +   + L++ +  L  P   ++LV++ AA L   D       L P+  PAV G + AG+V
Sbjct: 7   HEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDL-PAPLPAVLGHEGAGVV 65

Query: 70  VAKGTSVTKFNTGDEV---------------------------------YGNIQDFNAEG 96
              G  VT    GD V                                     + F A+G
Sbjct: 66  EEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADG 125

Query: 97  K----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG--FKTAGFKTGQ 150
           +    +  LG  AE+ VV E+ + K   +I  + AA L   V T + G    TA  + G 
Sbjct: 126 EPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGV-GAVVNTARVRPGD 184

Query: 151 TIFIVGGAGGVGTLVIQ---------------------LAKHFYGASHVVATTSTPKVEF 189
           T+ ++G  GGVG   IQ                     LA+ F GA+H V  +    VE 
Sbjct: 185 TVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRF-GATHTVNASEDDAVEA 242

Query: 190 VKEL----GADKVID 200
           V++L    GAD   +
Sbjct: 243 VRDLTDGRGADYAFE 257

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 81.3 bits (201), Expect = 3e-17
 Identities = 59/226 (26%), Positives = 85/226 (37%), Gaps = 44/226 (19%)

Query: 26  PQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV 85
           P+  ++ ++V A  +   D         P+  P + G + AGIV + G  VT    GD+V
Sbjct: 23  PKAGEVRIKVVATGVCHTDLHVID-GKLPTPLPVILGHEGAGIVESIGPGVTTLKPGDKV 81

Query: 86  Y------------------------------GNIQD----FNAEGK--LKQLG--ALAEF 107
                                          G + D    F  +GK     LG    AE+
Sbjct: 82  IPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEY 141

Query: 108 IVVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVGGAGGVGTLVI 166
            VV E  +AK   +   E+   +     T       TA    G T   V G GGVG  VI
Sbjct: 142 TVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGST-CAVFGLGGVGLSVI 200

Query: 167 QLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEE 211
              K   GAS ++A      K E  K+LGA + I+  + + + I E
Sbjct: 201 MGCK-AAGASRIIAVDINKDKFEKAKQLGATECIN-PRDQDKPIVE 244

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 78.9 bits (195), Expect = 9e-17
 Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 27/210 (12%)

Query: 11  GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVV 70
           GP  V +L + P P P   ++L++V AA +   D    +    P + P V G + +G +V
Sbjct: 10  GPGNV-ELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIV 68

Query: 71  AKGTSVTKFNTGDEVYGNIQ-------------DFN--AEGK---LKQLGALAEFIVVEE 112
             G  V  +  GD V                  D+N     K    +  G  AE+++V E
Sbjct: 69  EVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPE 128

Query: 113 SLIAKKPKNISFEEAA-SLPLAVQT-AIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAK 170
             + + P+N+S E AA + PLAV   A+   + +G + G T+ +V G G +G L  Q+AK
Sbjct: 129 ESLHELPENLSLEAAALTEPLAVAVHAV--AERSGIRPGDTV-VVFGPGPIGLLAAQVAK 185

Query: 171 HFYGASHVVATTSTPKVEF--VKELGADKV 198
              GA+ VV  T   +V     KELGAD V
Sbjct: 186 L-QGATVVVVGTEKDEVRLDVAKELGADAV 214

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 65/241 (26%), Positives = 101/241 (41%), Gaps = 42/241 (17%)

Query: 3   NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAV 60
            A   EE      L L   PL       +L++V  ++LN  D  +      +   ++P  
Sbjct: 2   KALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTR-NYPHT 60

Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEV----YGNIQDFNAEGKLKQLGA-----LAEFIVVE 111
           PG D AG VV+  +   +F  GDEV    Y              LG       AE++ V 
Sbjct: 61  PGIDAAGTVVS--SDDPRFREGDEVLVTGYD-------------LGMNTDGGFAEYVRVP 105

Query: 112 ESLIAKKPKNISFEEAASLPLAVQTA---IEGFKTAGFKTGQTIFIVGGA-GGVGTLVIQ 167
              +   P+ +S  EA  L  A  TA   +   +  G        +V GA GGVG++ + 
Sbjct: 106 ADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVA 165

Query: 168 -LAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTI 220
            LAK  Y    VVA T    + +++K LGA +V+D R+   ++ +      ++    DT+
Sbjct: 166 ILAKLGY---TVVALTGKEEQADYLKSLGASEVLD-REDLLDESKKPLLKARWAGAIDTV 221

Query: 221 G 221
           G
Sbjct: 222 G 222

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 76.9 bits (190), Expect = 6e-16
 Identities = 77/344 (22%), Positives = 134/344 (38%), Gaps = 68/344 (19%)

Query: 11  GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVV 70
            P   L+L +  +P P   ++L++V A  +   D+  ++  +    +P VPG ++ G + 
Sbjct: 8   EPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRID 67

Query: 71  AKGTSVTKFNTGDEV-------------YGNIQDFN--AEGKLKQL---GALAEFIVVEE 112
           A G  V+++  GD V                  DF     GK+  +   G  AE+++   
Sbjct: 68  AVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPA 127

Query: 113 SLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHF 172
             +A+ P ++   EAA L  A  T     + +G K G  +  V G GG+G L +Q A   
Sbjct: 128 EALARIPDDLDAAEAAPLLCAGVTTFNALRNSGAKPGDLV-AVQGIGGLGHLAVQYAAKM 186

Query: 173 YGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGDCK-- 224
            G   V  +  + K +  ++LGA   ID   T  ED+ E         ++  T  + K  
Sbjct: 187 -GFRTVAISRGSDKADLARKLGAHHYID---TSKEDVAEALQELGGAKLILATAPNAKAI 242

Query: 225 -----------NSFVVAKDNAPI-----VDIT-------WPPSHPRAIYSSLTVSGEILE 261
                         ++     P+       I        WP         +L  S   L 
Sbjct: 243 SALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSA--LH 300

Query: 262 KLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            +RP +E+            +  +   EA+  + +G+AR +VV+
Sbjct: 301 GVRPMVET------------FPLEKANEAYDRMMSGKARFRVVL 332

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 76.8 bits (189), Expect = 8e-16
 Identities = 88/349 (25%), Positives = 138/349 (39%), Gaps = 70/349 (20%)

Query: 12  PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID---------SKRRQRPLFPSDFPAVPG 62
           P    +L + P+P P   ++L++V A ++   D         ++ R +P      P V G
Sbjct: 7   PGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKP------PQVVG 60

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAE------GK-----------LKQLGALA 105
            ++AG VV  G  V     GD V         +      G+           +   G  A
Sbjct: 61  HEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFA 120

Query: 106 EFIVVEESLIAKKPKNISFEEAASL-PL--AVQTAIEGFKTAGFKTGQTIFIVGGAGGVG 162
           E+ VV    I K PK+I  E A    PL  AV T +     +G        +V GAG +G
Sbjct: 121 EYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVLA-GPISGKSV-----LVTGAGPIG 174

Query: 163 TLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDI------EEKFDV 215
            + I +AK   GA  V+ +  +  ++E  K++GA  V++  K             E  DV
Sbjct: 175 LMAIAVAKA-SGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDV 233

Query: 216 LYDTIGDCK--NSFVVAKDNAPIVDITWPPSHP-------RAIYSSLTVSG-------EI 259
             +  G  K     + A      V +   P          + I+  LT+ G       E 
Sbjct: 234 FLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFET 293

Query: 260 LEKLRPFIESGKLKAQIDP--TGPYKFKDVIEAFRYLETGRARGKVVIS 306
              +   I+SGKL   +DP  T  +KF    + F  + +G+  GKV++S
Sbjct: 294 WYTVSRLIQSGKL--DLDPIITHKFKFDKFEKGFELMRSGQT-GKVILS 339

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 56/237 (23%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDF------ 57
           A  YEE+G  E L++ + P P P  D ++V+V A  +         R    SD+      
Sbjct: 3   AAVYEEFG--EPLEIREVPDPEPPPDGVVVEVEACGVC--------R----SDWHGWQGH 48

Query: 58  ------PAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFN-AEGKLKQL--------- 101
                 P VPG + AG+VV  G  V+++  GD V      F    G              
Sbjct: 49  DPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRV---TVPFVLGCGTCPYCRAGDSNVCE 105

Query: 102 ----------GALAEFIVVEES---LIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFK 147
                     G+ AE++ V  +   L+ + P ++ F  AA L     TA       A  K
Sbjct: 106 HQVQPGFTHPGSFAEYVAVPRADVNLV-RLPDDVDFVTAAGLGCRFATAFRALVHQARVK 164

Query: 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKT 204
            G+ +  V G GGVG   + +A    GA  +       K+E  +ELGA   ++  + 
Sbjct: 165 PGEWV-AVHGCGGVGLSAVMIASAL-GARVIAVDIDDDKLELARELGAVATVNASEV 219

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 74.7 bits (184), Expect = 5e-15
 Identities = 69/259 (26%), Positives = 95/259 (36%), Gaps = 74/259 (28%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID----SKRRQRPLFPSDFPAVPGCDM 65
           Y     L + +  L  P   ++LV++ AA L   D    +  R RPL     P   G + 
Sbjct: 15  YADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL-----PMALGHEA 69

Query: 66  AGIVVAKGTSVTKFNTGDEVY-------GNIQ--------------DFNAEGKL------ 98
           AG+VV  G  VT    GD V        G+ +                N  G L      
Sbjct: 70  AGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRR 129

Query: 99  ---------KQLG--ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG-FKTAGF 146
                      LG  A AE+ VV    + K  K++  E AA    AV T +     TAG 
Sbjct: 130 LRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGV 189

Query: 147 KTGQTIFIVGGAGGVG------------TLVI---------QLAKHFYGASHVVATTSTP 185
           + GQ++ +VG  GGVG            + V+          LA+   GA+  V      
Sbjct: 190 RPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLALAREL-GATATVNAGDPN 247

Query: 186 KVEFVKEL---GADKVIDY 201
            VE V+EL   G D   + 
Sbjct: 248 AVEQVRELTGGGVDYAFEM 266

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 83/365 (22%), Positives = 134/365 (36%), Gaps = 89/365 (24%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
               + L++ +  L  P+  ++LV++ A  +   D+        P  FPAV G + AGIV
Sbjct: 9   REAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSG-DDPEGFPAVLGHEGAGIV 67

Query: 70  VAKGTSVTKFNTGDEVYGNIQDFNAE-GKLKQ---------------------------- 100
            A G  VT    GD V   I  F  E G+ K                             
Sbjct: 68  EAVGEGVTSVKPGDHV---ILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRL 124

Query: 101 ------------LGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG--FKTAGF 146
                           AE+ VV E  + K   +   E+A  L   V T I G    TA  
Sbjct: 125 SGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGI-GAVVNTAKV 183

Query: 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTK 205
           + G T+ +  G GGVG   IQ AK   GA  ++A   +  K+E  K+ GA   ++ +  +
Sbjct: 184 EPGDTVAVF-GLGGVGLAAIQGAK-AAGAGRIIAVDINPEKLELAKKFGATHFVNPK--E 239

Query: 206 YEDIEEKF--------DVLYDTIGDCKN------------SFVVAKDNAPIVDITWPPSH 245
            +D+ E          D  ++ +G+ +             + V+        +I    + 
Sbjct: 240 VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEI---STR 296

Query: 246 PRAIYSSLTVSGEILEKLRP------FIE---SGKLKAQIDP--TGPYKFKDVIEAFRYL 294
           P  + +     G      RP       ++   +GKL   +D   T     +D+ EAF  +
Sbjct: 297 PFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKL--PLDRLVTHTIPLEDINEAFDLM 354

Query: 295 ETGRA 299
             G++
Sbjct: 355 HEGKS 359

Length = 366

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 72.2 bits (177), Expect = 4e-14
 Identities = 91/370 (24%), Positives = 143/370 (38%), Gaps = 89/370 (24%)

Query: 5   WYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRP-----LFP--SDF 57
           W Y E      L++ D P+P  + D++L++V+A  +   D    +       L+P  ++F
Sbjct: 34  WRYPE------LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEF 87

Query: 58  PAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQ------------DFNAEGKLKQLG--- 102
           P V G + +G+V   G +V  F  GD V                   N    LK+LG   
Sbjct: 88  PVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSA 147

Query: 103 --ALAEFIVVEE-------SLIAKKPKNISFEEAASLPLAVQTAIEGF--KTAGFKTGQT 151
             A AE+I V          L     ++ +FE A +L      A  G   +  GF+ G  
Sbjct: 148 DGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAY 206

Query: 152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIE 210
           + +V GAG +G   I LAK   GAS V+A   +  +    KE+GAD V +  K +     
Sbjct: 207 V-VVYGAGPIGLAAIALAKA-AGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSG 264

Query: 211 EKFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRP----- 265
           EK  V+  T G   +  V A    P    T P      +  S+ ++G+I+   R      
Sbjct: 265 EK--VMEVTKGWGADIQVEAAGAPP---ATIP-----QMEKSIAINGKIVYIGRAATTVP 314

Query: 266 ------------------------------FIESGKLKAQIDPTGPYKFKDVIEAFRYLE 295
                                          + SGK+      T  +  + ++EA +   
Sbjct: 315 LHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIK-AA 373

Query: 296 TGRARGKVVI 305
           + R  GK+ I
Sbjct: 374 SERTDGKITI 383

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 51/244 (20%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID-----------SKRRQRPLFPSDFP 58
           +   + L++ + P P P   ++ V+V A  +   D            + R+        P
Sbjct: 4   HAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLRE--------P 54

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEV------YGNIQDFNAEGKLKQL----------- 101
            V G +++G+V A G  VT    G  V           D+   G+               
Sbjct: 55  MVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMR 114

Query: 102 -----GALAEFIVVEESLIAKKPKNISFEEAA-SLPLAVQTAIEGFKTAGFKTGQTIFIV 155
                G   E++VV+ S     P  +S   AA + PLAV  A+     AG   G+ + + 
Sbjct: 115 FPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAV--ALHAVNRAGDLAGKRVLVT 172

Query: 156 GGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRK---TKYEDIEE 211
            GAG +G LV+  A+   GA+ +VAT      +   + +GAD+ ++  +     Y   + 
Sbjct: 173 -GAGPIGALVVAAARR-AGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKG 230

Query: 212 KFDV 215
            FDV
Sbjct: 231 DFDV 234

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 68.1 bits (167), Expect = 7e-13
 Identities = 77/348 (22%), Positives = 133/348 (38%), Gaps = 59/348 (16%)

Query: 10  YGPKEVLKLGDFPLPTPQH-DQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGI 68
            GP ++  L + P P  Q     +V+V A ++   D    +  +  +    + G +  G 
Sbjct: 7   LGPGKIG-LEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGE 65

Query: 69  VVAKGTSVTKFNTGDEV------------------YGNIQDFNAEGKL--KQLGALAEFI 108
           VV  G+ V +   GD V                  + + ++     KL  +  G  AE++
Sbjct: 66  VVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYV 125

Query: 109 VVEE--SLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVI 166
            V      +AK P  +  E+A  L   + T   G + AG K G T+ ++G AG VG   +
Sbjct: 126 RVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAVIG-AGPVGLCAV 184

Query: 167 QLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKN 225
             A+   GA+ ++A  S P +++  KE GA  +I+ +     DI E+  +L  T G   +
Sbjct: 185 AGARL-LGAARIIAVDSNPERLDLAKEAGATDIINPKN---GDIVEQ--ILELTGGRGVD 238

Query: 226 SFVVAKDNAPIVDITWPPSHPRAIYS--------------------SLTVSG------EI 259
             + A       +       P    +                    +LT           
Sbjct: 239 CVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRAR 298

Query: 260 LEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARG-KVVIS 306
           + +L   IE GK+      T  +   D+++A+R  +       KVVI 
Sbjct: 299 MPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 67.7 bits (166), Expect = 1e-12
 Identities = 55/229 (24%), Positives = 89/229 (38%), Gaps = 48/229 (20%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +GP +  ++ +  L  P+  ++LV++ A+ L   D       L    +P + G + AG+V
Sbjct: 8   WGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHEGAGVV 67

Query: 70  VAKGTSVTKFNTGDEV-----------------YGNIQDFNAE----------------- 95
              G  VT    GD V                   N+ D  A                  
Sbjct: 68  TKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFHAD 127

Query: 96  ----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF----KTAGFK 147
               G++  LG  +E+ VV E+ + K   +I  ++A  +   V T   G+      A  +
Sbjct: 128 GQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPT---GWGSAVNIADVR 184

Query: 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGA 195
            G T+ ++ G GGVG   +Q A    GA  V+A      K E   + GA
Sbjct: 185 PGDTVVVM-GIGGVGINAVQGAAV-AGARKVIAVDPVEFKREQALKFGA 231

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 5/111 (4%)

Query: 102 GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGV 161
           G +AE  +V      K P+ +   +A+S+  A  T  +  K +G K GQ I I G AGG+
Sbjct: 116 GGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYG-AGGL 174

Query: 162 GTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEE 211
           G L +Q AK+ + A  V+A      K+   KE+GAD  I+ ++   ED+ +
Sbjct: 175 GNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKRV--EDVAK 222

Length = 338

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 8/69 (11%)

Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTK-YEDIEEK----- 212
           GVG   +QLAK   GA+ V+A   +  K+E  KELGAD VI+YR     E + E      
Sbjct: 1   GVGLAAVQLAKAL-GAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRG 59

Query: 213 FDVLYDTIG 221
            DV+ D +G
Sbjct: 60  VDVVIDCVG 68

Length = 131

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 66.4 bits (162), Expect = 3e-12
 Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 38/226 (16%)

Query: 20  DFPLPTPQH-DQLLVQVRAAALNPIDSKRRQRPLFPSD---FPAVPGCDMAGIVVAKGTS 75
           + P+P  +H D +LV+V ++ L   D  R    +F +    +P   G + +G V A G+ 
Sbjct: 16  ESPIPEIKHQDDVLVKVASSGLCGSDIPR----IFKNGAHYYPITLGHEFSGYVEAVGSG 71

Query: 76  VTKFNTGDEV------------------YGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
           V   + GD V                  Y     ++  G  ++ G  AE+IVV+   +  
Sbjct: 72  VDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFA 130

Query: 118 KPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS 176
            P ++  E+ A + P+ V   +  F  A    G+ + I+G AG +G L IQ A    GA 
Sbjct: 131 LPTDMPIEDGAFIEPITV--GLHAFHLAQGCEGKNVIIIG-AGTIGLLAIQCAVAL-GAK 186

Query: 177 HVVATTSTP-KVEFVKELGADKVIDYRKTKYEDI-----EEKFDVL 216
            V A      K+   K LGA +  + R+     I     E +FD L
Sbjct: 187 SVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQL 232

Length = 347

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 64.9 bits (159), Expect = 7e-12
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 15/151 (9%)

Query: 56  DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLI 115
            +P +PG D AG VV+  +   +F  GDEV            +   G  +++  V    +
Sbjct: 55  SYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLG----VSHDGGYSQYARVPADWL 108

Query: 116 AKKPKNISFEEAASLPLAVQTA---IEGFKTAGFKTGQTIFIVGGA-GGVGTLVIQ-LAK 170
              P+ +S  EA +L  A  TA   +   +  G        +V GA GGVG+L +  L+K
Sbjct: 109 VPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSK 168

Query: 171 HFYGASHVVA-TTSTPKVEFVKELGADKVID 200
             Y    VVA T    + +++KELGA +VID
Sbjct: 169 LGY---EVVASTGKAEEEDYLKELGASEVID 196

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 62/248 (25%), Positives = 94/248 (37%), Gaps = 43/248 (17%)

Query: 11  GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGI 68
           GP + L++ + PLP  +   +LV+VR A +   D  +   +RP  P   P + G +  G 
Sbjct: 8   GPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVP--LPIILGHEGVGR 65

Query: 69  VVAKGTSVT------KFNTGDEVYGN--------------------------IQDFNAEG 96
           VVA G  VT          GD V  +                           +    + 
Sbjct: 66  VVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDP 125

Query: 97  KLKQLGALAEFIVVE-ESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKT-GQTIFI 154
            L   G  AE I +   + I + P N+  E AA    A+ T +     AG    G T+ +
Sbjct: 126 HL--SGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVV 183

Query: 155 VGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF 213
            G AG +G   +  AK   GA  V+    +P ++E  +E GAD  ID  +          
Sbjct: 184 QG-AGPLGLYAVAAAKLA-GARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIV 241

Query: 214 DVLYDTIG 221
             +    G
Sbjct: 242 RDITGGRG 249

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 19/183 (10%)

Query: 22  PLPTPQHDQLLVQVRAAALNP--IDSKRRQRPLFPSDF-PAVPGCDMAGIVVAKGTSVTK 78
           P PTP   Q+LV+V    +    + +  + RP F     P  PG +  G VVA G  V  
Sbjct: 13  PRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRG 72

Query: 79  FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
              GD V G              GA AE+ + +       P  +  +     PL    A+
Sbjct: 73  LAVGDRVAGLSG-----------GAFAEYDLADADHAVPLPSLLDGQAFPGEPLG--CAL 119

Query: 139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADK 197
             F+    + G+T+ ++ GAG +G L +QLA    GA  V+A    P ++   +ELGA +
Sbjct: 120 NVFRRGWIRAGKTVAVI-GAGFIGLLFLQLAA-AAGARRVIAIDRRPARLALARELGATE 177

Query: 198 VID 200
           V+ 
Sbjct: 178 VVT 180

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 62.7 bits (153), Expect = 4e-11
 Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 12/166 (7%)

Query: 7   YEEYG-PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKR-RQRPLFPSDFPAVPGCD 64
           + ++G P +VL++G+ P PTP   ++LV+   + ++  D    R    +  + PA+ G +
Sbjct: 6   HTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSE 65

Query: 65  MAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISF 124
             G+V A G  V     G  V                G  AE+ V     +   P  IS 
Sbjct: 66  AVGVVDAVGEGVKGLQVGQRVAV----------APVHGTWAEYFVAPADGLVPLPDGISD 115

Query: 125 EEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAK 170
           E AA L     +A+      G K GQ +      G VG LV  LA 
Sbjct: 116 EVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAA 161

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 62.9 bits (153), Expect = 4e-11
 Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 38/198 (19%)

Query: 55  SDFPAVPGCDMAGIVVAKGTSVTKFNTGD---------------------EVYGN--IQD 91
           S++P VPG ++ G VV  G+ V+KF  GD                     E Y N  I  
Sbjct: 61  SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWS 120

Query: 92  FNA---EGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIE-----GFKT 143
           +N    +GK  Q G  A  +VV++  + K P+ ++ E+AA L  A  T        G K 
Sbjct: 121 YNDVYTDGKPTQ-GGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQ 179

Query: 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK-VIDYR 202
           +G + G     + G GGVG + +++AK       V++++   + E ++ LGAD  ++   
Sbjct: 180 SGLRGG-----ILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSD 234

Query: 203 KTKYEDIEEKFDVLYDTI 220
             + ++  +  D + DT+
Sbjct: 235 AAEMQEAADSLDYIIDTV 252

Length = 357

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 61.9 bits (151), Expect = 8e-11
 Identities = 58/217 (26%), Positives = 82/217 (37%), Gaps = 41/217 (18%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQ-LLVQVRAAALNPIDSKRRQRPL------FPSDFPAVPG 62
            GP +V ++ + P+P  Q     +V+V AAA+   D       L       PS    V G
Sbjct: 7   KGPGDV-RVEEVPIPQIQDPTDAIVKVTAAAICGSD-------LHIYRGHIPSTPGFVLG 58

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYG---------------------NIQDFNAEGKLKQL 101
            +  G VV  G  V     GD V                           F   G     
Sbjct: 59  HEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLD 118

Query: 102 GALAEFIVV--EESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
           GA AE++ V   +  + K P  +S E A  L   + T   G K A  + G T+ ++ G G
Sbjct: 119 GAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVI-GCG 177

Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGA 195
            VG   +  A+   GA+ V A    P ++E    LGA
Sbjct: 178 PVGLCAVLSAQV-LGAARVFAVDPVPERLERAAALGA 213

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 25/167 (14%)

Query: 55  SDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNI------------QD----------- 91
           + +P VPG ++ GIV   G +V KF  GD V   +            QD           
Sbjct: 64  TRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFT 123

Query: 92  FNAEGK--LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTG 149
           +N+ G    K  G  ++ IVV++  + + P N+  +  A L  A  T     K  G    
Sbjct: 124 YNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEP 183

Query: 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGAD 196
                V G GG+G + +++ K F     V++++S  + E +  LGAD
Sbjct: 184 GKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGAD 230

Length = 360

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 60.6 bits (148), Expect = 2e-10
 Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 26/210 (12%)

Query: 3   NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID------SKRRQRPLFPSD 56
            A   E+       +L +          + V+V  + LN  D           R      
Sbjct: 2   KALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVR-----T 56

Query: 57  FPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIA 116
           FP VPG D+AG VV   +   +F  GD V             +  G  A+   V+   + 
Sbjct: 57  FPLVPGIDLAGTVVESSSP--RFKPGDRVVLTGWGVGE----RHWGGYAQRARVKADWLV 110

Query: 117 KKPKNISFEEAASLPLAVQTA---IEGFKTAGFKTGQ-TIFIVGGAGGVGTL-VIQLAKH 171
             P+ +S  +A ++  A  TA   +   +  G   G   + + G AGGVG++ V  LA+ 
Sbjct: 111 PLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARL 170

Query: 172 FYGASHVVATT-STPKVEFVKELGADKVID 200
            Y    VVA+T    + ++++ LGA ++ID
Sbjct: 171 GY---EVVASTGRPEEADYLRSLGASEIID 197

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 59.6 bits (145), Expect = 5e-10
 Identities = 72/310 (23%), Positives = 113/310 (36%), Gaps = 94/310 (30%)

Query: 67  GIVVAKGTSVTKFNTGDEV------------------------------YGNIQDFNAEG 96
           G+V   G+ V  F  GD V                              + N +D     
Sbjct: 63  GVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD----- 117

Query: 97  KLKQLGALAEFIVVEESL--IAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFI 154
                G  AE+  V ++   +A  P  ++ E+A  LP  + T   G + A  K G T+ +
Sbjct: 118 -----GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAV 172

Query: 155 VGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKF 213
             G G VG + +  A+   GA  ++A  S P  VE  KE GA  ++DY+     D+ E+ 
Sbjct: 173 F-GIGPVGLMAVAGARLR-GAGRIIAVGSRPNRVELAKEYGATDIVDYKNG---DVVEQ- 226

Query: 214 DVLYDTIGDCKNSFVVA----------------------------KDNAPIVDITWPP-- 243
            +L  T G   ++ ++A                             D  PI    W    
Sbjct: 227 -ILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGM 285

Query: 244 SHPRAIYSSLTVSG-EILEKLRPFIESGKLKAQIDPTGP-----YKFKDVIEAFRYLETG 297
            H + I   L   G   +E+L   IE G+    +DP+       + F D+ EA   ++  
Sbjct: 286 GH-KTINGGLCPGGRLRMERLASLIEYGR----VDPSKLLTHHFFGFDDIEEALMLMKD- 339

Query: 298 RARG--KVVI 305
           +     K VI
Sbjct: 340 KPDDLIKPVI 349

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score = 58.8 bits (143), Expect = 7e-10
 Identities = 57/206 (27%), Positives = 86/206 (41%), Gaps = 44/206 (21%)

Query: 136 TAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG 194
           TA  G  +    K G+T+ + G AG VG+LV Q+AK   G   +    S  KV ++KELG
Sbjct: 130 TAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAK-IKGCKVIGCAGSDDKVAWLKELG 188

Query: 195 ADKVIDYRKTKYEDIEEK--------FDVLYDTIG--------DCKNSF-------VVAK 231
            D V +Y KT    +EE          D  +D +G           N F        ++ 
Sbjct: 189 FDAVFNY-KTV--SLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSIST 245

Query: 232 DNAPIVDITWPPSHPRAIYSSLTVSG-----------EILEKLRPFIESGKLKAQIDPT- 279
            N        P      I+  L + G           E L++L  +I+ GKLK +   T 
Sbjct: 246 YNDKEP-KKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTE 304

Query: 280 GPYKFKDVIEAFRYLETGRARGKVVI 305
           G   F+++ +AF  +  G   GK ++
Sbjct: 305 G---FENMPQAFIGMLKGENTGKAIV 327

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 51/149 (34%), Positives = 71/149 (47%), Gaps = 15/149 (10%)

Query: 57  FPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIA 116
           +P +PG D+AG VV       +F  GDEV     D      +   G  +E+  V    + 
Sbjct: 57  YPFIPGIDLAGTVVESNDP--RFKPGDEVIVTSYDLG----VSHHGGYSEYARVPAEWVV 110

Query: 117 KKPKNISFEEAASLPLAVQTA---IEGFKTAGFKTGQTIFIVGGA-GGVGTL-VIQLAKH 171
             PK ++ +EA  L  A  TA   I   +  G    Q   +V GA GGVG+L V  LAK 
Sbjct: 111 PLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKL 170

Query: 172 FYGASHVVATT-STPKVEFVKELGADKVI 199
            Y    VVA+T      +++K+LGA +VI
Sbjct: 171 GY---EVVASTGKADAADYLKKLGAKEVI 196

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 60/222 (27%)

Query: 8   EEYG-PKEV--LKLGDFPLPTPQHDQLLVQVRAAALNPID--------SKRRQRPLFPSD 56
           EEYG P EV  L L +  +P P   ++L++V AA +NP D           +        
Sbjct: 7   EEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKA------- 59

Query: 57  FPAVPGCDMAGIVVAKGTS-VTKFNTGDEV--YGNIQDFNAEGKLKQLGALAEFIVVEES 113
            P  PG + +G VVA G   + +   G  V                  G  AE+ V +  
Sbjct: 60  LPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG-----------SYGTYAEYAVADAQ 108

Query: 114 LIAKKPKNISFEEAASL---PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAK 170
                P  +SFE+ AS    PL   TA+   +TA  +  + +     A  +G ++++L K
Sbjct: 109 QCLPLPDGVSFEQGASSFVNPL---TALGMLETAREEGAKAVVHTAAASALGRMLVRLCK 165

Query: 171 H-------------------FYGASHVVATTSTPKVEFVKEL 193
                                 GA +V+ ++     +F+++L
Sbjct: 166 ADGIKVINIVRRKEQVDLLKKIGAEYVLNSSD---PDFLEDL 204

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 38/234 (16%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSK-RRQRPLFPSD--------FPAV 60
           +GP++  +L + P+P P   ++LV+V A  +   D K     P F  D         P +
Sbjct: 7   HGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMI 65

Query: 61  PGCDMAGIVVAKGTSVTK--FNTGDEV------------------YGNIQDFNAEG-KLK 99
           PG +  G VV  G    +     GD V                  Y   Q  +  G +  
Sbjct: 66  PGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNN 125

Query: 100 QLGALAEFIVV-EESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGG 157
             G +AE++   +E+++ K P +I  E+A  + PLA   A+     A  K    + ++ G
Sbjct: 126 VNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPLAC--ALHAVDRANIKFDDVV-VLAG 182

Query: 158 AGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE 211
           AG +G  +I  A+       +V      ++   ++ GAD V++    + + +E+
Sbjct: 183 AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLN--PPEVDVVEK 234

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 30/233 (12%)

Query: 13  KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDF----PAVPGCDMAGI 68
              LK+  F LP      + V+++A  +   D     + +  +DF    P V G + AGI
Sbjct: 26  VNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDV-HYLKTMRCADFVVKEPMVIGHECAGI 84

Query: 69  VVAKGTSVTKFNTGDEV------------------YGNIQDFNAEGKLKQLGALAEFIVV 110
           +   G+ V     GD V                  Y    +          G+LA  +V 
Sbjct: 85  IEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVH 144

Query: 111 EESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLA 169
              L  K P+N+S EE A   PL+V   +   + A       + ++G AG +G LV  LA
Sbjct: 145 PADLCFKLPENVSLEEGAMCEPLSV--GVHACRRANIGPETNVLVMG-AGPIG-LVTMLA 200

Query: 170 KHFYGASHVV-ATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221
              +GA  +V       ++   K+LGAD+++    T  ED+E + + +   +G
Sbjct: 201 ARAFGAPRIVIVDVDDERLSVAKQLGADEIVLV-STNIEDVESEVEEIQKAMG 252

Length = 364

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 50/235 (21%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSD----FPAVPGCDM 65
           +   + LK+ +  +  PQ  ++LV++ A  +   D+      L  +D    FP + G + 
Sbjct: 8   WAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDA----FTLSGADPEGVFPVILGHEG 63

Query: 66  AGIVVAKGTSVTKFNTGDEVY------------------------------GNIQD---- 91
           AGIV A G  VT    GD V                               G + D    
Sbjct: 64  AGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSR 123

Query: 92  FNAEGKL--KQLG--ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG-FKTAGF 146
           F+ +G+     +G    +E+ VV E  +AK       EE   L   V T I     TA  
Sbjct: 124 FSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKV 183

Query: 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVID 200
           + G T+ + G  GG+G  VIQ A+    AS ++A    P K E  K+LGA   ++
Sbjct: 184 EEGDTVAVFG-LGGIGLSVIQGAR-MAKASRIIAIDINPAKFELAKKLGATDCVN 236

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 56/210 (26%), Positives = 84/210 (40%), Gaps = 25/210 (11%)

Query: 16  LKLGDFPLPTPQHDQLLVQVRA---------AALNPIDSKRRQRPLFPSDFPA--VPGCD 64
           L + D P P P   Q+LV+V A         A  +P             D  A  V G +
Sbjct: 11  LVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHE 70

Query: 65  MAGIVVAKGTSV-TKFNTGDEVYGN---IQDFNAEGKLKQ----LGALAEFIVVEESLIA 116
             G VV  G     K   G  V      +    A   +       G  AE++++ E+L+ 
Sbjct: 71  FCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLL 130

Query: 117 KKPKNISFEEAA-SLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA 175
           + P  +S E+AA + PLAV   +   + A    G+   +V G G +G  VI   K   G 
Sbjct: 131 RVPDGLSMEDAALTEPLAV--GLHAVRRARLTPGEVA-LVIGCGPIGLAVIAALK-ARGV 186

Query: 176 SHVVATTSTP-KVEFVKELGADKVIDYRKT 204
             +VA+  +P +      +GAD V+D    
Sbjct: 187 GPIVASDFSPERRALALAMGADIVVDPAAD 216

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 51.9 bits (124), Expect = 1e-07
 Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 31/195 (15%)

Query: 55  SDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNI------------QDF---------- 92
           S +P +PG ++ GI    G +VTKF  GD V   +            QD           
Sbjct: 58  SRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFT 117

Query: 93  ----NAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGF-- 146
               +++G   Q G  ++ IVV+   +   P  +  +  A L  A  T     K  G   
Sbjct: 118 YNSRSSDGTRNQ-GGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTK 176

Query: 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK-VIDYRKTK 205
           ++G+ +  V G GG+G + +++ K F     V++ +S  + E +  LGAD  ++     K
Sbjct: 177 ESGKRLG-VNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQK 235

Query: 206 YEDIEEKFDVLYDTI 220
            ++     D + DT+
Sbjct: 236 MKEAVGTMDFIIDTV 250

Length = 375

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 4e-07
 Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 42/226 (18%)

Query: 102 GALAEFIVVEESLIAKKPKNISFEEAA-SLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGG 160
           G    + VV+ +     P+    +  A + PLAV  AI     AG   G+ +F V G G 
Sbjct: 124 GGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAV--AIHAAHQAGDLQGKRVF-VSGVGP 180

Query: 161 VGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYED-IEEK--FDVL 216
           +G L++   K   GA+ +V    +P+ +   +E+GADK+++ +    +    EK  FDV 
Sbjct: 181 IGCLIVAAVKTL-GAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVS 239

Query: 217 YDTIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVS---GEILE-----KLRPFIE 268
           ++  G                       HP +I + L V+   G +++         F  
Sbjct: 240 FEVSG-----------------------HPSSINTCLEVTRAKGVMVQVGMGGAPPEFPM 276

Query: 269 SGKLKAQIDPTGPYKFKD-VIEAFRYLETGRARGKVVISA-FPYTE 312
              +  +I   G ++F +    A  +L  G      ++SA +P+T+
Sbjct: 277 MTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPLLSAEYPFTD 322

Length = 343

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 17/106 (16%)

Query: 29  DQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGN 88
            ++LV+V+AA +   D    +    P   P + G + AGIV   G  VT    GD V   
Sbjct: 2   GEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVY 61

Query: 89  IQ------DFNAEGK-----------LKQLGALAEFIVVEESLIAK 117
                       EG+           +   G  AE++VV    +  
Sbjct: 62  PLIPCGKCAACREGRENLCPNGKFLGVHLDGGFAEYVVVPARNLVP 107

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 49.6 bits (119), Expect = 8e-07
 Identities = 55/247 (22%), Positives = 88/247 (35%), Gaps = 48/247 (19%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAV 60
           M+             L++ D P P P   + LV+V  A +   D     +  +P  FP V
Sbjct: 1   MKALVLDG----GLDLRVEDLPKPEPPPGEALVRVLLAGICNTD-LEIYKGYYP--FPGV 53

Query: 61  PGCDMAGIVVAKGTS-------VTKFNTGD-----------------EVYGNIQDFNAEG 96
           PG +  GIV     +       V + N                     V G I D +   
Sbjct: 54  PGHEFVGIVEEGPEAELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLG-IVDRD--- 109

Query: 97  KLKQLGALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIV 155
                GA AE++ +    +   P  +  E+A    PLA   A+E  +      G  + ++
Sbjct: 110 -----GAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLA--AALEILEQVPITPGDKVAVL 162

Query: 156 GGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDV 215
            G G +G L+ Q      G   V+    + K+   + LG + V+       E     FDV
Sbjct: 163 -GDGKLGLLIAQ-VLALTGPDVVLVGRHSEKLALARRLGVETVLPDEA---ESEGGGFDV 217

Query: 216 LYDTIGD 222
           + +  G 
Sbjct: 218 VVEATGS 224

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 65/246 (26%), Positives = 95/246 (38%), Gaps = 51/246 (20%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
             P     L D  L  P+ D++LV++ A  +   D   R   L P+  PAV G + AG+V
Sbjct: 9   REPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGL-PTPLPAVLGHEGAGVV 67

Query: 70  VAKGTSVTKFNTGDEV-------------------Y-GNIQDFNAEGK-------LKQLG 102
            A G++VT    GD V                   Y  N    N  G+       L    
Sbjct: 68  EAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDD 127

Query: 103 A------------LAEFIVVEESLIAKKPKNISFEEAASLPLAVQT---AIEGFKTAGFK 147
                         A + VV E  + K  K++  E  A L   +QT   A+        +
Sbjct: 128 GTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAV--LNVLKPR 185

Query: 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKY 206
            G +I +  GAG VG   + +A    G + ++A      ++E  KELGA  VI+    K 
Sbjct: 186 PGSSIAVF-GAGAVGLAAV-MAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN---PKE 240

Query: 207 EDIEEK 212
           ED+   
Sbjct: 241 EDLVAA 246

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 36/186 (19%)

Query: 67  GIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLK---------------QLGAL-----AE 106
           G+V   G++VT F  GD V   I   ++ G                   LG L     AE
Sbjct: 64  GVVEEVGSAVTNFKVGDRVL--ISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAE 121

Query: 107 FIVV---EESLIAKKPKNISFEEAASLPLAVQTAIE-GFKTAGFKTGQTIFIVGGAGGVG 162
           ++ +   + SL  K P+ +  E A  L   + T  E G      K G T+ IVG AG VG
Sbjct: 122 YVRIPHADNSLY-KLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVG-AGPVG 179

Query: 163 TLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDI------EEKFDV 215
              +  A+  Y  S ++       ++E  K+LGA   ++  K    +           DV
Sbjct: 180 LAALLTAQ-LYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRGVDV 238

Query: 216 LYDTIG 221
           + + +G
Sbjct: 239 VIEAVG 244

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           VV+E+ +A     +  E  + +  AV T  +    AG K G  + IV GAGGVG  ++Q 
Sbjct: 129 VVDEARLAAA--GLPLEHVSVVADAVTTPYQAAVQAGLKKGDLV-IVIGAGGVGGYMVQT 185

Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKF 213
           AK   GA+ V       K+E +K  GAD  ++ +     ++++  
Sbjct: 186 AKAM-GAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLI 229

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 41/191 (21%), Positives = 65/191 (34%), Gaps = 46/191 (24%)

Query: 67  GIVVAKGTSVTKFNTGDEV------------------YGNIQDFNAEGKLKQL------- 101
           G+V   G  V     GD V                  Y    + N   ++ +L       
Sbjct: 64  GVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAG 123

Query: 102 ------------GALAEFIVV---EESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGF 146
                       G  AE++ V   +     K P ++S E+A  L   + T     + A  
Sbjct: 124 IFGYSHLTGGYAGGQAEYVRVPFADVGPF-KIPDDLSDEKALFLSDILPTGYHAAELAEV 182

Query: 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTK 205
           K G T+  V G G VG    + AK   GA  V+A    P ++E  +     + I++ +  
Sbjct: 183 KPGDTV-AVWGCGPVGLFAARSAKLL-GAERVIAIDRVPERLEMARSHLGAETINFEEVD 240

Query: 206 --YEDIEEKFD 214
              E + E   
Sbjct: 241 DVVEALRELTG 251

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 58/240 (24%), Positives = 88/240 (36%), Gaps = 38/240 (15%)

Query: 14  EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKG 73
             ++L    +P P   +++V ++A  +   D   R+  +   +FP + G + AG+V A G
Sbjct: 12  APVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGI-NDEFPFLLGHEAAGVVEAVG 70

Query: 74  TSVTKFNTGDEVYGN-------------------IQDFNAEGKLK-----------QLGA 103
             VT    GD V  N                       NA  K+             +GA
Sbjct: 71  EGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGA 130

Query: 104 LAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVGGAGGVG 162
            AE  +V      K         A  L   V   +     T G K G ++ ++ G GGVG
Sbjct: 131 FAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVI-GCGGVG 189

Query: 163 TLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221
              I  A    GAS ++A      K+E+ +E GA   ++   T   D  E    L    G
Sbjct: 190 DAAIAGAA-LAGASKIIAVDIDDRKLEWAREFGATHTVNSSGT---DPVEAIRALTGGFG 245

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 11/85 (12%)

Query: 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKT 204
           G K G+T+ +   AG VG++V Q+AK   G   V A  S  KV ++K+LG D   +Y+  
Sbjct: 135 GVKGGETVMVNAAAGAVGSVVGQIAK-LKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTV 193

Query: 205 KYEDIEEK--------FDVLYDTIG 221
           K   +EE         +D  +D +G
Sbjct: 194 K--SLEETLKKASPDGYDCYFDNVG 216

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 53/236 (22%), Positives = 88/236 (37%), Gaps = 48/236 (20%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +   + L + +  +  P+ +++ +++ A ++   D    +     + FP + G + AGIV
Sbjct: 9   WEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIE-GFKATLFPVILGHEGAGIV 67

Query: 70  VAKGTSVTKFNTGDEVY-----------------------------GNIQD----FNAEG 96
            + G  VT    GD+V                              G + D    F  +G
Sbjct: 68  ESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKG 127

Query: 97  KLKQL----GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF----KTAGFKT 148
           K           +++ VV+E+ +AK       E    L     T   G+     TA  + 
Sbjct: 128 KKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFST---GYGAAWNTAKVEP 184

Query: 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRK 203
           G T+  V G G VG   I  AK   GAS ++       K E  KE GA   I+ + 
Sbjct: 185 GSTV-AVFGLGAVGLSAIMGAK-IAGASRIIGVDINEDKFEKAKEFGATDFINPKD 238

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 44.4 bits (105), Expect = 5e-05
 Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 38/218 (17%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKR----RQRPLFPSDF---PAVPG 62
           YG K  L+L  F LP    D++LV+V + +L     K           P+D    P + G
Sbjct: 9   YG-KGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILG 67

Query: 63  CDMAGIVVAKGTSVT-KFNTGDE--VYGNIQDFNAEGK----LKQLGALAEFIVVEESLI 115
            + AG ++  G     K+  G    +   +   +            G LA + ++   ++
Sbjct: 68  HEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVM 127

Query: 116 AK----KPKNISFEEAASL-PLAVQTAIEGFKTA-------------GFKTGQTIFIVGG 157
            +      +   + EA+ + PL+    + G  TA             G K G    I+GG
Sbjct: 128 EQDCLLIYEGDGYAEASLVEPLS---CVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGG 184

Query: 158 AGGVGTLVIQLAKHF-YGASHVVAT-TSTPKVEFVKEL 193
           AG +G + I  A H   G S +V T  +  ++   + L
Sbjct: 185 AGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRL 222

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 56/235 (23%), Positives = 88/235 (37%), Gaps = 50/235 (21%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSD----FPAVPGCDM 65
           +   + L + +  +  P+  ++ +++ A  +   D+      L  +D    FP + G + 
Sbjct: 9   WEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDA----YTLSGADPEGLFPVILGHEG 64

Query: 66  AGIVVAKGTSVTKFNTGDEV---Y------------------GNIQDFNAEG-------- 96
           AGIV + G  VT    GD V   Y                    I+    +G        
Sbjct: 65  AGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSR 124

Query: 97  ---KLKQL------GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG-FKTAGF 146
              K K +         +E+ VV E  +AK       ++   L   V T       TA  
Sbjct: 125 FSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKV 184

Query: 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVID 200
           + G T+  V G G VG  VIQ AK   GAS ++     P K E  K+ GA   ++
Sbjct: 185 EPGSTV-AVFGLGAVGLAVIQGAKA-AGASRIIGIDINPDKFELAKKFGATDCVN 237

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 37/213 (17%)

Query: 62  GCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKN 121
             D  G+ V + +   KF  GD V      FN   +   +   +    V+  L+      
Sbjct: 73  VLDGGGVGVVEESKHQKFAVGDIVTS----FNWPWQTYAVLDGSSLEKVDPQLVDGHLS- 127

Query: 122 ISFEEAASLPLAVQTAIEGFKTAGFKT---GQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
             F  A  LP    TA+ G +  G  T    QT+ + G AG  G+L  Q+     G S V
Sbjct: 128 -YFLGAVGLP--GLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIG-RLLGCSRV 183

Query: 179 VATT-STPKVEF-VKELGADKVIDYRKTKYEDIEEKF--------DVLYDTI-GDCKNSF 227
           V    S  K +    ELG D  I+Y+    +++ E+         DV +D + G+  ++ 
Sbjct: 184 VGICGSDEKCQLLKSELGFDAAINYKT---DNVAERLRELCPEGVDVYFDNVGGEISDTV 240

Query: 228 VVA-KDNAPIV----------DITWPPSHPRAI 249
           +    +N+ I+          D+ +PP  P A 
Sbjct: 241 ISQMNENSHIILCGQISQYNKDVPYPPPLPEAT 273

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 41/185 (22%)

Query: 58  PAVPGCDMAGIVVAK--GTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEE-SL 114
           P VPG  + G  V+K   +    F  GD + G                       EE SL
Sbjct: 73  PFVPGQRIEGFGVSKVVDSDDPNFKPGDLISG-------------------ITGWEEYSL 113

Query: 115 IAKKPKNI-SFEEAASLPLAVQTAIEGF----KTAGF------KTGQTIFIVGGAGGVGT 163
           I      +   +    +PL+    + G       AGF      K G ++F+   +G VG 
Sbjct: 114 IRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQ 173

Query: 164 LVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKTKYED------IEEKFDVL 216
           LV QLAK  +G   V +  S+ KV+ +K +LG D+  +Y++    D        E  D+ 
Sbjct: 174 LVGQLAK-LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIY 232

Query: 217 YDTIG 221
           +D +G
Sbjct: 233 FDNVG 237

Length = 348

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 53/217 (24%), Positives = 86/217 (39%), Gaps = 36/217 (16%)

Query: 22  PLPTPQHDQLLVQVRAAALNPIDSK--RRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKF 79
           P+P P   ++ V+V+ A +   DS   R   P   + +P V G +  G++ A G  V   
Sbjct: 18  PIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF--AKYPRVIGHEFFGVIDAVGEGVDAA 75

Query: 80  NTGDEVYGN------------IQDFNAEGKLKQLG-----ALAEFIVVEESLIAKKPKNI 122
             G+ V  +            I   N    L  LG       +E+ VV      + P  I
Sbjct: 76  RIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAI 135

Query: 123 SFEEAASLPLAVQTAIEGFKTAGFKTGQT------IFIVGGAGGVGTLVIQLAKHFYGAS 176
           + + A          +E F  A   TG+T      + ++ GAG VG  ++Q+ K  Y   
Sbjct: 136 ADQYAV--------MVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVK 187

Query: 177 HVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK 212
            V+       ++   KE GAD VI+  +    +  E+
Sbjct: 188 AVIVADRIDERLALAKESGADWVINNAQEPLGEALEE 224

Length = 339

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 77/306 (25%), Positives = 115/306 (37%), Gaps = 73/306 (23%)

Query: 46  KRRQRPLFPSDFPAVPGCDMAGIVVAK--GTSVTKFNTGDEVYGNIQDFNAEGKLKQLGA 103
           K     L+   F   PG  + G  VAK   +    F  GD V+G                
Sbjct: 58  KGHDDSLYLPPF--KPGEVITGYGVAKVVDSGNPDFKVGDLVWGFTG------------- 102

Query: 104 LAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK--TA--GF------KTGQTIF 153
                  EE  +  + +++   +   +PL+    + G    TA  GF      K G+T+F
Sbjct: 103 ------WEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVF 156

Query: 154 IVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVIDYRK--------T 204
           +   +G VG LV QLAK   G   V +  S  KV+ +K  LG D   +Y++         
Sbjct: 157 VSAASGAVGQLVGQLAK-LKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALK 215

Query: 205 KYEDIEEKFDVLYDTIGDCKNSFVVAKDN--APIV--------DITWP---PSHPRAIYS 251
           +Y       D+ +D +G      V+   N    I         ++ WP    +    IY 
Sbjct: 216 RY--FPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYK 273

Query: 252 SLTVSG-----------EILEKLRPFIESGKLKAQIDPT-GPYKFKDVIEAFRYLETGRA 299
            + + G           E LE++  +I+ GKLK   D   G        EAF  L TG  
Sbjct: 274 RVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESA---PEAFVGLFTGSN 330

Query: 300 RGKVVI 305
            GK V+
Sbjct: 331 IGKQVV 336

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 54/218 (24%), Positives = 84/218 (38%), Gaps = 22/218 (10%)

Query: 11  GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSK---RRQRPLFPS-DFPAVPGCDMA 66
           GP + ++L +  L  P    L+V++  + ++    K       P FP   +P VPG +  
Sbjct: 9   GPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESV 67

Query: 67  GIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-GALAEFIVVE-ESLIAKKPKNISF 124
           G VV  G   T F  GD V+  +   N    ++ L G  ++ +V     +    P     
Sbjct: 68  GRVVEAGPD-TGFRPGDRVF--VPGSNCYEDVRGLFGGASKRLVTPASRVCRLDP--ALG 122

Query: 125 EEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184
            + A L LA  TA                IV G G +G L+ +L K   G S      + 
Sbjct: 123 PQGALLALAA-TARHAV-AGAEVKVLPDLIV-GHGTLGRLLARLTKAA-GGSPPAVWETN 178

Query: 185 PKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD 222
           P+          +V+D  K    D    +  +YD  GD
Sbjct: 179 PRRRDGAT--GYEVLDPEK----DPRRDYRAIYDASGD 210

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 55/246 (22%), Positives = 96/246 (39%), Gaps = 41/246 (16%)

Query: 12  PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID----SKRRQRPLFPSDFPAVPGCDMAG 67
            K  +++ D P P P   ++LV+     +   D    +          DF  V G +  G
Sbjct: 9   GKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDF-LVLGHEALG 67

Query: 68  IVVAKGTSVTKFNTGDEVYGNI--------------QDFNAEGK-----LKQL-GALAEF 107
           +V   G   +  + GD V   +               DF   G+     +K L G + E+
Sbjct: 68  VVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREY 126

Query: 108 IVVEESLIAKKPKNISFEEAASL--PLA-VQTAIEGFKTAG--FKT--GQTIFIVGGAGG 160
            V +   + K P ++   +   L  PL+ V+ AIE  +       T   +   ++G AG 
Sbjct: 127 FVDDPEYLVKVPPSL--ADVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLG-AGP 183

Query: 161 VGTLVIQLAKHFYGASHVVATTSTP--KVEFVKELGADKVIDYRKT--KYEDIEEKFDVL 216
           +G L   L +      +V+     P  K + V+ELGA   ++  KT      +  +FD++
Sbjct: 184 IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGA-TYVNSSKTPVAEVKLVGEFDLI 242

Query: 217 YDTIGD 222
            +  G 
Sbjct: 243 IEATGV 248

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	327
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.98
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.98
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.97
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.96
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.95
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.94
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.94
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.94
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.75
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.33
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.22
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.15
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	98.98
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.21
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.14
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.0
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.95
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	97.9
PLN02494	477	adenosylhomocysteinase	97.8
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.59
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.52
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.52
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.36
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.32
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.2
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.14
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.13
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.12
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.08
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.02
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.02
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.78
PRK08324	681	short chain dehydrogenase; Validated	96.72
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.69
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.59
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.56
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.5
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	96.48
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.38
PLN03209	576	translocon at the inner envelope of chloroplast su	96.29
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	96.28
PRK05693	274	short chain dehydrogenase; Provisional	96.22
PRK05993	277	short chain dehydrogenase; Provisional	96.18
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.17
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.08
PRK06182	273	short chain dehydrogenase; Validated	96.05
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	96.04
PRK07060	245	short chain dehydrogenase; Provisional	95.98
PRK14967	223	putative methyltransferase; Provisional	95.96
PRK06139	330	short chain dehydrogenase; Provisional	95.93
PRK12367	245	short chain dehydrogenase; Provisional	95.93
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	95.88
CHL00194	317	ycf39 Ycf39; Provisional	95.83
PRK06057	255	short chain dehydrogenase; Provisional	95.82
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	95.81
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	95.8
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	95.78
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	95.76
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.7
PRK05872	296	short chain dehydrogenase; Provisional	95.69
PRK08177	225	short chain dehydrogenase; Provisional	95.6
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.55
PRK06949	258	short chain dehydrogenase; Provisional	95.54
PRK07825	273	short chain dehydrogenase; Provisional	95.53
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.53
PRK07831	262	short chain dehydrogenase; Provisional	95.52
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	95.48
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.48
PRK12742	237	oxidoreductase; Provisional	95.48
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	95.44
PRK04148	134	hypothetical protein; Provisional	95.39
PRK06196	315	oxidoreductase; Provisional	95.38
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.33
PRK07814	263	short chain dehydrogenase; Provisional	95.3
PRK05866	293	short chain dehydrogenase; Provisional	95.26
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.25
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.25
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.19
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.14
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.12
PRK06841	255	short chain dehydrogenase; Provisional	95.11
PRK05867	253	short chain dehydrogenase; Provisional	94.94
PRK06180	277	short chain dehydrogenase; Provisional	94.94
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.93
PRK07109	334	short chain dehydrogenase; Provisional	94.93
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	94.91
PRK07677	252	short chain dehydrogenase; Provisional	94.9
PRK12829	264	short chain dehydrogenase; Provisional	94.89
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	94.89
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	94.88
PLN03139	386	formate dehydrogenase; Provisional	94.88
PRK08265	261	short chain dehydrogenase; Provisional	94.85
PRK07574	385	formate dehydrogenase; Provisional	94.84
PRK09291	257	short chain dehydrogenase; Provisional	94.83
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.83
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.82
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	94.81
PRK06500	249	short chain dehydrogenase; Provisional	94.81
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	94.8
PRK05854	313	short chain dehydrogenase; Provisional	94.79
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.79
PRK07478	254	short chain dehydrogenase; Provisional	94.77
PRK08017	256	oxidoreductase; Provisional	94.77
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.75
PRK12828	239	short chain dehydrogenase; Provisional	94.73
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.73
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	94.7
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.67
PRK09072	263	short chain dehydrogenase; Provisional	94.65
PRK07904	253	short chain dehydrogenase; Provisional	94.64
PRK07326	237	short chain dehydrogenase; Provisional	94.62
PRK08628	258	short chain dehydrogenase; Provisional	94.62
PRK06194	287	hypothetical protein; Provisional	94.61
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	94.6
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.59
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	94.56
PRK07890	258	short chain dehydrogenase; Provisional	94.5
PRK08589	272	short chain dehydrogenase; Validated	94.5
PRK05876	275	short chain dehydrogenase; Provisional	94.47
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.43
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	94.42
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.42
KOG0725	270	consensus Reductases with broad range of substrate	94.4
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.4
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	94.38
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.37
KOG1252	362	consensus Cystathionine beta-synthase and related	94.32
PRK12939	250	short chain dehydrogenase; Provisional	94.31
PRK06114	254	short chain dehydrogenase; Provisional	94.3
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	94.29
PRK08862	227	short chain dehydrogenase; Provisional	94.26
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.25
PRK08340	259	glucose-1-dehydrogenase; Provisional	94.24
PRK08213	259	gluconate 5-dehydrogenase; Provisional	94.23
PLN02928	347	oxidoreductase family protein	94.22
PRK05717	255	oxidoreductase; Validated	94.21
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.21
PRK06483	236	dihydromonapterin reductase; Provisional	94.21
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	94.18
PRK08264	238	short chain dehydrogenase; Validated	94.14
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	94.14
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	94.13
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	94.13
PRK07454	241	short chain dehydrogenase; Provisional	94.07
PRK06125	259	short chain dehydrogenase; Provisional	94.04
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	94.04
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.01
PRK07774	250	short chain dehydrogenase; Provisional	94.0
PRK08643	256	acetoin reductase; Validated	93.97
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	93.97
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	93.96
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	93.94
PRK08277	278	D-mannonate oxidoreductase; Provisional	93.94
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	93.93
PRK06914	280	short chain dehydrogenase; Provisional	93.92
PRK06179	270	short chain dehydrogenase; Provisional	93.91
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	93.91
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	93.89
PRK06720	169	hypothetical protein; Provisional	93.89
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	93.88
PRK05875	276	short chain dehydrogenase; Provisional	93.84
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.84
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	93.84
PRK07024	257	short chain dehydrogenase; Provisional	93.82
PRK08226	263	short chain dehydrogenase; Provisional	93.81
PRK06484	520	short chain dehydrogenase; Validated	93.81
PRK13243	333	glyoxylate reductase; Reviewed	93.8
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.78
PRK06198	260	short chain dehydrogenase; Provisional	93.78
PLN02253	280	xanthoxin dehydrogenase	93.75
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	93.73
PRK06181	263	short chain dehydrogenase; Provisional	93.71
PRK07832	272	short chain dehydrogenase; Provisional	93.7
PRK08251	248	short chain dehydrogenase; Provisional	93.68
PRK08618	325	ornithine cyclodeaminase; Validated	93.65
PRK07856	252	short chain dehydrogenase; Provisional	93.64
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	93.64
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	93.63
PRK08339	263	short chain dehydrogenase; Provisional	93.61
PRK08317	241	hypothetical protein; Provisional	93.61
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	93.59
PRK08263	275	short chain dehydrogenase; Provisional	93.56
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	93.54
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	93.54
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.54
PRK06128	300	oxidoreductase; Provisional	93.49
PRK06482	276	short chain dehydrogenase; Provisional	93.49
PRK08267	260	short chain dehydrogenase; Provisional	93.48
PLN02780	320	ketoreductase/ oxidoreductase	93.47
COG2910	211	Putative NADH-flavin reductase [General function p	93.47
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	93.46
PRK08303	305	short chain dehydrogenase; Provisional	93.45
PRK05884	223	short chain dehydrogenase; Provisional	93.43
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	93.41
PRK06398	258	aldose dehydrogenase; Validated	93.4
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.36
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.35
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	93.35
PRK10538	248	malonic semialdehyde reductase; Provisional	93.34
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.33
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	93.33
PRK06484	520	short chain dehydrogenase; Validated	93.32
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.3
PRK08278	273	short chain dehydrogenase; Provisional	93.27
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.24
PRK07806	248	short chain dehydrogenase; Provisional	93.23
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	93.22
PRK07074	257	short chain dehydrogenase; Provisional	93.2
PLN02427	386	UDP-apiose/xylose synthase	93.2
PRK06953	222	short chain dehydrogenase; Provisional	93.19
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	93.19
PRK06138	252	short chain dehydrogenase; Provisional	93.18
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.11
PLN02686	367	cinnamoyl-CoA reductase	93.11
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.07
PRK12743	256	oxidoreductase; Provisional	93.07
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.07
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	93.06
PRK07791	286	short chain dehydrogenase; Provisional	93.05
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	93.01
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	92.99
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	92.98
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	92.98
PLN02695	370	GDP-D-mannose-3',5'-epimerase	92.92
PRK07576	264	short chain dehydrogenase; Provisional	92.91
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	92.91
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	92.9
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	92.87
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	92.85
PRK07523	255	gluconate 5-dehydrogenase; Provisional	92.85
PRK07063	260	short chain dehydrogenase; Provisional	92.84
PRK07775	274	short chain dehydrogenase; Provisional	92.83
PRK08703	239	short chain dehydrogenase; Provisional	92.82
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	92.82
PRK07062	265	short chain dehydrogenase; Provisional	92.8
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	92.78
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	92.78
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	92.76
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.72
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.72
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	92.69
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	92.69
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.67
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	92.67
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.66
PRK13403	335	ketol-acid reductoisomerase; Provisional	92.59
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	92.5
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.49
PLN02214	342	cinnamoyl-CoA reductase	92.47
PRK07035	252	short chain dehydrogenase; Provisional	92.47
PRK09186	256	flagellin modification protein A; Provisional	92.47
PLN00198	338	anthocyanidin reductase; Provisional	92.46
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	92.46
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.46
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	92.45
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	92.37
PRK14982	340	acyl-ACP reductase; Provisional	92.35
PRK07453	322	protochlorophyllide oxidoreductase; Validated	92.32
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	92.31
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.31
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.27
PRK06172	253	short chain dehydrogenase; Provisional	92.26
PRK06197	306	short chain dehydrogenase; Provisional	92.26
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	92.26
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	92.25
PRK06932	314	glycerate dehydrogenase; Provisional	92.24
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	92.24
PLN03075	296	nicotianamine synthase; Provisional	92.17
PRK08085	254	gluconate 5-dehydrogenase; Provisional	92.14
PRK12938	246	acetyacetyl-CoA reductase; Provisional	92.11
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	92.11
PLN02896	353	cinnamyl-alcohol dehydrogenase	92.09
PRK12548	289	shikimate 5-dehydrogenase; Provisional	92.08
PLN02650	351	dihydroflavonol-4-reductase	92.06
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	92.04
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	92.03
PRK05650	270	short chain dehydrogenase; Provisional	92.02
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.99
PRK06101	240	short chain dehydrogenase; Provisional	91.99
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	91.97
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	91.96
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	91.92
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	91.91
PRK07340	304	ornithine cyclodeaminase; Validated	91.9
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	91.85
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	91.84
PRK07067	257	sorbitol dehydrogenase; Provisional	91.81
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.78
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.77
PRK12480	330	D-lactate dehydrogenase; Provisional	91.77
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.77
PRK06701	290	short chain dehydrogenase; Provisional	91.75
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	91.73
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	91.69
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	91.69
PRK12937	245	short chain dehydrogenase; Provisional	91.66
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	91.65
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	91.64
PRK06124	256	gluconate 5-dehydrogenase; Provisional	91.56
PRK03562	621	glutathione-regulated potassium-efflux system prot	91.54
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	91.47
PRK10258	251	biotin biosynthesis protein BioC; Provisional	91.45
PRK08655	437	prephenate dehydrogenase; Provisional	91.43
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.43
PRK09242	257	tropinone reductase; Provisional	91.42
PLN00203	519	glutamyl-tRNA reductase	91.42
PRK06436	303	glycerate dehydrogenase; Provisional	91.41
COG4122	219	Predicted O-methyltransferase [General function pr	91.41
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	91.37
PRK10669	558	putative cation:proton antiport protein; Provision	91.35
PRK06487	317	glycerate dehydrogenase; Provisional	91.35
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	91.32
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	91.32
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	91.3
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	91.26
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	91.25
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	91.24
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	91.22
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	91.18
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	91.13
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.09
PRK03659	601	glutathione-regulated potassium-efflux system prot	91.07
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	91.06
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.03
PRK05599	246	hypothetical protein; Provisional	91.03
PRK08219	227	short chain dehydrogenase; Provisional	91.01
PRK05855	582	short chain dehydrogenase; Validated	90.99
PLN02206	442	UDP-glucuronate decarboxylase	90.97
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.92
COG0499	420	SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me	90.88
PLN02166	436	dTDP-glucose 4,6-dehydratase	90.83
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	90.81
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	90.8
KOG1208	314	consensus Dehydrogenases with different specificit	90.78
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	90.7
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	90.68
PRK07985	294	oxidoreductase; Provisional	90.66
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	90.58
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.58
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.57
PRK06719	157	precorrin-2 dehydrogenase; Validated	90.56
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	90.54
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	90.47
PLN03013	429	cysteine synthase	90.43
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	90.41
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	90.36
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	90.29
PRK06141	314	ornithine cyclodeaminase; Validated	90.24
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	90.24
PRK07097	265	gluconate 5-dehydrogenase; Provisional	90.23
COG0144	355	Sun tRNA and rRNA cytosine-C5-methylases [Translat	90.21
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	90.19
PRK12935	247	acetoacetyl-CoA reductase; Provisional	90.11
PRK07102	243	short chain dehydrogenase; Provisional	90.1
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.02
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	90.02
PLN02233	261	ubiquinone biosynthesis methyltransferase	89.98
PRK06523	260	short chain dehydrogenase; Provisional	89.97
PRK12746	254	short chain dehydrogenase; Provisional	89.95
PRK07023	243	short chain dehydrogenase; Provisional	89.87
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	89.85
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	89.83
PLN02306	386	hydroxypyruvate reductase	89.82
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	89.82
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	89.81
PRK09134	258	short chain dehydrogenase; Provisional	89.79
PRK07201	657	short chain dehydrogenase; Provisional	89.75
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	89.58
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	89.58
PRK07417	279	arogenate dehydrogenase; Reviewed	89.57
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	89.53
PLN02583	297	cinnamoyl-CoA reductase	89.51
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	89.49
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	89.36
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	89.34
COG3268	382	Uncharacterized conserved protein [Function unknow	89.33
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	89.29
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.29
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	89.21
PRK11761	296	cysM cysteine synthase B; Provisional	89.15
PRK12814	652	putative NADPH-dependent glutamate synthase small	89.12
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	89.06

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=3.3e-55  Score=380.99  Aligned_cols=302  Identities=29%  Similarity=0.443  Sum_probs=269.0

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++.+++++  +++.+++.|.|+++||+|+|+|+|+|+||+|.++|.++...+|+++|||.+|+|+++|++|+.++
T Consensus         3 ~mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           3 TMKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             ceEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            7999999999987  99999999999999999999999999999999999999888999999999999999999999999


Q ss_pred             CCCEEEE-e------------cccccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH
Q 020320           81 TGDEVYG-N------------IQDFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK  142 (327)
Q Consensus        81 ~Gd~V~~-~------------~~~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~  142 (327)
                      +||||.. +            .+..+.|.     +.+.+|+|+||+++++.+++++|+++++..||.+.++..|.|++++
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk  160 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALK  160 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehh
Confidence            9999965 2            12334442     4568999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhcc-CccEEEeCCC
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE-KFDVLYDTIG  221 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~d~v~d~~g  221 (327)
                      ..+++||++|+|+| .|++|++++|+||++ |+++++.++++++++.++++|++++++.++.+...... .+|+++++++
T Consensus       161 ~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~-ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~  238 (339)
T COG1064         161 KANVKPGKWVAVVG-AGGLGHMAVQYAKAM-GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG  238 (339)
T ss_pred             hcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEECCC
Confidence            99999999999999 789999999999999 89999999999999999999999999877555555443 4999999999


Q ss_pred             C--chhhhhhhcCCCcEEEeeCCC-CC-C-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhh
Q 020320          222 D--CKNSFVVAKDNAPIVDITWPP-SH-P-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKD  286 (327)
Q Consensus       222 ~--~~~~~~~l~~~g~~v~~g~~~-~~-~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~  286 (327)
                      .  .+.+++.|+++|+++.+|.+. .. +           ..+..+......++++++++.++|++++..  .+.++++|
T Consensus       239 ~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i--~e~~~l~~  316 (339)
T COG1064         239 PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEI--LETIPLDE  316 (339)
T ss_pred             hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeE--EeeECHHH
Confidence            3  278899999999999999874 21 1           123345566789999999999999999974  26999999


Q ss_pred             HHHHHHHHHhCCCCceEEEEeC
Q 020320          287 VIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       287 i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      +++||+.|.+++..++.|+.+.
T Consensus       317 in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         317 INEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             HHHHHHHHHcCCeeeEEEecCC
Confidence            9999999999999999999874

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.7e-49  Score=333.00  Aligned_cols=302  Identities=25%  Similarity=0.351  Sum_probs=253.0

Q ss_pred             CceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSV   76 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v   76 (327)
                      +|+++++..+++   +++.+.|.|++ .|+||+|++.++|||+||+|.+.....   ..+-|+++|||.+|+|+++|++|
T Consensus         4 ~~~A~vl~g~~d---i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~V   80 (354)
T KOG0024|consen    4 DNLALVLRGKGD---IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEV   80 (354)
T ss_pred             ccceeEEEccCc---eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccc
Confidence            589999999998   99999999988 999999999999999999999976642   23579999999999999999999


Q ss_pred             CCCCCCCEEEEec------------ccccccC------cCCCCCceeeEEEeeccceecCCCCCCHHhhccc-chHHHHH
Q 020320           77 TKFNTGDEVYGNI------------QDFNAEG------KLKQLGALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTA  137 (327)
Q Consensus        77 ~~~~~Gd~V~~~~------------~~~~~~~------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~-~~~~~ta  137 (327)
                      +++++||||..-+            +.||.|.      .-..+|++++|++.++++++++|++++++++|++ |++  ++
T Consensus        81 k~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLs--V~  158 (354)
T KOG0024|consen   81 KHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLS--VG  158 (354)
T ss_pred             cccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchh--hh
Confidence            9999999996432            3466663      3346699999999999999999999999999987 655  59


Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC----hhhhc---
Q 020320          138 IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK----YEDIE---  210 (327)
Q Consensus       138 ~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~~~---  210 (327)
                      |||++++++++|.+|||+| +|++|+.+...||+++..++++++..+.|++.++++|++.+.+.....    +.+..   
T Consensus       159 ~HAcr~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~  237 (354)
T KOG0024|consen  159 VHACRRAGVKKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKA  237 (354)
T ss_pred             hhhhhhcCcccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhh
Confidence            9999999999999999999 899999999999999445677777899999999999999887654433    11111   


Q ss_pred             ---cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCC-----------CCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          211 ---EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPS-----------HPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       211 ---~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                         ..+|+.|||+|.   .+.++.+++.+|.++..++-..           ....+..++.+...+|..+++++++|+++
T Consensus       238 ~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~  317 (354)
T KOG0024|consen  238 LGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKID  317 (354)
T ss_pred             ccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcC
Confidence               239999999994   3888999999999888875331           11123344455566899999999999999


Q ss_pred             eeeCCCcccchhhHHHHHHHHHhCCC-CceEEEEeC
Q 020320          274 AQIDPTGPYKFKDVIEAFRYLETGRA-RGKVVISAF  308 (327)
Q Consensus       274 ~~~~~~~~~~~~~i~~a~~~~~~~~~-~gk~vv~~~  308 (327)
                      +.+++|+.|++++..+||+.+.+++. .-|+++..+
T Consensus       318 ~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~  353 (354)
T KOG0024|consen  318 VKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP  353 (354)
T ss_pred             chhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence            99999999999999999999988875 358888765

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.4e-46  Score=334.53  Aligned_cols=296  Identities=39%  Similarity=0.548  Sum_probs=254.1

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCC-CCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRP-LFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++.+++.++.+++.|+|.|.|++|||||||.++++|+.|....+|. .+..++|.++|.|++|+|+++|++|+.++
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            89999999999877999999999999999999999999999999999886 34567899999999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g  159 (327)
                      +||||+....   .|    ..|+|+||+.+|+++++++|+++++++|++++++++|||+++. ..++++|++|||+||+|
T Consensus        81 ~GdrV~~~~~---~~----~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaG  153 (326)
T COG0604          81 VGDRVAALGG---VG----RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAG  153 (326)
T ss_pred             CCCEEEEccC---CC----CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCc
Confidence            9999998740   00    4799999999999999999999999999999999999999996 58899999999999999


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      ++|++++|+||++ |+.+++++.++++.++++++|+|+++++++.++.+..      +++|+++|++|..  ...+.+++
T Consensus       154 gVG~~aiQlAk~~-G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~  232 (326)
T COG0604         154 GVGSAAIQLAKAL-GATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALA  232 (326)
T ss_pred             hHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhc
Confidence            9999999999999 7788888888888889999999999998888777754      3799999999954  66899999


Q ss_pred             CCCcEEEeeCCCC-CCc----------e--eeEE-eecC-----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320          232 DNAPIVDITWPPS-HPR----------A--IYSS-LTVS-----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR  292 (327)
Q Consensus       232 ~~g~~v~~g~~~~-~~~----------~--~~~~-~~~~-----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~  292 (327)
                      ++|+++.+|.... ...          .  .... ....     .+.++++.+++.+|++++..  ..+||+++..++..
T Consensus       233 ~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i--~~~~~l~e~~~a~a  310 (326)
T COG0604         233 PGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVI--DRVYPLAEAPAAAA  310 (326)
T ss_pred             cCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCccee--ccEechhhhHHHHH
Confidence            9999999987552 110          0  0011 1112     46788899999999999875  48999999766665


Q ss_pred             HHHh-CCCCceEEEEe
Q 020320          293 YLET-GRARGKVVISA  307 (327)
Q Consensus       293 ~~~~-~~~~gk~vv~~  307 (327)
                      .... ++..||+|+++
T Consensus       311 ~~~~~~~~~GKvvl~~  326 (326)
T COG0604         311 HLLLERRTTGKVVLKV  326 (326)
T ss_pred             HHHcccCCcceEEEeC
Confidence            4444 48889999874

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1e-46  Score=317.39  Aligned_cols=304  Identities=28%  Similarity=0.366  Sum_probs=254.7

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |+++|.+..++...++++++++.|+++++||+|+++|+|||++|+|.+.|.++..++|.++|||.+|+|+++|++|+.++
T Consensus         9 k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~V~~~k   88 (360)
T KOG0023|consen    9 KQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSNVTGFK   88 (360)
T ss_pred             hhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCCccccc
Confidence            46789998888766688899999999999999999999999999999999998899999999999999999999999999


Q ss_pred             CCCEEE-------------Eeccccccc------------CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHH
Q 020320           81 TGDEVY-------------GNIQDFNAE------------GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQ  135 (327)
Q Consensus        81 ~Gd~V~-------------~~~~~~~~~------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  135 (327)
                      +||||-             |.....++|            ++.-++|+|++|+++++.+++++|++++.+.||.+.++..
T Consensus        89 iGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGI  168 (360)
T KOG0023|consen   89 IGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGI  168 (360)
T ss_pred             ccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcce
Confidence            999982             111223444            2445678899999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-ccHHHHHHcCCCEEEeCC-CCChhhhc-cC
Q 020320          136 TAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFVKELGADKVIDYR-KTKYEDIE-EK  212 (327)
Q Consensus       136 ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-~~~~~~~~~g~~~v~~~~-~~~~~~~~-~~  212 (327)
                      |+|.+|...++.||+++.|.| .|++|.+++|+||+| |.+++++.+++ +|.+..+.||+|..++.. +.+..+.+ ..
T Consensus       169 TvYspLk~~g~~pG~~vgI~G-lGGLGh~aVq~AKAM-G~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~  246 (360)
T KOG0023|consen  169 TVYSPLKRSGLGPGKWVGIVG-LGGLGHMAVQYAKAM-GMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKT  246 (360)
T ss_pred             EEeehhHHcCCCCCcEEEEec-CcccchHHHHHHHHh-CcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHh
Confidence            999999999999999999999 555999999999999 99999999877 567777889999988766 45555443 33


Q ss_pred             ccEEEeCCC-----CchhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCceeee
Q 020320          213 FDVLYDTIG-----DCKNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKAQI  276 (327)
Q Consensus       213 ~d~v~d~~g-----~~~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~  276 (327)
                      .|..++++-     ..+.++.+++++|+++.+|.+...-.           .+..+..-.....++++++.+.+.+.+++
T Consensus       247 ~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ik~~I  326 (360)
T KOG0023|consen  247 TDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLIKSPI  326 (360)
T ss_pred             hcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCCcCce
Confidence            455555543     34788899999999999998763111           11122223467789999999999999874


Q ss_pred             CCCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320          277 DPTGPYKFKDVIEAFRYLETGRARGKVVISAFP  309 (327)
Q Consensus       277 ~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~  309 (327)
                         +..+++++++||+.|.++...++.|+++..
T Consensus       327 ---E~v~~~~v~~a~erm~kgdV~yRfVvD~s~  356 (360)
T KOG0023|consen  327 ---ELVKLSEVNEAYERMEKGDVRYRFVVDVSK  356 (360)
T ss_pred             ---EEEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence               889999999999999999999999998753

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=2.5e-47  Score=324.67  Aligned_cols=300  Identities=26%  Similarity=0.320  Sum_probs=255.5

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |+|+.++.++++|  |+++++.+++|++|||+||+.++|+|+||.+..+|.+|.. +|.++|||++|+|++||++|++++
T Consensus         2 k~~aAV~~~~~~P--l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vk   78 (366)
T COG1062           2 KTRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVK   78 (366)
T ss_pred             CceEeeeecCCCC--eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccC
Confidence            5788999888887  9999999999999999999999999999999999998877 999999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccC-------------c-----------CCCC--CceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEG-------------K-----------LKQL--GALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~-------------~-----------~~~~--g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||+|+....            ..+.|.             +           ...-  ++|++|..+++.++++++++.
T Consensus        79 pGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          79 PGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence            9999986542            233331             0           0122  389999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      +++.++++.++..|++.++ +.+++++|+++.|.| .|++|++++|-|+.. |+ ++|+++.+++|++++++||+++++|
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~a-gA~~IiAvD~~~~Kl~~A~~fGAT~~vn  236 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAA-GAGRIIAVDINPEKLELAKKFGATHFVN  236 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHc-CCceEEEEeCCHHHHHHHHhcCCceeec
Confidence            9999999999999999977 679999999999999 999999999999998 65 5666668999999999999999999


Q ss_pred             CCCC-Chhhhc-----cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCce------------eeEEee---cC
Q 020320          201 YRKT-KYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHPRA------------IYSSLT---VS  256 (327)
Q Consensus       201 ~~~~-~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~~------------~~~~~~---~~  256 (327)
                      .++. +..+.+     +++|.+||++|..   .+++.+..++|..+..|.+......            +..+..   .-
T Consensus       237 ~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p  316 (366)
T COG1062         237 PKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP  316 (366)
T ss_pred             chhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence            8776 354433     4899999999965   7788999999999999876532211            111111   12


Q ss_pred             HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          257 GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       257 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      +.++..+++++.+|+++...+.++.++|+|||+||+.|.+++.. |.||.
T Consensus       317 ~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         317 RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            47799999999999999999999999999999999999999987 44443

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=3.3e-43  Score=317.88  Aligned_cols=300  Identities=25%  Similarity=0.354  Sum_probs=247.8

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||+++++.++.   +++++.|.|.++++||+||+.++++|++|++.+.+.+. ...+|.++|||++|+|+++|+++++++
T Consensus         1 mka~~~~~~~~---l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   77 (339)
T cd08239           1 MRGAVFPGDRT---VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR   77 (339)
T ss_pred             CeEEEEecCCc---eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence            89999987655   99999999999999999999999999999998876542 233578999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccC------cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH
Q 020320           81 TGDEVYGNIQ------------DFNAEG------KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK  142 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~  142 (327)
                      +||+|++...            ..+.|.      +....|+|++|+.++.+.++++|+++++++++.++.++.|||+++.
T Consensus        78 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~  157 (339)
T cd08239          78 VGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALR  157 (339)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence            9999987542            112221      1234689999999999999999999999999999999999999998


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hc--cCccEE
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYED---IE--EKFDVL  216 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~--~~~d~v  216 (327)
                      ..++++|++|+|+| +|++|++++++||++ |++ ++++.+++++++.++++|++++++.++.+...   ..  +++|++
T Consensus       158 ~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~-G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~v  235 (339)
T cd08239         158 RVGVSGRDTVLVVG-AGPVGLGALMLARAL-GAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVA  235 (339)
T ss_pred             hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCCCEE
Confidence            88899999999998 699999999999998 888 77777889999999999999999876544211   11  379999


Q ss_pred             EeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCccc
Q 020320          217 YDTIGDC---KNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPY  282 (327)
Q Consensus       217 ~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~  282 (327)
                      ||++|..   ..++.+++++|+++.+|.......           .+........+.++++++++++|++++.++.+++|
T Consensus       236 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~  315 (339)
T cd08239         236 IECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVTHRF  315 (339)
T ss_pred             EECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEEEEe
Confidence            9999854   567899999999999886432111           11112223457899999999999998766678999


Q ss_pred             chhhHHHHHHHHHhCCCCceEEEEe
Q 020320          283 KFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       283 ~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +++++++||+.+.++. .+|+|+++
T Consensus       316 ~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         316 GLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             cHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            9999999999988765 68999864

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=3.6e-43  Score=321.13  Aligned_cols=300  Identities=24%  Similarity=0.305  Sum_probs=247.7

Q ss_pred             ceeEEecccCC------CcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCC
Q 020320            2 QNAWYYEEYGP------KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTS   75 (327)
Q Consensus         2 ~~~~v~~~~~~------~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   75 (327)
                      ||++++.++|.      ++.++++++|.|.++++||+||+.+++||++|++.+.+.++ ..+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence            89999999875      36799999999999999999999999999999999988653 357899999999999999999


Q ss_pred             CCCCCCCCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceec
Q 020320           76 VTKFNTGDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAK  117 (327)
Q Consensus        76 v~~~~~Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~  117 (327)
                      ++++++||||++...            ..+.|...                          ...|+|+||+.++++++++
T Consensus        80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~  159 (371)
T cd08281          80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK  159 (371)
T ss_pred             CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEE
Confidence            999999999986321            11222110                          0127899999999999999


Q ss_pred             CCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCC
Q 020320          118 KPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGA  195 (327)
Q Consensus       118 ~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~  195 (327)
                      +|+++++++|+.++.++.|||+++ ...++++|++|+|.| +|++|++++++||.+ |+ ++++++.+++|+++++++|+
T Consensus       160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~-G~~~Vi~~~~~~~r~~~a~~~Ga  237 (371)
T cd08281         160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAA-GASQVVAVDLNEDKLALARELGA  237 (371)
T ss_pred             CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHHcCC
Confidence            999999999999988899999987 568899999999998 799999999999999 88 57777889999999999999


Q ss_pred             CEEEeCCCCChhhhc-----cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC-Cc------------eeeEEee
Q 020320          196 DKVIDYRKTKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH-PR------------AIYSSLT  254 (327)
Q Consensus       196 ~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~-~~------------~~~~~~~  254 (327)
                      +++++..+.++.+.+     .++|++||++|..   ..++.+++++|+++.+|..... ..            .+..+..
T Consensus       238 ~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  317 (371)
T cd08281         238 TATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYM  317 (371)
T ss_pred             ceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEec
Confidence            999987765544322     3699999999853   6778999999999999864311 10            1111111


Q ss_pred             c---CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEE
Q 020320          255 V---SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVV  304 (327)
Q Consensus       255 ~---~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~v  304 (327)
                      .   ..+.+.++++++++|++++.++++++|+++|+++||+.+.+++..+|+|
T Consensus       318 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi  370 (371)
T cd08281         318 GSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI  370 (371)
T ss_pred             CCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence            1   2467889999999999987667789999999999999999998887765

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1e-43  Score=297.94  Aligned_cols=302  Identities=23%  Similarity=0.269  Sum_probs=253.5

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      +||+.|.-+++.|  |.++|+..++|+..||+||+.++++|+||.+.+.+..+...+|+++|||.+|+|+.+|++|++++
T Consensus         7 ~CKAAV~w~a~~P--L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk   84 (375)
T KOG0022|consen    7 TCKAAVAWEAGKP--LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVK   84 (375)
T ss_pred             EEeEeeeccCCCC--eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccC
Confidence            5899999888887  99999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcC-------------------------CCCC--ceeeEEEeeccceecCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKL-------------------------KQLG--ALAEFIVVEESLIAKKPKN  121 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~-------------------------~~~g--~~~~~~~v~~~~~~~~p~~  121 (327)
                      +||+|+.+..            ..|.|...                         ..-|  +|+||.+++...+.++++.
T Consensus        85 ~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~  164 (375)
T KOG0022|consen   85 PGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPS  164 (375)
T ss_pred             CCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCC
Confidence            9999985532            22333110                         1123  7999999999999999999


Q ss_pred             CCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          122 ISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      .+++.++++.+++.|+|.|. +.+++++|+++.|.| .|++|+++++-||+.+..++|.++-+++++++++++|+++.+|
T Consensus       165 aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iN  243 (375)
T KOG0022|consen  165 APLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFIN  243 (375)
T ss_pred             CChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecC
Confidence            99999999999999999987 679999999999999 9999999999999995557777888999999999999999998


Q ss_pred             CCCC--Chhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCCCce------eeEEe---------e
Q 020320          201 YRKT--KYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSHPRA------IYSSL---------T  254 (327)
Q Consensus       201 ~~~~--~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~~~~------~~~~~---------~  254 (327)
                      ..+.  ...+.+     .|+|..|||+|..   .+++.+.+.+ |.-+.+|........      +....         .
T Consensus       244 p~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~  323 (375)
T KOG0022|consen  244 PKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGF  323 (375)
T ss_pred             hhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccc
Confidence            7732  122222     5899999999976   5666777777 999988875532211      11100         1


Q ss_pred             cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          255 VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       255 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      -..+++..+++.+.+++++...++||.+||++|++||+.|.+++.. +.|+.
T Consensus       324 K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  324 KSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             cchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence            2358899999999999999999999999999999999999999887 66654

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-42  Score=314.02  Aligned_cols=297  Identities=19%  Similarity=0.271  Sum_probs=239.4

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhc-CCCC--CCCCCCcccccccEEEEEeCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLF--PSDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~-~~~~--~~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      +||+++++.++.   +++++.|.| ++++||||||.+++||++|++.+. +.++  ...+|.++|||++|+|+++  +++
T Consensus         4 ~~~~~~~~~~~~---~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~   77 (343)
T PRK09880          4 KTQSCVVAGKKD---VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS   77 (343)
T ss_pred             cceEEEEecCCc---eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence            578999987777   999999987 689999999999999999999875 3322  2357899999999999999  788


Q ss_pred             CCCCCCEEEEec------------ccccccCc-----C-----CCCCceeeEEEeeccceecCCCCCCHHhhcccchHHH
Q 020320           78 KFNTGDEVYGNI------------QDFNAEGK-----L-----KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQ  135 (327)
Q Consensus        78 ~~~~Gd~V~~~~------------~~~~~~~~-----~-----~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  135 (327)
                      ++++||||+...            +..+.|..     .     ..+|+|+||++++++.++++|++++++++++ ..++.
T Consensus        78 ~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~-~~~~~  156 (343)
T PRK09880         78 GLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAF-AEPLA  156 (343)
T ss_pred             cCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHh-hcHHH
Confidence            999999998642            11222321     0     2469999999999999999999999887653 44566


Q ss_pred             HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc---c
Q 020320          136 TAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE---E  211 (327)
Q Consensus       136 ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~  211 (327)
                      ++|+++.+....++++|+|.| +|++|++++|+|+++ |+ ++++++++++++++++++|++++++.++.++.+..   .
T Consensus       157 ~a~~al~~~~~~~g~~VlV~G-~G~vG~~aiqlak~~-G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g  234 (343)
T PRK09880        157 VAIHAAHQAGDLQGKRVFVSG-VGPIGCLIVAAVKTL-GAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKG  234 (343)
T ss_pred             HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCC
Confidence            899999877777899999998 699999999999999 87 57777889999999999999999987765544322   3


Q ss_pred             CccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCceeeeC
Q 020320          212 KFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKAQID  277 (327)
Q Consensus       212 ~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  277 (327)
                      ++|++||++|..   ..++.+++++|+++.+|.......           .+..+. ...+.++++++++++|++++.++
T Consensus       235 ~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~-~~~~~~~~~~~l~~~g~i~~~~~  313 (343)
T PRK09880        235 YFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSF-RFTEEFNTAVSWLANGVINPLPL  313 (343)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEe-eccccHHHHHHHHHcCCCCchhh
Confidence            599999999953   678899999999999986432110           111111 22467899999999999987666


Q ss_pred             CCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          278 PTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       278 ~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      .+++|+++|+++||+.+.++...+|+++.+
T Consensus       314 i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        314 LSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             eEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            789999999999999998888789999864

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.5e-42  Score=282.52  Aligned_cols=298  Identities=32%  Similarity=0.444  Sum_probs=263.1

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      .|-+++++.|..+++++++.|.|+|.++|++||..|+|+|.-|.....|-|.....|+++|-|.+|.|+.+|++++++++
T Consensus         9 ~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkv   88 (336)
T KOG1197|consen    9 LKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKV   88 (336)
T ss_pred             heEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcccccc
Confidence            36688999999999999999999999999999999999999999999999866778999999999999999999999999


Q ss_pred             CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCch
Q 020320           82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGG  160 (327)
Q Consensus        82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~  160 (327)
                      ||||.-+.          ..|.|+++..+|...+.++|+.+++.+|+.+.+.++|||.-++ -.++++|++|||+.|+|+
T Consensus        89 GDrVayl~----------~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGG  158 (336)
T KOG1197|consen   89 GDRVAYLN----------PFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGG  158 (336)
T ss_pred             ccEEEEec----------cchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccc
Confidence            99998875          4799999999999999999999999999999999999999886 589999999999999999


Q ss_pred             HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCC--chhhhhhhcC
Q 020320          161 VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGD--CKNSFVVAKD  232 (327)
Q Consensus       161 ~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~--~~~~~~~l~~  232 (327)
                      +|++++|+++.. |+.+|.+..+.++.+.+++.|++|.++.+.+++.+..      .|+|+++|++|.  ....+.+|++
T Consensus       159 VGlll~Ql~ra~-~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~  237 (336)
T KOG1197|consen  159 VGLLLCQLLRAV-GAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKP  237 (336)
T ss_pred             HHHHHHHHHHhc-CcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHhcc
Confidence            999999999999 9999999999999999999999999999998887754      589999999994  3778899999


Q ss_pred             CCcEEEeeCCCCCCceeeE------Eeec---------C-H----HHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320          233 NAPIVDITWPPSHPRAIYS------SLTV---------S-G----EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR  292 (327)
Q Consensus       233 ~g~~v~~g~~~~~~~~~~~------~~~~---------~-~----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~  292 (327)
                      .|.++.+|........+..      .+.+         . .    ....+++.++.+|.+++.+  -++||++++.+|..
T Consensus       238 ~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I--~~~ypls~vadA~~  315 (336)
T KOG1197|consen  238 MGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHI--DHVYPLSKVADAHA  315 (336)
T ss_pred             CceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceee--eeecchHHHHHHHH
Confidence            9999999865432211111      0000         0 1    2346788899999999865  68999999999999


Q ss_pred             HHHhCCCCceEEEEeCCCCC
Q 020320          293 YLETGRARGKVVISAFPYTE  312 (327)
Q Consensus       293 ~~~~~~~~gk~vv~~~~~~~  312 (327)
                      ++++....||+++.++++++
T Consensus       316 diesrktvGkvlLlp~~~~~  335 (336)
T KOG1197|consen  316 DIESRKTVGKVLLLPGPEKE  335 (336)
T ss_pred             HHHhhhccceEEEeCCcccc
Confidence            99999999999999987764

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=3.1e-42  Score=313.56  Aligned_cols=300  Identities=24%  Similarity=0.299  Sum_probs=246.3

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++++++.+  +++++.|.|.++++||+||+.++++|++|++.+.+.++ ..+|.++|||++|+|+++|+++++++
T Consensus         1 ~mka~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   77 (358)
T TIGR03451         1 TVRGVIARSKGAP--VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVA   77 (358)
T ss_pred             CcEEEEEccCCCC--CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccC
Confidence            7999999999865  89999999999999999999999999999999887643 34789999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcC------------------CCCCceeeEEEeeccceecCCCCCCHHhhccc
Q 020320           81 TGDEVYGNIQ------------DFNAEGKL------------------KQLGALAEFIVVEESLIAKKPKNISFEEAASL  130 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~  130 (327)
                      +||+|++...            ..+.|...                  ...|+|+||+.+++++++++|+++++++++.+
T Consensus        78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l  157 (358)
T TIGR03451        78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLL  157 (358)
T ss_pred             CCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhh
Confidence            9999986321            11222110                  12589999999999999999999999999998


Q ss_pred             chHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320          131 PLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYED  208 (327)
Q Consensus       131 ~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (327)
                      ++++.++|+++ ...++++|++|+|+| +|++|++++++||.+ |++ ++++++++++++.++++|++++++..+.++..
T Consensus       158 ~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~-G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~  235 (358)
T TIGR03451       158 GCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALA-GASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVE  235 (358)
T ss_pred             cccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHH
Confidence            88888999887 467899999999998 799999999999999 885 77777899999999999999999877655543


Q ss_pred             hc------cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC-C--c----------eeeEEee---cCHHHHHHH
Q 020320          209 IE------EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH-P--R----------AIYSSLT---VSGEILEKL  263 (327)
Q Consensus       209 ~~------~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~-~--~----------~~~~~~~---~~~~~~~~~  263 (327)
                      .+      +++|+++|++|..   ..++.+++++|+++.+|..... +  .          .+...+.   ...+.++.+
T Consensus       236 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  315 (358)
T TIGR03451       236 AIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPML  315 (358)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHH
Confidence            22      3699999999853   6778899999999999865321 0  0          0111111   135678999


Q ss_pred             HhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          264 RPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       264 ~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      ++++++|++++..+++++|+++|+++||+.+.+++.. |++++
T Consensus       316 ~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       316 VDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            9999999998766678999999999999999887765 77665

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=5.8e-42  Score=312.65  Aligned_cols=302  Identities=24%  Similarity=0.281  Sum_probs=245.4

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      +||++++..++..  ++++++|.|+++++||+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|+++++++
T Consensus         1 ~~~a~~~~~~~~~--l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~   78 (368)
T TIGR02818         1 KSRAAVAWAAGQP--LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVK   78 (368)
T ss_pred             CceEEEEecCCCC--eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCC
Confidence            5899998877643  99999999999999999999999999999999988765556799999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcCC--------------------------CCCceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKLK--------------------------QLGALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~~--------------------------~~g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||||.+...            ..+.|....                          ..|+|+||++++.++++++|+++
T Consensus        79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l  158 (368)
T TIGR02818        79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA  158 (368)
T ss_pred             CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence            9999987531            122232100                          13799999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      ++++++.++.++.++|+++ +..++++|++|+|+| +|++|++++++||++ |+ ++++++.++++++.++++|++++++
T Consensus       159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~-G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~  236 (368)
T TIGR02818       159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMA-KASRIIAIDINPAKFELAKKLGATDCVN  236 (368)
T ss_pred             CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCeEEc
Confidence            9999999998999999998 568899999999998 799999999999999 87 6888888999999999999999987


Q ss_pred             CCC--CChhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCC-Cc-----ee------eEEee---
Q 020320          201 YRK--TKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSH-PR-----AI------YSSLT---  254 (327)
Q Consensus       201 ~~~--~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~-~~-----~~------~~~~~---  254 (327)
                      ..+  .++....     .++|++||++|..   ..++.+++++ |+++.+|..... +.     ..      ..+..   
T Consensus       237 ~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  316 (368)
T TIGR02818       237 PNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGV  316 (368)
T ss_pred             ccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCC
Confidence            653  2222211     3799999999853   6788999886 999999864311 11     00      11111   


Q ss_pred             cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          255 VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       255 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      .....+.++++++++|++++..++++.|+|+|+++||+.+.+++. .|+++.+
T Consensus       317 ~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       317 KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            124578999999999999876677899999999999999987654 5888764

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.4e-41  Score=305.38  Aligned_cols=293  Identities=23%  Similarity=0.246  Sum_probs=241.1

Q ss_pred             eEEecccCCC--cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            4 AWYYEEYGPK--EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         4 ~~v~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ++.+.++|.+  ..+++++.|.|.++++||+||+.++++|++|++.+.|.++...+|.++|||++|+|+++|++++++++
T Consensus         1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   80 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV   80 (329)
T ss_pred             CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence            3567777765  46999999999999999999999999999999999887654445789999999999999999999999


Q ss_pred             CCEEEEec-----c--------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320           82 GDEVYGNI-----Q--------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT  143 (327)
Q Consensus        82 Gd~V~~~~-----~--------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~  143 (327)
                      ||+|+...     .        ..+.|.     +....|+|++|+.++.++++++|+++++++++.++.++.|||+++..
T Consensus        81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~  160 (329)
T TIGR02822        81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR  160 (329)
T ss_pred             CCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh
Confidence            99997421     1        122221     12246899999999999999999999999999888899999999988


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC-
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD-  222 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~-  222 (327)
                      .++++|++|+|+| +|++|++++++|+.+ |+++++++++++++++++++|++++++.....    .+++|+++++.+. 
T Consensus       161 ~~~~~g~~VlV~G-~g~iG~~a~~~a~~~-G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----~~~~d~~i~~~~~~  234 (329)
T TIGR02822       161 ASLPPGGRLGLYG-FGGSAHLTAQVALAQ-GATVHVMTRGAAARRLALALGAASAGGAYDTP----PEPLDAAILFAPAG  234 (329)
T ss_pred             cCCCCCCEEEEEc-CCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHhCCceeccccccC----cccceEEEECCCcH
Confidence            8999999999999 599999999999998 88888888999999999999999998743221    2368888887763 


Q ss_pred             --chhhhhhhcCCCcEEEeeCCCC-C-Cc----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHH
Q 020320          223 --CKNSFVVAKDNAPIVDITWPPS-H-PR----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVI  288 (327)
Q Consensus       223 --~~~~~~~l~~~g~~v~~g~~~~-~-~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~  288 (327)
                        ...++++++++|+++.+|.... . +.          .+..........+.++++++++|++++.   +++|+++|++
T Consensus       235 ~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i---~~~~~l~~~~  311 (329)
T TIGR02822       235 GLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVT---THTYPLSEAD  311 (329)
T ss_pred             HHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeE---EEEEeHHHHH
Confidence              3778899999999999986421 1 11          1111222345778999999999999752   6899999999


Q ss_pred             HHHHHHHhCCCCceEEE
Q 020320          289 EAFRYLETGRARGKVVI  305 (327)
Q Consensus       289 ~a~~~~~~~~~~gk~vv  305 (327)
                      +||+.+.+++..||+|+
T Consensus       312 ~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       312 RALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHcCCCceEEEe
Confidence            99999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.4e-41  Score=308.93  Aligned_cols=301  Identities=23%  Similarity=0.312  Sum_probs=240.8

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++.+...+..+.+++.+++.|.++++||+|||.+++||++|++.+.+.++...+|.++|||++|+|+++|++++++++
T Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~v   90 (360)
T PLN02586         11 QKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKE   90 (360)
T ss_pred             hheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCccCC
Confidence            56665555555566899999999999999999999999999999998876654567899999999999999999999999


Q ss_pred             CCEEEEe-----cc--------cccccCc------------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHH
Q 020320           82 GDEVYGN-----IQ--------DFNAEGK------------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQT  136 (327)
Q Consensus        82 Gd~V~~~-----~~--------~~~~~~~------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  136 (327)
                      ||+|+..     ++        .++.|..            ...+|+|+||++++++.++++|+++++++++.+++++.|
T Consensus        91 GdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t  170 (360)
T PLN02586         91 GDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGIT  170 (360)
T ss_pred             CCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHH
Confidence            9999742     11        1223321            123699999999999999999999999999999999999


Q ss_pred             HHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-HHHHHHcCCCEEEeCCCC-ChhhhccCc
Q 020320          137 AIEGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKT-KYEDIEEKF  213 (327)
Q Consensus       137 a~~~l~~-~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-~~~~~~~g~~~v~~~~~~-~~~~~~~~~  213 (327)
                      +|+++.. ...++|++|+|.| +|++|++++|+||.+ |+++++++.++++ .+.++++|++++++..+. .......++
T Consensus       171 a~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~  248 (360)
T PLN02586        171 VYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAF-GLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTM  248 (360)
T ss_pred             HHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCC
Confidence            9999864 5578999999987 799999999999999 8888887766655 456688999998875542 222223479


Q ss_pred             cEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC-Cc----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320          214 DVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH-PR----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPT  279 (327)
Q Consensus       214 d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~-~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~  279 (327)
                      |++||++|..   ..++++++++|+++.+|..... ..          .+..+.......++++++++++|++++..   
T Consensus       249 D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~---  325 (360)
T PLN02586        249 DYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITADI---  325 (360)
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCcE---
Confidence            9999999853   5688999999999999854211 10          01111122346799999999999998643   


Q ss_pred             cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          280 GPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      ++|+++|+++||+.+.+++..+|+++.+
T Consensus       326 ~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        326 ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            6899999999999999998889999987

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=2e-41  Score=310.50  Aligned_cols=302  Identities=21%  Similarity=0.289  Sum_probs=245.1

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      +||++++..+++.  +.+++.|.|.++++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++++++
T Consensus        10 ~mka~~~~~~~~~--~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   87 (381)
T PLN02740         10 TCKAAVAWGPGEP--LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDL   87 (381)
T ss_pred             eeEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcC
Confidence            5999999887743  88899999999999999999999999999999988653 33578999999999999999999999


Q ss_pred             CCCCEEEEecc------------cccccCcCC-----------------------------CCCceeeEEEeeccceecC
Q 020320           80 NTGDEVYGNIQ------------DFNAEGKLK-----------------------------QLGALAEFIVVEESLIAKK  118 (327)
Q Consensus        80 ~~Gd~V~~~~~------------~~~~~~~~~-----------------------------~~g~~~~~~~v~~~~~~~~  118 (327)
                      ++||||++...            ..+.|....                             ..|+|+||++++..+++++
T Consensus        88 ~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~i  167 (381)
T PLN02740         88 KAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKI  167 (381)
T ss_pred             CCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEEC
Confidence            99999987531            122232110                             2589999999999999999


Q ss_pred             CCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCC
Q 020320          119 PKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGAD  196 (327)
Q Consensus       119 p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~  196 (327)
                      |+++++++++.++.++.|||+++ +..++++|++|+|+| +|++|++++++||.+ |+ +++++++++++++.++++|++
T Consensus       168 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~-G~~~Vi~~~~~~~r~~~a~~~Ga~  245 (381)
T PLN02740        168 DPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARAR-GASKIIGVDINPEKFEKGKEMGIT  245 (381)
T ss_pred             CCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCCcEEEEcCChHHHHHHHHcCCc
Confidence            99999999999888899999987 568899999999998 799999999999999 87 577888899999999999999


Q ss_pred             EEEeCCCCC--hhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCCC------------ceeeEEe
Q 020320          197 KVIDYRKTK--YEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSHP------------RAIYSSL  253 (327)
Q Consensus       197 ~v~~~~~~~--~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~~------------~~~~~~~  253 (327)
                      ++++..+.+  +.+..     +++|++||++|..   ..++.+++++ |+++.+|......            ..+..+.
T Consensus       246 ~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~  325 (381)
T PLN02740        246 DFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSV  325 (381)
T ss_pred             EEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEe
Confidence            998866532  33221     2699999999953   6778889886 9999988653211            0011111


Q ss_pred             e--c-CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          254 T--V-SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       254 ~--~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      .  . ....+.++++++.+|++++..+.+++|+++|+++||+.+.+++. .|+++++
T Consensus       326 ~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        326 FGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             cCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence            1  1 13568999999999999876667899999999999999987765 4888763

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=6.2e-41  Score=306.06  Aligned_cols=301  Identities=23%  Similarity=0.281  Sum_probs=244.8

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      +||++++..++..  +++++.|.|.++++||+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|+++++++
T Consensus         2 ~~~a~~~~~~~~~--~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   79 (368)
T cd08300           2 TCKAAVAWEAGKP--LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVK   79 (368)
T ss_pred             cceEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCC
Confidence            6899998776543  89999999999999999999999999999999888765556899999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||+|++...            ..+.|...                          ...|+|+||+.++.+.++++|+++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  159 (368)
T cd08300          80 PGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA  159 (368)
T ss_pred             CCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence            9999987521            11222110                          024689999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      ++++++.++.++.++|+++ ....+++|++|+|+| +|++|++++++||.+ |+ +++++++++++++.++++|++++++
T Consensus       160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~-G~~~vi~~~~~~~~~~~~~~lGa~~~i~  237 (368)
T cd08300         160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAA-GASRIIGIDINPDKFELAKKFGATDCVN  237 (368)
T ss_pred             ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCEEEc
Confidence            9999999988889999987 468899999999998 799999999999999 88 5778889999999999999999998


Q ss_pred             CCCC--Chhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCC-CCc-----ee------eEEe---e
Q 020320          201 YRKT--KYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPS-HPR-----AI------YSSL---T  254 (327)
Q Consensus       201 ~~~~--~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~-~~~-----~~------~~~~---~  254 (327)
                      .++.  ++....     .++|++||++|..   ..++.+++++ |+++.+|.... ...     ..      ....   .
T Consensus       238 ~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  317 (368)
T cd08300         238 PKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGW  317 (368)
T ss_pred             ccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEeccc
Confidence            7653  233321     3799999999853   6788999886 99999986531 110     00      1111   1


Q ss_pred             cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          255 VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       255 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      ...+.+.++++++++|++++.++.+++|+|+|+++||+.+.+++. .|++++
T Consensus       318 ~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         318 KSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             CcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            135678999999999999876567899999999999999987765 488764

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=5.8e-41  Score=305.92  Aligned_cols=300  Identities=23%  Similarity=0.311  Sum_probs=240.9

Q ss_pred             eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTG   82 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   82 (327)
                      |++.+...+.++.+++.+.+.|.++++||+||+.+++||++|++.+.|.++...+|.++|||++|+|+++|++++++++|
T Consensus         6 ~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vG   85 (375)
T PLN02178          6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEG   85 (375)
T ss_pred             eeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCC
Confidence            55565556665668999999999999999999999999999999998866444578999999999999999999999999


Q ss_pred             CEEEEe-----cc--------cccccCcC------------CCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHH
Q 020320           83 DEVYGN-----IQ--------DFNAEGKL------------KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA  137 (327)
Q Consensus        83 d~V~~~-----~~--------~~~~~~~~------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta  137 (327)
                      |||...     ++        .++.|...            ...|+|+||++++++.++++|+++++++++.++++..|+
T Consensus        86 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta  165 (375)
T PLN02178         86 DRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITV  165 (375)
T ss_pred             CEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHH
Confidence            999742     21        12333211            126899999999999999999999999999998889999


Q ss_pred             HHHHHhcC--CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cHHHHHHcCCCEEEeCCCC-ChhhhccCc
Q 020320          138 IEGFKTAG--FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKT-KYEDIEEKF  213 (327)
Q Consensus       138 ~~~l~~~~--~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~~~~~~~g~~~v~~~~~~-~~~~~~~~~  213 (327)
                      |+++....  .++|++|+|.| +|++|++++++||++ |+++++++.+++ +.+.++++|++++++..+. .......++
T Consensus       166 ~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~  243 (375)
T PLN02178        166 YSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAF-GLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTM  243 (375)
T ss_pred             HHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHc-CCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCC
Confidence            99986543  36899999998 799999999999999 998888876654 4778889999999875432 122222479


Q ss_pred             cEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC-C----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320          214 DVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH-P----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPT  279 (327)
Q Consensus       214 d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~-~----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~  279 (327)
                      |++||++|..   ..++.+++++|+++.+|..... .          ..+..+.....+.+.++++++++|++++..   
T Consensus       244 D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i---  320 (375)
T PLN02178        244 DFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDI---  320 (375)
T ss_pred             cEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccE---
Confidence            9999999853   6788999999999999864311 1          011122223457899999999999998653   


Q ss_pred             cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          280 GPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +.|+|+|+++||+.+.+++..||+++.+
T Consensus       321 ~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        321 ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            6799999999999999998889999998

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=8.2e-41  Score=305.53  Aligned_cols=300  Identities=21%  Similarity=0.269  Sum_probs=244.5

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++..++..  +++++.|.|+++++||+||+.++++|++|++.+.+..+...+|.++|||++|+|+++|+++++++
T Consensus         2 ~~ka~~~~~~~~~--~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   79 (369)
T cd08301           2 TCKAAVAWEAGKP--LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLK   79 (369)
T ss_pred             ccEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccc
Confidence            7999999877654  99999999999999999999999999999999988765566799999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcCC---------------------------CCCceeeEEEeeccceecCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKLK---------------------------QLGALAEFIVVEESLIAKKPKN  121 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~~---------------------------~~g~~~~~~~v~~~~~~~~p~~  121 (327)
                      +||||++...            ..+.|....                           ..|+|+||++++..+++++|++
T Consensus        80 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  159 (369)
T cd08301          80 PGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPE  159 (369)
T ss_pred             cCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCC
Confidence            9999987521            122222110                           2478999999999999999999


Q ss_pred             CCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEE
Q 020320          122 ISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVI  199 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~  199 (327)
                      ++++++++++.++.++|+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +++++++++++.++++++|++.++
T Consensus       160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~-G~~~vi~~~~~~~~~~~~~~~Ga~~~i  237 (369)
T cd08301         160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIR-GASRIIGVDLNPSKFEQAKKFGVTEFV  237 (369)
T ss_pred             CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEE
Confidence            99999999988889999987 458899999999998 699999999999998 87 688888899999999999999888


Q ss_pred             eCCC--CChhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCC-C--c---eee------EEe--e
Q 020320          200 DYRK--TKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSH-P--R---AIY------SSL--T  254 (327)
Q Consensus       200 ~~~~--~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~-~--~---~~~------~~~--~  254 (327)
                      +..+  ..+.+.+     +++|++||++|..   ..++.+++++ |+++.+|..... .  .   .+.      ...  .
T Consensus       238 ~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  317 (369)
T cd08301         238 NPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGG  317 (369)
T ss_pred             cccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCC
Confidence            7654  2232211     3699999999853   6778999996 999998864311 1  0   011      111  1


Q ss_pred             c-CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          255 V-SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       255 ~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      . ....++++++++.+|++++..+++++|+++|+++||+.+.+++.. |+++
T Consensus       318 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         318 YKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             CChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence            1 235788999999999998766678999999999999999888765 7776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=6.7e-41  Score=306.96  Aligned_cols=299  Identities=20%  Similarity=0.227  Sum_probs=232.1

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCC-------CCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQ-------HDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGT   74 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~-------~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~   74 (327)
                      ||+++++.+++   ++++++|.|.++       +|||||||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|+
T Consensus         3 mka~v~~~~~~---~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~   78 (393)
T TIGR02819         3 NRGVVYLGPGK---VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGR   78 (393)
T ss_pred             ceEEEEecCCc---eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcC
Confidence            89999988876   999999999874       68999999999999999999987643 34689999999999999999


Q ss_pred             CCCCCCCCCEEEEec------------ccccccCcC---------------CCCCceeeEEEeecc--ceecCCCCCCH-
Q 020320           75 SVTKFNTGDEVYGNI------------QDFNAEGKL---------------KQLGALAEFIVVEES--LIAKKPKNISF-  124 (327)
Q Consensus        75 ~v~~~~~Gd~V~~~~------------~~~~~~~~~---------------~~~g~~~~~~~v~~~--~~~~~p~~~~~-  124 (327)
                      +|+++++||||....            +.++.|...               ..+|+|+||+.++..  +++++|++++. 
T Consensus        79 ~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~  158 (393)
T TIGR02819        79 DVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQAL  158 (393)
T ss_pred             ccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCccccc
Confidence            999999999997532            123334321               135999999999963  79999988653 


Q ss_pred             ---HhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHHHHcCCCEEEe
Q 020320          125 ---EEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVID  200 (327)
Q Consensus       125 ---~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~~~~g~~~v~~  200 (327)
                         ..++.+...+.++|+++.+.+++++++|+|.| +|++|++++++|+.+ |+++++++ .+++|+++++++|++.+..
T Consensus       159 ~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~-Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~  236 (393)
T TIGR02819       159 EKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAG-AGPVGLAAAASAQLL-GAAVVIVGDLNPARLAQARSFGCETVDL  236 (393)
T ss_pred             ccccceeeeccHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHcCCeEEec
Confidence               34566677888999999888899999999976 899999999999999 88866554 6778999999999985443


Q ss_pred             CCCCChhhh----c--cCccEEEeCCCC-----------------chhhhhhhcCCCcEEEeeCCCC-CCce--------
Q 020320          201 YRKTKYEDI----E--EKFDVLYDTIGD-----------------CKNSFVVAKDNAPIVDITWPPS-HPRA--------  248 (327)
Q Consensus       201 ~~~~~~~~~----~--~~~d~v~d~~g~-----------------~~~~~~~l~~~g~~v~~g~~~~-~~~~--------  248 (327)
                      ....++.+.    .  +++|++||++|.                 ...++.+++++|+++.+|.+.. .+..        
T Consensus       237 ~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~  316 (393)
T TIGR02819       237 SKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTG  316 (393)
T ss_pred             CCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccccccc
Confidence            333333321    1  369999999994                 3567899999999999997531 1100        


Q ss_pred             ---eeEE------e------ecCHHHHHHHHhHHHCCCceeeeCCC-cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          249 ---IYSS------L------TVSGEILEKLRPFIESGKLKAQIDPT-GPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       249 ---~~~~------~------~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                         +...      .      ....+.+.++++++++|++++..+.+ +.|+++|+++||+.+.+++. .|+++.+
T Consensus       317 ~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~  390 (393)
T TIGR02819       317 SLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDP  390 (393)
T ss_pred             ccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeC
Confidence               0000      0      00012346899999999998765555 78999999999999987754 7999986

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.4e-40  Score=302.69  Aligned_cols=300  Identities=22%  Similarity=0.266  Sum_probs=242.1

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      +||++++..+++  .++++++|.|.++++||+|||.++++|++|++.+.+..   .+|.++|||++|+|+++|+++++++
T Consensus        12 ~mka~~~~~~~~--~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~   86 (378)
T PLN02827         12 TCRAAVAWGAGE--ALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFE   86 (378)
T ss_pred             eeEEEEEecCCC--CceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccC
Confidence            589999977654  38999999999999999999999999999999887642   4688999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||+|++...            ..+.|...                          ...|+|+||+.+++.+++++|+++
T Consensus        87 ~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l  166 (378)
T PLN02827         87 KGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA  166 (378)
T ss_pred             CCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence            9999987632            12223211                          024899999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      ++++++.+++++.++|+++ +..++++|++|+|+| +|++|++++++|+++ |++ +++++.++++.+.++++|++++++
T Consensus       167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~-G~~~vi~~~~~~~~~~~a~~lGa~~~i~  244 (378)
T PLN02827        167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLR-GASQIIGVDINPEKAEKAKTFGVTDFIN  244 (378)
T ss_pred             CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcEEEc
Confidence            9999998888888899877 458899999999998 799999999999999 876 555557899999999999999987


Q ss_pred             CCCC--Chhhhc-----cCccEEEeCCCC---chhhhhhhcCC-CcEEEeeCCCCCCc------e------eeEEee--c
Q 020320          201 YRKT--KYEDIE-----EKFDVLYDTIGD---CKNSFVVAKDN-APIVDITWPPSHPR------A------IYSSLT--V  255 (327)
Q Consensus       201 ~~~~--~~~~~~-----~~~d~v~d~~g~---~~~~~~~l~~~-g~~v~~g~~~~~~~------~------~~~~~~--~  255 (327)
                      .++.  ++...+     .++|++||++|.   ...++..++++ |+++.+|.+.....      .      +.....  .
T Consensus       245 ~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  324 (378)
T PLN02827        245 PNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGW  324 (378)
T ss_pred             ccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCC
Confidence            6642  332221     379999999995   36788999998 99999886532111      0      111111  1


Q ss_pred             -CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          256 -SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       256 -~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                       ....++.+++++++|++++..+.+++|+++++++||+.+.+++. .|+||+++
T Consensus       325 ~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~  377 (378)
T PLN02827        325 KPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP  377 (378)
T ss_pred             chhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence             23568899999999999985566899999999999999988876 59999875

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=2.2e-40  Score=295.05  Aligned_cols=287  Identities=21%  Similarity=0.220  Sum_probs=225.0

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeC-hHhHhhhcCCCCC---CCCCCcccccccEEEEEeCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALN-PIDSKRRQRPLFP---SDFPAVPGCDMAGIVVAKGTSV   76 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~-~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~v   76 (327)
                      |||++++..++.   +++.+.|.|.++++||+||+.+++|| ++|++.+.|.++.   ..+|.++|||++|+|+++|+++
T Consensus         1 ~~ka~~~~~~~~---l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v   77 (308)
T TIGR01202         1 KTQAIVLSGPNQ---IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT   77 (308)
T ss_pred             CceEEEEeCCCe---EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC
Confidence            799999987665   99999999999999999999999996 7999988887532   3579999999999999999998


Q ss_pred             CCCCCCCEEEEecccccccCc--CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEE
Q 020320           77 TKFNTGDEVYGNIQDFNAEGK--LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFI  154 (327)
Q Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~--~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI  154 (327)
                       ++++||||+....   .|..  ....|+|+||+.++++.++++|++++++. +++. ...|||+++.... .++++++|
T Consensus        78 -~~~vGdrV~~~~~---~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~~~-~~~~~vlV  150 (308)
T TIGR01202        78 -GFRPGDRVFVPGS---NCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAGAE-VKVLPDLI  150 (308)
T ss_pred             -CCCCCCEEEEeCc---cccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHhcc-cCCCcEEE
Confidence             6999999987432   2221  12369999999999999999999998865 4443 3578999997643 36889999


Q ss_pred             EcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---hhhhhhh
Q 020320          155 VGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---KNSFVVA  230 (327)
Q Consensus       155 ~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~l  230 (327)
                      +| +|++|++++|+||++ |+++++++ .++++++.+..+   ++++..+.    ...++|++||++|..   +.++.++
T Consensus       151 ~G-~G~vG~~a~q~ak~~-G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----~~~g~Dvvid~~G~~~~~~~~~~~l  221 (308)
T TIGR01202       151 VG-HGTLGRLLARLTKAA-GGSPPAVWETNPRRRDGATGY---EVLDPEKD----PRRDYRAIYDASGDPSLIDTLVRRL  221 (308)
T ss_pred             EC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHhhhhc---cccChhhc----cCCCCCEEEECCCCHHHHHHHHHhh
Confidence            98 899999999999998 88866554 555666555443   44543221    234799999999953   7789999


Q ss_pred             cCCCcEEEeeCCCCC-Cc----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCC
Q 020320          231 KDNAPIVDITWPPSH-PR----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRA  299 (327)
Q Consensus       231 ~~~g~~v~~g~~~~~-~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~  299 (327)
                      +++|+++.+|..... ..          .+..+.....++++++++++++|++++.++.++.|+++|+++||+.+.++..
T Consensus       222 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~  301 (308)
T TIGR01202       222 AKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPD  301 (308)
T ss_pred             hcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcC
Confidence            999999999864321 10          1111222345789999999999999987678999999999999998877766


Q ss_pred             CceEEEE
Q 020320          300 RGKVVIS  306 (327)
Q Consensus       300 ~gk~vv~  306 (327)
                      .+|++++
T Consensus       302 ~~Kv~~~  308 (308)
T TIGR01202       302 CLKMILD  308 (308)
T ss_pred             ceEEEeC
Confidence            7898874

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.2e-39  Score=296.19  Aligned_cols=300  Identities=23%  Similarity=0.285  Sum_probs=242.5

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ++++++.++++.  +++++++.|+++++||+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|++++++++
T Consensus        10 ~~~~~~~~~~~~--~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~   87 (357)
T PLN02514         10 TTGWAARDPSGH--LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV   87 (357)
T ss_pred             EEEEEEecCCCC--ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence            789999988864  999999999999999999999999999999998876644457899999999999999999999999


Q ss_pred             CCEEEEe-----cc--------cccccCc------------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHH
Q 020320           82 GDEVYGN-----IQ--------DFNAEGK------------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQT  136 (327)
Q Consensus        82 Gd~V~~~-----~~--------~~~~~~~------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  136 (327)
                      ||+|+..     ++        ..+.|..            ....|+|++|+.++.+.++++|+++++++++.++.++.|
T Consensus        88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t  167 (357)
T PLN02514         88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVT  167 (357)
T ss_pred             CCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHH
Confidence            9999742     11        1222321            123699999999999999999999999999999999999


Q ss_pred             HHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCC-hhhhccCc
Q 020320          137 AIEGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTK-YEDIEEKF  213 (327)
Q Consensus       137 a~~~l~~-~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~-~~~~~~~~  213 (327)
                      ||+++.. ...++|++++|+| +|++|++++++||++ |+++++++.+++++..+ +++|++++++..+.. ......++
T Consensus       168 a~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~-G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~  245 (357)
T PLN02514        168 VYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAM-GHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSL  245 (357)
T ss_pred             HHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCC
Confidence            9999965 4557999999997 799999999999999 88888888777666544 679998877654321 22223579


Q ss_pred             cEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320          214 DVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPT  279 (327)
Q Consensus       214 d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~  279 (327)
                      |++||++|.   ...++.+++++|+++.+|......           ..+..+......+++++++++++|++++.   .
T Consensus       246 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~---i  322 (357)
T PLN02514        246 DYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSM---I  322 (357)
T ss_pred             cEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCc---E
Confidence            999999984   367889999999999998643111           01112222344679999999999998753   3


Q ss_pred             cccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          280 GPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      +.|+++|+.+||+.+.+++..+|+++.+.
T Consensus       323 ~~~~l~~~~~A~~~~~~~~~~gk~v~~~~  351 (357)
T PLN02514        323 EVVKMDYVNTAFERLEKNDVRYRFVVDVA  351 (357)
T ss_pred             EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence            67999999999999999988899999874

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-39  Score=294.63  Aligned_cols=300  Identities=23%  Similarity=0.316  Sum_probs=239.2

Q ss_pred             ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||+++++.++.   +++.+.|.|.+ +++||+||+.++++|++|++.+.+. ....+|.++|||++|+|+++|+++++++
T Consensus         1 Mka~~~~~~~~---~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~-~~~~~p~i~G~e~~G~V~~vG~~v~~~~   76 (347)
T PRK10309          1 MKSVVNDTDGI---VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKN-GAHYYPITLGHEFSGYVEAVGSGVDDLH   76 (347)
T ss_pred             CceEEEeCCCc---eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCC-CCCCCCcccccceEEEEEEeCCCCCCCC
Confidence            89999998765   99999999998 5999999999999999999754221 1123688999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320           81 TGDEVYGNIQ------------DFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT  143 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~  143 (327)
                      +||+|++...            .++.|..     ....|+|++|++++.++++++|+++++++++++. .+.++|+++..
T Consensus        77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~~~  155 (347)
T PRK10309         77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHL  155 (347)
T ss_pred             CCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHHHh
Confidence            9999997632            1222211     1236999999999999999999999999998763 34458888877


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hc--cCcc-EE
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYED---IE--EKFD-VL  216 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~--~~~d-~v  216 (327)
                      ..++++++|+|+| +|++|++++++|+++ |++ ++++++++++++.++++|++++++.++.....   ..  .++| ++
T Consensus       156 ~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v  233 (347)
T PRK10309        156 AQGCEGKNVIIIG-AGTIGLLAIQCAVAL-GAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLI  233 (347)
T ss_pred             cCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCCCeEE
Confidence            8889999999997 799999999999999 887 56666889999999999999998876544221   11  3678 99


Q ss_pred             EeCCCCc---hhhhhhhcCCCcEEEeeCCCCC---Cc-----------eeeEEeec-----CHHHHHHHHhHHHCCCcee
Q 020320          217 YDTIGDC---KNSFVVAKDNAPIVDITWPPSH---PR-----------AIYSSLTV-----SGEILEKLRPFIESGKLKA  274 (327)
Q Consensus       217 ~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~---~~-----------~~~~~~~~-----~~~~~~~~~~l~~~g~~~~  274 (327)
                      |||+|..   ..++++++++|+++.+|.....   +.           .+......     ..+.++++++++++|++++
T Consensus       234 ~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~  313 (347)
T PRK10309        234 LETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSL  313 (347)
T ss_pred             EECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCc
Confidence            9999953   7788999999999999854321   10           11111111     2467899999999999987


Q ss_pred             eeCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          275 QIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       275 ~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      .++.++.|+++|+++|++.+.++...||++++++
T Consensus       314 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  347 (347)
T PRK10309        314 EPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP  347 (347)
T ss_pred             hhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence            6677899999999999999998888899999763

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=1.9e-39  Score=291.54  Aligned_cols=290  Identities=22%  Similarity=0.334  Sum_probs=239.0

Q ss_pred             ceeEEecccCCC---cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCC
Q 020320            2 QNAWYYEEYGPK---EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         2 ~~~~v~~~~~~~---~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      ||++++++++.+   +.+++.+.|.|.++++||+||+.++++|++|++.+.+.++ ...+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            899999998865   4689999999999999999999999999999999887653 235689999999999999999999


Q ss_pred             C-CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEE-
Q 020320           78 K-FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIV-  155 (327)
Q Consensus        78 ~-~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~-  155 (327)
                      + +++||+|+++..         .+|+|++|++++++.++++|+++++++++.+++.+.|||..+..... ++++++|+ 
T Consensus        81 ~~~~vGd~V~~~~~---------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~~  150 (324)
T cd08291          81 AQSLIGKRVAFLAG---------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETARE-EGAKAVVHT  150 (324)
T ss_pred             ccCCCCCEEEecCC---------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEEc
Confidence            6 999999998642         14899999999999999999999999999888888899866655555 55666665 


Q ss_pred             cCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhh
Q 020320          156 GGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSF  227 (327)
Q Consensus       156 ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~  227 (327)
                      +++|++|++++|+|+.+ |++++++++++++.+.++++|++++++.+..++....      +++|++||++|..  ...+
T Consensus       151 ~g~g~vG~~a~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~  229 (324)
T cd08291         151 AAASALGRMLVRLCKAD-GIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQIL  229 (324)
T ss_pred             cCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHH
Confidence            78999999999999999 9999888899999999999999999988776654432      3799999999854  5678


Q ss_pred             hhhcCCCcEEEeeCCCCCC---c----------eeeEEe--e----cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHH
Q 020320          228 VVAKDNAPIVDITWPPSHP---R----------AIYSSL--T----VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVI  288 (327)
Q Consensus       228 ~~l~~~g~~v~~g~~~~~~---~----------~~~~~~--~----~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~  288 (327)
                      .+++++|+++.+|......   .          .+....  .    ...+.+++++++++ +.+++.  ++++|+++|++
T Consensus       230 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--i~~~~~l~~~~  306 (324)
T cd08291         230 LAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTT--FASRYPLALTL  306 (324)
T ss_pred             HhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccccc--eeeEEcHHHHH
Confidence            9999999999987532111   0          011110  0    12456788889988 888764  47899999999


Q ss_pred             HHHHHHHhCCCCceEEE
Q 020320          289 EAFRYLETGRARGKVVI  305 (327)
Q Consensus       289 ~a~~~~~~~~~~gk~vv  305 (327)
                      +||+.+.++...||+++
T Consensus       307 ~a~~~~~~~~~~Gkvv~  323 (324)
T cd08291         307 EAIAFYSKNMSTGKKLL  323 (324)
T ss_pred             HHHHHHHhCCCCCeEEe
Confidence            99999999988899886

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.6e-39  Score=294.83  Aligned_cols=297  Identities=16%  Similarity=0.273  Sum_probs=239.4

Q ss_pred             EEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC-CCCCCCCcccccccEEEEEeCCCCCCCCCCC
Q 020320            5 WYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FPSDFPAVPGCDMAGIVVAKGTSVTKFNTGD   83 (327)
Q Consensus         5 ~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   83 (327)
                      +++++++.+  +++++.|.|.++++||+||+.++++|++|++.+.+.+ +...+|.++|||++|+|+++|++++.+ +||
T Consensus         2 ~~~~~~g~~--~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd   78 (349)
T TIGR03201         2 WMMTEPGKP--MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGK   78 (349)
T ss_pred             ceEecCCCC--ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence            567777654  8999999999999999999999999999998874433 234578999999999999999999887 999


Q ss_pred             EEEEec------------ccccccCc-----CCCCCceeeEEEeeccceecCCC------CCCHHhhcccchHHHHHHHH
Q 020320           84 EVYGNI------------QDFNAEGK-----LKQLGALAEFIVVEESLIAKKPK------NISFEEAASLPLAVQTAIEG  140 (327)
Q Consensus        84 ~V~~~~------------~~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~------~~~~~~aa~~~~~~~ta~~~  140 (327)
                      +|+...            +..+.|..     ....|+|+||+.++.+.++++|+      +++++.++.++.++.++|++
T Consensus        79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a  158 (349)
T TIGR03201        79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA  158 (349)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence            998632            11222321     12469999999999999999998      89999998888899999999


Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC---hhhhc------c
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK---YEDIE------E  211 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~------~  211 (327)
                      +....+++|++|+|+|+ |++|++++++|+++ |++++++++++++++.++++|++++++..+.+   +.+..      +
T Consensus       159 ~~~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~-G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~  236 (349)
T TIGR03201       159 AVQAGLKKGDLVIVIGA-GGVGGYMVQTAKAM-GAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKAR  236 (349)
T ss_pred             HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccC
Confidence            98888999999999996 99999999999999 88888888999999999999999988765532   22211      3


Q ss_pred             Ccc----EEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC-Cc----------eeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          212 KFD----VLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH-PR----------AIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       212 ~~d----~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~-~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                      ++|    ++||++|..   ..++.+++++|+++.+|..... ..          .+...+....++++++++++++|+++
T Consensus       237 g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~  316 (349)
T TIGR03201       237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQ  316 (349)
T ss_pred             CCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCC
Confidence            565    899999964   5678999999999999865321 10          11112223457899999999999998


Q ss_pred             eeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          274 AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       274 ~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +..+. +.|+++++++||+.+.++...+|+++++
T Consensus       317 ~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       317 LGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             cccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence            75444 4799999999999999998889988853

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=3.4e-39  Score=294.33  Aligned_cols=299  Identities=22%  Similarity=0.260  Sum_probs=241.6

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      +||++++..+++.  +++++.|.|.++++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++++
T Consensus         2 ~~ka~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   78 (365)
T cd08277           2 KCKAAVAWEAGKP--LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLK   78 (365)
T ss_pred             ccEEEEEccCCCC--cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCC
Confidence            6899999876643  89999999999999999999999999999999887654 45789999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcC-------------------------CCCCceeeEEEeeccceecCCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKL-------------------------KQLGALAEFIVVEESLIAKKPKNIS  123 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~~p~~~~  123 (327)
                      +||+|++...            ..+.|...                         ...|+|+||++++.++++++|++++
T Consensus        79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~  158 (365)
T cd08277          79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP  158 (365)
T ss_pred             CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence            9999987521            11222111                         1258999999999999999999999


Q ss_pred             HHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          124 FEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       124 ~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      +++++.++.++.|||+++ +..++++|++|+|+| +|++|++++++|+++ |+ +++++++++++++.++++|++++++.
T Consensus       159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~  236 (365)
T cd08277         159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIA-GASRIIGVDINEDKFEKAKEFGATDFINP  236 (365)
T ss_pred             HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCcEecc
Confidence            999999999999999987 568899999999997 799999999999999 88 57777889999999999999999876


Q ss_pred             CCCC--hhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCC--C---ce------eeEEee--c-C
Q 020320          202 RKTK--YEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSH--P---RA------IYSSLT--V-S  256 (327)
Q Consensus       202 ~~~~--~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~--~---~~------~~~~~~--~-~  256 (327)
                      .+.+  +.+..     +++|++||++|..   ..++.+++++ |+++.+|.....  +   ..      +..+..  + .
T Consensus       237 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  316 (365)
T cd08277         237 KDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGGFKS  316 (365)
T ss_pred             ccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhhCCEEEeeecCCCCh
Confidence            5532  22211     4799999999853   6788899885 999998864311  1   01      111111  1 1


Q ss_pred             HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          257 GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       257 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      ...++++++++++++++..++.++.|+++|+++||+.+.+++ ..|+++
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i  364 (365)
T cd08277         317 RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI  364 (365)
T ss_pred             HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence            457899999999999887666789999999999999998777 357775

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=5.1e-39  Score=290.34  Aligned_cols=291  Identities=16%  Similarity=0.164  Sum_probs=221.1

Q ss_pred             eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC----CCCCCcccccccEEEEEeCCCCCC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP----SDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~----~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      |+.+++.+++   +++++.|.|+ +++||+|||.++|||++|++.+.|.+..    ..+|.++|||++|+|+++|.+  +
T Consensus         4 ~~~~~~~~~~---~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~   77 (341)
T cd08237           4 QVYRLVRPKF---FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T   77 (341)
T ss_pred             cceEEeccce---EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence            5778887765   9999999995 9999999999999999999999886532    357999999999999998874  6


Q ss_pred             CCCCCEEEEeccc---------ccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-
Q 020320           79 FNTGDEVYGNIQD---------FNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-  143 (327)
Q Consensus        79 ~~~Gd~V~~~~~~---------~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-  143 (327)
                      +++||||+.....         .+.|.     +...+|+|+||+++|+++++++|+++++++|+++ ..+.++|+++.. 
T Consensus        78 ~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~~~  156 (341)
T cd08237          78 YKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAISRF  156 (341)
T ss_pred             cCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHHHH
Confidence            9999999875321         11221     1124699999999999999999999999988754 466778998853 


Q ss_pred             --cCCCCCCEEEEEcCCchHHHHHHHHHHh-hcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCC
Q 020320          144 --AGFKTGQTIFIVGGAGGVGTLVIQLAKH-FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       144 --~~~~~~~~vlI~ga~g~~G~~a~~la~~-~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~  220 (327)
                        ..+++|++|+|+| +|++|+++++++++ +++.++++++.+++|++++++++++..++.    +.. ..++|++||++
T Consensus       157 ~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~----~~~-~~g~d~viD~~  230 (341)
T cd08237         157 EQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD----IPE-DLAVDHAFECV  230 (341)
T ss_pred             hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh----hhh-ccCCcEEEECC
Confidence              4578999999999 79999999999986 534678788889999999988776544321    111 12699999999


Q ss_pred             CC------chhhhhhhcCCCcEEEeeCCCCC-C----------ceeeEEeecCHHHHHHHHhHHHCC---CceeeeCCCc
Q 020320          221 GD------CKNSFVVAKDNAPIVDITWPPSH-P----------RAIYSSLTVSGEILEKLRPFIESG---KLKAQIDPTG  280 (327)
Q Consensus       221 g~------~~~~~~~l~~~g~~v~~g~~~~~-~----------~~~~~~~~~~~~~~~~~~~l~~~g---~~~~~~~~~~  280 (327)
                      |.      ...++++++++|+++.+|..... +          ..+..+.....+.+++++++++++   +.+..+++++
T Consensus       231 G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  310 (341)
T cd08237         231 GGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLVGG  310 (341)
T ss_pred             CCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHhcc
Confidence            94      36788999999999999864311 1          111222223457799999999999   2234446678


Q ss_pred             ccch---hhHHHHHHHHHhCCCCceEEEEe
Q 020320          281 PYKF---KDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       281 ~~~~---~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      .|++   +++.++|+.+.++ ..||+|+++
T Consensus       311 ~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~  339 (341)
T cd08237         311 VFPVRSINDIHRAFESDLTN-SWGKTVMEW  339 (341)
T ss_pred             ccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence            8997   5666677666544 678999976

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=7.4e-39  Score=288.70  Aligned_cols=300  Identities=26%  Similarity=0.324  Sum_probs=227.8

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCC-cccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPA-VPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |+++++..++..  ..+++.+.|.+.+++|+|||.+++||+||++.+.+..+....|. ++|||++|+|+++| .++.++
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~   77 (350)
T COG1063           1 MKAAVVYVGGGD--VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFK   77 (350)
T ss_pred             CceeEEEecCCc--cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCC
Confidence            666776665543  33777777778999999999999999999999999876666666 99999999999999 778899


Q ss_pred             CCCEEEEec------------ccccccCcC----------CCCCceeeEEEeeccceec-CCCCCCHHhhcccchHHHHH
Q 020320           81 TGDEVYGNI------------QDFNAEGKL----------KQLGALAEFIVVEESLIAK-KPKNISFEEAASLPLAVQTA  137 (327)
Q Consensus        81 ~Gd~V~~~~------------~~~~~~~~~----------~~~g~~~~~~~v~~~~~~~-~p~~~~~~~aa~~~~~~~ta  137 (327)
                      +||||+..+            +.++.|...          ..+|+|+||+++|.++.++ +|+++ +.+++++...+.++
T Consensus        78 ~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~  156 (350)
T COG1063          78 VGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATA  156 (350)
T ss_pred             CCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhh
Confidence            999997653            234556521          1579999999999755555 57777 44455555556679


Q ss_pred             HHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhhhc----
Q 020320          138 IEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKE-LGADKVIDYRKTKYEDIE----  210 (327)
Q Consensus       138 ~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~----  210 (327)
                      +++. ......++.+|+|+| +|++|++++++++.+ |+ ++++++.+++|++++++ .|++.+++...++.....    
T Consensus       157 ~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~-Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t  234 (350)
T COG1063         157 YHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLL-GASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELT  234 (350)
T ss_pred             hhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHh
Confidence            7774 344445555999999 999999999999999 65 55555689999999998 666766655443322211    


Q ss_pred             --cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC--Cc----------eeeEEee-cCHHHHHHHHhHHHCCCc
Q 020320          211 --EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH--PR----------AIYSSLT-VSGEILEKLRPFIESGKL  272 (327)
Q Consensus       211 --~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~--~~----------~~~~~~~-~~~~~~~~~~~l~~~g~~  272 (327)
                        .++|++|||+|..   ..++.+++++|+++.+|.+...  ..          .+..+.. .....++.+++++++|++
T Consensus       235 ~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i  314 (350)
T COG1063         235 GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKI  314 (350)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCC
Confidence              3799999999955   6889999999999999976543  21          1122222 344679999999999999


Q ss_pred             eeeeCCCcccchhhHHHHHHHHHhCCC-CceEEEEe
Q 020320          273 KAQIDPTGPYKFKDVIEAFRYLETGRA-RGKVVISA  307 (327)
Q Consensus       273 ~~~~~~~~~~~~~~i~~a~~~~~~~~~-~gk~vv~~  307 (327)
                      ++..+.++.++++++++||+.+.+.+. ..|+++.+
T Consensus       315 ~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         315 DPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             ChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            998777899999999999999987554 56888753

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.4e-38  Score=288.99  Aligned_cols=298  Identities=24%  Similarity=0.346  Sum_probs=241.2

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---C--------CCCCCCcccccccEEEE
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---F--------PSDFPAVPGCDMAGIVV   70 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~--------~~~~p~~~G~e~~G~V~   70 (327)
                      ||++++++++.   +.++++|.|+++++||+||+.++++|++|++.+.+..   +        ...+|.++|||++|+|+
T Consensus         1 mka~~~~~~~~---l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   77 (351)
T cd08233           1 MKAARYHGRKD---IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV   77 (351)
T ss_pred             CceEEEecCCc---eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence            89999988765   9999999999999999999999999999988665321   1        12368899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecc------------cccccCcC------CCCCceeeEEEeeccceecCCCCCCHHhhcccch
Q 020320           71 AKGTSVTKFNTGDEVYGNIQ------------DFNAEGKL------KQLGALAEFIVVEESLIAKKPKNISFEEAASLPL  132 (327)
Q Consensus        71 ~vG~~v~~~~~Gd~V~~~~~------------~~~~~~~~------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  132 (327)
                      ++|++++++++||+|++...            ..+.|+..      ...|+|++|+.++.+.++++|+++++++++.+ .
T Consensus        78 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~  156 (351)
T cd08233          78 EVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-E  156 (351)
T ss_pred             EeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-c
Confidence            99999999999999987431            11122111      12689999999999999999999999998765 5


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-
Q 020320          133 AVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-  210 (327)
Q Consensus       133 ~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-  210 (327)
                      .+.+||+++...++++|++|+|+| +|.+|++++++|+.+ |+ +++++++++++.++++++|++.+++.++.++.+.+ 
T Consensus       157 ~~~ta~~~l~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~-G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~  234 (351)
T cd08233         157 PLAVAWHAVRRSGFKPGDTALVLG-AGPIGLLTILALKAA-GASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVR  234 (351)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHH
Confidence            667899999778899999999998 699999999999999 88 67777788899999999999999988776655432 


Q ss_pred             -----cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCC
Q 020320          211 -----EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGK  271 (327)
Q Consensus       211 -----~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~  271 (327)
                           +++|+++|++|.   ...++++++++|+++.+|......           ..+........+.++++++++++|+
T Consensus       235 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~  314 (351)
T cd08233         235 KLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGK  314 (351)
T ss_pred             HHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCC
Confidence                 359999999984   367889999999999998654111           1111122234578999999999999


Q ss_pred             ceeeeCCCcccchhhH-HHHHHHHHhCCCC-ceEEE
Q 020320          272 LKAQIDPTGPYKFKDV-IEAFRYLETGRAR-GKVVI  305 (327)
Q Consensus       272 ~~~~~~~~~~~~~~~i-~~a~~~~~~~~~~-gk~vv  305 (327)
                      +++.+..+++|+++|+ ++||+.+.+++.. +|+++
T Consensus       315 l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         315 IDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             CChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            9765455789999996 7999999888875 89887

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=1.3e-38  Score=289.61  Aligned_cols=296  Identities=19%  Similarity=0.226  Sum_probs=223.6

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      ||+++++..+ ++ ++++++|.|+++++|||||+.+++||++|++.+.|.++   ...+|.++|||++|+|+++|++ ++
T Consensus         1 mka~~~~~~~-~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~   77 (355)
T cd08230           1 MKAIAVKPGK-PG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG   77 (355)
T ss_pred             CceeEecCCC-CC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence            8999998543 33 99999999999999999999999999999999988652   2346889999999999999999 99


Q ss_pred             CCCCCEEEEeccc------------ccccCcC--------CCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHH
Q 020320           79 FNTGDEVYGNIQD------------FNAEGKL--------KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI  138 (327)
Q Consensus        79 ~~~Gd~V~~~~~~------------~~~~~~~--------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~  138 (327)
                      +++||||+.....            .+.|...        ..+|+|+||+.++++.++++|++++ +.+ .+..++.+++
T Consensus        78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a-~~~~p~~~~~  155 (355)
T cd08230          78 LSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVG-VLLEPLSVVE  155 (355)
T ss_pred             CCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cce-eecchHHHHH
Confidence            9999999865321            1222110        2468999999999999999999998 433 3333444444


Q ss_pred             HHHH-------hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---CcccHHHHHHcCCCEEEeCCCCChhh
Q 020320          139 EGFK-------TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---STPKVEFVKELGADKVIDYRKTKYED  208 (327)
Q Consensus       139 ~~l~-------~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (327)
                      +++.       ..+.++|++|+|+| +|++|++++|+||.+ |++++++++   +++|+++++++|++.+ +....++.+
T Consensus       156 ~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~-G~~vi~~~~~~~~~~~~~~~~~~Ga~~v-~~~~~~~~~  232 (355)
T cd08230         156 KAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLR-GFEVYVLNRRDPPDPKADIVEELGATYV-NSSKTPVAE  232 (355)
T ss_pred             HHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEe-cCCccchhh
Confidence            4432       12367899999998 699999999999999 888888776   6789999999999874 444433321


Q ss_pred             --hccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCC-CC--ce--------------eeEEeecCHHHHHHHHhH
Q 020320          209 --IEEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPS-HP--RA--------------IYSSLTVSGEILEKLRPF  266 (327)
Q Consensus       209 --~~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~-~~--~~--------------~~~~~~~~~~~~~~~~~l  266 (327)
                        ...++|++||++|+.   ..++.+++++|+++.+|.... ..  ..              +..+.....+++++++++
T Consensus       233 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~  312 (355)
T cd08230         233 VKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAVED  312 (355)
T ss_pred             hhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHHHH
Confidence              225799999999953   678899999999999986442 11  11              111122234678899999


Q ss_pred             HHCCCce----eeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          267 IESGKLK----AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       267 ~~~g~~~----~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +.++.+.    ...+++++|+++|+++||+.+.++.  .|+++.+
T Consensus       313 l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         313 LAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            9988732    2234589999999999999886543  4888864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=4.2e-38  Score=282.66  Aligned_cols=291  Identities=22%  Similarity=0.299  Sum_probs=245.3

Q ss_pred             ceeEEecccCCC-cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            2 QNAWYYEEYGPK-EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         2 ~~~~v~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      ||++++.+++.+ +.+++.++|.|.+.++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            899999888765 4689999999999999999999999999999999877654 33468899999999999999999999


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCc
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g  159 (327)
                      ++||+|+++.          ..|+|++|++++...++++|+++++++++.++..+.++|+++...++.+|++|+|+|++|
T Consensus        81 ~~Gd~V~~~~----------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~g  150 (324)
T cd08292          81 QVGQRVAVAP----------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGG  150 (324)
T ss_pred             CCCCEEEecc----------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEccccc
Confidence            9999999874          258999999999999999999999999999888889999999778999999999999899


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      .+|++++++|+++ |+++++++.++++.+.++++|++++++.++.++...+      +++|++||++|..  ...+++++
T Consensus       151 ~ig~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~  229 (324)
T cd08292         151 AVGKLVAMLAAAR-GINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLG  229 (324)
T ss_pred             HHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhc
Confidence            9999999999999 9999999998888888888999998887765554432      4799999999853  67789999


Q ss_pred             CCCcEEEeeCCCCCCc----------ee-eEEeec-----------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHH
Q 020320          232 DNAPIVDITWPPSHPR----------AI-YSSLTV-----------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIE  289 (327)
Q Consensus       232 ~~g~~v~~g~~~~~~~----------~~-~~~~~~-----------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~  289 (327)
                      ++|+++.+|.......          .. +.....           ..+.++++++++.+|.++++.  .+.|+++++++
T Consensus       230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~~~~~~~  307 (324)
T cd08292         230 EGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPV--EAVFDLGDAAK  307 (324)
T ss_pred             CCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCcc--ccEecHHHHHH
Confidence            9999999975421110          01 111111           134678899999999998643  67899999999


Q ss_pred             HHHHHHhCCCCceEEE
Q 020320          290 AFRYLETGRARGKVVI  305 (327)
Q Consensus       290 a~~~~~~~~~~gk~vv  305 (327)
                      ||+.+.+....+|+++
T Consensus       308 a~~~~~~~~~~~kvvv  323 (324)
T cd08292         308 AAAASMRPGRAGKVLL  323 (324)
T ss_pred             HHHHHHcCCCCceEEe
Confidence            9999988877788876

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=5.1e-38  Score=290.42  Aligned_cols=303  Identities=20%  Similarity=0.230  Sum_probs=233.0

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhh-cCCCC----C--CCCCCcccccccEEEEEeC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRR-QRPLF----P--SDFPAVPGCDMAGIVVAKG   73 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~-~~~~~----~--~~~p~~~G~e~~G~V~~vG   73 (327)
                      +||++++..++.   ++++++|.|.++++||+||+.++++|++|++.+ .+...    .  ..+|.++|||++|+|+++|
T Consensus         2 ~~~a~~~~~~~~---l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG   78 (410)
T cd08238           2 KTKAWRMYGKGD---LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVG   78 (410)
T ss_pred             CcEEEEEEcCCc---eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeC
Confidence            589999988775   999999999999999999999999999999976 44321    1  2468899999999999999


Q ss_pred             CCCC-CCCCCCEEEEecc----cccccC--cCCCCCceeeEEEeecc----ceecCCCCCCHHhhccc-chHH-HHHHHH
Q 020320           74 TSVT-KFNTGDEVYGNIQ----DFNAEG--KLKQLGALAEFIVVEES----LIAKKPKNISFEEAASL-PLAV-QTAIEG  140 (327)
Q Consensus        74 ~~v~-~~~~Gd~V~~~~~----~~~~~~--~~~~~g~~~~~~~v~~~----~~~~~p~~~~~~~aa~~-~~~~-~ta~~~  140 (327)
                      ++++ ++++||||++...    ....|.  +...+|+|+||++++.+    +++++|+++++++++++ +++. .+++++
T Consensus        79 ~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a  158 (410)
T cd08238          79 KKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTA  158 (410)
T ss_pred             CCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhh
Confidence            9998 5999999987532    111121  12246999999999986    68999999999998865 4332 223433


Q ss_pred             H---------HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC---cEEEEeCCcccHHHHHHc--------CCC-EEE
Q 020320          141 F---------KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA---SHVVATTSTPKVEFVKEL--------GAD-KVI  199 (327)
Q Consensus       141 l---------~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~---~~v~~~~~~~~~~~~~~~--------g~~-~v~  199 (327)
                      +         .+.++++|++|+|+|++|++|++++|+|+++ |.   ++++++.+++|++.++++        |++ .++
T Consensus       159 ~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~-G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i  237 (410)
T cd08238         159 NYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHG-PIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYV  237 (410)
T ss_pred             cccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhc-ccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEE
Confidence            2         3477899999999998999999999999997 43   688888999999999987        666 456


Q ss_pred             eCCC-CChhhhc------cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCC-CC---CCc----------eeeEEeec
Q 020320          200 DYRK-TKYEDIE------EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWP-PS---HPR----------AIYSSLTV  255 (327)
Q Consensus       200 ~~~~-~~~~~~~------~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~-~~---~~~----------~~~~~~~~  255 (327)
                      +.+. .++....      +++|++||++|..   ..++.+++++|+++.++.. ..   .+.          .+..+...
T Consensus       238 ~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (410)
T cd08238         238 NPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG  317 (410)
T ss_pred             CCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCC
Confidence            6543 3333321      3799999999743   6788999999988766432 11   111          11112223


Q ss_pred             CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          256 SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       256 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      ...+++++++++++|++++.++.+++|+++|+++||+.+. ++..+|+++.+.
T Consensus       318 ~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~  369 (410)
T cd08238         318 NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ  369 (410)
T ss_pred             CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence            4568999999999999998767789999999999999998 677799999873

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.5e-38  Score=262.32  Aligned_cols=294  Identities=28%  Similarity=0.367  Sum_probs=242.9

Q ss_pred             ceeEEecccCCC-cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            2 QNAWYYEEYGPK-EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         2 ~~~~v~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      .|+++|+.+|++ +++++++.+.|....++|+||.+++.|||+|+..++|.|+ .+.+|.+-|+|++|+|+.+|+++++|
T Consensus        20 ~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgf   99 (354)
T KOG0025|consen   20 SKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGF   99 (354)
T ss_pred             cceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCcc
Confidence            489999999998 7899999999999999999999999999999999999996 35689999999999999999999999


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcCC
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGA  158 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~  158 (327)
                      ++||+|+....         ..|.|++|.+.+++.++++++.++++.||++..+.+|||.+|.. ..+.+||+|+-.||.
T Consensus       100 k~Gd~VIp~~a---------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNgan  170 (354)
T KOG0025|consen  100 KPGDWVIPLSA---------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGAN  170 (354)
T ss_pred             CCCCeEeecCC---------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcc
Confidence            99999999864         57999999999999999999999999999999999999999964 889999999999999


Q ss_pred             chHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEEeCCCCC---hhh---hccCccEEEeCCCCc--hhh
Q 020320          159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVIDYRKTK---YED---IEEKFDVLYDTIGDC--KNS  226 (327)
Q Consensus       159 g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~~~~~~~---~~~---~~~~~d~v~d~~g~~--~~~  226 (327)
                      +++|++++|+||++ |++.|-++++....+.+    +.+||++|+...+..   +..   ...++.+.|||+|+-  ...
T Consensus       171 S~VG~~ViQlaka~-GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~i  249 (354)
T KOG0025|consen  171 SGVGQAVIQLAKAL-GIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEI  249 (354)
T ss_pred             cHHHHHHHHHHHHh-CcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHH
Confidence            99999999999999 99999999877765554    569999998643322   111   124689999999854  677


Q ss_pred             hhhhcCCCcEEEeeCCCCCCce------eeEEeecC-----------------HHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320          227 FVVAKDNAPIVDITWPPSHPRA------IYSSLTVS-----------------GEILEKLRPFIESGKLKAQIDPTGPYK  283 (327)
Q Consensus       227 ~~~l~~~g~~v~~g~~~~~~~~------~~~~~~~~-----------------~~~~~~~~~l~~~g~~~~~~~~~~~~~  283 (327)
                      .+.|.+||.++.+|.....|..      +|..+.+.                 .+.+.++.++++.|++..+.  ....+
T Consensus       250 ar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~  327 (354)
T KOG0025|consen  250 ARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVP  327 (354)
T ss_pred             HHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc--ceeee
Confidence            8999999999999987644432      22211110                 15578899999999998764  45678


Q ss_pred             hhhHHHHHHHHHhCCC-CceEEEEe
Q 020320          284 FKDVIEAFRYLETGRA-RGKVVISA  307 (327)
Q Consensus       284 ~~~i~~a~~~~~~~~~-~gk~vv~~  307 (327)
                      +.+...|++...+... .+|-++.+
T Consensus       328 L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  328 LADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             chhhhHHHHHHHHHhccCCceEEEe
Confidence            8888888876544433 34555544

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.3e-37  Score=280.69  Aligned_cols=298  Identities=22%  Similarity=0.312  Sum_probs=246.1

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++..++..  +++++.|.|.+.+++|+||+.++++|++|+..+.+..+...+|.++|||++|+|+++|++++++++
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~   78 (333)
T cd08296           1 YKAVQVTEPGGP--LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKV   78 (333)
T ss_pred             CeEEEEccCCCC--ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCC
Confidence            899999988532  999999999999999999999999999999998886544456889999999999999999999999


Q ss_pred             CCEEEEec-----c--------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320           82 GDEVYGNI-----Q--------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT  143 (327)
Q Consensus        82 Gd~V~~~~-----~--------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~  143 (327)
                      ||+|++..     +        ..+.|.     +....|++++|+.++..+++++|+++++.+++.++.++.++|+++..
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~  158 (333)
T cd08296          79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN  158 (333)
T ss_pred             CCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh
Confidence            99998631     1        112222     11225899999999999999999999999999899999999999977


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh---ccCccEEEeCC
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDVLYDTI  220 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v~d~~  220 (327)
                      .++.++++|+|+| +|.+|++++++|+++ |++++++++++++++.++++|++++++..+.++...   .+++|+++|+.
T Consensus       159 ~~~~~~~~vlV~g-~g~iG~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~vi~~~  236 (333)
T cd08296         159 SGAKPGDLVAVQG-IGGLGHLAVQYAAKM-GFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLILATA  236 (333)
T ss_pred             cCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEEEECC
Confidence            7899999999999 899999999999999 999888889999999999999999998776555432   25799999998


Q ss_pred             CC---chhhhhhhcCCCcEEEeeCCCCC-Cc----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhh
Q 020320          221 GD---CKNSFVVAKDNAPIVDITWPPSH-PR----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKD  286 (327)
Q Consensus       221 g~---~~~~~~~l~~~g~~v~~g~~~~~-~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~  286 (327)
                      |.   ....+++++++|+++.+|..... +.          .+..........+..+++++.++++++.   .+.|++++
T Consensus       237 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~---v~~~~~~~  313 (333)
T cd08296         237 PNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPM---VETFPLEK  313 (333)
T ss_pred             CchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCce---EEEEEHHH
Confidence            63   37788999999999999854311 10          1111112345778899999999988754   35899999


Q ss_pred             HHHHHHHHHhCCCCceEEEE
Q 020320          287 VIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       287 i~~a~~~~~~~~~~gk~vv~  306 (327)
                      +++||+.+.+++..||+|++
T Consensus       314 ~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         314 ANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHCCCCceeEEeC
Confidence            99999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2.2e-37  Score=278.47  Aligned_cols=296  Identities=27%  Similarity=0.352  Sum_probs=249.7

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++.++|.+..+++++++.|.++++||+||+.++++|++|++...+.++...+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            79999999998888899999999999999999999999999999998877765445688899999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g  159 (327)
                      +||+|++...         ..|+|++|+.++.++++++|+++++++++.++..+.++|+++. ...+.+|++++|+|++|
T Consensus        81 ~Gd~V~~~~~---------~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g  151 (327)
T PRK10754         81 VGDRVVYAQS---------ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAG  151 (327)
T ss_pred             CCCEEEECCC---------CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCc
Confidence            9999986531         3589999999999999999999999999988888899999985 57899999999999999


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      .+|++++++++.+ |++++.++.++++.+.++++|++++++.+..++...+      +++|+++|++|..  ...+.+++
T Consensus       152 ~ig~~~~~lak~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~  230 (327)
T PRK10754        152 GVGLIACQWAKAL-GAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQ  230 (327)
T ss_pred             HHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhc
Confidence            9999999999999 9999999999999999999999998877665554422      3699999999853  67889999


Q ss_pred             CCCcEEEeeCCCCC----Ccee------eEE--e-----ecC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHH
Q 020320          232 DNAPIVDITWPPSH----PRAI------YSS--L-----TVS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEA  290 (327)
Q Consensus       232 ~~g~~v~~g~~~~~----~~~~------~~~--~-----~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a  290 (327)
                      ++|+++.+|.....    ....      ...  .     ...    .+.++.+++++.+|.+++....++.|++++++++
T Consensus       231 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a  310 (327)
T PRK10754        231 RRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRA  310 (327)
T ss_pred             cCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHH
Confidence            99999999754311    0000      100  0     011    2345678999999999876555789999999999


Q ss_pred             HHHHHhCCCCceEEEE
Q 020320          291 FRYLETGRARGKVVIS  306 (327)
Q Consensus       291 ~~~~~~~~~~gk~vv~  306 (327)
                      ++.+.++...+|+|+.
T Consensus       311 ~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        311 HEILESRATQGSSLLI  326 (327)
T ss_pred             HHHHHcCCCcceEEEe
Confidence            9999999888999985

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=1.2e-37  Score=283.98  Aligned_cols=300  Identities=26%  Similarity=0.322  Sum_probs=240.7

Q ss_pred             eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCC----
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTK----   78 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~----   78 (327)
                      |++++.++++  .+++++.+.|.++++||+||+.++++|++|+....|.++...+|.++|||++|+|+++|+++++    
T Consensus         2 ka~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~   79 (361)
T cd08231           2 RAAVLTGPGK--PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAG   79 (361)
T ss_pred             eEEEEcCCCC--CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccC
Confidence            7899998883  4999999999999999999999999999999998886543567889999999999999999986    


Q ss_pred             --CCCCCEEEEec----cc--------ccccCc------------CCCCCceeeEEEeecc-ceecCCCCCCHHhhcccc
Q 020320           79 --FNTGDEVYGNI----QD--------FNAEGK------------LKQLGALAEFIVVEES-LIAKKPKNISFEEAASLP  131 (327)
Q Consensus        79 --~~~Gd~V~~~~----~~--------~~~~~~------------~~~~g~~~~~~~v~~~-~~~~~p~~~~~~~aa~~~  131 (327)
                        +++||+|+++.    ..        .+.|..            ....|+|++|++++++ +++++|++++...++.++
T Consensus        80 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~  159 (361)
T cd08231          80 EPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPAN  159 (361)
T ss_pred             CccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhc
Confidence              99999999872    11        112210            1236899999999986 899999999999999888


Q ss_pred             hHHHHHHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChh--
Q 020320          132 LAVQTAIEGFKTA-GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYE--  207 (327)
Q Consensus       132 ~~~~ta~~~l~~~-~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--  207 (327)
                      .++.|||+++... ..+++++|||+| +|.+|++++++|+++ |+ +++++++++++.++++++|++.+++.+.....  
T Consensus       160 ~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  237 (361)
T cd08231         160 CALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLA-GARRVIVIDGSPERLELAREFGADATIDIDELPDPQR  237 (361)
T ss_pred             CHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHH
Confidence            9999999999764 445999999998 799999999999999 88 78878888999999999999998876654322  


Q ss_pred             -----hhc--cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCC---C----------ceeeEEeecCHHHHHHHH
Q 020320          208 -----DIE--EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSH---P----------RAIYSSLTVSGEILEKLR  264 (327)
Q Consensus       208 -----~~~--~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~---~----------~~~~~~~~~~~~~~~~~~  264 (327)
                           ...  +++|++||++|.   ...++++++++|+++.+|.....   .          ..+........+.+++++
T Consensus       238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (361)
T cd08231         238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAV  317 (361)
T ss_pred             HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHH
Confidence                 111  479999999975   36788999999999999754211   0          011111223456789999


Q ss_pred             hHHHCC--CceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          265 PFIESG--KLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       265 ~l~~~g--~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +++.++  ++...++++++|+++++++||+.+.++.. +|+++.+
T Consensus       318 ~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         318 RFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             HHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence            999988  55555556789999999999999987764 7998864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-37  Score=276.53  Aligned_cols=291  Identities=22%  Similarity=0.280  Sum_probs=229.1

Q ss_pred             ceeEEeccc--CC--CcceEEeec---cCC-CCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccc--cccEEEEE
Q 020320            2 QNAWYYEEY--GP--KEVLKLGDF---PLP-TPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGC--DMAGIVVA   71 (327)
Q Consensus         2 ~~~~v~~~~--~~--~~~l~~~~~---~~p-~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~--e~~G~V~~   71 (327)
                      .|.|++.++  |.  ++.+++.+.   +.| ++++||||||+.++++||.|+..+.+.......|.++|+  |++|+|..
T Consensus         9 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~   88 (348)
T PLN03154          9 NKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKV   88 (348)
T ss_pred             ceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEE
Confidence            467777433  22  245888873   555 458999999999999999998654332222235788998  88999999


Q ss_pred             eCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccc--ee--cCCCCCCHH-hhcccchHHHHHHHHHH-hcC
Q 020320           72 KGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESL--IA--KKPKNISFE-EAASLPLAVQTAIEGFK-TAG  145 (327)
Q Consensus        72 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~--~~--~~p~~~~~~-~aa~~~~~~~ta~~~l~-~~~  145 (327)
                      +|++++++++||+|+++             |+|++|..++...  ++  ++|++++++ +++.++++++|||+++. ..+
T Consensus        89 vg~~v~~~~~Gd~V~~~-------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~  155 (348)
T PLN03154         89 VDSDDPNFKPGDLISGI-------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCS  155 (348)
T ss_pred             EecCCCCCCCCCEEEec-------------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcC
Confidence            99999999999999864             5799999998753  54  458999986 67788999999999995 588


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCC-Chhhhc-----cCccEEEe
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKT-KYEDIE-----EKFDVLYD  218 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~-----~~~d~v~d  218 (327)
                      +++|++|+|+|++|++|++++|+||++ |++++++++++++.++++ ++|+++++++++. ++.+..     +++|++||
T Consensus       156 ~~~g~~VlV~GaaG~vG~~aiqlAk~~-G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d  234 (348)
T PLN03154        156 PKKGDSVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFD  234 (348)
T ss_pred             CCCCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEE
Confidence            999999999998899999999999999 999888888999999887 7999999987643 444322     37999999


Q ss_pred             CCCCc--hhhhhhhcCCCcEEEeeCCCCCCc-------e----------eeEEeec-----CHHHHHHHHhHHHCCCcee
Q 020320          219 TIGDC--KNSFVVAKDNAPIVDITWPPSHPR-------A----------IYSSLTV-----SGEILEKLRPFIESGKLKA  274 (327)
Q Consensus       219 ~~g~~--~~~~~~l~~~g~~v~~g~~~~~~~-------~----------~~~~~~~-----~~~~~~~~~~l~~~g~~~~  274 (327)
                      ++|..  ..++.+++++|+++.+|.....+.       .          +......     ..+.++++++++++|++++
T Consensus       235 ~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~  314 (348)
T PLN03154        235 NVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY  314 (348)
T ss_pred             CCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence            99853  678899999999999985431110       0          0111100     1345788999999999986


Q ss_pred             eeCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          275 QIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       275 ~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      ..  ..+|+|+++++|++.+.+++..||+|+++.
T Consensus       315 ~~--~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~  346 (348)
T PLN03154        315 IE--DMSEGLESAPAALVGLFSGKNVGKQVIRVA  346 (348)
T ss_pred             ce--ecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence            52  468999999999999999999999999983

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=5.1e-37  Score=277.50  Aligned_cols=301  Identities=21%  Similarity=0.272  Sum_probs=240.2

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||+++++.++.   ++++++|.|.+++++|+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~---~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   77 (339)
T PRK10083          1 MKSIVIEKPNS---LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARI   77 (339)
T ss_pred             CeEEEEecCCe---eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCC
Confidence            89999988664   999999999999999999999999999999998876654457899999999999999999999999


Q ss_pred             CCEEEEecc------------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320           82 GDEVYGNIQ------------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA  144 (327)
Q Consensus        82 Gd~V~~~~~------------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~  144 (327)
                      ||+|+....            ..+.|.     .....|+|++|++++..+++++|++++++.++ +...+.++|+++...
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~~~~  156 (339)
T PRK10083         78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVTGRT  156 (339)
T ss_pred             CCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHHHhc
Confidence            999985321            111121     11236899999999999999999999998876 445667788777788


Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHh-hcCCcEE-EEeCCcccHHHHHHcCCCEEEeCCCCChhhhc--c--CccEEEe
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKH-FYGASHV-VATTSTPKVEFVKELGADKVIDYRKTKYEDIE--E--KFDVLYD  218 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~-~~g~~~v-~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~--~--~~d~v~d  218 (327)
                      ++++|++|+|+| +|.+|++++++|++ + |++++ ++.+++++.++++++|++++++.++..+.+.+  .  ++|++||
T Consensus       157 ~~~~g~~vlI~g-~g~vG~~~~~~a~~~~-G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid  234 (339)
T PRK10083        157 GPTEQDVALIYG-AGPVGLTIVQVLKGVY-NVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTLIID  234 (339)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHhC-CCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCEEEE
Confidence            999999999999 89999999999996 5 88645 45578889999999999999987765555443  2  3579999


Q ss_pred             CCCC---chhhhhhhcCCCcEEEeeCCCCCCc---------ee-eEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchh
Q 020320          219 TIGD---CKNSFVVAKDNAPIVDITWPPSHPR---------AI-YSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFK  285 (327)
Q Consensus       219 ~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~---------~~-~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~  285 (327)
                      ++|.   ...++++++++|+++.+|.......         .+ ........+.+++++++++++++++..++++.|+++
T Consensus       235 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~  314 (339)
T PRK10083        235 AACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFDFQ  314 (339)
T ss_pred             CCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeeecHH
Confidence            9984   3778899999999999985432110         00 001112457789999999999998743457889999


Q ss_pred             hHHHHHHHHHhCC-CCceEEEEeC
Q 020320          286 DVIEAFRYLETGR-ARGKVVISAF  308 (327)
Q Consensus       286 ~i~~a~~~~~~~~-~~gk~vv~~~  308 (327)
                      ++++|++.+.++. ..+|+++.+.
T Consensus       315 ~~~~a~~~~~~~~~~~~kvvv~~~  338 (339)
T PRK10083        315 HVADAIELFEKDQRHCCKVLLTFA  338 (339)
T ss_pred             HHHHHHHHHhcCCCceEEEEEecC
Confidence            9999999997653 5589998775

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.1e-36  Score=276.63  Aligned_cols=301  Identities=23%  Similarity=0.286  Sum_probs=242.9

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++.+++.   +++.+.+.|.+.++||+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|++++++++
T Consensus         1 mka~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~   77 (351)
T cd08285           1 MKAFAMLGIGK---VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKP   77 (351)
T ss_pred             CceEEEccCCc---cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCC
Confidence            89999998875   889999999999999999999999999999988776544456889999999999999999999999


Q ss_pred             CCEEEEecc------------cccccCc--------CCCCCceeeEEEeec--cceecCCCCCCHHhhcccchHHHHHHH
Q 020320           82 GDEVYGNIQ------------DFNAEGK--------LKQLGALAEFIVVEE--SLIAKKPKNISFEEAASLPLAVQTAIE  139 (327)
Q Consensus        82 Gd~V~~~~~------------~~~~~~~--------~~~~g~~~~~~~v~~--~~~~~~p~~~~~~~aa~~~~~~~ta~~  139 (327)
                      ||+|++...            .++.|.+        ....|+|++|+.++.  ..++++|+++++++++.++..+.++|+
T Consensus        78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~  157 (351)
T cd08285          78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFH  157 (351)
T ss_pred             CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHH
Confidence            999997431            1112221        124689999999986  489999999999999999888999999


Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cC
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EK  212 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~  212 (327)
                      ++....++++++|+|+| +|++|++++++|+.+ |.. ++++.+++++.++++++|++++++.+..++....      ++
T Consensus       158 ~~~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~  235 (351)
T cd08285         158 GAELANIKLGDTVAVFG-IGPVGLMAVAGARLR-GAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKG  235 (351)
T ss_pred             HHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCCC
Confidence            98788999999999997 799999999999999 885 6666678889999999999999987665554322      46


Q ss_pred             ccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCC-c--e------------eeEEee-cCHHHHHHHHhHHHCCCce
Q 020320          213 FDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHP-R--A------------IYSSLT-VSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       213 ~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~-~--~------------~~~~~~-~~~~~~~~~~~l~~~g~~~  273 (327)
                      +|+++|++|..   ..++.+++++|+++.+|...... .  .            +..... ...+.++++++++++|+++
T Consensus       236 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i~  315 (351)
T cd08285         236 VDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVD  315 (351)
T ss_pred             CcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCCCC
Confidence            99999999853   67889999999999987543211 0  0            000111 1246789999999999998


Q ss_pred             eee-CCCcccchhhHHHHHHHHHhCCC-CceEEEEe
Q 020320          274 AQI-DPTGPYKFKDVIEAFRYLETGRA-RGKVVISA  307 (327)
Q Consensus       274 ~~~-~~~~~~~~~~i~~a~~~~~~~~~-~gk~vv~~  307 (327)
                      +.. ...+.|+++++++|++.+.+++. ..|+++.+
T Consensus       316 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         316 PSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             hhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            732 23456999999999999988874 57998864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=9e-37  Score=276.52  Aligned_cols=279  Identities=23%  Similarity=0.317  Sum_probs=221.3

Q ss_pred             cceEEeeccCCCCC-CCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEec
Q 020320           14 EVLKLGDFPLPTPQ-HDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNI   89 (327)
Q Consensus        14 ~~l~~~~~~~p~~~-~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~   89 (327)
                      +.+++.+.|.|.+. +|||||||.+++||+.|+.......   ....+|.++|||++|+|+++|++++++++||+|+++.
T Consensus        21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  100 (345)
T cd08293          21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN  100 (345)
T ss_pred             cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC
Confidence            67999999999874 9999999999999999964332111   1234678899999999999999999999999998752


Q ss_pred             ccccccCcCCCCCceeeEEEeeccceecCCCCCCHHh----hcccchHHHHHHHHHH-hcCCCCC--CEEEEEcCCchHH
Q 020320           90 QDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEE----AASLPLAVQTAIEGFK-TAGFKTG--QTIFIVGGAGGVG  162 (327)
Q Consensus        90 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~----aa~~~~~~~ta~~~l~-~~~~~~~--~~vlI~ga~g~~G  162 (327)
                                  +.|++|+++++++++++|+++++.+    ++.++.++.|||+++. .++++++  ++|||+|++|++|
T Consensus       101 ------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG  168 (345)
T cd08293         101 ------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACG  168 (345)
T ss_pred             ------------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHH
Confidence                        5799999999999999999864332    4456778899999984 5778776  9999999899999


Q ss_pred             HHHHHHHHhhcCC-cEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--hhhhhhhcCC
Q 020320          163 TLVIQLAKHFYGA-SHVVATTSTPKVEFVKE-LGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--KNSFVVAKDN  233 (327)
Q Consensus       163 ~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--~~~~~~l~~~  233 (327)
                      ++++|+|+++ |+ +++++++++++.+.+++ +|+++++++++.++.+.+     +++|++||++|+.  ..++.+++++
T Consensus       169 ~~aiqlAk~~-G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~  247 (345)
T cd08293         169 SLAGQIGRLL-GCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNEN  247 (345)
T ss_pred             HHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccC
Confidence            9999999999 88 68888889899888876 999999988776655432     4799999999853  6788999999


Q ss_pred             CcEEEeeCCCC--------C-----------CceeeE-Eee--cC----HHHHHHHHhHHHCCCceeeeCCCcccchhhH
Q 020320          234 APIVDITWPPS--------H-----------PRAIYS-SLT--VS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDV  287 (327)
Q Consensus       234 g~~v~~g~~~~--------~-----------~~~~~~-~~~--~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i  287 (327)
                      |+++.+|....        .           ...... ...  ..    .+.++++++++++|++++..  ...++++++
T Consensus       248 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~l~~~  325 (345)
T cd08293         248 SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKE--TVYEGLENA  325 (345)
T ss_pred             CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCcccee--EEeecHHHH
Confidence            99999873210        0           001111 111  11    24577888999999998653  345699999


Q ss_pred             HHHHHHHHhCCCCceEEEEe
Q 020320          288 IEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       288 ~~a~~~~~~~~~~gk~vv~~  307 (327)
                      ++||+.+.+++..||+|+++
T Consensus       326 ~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         326 GEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHHhcCCCCCeEEEEC
Confidence            99999999998889999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.3e-36  Score=274.62  Aligned_cols=289  Identities=25%  Similarity=0.286  Sum_probs=230.7

Q ss_pred             ceeEEecccCCCcceEEeeccC----CCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccc--cEEEEEeCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPL----PTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDM--AGIVVAKGT   74 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~----p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~--~G~V~~vG~   74 (327)
                      +|+|....++ ++.|++.+.+.    |+|++|||||||.++++||.|+....|.++. ..+|.++|++.  .|.+..+|+
T Consensus         8 ~~~~~~~~~~-~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~   86 (338)
T cd08295           8 LKAYVTGFPK-ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS   86 (338)
T ss_pred             EecCCCCCCC-ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence            3455543333 36799999877    8899999999999999999999988775432 34678889864  466667889


Q ss_pred             CCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeec-cceecCC-CCCCHH-hhcccchHHHHHHHHHH-hcCCCCCC
Q 020320           75 SVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEE-SLIAKKP-KNISFE-EAASLPLAVQTAIEGFK-TAGFKTGQ  150 (327)
Q Consensus        75 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~~p-~~~~~~-~aa~~~~~~~ta~~~l~-~~~~~~~~  150 (327)
                      +++++++||+|+++             |+|+||+++++ ++++++| +++++. +++.+++++.|||+++. ..++++|+
T Consensus        87 ~v~~~~vGd~V~~~-------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~  153 (338)
T cd08295          87 GNPDFKVGDLVWGF-------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGE  153 (338)
T ss_pred             CCCCCCCCCEEEec-------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCC
Confidence            99999999999864             58999999999 8999995 578876 78888999999999995 58899999


Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEEeCCC-CChhhhc-----cCccEEEeCCCCc
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVIDYRK-TKYEDIE-----EKFDVLYDTIGDC  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~~~~~-~~~~~~~-----~~~d~v~d~~g~~  223 (327)
                      +|+|+|++|++|++++|+||.+ |++++++++++++.+.+++ +|+++++++.. .++.+.+     .++|++||++|+.
T Consensus       154 ~VlI~Ga~G~vG~~aiqlAk~~-G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~  232 (338)
T cd08295         154 TVFVSAASGAVGQLVGQLAKLK-GCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGK  232 (338)
T ss_pred             EEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHH
Confidence            9999998999999999999999 9998888899999999988 99999998643 3444322     4799999999853


Q ss_pred             --hhhhhhhcCCCcEEEeeCCCCCCc-----------------eeeEEeec-----CHHHHHHHHhHHHCCCceeeeCCC
Q 020320          224 --KNSFVVAKDNAPIVDITWPPSHPR-----------------AIYSSLTV-----SGEILEKLRPFIESGKLKAQIDPT  279 (327)
Q Consensus       224 --~~~~~~l~~~g~~v~~g~~~~~~~-----------------~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~~~~~  279 (327)
                        ...+.+++++|+++.+|.......                 .+......     ..+.++++++++.+|++++..  .
T Consensus       233 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~  310 (338)
T cd08295         233 MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVE--D  310 (338)
T ss_pred             HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEcee--e
Confidence              678899999999999875321100                 00110110     124578899999999998753  3


Q ss_pred             cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          280 GPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      ..|+++++++|++.+.+++..||+|+++
T Consensus       311 ~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         311 IADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             cccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            5699999999999999998889999864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.1e-36  Score=273.99  Aligned_cols=285  Identities=22%  Similarity=0.307  Sum_probs=230.6

Q ss_pred             CceeEEeccc--CCC--cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCC
Q 020320            1 MQNAWYYEEY--GPK--EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSV   76 (327)
Q Consensus         1 ~~~~~v~~~~--~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   76 (327)
                      |||+|++..+  +.+  +.+++.+.|.|.|++|||+|||.+++||+.|......   ...+|.++|+|++|+|++   .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence            7999999993  554  7899999999999999999999999999988653221   124688999999999985   45


Q ss_pred             CCCCCCCEEEEecccccccCcCCCCCceeeEEEeecc---ceecCCCCCCH-----HhhcccchHHHHHHHHH-HhcCCC
Q 020320           77 TKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEES---LIAKKPKNISF-----EEAASLPLAVQTAIEGF-KTAGFK  147 (327)
Q Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~---~~~~~p~~~~~-----~~aa~~~~~~~ta~~~l-~~~~~~  147 (327)
                      +++++||+|+++             ++|++|++++.+   .++++|+++++     ..++.++.+++|||+++ ...+++
T Consensus        76 ~~~~~Gd~V~~~-------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~  142 (329)
T cd08294          76 SKFPVGTIVVAS-------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPK  142 (329)
T ss_pred             CCCCCCCEEEee-------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCC
Confidence            679999999974             478999999999   99999999871     22345688899999998 468899


Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~  222 (327)
                      +|++++|+|++|++|++++|+|+.+ |++++++++++++.++++++|++++++++..++.+.+     +++|++||++|+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~-G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~  221 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIK-GCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGG  221 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCH
Confidence            9999999999999999999999998 9998888899999999999999999988776655432     479999999985


Q ss_pred             c--hhhhhhhcCCCcEEEeeCCCCC--C-----c-----------eeeEEeec-----CHHHHHHHHhHHHCCCceeeeC
Q 020320          223 C--KNSFVVAKDNAPIVDITWPPSH--P-----R-----------AIYSSLTV-----SGEILEKLRPFIESGKLKAQID  277 (327)
Q Consensus       223 ~--~~~~~~l~~~g~~v~~g~~~~~--~-----~-----------~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~~~  277 (327)
                      .  ...+.+++++|+++.+|.....  +     .           .+......     ..+.++++++++++|++++.. 
T Consensus       222 ~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~-  300 (329)
T cd08294         222 EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYRE-  300 (329)
T ss_pred             HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCc-
Confidence            3  6788999999999988742110  0     0           00010100     123467889999999998753 


Q ss_pred             CCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          278 PTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       278 ~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                       ...|+++++++|++.+.+++..||+++++
T Consensus       301 -~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         301 -HVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             -ccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence             45689999999999999999889999863

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=4.3e-36  Score=271.55  Aligned_cols=298  Identities=26%  Similarity=0.346  Sum_probs=244.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      ||++++.+++++  +.+.+.+.|.+.+++|+||+.++++|++|+....+.++   ...+|.++|||++|+|+++|+++.+
T Consensus         1 ~ka~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~   78 (340)
T cd05284           1 MKAARLYEYGKP--LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG   78 (340)
T ss_pred             CeeeEeccCCCC--ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence            899999988643  88999999999999999999999999999998877653   3456789999999999999999999


Q ss_pred             CCCCCEEEEeccc------------cccc-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320           79 FNTGDEVYGNIQD------------FNAE-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF  141 (327)
Q Consensus        79 ~~~Gd~V~~~~~~------------~~~~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  141 (327)
                      +++||+|+++...            .+.|     -+.+..|+|++|+.++.++++++|+++++++++.++..+.|||+++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l  158 (340)
T cd05284          79 LKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV  158 (340)
T ss_pred             CcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence            9999999987421            0111     0123468999999999999999999999999999999999999999


Q ss_pred             Hh--cCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cC
Q 020320          142 KT--AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EK  212 (327)
Q Consensus       142 ~~--~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~  212 (327)
                      ..  ..+.++++|+|+| +|.+|++++++|+.+ | .+++.+++++++.+.++++|++++++.+.. +...+      .+
T Consensus       159 ~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~~  235 (340)
T cd05284         159 KKALPYLDPGSTVVVIG-VGGLGHIAVQILRAL-TPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGRG  235 (340)
T ss_pred             HHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCCC
Confidence            64  4688999999999 677999999999999 6 888888888999999999999999887665 43322      36


Q ss_pred             ccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC--------ce--eeEEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320          213 FDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP--------RA--IYSSLTVSGEILEKLRPFIESGKLKAQIDPT  279 (327)
Q Consensus       213 ~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~--------~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~  279 (327)
                      +|+++|++|.   ...++++++++|+++.+|.....+        ..  +........+.+.+++++++++.+++.   .
T Consensus       236 ~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~---~  312 (340)
T cd05284         236 ADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVE---I  312 (340)
T ss_pred             CCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCCccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCcc---e
Confidence            9999999985   267889999999999987543100        11  111112246778999999999998753   4


Q ss_pred             cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          280 GPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +.|+++++++|++.+.+++..+|+++.+
T Consensus       313 ~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         313 TKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            6799999999999999998889998754

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8e-36  Score=270.80  Aligned_cols=302  Identities=26%  Similarity=0.361  Sum_probs=241.3

Q ss_pred             ceeEEecccCCCcceEEee-ccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC--------------------CCCCCCc
Q 020320            2 QNAWYYEEYGPKEVLKLGD-FPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF--------------------PSDFPAV   60 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~-~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~--------------------~~~~p~~   60 (327)
                      ||++++..++.++.+.+.+ .+.|.+.+++|+||+.++++|++|++.+.+.++                    ...+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            8999998887666677765 588888999999999999999999998876542                    2356889


Q ss_pred             ccccccEEEEEeCCCCCCCCCCCEEEEeccc-c------cccC--cCCCCCceeeEEEeeccceecCCCCCCHHhhcccc
Q 020320           61 PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQD-F------NAEG--KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLP  131 (327)
Q Consensus        61 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~------~~~~--~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~  131 (327)
                      +|||++|+|+++|++++++++||+|++.... .      +.|.  +....|++++|++++..+++++|+++++.+++.++
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~  160 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP  160 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence            9999999999999999999999999985310 0      0010  11135899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh--h
Q 020320          132 LAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED--I  209 (327)
Q Consensus       132 ~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--~  209 (327)
                      .++.+||+++...++.++++++|+|++|.+|++++++|+++ |++++.++.++ +++.++++|++.+++........  .
T Consensus       161 ~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~  238 (350)
T cd08274         161 CSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRR-GAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAKA  238 (350)
T ss_pred             cHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHHh
Confidence            99999999998788999999999998899999999999999 99988777665 88888999998666544433222  1


Q ss_pred             --ccCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCCC--Cc----------eeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          210 --EEKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPSH--PR----------AIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       210 --~~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~--~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                        .+++|++||++|..  ..++++++++|+++.+|.....  ..          .+........+.+.++++++.+++++
T Consensus       239 ~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  318 (350)
T cd08274         239 LGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEIR  318 (350)
T ss_pred             hCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHHHCCCcc
Confidence              14799999999843  7789999999999988743211  00          11111222357899999999999987


Q ss_pred             eeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          274 AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       274 ~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +.  +++.|++++++++|+.+..+...+|+++.+
T Consensus       319 ~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         319 PV--VAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             cc--cccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            53  578899999999999998888888988753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=5.9e-36  Score=269.00  Aligned_cols=273  Identities=21%  Similarity=0.303  Sum_probs=222.2

Q ss_pred             CCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccc
Q 020320           12 PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQD   91 (327)
Q Consensus        12 ~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   91 (327)
                      .++.+++.+.|.|.+++|||||||.++++|+.|+.   +.++....|.++|.|++|+|+++|+   ++++||+|+++   
T Consensus        15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~---   85 (325)
T TIGR02825        15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS---   85 (325)
T ss_pred             CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe---
Confidence            44679999999999999999999999999997664   3332223478999999999999874   59999999985   


Q ss_pred             ccccCcCCCCCceeeEEEeeccceecC----CCCCCHHhh-cccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHH
Q 020320           92 FNAEGKLKQLGALAEFIVVEESLIAKK----PKNISFEEA-ASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLV  165 (327)
Q Consensus        92 ~~~~~~~~~~g~~~~~~~v~~~~~~~~----p~~~~~~~a-a~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a  165 (327)
                                ++|++|++++.++++++    |++++++++ +.+++++.|||+++ +.+++++|++|||+|++|++|+++
T Consensus        86 ----------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~a  155 (325)
T TIGR02825        86 ----------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVV  155 (325)
T ss_pred             ----------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHH
Confidence                      36899999998888777    899999987 67889999999998 578899999999999999999999


Q ss_pred             HHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCC-Chhhhc-----cCccEEEeCCCCc--hhhhhhhcCCCcEE
Q 020320          166 IQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKT-KYEDIE-----EKFDVLYDTIGDC--KNSFVVAKDNAPIV  237 (327)
Q Consensus       166 ~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~-----~~~d~v~d~~g~~--~~~~~~l~~~g~~v  237 (327)
                      +|+||.+ |++++++++++++.+.++++|+++++++++. .+.+..     +++|++||++|+.  ..++.+++++|+++
T Consensus       156 iqlAk~~-G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv  234 (325)
T TIGR02825       156 GQIAKLK-GCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIA  234 (325)
T ss_pred             HHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEE
Confidence            9999998 9999988899999999999999999987653 333321     4799999999853  77889999999999


Q ss_pred             EeeCCCC------CCc------------eeeEEe--e----cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHH
Q 020320          238 DITWPPS------HPR------------AIYSSL--T----VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRY  293 (327)
Q Consensus       238 ~~g~~~~------~~~------------~~~~~~--~----~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~  293 (327)
                      .+|....      .+.            .+....  .    ...+.++++++++++|++++..  ...|+++++++|++.
T Consensus       235 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~l~~~~~A~~~  312 (325)
T TIGR02825       235 ICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKE--YVIEGFENMPAAFMG  312 (325)
T ss_pred             EecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccce--eccccHHHHHHHHHH
Confidence            9874321      110            000111  0    0134688999999999998753  456899999999999


Q ss_pred             HHhCCCCceEEEE
Q 020320          294 LETGRARGKVVIS  306 (327)
Q Consensus       294 ~~~~~~~gk~vv~  306 (327)
                      +.++...||+|++
T Consensus       313 ~~~~~~~gkvVv~  325 (325)
T TIGR02825       313 MLKGENLGKTIVK  325 (325)
T ss_pred             HhcCCCCCeEEeC
Confidence            9999988999874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=6.1e-36  Score=274.72  Aligned_cols=300  Identities=21%  Similarity=0.250  Sum_probs=240.9

Q ss_pred             ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++..++.   +++.+.|.|.+ ++++|+||+.++++|++|+..+.|.++...+|.++|||++|+|+++|+++++++
T Consensus         1 m~a~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   77 (386)
T cd08283           1 MKALVWHGKGD---VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLK   77 (386)
T ss_pred             CeeEEEecCCC---ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCC
Confidence            89999986544   99999999988 599999999999999999999988775556789999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcC-------------------------CCCCceeeEEEeecc--ceecCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKL-------------------------KQLGALAEFIVVEES--LIAKKPKN  121 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~-------------------------~~~g~~~~~~~v~~~--~~~~~p~~  121 (327)
                      +||+|++...            ..+.|...                         ...|+|++|++++.+  .++++|++
T Consensus        78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~  157 (386)
T cd08283          78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD  157 (386)
T ss_pred             CCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence            9999988531            11122110                         136899999999987  89999999


Q ss_pred             CCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEe
Q 020320          122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      +++++++.++..+.+||+++...++.++++|+|+| +|.+|++++++|+++ |.. +++++.++++.+.+++++...+++
T Consensus       158 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~-g~~~vi~~~~~~~~~~~~~~~~~~~vi~  235 (386)
T cd08283         158 LSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWG-CGPVGLFAARSAKLL-GAERVIAIDRVPERLEMARSHLGAETIN  235 (386)
T ss_pred             CCHHHHhhhccchhhhHHHHhhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCcEEEc
Confidence            99999999999999999999778899999999997 799999999999999 874 777778999999999985446676


Q ss_pred             CCCCC-hhhhc------cCccEEEeCCCC------------------------chhhhhhhcCCCcEEEeeCCCCCCc--
Q 020320          201 YRKTK-YEDIE------EKFDVLYDTIGD------------------------CKNSFVVAKDNAPIVDITWPPSHPR--  247 (327)
Q Consensus       201 ~~~~~-~~~~~------~~~d~v~d~~g~------------------------~~~~~~~l~~~g~~v~~g~~~~~~~--  247 (327)
                      ....+ +.+.+      +++|++||++|.                        ...++++++++|+++.+|.......  
T Consensus       236 ~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~  315 (386)
T cd08283         236 FEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKF  315 (386)
T ss_pred             CCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCcc
Confidence            65543 44332      369999999863                        2567889999999999985432110  


Q ss_pred             e----------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCC-CCceEEEE
Q 020320          248 A----------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGR-ARGKVVIS  306 (327)
Q Consensus       248 ~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~-~~gk~vv~  306 (327)
                      .          +........+.++.++++++++++.+..+.++.|+++++++||+.+.++. ..+|+++.
T Consensus       316 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         316 PIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             CHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence            0          01111123567899999999999987544568899999999999998776 45799885

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.1e-35  Score=268.46  Aligned_cols=294  Identities=32%  Similarity=0.515  Sum_probs=239.6

Q ss_pred             eeEEeccc---CCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 020320            3 NAWYYEEY---GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         3 ~~~v~~~~---~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |++++..+   ++++.+++.++|.|+++++||+||+.++++|++|+..+.+..+...+|.++|+|++|+|+++|++++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF   80 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            68899987   777889999999999999999999999999999998887765545568889999999999999999999


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCC-----CCEEE
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKT-----GQTIF  153 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~-----~~~vl  153 (327)
                      ++||+|+++..       ....|+|++|++++.++++++|+++++++++.+++++.|||+++ ...++.+     +++++
T Consensus        81 ~~Gd~V~~~~~-------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vl  153 (336)
T TIGR02817        81 KPGDEVWYAGD-------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALL  153 (336)
T ss_pred             CCCCEEEEcCC-------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEE
Confidence            99999998631       11358999999999999999999999999999999999999998 4577776     99999


Q ss_pred             EEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCC---chh
Q 020320          154 IVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD---CKN  225 (327)
Q Consensus       154 I~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~---~~~  225 (327)
                      |+|++|.+|++++++|+.++|++++++++++++.+.++++|+++++++.. ++...+     +++|+++|+++.   ...
T Consensus       154 V~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~~~~  232 (336)
T TIGR02817       154 IIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQHFKE  232 (336)
T ss_pred             EEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHHHHH
Confidence            99999999999999999865889999989999999999999999987543 333221     469999999753   377


Q ss_pred             hhhhhcCCCcEEEeeCCCCCC------c--eeeEE-ee----cC-------HHHHHHHHhHHHCCCceeeeCCCccc---
Q 020320          226 SFVVAKDNAPIVDITWPPSHP------R--AIYSS-LT----VS-------GEILEKLRPFIESGKLKAQIDPTGPY---  282 (327)
Q Consensus       226 ~~~~l~~~g~~v~~g~~~~~~------~--~~~~~-~~----~~-------~~~~~~~~~l~~~g~~~~~~~~~~~~---  282 (327)
                      .+.+++++|+++.++......      .  .+... ..    ..       ...++++++++.++.+++.+  ++.+   
T Consensus       233 ~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~--~~~~~~~  310 (336)
T TIGR02817       233 IVELLAPQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTL--AETFGTI  310 (336)
T ss_pred             HHHHhccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccc--hhccCCC
Confidence            889999999999875322111      1  11110 10    00       14578899999999987642  3444   


Q ss_pred             chhhHHHHHHHHHhCCCCceEEEE
Q 020320          283 KFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       283 ~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      +++++++|++.+.+++..+|++++
T Consensus       311 ~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       311 NAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             CHHHHHHHHHHHHcCCccceEEEe
Confidence            579999999999999888898864

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-35  Score=267.45  Aligned_cols=298  Identities=24%  Similarity=0.364  Sum_probs=244.9

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||+++++++++.  +++++.|.|.+.+++++||+.++++|++|++...+.++...+|.++|||++|+|+.+|++++.+++
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   78 (334)
T PRK13771          1 MKAVILPGFKQG--YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKP   78 (334)
T ss_pred             CeeEEEcCCCCC--cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCC
Confidence            899999988864  999999999999999999999999999999988776655566788999999999999999988999


Q ss_pred             CCEEEEecc------------cccccCcC-----CCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320           82 GDEVYGNIQ------------DFNAEGKL-----KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA  144 (327)
Q Consensus        82 Gd~V~~~~~------------~~~~~~~~-----~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~  144 (327)
                      ||+|++...            ..+.|...     ...|+|++|+.++.++++++|+++++.+++.+++.+.++|+++...
T Consensus        79 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~  158 (334)
T PRK13771         79 GDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA  158 (334)
T ss_pred             CCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc
Confidence            999998641            11222111     1268999999999999999999999999999999999999999766


Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh---ccCccEEEeCCC
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDVLYDTIG  221 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v~d~~g  221 (327)
                      .+.++++++|+|++|.+|++++++++.+ |.+++++++++++.+.++++ ++++++.+  .+...   ..++|+++|++|
T Consensus       159 ~~~~~~~vlI~g~~g~~g~~~~~la~~~-g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~~~~d~~ld~~g  234 (334)
T PRK13771        159 GVKKGETVLVTGAGGGVGIHAIQVAKAL-GAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKIGGADIVIETVG  234 (334)
T ss_pred             CCCCCCEEEEECCCccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhcCCCcEEEEcCC
Confidence            8999999999998899999999999999 99999888999998888888 77666544  22221   236899999998


Q ss_pred             Cc--hhhhhhhcCCCcEEEeeCCCCCCc-------------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhh
Q 020320          222 DC--KNSFVVAKDNAPIVDITWPPSHPR-------------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKD  286 (327)
Q Consensus       222 ~~--~~~~~~l~~~g~~v~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~  286 (327)
                      ..  ...+.+++++|+++.+|.......             .+........+.++.++++++++.+++.  +++.|++++
T Consensus       235 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~  312 (334)
T PRK13771        235 TPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPV--IGAEVSLSE  312 (334)
T ss_pred             hHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcce--EeeeEcHHH
Confidence            53  678899999999999985432110             1111122346789999999999998753  468899999


Q ss_pred             HHHHHHHHHhCCCCceEEEEe
Q 020320          287 VIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       287 i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +++||+.+.++...+|+++.+
T Consensus       313 ~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        313 IDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHHHcCCCcceEEEec
Confidence            999999999888888998865

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.6e-35  Score=272.87  Aligned_cols=302  Identities=25%  Similarity=0.363  Sum_probs=239.6

Q ss_pred             CceeEEec--ccCCC-cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC----------CCCCCCcccccccE
Q 020320            1 MQNAWYYE--EYGPK-EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF----------PSDFPAVPGCDMAG   67 (327)
Q Consensus         1 ~~~~~v~~--~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~----------~~~~p~~~G~e~~G   67 (327)
                      |||++++.  +++++ ..+++.+.|.|.++++||+||+.++++|++|++...+...          ....+.++|||++|
T Consensus        12 ~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G   91 (393)
T cd08246          12 KMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASG   91 (393)
T ss_pred             hhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEE
Confidence            68998875  34544 3589999999999999999999999999999988765410          01123578999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEecc------------cccccC------cCCCCCceeeEEEeeccceecCCCCCCHHhhcc
Q 020320           68 IVVAKGTSVTKFNTGDEVYGNIQ------------DFNAEG------KLKQLGALAEFIVVEESLIAKKPKNISFEEAAS  129 (327)
Q Consensus        68 ~V~~vG~~v~~~~~Gd~V~~~~~------------~~~~~~------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~  129 (327)
                      +|+++|++++.+++||+|++.+.            ..+.|.      .....|+|++|++++.++++++|+++++++++.
T Consensus        92 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~  171 (393)
T cd08246          92 IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAA  171 (393)
T ss_pred             EEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhh
Confidence            99999999999999999988642            111121      012358999999999999999999999999998


Q ss_pred             cchHHHHHHHHHHh---cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC-
Q 020320          130 LPLAVQTAIEGFKT---AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK-  205 (327)
Q Consensus       130 ~~~~~~ta~~~l~~---~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-  205 (327)
                      ++..+.|||+++..   ++++++++|+|+|++|++|++++++|+++ |+++++++.++++++.++++|++++++.++.+ 
T Consensus       172 l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~-G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~  250 (393)
T cd08246         172 YMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAA-GANPVAVVSSEEKAEYCRALGAEGVINRRDFDH  250 (393)
T ss_pred             hcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCCEEEccccccc
Confidence            99999999999853   67899999999998899999999999999 99999888999999999999999988764321 


Q ss_pred             ---------------------hhhhc------c-CccEEEeCCCC--chhhhhhhcCCCcEEEeeCCCCCCc--e-----
Q 020320          206 ---------------------YEDIE------E-KFDVLYDTIGD--CKNSFVVAKDNAPIVDITWPPSHPR--A-----  248 (327)
Q Consensus       206 ---------------------~~~~~------~-~~d~v~d~~g~--~~~~~~~l~~~g~~v~~g~~~~~~~--~-----  248 (327)
                                           +.+.+      . ++|+++|++|.  ...++++++++|+++.+|.......  .     
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~  330 (393)
T cd08246         251 WGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLW  330 (393)
T ss_pred             ccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHh
Confidence                                 11211      2 79999999985  3778899999999999875432111  0     


Q ss_pred             -----eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhC-CCCceEEE
Q 020320          249 -----IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETG-RARGKVVI  305 (327)
Q Consensus       249 -----~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~-~~~gk~vv  305 (327)
                           +........+.+.+++++++++.+.+.  .++.|+++++++|++.+.++ ...+|+++
T Consensus       331 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~~gkvvv  391 (393)
T cd08246         331 MRQKRIQGSHFANDREAAEANRLVMKGRIDPC--LSKVFSLDETPDAHQLMHRNQHHVGNMAV  391 (393)
T ss_pred             hheeEEEecccCcHHHHHHHHHHHHcCCceee--eeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence                 011111223578899999999998854  47899999999999999988 67788875

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.1e-35  Score=266.71  Aligned_cols=297  Identities=25%  Similarity=0.326  Sum_probs=244.1

Q ss_pred             eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTG   82 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   82 (327)
                      |+++.++++  +++++++.+.|++.++||+||+.++++|++|++.+.+.+....+|.++|||++|+|+++|++++++++|
T Consensus         1 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (337)
T cd05283           1 KGYAARDAS--GKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVG   78 (337)
T ss_pred             CceEEecCC--CCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCC
Confidence            567777776  459999999999999999999999999999999988876555678899999999999999999999999


Q ss_pred             CEEEEec-------------ccccccC------------cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHH
Q 020320           83 DEVYGNI-------------QDFNAEG------------KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA  137 (327)
Q Consensus        83 d~V~~~~-------------~~~~~~~------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta  137 (327)
                      |+|+...             ...+.|.            +....|+|++|+.++.++++++|+++++++++.+++.+.+|
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta  158 (337)
T cd05283          79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITV  158 (337)
T ss_pred             CEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHH
Confidence            9997321             1122221            11346899999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh-ccCccEE
Q 020320          138 IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI-EEKFDVL  216 (327)
Q Consensus       138 ~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-~~~~d~v  216 (327)
                      |+++....+.++++++|.| +|.+|++++++++.+ |++++++++++++.+.++++|++.+++....++... ..++|++
T Consensus       159 ~~~~~~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~d~v  236 (337)
T cd05283         159 YSPLKRNGVGPGKRVGVVG-IGGLGHLAVKFAKAL-GAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLI  236 (337)
T ss_pred             HHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCCceEE
Confidence            9999877799999999977 899999999999998 998888888888999999999999887655433222 3579999


Q ss_pred             EeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCccc
Q 020320          217 YDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPY  282 (327)
Q Consensus       217 ~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~  282 (327)
                      ||++|.   ...++.+++++|+++.+|......           ..+........+.++.+++++.++++++.   .+.|
T Consensus       237 ~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~  313 (337)
T cd05283         237 IDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPW---VEVI  313 (337)
T ss_pred             EECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccc---eEEE
Confidence            999984   377889999999999998543211           01111222345789999999999998753   4789


Q ss_pred             chhhHHHHHHHHHhCCCCceEEEE
Q 020320          283 KFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       283 ~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      +++++++||+.+.+++..||+|++
T Consensus       314 ~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         314 PMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             EHHHHHHHHHHHHcCCCcceEeeC
Confidence            999999999999999998998874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=6.4e-35  Score=261.94  Aligned_cols=295  Identities=26%  Similarity=0.402  Sum_probs=245.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      ||++++++++.++.+++.+.+.|.+.+++|+||+.++++|++|+....+..+   ...+|.++|||++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            8999998888777788888888888999999999999999999988876542   2346788999999999999999999


Q ss_pred             CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCC
Q 020320           79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGA  158 (327)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~  158 (327)
                      +++||+|++...        ...|+|++|++++.++++++|+++++++++.++..+.++|..+...+++++++++|+|++
T Consensus        81 ~~~Gd~V~~~~~--------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~~  152 (324)
T cd08244          81 AWLGRRVVAHTG--------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAA  152 (324)
T ss_pred             CCCCCEEEEccC--------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            999999998741        125899999999999999999999999999898888999655577889999999999999


Q ss_pred             chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhh
Q 020320          159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVA  230 (327)
Q Consensus       159 g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l  230 (327)
                      |.+|++++++|+.+ |++++.+++++++.+.++++|++++++.++.++.+.+      +++|+++|++|+.  ..++.++
T Consensus       153 ~~~g~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l  231 (324)
T cd08244         153 GGLGSLLVQLAKAA-GATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALL  231 (324)
T ss_pred             chHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHh
Confidence            99999999999999 9999988889999999999999988887765554432      4699999999854  6788999


Q ss_pred             cCCCcEEEeeCCCCCCc----------eee-EEe---ec----CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320          231 KDNAPIVDITWPPSHPR----------AIY-SSL---TV----SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR  292 (327)
Q Consensus       231 ~~~g~~v~~g~~~~~~~----------~~~-~~~---~~----~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~  292 (327)
                      +++|+++.+|.......          ... ...   ..    ..+.++++++++.++.+.+.  +++.|+++++++|++
T Consensus       232 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~  309 (324)
T cd08244         232 APGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPV--VGQTFPLERAAEAHA  309 (324)
T ss_pred             ccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCc--cceEEeHHHHHHHHH
Confidence            99999999975432110          000 111   11    13567888999999998753  578899999999999


Q ss_pred             HHHhCCCCceEEEEe
Q 020320          293 YLETGRARGKVVISA  307 (327)
Q Consensus       293 ~~~~~~~~gk~vv~~  307 (327)
                      .+.++...+|+++.+
T Consensus       310 ~~~~~~~~~kvv~~~  324 (324)
T cd08244         310 ALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHcCCCCceEEEeC
Confidence            999988889998764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=4.2e-35  Score=263.86  Aligned_cols=292  Identities=27%  Similarity=0.406  Sum_probs=242.8

Q ss_pred             CceeEEecccCC--CcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCC
Q 020320            1 MQNAWYYEEYGP--KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         1 ~~~~~v~~~~~~--~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      .||+|++.++++  ++.+++++.+.|.+.+++|+||+.++++|++|++...+.+. ...+|.++|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~   80 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT   80 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence            499999999988  67899999999999999999999999999999998877653 245788999999999999999999


Q ss_pred             CCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEc
Q 020320           78 KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVG  156 (327)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~g  156 (327)
                      ++++||+|+++.           .|+|++|++++.++++++|++  +.+++.++.++.+||+++. ..++.++++++|+|
T Consensus        81 ~~~~Gd~V~~~~-----------~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g  147 (329)
T cd08250          81 DFKVGDAVATMS-----------FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTA  147 (329)
T ss_pred             CCCCCCEEEEec-----------CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEe
Confidence            999999999873           589999999999999999987  3466678889999999985 47899999999999


Q ss_pred             CCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--hhhhhh
Q 020320          157 GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--KNSFVV  229 (327)
Q Consensus       157 a~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--~~~~~~  229 (327)
                      ++|.+|++++++++++ |.+++.+++++++.+.++++|++.+++.....+.+..     +++|+++|++|..  ...+.+
T Consensus       148 a~g~ig~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~  226 (329)
T cd08250         148 AAGGTGQFAVQLAKLA-GCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDN  226 (329)
T ss_pred             CccHHHHHHHHHHHHc-CCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHH
Confidence            9999999999999998 9999988898888999999999888876665443322     4799999999843  678899


Q ss_pred             hcCCCcEEEeeCCCCC--------------Cc-----e-eeEEeec------CHHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320          230 AKDNAPIVDITWPPSH--------------PR-----A-IYSSLTV------SGEILEKLRPFIESGKLKAQIDPTGPYK  283 (327)
Q Consensus       230 l~~~g~~v~~g~~~~~--------------~~-----~-~~~~~~~------~~~~~~~~~~l~~~g~~~~~~~~~~~~~  283 (327)
                      ++++|+++.+|.....              +.     . .+.....      ..+.+.++++++.++.+.+...+++.++
T Consensus       227 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  306 (329)
T cd08250         227 LALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRG  306 (329)
T ss_pred             hccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccC
Confidence            9999999998754311              00     0 0111111      2355788999999999987544567799


Q ss_pred             hhhHHHHHHHHHhCCCCceEEEE
Q 020320          284 FKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       284 ~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      ++++++|++.+.++...+|++++
T Consensus       307 ~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         307 LESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHHHHcCCCCceEEeC
Confidence            99999999999988877888863

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.3e-35  Score=269.49  Aligned_cols=300  Identities=29%  Similarity=0.434  Sum_probs=244.3

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCC---
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTK---   78 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---   78 (327)
                      ||+|++..++..  +.+.+.|.|.+.+++|+||+.++++|++|+....+.++. .+|.++|||++|+|+.+|+++++   
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~   77 (367)
T cd08263           1 MKAAVLKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYG   77 (367)
T ss_pred             CeeEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCc
Confidence            899999988653  888999999999999999999999999999988776543 57889999999999999999988   


Q ss_pred             CCCCCEEEEec------------ccccccCcC---------------------------CCCCceeeEEEeeccceecCC
Q 020320           79 FNTGDEVYGNI------------QDFNAEGKL---------------------------KQLGALAEFIVVEESLIAKKP  119 (327)
Q Consensus        79 ~~~Gd~V~~~~------------~~~~~~~~~---------------------------~~~g~~~~~~~v~~~~~~~~p  119 (327)
                      +++||+|++..            +..+.|.+.                           ...|+|++|+.++.+.++++|
T Consensus        78 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P  157 (367)
T cd08263          78 LSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLP  157 (367)
T ss_pred             CCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECC
Confidence            99999999832            111122111                           136899999999999999999


Q ss_pred             CCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCE
Q 020320          120 KNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADK  197 (327)
Q Consensus       120 ~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~  197 (327)
                      +++++.+++.++..+.|||+++. ...+.++++++|+| +|.+|++++++|+.+ |++ +++++.++++.+.++++|++.
T Consensus       158 ~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~-G~~~vi~~~~s~~~~~~~~~~g~~~  235 (367)
T cd08263         158 ESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAF-GASPIIAVDVRDEKLAKAKELGATH  235 (367)
T ss_pred             CCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCce
Confidence            99999999999999999999985 46778999999996 899999999999998 888 777778888989999999999


Q ss_pred             EEeCCCCChhhhc------cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC---C--------ceee--EEeec
Q 020320          198 VIDYRKTKYEDIE------EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH---P--------RAIY--SSLTV  255 (327)
Q Consensus       198 v~~~~~~~~~~~~------~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~---~--------~~~~--~~~~~  255 (327)
                      +++.+..++...+      +++|+++|++|+.   ...+++++++|+++.++.....   .        ....  .....
T Consensus       236 v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (367)
T cd08263         236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA  315 (367)
T ss_pred             EecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence            9987765554321      4699999999853   6788999999999999754321   0        0011  11111


Q ss_pred             -CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          256 -SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       256 -~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                       ..+.++.+++++.++.+++....++.+++++++++++.+.++...||+|++
T Consensus       316 ~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         316 RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence             146789999999999998754457889999999999999998888899874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.4e-35  Score=268.83  Aligned_cols=300  Identities=23%  Similarity=0.314  Sum_probs=242.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++.+++.   +.+.+.|.|.+ .+++|+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|+++++++
T Consensus         1 ~ka~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   77 (347)
T cd05278           1 MKALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLK   77 (347)
T ss_pred             CceEEEecCCc---eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccC
Confidence            79999988765   89999999999 999999999999999999999888776566788999999999999999999999


Q ss_pred             CCCEEEEecccc------------cccC--------cCCCCCceeeEEEeecc--ceecCCCCCCHHhhcccchHHHHHH
Q 020320           81 TGDEVYGNIQDF------------NAEG--------KLKQLGALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAI  138 (327)
Q Consensus        81 ~Gd~V~~~~~~~------------~~~~--------~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~  138 (327)
                      +||+|++.+...            ..|.        +....|+|++|++++.+  +++++|+++++++++.++.++.|||
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~  157 (347)
T cd05278          78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGF  157 (347)
T ss_pred             CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhee
Confidence            999999843110            0111        11246899999999987  9999999999999999999999999


Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------c
Q 020320          139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------E  211 (327)
Q Consensus       139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~  211 (327)
                      +++...+++++++|+|.| +|.+|++++++|+++ |. +++++.+++++.++++++|++.+++.+..++...+      +
T Consensus       158 ~~~~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~  235 (347)
T cd05278         158 HGAELAGIKPGSTVAVIG-AGPVGLCAVAGARLL-GAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGR  235 (347)
T ss_pred             ehhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCCC
Confidence            998778899999999976 799999999999998 86 66666677888888899999999887765554422      4


Q ss_pred             CccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC---c-------eeeE--EeecCHHHHHHHHhHHHCCCceeee
Q 020320          212 KFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP---R-------AIYS--SLTVSGEILEKLRPFIESGKLKAQI  276 (327)
Q Consensus       212 ~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~---~-------~~~~--~~~~~~~~~~~~~~l~~~g~~~~~~  276 (327)
                      ++|++||++|.   ...++++++++|+++.+|......   .       ....  ......+.++.+++++.++.+++..
T Consensus       236 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  315 (347)
T cd05278         236 GVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSK  315 (347)
T ss_pred             CCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChhH
Confidence            69999999975   267789999999999887443211   0       0010  1111246789999999999998643


Q ss_pred             CCCcccchhhHHHHHHHHHhCCC-CceEEEE
Q 020320          277 DPTGPYKFKDVIEAFRYLETGRA-RGKVVIS  306 (327)
Q Consensus       277 ~~~~~~~~~~i~~a~~~~~~~~~-~gk~vv~  306 (327)
                      .....|++++++++++.+..+.. .+|+++.
T Consensus       316 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         316 LITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             cEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence            34578999999999999887776 6788865

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4.7e-35  Score=264.89  Aligned_cols=301  Identities=27%  Similarity=0.405  Sum_probs=246.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++..++ ...+++.+++.|.+.+++|+||+.++++|++|+..+.+.++ ....|.++|||++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~   79 (341)
T cd08297           1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK   79 (341)
T ss_pred             CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence            8999999887 34599999999999999999999999999999998877653 234467889999999999999999999


Q ss_pred             CCCEEEEecc-------------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH
Q 020320           81 TGDEVYGNIQ-------------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK  142 (327)
Q Consensus        81 ~Gd~V~~~~~-------------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~  142 (327)
                      +||+|++...             ....|.     +....|+|++|+.++.+.++++|+++++.+++.++..+.|||+++.
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~  159 (341)
T cd08297          80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK  159 (341)
T ss_pred             CCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHH
Confidence            9999987520             011110     1123689999999999999999999999999999999999999997


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEE
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVL  216 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v  216 (327)
                      ..+++++++++|+|+++.+|++++++|+++ |.++++++.++++.+.++++|++++++.+..++...+      +++|++
T Consensus       160 ~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~v  238 (341)
T cd08297         160 KAGLKPGDWVVISGAGGGLGHLGVQYAKAM-GLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAV  238 (341)
T ss_pred             hcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCCEE
Confidence            778999999999998888999999999999 9999999999999999999999999887665544321      479999


Q ss_pred             EeCCCC---chhhhhhhcCCCcEEEeeCCCCCC--ce----------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcc
Q 020320          217 YDTIGD---CKNSFVVAKDNAPIVDITWPPSHP--RA----------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGP  281 (327)
Q Consensus       217 ~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~--~~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~  281 (327)
                      +|+.++   ....+++++++|+++.+|......  ..          +........+.+++++++++++.+.++   .+.
T Consensus       239 l~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~  315 (341)
T cd08297         239 VVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPH---IQV  315 (341)
T ss_pred             EEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCcce---eEE
Confidence            997653   367889999999999998543211  10          001111226889999999999998753   367


Q ss_pred             cchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          282 YKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       282 ~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      |++++++++|+.+..+...+|+++++
T Consensus       316 ~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         316 VPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             EcHHHHHHHHHHHHcCCccceEEEeC
Confidence            99999999999999988889999864

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-35  Score=262.88  Aligned_cols=295  Identities=30%  Similarity=0.491  Sum_probs=243.9

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||++++++++..+.+.+.+.+.|++.+++|+||+.++++|+.|+....+.++ ....|.++|||++|+|+++|++++++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            89999999998776788888888889999999999999999999988877542 23346789999999999999999999


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCC
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGA  158 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~  158 (327)
                      ++||+|+++.          ..|+|++|++++.++++++|+++++.+++.++.++.+||+++. ...+.++++++|+|++
T Consensus        81 ~~Gd~V~~~~----------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~  150 (334)
T PTZ00354         81 KEGDRVMALL----------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGA  150 (334)
T ss_pred             CCCCEEEEec----------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            9999999874          2589999999999999999999999999989999999999985 4789999999999999


Q ss_pred             chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC-hhhh------ccCccEEEeCCCC--chhhhhh
Q 020320          159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK-YEDI------EEKFDVLYDTIGD--CKNSFVV  229 (327)
Q Consensus       159 g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~------~~~~d~v~d~~g~--~~~~~~~  229 (327)
                      |.+|++++++|+++ |++++++++++++.+.+.++|++++++....+ +...      .+++|+++|++|+  ...++.+
T Consensus       151 g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~  229 (334)
T PTZ00354        151 SGVGTAAAQLAEKY-GAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEV  229 (334)
T ss_pred             chHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHH
Confidence            99999999999999 99888888999999999999999888765543 3332      1469999999974  3678899


Q ss_pred             hcCCCcEEEeeCCCCCC---c----------eeeEEe-e--cC-------HHHHHHHHhHHHCCCceeeeCCCcccchhh
Q 020320          230 AKDNAPIVDITWPPSHP---R----------AIYSSL-T--VS-------GEILEKLRPFIESGKLKAQIDPTGPYKFKD  286 (327)
Q Consensus       230 l~~~g~~v~~g~~~~~~---~----------~~~~~~-~--~~-------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~  286 (327)
                      ++++|+++.++......   .          .+.... .  ..       .+.++++++++.++.+.+.  +.+.+++++
T Consensus       230 l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~  307 (334)
T PTZ00354        230 LAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLEE  307 (334)
T ss_pred             hccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHH
Confidence            99999999987432111   1          111110 0  00       1345778899999998753  578899999


Q ss_pred             HHHHHHHHHhCCCCceEEEEeC
Q 020320          287 VIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       287 i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      ++++++.+.++...+|+++.+.
T Consensus       308 ~~~~~~~~~~~~~~~kvvv~~~  329 (334)
T PTZ00354        308 VAEAHTFLEQNKNIGKVVLTVN  329 (334)
T ss_pred             HHHHHHHHHhCCCCceEEEecC
Confidence            9999999988887889998763

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.5e-35  Score=267.08  Aligned_cols=301  Identities=25%  Similarity=0.388  Sum_probs=246.7

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||+|++++++.+  +.+++.|.|.+.+++|+||+.++++|++|+....+.++...+|.++|+|++|+|+.+|++++.+++
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~   78 (345)
T cd08260           1 MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRV   78 (345)
T ss_pred             CeeEEEecCCCC--cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCC
Confidence            899999988765  899999999999999999999999999999988887655566889999999999999999999999


Q ss_pred             CCEEEEecc------------cccccCc-----CCCCCceeeEEEeecc--ceecCCCCCCHHhhcccchHHHHHHHHH-
Q 020320           82 GDEVYGNIQ------------DFNAEGK-----LKQLGALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGF-  141 (327)
Q Consensus        82 Gd~V~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l-  141 (327)
                      ||+|++...            ..+.|..     ....|+|++|+.++..  +++++|+++++++++.++..+.+||+++ 
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~  158 (345)
T cd08260          79 GDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALV  158 (345)
T ss_pred             CCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHH
Confidence            999987210            1111111     2236899999999874  9999999999999999998999999998 


Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC-CChhhhc-----cCccE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK-TKYEDIE-----EKFDV  215 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~-----~~~d~  215 (327)
                      ...++.++++++|+| +|.+|++++++|+.+ |.++++++.++++.+.++++|++.+++.++ .++...+     +++|+
T Consensus       159 ~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~d~  236 (345)
T cd08260         159 HQARVKPGEWVAVHG-CGGVGLSAVMIASAL-GARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGGAHV  236 (345)
T ss_pred             HccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCCCCE
Confidence            468899999999999 899999999999999 999999999999999999999999998776 4444322     27999


Q ss_pred             EEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC----c----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCC
Q 020320          216 LYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP----R----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDP  278 (327)
Q Consensus       216 v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~----~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~  278 (327)
                      +||++|+   ....+++++++|+++.+|......    .          .+........+.+++++++++++++.+....
T Consensus       237 vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~  316 (345)
T cd08260         237 SVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDPEPLV  316 (345)
T ss_pred             EEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCChhhhe
Confidence            9999984   267789999999999998543211    0          0111112345778999999999998764345


Q ss_pred             CcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          279 TGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       279 ~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      ++.+++++++++|+.+..+...+|+|++
T Consensus       317 ~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         317 GRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             eEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            6889999999999999998888888863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.5e-35  Score=259.79  Aligned_cols=285  Identities=27%  Similarity=0.381  Sum_probs=236.2

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++.+.+ +..+++++.|.|.+.++||+||+.++++|++|++.....    ..|.++|||++|+|+++|++++.+++
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~   75 (305)
T cd08270           1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAV   75 (305)
T ss_pred             CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCC
Confidence            7999998765 556888899999999999999999999999999876521    23568999999999999999999999


Q ss_pred             CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q 020320           82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGV  161 (327)
Q Consensus        82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~  161 (327)
                      ||+|+++.          ..|+|++|++++.++++++|+++++++++.++..+.+||+++......++++++|+|+.|.+
T Consensus        76 Gd~V~~~~----------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~  145 (305)
T cd08270          76 GARVVGLG----------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGV  145 (305)
T ss_pred             CCEEEEec----------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHH
Confidence            99999874          26899999999999999999999999999999999999999976555569999999988999


Q ss_pred             HHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--hhhhhhhcCCCcEEEe
Q 020320          162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       162 G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~  239 (327)
                      |++++++++.+ |++++.+++++++.+.++++|++.++..... ..  .+++|+++|++|+.  ..++.+++++|+++.+
T Consensus       146 g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~--~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~  221 (305)
T cd08270         146 GRFAVQLAALA-GAHVVAVVGSPARAEGLRELGAAEVVVGGSE-LS--GAPVDLVVDSVGGPQLARALELLAPGGTVVSV  221 (305)
T ss_pred             HHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecccc-cc--CCCceEEEECCCcHHHHHHHHHhcCCCEEEEE
Confidence            99999999998 9999888899999999999998766543221 11  14799999999853  7789999999999999


Q ss_pred             eCCCCCC-------------ceeeEEeec-----CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCc
Q 020320          240 TWPPSHP-------------RAIYSSLTV-----SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARG  301 (327)
Q Consensus       240 g~~~~~~-------------~~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~g  301 (327)
                      |......             .........     ..+.+..++++++++++.+.  +.+.+++++++++++.+.++...+
T Consensus       222 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~g  299 (305)
T cd08270         222 GSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRG  299 (305)
T ss_pred             eccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCc
Confidence            8533110             000011111     14668889999999999864  468999999999999999888889


Q ss_pred             eEEEEe
Q 020320          302 KVVISA  307 (327)
Q Consensus       302 k~vv~~  307 (327)
                      |+++.+
T Consensus       300 kvvi~~  305 (305)
T cd08270         300 KAVLDV  305 (305)
T ss_pred             eEEEeC
Confidence            998864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2e-35  Score=268.22  Aligned_cols=298  Identities=20%  Similarity=0.282  Sum_probs=236.2

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC--------C-CCCCCcccccccEEEEEe
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF--------P-SDFPAVPGCDMAGIVVAK   72 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~--------~-~~~p~~~G~e~~G~V~~v   72 (327)
                      ||+++++.+++   +++++.+.|++.+++|+||+.++++|++|+..+.|...        . ..+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~---~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v   77 (350)
T cd08256           1 MRAVVCHGPQD---YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL   77 (350)
T ss_pred             CeeEEEecCCc---eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence            89999987765   99999999999999999999999999999988877531        0 146778999999999999


Q ss_pred             CCCCC--CCCCCCEEEEeccc-c-----------cccCc-----C--CCCCceeeEEEeecc-ceecCCCCCCHHhhccc
Q 020320           73 GTSVT--KFNTGDEVYGNIQD-F-----------NAEGK-----L--KQLGALAEFIVVEES-LIAKKPKNISFEEAASL  130 (327)
Q Consensus        73 G~~v~--~~~~Gd~V~~~~~~-~-----------~~~~~-----~--~~~g~~~~~~~v~~~-~~~~~p~~~~~~~aa~~  130 (327)
                      |++++  ++++||+|++.... .           +.|..     .  ...|+|++|+.++++ .++++|++++++.++.+
T Consensus        78 G~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~  157 (350)
T cd08256          78 GEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI  157 (350)
T ss_pred             CCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh
Confidence            99999  89999999874210 0           11110     0  136899999999987 67899999999999887


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcE-EEEeCCcccHHHHHHcCCCEEEeCCCCChhhh
Q 020320          131 PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH-VVATTSTPKVEFVKELGADKVIDYRKTKYEDI  209 (327)
Q Consensus       131 ~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~-v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  209 (327)
                       ..+.++|+++...++.++++|+|.| +|.+|++++++|+++ |+++ +++++++++..+++++|++++++.+...+...
T Consensus       158 -~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  234 (350)
T cd08256         158 -EPLACALHAVDRANIKFDDVVVLAG-AGPLGLGMIGAARLK-NPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEK  234 (350)
T ss_pred             -hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHH
Confidence             7888999998778999999999955 899999999999999 8765 45557888889999999999888766554432


Q ss_pred             c------cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCCc-eee----------EEeecCHHHHHHHHhHHHC
Q 020320          210 E------EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHPR-AIY----------SSLTVSGEILEKLRPFIES  269 (327)
Q Consensus       210 ~------~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~-~~~----------~~~~~~~~~~~~~~~l~~~  269 (327)
                      +      .++|+++|++|.   ...++.+++++|+++.+|....... ...          .........+.++++++++
T Consensus       235 ~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (350)
T cd08256         235 IKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIAS  314 (350)
T ss_pred             HHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHc
Confidence            2      369999999984   3678899999999999875431110 000          0011234568899999999


Q ss_pred             CCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          270 GKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       270 g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      |.+++...+++.|+++++++||+.+.++...+|+++
T Consensus       315 g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         315 GRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             CCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            999864335788999999999999998887788764

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=3.7e-35  Score=267.73  Aligned_cols=298  Identities=26%  Similarity=0.324  Sum_probs=238.0

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++.+++..  +++.+.+.|.+.+++|+||+.++++|++|++...+.++ ..+|.++|||++|+|+++|+++.+++
T Consensus         2 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~   78 (365)
T cd08278           2 KTTAAVVREPGGP--FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLK   78 (365)
T ss_pred             ccEEeeeccCCCc--ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCC
Confidence            7999999987653  88999999999999999999999999999999887654 34688999999999999999999999


Q ss_pred             CCCEEEEeccc-----------ccccCc----------------------------CCCCCceeeEEEeeccceecCCCC
Q 020320           81 TGDEVYGNIQD-----------FNAEGK----------------------------LKQLGALAEFIVVEESLIAKKPKN  121 (327)
Q Consensus        81 ~Gd~V~~~~~~-----------~~~~~~----------------------------~~~~g~~~~~~~v~~~~~~~~p~~  121 (327)
                      +||+|++....           .+.|..                            ....|+|++|++++.++++++|++
T Consensus        79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~  158 (365)
T cd08278          79 PGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD  158 (365)
T ss_pred             CCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence            99999863211           111110                            012489999999999999999999


Q ss_pred             CCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEE
Q 020320          122 ISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVI  199 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~  199 (327)
                      ++++.++.+++++.+||+++ ....++++++|+|+| +|.+|++++++|+++ |++ ++++.+++++.+.++++|++.++
T Consensus       159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~-G~~~v~~~~~~~~k~~~~~~~g~~~~i  236 (365)
T cd08278         159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIA-GCTTIIAVDIVDSRLELAKELGATHVI  236 (365)
T ss_pred             CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCcEEe
Confidence            99999999999999999987 468899999999997 799999999999999 885 66666888899999999999998


Q ss_pred             eCCCCChhhhc-----cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceee-EEee----c
Q 020320          200 DYRKTKYEDIE-----EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIY-SSLT----V  255 (327)
Q Consensus       200 ~~~~~~~~~~~-----~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~-~~~~----~  255 (327)
                      +.+..++...+     .++|+++|++|.   ...++++++++|+++.+|.....+           .... ....    .
T Consensus       237 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (365)
T cd08278         237 NPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSV  316 (365)
T ss_pred             cCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcC
Confidence            87665543322     479999999984   378899999999999998542110           0000 1111    1


Q ss_pred             CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          256 SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       256 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      ..+.+++++++++++++++... ...|+++++++|++.+.++... |+++
T Consensus       317 ~~~~~~~~~~~l~~g~l~~~~~-~~~~~l~~~~~a~~~~~~~~~~-k~~~  364 (365)
T cd08278         317 PQEFIPRLIELYRQGKFPFDKL-VTFYPFEDINQAIADSESGKVI-KPVL  364 (365)
T ss_pred             hHHHHHHHHHHHHcCCCChHHh-eEEecHHHHHHHHHHHHCCCce-EEEE
Confidence            1456788999999999864322 3579999999999998877654 6665

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=4.7e-35  Score=265.78  Aligned_cols=299  Identities=25%  Similarity=0.305  Sum_probs=241.9

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC------------CCCCCCcccccccEEE
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF------------PSDFPAVPGCDMAGIV   69 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~------------~~~~p~~~G~e~~G~V   69 (327)
                      ||++++..++.+  ++++++|.|++.++||+||+.++++|++|+..+.+.++            ...+|.++|||++|+|
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   78 (350)
T cd08240           1 MKAAAVVEPGKP--LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV   78 (350)
T ss_pred             CeeEEeccCCCC--ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence            899999887765  89999999999999999999999999999998877543            2235678999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEeccc------------ccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccch
Q 020320           70 VAKGTSVTKFNTGDEVYGNIQD------------FNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPL  132 (327)
Q Consensus        70 ~~vG~~v~~~~~Gd~V~~~~~~------------~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  132 (327)
                      +++|++++++++||+|+++...            .+.|..     ....|++++|+.++.+.++++|+++++.+++.+++
T Consensus        79 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~  158 (350)
T cd08240          79 VAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLAC  158 (350)
T ss_pred             EeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhc
Confidence            9999999999999999987311            111211     11468999999999999999999999999999999


Q ss_pred             HHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc
Q 020320          133 AVQTAIEGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE  210 (327)
Q Consensus       133 ~~~ta~~~l~~-~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  210 (327)
                      .+.+||+++.. ..+.++++|+|+| +|.+|++++++|+++ |+ +++++..++++.+.++++|++.+++.++..+.+..
T Consensus       159 ~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  236 (350)
T cd08240         159 SGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKAL-GPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRI  236 (350)
T ss_pred             hhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHH
Confidence            99999999965 4456899999996 899999999999999 88 56677788889999999999888877665543321


Q ss_pred             -----cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCC
Q 020320          211 -----EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGK  271 (327)
Q Consensus       211 -----~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~  271 (327)
                           +++|+++|++|.   ...++++++++|+++.+|......           ..+........+.+.+++++++++.
T Consensus       237 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~~  316 (350)
T cd08240         237 IKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAGK  316 (350)
T ss_pred             HHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHcCC
Confidence                 369999999984   377899999999999987543211           1111112233477899999999999


Q ss_pred             ceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          272 LKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       272 ~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      +++.  +...|++++++++|+.+.+++..+|+++.
T Consensus       317 i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         317 LKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             Cccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            8764  35789999999999999988888998874

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=6.5e-35  Score=266.62  Aligned_cols=300  Identities=23%  Similarity=0.300  Sum_probs=235.3

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      +||+.++..++..  +++++.|.|.+.+++|+||+.++++|++|++.+.+.+. ..+|.++|||++|+|+++|++++.++
T Consensus         7 ~~~a~~~~~~~~~--~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~   83 (373)
T cd08299           7 KCKAAVLWEPKKP--FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVK   83 (373)
T ss_pred             eeEEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCC
Confidence            5888888766553  89999999999999999999999999999999888652 35788999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||+|+++..            ..+.|...                          ...|+|++|++++.++++++|+++
T Consensus        84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l  163 (373)
T cd08299          84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA  163 (373)
T ss_pred             CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence            9999987521            12222110                          025899999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      ++++++.+++++.++|+++ ...+++++++|+|+| +|++|++++++|+++ |+ +++++++++++++.++++|++++++
T Consensus       164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~a~~lGa~~~i~  241 (373)
T cd08299         164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAA-GASRIIAVDINKDKFAKAKELGATECIN  241 (373)
T ss_pred             ChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence            9999999999999999987 568899999999997 799999999999999 88 6888888999999999999999887


Q ss_pred             CCCCC--hhhh-----ccCccEEEeCCCCc---hhhhhh-hcCCCcEEEeeCCCCC-Cce-----e-----eEEee----
Q 020320          201 YRKTK--YEDI-----EEKFDVLYDTIGDC---KNSFVV-AKDNAPIVDITWPPSH-PRA-----I-----YSSLT----  254 (327)
Q Consensus       201 ~~~~~--~~~~-----~~~~d~v~d~~g~~---~~~~~~-l~~~g~~v~~g~~~~~-~~~-----~-----~~~~~----  254 (327)
                      ..+.+  +...     .+++|+++|++|..   ..++.. +.++|+++.+|..... +..     +     +....    
T Consensus       242 ~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  321 (373)
T cd08299         242 PQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGW  321 (373)
T ss_pred             ccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCC
Confidence            65432  2221     14799999999853   343443 4679999999854321 100     0     00111    


Q ss_pred             cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          255 VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       255 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      ...+.+.++++.+.++.+++....++.|+++++++||+.+.++.. .|+++.
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~  372 (373)
T cd08299         322 KSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLT  372 (373)
T ss_pred             ccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEe
Confidence            123567778888888877655456789999999999999887665 477664

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.4e-35  Score=265.08  Aligned_cols=298  Identities=23%  Similarity=0.287  Sum_probs=237.3

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-----------CCCCCCcccccccEEEE
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-----------PSDFPAVPGCDMAGIVV   70 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-----------~~~~p~~~G~e~~G~V~   70 (327)
                      ||++++..+    .+++++++.|++++++|+||+.++++|+.|+....+...           ...+|.++|+|++|+|+
T Consensus         1 m~a~~~~~~----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~   76 (341)
T cd08262           1 MRAAVFRDG----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV   76 (341)
T ss_pred             CceEEEeCC----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence            899999765    399999999999999999999999999999988876321           22357889999999999


Q ss_pred             EeCCCCCC-CCCCCEEEEeccc----cccc--CcC-CCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH
Q 020320           71 AKGTSVTK-FNTGDEVYGNIQD----FNAE--GKL-KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK  142 (327)
Q Consensus        71 ~vG~~v~~-~~~Gd~V~~~~~~----~~~~--~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~  142 (327)
                      ++|+++++ +++||+|++++..    ...|  +.. ...|+|++|++++.++++++|+++++++++ ++..+.+||+++.
T Consensus        77 ~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~~  155 (341)
T cd08262          77 DYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAVR  155 (341)
T ss_pred             EeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHHH
Confidence            99999987 9999999987321    1111  100 146899999999999999999999999887 5667789999987


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccHHHHHHcCCCEEEeCCCCChh-------hhc--cC
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFVKELGADKVIDYRKTKYE-------DIE--EK  212 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~-------~~~--~~  212 (327)
                      .++++++++|+|+| +|.+|.+++++|+.+ |++++++ .+++++.++++++|++++++.+..+..       ...  ++
T Consensus       156 ~~~~~~g~~VlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~  233 (341)
T cd08262         156 RARLTPGEVALVIG-CGPIGLAVIAALKAR-GVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPK  233 (341)
T ss_pred             hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCC
Confidence            78999999999997 699999999999999 8875544 467888999999999988886654321       111  46


Q ss_pred             ccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCC
Q 020320          213 FDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDP  278 (327)
Q Consensus       213 ~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~  278 (327)
                      +|+++|++|+.   ...+.+++++|+++.+|......           ..+........+.++++++++++|.+.+...+
T Consensus       234 ~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i  313 (341)
T cd08262         234 PAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAPMV  313 (341)
T ss_pred             CCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHHhe
Confidence            99999999852   66789999999999987542111           11112223445678999999999999865444


Q ss_pred             CcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          279 TGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       279 ~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      ++.+++++++++++.+.++...+|+|++
T Consensus       314 ~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         314 TGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             EEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            6889999999999999999888999864

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=4.7e-35  Score=269.98  Aligned_cols=306  Identities=25%  Similarity=0.372  Sum_probs=243.0

Q ss_pred             CceeEEecc--cCCC-cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC----------CCCCC-Cccccccc
Q 020320            1 MQNAWYYEE--YGPK-EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF----------PSDFP-AVPGCDMA   66 (327)
Q Consensus         1 ~~~~~v~~~--~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~----------~~~~p-~~~G~e~~   66 (327)
                      +||+|++..  ++++ +.+++.++|.|.+.+++|+||+.++++|.+|++...+...          ....| .++|||++
T Consensus         7 ~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~   86 (398)
T TIGR01751         7 TMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDAS   86 (398)
T ss_pred             hhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceE
Confidence            599999965  6665 5799999999999999999999999999999876654320          11123 37899999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEecc------------cccccCc------CCCCCceeeEEEeeccceecCCCCCCHHhhc
Q 020320           67 GIVVAKGTSVTKFNTGDEVYGNIQ------------DFNAEGK------LKQLGALAEFIVVEESLIAKKPKNISFEEAA  128 (327)
Q Consensus        67 G~V~~vG~~v~~~~~Gd~V~~~~~------------~~~~~~~------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa  128 (327)
                      |+|+++|++++.+++||+|++.+.            ..+.|..      ....|+|++|+.++.++++++|+++++++++
T Consensus        87 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa  166 (398)
T TIGR01751        87 GVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAA  166 (398)
T ss_pred             EEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHh
Confidence            999999999999999999998642            0111111      1135899999999999999999999999999


Q ss_pred             ccchHHHHHHHHHH---hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC
Q 020320          129 SLPLAVQTAIEGFK---TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK  205 (327)
Q Consensus       129 ~~~~~~~ta~~~l~---~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~  205 (327)
                      .++..+.+||+++.   ..++.++++++|+|++|.+|++++++|+++ |+++++++.++++.+.++++|++.+++.++.+
T Consensus       167 ~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~-G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~  245 (398)
T TIGR01751       167 CPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAG-GGNPVAVVSSPEKAEYCRELGAEAVIDRNDFG  245 (398)
T ss_pred             hccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCCEEecCCCcc
Confidence            88989999999985   377899999999998899999999999998 99988888888999999999999999865421


Q ss_pred             ----------------------hhhh------ccCccEEEeCCCC--chhhhhhhcCCCcEEEeeCCCCCCce-------
Q 020320          206 ----------------------YEDI------EEKFDVLYDTIGD--CKNSFVVAKDNAPIVDITWPPSHPRA-------  248 (327)
Q Consensus       206 ----------------------~~~~------~~~~d~v~d~~g~--~~~~~~~l~~~g~~v~~g~~~~~~~~-------  248 (327)
                                            +...      .+++|++||++|.  ...++.+++++|+++.+|.....+..       
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  325 (398)
T TIGR01751       246 HWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLW  325 (398)
T ss_pred             hhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHh
Confidence                                  1111      1369999999984  36788999999999999864321110       


Q ss_pred             -----eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320          249 -----IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFP  309 (327)
Q Consensus       249 -----~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~  309 (327)
                           +........+.+++++++++++++.+.  +++++++++++++|+.+.++...+|+|+.+..
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~  389 (398)
T TIGR01751       326 MRQKRIQGSHFANLREAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA  389 (398)
T ss_pred             hcccEEEccccCcHHHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence                 111111122447889999999999854  47899999999999999999999999998753

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=2.2e-35  Score=266.98  Aligned_cols=294  Identities=27%  Similarity=0.354  Sum_probs=240.7

Q ss_pred             ceeEEecccCCC-cceEEeeccCCCCCC-CeEEEEEEEEeeChHhHhhhcCCCCCC-C----CCCcccccccEEEEEeCC
Q 020320            2 QNAWYYEEYGPK-EVLKLGDFPLPTPQH-DQLLVQVRAAALNPIDSKRRQRPLFPS-D----FPAVPGCDMAGIVVAKGT   74 (327)
Q Consensus         2 ~~~~v~~~~~~~-~~l~~~~~~~p~~~~-~eVlV~v~~~~i~~~d~~~~~~~~~~~-~----~p~~~G~e~~G~V~~vG~   74 (327)
                      ||++++..++.+ +.+.+++.|.|.+.+ ++|+||+.++++|++|+..+.+..+.. .    +|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            899999988765 468999999999887 999999999999999999887765321 2    677899999999999999


Q ss_pred             CCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEE
Q 020320           75 SVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIF  153 (327)
Q Consensus        75 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vl  153 (327)
                      ++..+++||+|++...         ..|+|++|+.++.++++++|+++++++++.++..+.|+|+++. ...+.++++|+
T Consensus        81 ~v~~~~~Gd~V~~~~~---------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  151 (341)
T cd08290          81 GVKSLKPGDWVIPLRP---------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVI  151 (341)
T ss_pred             CCCCCCCCCEEEecCC---------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence            9999999999998742         2589999999999999999999999999999999999999985 47889999999


Q ss_pred             EEcCCchHHHHHHHHHHhhcCCcEEEEeCCc----ccHHHHHHcCCCEEEeCCCC---Chhhhc-----cCccEEEeCCC
Q 020320          154 IVGGAGGVGTLVIQLAKHFYGASHVVATTST----PKVEFVKELGADKVIDYRKT---KYEDIE-----EKFDVLYDTIG  221 (327)
Q Consensus       154 I~ga~g~~G~~a~~la~~~~g~~~v~~~~~~----~~~~~~~~~g~~~v~~~~~~---~~~~~~-----~~~d~v~d~~g  221 (327)
                      |+|++|.+|++++++|+++ |.++++++.++    ++.+.++++|++++++.+..   .+...+     +++|+++|++|
T Consensus       152 I~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g  230 (341)
T cd08290         152 QNGANSAVGQAVIQLAKLL-GIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVG  230 (341)
T ss_pred             EccchhHHHHHHHHHHHHc-CCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcC
Confidence            9998899999999999999 99988888765    56788888999999877654   443322     26999999998


Q ss_pred             Cc--hhhhhhhcCCCcEEEeeCCCCCCc----------ee-eEEee-------cC----HHHHHHHHhHHHCCCceeeeC
Q 020320          222 DC--KNSFVVAKDNAPIVDITWPPSHPR----------AI-YSSLT-------VS----GEILEKLRPFIESGKLKAQID  277 (327)
Q Consensus       222 ~~--~~~~~~l~~~g~~v~~g~~~~~~~----------~~-~~~~~-------~~----~~~~~~~~~l~~~g~~~~~~~  277 (327)
                      +.  ...+++++++|+++.+|.....+.          .. +....       ..    ...+..+++++.++.+.+.  
T Consensus       231 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--  308 (341)
T cd08290         231 GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--  308 (341)
T ss_pred             cHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--
Confidence            53  567899999999999874321110          00 01111       11    1257889999999998764  


Q ss_pred             CCccc---chhhHHHHHHHHHhCCCCceEEEEe
Q 020320          278 PTGPY---KFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       278 ~~~~~---~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      ....+   ++++++++++.+.++...+|+++++
T Consensus       309 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         309 PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            34556   9999999999999888889999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=5.8e-35  Score=264.72  Aligned_cols=301  Identities=21%  Similarity=0.248  Sum_probs=240.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++..++.   +++++.|.|++ .++||+||++++++|++|+..+.|.++...+|.++|||++|+|+++|+++++++
T Consensus         1 m~a~~~~~~~~---~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   77 (345)
T cd08286           1 MKALVYHGPGK---ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFK   77 (345)
T ss_pred             CceEEEecCCc---eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccC
Confidence            89999988775   99999999986 899999999999999999999888765445688999999999999999999999


Q ss_pred             CCCEEEEeccc------------ccccC------cCCCCCceeeEEEeecc--ceecCCCCCCHHhhcccchHHHHHHHH
Q 020320           81 TGDEVYGNIQD------------FNAEG------KLKQLGALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEG  140 (327)
Q Consensus        81 ~Gd~V~~~~~~------------~~~~~------~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~  140 (327)
                      +||+|++....            +..|.      +....|+|++|+.++.+  .++++|++++..+++.++..+++||++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  157 (345)
T cd08286          78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYEC  157 (345)
T ss_pred             CCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHH
Confidence            99999986421            01111      11235899999999987  999999999999999999999999997


Q ss_pred             H-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cC
Q 020320          141 F-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EK  212 (327)
Q Consensus       141 l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~  212 (327)
                      + ...++.++++++|.| +|.+|++++++|+.+ | .+++++..++++...++++|++.+++.++.++...+      ++
T Consensus       158 ~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~  235 (345)
T cd08286         158 GVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLY-SPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRG  235 (345)
T ss_pred             HHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCC
Confidence            6 567899999999987 699999999999999 8 677776678888888899999999987765543321      36


Q ss_pred             ccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCC-c--------eee-EEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320          213 FDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHP-R--------AIY-SSLTVSGEILEKLRPFIESGKLKAQIDPT  279 (327)
Q Consensus       213 ~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~-~--------~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~  279 (327)
                      +|+++|++|..   ..++++++++|+++.+|...... .        ... .......+.+..++++++++.+++..+.+
T Consensus       236 ~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  315 (345)
T cd08286         236 VDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKLVT  315 (345)
T ss_pred             CCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHcEE
Confidence            99999999853   56668999999999987533111 0        000 11112236688899999999988654457


Q ss_pred             cccchhhHHHHHHHHHhCC--CCceEEEEe
Q 020320          280 GPYKFKDVIEAFRYLETGR--ARGKVVISA  307 (327)
Q Consensus       280 ~~~~~~~i~~a~~~~~~~~--~~gk~vv~~  307 (327)
                      ++|++++++++++.+.+..  ...|+++++
T Consensus       316 ~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         316 HRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             eEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            8999999999999998764  345888864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.7e-35  Score=261.61  Aligned_cols=298  Identities=29%  Similarity=0.405  Sum_probs=244.5

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++..+++  .+.++++|.|.+.+++|+|++.++++|++|++...+.++...+|.++|||++|+|+.+|++++++++
T Consensus         1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~   78 (332)
T cd08259           1 MKAAILHKPNK--PLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKP   78 (332)
T ss_pred             CeEEEEecCCC--ceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCC
Confidence            89999987433  4999999999999999999999999999999998886655566889999999999999999999999


Q ss_pred             CCEEEEeccc------------ccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320           82 GDEVYGNIQD------------FNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA  144 (327)
Q Consensus        82 Gd~V~~~~~~------------~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~  144 (327)
                      ||+|+++...            .+.|.     +....|+|++|++++..+++++|+++++++++.++.++.+||++++..
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~  158 (332)
T cd08259          79 GDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRA  158 (332)
T ss_pred             CCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHHh
Confidence            9999987411            11111     112368999999999999999999999999999999999999999778


Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh---ccCccEEEeCCC
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDVLYDTIG  221 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v~d~~g  221 (327)
                      .+.++++++|+|++|.+|++++++++.+ |.+++.+++++++.+.+++++.+.+++...  +.+.   ..++|++++++|
T Consensus       159 ~~~~~~~vlI~ga~g~vG~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~v~~~~g  235 (332)
T cd08259         159 GVKKGDTVLVTGAGGGVGIHAIQLAKAL-GARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLGGADVVIELVG  235 (332)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhccCCCEEEECCC
Confidence            8999999999999999999999999999 999988888888888888899888776543  3222   237999999998


Q ss_pred             Cc--hhhhhhhcCCCcEEEeeCCCCCCc------------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhH
Q 020320          222 DC--KNSFVVAKDNAPIVDITWPPSHPR------------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDV  287 (327)
Q Consensus       222 ~~--~~~~~~l~~~g~~v~~g~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i  287 (327)
                      ..  ..++.+++++|+++.++.......            .+........+.++++++++.++.+++.  +++.|+++++
T Consensus       236 ~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~  313 (332)
T cd08259         236 SPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPV--IDRVVSLEDI  313 (332)
T ss_pred             hHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccc--eeEEEcHHHH
Confidence            43  678899999999998875321110            1111222346778999999999998754  4689999999


Q ss_pred             HHHHHHHHhCCCCceEEEE
Q 020320          288 IEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       288 ~~a~~~~~~~~~~gk~vv~  306 (327)
                      ++||+.+.++...+|++++
T Consensus       314 ~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         314 NEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHHcCCcccEEEeC
Confidence            9999999988888898863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=7e-35  Score=263.48  Aligned_cols=298  Identities=34%  Similarity=0.521  Sum_probs=242.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||+++++.++ +..+++.+++.|.++++||+||+.++++|++|++...+.+ ...+|.++|||++|+|+.+|++++.+++
T Consensus         1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~   78 (339)
T cd08249           1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKV   78 (339)
T ss_pred             CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCC
Confidence            8999999986 5569999999999999999999999999999998775543 1235678999999999999999999999


Q ss_pred             CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCC----------CCCC
Q 020320           82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGF----------KTGQ  150 (327)
Q Consensus        82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~----------~~~~  150 (327)
                      ||+|+++...  .|++...+|+|++|++++.+.++++|+++++.+++.++..+.+||+++. ..++          .+++
T Consensus        79 Gd~V~~~~~~--~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~  156 (339)
T cd08249          79 GDRVAGFVHG--GNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGK  156 (339)
T ss_pred             CCEEEEEecc--ccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCC
Confidence            9999997531  1112234689999999999999999999999999999999999999985 3433          7899


Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCC---
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD---  222 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~---  222 (327)
                      +++|+|++|.+|++++++|+++ |++++.++ ++++.+.++++|++++++.+..++.+.+     +++|+++|++|.   
T Consensus       157 ~vlI~ga~g~vg~~~~~~a~~~-G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~  234 (339)
T cd08249         157 PVLIWGGSSSVGTLAIQLAKLA-GYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPES  234 (339)
T ss_pred             EEEEEcChhHHHHHHHHHHHHc-CCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchH
Confidence            9999998899999999999999 99888777 5688999999999999988766554432     469999999885   


Q ss_pred             chhhhhhhcC--CCcEEEeeCCCCCC---ceee--E--Eee----------cCHHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320          223 CKNSFVVAKD--NAPIVDITWPPSHP---RAIY--S--SLT----------VSGEILEKLRPFIESGKLKAQIDPTGPYK  283 (327)
Q Consensus       223 ~~~~~~~l~~--~g~~v~~g~~~~~~---~~~~--~--~~~----------~~~~~~~~~~~l~~~g~~~~~~~~~~~~~  283 (327)
                      ...+++++++  +|+++.++......   ....  .  ...          .....++.++++++++++.+.  +...++
T Consensus       235 ~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~  312 (339)
T cd08249         235 AQLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVE  312 (339)
T ss_pred             HHHHHHHHhccCCCEEEEecCCCccccCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecC
Confidence            2778999999  99999997543211   1111  0  111          112567889999999999864  345666


Q ss_pred             --hhhHHHHHHHHHhCC-CCceEEEEe
Q 020320          284 --FKDVIEAFRYLETGR-ARGKVVISA  307 (327)
Q Consensus       284 --~~~i~~a~~~~~~~~-~~gk~vv~~  307 (327)
                        ++++++||+.+.++. ..+|+|+++
T Consensus       313 ~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         313 GGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             CcHHHHHHHHHHHHCCCccceEEEEeC
Confidence              999999999999888 888999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=1.8e-34  Score=260.69  Aligned_cols=299  Identities=23%  Similarity=0.292  Sum_probs=239.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||+++++++++.  ..+++.|.|++.++||+||+.++++|++|++.+.+.++. ..|.++|||++|+|+++|++++.+++
T Consensus         1 mka~~~~~~~~~--~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~   77 (338)
T PRK09422          1 MKAAVVNKDHTG--DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKV   77 (338)
T ss_pred             CeEEEecCCCCC--ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCC
Confidence            899999988763  228899999999999999999999999999988776532 34678999999999999999999999


Q ss_pred             CCEEEEec-------------ccccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320           82 GDEVYGNI-------------QDFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT  143 (327)
Q Consensus        82 Gd~V~~~~-------------~~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~  143 (327)
                      ||+|++..             ...+.|.     +....|++++|+.++.++++++|+++++.+++.++..+.|||+++..
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~~~  157 (338)
T PRK09422         78 GDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAIKV  157 (338)
T ss_pred             CCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHHHh
Confidence            99998621             1112221     12236899999999999999999999999999999999999999987


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC-CChhhh----ccCccEEE-
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK-TKYEDI----EEKFDVLY-  217 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~----~~~~d~v~-  217 (327)
                      ++++++++|+|+| +|++|++++++|+.+.|++++++++++++++.++++|++.+++.+. .++.+.    ..++|.++ 
T Consensus       158 ~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~  236 (338)
T PRK09422        158 SGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAHAAVV  236 (338)
T ss_pred             cCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCcEEEE
Confidence            8899999999999 7999999999999833889999999999999999999999888754 333322    23688555 


Q ss_pred             eCCCC--chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccch
Q 020320          218 DTIGD--CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKF  284 (327)
Q Consensus       218 d~~g~--~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~  284 (327)
                      ++.+.  ...++++++++|+++.+|......           ..+........+.++.+++++++|.+.+.   ...+++
T Consensus       237 ~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~---v~~~~~  313 (338)
T PRK09422        237 TAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPK---VQLRPL  313 (338)
T ss_pred             eCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCcc---EEEEcH
Confidence            54442  377889999999999987543110           00111111246789999999999998653   346899


Q ss_pred             hhHHHHHHHHHhCCCCceEEEEe
Q 020320          285 KDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       285 ~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      ++++++|+.+.++...+|+++.+
T Consensus       314 ~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        314 EDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             HHHHHHHHHHHcCCccceEEEec
Confidence            99999999999998889999864

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=1.2e-34  Score=262.48  Aligned_cols=297  Identities=29%  Similarity=0.385  Sum_probs=241.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++++++.   +.+.+.+.|++.+++|+||+.++++|++|+....+.++...+|.++|+|++|+|+++|++++.+++
T Consensus         1 ~~~~~~~~~~~---~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~   77 (343)
T cd08235           1 MKAAVLHGPND---VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKV   77 (343)
T ss_pred             CeEEEEecCCc---eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCC
Confidence            79999998875   899999999999999999999999999999988776543345778999999999999999999999


Q ss_pred             CCEEEEeccc------------ccccCc-----CCCCCceeeEEEeeccc-----eecCCCCCCHHhhcccchHHHHHHH
Q 020320           82 GDEVYGNIQD------------FNAEGK-----LKQLGALAEFIVVEESL-----IAKKPKNISFEEAASLPLAVQTAIE  139 (327)
Q Consensus        82 Gd~V~~~~~~------------~~~~~~-----~~~~g~~~~~~~v~~~~-----~~~~p~~~~~~~aa~~~~~~~ta~~  139 (327)
                      ||+|+++...            .+.|..     ....|+|++|+.++.++     ++++|+++++.+++.+ ..+.+||+
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~  156 (343)
T cd08235          78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCIN  156 (343)
T ss_pred             CCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHH
Confidence            9999986320            011111     12468999999999998     9999999999999765 67889999


Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cC
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EK  212 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~  212 (327)
                      ++...++.+|++|+|+| +|.+|++++++|+.+ |.+ ++++.+++++.+.+.++|.+++++.++.++.+.+      ++
T Consensus       157 ~l~~~~~~~g~~VlV~g-~g~vg~~~~~la~~~-g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~  234 (343)
T cd08235         157 AQRKAGIKPGDTVLVIG-AGPIGLLHAMLAKAS-GARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRG  234 (343)
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCcC
Confidence            99777899999999997 799999999999998 998 7777788888888889999998887766554422      35


Q ss_pred             ccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-------------ceeeEEeecCHHHHHHHHhHHHCCCceeee
Q 020320          213 FDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-------------RAIYSSLTVSGEILEKLRPFIESGKLKAQI  276 (327)
Q Consensus       213 ~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~  276 (327)
                      +|+++|+++.   ....+++++++|+++.++......             ..+........+.++.++++++++.+.+..
T Consensus       235 vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~  314 (343)
T cd08235         235 ADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDVKD  314 (343)
T ss_pred             CCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCChHH
Confidence            9999999984   367889999999999987533211             011112223457788999999999987533


Q ss_pred             CCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          277 DPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       277 ~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      .....|++++++++++.+.++. .+|+|+
T Consensus       315 ~~~~~~~~~~~~~a~~~~~~~~-~~k~vi  342 (343)
T cd08235         315 LITHRFPLEDIEEAFELAADGK-SLKIVI  342 (343)
T ss_pred             heeeEeeHHHHHHHHHHHhCCC-cEEEEe
Confidence            3457899999999999999888 888886

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=6.8e-35  Score=265.93  Aligned_cols=298  Identities=25%  Similarity=0.353  Sum_probs=241.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++..++.+  ++++++|.|.+++++|+||+.++++|++|+..+.+.++ ..+|.++|+|++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~   77 (363)
T cd08279           1 MRAAVLHEVGKP--LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKP   77 (363)
T ss_pred             CeEEEEecCCCC--ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCC
Confidence            899999988754  89999999999999999999999999999998887654 456788999999999999999999999


Q ss_pred             CCEEEEecc------------cccccCcC-------------------------CCCCceeeEEEeeccceecCCCCCCH
Q 020320           82 GDEVYGNIQ------------DFNAEGKL-------------------------KQLGALAEFIVVEESLIAKKPKNISF  124 (327)
Q Consensus        82 Gd~V~~~~~------------~~~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~  124 (327)
                      ||+|++...            ..+.|...                         ...|+|++|+.++.++++++|+++++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~  157 (363)
T cd08279          78 GDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL  157 (363)
T ss_pred             CCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence            999998421            11122110                         24689999999999999999999999


Q ss_pred             HhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCC
Q 020320          125 EEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYR  202 (327)
Q Consensus       125 ~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~  202 (327)
                      ++++.++.++.+||+++ ...++.++++++|+| +|.+|++++++|+.+ |.+ ++.+++++++.+.++++|++++++.+
T Consensus       158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~-G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~  235 (363)
T cd08279         158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIA-GASRIIAVDPVPEKLELARRFGATHTVNAS  235 (363)
T ss_pred             HHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence            99999999999999987 468899999999996 799999999999998 886 77777888899999999999998877


Q ss_pred             CCChhhhc------cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCC-C-----ceee------EEe----ecCH
Q 020320          203 KTKYEDIE------EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSH-P-----RAIY------SSL----TVSG  257 (327)
Q Consensus       203 ~~~~~~~~------~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~-~-----~~~~------~~~----~~~~  257 (327)
                      ..++...+      +++|+++|+++.   ....+++++++|+++.++..... .     ..+.      ...    ....
T Consensus       236 ~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (363)
T cd08279         236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPR  315 (363)
T ss_pred             CccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcH
Confidence            65544322      469999999984   26788999999999998754310 0     0000      111    1235


Q ss_pred             HHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEE
Q 020320          258 EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVV  304 (327)
Q Consensus       258 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~v  304 (327)
                      +.+++++++++++.+++...++++|+++++++||+.+.+++..+.++
T Consensus       316 ~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         316 RDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            78899999999999886433568899999999999998887765544

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-34  Score=260.11  Aligned_cols=299  Identities=27%  Similarity=0.384  Sum_probs=241.3

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||+++++.++.   +.+.+++.|.+.+++|+||+.++++|+.|+....+.++...+|.++|+|++|+|+++|++++.+++
T Consensus         1 ~~a~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~   77 (337)
T cd08261           1 MKALVCEKPGR---LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKV   77 (337)
T ss_pred             CeEEEEeCCCc---eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCC
Confidence            79999987654   899999999999999999999999999999988776655556788999999999999999999999


Q ss_pred             CCEEEEec------------ccccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320           82 GDEVYGNI------------QDFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA  144 (327)
Q Consensus        82 Gd~V~~~~------------~~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~  144 (327)
                      ||+|++..            ...+.|+.     ....|+|++|++++++ ++++|+++++++++.+ ..+.++++++...
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~~~~  155 (337)
T cd08261          78 GDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAVRRA  155 (337)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHHHhc
Confidence            99999731            11222211     1136899999999999 9999999999999866 5667888888778


Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEe
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYD  218 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d  218 (327)
                      ++.++++|||+| +|.+|.+++++|+.+ |.+++++++++++.++++++|++++++.+...+...+      .++|+++|
T Consensus       156 ~l~~g~~vLI~g-~g~vG~~a~~lA~~~-g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld  233 (337)
T cd08261         156 GVTAGDTVLVVG-AGPIGLGVIQVAKAR-GARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVID  233 (337)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEE
Confidence            899999999996 799999999999999 9999888889999999999999999987765544432      35999999


Q ss_pred             CCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccch
Q 020320          219 TIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKF  284 (327)
Q Consensus       219 ~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~  284 (327)
                      ++|+   ....+++++++|+++.++......           ..+........+.++++++++++|.+++...+...+++
T Consensus       234 ~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~  313 (337)
T cd08261         234 ATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPF  313 (337)
T ss_pred             CCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeH
Confidence            9974   366789999999999887443110           01111112335678899999999999862224678999


Q ss_pred             hhHHHHHHHHHhC-CCCceEEEEe
Q 020320          285 KDVIEAFRYLETG-RARGKVVISA  307 (327)
Q Consensus       285 ~~i~~a~~~~~~~-~~~gk~vv~~  307 (327)
                      ++++++++.+.++ ...+|+|+++
T Consensus       314 ~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         314 EDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHHHHHHhcCCCceEEEEEeC
Confidence            9999999999887 4668998753

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1.5e-34  Score=261.95  Aligned_cols=297  Identities=23%  Similarity=0.301  Sum_probs=237.9

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCC-CCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQ-HDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~-~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++..++.   +.+++.+.|.+. +++|+|++.++++|++|+....+.++ ..+|.++|+|++|+|+++|+++++++
T Consensus         1 ~~a~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (344)
T cd08284           1 MKAVVFKGPGD---VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLK   76 (344)
T ss_pred             CeeEEEecCCC---ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccC
Confidence            89999987643   999999999985 99999999999999999988877654 34578899999999999999999999


Q ss_pred             CCCEEEEeccc------------ccccC---------cCCCCCceeeEEEeecc--ceecCCCCCCHHhhcccchHHHHH
Q 020320           81 TGDEVYGNIQD------------FNAEG---------KLKQLGALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTA  137 (327)
Q Consensus        81 ~Gd~V~~~~~~------------~~~~~---------~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta  137 (327)
                      +||+|++....            ...|.         .....|+|++|++++.+  +++++|+++++++++.++..+.||
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta  156 (344)
T cd08284          77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTG  156 (344)
T ss_pred             CCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHH
Confidence            99999986421            11110         01125899999999864  999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------
Q 020320          138 IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------  210 (327)
Q Consensus       138 ~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------  210 (327)
                      |+++...++.++++|+|+| +|.+|++++++|+.+ |+ +++++..++++..+++++|++ +++.+..++...+      
T Consensus       157 ~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~~~~~  233 (344)
T cd08284         157 YFGAKRAQVRPGDTVAVIG-CGPVGLCAVLSAQVL-GAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVREATEG  233 (344)
T ss_pred             HhhhHhcCCccCCEEEEEC-CcHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHHHhCC
Confidence            9999778889999999997 899999999999999 86 677776788888888999976 4555544443321      


Q ss_pred             cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCCc------------eeeEEeecCHHHHHHHHhHHHCCCceee
Q 020320          211 EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHPR------------AIYSSLTVSGEILEKLRPFIESGKLKAQ  275 (327)
Q Consensus       211 ~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~  275 (327)
                      +++|+++|++|.   ...++.+++++|+++.+|.......            .+........+.++++++++.++.+++.
T Consensus       234 ~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  313 (344)
T cd08284         234 RGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLE  313 (344)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChH
Confidence            479999999984   3677899999999999985541110            1111122346789999999999998764


Q ss_pred             eCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          276 IDPTGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       276 ~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      .++++.|++++++++|+.+.++.. +|+|+.
T Consensus       314 ~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         314 FLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             HhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence            345688999999999999888777 898875

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.1e-34  Score=262.71  Aligned_cols=298  Identities=24%  Similarity=0.319  Sum_probs=237.2

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      +|++++...+..  +++++.+.|.+.+++|+||+.++++|++|++.+.+.+. ..+|.++|||++|+|+++|++++++++
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~   77 (365)
T cd05279           1 CKAAVLWEKGKP--LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKP   77 (365)
T ss_pred             CceeEEecCCCC--cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            478888876653  89999999999999999999999999999998887653 456789999999999999999999999


Q ss_pred             CCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceecCCCCCC
Q 020320           82 GDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAKKPKNIS  123 (327)
Q Consensus        82 Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~~p~~~~  123 (327)
                      ||+|++...            ..+.|...                          ...|+|++|+.++.+.++++|++++
T Consensus        78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~  157 (365)
T cd05279          78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP  157 (365)
T ss_pred             CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence            999998632            11112100                          0247899999999999999999999


Q ss_pred             HHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcE-EEEeCCcccHHHHHHcCCCEEEeC
Q 020320          124 FEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH-VVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       124 ~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~-v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      +++++.++.++.++|+++ ..+++.+|++++|+| +|++|++++++|+++ |+++ +++.+++++.+.++++|++++++.
T Consensus       158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~  235 (365)
T cd05279         158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAA-GASRIIAVDINKDKFEKAKQLGATECINP  235 (365)
T ss_pred             HHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCCeeccc
Confidence            999999988999999987 468899999999997 799999999999999 8864 455568899999999999998876


Q ss_pred             CCC--Chhhh-----ccCccEEEeCCCC---chhhhhhhc-CCCcEEEeeCCCCC-Cc-----eee------EEe---ec
Q 020320          202 RKT--KYEDI-----EEKFDVLYDTIGD---CKNSFVVAK-DNAPIVDITWPPSH-PR-----AIY------SSL---TV  255 (327)
Q Consensus       202 ~~~--~~~~~-----~~~~d~v~d~~g~---~~~~~~~l~-~~g~~v~~g~~~~~-~~-----~~~------~~~---~~  255 (327)
                      .+.  ++...     .+++|+++|++|.   ...++.+++ ++|+++.+|..... ..     .+.      ...   ..
T Consensus       236 ~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~  315 (365)
T cd05279         236 RDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWK  315 (365)
T ss_pred             ccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCc
Confidence            654  33322     1479999999984   267789999 99999998754311 10     110      010   13


Q ss_pred             CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          256 SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       256 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      ..+.+..++++++++.+++.++.+++|+++++++||+.+.++... |+++
T Consensus       316 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         316 SKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             hHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            457789999999999998755678999999999999998876554 5544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.9e-34  Score=257.56  Aligned_cols=295  Identities=28%  Similarity=0.340  Sum_probs=241.0

Q ss_pred             ceeEEecccCCC--cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 020320            2 QNAWYYEEYGPK--EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         2 ~~~~v~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      ||++++.+++.+  +.+++.+.+.|.+.++||+||+.++++|++|++...|.++...+|.++|||++|+|+++|++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            899999988842  348888888888999999999999999999999988876555668899999999999999999999


Q ss_pred             CCCCEEEEec-----c--------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320           80 NTGDEVYGNI-----Q--------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF  141 (327)
Q Consensus        80 ~~Gd~V~~~~-----~--------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  141 (327)
                      ++||+|++..     .        ..+.|.     +....|+|++|+.++.+.++++|+++++.+++.++.++.+||+++
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~  160 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL  160 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH
Confidence            9999998631     0        111221     111368999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      ..++++++++++|+| +|++|+++++++++. |.++++++.++++++.++++|++++++....    ..+++|+++++.+
T Consensus       161 ~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~vD~vi~~~~  234 (329)
T cd08298         161 KLAGLKPGQRLGLYG-FGASAHLALQIARYQ-GAEVFAFTRSGEHQELARELGADWAGDSDDL----PPEPLDAAIIFAP  234 (329)
T ss_pred             HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEcCChHHHHHHHHhCCcEEeccCcc----CCCcccEEEEcCC
Confidence            889999999999997 899999999999999 8999988899999999999999887765432    1246899999865


Q ss_pred             C---chhhhhhhcCCCcEEEeeCCCCCCce-----------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhH
Q 020320          222 D---CKNSFVVAKDNAPIVDITWPPSHPRA-----------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDV  287 (327)
Q Consensus       222 ~---~~~~~~~l~~~g~~v~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i  287 (327)
                      .   ...++++++++|+++..|........           +........+.++.++++++++.+++.   ++.|+++++
T Consensus       235 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~---~~~~~~~~~  311 (329)
T cd08298         235 VGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPE---VETYPLEEA  311 (329)
T ss_pred             cHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhhhhCceEEEEecCCCHHHHHHHHHHHHcCCCCce---EEEEeHHHH
Confidence            3   37789999999999988743211100           111112446778999999999998763   578999999


Q ss_pred             HHHHHHHHhCCCCceEEE
Q 020320          288 IEAFRYLETGRARGKVVI  305 (327)
Q Consensus       288 ~~a~~~~~~~~~~gk~vv  305 (327)
                      ++|++.+.++...+|+++
T Consensus       312 ~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         312 NEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHHHHHHcCCCcceeeC
Confidence            999999999888888763

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=1.9e-34  Score=264.00  Aligned_cols=297  Identities=21%  Similarity=0.210  Sum_probs=234.6

Q ss_pred             ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++..++.   ++++++|.|.+ +++||+||+.++++|++|++.+.+.++ ..+|.++|||++|+|+++|++++.++
T Consensus         1 m~~~~~~~~~~---~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~   76 (375)
T cd08282           1 MKAVVYGGPGN---VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLK   76 (375)
T ss_pred             CceEEEecCCc---eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCC
Confidence            78999987764   99999999996 799999999999999999999887654 34688999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCc---------------CCCCCceeeEEEeecc--ceecCCCCCCHH---hhc
Q 020320           81 TGDEVYGNIQ------------DFNAEGK---------------LKQLGALAEFIVVEES--LIAKKPKNISFE---EAA  128 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~---------------~~~~g~~~~~~~v~~~--~~~~~p~~~~~~---~aa  128 (327)
                      +||+|++...            ..+.|..               ...+|+|++|+.++.+  +++++|++++++   .++
T Consensus        77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a  156 (375)
T cd08282          77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYL  156 (375)
T ss_pred             CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhee
Confidence            9999987321            0111211               1125899999999975  899999999998   467


Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      .++..+.++|+++...++.+|++|+|.| +|.+|++++++|+++ |+ +++++.+++++.++++++|++ .++.++.++.
T Consensus       157 ~~~~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~  233 (375)
T cd08282         157 MLSDIFPTGWHGLELAGVQPGDTVAVFG-AGPVGLMAAYSAILR-GASRVYVVDHVPERLDLAESIGAI-PIDFSDGDPV  233 (375)
T ss_pred             eecchHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCe-EeccCcccHH
Confidence            7788889999999778899999999976 799999999999999 87 677776888899999999984 4555544433


Q ss_pred             hhc-----cCccEEEeCCCC--------------chhhhhhhcCCCcEEEeeCCCCCCc------------ee-------
Q 020320          208 DIE-----EKFDVLYDTIGD--------------CKNSFVVAKDNAPIVDITWPPSHPR------------AI-------  249 (327)
Q Consensus       208 ~~~-----~~~d~v~d~~g~--------------~~~~~~~l~~~g~~v~~g~~~~~~~------------~~-------  249 (327)
                      ..+     +++|+++|++|.              ...++.+++++|+++.+|.......            .+       
T Consensus       234 ~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (375)
T cd08282         234 EQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWA  313 (375)
T ss_pred             HHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHh
Confidence            321     369999999874              3667889999999988775331100            00       


Q ss_pred             -----eEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          250 -----YSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       250 -----~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                           ........+.++.+++++.++++++...+++.|++++++++++.+.++. .+|+|+.
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~  374 (375)
T cd08282         314 KGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK  374 (375)
T ss_pred             cCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence                 0000113467888999999999986433579999999999999998888 8898875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=5.4e-34  Score=253.98  Aligned_cols=292  Identities=38%  Similarity=0.562  Sum_probs=234.4

Q ss_pred             eEEeccc-CCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-C---CCCCccccccc---EEEEEeC-C
Q 020320            4 AWYYEEY-GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-S---DFPAVPGCDMA---GIVVAKG-T   74 (327)
Q Consensus         4 ~~v~~~~-~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~---~~p~~~G~e~~---G~V~~vG-~   74 (327)
                      .+.+..+ +..+....++.++|.+.+++++|++.++++||.|+.+..+.+.. .   .+|.+++.++.   |.+...| .
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~   86 (347)
T KOG1198|consen    7 RVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDD   86 (347)
T ss_pred             eEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccc
Confidence            3344434 44456667789999999999999999999999999999888743 3   47755555554   4445555 3


Q ss_pred             CCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-c------CCC
Q 020320           75 SVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-A------GFK  147 (327)
Q Consensus        75 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~------~~~  147 (327)
                      .+.....||++....          ..|+|+||.++|...++++|+++++.+|+.+|.+..|||.++.+ .      +++
T Consensus        87 ~~~~~~~g~~~~~~~----------~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~  156 (347)
T KOG1198|consen   87 VVGGWVHGDAVVAFL----------SSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLS  156 (347)
T ss_pred             cccceEeeeEEeecc----------CCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccC
Confidence            445567777666554          57999999999999999999999999999999999999999964 6      699


Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~  222 (327)
                      +|++|||+||+|++|++++|+|++. ++..++++++++++++++++|+|+++|+++.++.+..     .++|+||||+|.
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~-~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~  235 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHA-GAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGG  235 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhc-CCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCC
Confidence            9999999999999999999999999 6889999999999999999999999999998777654     369999999986


Q ss_pred             c--hhhhhhhcCCCcEEEeeCCC---CCCc----------------------eeeEEeecCHHHHHHHHhHHHCCCceee
Q 020320          223 C--KNSFVVAKDNAPIVDITWPP---SHPR----------------------AIYSSLTVSGEILEKLRPFIESGKLKAQ  275 (327)
Q Consensus       223 ~--~~~~~~l~~~g~~v~~g~~~---~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~  275 (327)
                      .  ...+.++...|+...++...   ....                      .....+....+.++.+.++++.+++++.
T Consensus       236 ~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~  315 (347)
T KOG1198|consen  236 STLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPV  315 (347)
T ss_pred             CccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCC
Confidence            4  55667777777644443211   0000                      0111223457889999999999999886


Q ss_pred             eCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          276 IDPTGPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       276 ~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      +  -+.||++++++|++.+.++...||+++++.
T Consensus       316 i--~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  316 I--DSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             c--ceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            4  689999999999999999999999999874

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=8.4e-34  Score=254.81  Aligned_cols=296  Identities=23%  Similarity=0.323  Sum_probs=233.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||+++++.+++++++++++.|.|.+++++|+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++  +++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            89999999987667999999999999999999999999999999988776532 335788999999999999  467899


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh---cCCC-CCCEEEEEc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT---AGFK-TGQTIFIVG  156 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~---~~~~-~~~~vlI~g  156 (327)
                      +||+|++.....    +....|+|++|++++.++++++|+++++++++.+++.+.++|+++..   .++. .+++|+|+|
T Consensus        79 ~Gd~V~~~~~~~----g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g  154 (325)
T cd05280          79 EGDEVLVTGYDL----GMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTG  154 (325)
T ss_pred             CCCEEEEccccc----CCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEEC
Confidence            999999864210    11236899999999999999999999999999999999999998853   3335 357999999


Q ss_pred             CCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC--hhhhc--cCccEEEeCCCC--chhhhhhh
Q 020320          157 GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK--YEDIE--EKFDVLYDTIGD--CKNSFVVA  230 (327)
Q Consensus       157 a~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~--~~~d~v~d~~g~--~~~~~~~l  230 (327)
                      ++|.+|++++++|+.+ |++++++++++++++.++++|++++++.+...  .....  +++|+++|++|.  ....++++
T Consensus       155 ~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l  233 (325)
T cd05280         155 ATGGVGSIAVAILAKL-GYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLKQT  233 (325)
T ss_pred             CccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHHhh
Confidence            8899999999999999 99998899999999999999999988765421  11111  469999999985  37788999


Q ss_pred             cCCCcEEEeeCCCCCC-----cee-eEEe--------ecC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320          231 KDNAPIVDITWPPSHP-----RAI-YSSL--------TVS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR  292 (327)
Q Consensus       231 ~~~g~~v~~g~~~~~~-----~~~-~~~~--------~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~  292 (327)
                      +++|+++.+|.....+     ... ....        ...    .+.++.+.+++..+...+   +...|++++++++++
T Consensus       234 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~  310 (325)
T cd05280         234 KYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLLEI---VVREISLEELPEAID  310 (325)
T ss_pred             cCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCccc---eeeEecHHHHHHHHH
Confidence            9999999998543211     001 1111        111    133455555666663332   468999999999999


Q ss_pred             HHHhCCCCceEEEEe
Q 020320          293 YLETGRARGKVVISA  307 (327)
Q Consensus       293 ~~~~~~~~gk~vv~~  307 (327)
                      .+.++...+|+++++
T Consensus       311 ~~~~~~~~gk~vv~~  325 (325)
T cd05280         311 RLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHhcCCcceEEEEeC
Confidence            999998889998864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1e-33  Score=255.39  Aligned_cols=296  Identities=28%  Similarity=0.404  Sum_probs=238.3

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++.+++.   +++.+.|.|++.+++|+||+.++++|+.|+....+.++. .+|.++|+|++|+|+++|++++++++
T Consensus         1 ~~a~~~~~~~~---~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~   76 (334)
T cd08234           1 MKALVYEGPGE---LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKV   76 (334)
T ss_pred             CeeEEecCCCc---eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCC
Confidence            89999998874   899999999999999999999999999999988776542 37789999999999999999999999


Q ss_pred             CCEEEEecccc----ccc-------------CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320           82 GDEVYGNIQDF----NAE-------------GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA  144 (327)
Q Consensus        82 Gd~V~~~~~~~----~~~-------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~  144 (327)
                      ||+|++.....    ..|             .+....|+|++|+.++.+.++++|+++++.+++.+ ..+.++++++...
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~~  155 (334)
T cd08234          77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGLDLL  155 (334)
T ss_pred             CCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHHHhc
Confidence            99998832111    000             01124689999999999999999999999988765 6677899988778


Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhh----hccCccEEEeC
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYED----IEEKFDVLYDT  219 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~~~~~d~v~d~  219 (327)
                      ++.++++++|+| +|.+|.+++++|+++ |++ ++++++++++.+.++++|++.+++.+..++..    ..+++|+++|+
T Consensus       156 ~~~~g~~vlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~  233 (334)
T cd08234         156 GIKPGDSVLVFG-AGPIGLLLAQLLKLN-GASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEA  233 (334)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEEC
Confidence            999999999997 799999999999998 887 67777888899999999998888766554322    12479999999


Q ss_pred             CCC---chhhhhhhcCCCcEEEeeCCCCCC-c----------e-eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccch
Q 020320          220 IGD---CKNSFVVAKDNAPIVDITWPPSHP-R----------A-IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKF  284 (327)
Q Consensus       220 ~g~---~~~~~~~l~~~g~~v~~g~~~~~~-~----------~-~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~  284 (327)
                      +|.   ....+++++++|+++.+|...... .          . .........+.+++++++++++++.+...+..+|++
T Consensus       234 ~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  313 (334)
T cd08234         234 TGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSHRLPL  313 (334)
T ss_pred             CCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEEEecH
Confidence            974   267789999999999987543210 0          0 111122345778999999999998754334678999


Q ss_pred             hhHHHHHHHHHhCCCCceEEE
Q 020320          285 KDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       285 ~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      ++++++++.+.+ ...+|+++
T Consensus       314 ~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         314 EEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHHHHHHHhc-CCceEEEe
Confidence            999999999988 77788876

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=7.9e-34  Score=254.20  Aligned_cols=294  Identities=29%  Similarity=0.434  Sum_probs=240.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++..++....+++.+.+.|.+.+++|+||+.++++|++|+....+..+...+|.++|||++|+|+++|+  .++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            7999998887666788888888889999999999999999999998877655455678899999999999995  57999


Q ss_pred             CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcCCch
Q 020320           82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAGG  160 (327)
Q Consensus        82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~  160 (327)
                      ||+|+++..+.    +....|+|++|+.++..+++++|+++++++++.++.++.+||+++.. ..+.+|++|+|+|++|.
T Consensus        79 Gd~V~~~~~~~----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~  154 (320)
T cd08243          79 GQRVATAMGGM----GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSS  154 (320)
T ss_pred             CCEEEEecCCC----CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCCh
Confidence            99999875311    11235899999999999999999999999999999999999999864 67899999999998999


Q ss_pred             HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh----ccCccEEEeCCCCc--hhhhhhhcCCC
Q 020320          161 VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI----EEKFDVLYDTIGDC--KNSFVVAKDNA  234 (327)
Q Consensus       161 ~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~----~~~~d~v~d~~g~~--~~~~~~l~~~g  234 (327)
                      +|++++++|+++ |++++.++.++++.+.+.++|++++++.. .++...    .+++|+++|++|+.  ...+.+++++|
T Consensus       155 ~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~i~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g  232 (320)
T cd08243         155 VGLAALKLAKAL-GATVTATTRSPERAALLKELGADEVVIDD-GAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLRPGG  232 (320)
T ss_pred             HHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEecC-ccHHHHHHHhCCCceEEEECCChHHHHHHHHHhccCC
Confidence            999999999999 99999888899999999999998887543 233221    24799999999853  67789999999


Q ss_pred             cEEEeeCCCCC-------Cc-------eee-EEe---ecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHh
Q 020320          235 PIVDITWPPSH-------PR-------AIY-SSL---TVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLET  296 (327)
Q Consensus       235 ~~v~~g~~~~~-------~~-------~~~-~~~---~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~  296 (327)
                      +++.+|.....       ..       ... ...   ......++.++++++++.+++.  +++.|+++++++|++.+.+
T Consensus       233 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~  310 (320)
T cd08243         233 IVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMES  310 (320)
T ss_pred             EEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHh
Confidence            99998753110       00       000 111   1123467889999999998763  5788999999999999998


Q ss_pred             CCCCceEEE
Q 020320          297 GRARGKVVI  305 (327)
Q Consensus       297 ~~~~gk~vv  305 (327)
                      +...+|+++
T Consensus       311 ~~~~~kvvv  319 (320)
T cd08243         311 NRAFGKVVV  319 (320)
T ss_pred             CCCCCcEEe
Confidence            888888875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.6e-33  Score=254.43  Aligned_cols=300  Identities=29%  Similarity=0.425  Sum_probs=245.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++..++.+. +.+.+.|.|.+.+++|+|++.++++|++|+....+.++ ...+|.++|+|++|+|+++|+++++++
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~   79 (338)
T cd08254           1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK   79 (338)
T ss_pred             CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence            8999999888765 68888999999999999999999999999998877664 344578899999999999999999999


Q ss_pred             CCCEEEEeccc------------cccc-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-
Q 020320           81 TGDEVYGNIQD------------FNAE-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-  142 (327)
Q Consensus        81 ~Gd~V~~~~~~------------~~~~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-  142 (327)
                      +||+|++....            .+.|     .+....|+|++|+.++.+.++++|+++++.+++.++..+.+||+++. 
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~  159 (338)
T cd08254          80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVR  159 (338)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence            99999873210            0011     01123589999999999999999999999999999999999999985 


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh-----ccCccEEE
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI-----EEKFDVLY  217 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-----~~~~d~v~  217 (327)
                      ...+.+++++||.| +|.+|++++++|+.+ |.++++++.++++.+.++++|.+++++..+......     .+++|+++
T Consensus       160 ~~~~~~~~~vli~g-~g~vG~~~~~la~~~-G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vi  237 (338)
T cd08254         160 AGEVKPGETVLVIG-LGGLGLNAVQIAKAM-GAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIF  237 (338)
T ss_pred             ccCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceEEE
Confidence            46799999999976 799999999999999 999888889999999999999998887665544321     24799999


Q ss_pred             eCCCC---chhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320          218 DTIGD---CKNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYK  283 (327)
Q Consensus       218 d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~  283 (327)
                      |++|.   ...++++++++|+++.++.......           .+........+.+..++++++++.+++.   .+.++
T Consensus       238 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~~~~  314 (338)
T cd08254         238 DFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ---VETRP  314 (338)
T ss_pred             ECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc---ceeEc
Confidence            99974   3678999999999999875321110           1111122336788999999999999864   57899


Q ss_pred             hhhHHHHHHHHHhCCCCceEEEEe
Q 020320          284 FKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       284 ~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +++++++++.+.++...+|+++++
T Consensus       315 ~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         315 LDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHHHHHHHcCCccceEEEeC
Confidence            999999999999999889999864

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.7e-34  Score=256.68  Aligned_cols=290  Identities=20%  Similarity=0.301  Sum_probs=227.2

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||+++++++++   +++++.|.|++++++|+||+.++++|++|+....+.++   +|.++|||++|+|+++|++   +++
T Consensus         1 ~~a~~~~~~~~---~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~   71 (319)
T cd08242           1 MKALVLDGGLD---LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELV   71 (319)
T ss_pred             CeeEEEeCCCc---EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCC
Confidence            79999987654   99999999999999999999999999999998877543   5778999999999999998   679


Q ss_pred             CCEEEEeccc------------ccccCc------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320           82 GDEVYGNIQD------------FNAEGK------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT  143 (327)
Q Consensus        82 Gd~V~~~~~~------------~~~~~~------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~  143 (327)
                      ||+|......            +..|.+      ....|+|++|++++.++++++|++++.++++.+ ..+.++|.+++.
T Consensus        72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~~~  150 (319)
T cd08242          72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEILEQ  150 (319)
T ss_pred             CCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHHHh
Confidence            9999753211            011111      023689999999999999999999999888863 334467777778


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC-
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD-  222 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~-  222 (327)
                      .+++++++++|+| +|.+|++++++|+.+ |+++++++.++++.+.++++|++.+++.+..   ....++|+++|++|. 
T Consensus       151 ~~~~~g~~vlV~g-~g~vg~~~~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~d~vid~~g~~  225 (319)
T cd08242         151 VPITPGDKVAVLG-DGKLGLLIAQVLALT-GPDVVLVGRHSEKLALARRLGVETVLPDEAE---SEGGGFDVVVEATGSP  225 (319)
T ss_pred             cCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---ccCCCCCEEEECCCCh
Confidence            8999999999997 899999999999999 9998888888999999999999888765432   122479999999975 


Q ss_pred             --chhhhhhhcCCCcEEEeeCCCCCCc-e----eeEEeecCH---HHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320          223 --CKNSFVVAKDNAPIVDITWPPSHPR-A----IYSSLTVSG---EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR  292 (327)
Q Consensus       223 --~~~~~~~l~~~g~~v~~g~~~~~~~-~----~~~~~~~~~---~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~  292 (327)
                        ...++.+++++|+++..+....... .    ......+.+   ..+++++++++++++++...+++.|+++++++||+
T Consensus       226 ~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~  305 (319)
T cd08242         226 SGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFE  305 (319)
T ss_pred             HHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHH
Confidence              3677889999999998664321110 0    011111111   24888999999999964334578999999999999


Q ss_pred             HHHhCCCCceEEEEe
Q 020320          293 YLETGRARGKVVISA  307 (327)
Q Consensus       293 ~~~~~~~~gk~vv~~  307 (327)
                      .+.++. .+|+++++
T Consensus       306 ~~~~~~-~~k~vi~~  319 (319)
T cd08242         306 RAAEPG-ALKVLLRP  319 (319)
T ss_pred             HHhcCC-ceEEEeCC
Confidence            998665 47988763

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=6.3e-34  Score=257.91  Aligned_cols=298  Identities=19%  Similarity=0.243  Sum_probs=232.3

Q ss_pred             ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++..+++   +++.+.|.|.+ +++||+||+.++++|++|+..+.+.++ ...|.++|||++|+|+++|+++++++
T Consensus         1 m~~~~~~~~~~---~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (345)
T cd08287           1 MRATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVK   76 (345)
T ss_pred             CceeEEecCCc---eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccC
Confidence            89999987765   99999999986 999999999999999999988877654 34578999999999999999999999


Q ss_pred             CCCEEEE-eccccc-----------ccC-----cCCCCCceeeEEEeecc--ceecCCCCCCHHhhc-----ccchHHHH
Q 020320           81 TGDEVYG-NIQDFN-----------AEG-----KLKQLGALAEFIVVEES--LIAKKPKNISFEEAA-----SLPLAVQT  136 (327)
Q Consensus        81 ~Gd~V~~-~~~~~~-----------~~~-----~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa-----~~~~~~~t  136 (327)
                      +||+|++ +.....           .|.     +...+|+|++|+.++.+  .++++|+++++..+.     .+...+.+
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~  156 (345)
T cd08287          77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGT  156 (345)
T ss_pred             CCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHH
Confidence            9999987 322111           111     11235899999999874  999999999873221     12256788


Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----
Q 020320          137 AIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----  210 (327)
Q Consensus       137 a~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----  210 (327)
                      ||+++...++.++++++|.| +|.+|++++++|+++ |++ ++++.+++++.+.++++|++++++.+...+.+.+     
T Consensus       157 a~~~~~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~  234 (345)
T cd08287         157 GHHAAVSAGVRPGSTVVVVG-DGAVGLCAVLAAKRL-GAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELTG  234 (345)
T ss_pred             HHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhcC
Confidence            99998878899999999976 899999999999999 887 4454467778888899999999988765554422     


Q ss_pred             -cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCC-Cce----------eeEEeecCHHHHHHHHhHHHCCCceee
Q 020320          211 -EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSH-PRA----------IYSSLTVSGEILEKLRPFIESGKLKAQ  275 (327)
Q Consensus       211 -~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~-~~~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~  275 (327)
                       .++|+++|++|+   ...++++++++|+++.++..... ...          +........+.++++++++.++++++.
T Consensus       235 ~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  314 (345)
T cd08287         235 GVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGRINPG  314 (345)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCCCCHH
Confidence             369999999974   37788999999999998754411 100          011112235778999999999999864


Q ss_pred             eCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          276 IDPTGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       276 ~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      ...++.+++++++++++.+.+.... |++++
T Consensus       315 ~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  344 (345)
T cd08287         315 RVFDLTLPLDEVAEGYRAMDERRAI-KVLLR  344 (345)
T ss_pred             HhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence            4446889999999999998776554 88875

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=1.1e-33  Score=256.87  Aligned_cols=293  Identities=38%  Similarity=0.620  Sum_probs=237.4

Q ss_pred             ceeEEecccCCC-cceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCC---------------CCCCCCccccc
Q 020320            2 QNAWYYEEYGPK-EVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLF---------------PSDFPAVPGCD   64 (327)
Q Consensus         2 ~~~~v~~~~~~~-~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~---------------~~~~p~~~G~e   64 (327)
                      ||++++.+++++ +.+++++.+.|.| .+++|+||+.++++|++|++...+...               ...+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            899999988875 3588999999999 599999999999999999998776311               23457899999


Q ss_pred             ccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-h
Q 020320           65 MAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-T  143 (327)
Q Consensus        65 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~  143 (327)
                      ++|+|+.+|++++++++||+|+++...       ...|+|++|++++.++++++|++++++.++.++..+.++|+++. .
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~  153 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP-------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNV  153 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC-------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHh
Confidence            999999999999999999999987421       13589999999999999999999999999999999999999985 4


Q ss_pred             cCCC----CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh---ccCccEE
Q 020320          144 AGFK----TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDVL  216 (327)
Q Consensus       144 ~~~~----~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v  216 (327)
                      ..+.    +|++++|+|++|++|++++++++++ |+++++++++ ++.+.++++|.+++++.....+...   .+++|++
T Consensus       154 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~v  231 (350)
T cd08248         154 GGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAW-GAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVI  231 (350)
T ss_pred             ccCCCccCCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHhcCCCCEE
Confidence            5554    4999999999999999999999999 9988777654 5778889999988887665444332   2579999


Q ss_pred             EeCCCCc--hhhhhhhcCCCcEEEeeCCCCCCc---ee----e----------------------EEeecCHHHHHHHHh
Q 020320          217 YDTIGDC--KNSFVVAKDNAPIVDITWPPSHPR---AI----Y----------------------SSLTVSGEILEKLRP  265 (327)
Q Consensus       217 ~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~~~---~~----~----------------------~~~~~~~~~~~~~~~  265 (327)
                      +|++|..  ..++.+++++|+++.++.......   ..    +                      .......+.+.++++
T Consensus       232 i~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (350)
T cd08248         232 LDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAK  311 (350)
T ss_pred             EECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHH
Confidence            9999853  678899999999999874321100   00    0                      001123567889999


Q ss_pred             HHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          266 FIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       266 l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      ++.++.+.+.  +++.|++++++++|+.+.++...+|+++
T Consensus       312 ~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~  349 (350)
T cd08248         312 LVEDGKIKPV--IDKVFPFEEVPEAYEKVESGHARGKTVI  349 (350)
T ss_pred             HHhCCCEecc--cceeecHHHHHHHHHHHhcCCCceEEEe
Confidence            9999998753  5789999999999999988877778775

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=9.9e-34  Score=256.43  Aligned_cols=297  Identities=26%  Similarity=0.378  Sum_probs=236.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++++++.   +.+++.+.|++.++||+||+.++++|++|+....+.+ ....|.++|+|++|+|+.+|++++.+++
T Consensus         1 ~~a~~~~~~~~---l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~   76 (343)
T cd08236           1 MKALVLTGPGD---LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAV   76 (343)
T ss_pred             CeeEEEecCCc---eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCC
Confidence            89999998764   8999999999999999999999999999998887754 2335778999999999999999999999


Q ss_pred             CCEEEEeccc-ccc-----------c-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320           82 GDEVYGNIQD-FNA-----------E-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA  144 (327)
Q Consensus        82 Gd~V~~~~~~-~~~-----------~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~  144 (327)
                      ||+|+++... ...           |     .+....|+|++|+.++.++++++|+++++++++.+ ..+.++|+++...
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~~~  155 (343)
T cd08236          77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVRLA  155 (343)
T ss_pred             CCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHHhc
Confidence            9999987321 011           1     11124689999999999999999999999999877 5678999999878


Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hc--cCccEEEe
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYED---IE--EKFDVLYD  218 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~--~~~d~v~d  218 (327)
                      .+.++++|+|+| +|.+|++++++|+.+ |++ ++++++++++.++++++|++.+++.+.....+   ..  +++|+++|
T Consensus       156 ~~~~~~~vlI~g-~g~~g~~~~~lA~~~-G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vld  233 (343)
T cd08236         156 GITLGDTVVVIG-AGTIGLLAIQWLKIL-GAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGADLVIE  233 (343)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCCEEEE
Confidence            899999999997 799999999999999 987 77777888888888999999888776544221   11  35999999


Q ss_pred             CCCC---chhhhhhhcCCCcEEEeeCCCCCC--------------ceeeEEeec-----CHHHHHHHHhHHHCCCceeee
Q 020320          219 TIGD---CKNSFVVAKDNAPIVDITWPPSHP--------------RAIYSSLTV-----SGEILEKLRPFIESGKLKAQI  276 (327)
Q Consensus       219 ~~g~---~~~~~~~l~~~g~~v~~g~~~~~~--------------~~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~~  276 (327)
                      ++|.   ...++++++++|+++.+|......              ..+......     ..+.++++++++.++.+.+..
T Consensus       234 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  313 (343)
T cd08236         234 AAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEP  313 (343)
T ss_pred             CCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHH
Confidence            9974   367889999999999987443210              001111111     156788999999999986322


Q ss_pred             CCCcccchhhHHHHHHHHHh-CCCCceEEE
Q 020320          277 DPTGPYKFKDVIEAFRYLET-GRARGKVVI  305 (327)
Q Consensus       277 ~~~~~~~~~~i~~a~~~~~~-~~~~gk~vv  305 (327)
                      .....+++++++++++.+.+ ....+|+|+
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         314 LITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             heeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            24578999999999999988 566678763

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=3.4e-33  Score=252.09  Aligned_cols=296  Identities=33%  Similarity=0.515  Sum_probs=240.8

Q ss_pred             ceeEEecccCCCc---ceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCC
Q 020320            2 QNAWYYEEYGPKE---VLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         2 ~~~~v~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      ||+++++.+++++   .+.+.++|.|.+.+++|+||+.++++|++|++...+..+...+|.++|||++|+|+.+|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            7999999998875   5888889999999999999999999999999887776543446778999999999999999999


Q ss_pred             CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCC-----CCEE
Q 020320           79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKT-----GQTI  152 (327)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~-----~~~v  152 (327)
                      +++||+|+++..       ....|+|++|+.++.++++++|++++.++++.+++.+.++|+++ ....+.+     ++++
T Consensus        81 ~~~Gd~V~~~~~-------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~v  153 (336)
T cd08252          81 FKVGDEVYYAGD-------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTL  153 (336)
T ss_pred             CCCCCEEEEcCC-------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEE
Confidence            999999998631       01358999999999999999999999999999999999999997 4577777     9999


Q ss_pred             EEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCC---c
Q 020320          153 FIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD---C  223 (327)
Q Consensus       153 lI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~---~  223 (327)
                      +|+|++|.+|++++++++.+ | .++++++.++++.++++++|++++++.+. .+....     +++|+++|++|.   .
T Consensus       154 lV~g~~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~~~~  231 (336)
T cd08252         154 LIIGGAGGVGSIAIQLAKQL-TGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTDQHW  231 (336)
T ss_pred             EEEcCCchHHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcHHHH
Confidence            99998999999999999999 8 99999989999999999999999887664 332211     479999999974   3


Q ss_pred             hhhhhhhcCCCcEEEeeCCCC---------CCceeeEE-ee-----------cCHHHHHHHHhHHHCCCceeeeC-CCcc
Q 020320          224 KNSFVVAKDNAPIVDITWPPS---------HPRAIYSS-LT-----------VSGEILEKLRPFIESGKLKAQID-PTGP  281 (327)
Q Consensus       224 ~~~~~~l~~~g~~v~~g~~~~---------~~~~~~~~-~~-----------~~~~~~~~~~~l~~~g~~~~~~~-~~~~  281 (327)
                      ..++.+++++|+++.+|....         ....+... ..           ...+.++++++++.+|.+++... ....
T Consensus       232 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  311 (336)
T cd08252         232 DAMAELIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGP  311 (336)
T ss_pred             HHHHHHhcCCCEEEEecCCCCcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecC
Confidence            778899999999999875320         00011110 00           01245788999999999986421 1246


Q ss_pred             cchhhHHHHHHHHHhCCCCceEEEE
Q 020320          282 YKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       282 ~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      +++++++++++.+.++...+|++++
T Consensus       312 ~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         312 INAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             CCHHHHHHHHHHHHcCCccceEEeC
Confidence            8999999999999988888888864

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.5e-33  Score=253.32  Aligned_cols=291  Identities=30%  Similarity=0.440  Sum_probs=228.5

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++..++ .+.+++.+.+.|+++++||+||+.++++|++|++.+.+ +....+|.++|||++|+|+++|++++++++
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   78 (325)
T cd08264           1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKK   78 (325)
T ss_pred             CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCC
Confidence            8999998777 55699999998899999999999999999999988764 222235778999999999999999999999


Q ss_pred             CCEEEEecc------------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320           82 GDEVYGNIQ------------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA  144 (327)
Q Consensus        82 Gd~V~~~~~------------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~  144 (327)
                      ||+|+++..            ..+.|.     +....|+|++|++++.+.++++|+++++++++.++.++.+||+++...
T Consensus        79 Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~  158 (325)
T cd08264          79 GDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTA  158 (325)
T ss_pred             CCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHhc
Confidence            999997631            111121     112468999999999999999999999999999999999999999778


Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCC--ChhhhccCccEEEeCCCC
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKT--KYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~~~d~v~d~~g~  222 (327)
                      +++++++++|+|++|.+|++++++|+++ |.+++++++    .+.++++|++++++.++.  ......+++|++++++|.
T Consensus       159 ~~~~g~~vlI~g~~g~vg~~~~~~a~~~-G~~v~~~~~----~~~~~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~  233 (325)
T cd08264         159 GLGPGETVVVFGASGNTGIFAVQLAKMM-GAEVIAVSR----KDWLKEFGADEVVDYDEVEEKVKEITKMADVVINSLGS  233 (325)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeH----HHHHHHhCCCeeecchHHHHHHHHHhCCCCEEEECCCH
Confidence            8999999999998899999999999999 888877753    367788999888865431  111112679999999985


Q ss_pred             c--hhhhhhhcCCCcEEEeeCCCCC--Cce----------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHH
Q 020320          223 C--KNSFVVAKDNAPIVDITWPPSH--PRA----------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVI  288 (327)
Q Consensus       223 ~--~~~~~~l~~~g~~v~~g~~~~~--~~~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~  288 (327)
                      .  ..++++++++|+++.+|.....  ...          +........+.++++++++.+.++.    +.+.|++++++
T Consensus       234 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~  309 (325)
T cd08264         234 SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLKVK----VWKTFKLEEAK  309 (325)
T ss_pred             HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCCce----eEEEEcHHHHH
Confidence            3  6788999999999998853211  100          1111112246888999999655432    25789999999


Q ss_pred             HHHHHHHhCCCCceE
Q 020320          289 EAFRYLETGRARGKV  303 (327)
Q Consensus       289 ~a~~~~~~~~~~gk~  303 (327)
                      +|++.+.++...+|+
T Consensus       310 ~a~~~~~~~~~~~kv  324 (325)
T cd08264         310 EALKELFSKERDGRI  324 (325)
T ss_pred             HHHHHHHcCCCcccc
Confidence            999999877766664

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=2.4e-33  Score=251.68  Aligned_cols=288  Identities=26%  Similarity=0.356  Sum_probs=237.1

Q ss_pred             EecccCCCc--ceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320            6 YYEEYGPKE--VLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFNTG   82 (327)
Q Consensus         6 v~~~~~~~~--~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   82 (327)
                      ++++++.+.  .+++++.|.|++.+++|+||+.++++|+.|+..+.+.+. ...+|.++|||++|+|+.+|++++++++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~G   81 (323)
T cd05282           2 VYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVG   81 (323)
T ss_pred             eeCcCCCCccceEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCC
Confidence            345566554  688999999999999999999999999999988876543 23467889999999999999999999999


Q ss_pred             CEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchH
Q 020320           83 DEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGV  161 (327)
Q Consensus        83 d~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~  161 (327)
                      |+|+++.          ..|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++. ...+.++++++|+|++|.+
T Consensus        82 d~V~~~~----------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~v  151 (323)
T cd05282          82 QRVLPLG----------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAV  151 (323)
T ss_pred             CEEEEeC----------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHH
Confidence            9999974          1589999999999999999999999999988889999999985 5678999999999988999


Q ss_pred             HHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCC
Q 020320          162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDN  233 (327)
Q Consensus       162 G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~  233 (327)
                      |++++++|+++ |++++++++++++.+.++++|++++++.++..+...+      +++|+++|++|+.  ...+++++++
T Consensus       152 g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~  230 (323)
T cd05282         152 GRMLIQLAKLL-GFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPG  230 (323)
T ss_pred             HHHHHHHHHHC-CCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCC
Confidence            99999999999 9999999999999999999999999887664444322      4799999999853  6678999999


Q ss_pred             CcEEEeeCCCCCC----------cee-eEEeec-------C----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHH
Q 020320          234 APIVDITWPPSHP----------RAI-YSSLTV-------S----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAF  291 (327)
Q Consensus       234 g~~v~~g~~~~~~----------~~~-~~~~~~-------~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~  291 (327)
                      |+++.+|.....+          ... +.....       .    .+.++++++++.++.+.+.  .++.|++++++++|
T Consensus       231 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~  308 (323)
T cd05282         231 GTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAV  308 (323)
T ss_pred             CEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHHHHHHHH
Confidence            9999887442211          001 011111       1    2457889999999998753  47889999999999


Q ss_pred             HHHHhCCCCceEEEE
Q 020320          292 RYLETGRARGKVVIS  306 (327)
Q Consensus       292 ~~~~~~~~~gk~vv~  306 (327)
                      +.+.++...+|++++
T Consensus       309 ~~~~~~~~~~kvv~~  323 (323)
T cd05282         309 AAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHHhcCCCCceEeeC
Confidence            999988888888863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=2.8e-33  Score=251.35  Aligned_cols=294  Identities=22%  Similarity=0.326  Sum_probs=234.3

Q ss_pred             eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      |++++...+.+++++++++|.|.+.+++|+||+.++++|++|++.+.+.++. ..+|.++|||++|+|+.  +++..+++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            6888888887778999999999999999999999999999999988776532 34688899999999988  56778999


Q ss_pred             CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH---hcCCCCCC-EEEEEcC
Q 020320           82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK---TAGFKTGQ-TIFIVGG  157 (327)
Q Consensus        82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~---~~~~~~~~-~vlI~ga  157 (327)
                      ||+|+++....    +.+..|++++|++++.++++++|+++++++++.++..+.++|+++.   ...+.+++ +++|+|+
T Consensus        79 Gd~V~~~~~~~----~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~  154 (323)
T TIGR02823        79 GDEVIVTGYGL----GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGA  154 (323)
T ss_pred             CCEEEEccCCC----CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcC
Confidence            99999874211    1123689999999999999999999999999999888888888763   34588898 9999998


Q ss_pred             CchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh-hhc--cCccEEEeCCCC--chhhhhhhcC
Q 020320          158 AGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE-DIE--EKFDVLYDTIGD--CKNSFVVAKD  232 (327)
Q Consensus       158 ~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~-~~~--~~~d~v~d~~g~--~~~~~~~l~~  232 (327)
                      +|.+|++++++|+++ |++++++++++++.+.++++|++++++.++.... ...  .++|+++|++|.  ....+.++++
T Consensus       155 ~g~vg~~~~~la~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~  233 (323)
T TIGR02823       155 TGGVGSLAVAILSKL-GYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHTLANVLAQLKY  233 (323)
T ss_pred             CcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHHHHHHHHHHhCC
Confidence            899999999999999 9999988888888899999999988876543321 111  358999999984  3678899999


Q ss_pred             CCcEEEeeCCCCCCc----------eee-EEee---cC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHH
Q 020320          233 NAPIVDITWPPSHPR----------AIY-SSLT---VS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYL  294 (327)
Q Consensus       233 ~g~~v~~g~~~~~~~----------~~~-~~~~---~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~  294 (327)
                      +|+++.+|.....+.          ... ....   ..    .+.++.+.+++..+.+.+.   .+.|+++++++||+.+
T Consensus       234 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~a~~~~  310 (323)
T TIGR02823       234 GGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI---TREITLEELPEALEQI  310 (323)
T ss_pred             CCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc---eeeecHHHHHHHHHHH
Confidence            999999985431111          000 1110   11    2345667777778877642   4689999999999999


Q ss_pred             HhCCCCceEEEE
Q 020320          295 ETGRARGKVVIS  306 (327)
Q Consensus       295 ~~~~~~gk~vv~  306 (327)
                      .++...+|+++.
T Consensus       311 ~~~~~~~k~vv~  322 (323)
T TIGR02823       311 LAGQHRGRTVVD  322 (323)
T ss_pred             hCCCccceEEEe
Confidence            999888899875

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-32  Score=248.60  Aligned_cols=303  Identities=33%  Similarity=0.432  Sum_probs=244.7

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++..++.+..+++.+.+.|.+.+++|+||+.++++|++|++.+.+..+ ...+|.++|||++|+|+.+|+++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            8999998666666688988888889999999999999999999998877543 234578899999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-H
Q 020320           81 TGDEVYGNIQ------------DFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-K  142 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~  142 (327)
                      +||+|++...            ..+.|..     ....|++++|++++.+.++++|+++++.+++.+++++.++|+++ +
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~  160 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT  160 (342)
T ss_pred             CCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence            9999998621            1222222     12468899999999999999999999999999999999999997 4


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEE
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVL  216 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v  216 (327)
                      ..++.++++++|+|+++.+|++++++++.+ |.+++.+++++++.+.+..++.+.+++....++...+      +++|++
T Consensus       161 ~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  239 (342)
T cd08266         161 RARLRPGETVLVHGAGSGVGSAAIQIAKLF-GATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVV  239 (342)
T ss_pred             hcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEE
Confidence            688899999999998899999999999998 9999888888888888888888877765554433321      369999


Q ss_pred             EeCCCC--chhhhhhhcCCCcEEEeeCCCCCCce------------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCccc
Q 020320          217 YDTIGD--CKNSFVVAKDNAPIVDITWPPSHPRA------------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPY  282 (327)
Q Consensus       217 ~d~~g~--~~~~~~~l~~~g~~v~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~  282 (327)
                      ++++|.  ....+++++++|+++.++........            +..........+.+++++++++.+.+.  +++.|
T Consensus       240 i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~  317 (342)
T cd08266         240 VEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPV--IDSVF  317 (342)
T ss_pred             EECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcccc--eeeeE
Confidence            999984  36788999999999998754321110            111112234678899999999998753  57889


Q ss_pred             chhhHHHHHHHHHhCCCCceEEEEe
Q 020320          283 KFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       283 ~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      ++++++++++.+.++...+|+++.+
T Consensus       318 ~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         318 PLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             cHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999998888888998753

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=3.2e-33  Score=251.23  Aligned_cols=298  Identities=20%  Similarity=0.307  Sum_probs=226.7

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC-CCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++..+++++++.+++.|.|.+.++||+||+.++++|++|.....+.. ....+|.++|||++|+|++.|  +++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            899999998877789999999999999999999999999999987654211 123458889999999999964  57799


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh---cCCC-CCCEEEEEc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT---AGFK-TGQTIFIVG  156 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~---~~~~-~~~~vlI~g  156 (327)
                      +||+|++.....    +....|+|++|++++.+.++++|+++++++++.+++++.|||+++..   .... .+++|+|+|
T Consensus        79 ~Gd~V~~~~~~~----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g  154 (326)
T cd08289          79 PGDEVIVTSYDL----GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTG  154 (326)
T ss_pred             CCCEEEEccccc----CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEc
Confidence            999999875211    11246899999999999999999999999999999999999988742   3333 478999999


Q ss_pred             CCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh--h--ccCccEEEeCCCCc--hhhhhhh
Q 020320          157 GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED--I--EEKFDVLYDTIGDC--KNSFVVA  230 (327)
Q Consensus       157 a~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--~--~~~~d~v~d~~g~~--~~~~~~l  230 (327)
                      ++|.+|++++++|+++ |++++++++++++++.++++|++++++.++.....  .  .+++|+++|++|..  ...+.++
T Consensus       155 ~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l  233 (326)
T cd08289         155 ATGGVGSLAVSILAKL-GYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTL  233 (326)
T ss_pred             CCchHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHHHh
Confidence            8899999999999999 99999899999999999999999888765432111  1  14699999999843  6788999


Q ss_pred             cCCCcEEEeeCCCCCCce------------eeEE-eecC-HHHHHHHHhHHHCCCcee---eeCCCcccchhhHHHHHHH
Q 020320          231 KDNAPIVDITWPPSHPRA------------IYSS-LTVS-GEILEKLRPFIESGKLKA---QIDPTGPYKFKDVIEAFRY  293 (327)
Q Consensus       231 ~~~g~~v~~g~~~~~~~~------------~~~~-~~~~-~~~~~~~~~l~~~g~~~~---~~~~~~~~~~~~i~~a~~~  293 (327)
                      +++|+++.+|........            +... .... ......+++.+.. .+.+   ....++.|+++++++||+.
T Consensus       234 ~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~  312 (326)
T cd08289         234 QYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQ  312 (326)
T ss_pred             hcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHH
Confidence            999999999854211100            0111 0111 1122233333322 2221   0123789999999999999


Q ss_pred             HHhCCCCceEEEEe
Q 020320          294 LETGRARGKVVISA  307 (327)
Q Consensus       294 ~~~~~~~gk~vv~~  307 (327)
                      +.++...+|+++++
T Consensus       313 ~~~~~~~gkvvv~~  326 (326)
T cd08289         313 ILQGRVTGRTVVKL  326 (326)
T ss_pred             HhcCcccceEEEeC
Confidence            99998889998763

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.7e-32  Score=247.31  Aligned_cols=301  Identities=33%  Similarity=0.437  Sum_probs=244.9

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++...+..+.+++.+.+.|.+++++++|++.++++|++|++...+.++ ...+|.++|||++|+|+++|+++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            8999999876556699999888889999999999999999999998877653 234678899999999999999999999


Q ss_pred             CCCEEEEeccc------cccc-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCC
Q 020320           81 TGDEVYGNIQD------FNAE-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKT  148 (327)
Q Consensus        81 ~Gd~V~~~~~~------~~~~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~  148 (327)
                      +||+|++....      +..|     .+.+..|+|++|+.++.++++++|+++++.+++.++..+.+||+++. ...+++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~  160 (336)
T cd08276          81 VGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKP  160 (336)
T ss_pred             CCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCC
Confidence            99999986410      1111     11223688999999999999999999999999999999999999985 578999


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC-CChhhhc------cCccEEEeCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK-TKYEDIE------EKFDVLYDTIG  221 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~------~~~d~v~d~~g  221 (327)
                      |++++|+| +|++|++++++++++ |+++++++.++++.+.+.++|.+++++... .++...+      +++|+++|+++
T Consensus       161 g~~vli~g-~g~~g~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~  238 (336)
T cd08276         161 GDTVLVQG-TGGVSLFALQFAKAA-GARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGG  238 (336)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCC
Confidence            99999996 899999999999999 999999889989999998899999887665 4443322      47999999987


Q ss_pred             C--chhhhhhhcCCCcEEEeeCCCCCCc----------e--eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhH
Q 020320          222 D--CKNSFVVAKDNAPIVDITWPPSHPR----------A--IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDV  287 (327)
Q Consensus       222 ~--~~~~~~~l~~~g~~v~~g~~~~~~~----------~--~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i  287 (327)
                      .  ...++.+++++|+++.+|.......          .  +........+.+++++++++++.+.+.  .++.|+++++
T Consensus       239 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~  316 (336)
T cd08276         239 PGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPV--IDRVFPFEEA  316 (336)
T ss_pred             hHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcccc--cCcEEeHHHH
Confidence            4  3678899999999999875432110          0  111111235678999999999888754  4688999999


Q ss_pred             HHHHHHHHhCCCCceEEEE
Q 020320          288 IEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       288 ~~a~~~~~~~~~~gk~vv~  306 (327)
                      +++|+.+.++...+|++++
T Consensus       317 ~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         317 KEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             HHHHHHHHhCCCCceEEEe
Confidence            9999999988888898875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=8.6e-33  Score=249.88  Aligned_cols=296  Identities=21%  Similarity=0.318  Sum_probs=229.4

Q ss_pred             EecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhc-CCCCC--CCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320            6 YYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFP--SDFPAVPGCDMAGIVVAKGTSVTKFNTG   82 (327)
Q Consensus         6 v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~-~~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~G   82 (327)
                      +++.++.   +.+.+.|.|.+++++|+||+.++++|++|+...+ +.++.  ..+|.++|||++|+|+++|++++++++|
T Consensus         2 ~~~~~~~---~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~G   78 (339)
T cd08232           2 VIHAAGD---LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPG   78 (339)
T ss_pred             eeccCCc---eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCC
Confidence            4555554   9999999999999999999999999999998763 32221  2357789999999999999999999999


Q ss_pred             CEEEEecc-cc-----------cccCc----------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHH
Q 020320           83 DEVYGNIQ-DF-----------NAEGK----------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG  140 (327)
Q Consensus        83 d~V~~~~~-~~-----------~~~~~----------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~  140 (327)
                      |+|++... .+           +.|..          ....|+|++|++++.++++++|+++++++++. +.++.++|++
T Consensus        79 d~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~  157 (339)
T cd08232          79 QRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHA  157 (339)
T ss_pred             CEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHH
Confidence            99987421 01           11111          01468999999999999999999999998875 5677889999


Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh---ccCccEE
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDVL  216 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v  216 (327)
                      +......++++|+|.| +|.+|++++++|+++ |. ++++++.++++.++++++|++++++.+...+...   ..++|++
T Consensus       158 l~~~~~~~~~~VLI~g-~g~vG~~~~~lak~~-G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd~v  235 (339)
T cd08232         158 VNRAGDLAGKRVLVTG-AGPIGALVVAAARRA-GAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVV  235 (339)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCccEE
Confidence            8654444999999977 799999999999999 88 6777777888888889999999887665433222   2359999


Q ss_pred             EeCCCC---chhhhhhhcCCCcEEEeeCCCCCCc---------eee-EEeecCHHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320          217 YDTIGD---CKNSFVVAKDNAPIVDITWPPSHPR---------AIY-SSLTVSGEILEKLRPFIESGKLKAQIDPTGPYK  283 (327)
Q Consensus       217 ~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~---------~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~  283 (327)
                      +|+.|.   ....+++++++|+++.++.......         ... .......+.+++++++++++.+++.....+.|+
T Consensus       236 ld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  315 (339)
T cd08232         236 FEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVFP  315 (339)
T ss_pred             EECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEec
Confidence            999984   3678899999999999875331100         000 111133567889999999999875444568899


Q ss_pred             hhhHHHHHHHHHhCCCCceEEEEe
Q 020320          284 FKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       284 ~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +++++++++.+.++...+|+|+.+
T Consensus       316 ~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         316 LEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHHHHHHHHHHhCCCceeEEEeC
Confidence            999999999998888889999864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2e-32  Score=245.54  Aligned_cols=297  Identities=41%  Similarity=0.666  Sum_probs=241.9

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||+++++.++.++.+.+++.+.|.+.+++|+|++.++++|++|+....+.+. ....|.++|||++|+|+.+|+++..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            8999999988777788988888889999999999999999999988776542 233477899999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g  159 (327)
                      +||+|+++..+..     ...|+|++|+.++..+++++|+++++..++.++..+.+||+++ +..++.++++++|+|++|
T Consensus        81 ~Gd~V~~~~~~~~-----~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~  155 (326)
T cd08272          81 VGDEVYGCAGGLG-----GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAG  155 (326)
T ss_pred             CCCEEEEccCCcC-----CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC
Confidence            9999998753211     1358899999999999999999999999998899999999997 568899999999999999


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      .+|++++++++.+ |.+++.++++ ++.+.++++|.+.+++.... +.+.+      +++|+++|++|+.  ...+.+++
T Consensus       156 ~~g~~~~~~a~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~  232 (326)
T cd08272         156 GVGHVAVQLAKAA-GARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVA  232 (326)
T ss_pred             cHHHHHHHHHHHc-CCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhc
Confidence            9999999999999 9999888877 88888888999888876554 44322      3699999998753  66789999


Q ss_pred             CCCcEEEeeCCCCCC------cee-eEEee-----c-------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320          232 DNAPIVDITWPPSHP------RAI-YSSLT-----V-------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR  292 (327)
Q Consensus       232 ~~g~~v~~g~~~~~~------~~~-~~~~~-----~-------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~  292 (327)
                      ++|+++.++.....+      ... +....     .       ..+.+..+++++.++.+.+.+.+ +.|++++++++|+
T Consensus       233 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~  311 (326)
T cd08272         233 LYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDP-RTFPLEEAAAAHA  311 (326)
T ss_pred             cCCEEEEEecCCccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccccc-ceecHHHHHHHHH
Confidence            999999886432100      011 11111     1       14568889999999998754322 8899999999999


Q ss_pred             HHHhCCCCceEEEEe
Q 020320          293 YLETGRARGKVVISA  307 (327)
Q Consensus       293 ~~~~~~~~gk~vv~~  307 (327)
                      .+.++...+|+++++
T Consensus       312 ~~~~~~~~~~vv~~~  326 (326)
T cd08272         312 RLESGSARGKIVIDV  326 (326)
T ss_pred             HHHcCCcccEEEEEC
Confidence            998888788998753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=1.7e-32  Score=244.08  Aligned_cols=293  Identities=42%  Similarity=0.662  Sum_probs=241.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      ||+++++.++..+.+.+.+.+.|.+++++|+||+.++++|++|+..+.+...   ...+|..+|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            8999999888766678888888889999999999999999999998876542   3345888999999999999999999


Q ss_pred             CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcC
Q 020320           79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGG  157 (327)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga  157 (327)
                      +++||+|+++...       ...|+|++|+.++..+++++|+++++..++.++..+.++++++.. ..+.++++++|+|+
T Consensus        81 ~~~G~~V~~~~~~-------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~  153 (309)
T cd05289          81 FKVGDEVFGMTPF-------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGA  153 (309)
T ss_pred             CCCCCEEEEccCC-------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecC
Confidence            9999999987410       125899999999999999999999999999889899999999865 55899999999998


Q ss_pred             CchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh--hccCccEEEeCCCCc--hhhhhhhcCC
Q 020320          158 AGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED--IEEKFDVLYDTIGDC--KNSFVVAKDN  233 (327)
Q Consensus       158 ~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--~~~~~d~v~d~~g~~--~~~~~~l~~~  233 (327)
                      +|.+|++++++++.. |.++++++.++ +.+.++++|.+.+++....++..  ..+++|++++++|+.  ..++.+++++
T Consensus       154 ~g~~g~~~~~~a~~~-g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~  231 (309)
T cd05289         154 AGGVGSFAVQLAKAR-GARVIATASAA-NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKPG  231 (309)
T ss_pred             CchHHHHHHHHHHHc-CCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchHHHHHHHHHHhcC
Confidence            899999999999998 99988888777 88888889988888766544432  224699999999854  7788999999


Q ss_pred             CcEEEeeCCCCCCc-----e-eeEEeecC--HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          234 APIVDITWPPSHPR-----A-IYSSLTVS--GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       234 g~~v~~g~~~~~~~-----~-~~~~~~~~--~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      |+++.+|.......     . ......+.  .+.+.+++++++++.+.+.  +++.|++++++++|+.+.++...+|+++
T Consensus       232 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         232 GRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPV--VDRVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             cEEEEEcCCCcchhhhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEe--eccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence            99999875433211     1 11111122  6788999999999998754  5789999999999999988877777763

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=1.9e-32  Score=246.75  Aligned_cols=296  Identities=26%  Similarity=0.362  Sum_probs=239.2

Q ss_pred             eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTG   82 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   82 (327)
                      |+++++++|.  .+++.+.|.|.+.+++|+|++.++++|++|+..+.+.+....+|.++|||++|+|+++|++++++++|
T Consensus         1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~G   78 (330)
T cd08245           1 KAAVVHAAGG--PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVG   78 (330)
T ss_pred             CeEEEecCCC--CceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccC
Confidence            6888988854  39999999999999999999999999999999988766444568889999999999999999999999


Q ss_pred             CEEEEec-----c--------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320           83 DEVYGNI-----Q--------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA  144 (327)
Q Consensus        83 d~V~~~~-----~--------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~  144 (327)
                      |+|+...     +        ..+.|.     .....|+|++|+.++.++++++|+++++.+++.++..+.+||+++...
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~~  158 (330)
T cd08245          79 DRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDA  158 (330)
T ss_pred             CEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHhh
Confidence            9998421     1        111121     112468999999999999999999999999998988999999999778


Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh-hccCccEEEeCCCC-
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED-IEEKFDVLYDTIGD-  222 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~~~~d~v~d~~g~-  222 (327)
                      ++.++++++|+| +|.+|++++++|+.+ |.+++++++++++.+.++++|++.+++........ ..+++|+++++++. 
T Consensus       159 ~~~~~~~vlI~g-~g~iG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~  236 (330)
T cd08245         159 GPRPGERVAVLG-IGGLGHLAVQYARAM-GFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVTVVSG  236 (330)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEECCCcH
Confidence            899999999997 788999999999999 99999989999999999999998888765433322 22479999999764 


Q ss_pred             --chhhhhhhcCCCcEEEeeCCCCCCce------------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHH
Q 020320          223 --CKNSFVVAKDNAPIVDITWPPSHPRA------------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVI  288 (327)
Q Consensus       223 --~~~~~~~l~~~g~~v~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~  288 (327)
                        ...++++++++|+++.++........            +..........++++++++.++.+.+.   .+.|++++++
T Consensus       237 ~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~  313 (330)
T cd08245         237 AAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPM---IETFPLDQAN  313 (330)
T ss_pred             HHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcce---EEEEcHHHHH
Confidence              36788999999999998753211110            111111145778899999999998753   4789999999


Q ss_pred             HHHHHHHhCCCCceEEE
Q 020320          289 EAFRYLETGRARGKVVI  305 (327)
Q Consensus       289 ~a~~~~~~~~~~gk~vv  305 (327)
                      ++|+.+.++...+|+++
T Consensus       314 ~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         314 EAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHcCCCCcceeC
Confidence            99999998888888764

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=7.5e-33  Score=232.03  Aligned_cols=279  Identities=25%  Similarity=0.306  Sum_probs=227.6

Q ss_pred             cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEe--CCCCCCCCCCCEEEEeccc
Q 020320           14 EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAK--GTSVTKFNTGDEVYGNIQD   91 (327)
Q Consensus        14 ~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~v--G~~v~~~~~Gd~V~~~~~~   91 (327)
                      +.+++++.++|.+++||||||+.|.+++|..+..++- .+..-.|+-+|...+|.++..  -|+...|++||.|...   
T Consensus        25 d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d-~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~---  100 (340)
T COG2130          25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSD-APSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV---  100 (340)
T ss_pred             CCceeEeccCCCCCcCceEEEEEEeccCHHHeecccC-CcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec---
Confidence            5599999999999999999999999999976655433 234456788888877644443  3567889999999986   


Q ss_pred             ccccCcCCCCCceeeEEEeeccceecCCCCCCHHhh--cccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHH
Q 020320           92 FNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEA--ASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQL  168 (327)
Q Consensus        92 ~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a--a~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~l  168 (327)
                                .+|++|..++.+.+.++++..-+..+  ..+..+..|||.+|. .+.+++|++|+|.+|+|++|..+.|+
T Consensus       101 ----------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQi  170 (340)
T COG2130         101 ----------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQI  170 (340)
T ss_pred             ----------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHH
Confidence                      48999999999999999865433333  245667789999995 68999999999999999999999999


Q ss_pred             HHhhcCCcEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--hhhhhhhcCCCcEEEee
Q 020320          169 AKHFYGASHVVATTSTPKVEFVKE-LGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       169 a~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g  240 (327)
                      ||.. |+++|.+..+++|..++++ +|.|.++|++.+++.+.+     .++|+.||++|+.  +..+..|+.++|+..+|
T Consensus       171 AKlk-G~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG  249 (340)
T COG2130         171 AKLK-GCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCG  249 (340)
T ss_pred             HHhh-CCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeee
Confidence            9988 9999999999999999987 999999999999988865     5899999999864  78889999999999987


Q ss_pred             CCC-C----CC---ce----------eeEEe------ecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHh
Q 020320          241 WPP-S----HP---RA----------IYSSL------TVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLET  296 (327)
Q Consensus       241 ~~~-~----~~---~~----------~~~~~------~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~  296 (327)
                      .-. .    .+   ..          +...+      ....+.++++.+|+++|+|+...  +.+-+++++++||..|.+
T Consensus       250 ~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~  327 (340)
T COG2130         250 AISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLS  327 (340)
T ss_pred             ehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhc
Confidence            421 0    11   00          00111      11246788999999999999876  556689999999999999


Q ss_pred             CCCCceEEEEeCC
Q 020320          297 GRARGKVVISAFP  309 (327)
Q Consensus       297 ~~~~gk~vv~~~~  309 (327)
                      +++.||.|+++.+
T Consensus       328 G~N~GK~vvKv~~  340 (340)
T COG2130         328 GKNFGKLVVKVAD  340 (340)
T ss_pred             CCccceEEEEecC
Confidence            9999999999753

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=1.5e-32  Score=248.57  Aligned_cols=298  Identities=25%  Similarity=0.359  Sum_probs=227.8

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      ||++++.++++  .+++.+.|.|.+.++||+||+.++++|++|++++.+..   ....+|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~   78 (341)
T PRK05396          1 MKALVKLKAEP--GLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG   78 (341)
T ss_pred             CceEEEecCCC--ceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence            79999988774  49999999999999999999999999999998765532   12246778999999999999999999


Q ss_pred             CCCCCEEEEecc------------cccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320           79 FNTGDEVYGNIQ------------DFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF  141 (327)
Q Consensus        79 ~~~Gd~V~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  141 (327)
                      +++||+|++...            ..+.|..     .+..|+|++|+.++.++++++|+++++.+++.+ ..+.++++++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~  157 (341)
T PRK05396         79 FKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTA  157 (341)
T ss_pred             CCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHH
Confidence            999999998621            1122211     124689999999999999999999999888743 4555566655


Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCcc
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFD  214 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d  214 (327)
                      .. ...+|++++|.| +|.+|++++++|+++ |++ ++++..++++.+.++++|++++++.++.++.+.+      +++|
T Consensus       158 ~~-~~~~g~~vlV~~-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d  234 (341)
T PRK05396        158 LS-FDLVGEDVLITG-AGPIGIMAAAVAKHV-GARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFD  234 (341)
T ss_pred             Hc-CCCCCCeEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCC
Confidence            33 346899999987 799999999999998 884 6666678888899999999999887765554432      4799


Q ss_pred             EEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEe-ecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320          215 VLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSL-TVSGEILEKLRPFIESGKLKAQIDPT  279 (327)
Q Consensus       215 ~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~  279 (327)
                      ++||+.|.   ...++.+++++|+++.+|......           ..+.... ....+.+..+++++.++ ++....+.
T Consensus       235 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  313 (341)
T PRK05396        235 VGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPIIT  313 (341)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHheE
Confidence            99999874   367889999999999998543110           0011111 01124456788899888 43222346


Q ss_pred             cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          280 GPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +.|+++++++||+.+.++. .+|+++++
T Consensus       314 ~~~~l~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        314 HRFPIDDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             EEEeHHHHHHHHHHHhcCC-CceEEEec
Confidence            8899999999999998776 78999865

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=3.5e-32  Score=244.28  Aligned_cols=296  Identities=23%  Similarity=0.316  Sum_probs=235.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++..+|+++.+++++.|.|++++++|+||+.++++|++|+....+.++ ...+|.++|||++|+|+.  +++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            8999999988777799999999999999999999999999999998877542 234578899999999998  7778899


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH---hcCCC-CCCEEEEEc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK---TAGFK-TGQTIFIVG  156 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~---~~~~~-~~~~vlI~g  156 (327)
                      +||+|+++..  +.  +....|+|++|++++.++++++|++++.++++.++..++++++++.   ..+.. ++++++|+|
T Consensus        79 ~Gd~V~~~~~--~~--~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g  154 (324)
T cd08288          79 PGDRVVLTGW--GV--GERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTG  154 (324)
T ss_pred             CCCEEEECCc--cC--CCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEEC
Confidence            9999998631  00  0113689999999999999999999999999999888888887764   44555 678999999


Q ss_pred             CCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh--hhc-cCccEEEeCCCC--chhhhhhhc
Q 020320          157 GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE--DIE-EKFDVLYDTIGD--CKNSFVVAK  231 (327)
Q Consensus       157 a~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--~~~-~~~d~v~d~~g~--~~~~~~~l~  231 (327)
                      ++|.+|++++++|+++ |+++++++.++++.+.++++|++++++.++....  ... .++|.++|+++.  ....+..++
T Consensus       155 a~g~vg~~~~~~A~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  233 (324)
T cd08288         155 AAGGVGSVAVALLARL-GYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHTLANVLAQTR  233 (324)
T ss_pred             CCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHHHHHHHHHHhc
Confidence            8899999999999999 9999999999999999999999999887653221  111 357899999985  256677888


Q ss_pred             CCCcEEEeeCCCCC--C--------ceee-EEe---e----cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHH
Q 020320          232 DNAPIVDITWPPSH--P--------RAIY-SSL---T----VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRY  293 (327)
Q Consensus       232 ~~g~~v~~g~~~~~--~--------~~~~-~~~---~----~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~  293 (327)
                      .+|+++.+|.....  +        .... ...   .    ...+.++.+++++.++.+++.   .+.+++++++++|+.
T Consensus       234 ~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~~a~~~  310 (324)
T cd08288         234 YGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEAL---TREIPLADVPDAAEA  310 (324)
T ss_pred             CCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcccc---ceeecHHHHHHHHHH
Confidence            88999888753210  0        0000 111   0    113457778888888888652   589999999999999


Q ss_pred             HHhCCCCceEEEEe
Q 020320          294 LETGRARGKVVISA  307 (327)
Q Consensus       294 ~~~~~~~gk~vv~~  307 (327)
                      +.+++..+|+++.+
T Consensus       311 ~~~~~~~~~vvv~~  324 (324)
T cd08288         311 ILAGQVRGRVVVDV  324 (324)
T ss_pred             HhcCCccCeEEEeC
Confidence            99999889998763

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=2e-32  Score=247.95  Aligned_cols=294  Identities=27%  Similarity=0.392  Sum_probs=229.4

Q ss_pred             EEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCC-CC--CCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            5 WYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRP-LF--PSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         5 ~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~-~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      .++++++.   +.+++.|.|.+.+++|+||+.++++|++|++.+.+. .+  ...+|.++|+|++|+|+++|++++++++
T Consensus         2 ~~~~~~~~---~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~   78 (343)
T cd05285           2 AVLHGPGD---LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKV   78 (343)
T ss_pred             ceEecCCc---eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCC
Confidence            45666644   999999999999999999999999999999876422 11  1245778999999999999999999999


Q ss_pred             CCEEEEecc------------cccccCc------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320           82 GDEVYGNIQ------------DFNAEGK------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT  143 (327)
Q Consensus        82 Gd~V~~~~~------------~~~~~~~------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~  143 (327)
                      ||+|++.+.            ..+.|..      ....|+|++|++++.++++++|+++++.+++.+ ..+.+||+++..
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~~~  157 (343)
T cd05285          79 GDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHACRR  157 (343)
T ss_pred             CCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHHHh
Confidence            999986321            1111110      113689999999999999999999999998866 467789999878


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCCh---hh----hc--cCc
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKY---ED----IE--EKF  213 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~----~~--~~~  213 (327)
                      ++++++++++|.| +|.+|++++++|+++ |++ ++++.+++++.++++++|++++++.+...+   .+    ..  +++
T Consensus       158 ~~~~~g~~vlI~g-~g~vG~~a~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  235 (343)
T cd05285         158 AGVRPGDTVLVFG-AGPIGLLTAAVAKAF-GATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGP  235 (343)
T ss_pred             cCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence            9999999999987 799999999999998 887 777778888999999999999988766543   22    11  359


Q ss_pred             cEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320          214 DVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPT  279 (327)
Q Consensus       214 d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~  279 (327)
                      |+++|++|.   ....+.+++++|+++.+|.......           .+.. .....+.++.++++++++.+.+.....
T Consensus       236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~  314 (343)
T cd05285         236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRG-VFRYANTYPTAIELLASGKVDVKPLIT  314 (343)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEE-eccChHHHHHHHHHHHcCCCCchHhEE
Confidence            999999985   3678899999999999875432110           1111 112236788999999999876433346


Q ss_pred             cccchhhHHHHHHHHHhCC-CCceEEE
Q 020320          280 GPYKFKDVIEAFRYLETGR-ARGKVVI  305 (327)
Q Consensus       280 ~~~~~~~i~~a~~~~~~~~-~~gk~vv  305 (327)
                      +.|+++++++|++.+.++. ..+|+++
T Consensus       315 ~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         315 HRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             EEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            7899999999999998775 4589887

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.1e-32  Score=245.34  Aligned_cols=288  Identities=28%  Similarity=0.407  Sum_probs=237.1

Q ss_pred             eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      |++++...+.++.+++.+.+.|.+.+++|+|++.++++|++|+....+..+. ..+|.++|||++|+|+.+|++++.+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV   81 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence            7899999888878999999999999999999999999999999988776532 346889999999999999999999999


Q ss_pred             CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCch
Q 020320           82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGG  160 (327)
Q Consensus        82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~  160 (327)
                      ||+|.++.          ..|+|++|++++.+.++++|+++++.+++.++..+.++|+++. ...+.++++++|+|++|.
T Consensus        82 Gd~V~~~~----------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~  151 (331)
T cd08273          82 GDRVAALT----------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGG  151 (331)
T ss_pred             CCEEEEeC----------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcH
Confidence            99999975          2489999999999999999999999999999999999999985 478999999999998899


Q ss_pred             HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hccCccEEEeCCCCc--hhhhhhhcCCCc
Q 020320          161 VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED---IEEKFDVLYDTIGDC--KNSFVVAKDNAP  235 (327)
Q Consensus       161 ~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~~~~d~v~d~~g~~--~~~~~~l~~~g~  235 (327)
                      +|++++++++.+ |++++.++. +++.+.++++|++.+ +....++..   ..+++|++++++|+.  ..++.+++++|+
T Consensus       152 ig~~~~~~a~~~-g~~v~~~~~-~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~  228 (331)
T cd08273         152 VGQALLELALLA-GAEVYGTAS-ERNHAALRELGATPI-DYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPGGT  228 (331)
T ss_pred             HHHHHHHHHHHc-CCEEEEEeC-HHHHHHHHHcCCeEE-cCCCcchhhhhccCCCceEEEECCchHHHHHHHHHhcCCCE
Confidence            999999999998 998888887 888888888997643 333322221   124799999999854  677899999999


Q ss_pred             EEEeeCCCCCCc-------------------ee------e-EEeec--------CHHHHHHHHhHHHCCCceeeeCCCcc
Q 020320          236 IVDITWPPSHPR-------------------AI------Y-SSLTV--------SGEILEKLRPFIESGKLKAQIDPTGP  281 (327)
Q Consensus       236 ~v~~g~~~~~~~-------------------~~------~-~~~~~--------~~~~~~~~~~l~~~g~~~~~~~~~~~  281 (327)
                      ++.+|.....+.                   ..      . .....        ..+.+++++++++++.+.+.  .++.
T Consensus       229 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~--~~~~  306 (331)
T cd08273         229 LVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPK--IAKR  306 (331)
T ss_pred             EEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCC--cceE
Confidence            999875432111                   00      0 01111        13567889999999998753  5788


Q ss_pred             cchhhHHHHHHHHHhCCCCceEEE
Q 020320          282 YKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       282 ~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      |++++++++|+.+.++...+|+|+
T Consensus       307 ~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         307 LPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             EcHHHHHHHHHHHHcCCCcceEEe
Confidence            999999999999988888888875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=5.1e-32  Score=242.22  Aligned_cols=291  Identities=32%  Similarity=0.490  Sum_probs=239.1

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++.+++.++.+++.+.+.|.+.+++|+||+.++++|++|+....+.++ ...+|.++|||++|+|+++|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            8999999888777788988888889999999999999999999988876552 334678899999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g  159 (327)
                      +||+|+++.          ..|+|++|+.++.++++++|+++++.+++.++..+.++|+++. ...+.++++++|+|++|
T Consensus        81 ~Gd~V~~~~----------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~  150 (323)
T cd05276          81 VGDRVCALL----------AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGAS  150 (323)
T ss_pred             CCCEEEEec----------CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcC
Confidence            999999874          2589999999999999999999999999999999999999985 57889999999999999


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      .+|++++++++.+ |++++++.+++++.+.++++|.+.+++....++....      +++|+++++.|..  ...+.+++
T Consensus       151 ~ig~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~  229 (323)
T cd05276         151 GVGTAAIQLAKAL-GARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALA  229 (323)
T ss_pred             hHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhc
Confidence            9999999999999 9998888888888888888998888876654443322      4799999999853  66788999


Q ss_pred             CCCcEEEeeCCCCCC--c----------eeeEEe-ec---------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHH
Q 020320          232 DNAPIVDITWPPSHP--R----------AIYSSL-TV---------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIE  289 (327)
Q Consensus       232 ~~g~~v~~g~~~~~~--~----------~~~~~~-~~---------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~  289 (327)
                      ++|+++.++......  .          .+.... ..         ....+.++++++.++++.+.  .++.|+++++++
T Consensus       230 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  307 (323)
T cd05276         230 PDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPV--IDKVFPLEEAAE  307 (323)
T ss_pred             cCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHHHH
Confidence            999999887532111  0          001110 00         11345778889999988653  578899999999


Q ss_pred             HHHHHHhCCCCceEEE
Q 020320          290 AFRYLETGRARGKVVI  305 (327)
Q Consensus       290 a~~~~~~~~~~gk~vv  305 (327)
                      +++.+.++...+|+++
T Consensus       308 a~~~~~~~~~~~kvv~  323 (323)
T cd05276         308 AHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHHhCCCcceEeC
Confidence            9999988887788763

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=3.5e-32  Score=246.13  Aligned_cols=299  Identities=26%  Similarity=0.372  Sum_probs=230.5

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      ||+++++.++.  .+.+.+.+.|.+.+++++||+.++++|++|+..+.+..   ....+|.++|||++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~   78 (341)
T cd05281           1 MKAIVKTKAGP--GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR   78 (341)
T ss_pred             CcceEEecCCC--ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence            89999998774  49999999999999999999999999999988754421   12235678999999999999999999


Q ss_pred             CCCCCEEEEeccc------------ccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320           79 FNTGDEVYGNIQD------------FNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF  141 (327)
Q Consensus        79 ~~~Gd~V~~~~~~------------~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  141 (327)
                      +++||+|+++...            .+.|..     ....|+|++|++++.+.++++|++++.+.+ .++..+.++++++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~  157 (341)
T cd05281          79 VKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTV  157 (341)
T ss_pred             CCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHH
Confidence            9999999986211            111100     113689999999999999999999988554 5566777888877


Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hc--cCccE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYED---IE--EKFDV  215 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~--~~~d~  215 (327)
                      . ....++++|+|.| +|.+|++++++|+.+ |. +++++.+++++...++++|++++++.+..++..   ..  +++|+
T Consensus       158 ~-~~~~~g~~vlV~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~  234 (341)
T cd05281         158 L-AGDVSGKSVLITG-CGPIGLMAIAVAKAA-GASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDV  234 (341)
T ss_pred             H-hcCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCE
Confidence            5 4557899999987 799999999999998 88 576666788888888999999888766555431   11  47999


Q ss_pred             EEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCc------ee----eEE-e--ecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320          216 LYDTIGDC---KNSFVVAKDNAPIVDITWPPSHPR------AI----YSS-L--TVSGEILEKLRPFIESGKLKAQIDPT  279 (327)
Q Consensus       216 v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~------~~----~~~-~--~~~~~~~~~~~~l~~~g~~~~~~~~~  279 (327)
                      +||++|..   ...+.+++++|+++.+|.......      ..    ... .  ....+.+.++++++.++.+.+...+.
T Consensus       235 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~  314 (341)
T cd05281         235 VLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVIT  314 (341)
T ss_pred             EEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheE
Confidence            99999743   677899999999998874321100      00    000 0  11235678899999999987543456


Q ss_pred             cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          280 GPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +.+++++++++|+.+.++. .+|+++.+
T Consensus       315 ~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         315 HKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             EEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            7889999999999999888 89998764

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=6.2e-32  Score=246.55  Aligned_cols=298  Identities=22%  Similarity=0.300  Sum_probs=225.3

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      |++.++..+..   +++++.+.|.+.++||+||+.++++|++|++.+.+...   ...+|.++|||++|+|+++|+++++
T Consensus        18 ~~~~~~~~~~~---l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
T PLN02702         18 NMAAWLVGVNT---LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH   94 (364)
T ss_pred             cceEEEecCCc---eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence            45555555544   88999999999999999999999999999998866321   1235778999999999999999999


Q ss_pred             CCCCCEEEEecc------------cccccCc------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHH
Q 020320           79 FNTGDEVYGNIQ------------DFNAEGK------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG  140 (327)
Q Consensus        79 ~~~Gd~V~~~~~------------~~~~~~~------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~  140 (327)
                      +++||+|++...            ..+.|..      .+..|+|++|+.++.+.++++|++++++++++. ..+.++|++
T Consensus        95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~  173 (364)
T PLN02702         95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHA  173 (364)
T ss_pred             CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHH
Confidence            999999987321            1122211      112689999999999999999999999988752 233348888


Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcE-EEEeCCcccHHHHHHcCCCEEEeCC--CCChhhh--------
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH-VVATTSTPKVEFVKELGADKVIDYR--KTKYEDI--------  209 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~-v~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~--------  209 (327)
                      +...++.++++++|+| +|++|++++++|+++ |++. +++..++++.++++++|++.+++..  ..++.+.        
T Consensus       174 ~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  251 (364)
T PLN02702        174 CRRANIGPETNVLVMG-AGPIGLVTMLAARAF-GAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAM  251 (364)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhc
Confidence            8778899999999997 799999999999998 8864 4555677888889999999877543  2333221        


Q ss_pred             ccCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceee
Q 020320          210 EEKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQ  275 (327)
Q Consensus       210 ~~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~  275 (327)
                      .+++|+++|++|.   ...++++++++|+++.+|......           ..+... ......++.++++++++++.+.
T Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~l~~~  330 (364)
T PLN02702        252 GGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGV-FRYRNTWPLCLEFLRSGKIDVK  330 (364)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEe-ccChHHHHHHHHHHHcCCCCch
Confidence            1369999999984   378899999999999987532110           011111 1224578899999999998643


Q ss_pred             eCCCcccch--hhHHHHHHHHHhCCCCceEEEE
Q 020320          276 IDPTGPYKF--KDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       276 ~~~~~~~~~--~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      ..+++.|++  +++++|++.+.+++..+|+++.
T Consensus       331 ~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        331 PLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            334577554  8999999999888878899884

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=1.2e-31  Score=240.17  Aligned_cols=298  Identities=31%  Similarity=0.496  Sum_probs=243.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++..++.+..+.+.+.|.|.+.+++|+|++.++++|++|+....+.++ ...+|.++|||++|+|+++|+++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            7899998877666688999999999999999999999999999988776543 335688899999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g  159 (327)
                      +||+|++...+.     ....|++++|+.++.+.++++|+++++.+++.++.++.++|+++.. .++.++++++|+|+++
T Consensus        81 ~Gd~v~~~~~~~-----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~  155 (325)
T cd08253          81 VGDRVWLTNLGW-----GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSG  155 (325)
T ss_pred             CCCEEEEecccc-----CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCc
Confidence            999999875311     1136899999999999999999999999999999999999999864 8899999999999999


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      .+|++++++++.+ |.+++++++++++.+.+.++|++++++....++....      +++|++++++|..  ...+++++
T Consensus       156 ~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~  234 (325)
T cd08253         156 AVGHAAVQLARWA-GARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLA  234 (325)
T ss_pred             hHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhC
Confidence            9999999999998 9999998888888888889999988877665544321      4799999999854  56778999


Q ss_pred             CCCcEEEeeCCCC---C------C--ceeeEE--eecC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHH
Q 020320          232 DNAPIVDITWPPS---H------P--RAIYSS--LTVS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYL  294 (327)
Q Consensus       232 ~~g~~v~~g~~~~---~------~--~~~~~~--~~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~  294 (327)
                      ++|+++.++....   .      .  ..+...  ....    .+.++.+.+++.++.+++.  .++.|++++++++++.+
T Consensus       235 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~  312 (325)
T cd08253         235 PGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHEAV  312 (325)
T ss_pred             CCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHH
Confidence            9999999875320   0      0  001111  1111    2345667778888888653  47889999999999999


Q ss_pred             HhCCCCceEEEEe
Q 020320          295 ETGRARGKVVISA  307 (327)
Q Consensus       295 ~~~~~~gk~vv~~  307 (327)
                      .++...+|+++++
T Consensus       313 ~~~~~~~kvv~~~  325 (325)
T cd08253         313 ESGGAIGKVVLDP  325 (325)
T ss_pred             HcCCCcceEEEeC
Confidence            9888888988753

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=8.1e-32  Score=244.79  Aligned_cols=297  Identities=33%  Similarity=0.513  Sum_probs=227.0

Q ss_pred             eeEEecccCCCcceEEeeccCCC-CCCCeEEEEEEEEeeChHhHhhhcCCCCCC-CCCCcccccccEEEEEeCCCCC-CC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPT-PQHDQLLVQVRAAALNPIDSKRRQRPLFPS-DFPAVPGCDMAGIVVAKGTSVT-KF   79 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~-~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~-~~p~~~G~e~~G~V~~vG~~v~-~~   79 (327)
                      |++++..++.+..++..++|.|. +.+++|+||+.++++|++|+....+..... .+|.++|||++|+|+++|++++ ++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW   81 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence            68899888876334444445543 499999999999999999998775422211 2377899999999999999998 89


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeecc----ceecCCCCCCHHhhcccchHHHHHHHHHHh-c-CCCCCCEEE
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEES----LIAKKPKNISFEEAASLPLAVQTAIEGFKT-A-GFKTGQTIF  153 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~-~~~~~~~vl  153 (327)
                      ++||+|+++.....     ...|+|++|++++..    .++++|+++++.+++.++.++.+||+++.. . ++++|++++
T Consensus        82 ~~Gd~V~~~~~~~~-----~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vl  156 (352)
T cd08247          82 KVGDEVCGIYPHPY-----GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVL  156 (352)
T ss_pred             CCCCEEEEeecCCC-----CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEE
Confidence            99999998753211     136899999999987    789999999999999999999999999965 4 699999999


Q ss_pred             EEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC---h-hhh------ccCccEEEeCCCCc
Q 020320          154 IVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK---Y-EDI------EEKFDVLYDTIGDC  223 (327)
Q Consensus       154 I~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~---~-~~~------~~~~d~v~d~~g~~  223 (327)
                      |+|+++.+|++++++|+.+++.+.++.+.++++...++++|++++++.++.+   + .+.      .+++|+++|++|..
T Consensus       157 I~ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~  236 (352)
T cd08247         157 VLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGY  236 (352)
T ss_pred             EECCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCH
Confidence            9999899999999999987455344444455666677899999988765544   2 221      24799999999862


Q ss_pred             ---hhhhhhhc---CCCcEEEeeCCCC---CC-------------ceee-----EE-------eecCHHHHHHHHhHHHC
Q 020320          224 ---KNSFVVAK---DNAPIVDITWPPS---HP-------------RAIY-----SS-------LTVSGEILEKLRPFIES  269 (327)
Q Consensus       224 ---~~~~~~l~---~~g~~v~~g~~~~---~~-------------~~~~-----~~-------~~~~~~~~~~~~~l~~~  269 (327)
                         ..++++++   ++|+++.++....   ..             ..+.     ..       .....+.++.+++++.+
T Consensus       237 ~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (352)
T cd08247         237 DLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIAD  316 (352)
T ss_pred             HHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhC
Confidence               56788889   9999998642110   00             0000     00       00113568889999999


Q ss_pred             CCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320          270 GKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS  306 (327)
Q Consensus       270 g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~  306 (327)
                      +.+.+.  +++.++++++++||+.+.++...+|++++
T Consensus       317 ~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  351 (352)
T cd08247         317 GKVKPP--IDSVYPFEDYKEAFERLKSNRAKGKVVIK  351 (352)
T ss_pred             CCeEee--eccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence            998764  47899999999999999988888999875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.3e-31  Score=238.80  Aligned_cols=294  Identities=34%  Similarity=0.489  Sum_probs=239.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++.++++.+.+.+.+.|.|++.+++|+||+.++++|++|+....+......+|.++|||++|+|+.+|++++.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            89999999884335999999999999999999999999999999887765533234778999999999999999999999


Q ss_pred             CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCch
Q 020320           82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGG  160 (327)
Q Consensus        82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~  160 (327)
                      ||+|+++..       ....|+|++|+.++.+.++++|++++...++.++..+.++++++. ..++.+|++++|+|++|.
T Consensus        81 Gd~V~~~~~-------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~  153 (325)
T cd08271          81 GDRVAYHAS-------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGG  153 (325)
T ss_pred             CCEEEeccC-------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccH
Confidence            999998741       112589999999999999999999999999989999999999985 578899999999998899


Q ss_pred             HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh------ccCccEEEeCCCCc--hhhhhhhcC
Q 020320          161 VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI------EEKFDVLYDTIGDC--KNSFVVAKD  232 (327)
Q Consensus       161 ~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~d~v~d~~g~~--~~~~~~l~~  232 (327)
                      +|+++++++++. |++++.++ ++++.+.+.++|++.+++.....+...      .+++|++++++++.  ...+.++++
T Consensus       154 ig~~~~~~a~~~-g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~  231 (325)
T cd08271         154 VGSFAVQLAKRA-GLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAF  231 (325)
T ss_pred             HHHHHHHHHHHc-CCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhcc
Confidence            999999999998 99888776 667778888899988887665544332      14699999999853  567899999


Q ss_pred             CCcEEEeeCCCCCC-------ceeeEEee--------------cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHH
Q 020320          233 NAPIVDITWPPSHP-------RAIYSSLT--------------VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAF  291 (327)
Q Consensus       233 ~g~~v~~g~~~~~~-------~~~~~~~~--------------~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~  291 (327)
                      +|+++.++......       ...+....              ...+.+.++++++.++.+.+.  .++.|+++++++++
T Consensus       232 ~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~  309 (325)
T cd08271         232 NGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEAL  309 (325)
T ss_pred             CCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHH
Confidence            99999886432110       00111111              112346778899999998753  46889999999999


Q ss_pred             HHHHhCCCCceEEEE
Q 020320          292 RYLETGRARGKVVIS  306 (327)
Q Consensus       292 ~~~~~~~~~gk~vv~  306 (327)
                      +.+.++...+|++++
T Consensus       310 ~~~~~~~~~~kiv~~  324 (325)
T cd08271         310 RALKDRHTRGKIVVT  324 (325)
T ss_pred             HHHHcCCccceEEEE
Confidence            999988888898875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.7e-31  Score=238.55  Aligned_cols=291  Identities=32%  Similarity=0.415  Sum_probs=239.1

Q ss_pred             eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTG   82 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   82 (327)
                      |++.+..++....+.+.+.+.+.+.+++|+|++.++++|++|++...+..+. .+|.++|||++|+|+.+|++++++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G   79 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG   79 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence            5777777777667888888888899999999999999999999888765432 457789999999999999999999999


Q ss_pred             CEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchH
Q 020320           83 DEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGV  161 (327)
Q Consensus        83 d~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~  161 (327)
                      |+|+++.          ..|++++|+.++.+.++++|++++..+++.++..+.++|+++. ..++.++++++|+|++|.+
T Consensus        80 ~~V~~~~----------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~  149 (320)
T cd05286          80 DRVAYAG----------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGV  149 (320)
T ss_pred             CEEEEec----------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Confidence            9999873          1589999999999999999999999999988888899999985 5889999999999999999


Q ss_pred             HHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCC
Q 020320          162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDN  233 (327)
Q Consensus       162 G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~  233 (327)
                      |++++++++.+ |+++++++.++++.+.++++|++++++.....+...+      +++|++++++++.  ...+.+++++
T Consensus       150 g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~  228 (320)
T cd05286         150 GLLLTQWAKAL-GATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPR  228 (320)
T ss_pred             HHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccC
Confidence            99999999999 9999998899899999999999988876654443322      3699999998743  6778999999


Q ss_pred             CcEEEeeCCCCCC----------cee-eEEe-----ecC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHH
Q 020320          234 APIVDITWPPSHP----------RAI-YSSL-----TVS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRY  293 (327)
Q Consensus       234 g~~v~~g~~~~~~----------~~~-~~~~-----~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~  293 (327)
                      |+++.+|......          ... +...     ...    .+.+.++++++.++.+.+.  .++.|++++++++|+.
T Consensus       229 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~  306 (320)
T cd05286         229 GTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRD  306 (320)
T ss_pred             cEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHH
Confidence            9999987533110          000 1111     111    2445678889999988764  4688999999999999


Q ss_pred             HHhCCCCceEEEEe
Q 020320          294 LETGRARGKVVISA  307 (327)
Q Consensus       294 ~~~~~~~gk~vv~~  307 (327)
                      +.++...+++++.+
T Consensus       307 ~~~~~~~~~vv~~~  320 (320)
T cd05286         307 LESRKTTGKLLLIP  320 (320)
T ss_pred             HHcCCCCceEEEeC
Confidence            99888888988753

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.4e-32  Score=248.50  Aligned_cols=286  Identities=25%  Similarity=0.344  Sum_probs=220.9

Q ss_pred             eEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC------C-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEe
Q 020320           16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL------F-PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGN   88 (327)
Q Consensus        16 l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~------~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   88 (327)
                      ++++++|.|.+++++|+||+.++++|++|++.+.+..      + ...+|.++|||++|+|+++|++++.+++||+|++.
T Consensus        39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~  118 (384)
T cd08265          39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE  118 (384)
T ss_pred             EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence            9999999999999999999999999999998876321      1 13467899999999999999999999999999873


Q ss_pred             ccc------------ccccCc-----CCCCCceeeEEEeeccceecCCCCC-------CHHhhcccchHHHHHHHHHH-h
Q 020320           89 IQD------------FNAEGK-----LKQLGALAEFIVVEESLIAKKPKNI-------SFEEAASLPLAVQTAIEGFK-T  143 (327)
Q Consensus        89 ~~~------------~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~-------~~~~aa~~~~~~~ta~~~l~-~  143 (327)
                      ...            .+.|..     ....|+|++|+.++.++++++|+++       +.. ++.++.++.+||+++. .
T Consensus       119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~  197 (384)
T cd08265         119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR  197 (384)
T ss_pred             CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence            211            111111     1236899999999999999999863       444 5556678889999984 4


Q ss_pred             -cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCC---Chhhhc------cC
Q 020320          144 -AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKT---KYEDIE------EK  212 (327)
Q Consensus       144 -~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~------~~  212 (327)
                       .++++|++|+|+| +|.+|++++++|+.+ |+ ++++++.++++.+.++++|++++++.++.   ++...+      ++
T Consensus       198 ~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~g  275 (384)
T cd08265         198 GGGFRPGAYVVVYG-AGPIGLAAIALAKAA-GASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWG  275 (384)
T ss_pred             cCCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCC
Confidence             6899999999996 899999999999999 88 57777778889999999999998876643   333321      47


Q ss_pred             ccEEEeCCCCc----hhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEe-ecCHHHHHHHHhHHHCCCceeee
Q 020320          213 FDVLYDTIGDC----KNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSL-TVSGEILEKLRPFIESGKLKAQI  276 (327)
Q Consensus       213 ~d~v~d~~g~~----~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~  276 (327)
                      +|+++|++|..    ...+++++++|+++.+|.......           .+.... ......+++++++++++.+++..
T Consensus       276 vDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~  355 (384)
T cd08265         276 ADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTK  355 (384)
T ss_pred             CCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChHH
Confidence            99999999852    567899999999999875421100           011111 11235689999999999998654


Q ss_pred             CCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          277 DPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       277 ~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      +.++.|+++++++|++.+.+. ..+|+++
T Consensus       356 ~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         356 IITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             heEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            457889999999999997554 5677775

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8e-32  Score=240.60  Aligned_cols=276  Identities=23%  Similarity=0.311  Sum_probs=222.3

Q ss_pred             ceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhh-cCCCCC--CCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccc
Q 020320           15 VLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRR-QRPLFP--SDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQD   91 (327)
Q Consensus        15 ~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~-~~~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   91 (327)
                      .+++.+.+.|.+.++||+||+.++++|++|+..+ .+....  ..+|.++|||++|+|+++|++++++++||+|+++.  
T Consensus         6 ~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~--   83 (312)
T cd08269           6 RFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS--   83 (312)
T ss_pred             eeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--
Confidence            4999999999999999999999999999999887 664321  22477899999999999999999999999999874  


Q ss_pred             ccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHh
Q 020320           92 FNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKH  171 (327)
Q Consensus        92 ~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~  171 (327)
                               .|+|++|++++.++++++|+++  ..++....++.++++++...+++++++++|+| +|.+|++++++|++
T Consensus        84 ---------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~la~~  151 (312)
T cd08269          84 ---------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRAGKTVAVIG-AGFIGLLFLQLAAA  151 (312)
T ss_pred             ---------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHH
Confidence                     5899999999999999999988  22322236778899998888899999999997 79999999999999


Q ss_pred             hcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCC---chhhhhhhcCCCcEEEeeC
Q 020320          172 FYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       172 ~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~  241 (327)
                      + |++ ++++.+++++.++++++|++++++.+...+.+.+      .++|+++|++|.   ....+++++++|+++.+|.
T Consensus       152 ~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~  230 (312)
T cd08269         152 A-GARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGY  230 (312)
T ss_pred             c-CCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEcc
Confidence            9 998 7777788888888899999988876655544432      479999999974   3778899999999999975


Q ss_pred             CCCCCc------------eeeEEe----ecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCC-CceEE
Q 020320          242 PPSHPR------------AIYSSL----TVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRA-RGKVV  304 (327)
Q Consensus       242 ~~~~~~------------~~~~~~----~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~-~gk~v  304 (327)
                      ....+.            .+....    ....+.+++++++++++++++.....+.|++++++++++.+.+++. ..|++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~  310 (312)
T cd08269         231 HQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGV  310 (312)
T ss_pred             CCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEE
Confidence            431110            001111    1123678999999999999864334678999999999999988864 47877


Q ss_pred             E
Q 020320          305 I  305 (327)
Q Consensus       305 v  305 (327)
                      +
T Consensus       311 ~  311 (312)
T cd08269         311 I  311 (312)
T ss_pred             e
Confidence            5

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.1e-31  Score=236.50  Aligned_cols=289  Identities=43%  Similarity=0.671  Sum_probs=230.6

Q ss_pred             EecccCCCcce--EEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            6 YYEEYGPKEVL--KLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         6 v~~~~~~~~~l--~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      +++..++++.+  ++.+.|.|++.+++|+|++.++++|++|++.+.+.++   ...+|..+|||++|+|+++|+++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~   81 (319)
T cd08267           2 VYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFK   81 (319)
T ss_pred             eeCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCC
Confidence            56667776554  8889999999999999999999999999998876542   233567899999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g  159 (327)
                      +||+|+++...       ...|+|++|+.++.+.++++|++++++.++.+++.+.+||+++.. ..+.++++++|+|++|
T Consensus        82 ~Gd~V~~~~~~-------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g  154 (319)
T cd08267          82 VGDEVFGRLPP-------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASG  154 (319)
T ss_pred             CCCEEEEeccC-------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence            99999987420       125899999999999999999999999999999999999999864 5689999999999889


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hccCccEEEeCCCCc----hhhhhhhcC
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED---IEEKFDVLYDTIGDC----KNSFVVAKD  232 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~~~~d~v~d~~g~~----~~~~~~l~~  232 (327)
                      .+|++++++|+.+ |++++.++.+ ++.+.++++|.+++++....++..   ..+++|++++++|..    ...+..+++
T Consensus       155 ~~g~~~~~la~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~  232 (319)
T cd08267         155 GVGTFAVQIAKAL-GAHVTGVCST-RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKP  232 (319)
T ss_pred             HHHHHHHHHHHHc-CCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCC
Confidence            9999999999999 9988877765 788888999998888765544321   124699999999832    222334999


Q ss_pred             CCcEEEeeCCCCCCce---------------ee-EEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHh
Q 020320          233 NAPIVDITWPPSHPRA---------------IY-SSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLET  296 (327)
Q Consensus       233 ~g~~v~~g~~~~~~~~---------------~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~  296 (327)
                      +|+++.+|........               .. .......+.+.++++++.++.+.+.  +++.|++++++++|+.+.+
T Consensus       233 ~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~i~~a~~~~~~  310 (319)
T cd08267         233 GGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPV--IDSVYPLEDAPEAYRRLKS  310 (319)
T ss_pred             CCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeee--eeeEEcHHHHHHHHHHHhc
Confidence            9999998754321100               00 0111236788999999999998764  4789999999999999988


Q ss_pred             CCCCceEEE
Q 020320          297 GRARGKVVI  305 (327)
Q Consensus       297 ~~~~gk~vv  305 (327)
                      +...+|+++
T Consensus       311 ~~~~~~vvv  319 (319)
T cd08267         311 GRARGKVVI  319 (319)
T ss_pred             CCCCCcEeC
Confidence            877777763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=1.2e-30  Score=233.89  Aligned_cols=292  Identities=31%  Similarity=0.509  Sum_probs=238.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++.+..++....+.+.+.+.|.+.+++++||+.++++|++|+....+.++ ...+|.++|||++|+|+.+|+++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            7899998877766788888877789999999999999999999988776542 234578899999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g  159 (327)
                      +||+|+++.          .+|++++|+.++.++++++|+++++..++.++.++.++|+++ +...+.++++++|+|++|
T Consensus        81 ~Gd~V~~~~----------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~  150 (325)
T TIGR02824        81 VGDRVCALV----------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGAS  150 (325)
T ss_pred             CCCEEEEcc----------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcc
Confidence            999999874          258999999999999999999999999998999999999987 468899999999999999


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      .+|++++++++.+ |++++++.+++++.+.++++|.+.+++.....+....      +++|++++++|..  ...+.+++
T Consensus       151 ~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~  229 (325)
T TIGR02824       151 GIGTTAIQLAKAF-GARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALA  229 (325)
T ss_pred             hHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhc
Confidence            9999999999999 9999988888888888888998887766554443322      3699999999853  66788999


Q ss_pred             CCCcEEEeeCCCCC--C--------cee-eEEee--c---------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHH
Q 020320          232 DNAPIVDITWPPSH--P--------RAI-YSSLT--V---------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIE  289 (327)
Q Consensus       232 ~~g~~v~~g~~~~~--~--------~~~-~~~~~--~---------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~  289 (327)
                      ++|+++.++.....  .        ... +....  .         ..+.+.+++++++++.+.+.  +++.|+++++++
T Consensus       230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~  307 (325)
T TIGR02824       230 LDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDAAQ  307 (325)
T ss_pred             cCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHHHH
Confidence            99999998753311  0        000 01111  1         12345667889999988753  578899999999


Q ss_pred             HHHHHHhCCCCceEEEE
Q 020320          290 AFRYLETGRARGKVVIS  306 (327)
Q Consensus       290 a~~~~~~~~~~gk~vv~  306 (327)
                      +++.+.++...+|++++
T Consensus       308 ~~~~~~~~~~~~~~v~~  324 (325)
T TIGR02824       308 AHALMESGDHIGKIVLT  324 (325)
T ss_pred             HHHHHHhCCCcceEEEe
Confidence            99999988888888875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=6e-31  Score=237.92  Aligned_cols=292  Identities=25%  Similarity=0.354  Sum_probs=223.6

Q ss_pred             ccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEE
Q 020320            9 EYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV   85 (327)
Q Consensus         9 ~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V   85 (327)
                      +++.  .+++++.|.|.++++||+||+.++++|++|+..+.+..   ....+|.++|+|++|+|+++|++++++++||+|
T Consensus         6 ~~~~--~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V   83 (340)
T TIGR00692         6 KPGY--GAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV   83 (340)
T ss_pred             cCCC--CcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence            4444  49999999999999999999999999999998765432   122356789999999999999999999999999


Q ss_pred             EEecc------------cccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCC
Q 020320           86 YGNIQ------------DFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKT  148 (327)
Q Consensus        86 ~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~  148 (327)
                      ++...            ....|..     ....|+|++|++++.+.++++|++++.+.+ .++..+.++++++ .....+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~-~~~~~~  161 (340)
T TIGR00692        84 SVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV-LAGPIS  161 (340)
T ss_pred             EECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH-HccCCC
Confidence            87421            1111111     124689999999999999999999998655 4667778888886 445678


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIG  221 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g  221 (327)
                      |++++|.| +|.+|.+++++++++ |.+ ++++.+++++.+.++++|++.+++.....+.+.+      +++|+++|++|
T Consensus       162 g~~vlI~~-~g~vg~~a~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g  239 (340)
T TIGR00692       162 GKSVLVTG-AGPIGLMAIAVAKAS-GAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSG  239 (340)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCC
Confidence            99999976 799999999999999 887 6666577778888899999888877665554322      46999999987


Q ss_pred             C---chhhhhhhcCCCcEEEeeCCCC-CCce---------eeEE--e-ecCHHHHHHHHhHHHCCCceeeeCCCcccchh
Q 020320          222 D---CKNSFVVAKDNAPIVDITWPPS-HPRA---------IYSS--L-TVSGEILEKLRPFIESGKLKAQIDPTGPYKFK  285 (327)
Q Consensus       222 ~---~~~~~~~l~~~g~~v~~g~~~~-~~~~---------~~~~--~-~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~  285 (327)
                      .   ....+.+++++|+++.+|.... .+..         +...  . ....+.+++++++++++++++.+.+.+.++++
T Consensus       240 ~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~  319 (340)
T TIGR00692       240 APKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFD  319 (340)
T ss_pred             CHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHH
Confidence            4   3667899999999999985421 1100         0000  0 11235578899999999997433357899999


Q ss_pred             hHHHHHHHHHhCCCCceEEEEe
Q 020320          286 DVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       286 ~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +++++++.+.++. .+|+++.+
T Consensus       320 ~~~~a~~~~~~~~-~gkvvv~~  340 (340)
T TIGR00692       320 KFEKGFELMRSGQ-TGKVILSL  340 (340)
T ss_pred             HHHHHHHHHhcCC-CceEEEeC
Confidence            9999999998776 48998764

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=9.4e-31  Score=235.52  Aligned_cols=287  Identities=24%  Similarity=0.318  Sum_probs=226.9

Q ss_pred             CceeEEecccC----CCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeC
Q 020320            1 MQNAWYYEEYG----PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKG   73 (327)
Q Consensus         1 ~~~~~v~~~~~----~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG   73 (327)
                      +-|+|+++..+    .++.+++++.|.|++.+++|+||+.++++|++|.....+..   ++...+.++|+|++|+|+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G   80 (329)
T cd05288           1 SNRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESR   80 (329)
T ss_pred             CCcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecC
Confidence            35788887765    34679999999999999999999999999998876554421   111124578999999999999


Q ss_pred             CCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeec-cceecCCCCCC--HHhhcc-cchHHHHHHHHHH-hcCCCC
Q 020320           74 TSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEE-SLIAKKPKNIS--FEEAAS-LPLAVQTAIEGFK-TAGFKT  148 (327)
Q Consensus        74 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~~p~~~~--~~~aa~-~~~~~~ta~~~l~-~~~~~~  148 (327)
                      ++  ++++||+|+++             ++|++|+.++. +.++++|++++  +..++. +++++.++|+++. ...+.+
T Consensus        81 ~~--~~~~Gd~V~~~-------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~  145 (329)
T cd05288          81 SP--DFKVGDLVSGF-------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKP  145 (329)
T ss_pred             CC--CCCCCCEEecc-------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCC
Confidence            65  79999999975             47999999999 99999999985  445544 7888999999985 477899


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhhhc-----cCccEEEeCCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD  222 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~  222 (327)
                      +++|+|+|++|.+|++++++++.+ |++++++++++++.+.+++ +|++++++.++.++....     +++|+++|++|.
T Consensus       146 ~~~vlI~g~~g~ig~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~  224 (329)
T cd05288         146 GETVVVSAAAGAVGSVVGQIAKLL-GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGG  224 (329)
T ss_pred             CCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchH
Confidence            999999999999999999999998 9999888889999999988 999988887765443321     479999999985


Q ss_pred             c--hhhhhhhcCCCcEEEeeCCCCCCc---------------eee-EEeec-C-----HHHHHHHHhHHHCCCceeeeCC
Q 020320          223 C--KNSFVVAKDNAPIVDITWPPSHPR---------------AIY-SSLTV-S-----GEILEKLRPFIESGKLKAQIDP  278 (327)
Q Consensus       223 ~--~~~~~~l~~~g~~v~~g~~~~~~~---------------~~~-~~~~~-~-----~~~~~~~~~l~~~g~~~~~~~~  278 (327)
                      .  ..++.+++++|+++.+|.......               ... ..... .     .+.+.++++++.++.+++.  +
T Consensus       225 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~  302 (329)
T cd05288         225 EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYR--E  302 (329)
T ss_pred             HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccc--c
Confidence            3  678899999999999875332110               000 01111 1     2457888999999999864  3


Q ss_pred             CcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          279 TGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       279 ~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      ...+++++++++++.+.++...+|+++
T Consensus       303 ~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         303 DVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             cccccHHHHHHHHHHHhcCCCccceeC
Confidence            466899999999999988887778763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.4e-30  Score=231.15  Aligned_cols=297  Identities=29%  Similarity=0.457  Sum_probs=238.6

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++...+.++.+.+.+.+.|.+.+++++|++.++++|++|+....+.+. ...+|.++|||++|+|+.+|+++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            7899998877766788988888889999999999999999999987766542 234577899999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g  159 (327)
                      +||+|+++...     .....|++++|+.++.+.++++|++++...++.++..+.++|+++. ...+.++++++|+|++|
T Consensus        81 ~Gd~V~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~  155 (328)
T cd08268          81 VGDRVSVIPAA-----DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASS  155 (328)
T ss_pred             CCCEEEecccc-----ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCcc
Confidence            99999987421     1123589999999999999999999999999999999999999985 57888999999999899


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      .+|++++++++.. |++++.++.++++.+.+.++|.+.+++.+...+....      +++|++++++|..  ..++.+++
T Consensus       156 ~~g~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~  234 (328)
T cd08268         156 SVGLAAIQIANAA-GATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALA  234 (328)
T ss_pred             HHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhc
Confidence            9999999999999 9999999888888888888998888876655443321      3699999998853  66789999


Q ss_pred             CCCcEEEeeCCCCCC----c------e-eeEEeec-----C----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHH
Q 020320          232 DNAPIVDITWPPSHP----R------A-IYSSLTV-----S----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAF  291 (327)
Q Consensus       232 ~~g~~v~~g~~~~~~----~------~-~~~~~~~-----~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~  291 (327)
                      ++|+++.+|......    .      . .+.....     .    ...++.+.+++.++.+.+.  .+..|+++++++++
T Consensus       235 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  312 (328)
T cd08268         235 PGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAH  312 (328)
T ss_pred             cCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHH
Confidence            999999887432110    0      0 1111111     1    2335556667778887753  46889999999999


Q ss_pred             HHHHhCCCCceEEEE
Q 020320          292 RYLETGRARGKVVIS  306 (327)
Q Consensus       292 ~~~~~~~~~gk~vv~  306 (327)
                      +.+.++...+|++++
T Consensus       313 ~~~~~~~~~~~vv~~  327 (328)
T cd08268         313 RYLESGQQIGKIVVT  327 (328)
T ss_pred             HHHHcCCCCceEEEe
Confidence            999888888898875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=1.3e-30  Score=231.36  Aligned_cols=272  Identities=29%  Similarity=0.502  Sum_probs=225.3

Q ss_pred             CCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCC
Q 020320           23 LPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL  101 (327)
Q Consensus        23 ~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~  101 (327)
                      .|.+.+++|+||+.++++|++|+....+.++ ...+|.++|+|++|+|+++|++++++++||+|+++..        ...
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------~~~   73 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG--------ESM   73 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC--------CCC
Confidence            4678899999999999999999998877653 2356889999999999999999999999999998742        135


Q ss_pred             CceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe
Q 020320          102 GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT  181 (327)
Q Consensus       102 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~  181 (327)
                      |+|++|+.++.+.++++|+++++++++.++..+.++|++++...+++|++++|++++|.+|++++++++++ |++++.++
T Consensus        74 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~-g~~v~~~~  152 (303)
T cd08251          74 GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLK-GAEIYATA  152 (303)
T ss_pred             cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEc
Confidence            89999999999999999999999999999999999999998889999999999999999999999999999 99998888


Q ss_pred             CCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCCCC-------
Q 020320          182 TSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPSHP-------  246 (327)
Q Consensus       182 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~~-------  246 (327)
                      .++++.+.++++|++.+++....++...+      +++|+++|+++..  ...+.+++++|+++.++......       
T Consensus       153 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~  232 (303)
T cd08251         153 SSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS  232 (303)
T ss_pred             CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh
Confidence            88889999999999998887665544322      4699999999743  66789999999999886532110       


Q ss_pred             ----ceeeEEeec----------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          247 ----RAIYSSLTV----------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       247 ----~~~~~~~~~----------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                          ...+....+          ..+.+.++++++.++.+++.  .++.|++++++++++.+.++...+|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         233 VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence                001111111          12457778899999998753  4788999999999999998888888763

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=1.7e-29  Score=227.69  Aligned_cols=292  Identities=32%  Similarity=0.449  Sum_probs=231.9

Q ss_pred             eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      |++++..++..+.+.+.+.+.|.+.+++|+||+.++++|++|+....+.++ ....|.++|||++|+|+.+|++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   80 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV   80 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence            567777777666688888888889999999999999999999998877543 2345778999999999999999999999


Q ss_pred             CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCch
Q 020320           82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGG  160 (327)
Q Consensus        82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~  160 (327)
                      ||+|+++.          ..|+|++|+.++.+.++++|+++++.+++.++..+.++|+++. ...++++++|+|+|++|.
T Consensus        81 G~~V~~~~----------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~  150 (337)
T cd08275          81 GDRVMGLT----------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGG  150 (337)
T ss_pred             CCEEEEec----------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcch
Confidence            99999975          2589999999999999999999999999988999999999984 688999999999998899


Q ss_pred             HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--hhhhhhhcCC
Q 020320          161 VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--KNSFVVAKDN  233 (327)
Q Consensus       161 ~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--~~~~~~l~~~  233 (327)
                      +|++++++++.+ ....++....+++.+.++++|++.+++.+..++...+     +++|+++|++|+.  ...+.+++++
T Consensus       151 ~g~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~  229 (337)
T cd08275         151 VGLAAGQLCKTV-PNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPM  229 (337)
T ss_pred             HHHHHHHHHHHc-cCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccC
Confidence            999999999987 3322222234457788888999888877665543322     4699999999843  6678999999


Q ss_pred             CcEEEeeCCCCCC--------------------------ce-eeEEeec---------CHHHHHHHHhHHHCCCceeeeC
Q 020320          234 APIVDITWPPSHP--------------------------RA-IYSSLTV---------SGEILEKLRPFIESGKLKAQID  277 (327)
Q Consensus       234 g~~v~~g~~~~~~--------------------------~~-~~~~~~~---------~~~~~~~~~~l~~~g~~~~~~~  277 (327)
                      |+++.+|......                          .. .+.....         ....+.++++++.++.+.+.  
T Consensus       230 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  307 (337)
T cd08275         230 GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--  307 (337)
T ss_pred             cEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--
Confidence            9999987543110                          00 0001111         01346788889999988754  


Q ss_pred             CCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          278 PTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       278 ~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      .++.|++++++++++.+.++...+|+++.+
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         308 IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            468899999999999999888888998764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.98  E-value=9.8e-30  Score=226.60  Aligned_cols=237  Identities=26%  Similarity=0.422  Sum_probs=193.3

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||+++.++++ ...+.+++++.|.+.+++|+||+.++++|++|+....+.+.....|.++|+|++|+|+.+|++++.+++
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   79 (306)
T cd08258           1 MKALVKTGPG-PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKV   79 (306)
T ss_pred             CeeEEEecCC-CCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCC
Confidence            7899987644 245999999999999999999999999999999888776533345788999999999999999999999


Q ss_pred             CCEEEEecc--c-----------ccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-
Q 020320           82 GDEVYGNIQ--D-----------FNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-  142 (327)
Q Consensus        82 Gd~V~~~~~--~-----------~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-  142 (327)
                      ||+|++...  .           .+.|.     +....|+|++|++++.+.++++|+++++++++ ++..+.++|+++. 
T Consensus        80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~  158 (306)
T cd08258          80 GDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAE  158 (306)
T ss_pred             CCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHH
Confidence            999998642  0           01111     01235899999999999999999999999887 6677788999984 


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe--CCcccHHHHHHcCCCEEEeCCCCChhhhc------cCcc
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT--TSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFD  214 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d  214 (327)
                      ..+++++++|+|.| +|.+|++++++|+.+ |.+++.+.  .++++.++++++|++++ +....++.+.+      +++|
T Consensus       159 ~~~~~~g~~vlI~g-~g~~g~~~~~la~~~-G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~vd  235 (306)
T cd08258         159 RSGIRPGDTVVVFG-PGPIGLLAAQVAKLQ-GATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGAD  235 (306)
T ss_pred             hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCCCCC
Confidence            58889999999976 899999999999999 88877663  24447788889999887 76665554432      4699


Q ss_pred             EEEeCCCC---chhhhhhhcCCCcEEEeeCCC
Q 020320          215 VLYDTIGD---CKNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       215 ~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~  243 (327)
                      +++|++|.   ....+.+++++|+++.+|...
T Consensus       236 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  267 (306)
T cd08258         236 VVIECSGAVPALEQALELLRKGGRIVQVGIFG  267 (306)
T ss_pred             EEEECCCChHHHHHHHHHhhcCCEEEEEcccC
Confidence            99999974   267789999999999998754

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=3.4e-29  Score=224.05  Aligned_cols=291  Identities=32%  Similarity=0.489  Sum_probs=236.2

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCC-CCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQ-HDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~-~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |+++++..++....+.+.+.+ |.+. +++++|++.++++|++|+....+.+. ...+|.++|||++|+|+.+|+++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            789999877766668888877 7665 59999999999999999988766542 22346789999999999999999999


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCC
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGA  158 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~  158 (327)
                      ++||+|+++.          ..|++++|+.++.+.++++|++++..+++.++..+.+|++++. ...+.++++++|+|++
T Consensus        80 ~~G~~V~~~~----------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~  149 (323)
T cd08241          80 KVGDRVVALT----------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAA  149 (323)
T ss_pred             CCCCEEEEec----------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            9999999974          2589999999999999999999999998888889999999985 6888999999999988


Q ss_pred             chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCC--chhhhhhh
Q 020320          159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGD--CKNSFVVA  230 (327)
Q Consensus       159 g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~--~~~~~~~l  230 (327)
                      |.+|++++++++.. |++++.++.++++.+.++++|++.+++....++...+      .++|.+++++|.  ...++.++
T Consensus       150 ~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~  228 (323)
T cd08241         150 GGVGLAAVQLAKAL-GARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSL  228 (323)
T ss_pred             chHHHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhh
Confidence            99999999999998 9999998888888999988998888876665544322      369999999984  36778999


Q ss_pred             cCCCcEEEeeCCCCCC----c------ee-eEEeec----------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHH
Q 020320          231 KDNAPIVDITWPPSHP----R------AI-YSSLTV----------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIE  289 (327)
Q Consensus       231 ~~~g~~v~~g~~~~~~----~------~~-~~~~~~----------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~  289 (327)
                      +++|+++.++......    .      .. +.....          ..+.++++++++.++.+.+.  .++.|+++++++
T Consensus       229 ~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  306 (323)
T cd08241         229 AWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPH--VSAVFPLEQAAE  306 (323)
T ss_pred             ccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccc--cceEEcHHHHHH
Confidence            9999999887532110    0      00 011110          13567889999999988653  578899999999


Q ss_pred             HHHHHHhCCCCceEEEE
Q 020320          290 AFRYLETGRARGKVVIS  306 (327)
Q Consensus       290 a~~~~~~~~~~gk~vv~  306 (327)
                      +|+.+.++...+|++++
T Consensus       307 ~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         307 ALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHHHHhCCCCCcEEeC
Confidence            99999888777888763

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.97  E-value=7.4e-30  Score=224.49  Aligned_cols=226  Identities=21%  Similarity=0.218  Sum_probs=175.7

Q ss_pred             cccccccEEEEEeCCCCC------CCCCCCEEEEec----c--------cccccCcC------------CCCCceeeEEE
Q 020320           60 VPGCDMAGIVVAKGTSVT------KFNTGDEVYGNI----Q--------DFNAEGKL------------KQLGALAEFIV  109 (327)
Q Consensus        60 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~----~--------~~~~~~~~------------~~~g~~~~~~~  109 (327)
                      ++|||++|+|+++|++|+      ++++||||....    +        ..+.|...            ..+|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            479999999999999999      899999997532    1        12333211            13699999999


Q ss_pred             eecc-ceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccH
Q 020320          110 VEES-LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKV  187 (327)
Q Consensus       110 v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~  187 (327)
                      +++. +++++|++++++.++.+++++.|+|++++.....++++|+|+| +|++|++++++||++ |++ ++++..+++|+
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~-G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVG-AGMLGLTAAAAAAAA-GAARVVAADPSPDRR  158 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHH
Confidence            9987 7999999999999998888889999999877777999999998 699999999999999 887 66666788899


Q ss_pred             HHHHHcCCCEEEeCCCCCh--hhh--ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCC-CCc------------
Q 020320          188 EFVKELGADKVIDYRKTKY--EDI--EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPS-HPR------------  247 (327)
Q Consensus       188 ~~~~~~g~~~v~~~~~~~~--~~~--~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~-~~~------------  247 (327)
                      ++++++|++.+++......  ...  .+++|++||++|..   ..++.+++++|+++.+|.... .+.            
T Consensus       159 ~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~  238 (280)
T TIGR03366       159 ELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWL  238 (280)
T ss_pred             HHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCc
Confidence            9999999999887543211  111  14799999999843   678999999999999985421 111            


Q ss_pred             eeeEEeecCHHHHHHHHhHHHCC--CceeeeCCCcccchhhH
Q 020320          248 AIYSSLTVSGEILEKLRPFIESG--KLKAQIDPTGPYKFKDV  287 (327)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~i  287 (327)
                      .+..+.....++++++++++.++  ++++.+++++.|+++|+
T Consensus       239 ~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       239 TIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             EEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            11122223457789999999984  56655677899998763

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=2.4e-28  Score=215.18  Aligned_cols=261  Identities=33%  Similarity=0.472  Sum_probs=214.5

Q ss_pred             CeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEE
Q 020320           29 DQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFI  108 (327)
Q Consensus        29 ~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~  108 (327)
                      ++|+||+.++++|++|++...+..  ..+|.++|||++|+|+++|++++++++||+|+++.           .|+|++|+
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-----------~g~~~~~~   67 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-----------PGAFATHV   67 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-----------cCcccceE
Confidence            589999999999999999887754  24578899999999999999999999999999874           48999999


Q ss_pred             EeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320          109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV  187 (327)
Q Consensus       109 ~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~  187 (327)
                      .++.+.++++|+++++.+++.++.++.++|+++. ...+++|++++|+|++|.+|++++++++.+ |++++.++.++++.
T Consensus        68 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~  146 (293)
T cd05195          68 RVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATVGSEEKR  146 (293)
T ss_pred             EechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHH
Confidence            9999999999999999999999999999999984 588999999999998999999999999999 99998888888889


Q ss_pred             HHHHHcC--CCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCCCC---c-------
Q 020320          188 EFVKELG--ADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPSHP---R-------  247 (327)
Q Consensus       188 ~~~~~~g--~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~~---~-------  247 (327)
                      +.+++++  ++.+++....++....      +++|++++++|..  ...+.+++++|+++.++......   .       
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~  226 (293)
T cd05195         147 EFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFLR  226 (293)
T ss_pred             HHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhhhcc
Confidence            8888888  6778876554443321      3699999999854  77889999999999887543210   0       


Q ss_pred             -eeeEEeec----------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          248 -AIYSSLTV----------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       248 -~~~~~~~~----------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                       ..+....+          ..+.+..++++++++++.+.  .++.+++++++++++.+.++...+|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         227 NVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPL--PPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             CCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccC--CCeeechhhHHHHHHHHhcCCCCceecC
Confidence             01111111          12456788899999998753  4678999999999999998887777763

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.96  E-value=1.6e-27  Score=209.65  Aligned_cols=256  Identities=32%  Similarity=0.490  Sum_probs=209.6

Q ss_pred             EEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeec
Q 020320           33 VQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEE  112 (327)
Q Consensus        33 V~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~  112 (327)
                      ||+.++++|++|++...+.++   .|.++|||++|+|+.+|++++.+++||+|+++.           .|+|++|+.++.
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------~g~~~~~~~~~~   67 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------PGSFATYVRTDA   67 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------CCceeeEEEccH
Confidence            899999999999998877543   367899999999999999999999999999874           489999999999


Q ss_pred             cceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH
Q 020320          113 SLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK  191 (327)
Q Consensus       113 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~  191 (327)
                      ++++++|+++++.+++.+++.+.++|+++ ....+.++++++|+|++|.+|++++++++++ |++++.+++++++.+.++
T Consensus        68 ~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~  146 (288)
T smart00829       68 RLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATAGSPEKRDFLR  146 (288)
T ss_pred             HHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence            99999999999999999999999999998 5688999999999999999999999999998 999888888999999999


Q ss_pred             HcCC--CEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCCC---Cc--------eee
Q 020320          192 ELGA--DKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPSH---PR--------AIY  250 (327)
Q Consensus       192 ~~g~--~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~---~~--------~~~  250 (327)
                      ++|+  +++++.+..++.+..      +++|+++|++|+.  ...+.+++++|+++.+|.....   ..        ..+
T Consensus       147 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~  226 (288)
T smart00829      147 ELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAPFRRNVSY  226 (288)
T ss_pred             HcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhhhcCCceE
Confidence            9998  778876655543322      3699999998743  6678999999999988753210   00        011


Q ss_pred             EEeec---------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          251 SSLTV---------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       251 ~~~~~---------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                      ....+         ..+.+..++++++++++.+.  ..+.|++++++++++.+..+...+|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      227 HAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             EEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            11111         12346778889999988753  4678999999999999988877677663

Enoylreductase in Polyketide synthases.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=2.1e-26  Score=201.11  Aligned_cols=212  Identities=33%  Similarity=0.453  Sum_probs=178.3

Q ss_pred             eEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecccc-------------ccc
Q 020320           30 QLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDF-------------NAE   95 (327)
Q Consensus        30 eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~-------------~~~   95 (327)
                      ||+|++.++++|++|+..+.+..+ ...+|.++|||++|+|+++|++++.+++||+|++.....             ...
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~   80 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI   80 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence            689999999999999998877654 345678899999999999999999999999999875210             000


Q ss_pred             CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHhhcC
Q 020320           96 GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG  174 (327)
Q Consensus        96 ~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g  174 (327)
                      .+....|+|++|+.++.+.++++|+++++++++.++..+.+||+++.. ..+.++++++|+|+++ +|++++++++.+ |
T Consensus        81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~-g  158 (271)
T cd05188          81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAA-G  158 (271)
T ss_pred             eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHc-C
Confidence            122346899999999999999999999999999999999999999965 4458999999999666 999999999998 8


Q ss_pred             CcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh-----ccCccEEEeCCCC-c--hhhhhhhcCCCcEEEeeCCC
Q 020320          175 ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI-----EEKFDVLYDTIGD-C--KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       175 ~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-----~~~~d~v~d~~g~-~--~~~~~~l~~~g~~v~~g~~~  243 (327)
                      .++++++.++++.+.++++|++++++.........     ..++|+++++++. .  ...+.+++++|+++.++...
T Consensus       159 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~  235 (271)
T cd05188         159 ARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS  235 (271)
T ss_pred             CeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence            99998889988999999999988887766555443     2579999999986 2  67789999999999998654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.94  E-value=2.8e-25  Score=195.15  Aligned_cols=229  Identities=32%  Similarity=0.418  Sum_probs=183.6

Q ss_pred             CCCCcccccccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHH
Q 020320           56 DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQ  135 (327)
Q Consensus        56 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  135 (327)
                      .+|.++|||++|+|+++|++++++++||+|+++             +.|++|++++.++++++|+++++.+++.+ .++.
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~   84 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAA   84 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHH
Confidence            388999999999999999999999999999986             35899999999999999999999998888 7889


Q ss_pred             HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcC-CCEEEeCCCCChhhhccCc
Q 020320          136 TAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELG-ADKVIDYRKTKYEDIEEKF  213 (327)
Q Consensus       136 ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~  213 (327)
                      +||+++...+++++++++|+| +|.+|++++++|+++ |.+ ++++++++++.+.++++| ++.++......  ...+++
T Consensus        85 ta~~~~~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~-g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~  160 (277)
T cd08255          85 TALNGVRDAEPRLGERVAVVG-LGLVGLLAAQLAKAA-GAREVVGVDPDAARRELAEALGPADPVAADTADE--IGGRGA  160 (277)
T ss_pred             HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEECCCHHHHHHHHHcCCCccccccchhh--hcCCCC
Confidence            999999888999999999997 799999999999999 888 888888889999999999 56665433211  122479


Q ss_pred             cEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC----------c-eeeEE-ee-----------cCHHHHHHHHhHH
Q 020320          214 DVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP----------R-AIYSS-LT-----------VSGEILEKLRPFI  267 (327)
Q Consensus       214 d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~----------~-~~~~~-~~-----------~~~~~~~~~~~l~  267 (327)
                      |++||+++.   ....+.+++++|+++.+|......          . .+... ..           ...+.++++++++
T Consensus       161 d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  240 (277)
T cd08255         161 DVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL  240 (277)
T ss_pred             CEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence            999999874   267889999999999987543210          0 11111 00           0125688999999


Q ss_pred             HCCCceeeeCCCcccchhhHHHHHHHHHhC-CCCceEE
Q 020320          268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETG-RARGKVV  304 (327)
Q Consensus       268 ~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~-~~~gk~v  304 (327)
                      +++.+.+.  +.+.|++++++++|+.+.++ ....|++
T Consensus       241 ~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~k~~  276 (277)
T cd08255         241 AEGRLEAL--ITHRVPFEDAPEAYRLLFEDPPECLKVV  276 (277)
T ss_pred             HcCCcccc--ccCccCHHHHHHHHHHHHcCCccceeee
Confidence            99998753  47889999999999999766 3334554

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.94  E-value=7.1e-24  Score=177.59  Aligned_cols=289  Identities=22%  Similarity=0.306  Sum_probs=215.6

Q ss_pred             eeEEeccc--CCC--cceEEee--cc-CCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccc----cccEEEE
Q 020320            3 NAWYYEEY--GPK--EVLKLGD--FP-LPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGC----DMAGIVV   70 (327)
Q Consensus         3 ~~~v~~~~--~~~--~~l~~~~--~~-~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~----e~~G~V~   70 (327)
                      |+|++..+  |-+  ..+.+.+  +. ..+++.++||||.+|.+.+|..+-.+....+. .-.|..+|.    .++|+|+
T Consensus         5 kqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi   84 (343)
T KOG1196|consen    5 KQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVI   84 (343)
T ss_pred             cEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEE
Confidence            55666542  222  2344443  33 44679999999999999999988776554332 223444443    5688888


Q ss_pred             EeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeecc--ceecCCC--CCCHHhhc-ccchHHHHHHHHH-Hhc
Q 020320           71 AKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEES--LIAKKPK--NISFEEAA-SLPLAVQTAIEGF-KTA  144 (327)
Q Consensus        71 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~--~~~~~~aa-~~~~~~~ta~~~l-~~~  144 (327)
                      +.  +-+++++||.|.++.             +|.+|.+++..  ..++++.  +.++--.. .+.++.+|||-++ +..
T Consensus        85 ~S--~~~~~~~GD~v~g~~-------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~  149 (343)
T KOG1196|consen   85 DS--GHPNYKKGDLVWGIV-------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEIC  149 (343)
T ss_pred             ec--CCCCCCcCceEEEec-------------cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhc
Confidence            85  557899999999875             69999988653  4444443  44443333 3477788999998 468


Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCC-Chhhhc-----cCccEEE
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKT-KYEDIE-----EKFDVLY  217 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~-----~~~d~v~  217 (327)
                      .++.|++|+|.||+|++|+.+.|+||.+ |+++|..+.++++..+++ ++|.|..+|++++ +....+     .++|+.|
T Consensus       150 ~pk~geTv~VSaAsGAvGql~GQ~Ak~~-Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYf  228 (343)
T KOG1196|consen  150 SPKKGETVFVSAASGAVGQLVGQFAKLM-GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYF  228 (343)
T ss_pred             CCCCCCEEEEeeccchhHHHHHHHHHhc-CCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEE
Confidence            8999999999999999999999999999 999999999999999986 5799999999887 554443     5899999


Q ss_pred             eCCCCc--hhhhhhhcCCCcEEEeeCCC----CCCc-------eeeEEeec-----------CHHHHHHHHhHHHCCCce
Q 020320          218 DTIGDC--KNSFVVAKDNAPIVDITWPP----SHPR-------AIYSSLTV-----------SGEILEKLRPFIESGKLK  273 (327)
Q Consensus       218 d~~g~~--~~~~~~l~~~g~~v~~g~~~----~~~~-------~~~~~~~~-----------~~~~~~~~~~l~~~g~~~  273 (327)
                      |.+|+.  +..+..|+..|+++..|.-.    ..+.       .+.....+           ..+.+..+..++++|+|.
T Consensus       229 eNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~  308 (343)
T KOG1196|consen  229 ENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKIT  308 (343)
T ss_pred             eccCcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceE
Confidence            999864  77889999999999987422    1111       11121111           246678899999999999


Q ss_pred             eeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320          274 AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFP  309 (327)
Q Consensus       274 ~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~  309 (327)
                      ....  -.-++++.++||.-|..+++.||.++++..
T Consensus       309 y~ed--i~~Glen~P~A~vglf~GkNvGKqiv~va~  342 (343)
T KOG1196|consen  309 YVED--IADGLENGPSALVGLFHGKNVGKQLVKVAR  342 (343)
T ss_pred             Eehh--HHHHHhccHHHHHHHhccCcccceEEEeec
Confidence            8652  334799999999999999999999998753

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.94  E-value=8.5e-26  Score=215.62  Aligned_cols=279  Identities=23%  Similarity=0.352  Sum_probs=229.6

Q ss_pred             CCCcceEEeeccCC---CCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCC-------CcccccccEEEEEeCCCCCCCC
Q 020320           11 GPKEVLKLGDFPLP---TPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFP-------AVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus        11 ~~~~~l~~~~~~~p---~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p-------~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |+..+++|.+.|..   +..++.=+.-|-|++||..|+....|..++...|       +++|-|++|+          .+
T Consensus      1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DA 1493 (2376)
T ss_pred             ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cC
Confidence            55567888888765   4577778889999999999999998988554444       7889999887          67


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g  159 (327)
                      -|.||+++.+          .-++++.+.++.+++|.+|++..+++|++.|+.|.|+|+++ .++..++|+++||++++|
T Consensus      1494 ~GrRvM~mvp----------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsG 1563 (2376)
T KOG1202|consen 1494 SGRRVMGMVP----------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSG 1563 (2376)
T ss_pred             CCcEEEEeee----------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCC
Confidence            8999999874          45788899999999999999999999999999999999998 589999999999999999


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhhc------cCccEEEeCCC--Cchhhh
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDIE------EKFDVLYDTIG--DCKNSF  227 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g--~~~~~~  227 (327)
                      ++|++|+.+|.++ |++++.++.+.++++++.+    +...++-|+++.+|.+-.      +|+|+|+++..  .+...+
T Consensus      1564 GVGQAAIaiALa~-G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASi 1642 (2376)
T KOG1202|consen 1564 GVGQAAIAIALAH-GCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASI 1642 (2376)
T ss_pred             chhHHHHHHHHHc-CCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHH
Confidence            9999999999999 9999999999999998864    446677788888888754      68999999986  458889


Q ss_pred             hhhcCCCcEEEeeCCCCCCce---e--------eEEe------ecCHHHHHHHHhHHHCC----CceeeeCCCcccchhh
Q 020320          228 VVAKDNAPIVDITWPPSHPRA---I--------YSSL------TVSGEILEKLRPFIESG----KLKAQIDPTGPYKFKD  286 (327)
Q Consensus       228 ~~l~~~g~~v~~g~~~~~~~~---~--------~~~~------~~~~~~~~~~~~l~~~g----~~~~~~~~~~~~~~~~  286 (327)
                      +||+..||+..+|........   +        +...      .-..+.++++.+++++|    ..+|  +++++|+-.+
T Consensus      1643 RCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~P--L~ttvF~~~q 1720 (2376)
T KOG1202|consen 1643 RCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRP--LPTTVFHGQQ 1720 (2376)
T ss_pred             HHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceec--cccccccHHH
Confidence            999999999999864422111   1        1111      11235677777777665    4554  5689999999


Q ss_pred             HHHHHHHHHhCCCCceEEEEeCCCCC
Q 020320          287 VIEAFRYLETGRARGKVVISAFPYTE  312 (327)
Q Consensus       287 i~~a~~~~~~~~~~gk~vv~~~~~~~  312 (327)
                      +++||++|.+++..||+|+++.+...
T Consensus      1721 vE~AFRfMasGKHIGKVvikvr~eE~ 1746 (2376)
T KOG1202|consen 1721 VEDAFRFMASGKHIGKVVIKVRAEEP 1746 (2376)
T ss_pred             HHHHHHHHhccCccceEEEEEccccc
Confidence            99999999999999999999976653

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.75  E-value=8.6e-18  Score=126.21  Aligned_cols=91  Identities=34%  Similarity=0.440  Sum_probs=74.2

Q ss_pred             CCeEEEEEEEEeeChHhHhhhcC-CCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecc------------cccc
Q 020320           28 HDQLLVQVRAAALNPIDSKRRQR-PLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQ------------DFNA   94 (327)
Q Consensus        28 ~~eVlV~v~~~~i~~~d~~~~~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~------------~~~~   94 (327)
                      |+|||||+.+++||++|++.+.+ ......+|.++|||++|+|+++|+++++|++||+|+....            ..+.
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            68999999999999999999998 3456788999999999999999999999999999987432            1222


Q ss_pred             c-----CcCCCCCceeeEEEeeccceecC
Q 020320           95 E-----GKLKQLGALAEFIVVEESLIAKK  118 (327)
Q Consensus        95 ~-----~~~~~~g~~~~~~~v~~~~~~~~  118 (327)
                      |     .+...+|+|+||+.+++++++++
T Consensus        81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence            3     23457899999999999999874

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.33  E-value=1.1e-11  Score=95.90  Aligned_cols=83  Identities=35%  Similarity=0.527  Sum_probs=74.5

Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc---hhhhhhh
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC---KNSFVVA  230 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~---~~~~~~l  230 (327)
                      ++|++++|+||++ |+++++++++++|+++++++|+++++++++.++.+.+      +++|++|||+|..   +.++.++
T Consensus         1 ~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l   79 (130)
T PF00107_consen    1 GVGLMAIQLAKAM-GAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL   79 (130)
T ss_dssp             HHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred             ChHHHHHHHHHHc-CCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence            5899999999999 7999999999999999999999999999888776654      3699999999943   7889999


Q ss_pred             cCCCcEEEeeCCC
Q 020320          231 KDNAPIVDITWPP  243 (327)
Q Consensus       231 ~~~g~~v~~g~~~  243 (327)
                      +++|+++.+|...
T Consensus        80 ~~~G~~v~vg~~~   92 (130)
T PF00107_consen   80 RPGGRIVVVGVYG   92 (130)
T ss_dssp             EEEEEEEEESSTS
T ss_pred             ccCCEEEEEEccC
Confidence            9999999999876

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.22  E-value=1.5e-10  Score=105.46  Aligned_cols=168  Identities=18%  Similarity=0.183  Sum_probs=123.7

Q ss_pred             HHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320          137 AIEGFKT--AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       137 a~~~l~~--~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d  214 (327)
                      .|.++.+  ....+|++|+|.| +|.+|+.+++.++.+ |++++++..++.|...++++|++.+.      ..+...++|
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~-Ga~ViV~d~d~~R~~~A~~~G~~~~~------~~e~v~~aD  259 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQ-GARVIVTEVDPICALQAAMEGYEVMT------MEEAVKEGD  259 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEECChhhHHHHHhcCCEEcc------HHHHHcCCC
Confidence            4555532  3347899999999 999999999999998 89988888899999999999985431      224456899


Q ss_pred             EEEeCCCCc---hh-hhhhhcCCCcEEEeeCCCC-CCc--------eeeEEeecCHH-HHH--HHHhHHHCCCc-eeeeC
Q 020320          215 VLYDTIGDC---KN-SFVVAKDNAPIVDITWPPS-HPR--------AIYSSLTVSGE-ILE--KLRPFIESGKL-KAQID  277 (327)
Q Consensus       215 ~v~d~~g~~---~~-~~~~l~~~g~~v~~g~~~~-~~~--------~~~~~~~~~~~-~~~--~~~~l~~~g~~-~~~~~  277 (327)
                      ++|+++|..   .. .+..++++|.++.+|.... .+.        ..........+ .++  +.+.++++|++ +....
T Consensus       260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~  339 (413)
T cd00401         260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFDVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCA  339 (413)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCCCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCccc
Confidence            999999854   33 4889999999999986431 110        11111122112 455  69999999999 76667


Q ss_pred             CCcc-----cchh-hHHHHHHHHHhCCC-CceEEEEeCCCCC
Q 020320          278 PTGP-----YKFK-DVIEAFRYLETGRA-RGKVVISAFPYTE  312 (327)
Q Consensus       278 ~~~~-----~~~~-~i~~a~~~~~~~~~-~gk~vv~~~~~~~  312 (327)
                      .+|.     ++|+ |+.++++.+.+... ..|+++.+.+.++
T Consensus       340 ~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~~d~  381 (413)
T cd00401         340 TGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKKLDE  381 (413)
T ss_pred             CCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHHHHH
Confidence            7888     9999 99999999987654 3688887765553

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.15  E-value=3e-11  Score=93.16  Aligned_cols=109  Identities=39%  Similarity=0.543  Sum_probs=74.9

Q ss_pred             cCCCEEEeCCCCChhhhccCccEEEeCCC--Cc---hhhhhhhcCCCcEEEeeCC-C-C----CCceeeEEeec------
Q 020320          193 LGADKVIDYRKTKYEDIEEKFDVLYDTIG--DC---KNSFVVAKDNAPIVDITWP-P-S----HPRAIYSSLTV------  255 (327)
Q Consensus       193 ~g~~~v~~~~~~~~~~~~~~~d~v~d~~g--~~---~~~~~~l~~~g~~v~~g~~-~-~----~~~~~~~~~~~------  255 (327)
                      ||+++++|++..++ ....++|+|||++|  ..   ...+++| ++|+++.++.. . .    ...........      
T Consensus         1 LGAd~vidy~~~~~-~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
T PF13602_consen    1 LGADEVIDYRDTDF-AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGDLPSFARRLKGRSIRYSFLFSVDPNA   78 (127)
T ss_dssp             CT-SEEEETTCSHH-HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SHHHHHHHHHHCHHCEEECCC-H--HH
T ss_pred             CCcCEEecCCCccc-cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCcccchhhhhcccceEEEEEEecCCCc
Confidence            68999999997777 33578999999999  32   4556777 99999998741 0 0    00112222211      


Q ss_pred             -CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320          256 -SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI  305 (327)
Q Consensus       256 -~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv  305 (327)
                       ..+.++++.+++.+|++++++  .++||++++++|++.+.+++..||+|+
T Consensus        79 ~~~~~l~~l~~l~~~G~l~~~i--~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   79 IRAEALEELAELVAEGKLKPPI--DRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHHHHHHHHHHHHHTTSS---E--EEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             hHHHHHHHHHHHHHCCCeEEee--ccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence             345699999999999999875  578999999999999999999999986

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=98.98  E-value=7e-09  Score=96.99  Aligned_cols=132  Identities=15%  Similarity=0.184  Sum_probs=96.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCC-------------Chh----
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKT-------------KYE----  207 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~-------------~~~----  207 (327)
                      ..++++|+|+| +|++|+++++.|+.+ |+++++.+.++++++.++++|++++ ++..+.             ++.    
T Consensus       162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~l-GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        162 KVPPAKVLVIG-AGVAGLAAIGAAGSL-GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            46899999999 899999999999999 8888889999999999999999865 544321             111    


Q ss_pred             ----hhccCccEEEeCCCC---------chhhhhhhcCCCcEEEeeCCCCCC-------ceee--------EEeecCHHH
Q 020320          208 ----DIEEKFDVLYDTIGD---------CKNSFVVAKDNAPIVDITWPPSHP-------RAIY--------SSLTVSGEI  259 (327)
Q Consensus       208 ----~~~~~~d~v~d~~g~---------~~~~~~~l~~~g~~v~~g~~~~~~-------~~~~--------~~~~~~~~~  259 (327)
                          +..+++|++|+|+|.         ...++..++++|.++.++......       ..+.        ....+..+.
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~  319 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRL  319 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhH
Confidence                112479999999983         267889999999999998642110       1111        111222344


Q ss_pred             HHHHHhHHHCCCceeeeCCC
Q 020320          260 LEKLRPFIESGKLKAQIDPT  279 (327)
Q Consensus       260 ~~~~~~l~~~g~~~~~~~~~  279 (327)
                      ..++.+++.++.++...+.+
T Consensus       320 p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        320 PTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             HHHHHHHHHhCCccHHHHhc
Confidence            45699999999987654444

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.21  E-value=1.9e-05  Score=74.10  Aligned_cols=93  Identities=23%  Similarity=0.338  Sum_probs=73.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCC-------------C-------
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKT-------------K-------  205 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~-------------~-------  205 (327)
                      .++++++|+| +|.+|+++++.++.+ |+.+++.+.++++++.++++|++.+. +..++             +       
T Consensus       162 vp~akVlViG-aG~iGl~Aa~~ak~l-GA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIG-AGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            4679999999 899999999999999 99988889999999999999987642 32110             1       


Q ss_pred             -hhhhccCccEEEeCC---CC--c----hhhhhhhcCCCcEEEeeC
Q 020320          206 -YEDIEEKFDVLYDTI---GD--C----KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       206 -~~~~~~~~d~v~d~~---g~--~----~~~~~~l~~~g~~v~~g~  241 (327)
                       +.+...++|++|+++   |.  +    ...++.+++++.+++++.
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~  285 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAA  285 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeee
Confidence             122235799999998   53  1    567899999999998854

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.14  E-value=2.2e-05  Score=72.14  Aligned_cols=99  Identities=22%  Similarity=0.282  Sum_probs=76.6

Q ss_pred             HHHHHHhc-CCC-CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320          137 AIEGFKTA-GFK-TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       137 a~~~l~~~-~~~-~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d  214 (327)
                      .|+++.+. ++. .|++++|.| .|.+|..+++.++.+ |++++++..++.+...+...|++ +.     ++.+...++|
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~-Ga~ViV~d~dp~ra~~A~~~G~~-v~-----~l~eal~~aD  269 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGL-GARVIVTEVDPICALQAAMDGFR-VM-----TMEEAAELGD  269 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCchhhHHHHhcCCE-ec-----CHHHHHhCCC
Confidence            56666554 444 899999999 899999999999998 99988888888877666666765 22     2344556899


Q ss_pred             EEEeCCCCc----hhhhhhhcCCCcEEEeeCCC
Q 020320          215 VLYDTIGDC----KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       215 ~v~d~~g~~----~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ++++++|..    ...+..+++++.++..|...
T Consensus       270 VVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        270 IFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence            999999854    35678889999998887644

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.00  E-value=9.7e-05  Score=65.29  Aligned_cols=91  Identities=21%  Similarity=0.395  Sum_probs=72.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---h
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---K  224 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~  224 (327)
                      .+++++|+| .|.+|++++..++.+ |+++.+..+++++.+.++++|++.+. .  .+..+...++|++|++++..   .
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~~-Ga~V~v~~r~~~~~~~~~~~G~~~~~-~--~~l~~~l~~aDiVI~t~p~~~i~~  225 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKAL-GANVTVGARKSAHLARITEMGLSPFH-L--SELAEEVGKIDIIFNTIPALVLTK  225 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCeeec-H--HHHHHHhCCCCEEEECCChhhhhH
Confidence            689999999 899999999999998 89888888988888888888876431 1  23344557899999998733   4


Q ss_pred             hhhhhhcCCCcEEEeeCCC
Q 020320          225 NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       225 ~~~~~l~~~g~~v~~g~~~  243 (327)
                      ..+..+++++.++.++..+
T Consensus       226 ~~l~~~~~g~vIIDla~~p  244 (296)
T PRK08306        226 EVLSKMPPEALIIDLASKP  244 (296)
T ss_pred             HHHHcCCCCcEEEEEccCC
Confidence            5667789999988886544

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.95  E-value=9.6e-05  Score=67.61  Aligned_cols=99  Identities=22%  Similarity=0.289  Sum_probs=75.6

Q ss_pred             HHHHHHhc-C-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320          137 AIEGFKTA-G-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       137 a~~~l~~~-~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d  214 (327)
                      .|.++.+. + ...|++|+|.| .|.+|+.+++.++.+ |++++++..++.+...+...|+. +.+     ..+.+.+.|
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~~-Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----leeal~~aD  252 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARGM-GARVIVTEVDPIRALEAAMDGFR-VMT-----MEEAAKIGD  252 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhhC-cCEEEEEeCChhhHHHHHhcCCE-eCC-----HHHHHhcCC
Confidence            44555432 3 47899999999 999999999999998 99988888888777777777763 221     233456789


Q ss_pred             EEEeCCCCc----hhhhhhhcCCCcEEEeeCCC
Q 020320          215 VLYDTIGDC----KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       215 ~v~d~~g~~----~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ++|+++|..    ...+..+++++.++..|...
T Consensus       253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       253 IFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence            999999854    34678899999999887653

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=97.90  E-value=0.00015  Score=63.38  Aligned_cols=159  Identities=19%  Similarity=0.267  Sum_probs=94.8

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhh---hccCc
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVKE----LGADKVIDYRKTKYED---IEEKF  213 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~---~~~~~  213 (327)
                      ...++++++||.+| +|. |..+.++++.. +.  +++.++.+++..+.+++    ++.+.+- ....++..   ....+
T Consensus        72 ~~~~~~g~~VLDiG-~G~-G~~~~~~a~~~-g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d~~~l~~~~~~f  147 (272)
T PRK11873         72 LAELKPGETVLDLG-SGG-GFDCFLAARRV-GPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGEIEALPVADNSV  147 (272)
T ss_pred             hccCCCCCEEEEeC-CCC-CHHHHHHHHHh-CCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcchhhCCCCCCce
Confidence            46788999999999 788 98888888877 54  57778888888888765    3433221 11111211   11368


Q ss_pred             cEEEeC-CC----C----chhhhhhhcCCCcEEEeeCCCCCCc--eeeE------EeecCHHHHHHHHhHHHC-CCceee
Q 020320          214 DVLYDT-IG----D----CKNSFVVAKDNAPIVDITWPPSHPR--AIYS------SLTVSGEILEKLRPFIES-GKLKAQ  275 (327)
Q Consensus       214 d~v~d~-~g----~----~~~~~~~l~~~g~~v~~g~~~~~~~--~~~~------~~~~~~~~~~~~~~l~~~-g~~~~~  275 (327)
                      |+|+.. +-    .    ...+.+.|+++|+++..+.....+.  ....      ..........++.+++++ |-....
T Consensus       148 D~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~  227 (272)
T PRK11873        148 DVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGELPEEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDIT  227 (272)
T ss_pred             eEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCCCHHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceE
Confidence            999844 31    1    2567889999999998765432211  0000      000001123456666665 433333


Q ss_pred             eCCCcccchhhHHHHHHHH--HhCCCCceEEE
Q 020320          276 IDPTGPYKFKDVIEAFRYL--ETGRARGKVVI  305 (327)
Q Consensus       276 ~~~~~~~~~~~i~~a~~~~--~~~~~~gk~vv  305 (327)
                      ......++++++.++++.+  ......++.+.
T Consensus       228 i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  259 (272)
T PRK11873        228 IQPKREYRIPDAREFLEDWGIAPGRQLDGYIV  259 (272)
T ss_pred             EEeccceecccHHHHHHHhccccccccCceEE
Confidence            3345678889999999888  54444444443

>PLN02494 adenosylhomocysteinase

Probab=97.80  E-value=0.00015  Score=67.08  Aligned_cols=88  Identities=23%  Similarity=0.233  Sum_probs=71.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---  223 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  223 (327)
                      -.|++++|.| .|.+|..+++.++.+ |++++++..++.+...+...|+..+      ...+.+..+|+++.+.|..   
T Consensus       252 LaGKtVvViG-yG~IGr~vA~~aka~-Ga~VIV~e~dp~r~~eA~~~G~~vv------~leEal~~ADVVI~tTGt~~vI  323 (477)
T PLN02494        252 IAGKVAVICG-YGDVGKGCAAAMKAA-GARVIVTEIDPICALQALMEGYQVL------TLEDVVSEADIFVTTTGNKDII  323 (477)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhHHHHhcCCeec------cHHHHHhhCCEEEECCCCccch
Confidence            5799999999 999999999999998 9998888788877667777776532      2344556899999998843   


Q ss_pred             -hhhhhhhcCCCcEEEeeCC
Q 020320          224 -KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       224 -~~~~~~l~~~g~~v~~g~~  242 (327)
                       ...+..+++++.++.+|..
T Consensus       324 ~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        324 MVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             HHHHHhcCCCCCEEEEcCCC
Confidence             5678999999999999864

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.59  E-value=0.00032  Score=62.59  Aligned_cols=105  Identities=20%  Similarity=0.277  Sum_probs=73.4

Q ss_pred             cceecCCCCCCHHhhccc-chHHHHHHHHHHhcCC----CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-
Q 020320          113 SLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGF----KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-  186 (327)
Q Consensus       113 ~~~~~~p~~~~~~~aa~~-~~~~~ta~~~l~~~~~----~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-  186 (327)
                      ...+++|+.+..+.+... +.+.  ++++++.+..    .++.+|+|.| +|.+|..+++.++..++.+++++.+++++ 
T Consensus       139 ~~a~~~~k~vr~et~i~~~~~sv--~~~Av~~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra  215 (311)
T cd05213         139 QKAIKVGKRVRTETGISRGAVSI--SSAAVELAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERA  215 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCCCcCH--HHHHHHHHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            456778888877777655 5444  6666654332    4789999999 79999999999988623456666677775 


Q ss_pred             HHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320          187 VEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       187 ~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  223 (327)
                      .++++++|.+ +++.  ++..+.+..+|++|.+++..
T Consensus       216 ~~la~~~g~~-~~~~--~~~~~~l~~aDvVi~at~~~  249 (311)
T cd05213         216 EELAKELGGN-AVPL--DELLELLNEADVVISATGAP  249 (311)
T ss_pred             HHHHHHcCCe-EEeH--HHHHHHHhcCCEEEECCCCC
Confidence            4677888874 3322  12344456799999999865

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.52  E-value=0.0011  Score=57.16  Aligned_cols=138  Identities=19%  Similarity=0.205  Sum_probs=86.4

Q ss_pred             CCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEc
Q 020320           77 TKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVG  156 (327)
Q Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~g  156 (327)
                      +.+++||+++..+             .|.+|.. +...++.+++++++..+.--....  ....+.. ...++++||-.|
T Consensus        65 ~p~~~g~~~~i~p-------------~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~~--~l~~l~~-~~~~~~~VLDiG  127 (250)
T PRK00517         65 HPIRIGDRLWIVP-------------SWEDPPD-PDEINIELDPGMAFGTGTHPTTRL--CLEALEK-LVLPGKTVLDVG  127 (250)
T ss_pred             CCEEEcCCEEEEC-------------CCcCCCC-CCeEEEEECCCCccCCCCCHHHHH--HHHHHHh-hcCCCCEEEEeC
Confidence            3477898877654             4555544 677888898888777654222111  2222322 256889999999


Q ss_pred             CCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHc----CC-CEEEeCCCCChhhhccCccEEEeCCCC------ch
Q 020320          157 GAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKEL----GA-DKVIDYRKTKYEDIEEKFDVLYDTIGD------CK  224 (327)
Q Consensus       157 a~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~----g~-~~v~~~~~~~~~~~~~~~d~v~d~~g~------~~  224 (327)
                       ||. |..++.+++ . |. +++.++.++...+.+++.    +. +.+.-.. .+     ..+|+++.....      ..
T Consensus       128 -cGs-G~l~i~~~~-~-g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~-~~-----~~fD~Vvani~~~~~~~l~~  197 (250)
T PRK00517        128 -CGS-GILAIAAAK-L-GAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ-GD-----LKADVIVANILANPLLELAP  197 (250)
T ss_pred             -CcH-HHHHHHHHH-c-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc-CC-----CCcCEEEEcCcHHHHHHHHH
Confidence             887 887776665 4 55 477788888887776542    22 1111000 00     158999865542      14


Q ss_pred             hhhhhhcCCCcEEEeeC
Q 020320          225 NSFVVAKDNAPIVDITW  241 (327)
Q Consensus       225 ~~~~~l~~~g~~v~~g~  241 (327)
                      ...+.|+++|.++..+.
T Consensus       198 ~~~~~LkpgG~lilsgi  214 (250)
T PRK00517        198 DLARLLKPGGRLILSGI  214 (250)
T ss_pred             HHHHhcCCCcEEEEEEC
Confidence            66788999999988754

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.52  E-value=0.0016  Score=60.49  Aligned_cols=90  Identities=26%  Similarity=0.276  Sum_probs=70.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc-
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC-  223 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-  223 (327)
                      ..-.|++++|.| .|.+|..+++.++.+ |++++++..++.+...+...|+..+      .+.+.++.+|+++.+.|.. 
T Consensus       250 ~~LaGKtVgVIG-~G~IGr~vA~rL~a~-Ga~ViV~e~dp~~a~~A~~~G~~~~------~leell~~ADIVI~atGt~~  321 (476)
T PTZ00075        250 VMIAGKTVVVCG-YGDVGKGCAQALRGF-GARVVVTEIDPICALQAAMEGYQVV------TLEDVVETADIFVTATGNKD  321 (476)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHhcCceec------cHHHHHhcCCEEEECCCccc
Confidence            346799999999 999999999999998 9988887777666545555565422      2445567899999998842 


Q ss_pred             ---hhhhhhhcCCCcEEEeeCC
Q 020320          224 ---KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       224 ---~~~~~~l~~~g~~v~~g~~  242 (327)
                         ...+..|++++.++.+|..
T Consensus       322 iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        322 IITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             ccCHHHHhccCCCcEEEEcCCC
Confidence               4678899999999998754

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.36  E-value=0.0015  Score=59.73  Aligned_cols=92  Identities=24%  Similarity=0.371  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCC-CCChhhhccCccEEEeCC---CC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYR-KTKYEDIEEKFDVLYDTI---GD  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~-~~~~~~~~~~~d~v~d~~---g~  222 (327)
                      ++.+++|+| +|.+|+.+++.++.+ |++++++++++++.+.+. .++........ ...+.+.+..+|++++++   +.
T Consensus       166 ~~~~VlViG-aG~vG~~aa~~a~~l-Ga~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~  243 (370)
T TIGR00518       166 EPGDVTIIG-GGVVGTNAAKMANGL-GATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA  243 (370)
T ss_pred             CCceEEEEc-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence            345699999 799999999999999 888888888887776664 45543222211 123444557899999997   32


Q ss_pred             ------chhhhhhhcCCCcEEEeeC
Q 020320          223 ------CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       223 ------~~~~~~~l~~~g~~v~~g~  241 (327)
                            ....+..+++++.++.++.
T Consensus       244 ~~p~lit~~~l~~mk~g~vIvDva~  268 (370)
T TIGR00518       244 KAPKLVSNSLVAQMKPGAVIVDVAI  268 (370)
T ss_pred             CCCcCcCHHHHhcCCCCCEEEEEec
Confidence                  1456677899999998764

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.32  E-value=0.00051  Score=66.57  Aligned_cols=77  Identities=19%  Similarity=0.405  Sum_probs=57.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC---------------------cccHHHHHHcCCCEEEeCCC
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS---------------------TPKVEFVKELGADKVIDYRK  203 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~---------------------~~~~~~~~~~g~~~v~~~~~  203 (327)
                      ...+|++|+|+| +|++|+++++.++.+ |.+++++...                     +.+++.++++|++..++...
T Consensus       133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~~-G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIG-GGPAGLSAAYHLRRM-GHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence            467899999999 899999999999998 8888877642                     23556778899887665432


Q ss_pred             -CC--hhhhccCccEEEeCCCCc
Q 020320          204 -TK--YEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       204 -~~--~~~~~~~~d~v~d~~g~~  223 (327)
                       .+  ......++|.+|+++|..
T Consensus       211 ~~~~~~~~~~~~~D~Vi~AtG~~  233 (564)
T PRK12771        211 GEDITLEQLEGEFDAVFVAIGAQ  233 (564)
T ss_pred             CCcCCHHHHHhhCCEEEEeeCCC
Confidence             22  222234799999999953

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.20  E-value=0.00072  Score=63.02  Aligned_cols=150  Identities=15%  Similarity=0.234  Sum_probs=91.7

Q ss_pred             CcccccccEEEEEeCCCCCCCCCCCEEEEe-cc-cccccCcCC-----CCCceeeEEEeeccceecCCCCCCHHhhccc-
Q 020320           59 AVPGCDMAGIVVAKGTSVTKFNTGDEVYGN-IQ-DFNAEGKLK-----QLGALAEFIVVEESLIAKKPKNISFEEAASL-  130 (327)
Q Consensus        59 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-~~-~~~~~~~~~-----~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~-  130 (327)
                      ..-|||+++-+.+|+++..+.-+|+.-++- .. -+..|...+     ..+.|+.        .+++|..+..+.+... 
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~--------a~~~~k~v~~~t~i~~~  161 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQK--------AFSVAKRVRTETGIGAG  161 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHhhHhhhcCCCCC
Confidence            345999999999999999887777764411 00 011111001     1122222        2344444433333222 


Q ss_pred             chHHHHHHHHHHhcC----CCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccH-HHHHHcCCCEEEeCCCC
Q 020320          131 PLAVQTAIEGFKTAG----FKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKV-EFVKELGADKVIDYRKT  204 (327)
Q Consensus       131 ~~~~~ta~~~l~~~~----~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~-~~~~~~g~~~v~~~~~~  204 (327)
                      +.+  .++++++.+.    ..++++++|+| +|.+|.+++..++.. |. +++++.+++++. .+++++|.+ +++.  .
T Consensus       162 ~~S--v~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~-G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~  234 (423)
T PRK00045        162 AVS--VASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEK-GVRKITVANRTLERAEELAEEFGGE-AIPL--D  234 (423)
T ss_pred             CcC--HHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--H
Confidence            333  3667775332    36789999999 899999999999987 76 566677887764 467778864 3322  2


Q ss_pred             ChhhhccCccEEEeCCCCc
Q 020320          205 KYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       205 ~~~~~~~~~d~v~d~~g~~  223 (327)
                      +......++|++|+++|+.
T Consensus       235 ~~~~~l~~aDvVI~aT~s~  253 (423)
T PRK00045        235 ELPEALAEADIVISSTGAP  253 (423)
T ss_pred             HHHHHhccCCEEEECCCCC
Confidence            2334456899999999854

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.14  E-value=0.0017  Score=53.01  Aligned_cols=73  Identities=23%  Similarity=0.398  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC---CEEEeCCCCC----hhhhc----cCccEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA---DKVIDYRKTK----YEDIE----EKFDVL  216 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~---~~v~~~~~~~----~~~~~----~~~d~v  216 (327)
                      -|.+|||+||++++|++.++-...+ |.++|+.-+++++++.++..-.   +.+.|-.+.+    +...+    ...+++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLEL-GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            4789999999999999988888888 9999999999999988876442   3333333322    22222    357889


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++|
T Consensus        83 iNNAG   87 (245)
T COG3967          83 INNAG   87 (245)
T ss_pred             eeccc
Confidence            98888

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.13  E-value=0.0024  Score=49.55  Aligned_cols=93  Identities=18%  Similarity=0.347  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHH-HHcCCCE--EEeCCCCChhhhccCccEEEeCCCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFV-KELGADK--VIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~-~~~g~~~--v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      -.+.+++|+| +|+.|.+++..+... |++ +.++-++.+|.+.+ ++++...  ++..  ++.......+|+++++++.
T Consensus        10 l~~~~vlviG-aGg~ar~v~~~L~~~-g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~--~~~~~~~~~~DivI~aT~~   85 (135)
T PF01488_consen   10 LKGKRVLVIG-AGGAARAVAAALAAL-GAKEITIVNRTPERAEALAEEFGGVNIEAIPL--EDLEEALQEADIVINATPS   85 (135)
T ss_dssp             GTTSEEEEES-SSHHHHHHHHHHHHT-TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG--GGHCHHHHTESEEEE-SST
T ss_pred             cCCCEEEEEC-CHHHHHHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHcCccccceeeH--HHHHHHHhhCCeEEEecCC
Confidence            4689999999 799999999999988 887 55555887765444 5664332  2222  2233345689999999874


Q ss_pred             chh--hhhhhcCC----CcEEEeeCCC
Q 020320          223 CKN--SFVVAKDN----APIVDITWPP  243 (327)
Q Consensus       223 ~~~--~~~~l~~~----g~~v~~g~~~  243 (327)
                      ...  .-..+.+.    +.++.++.|.
T Consensus        86 ~~~~i~~~~~~~~~~~~~~v~Dla~Pr  112 (135)
T PF01488_consen   86 GMPIITEEMLKKASKKLRLVIDLAVPR  112 (135)
T ss_dssp             TSTSSTHHHHTTTCHHCSEEEES-SS-
T ss_pred             CCcccCHHHHHHHHhhhhceeccccCC
Confidence            321  11223333    4666776544

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.12  E-value=0.0019  Score=54.34  Aligned_cols=73  Identities=25%  Similarity=0.438  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCC--EE--EeCCCC-Chh-------hhccCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGAD--KV--IDYRKT-KYE-------DIEEKFD  214 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~--~v--~~~~~~-~~~-------~~~~~~d  214 (327)
                      .++.++|+||++++|.++++.+... |++++.+.+..++++.+ .+++..  ..  +|-.+. ...       +....+|
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            4578999999999999999999988 99999999999988666 567731  22  232221 111       1125799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++..|
T Consensus        84 iLvNNAG   90 (246)
T COG4221          84 ILVNNAG   90 (246)
T ss_pred             EEEecCC
Confidence            9999998

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.08  E-value=0.0031  Score=55.48  Aligned_cols=91  Identities=21%  Similarity=0.356  Sum_probs=67.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---h
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---K  224 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~  224 (327)
                      .|++++|+| .|.+|.+++..++.+ |.++++..+++++...+.++|...+ .  -.+..+...++|++++++...   .
T Consensus       150 ~gk~v~IiG-~G~iG~avA~~L~~~-G~~V~v~~R~~~~~~~~~~~g~~~~-~--~~~l~~~l~~aDiVint~P~~ii~~  224 (287)
T TIGR02853       150 HGSNVMVLG-FGRTGMTIARTFSAL-GARVFVGARSSADLARITEMGLIPF-P--LNKLEEKVAEIDIVINTIPALVLTA  224 (287)
T ss_pred             CCCEEEEEc-ChHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeee-c--HHHHHHHhccCCEEEECCChHHhCH
Confidence            578999999 899999999999998 8888888888877777767775432 1  122344557899999998632   3


Q ss_pred             hhhhhhcCCCcEEEeeCCC
Q 020320          225 NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       225 ~~~~~l~~~g~~v~~g~~~  243 (327)
                      ..+..++++..++.++..+
T Consensus       225 ~~l~~~k~~aliIDlas~P  243 (287)
T TIGR02853       225 DVLSKLPKHAVIIDLASKP  243 (287)
T ss_pred             HHHhcCCCCeEEEEeCcCC
Confidence            4566778877777776543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.02  E-value=0.14  Score=45.23  Aligned_cols=151  Identities=18%  Similarity=0.181  Sum_probs=88.2

Q ss_pred             EEEEEeCCCCCCCCCCCEEEEecccc-------------cccCc----CCCCCceeeEEEeeccceecCCCCCCHHhhcc
Q 020320           67 GIVVAKGTSVTKFNTGDEVYGNIQDF-------------NAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAAS  129 (327)
Q Consensus        67 G~V~~vG~~v~~~~~Gd~V~~~~~~~-------------~~~~~----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~  129 (327)
                      |.-.-+-|++.++.+|.|++++-+--             ...+.    ....-.|-+|.++..+..+.-    +.+..-+
T Consensus        37 GfA~VveS~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~----~~e~~~~  112 (314)
T PF11017_consen   37 GFATVVESRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP----EREDWQM  112 (314)
T ss_pred             eEEEEEeeCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCc----chhHHHH
Confidence            33344448889999999999875310             00000    011224555655554443311    2222222


Q ss_pred             cchH-HHHHHHHHH---hcCCCCCCEEEEEcCCchHHHHHHHHHH-hhcCCcEEEEeCCcccHHHHHHcC-CCEEEeCCC
Q 020320          130 LPLA-VQTAIEGFK---TAGFKTGQTIFIVGGAGGVGTLVIQLAK-HFYGASHVVATTSTPKVEFVKELG-ADKVIDYRK  203 (327)
Q Consensus       130 ~~~~-~~ta~~~l~---~~~~~~~~~vlI~ga~g~~G~~a~~la~-~~~g~~~v~~~~~~~~~~~~~~~g-~~~v~~~~~  203 (327)
                      +.-+ +.|.|..-.   ....-..+.|+|..|++-.++..+..++ .. +...++...|.......+.+| .|.|+.+++
T Consensus       113 LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~-~~~~~vglTS~~N~~Fve~lg~Yd~V~~Yd~  191 (314)
T PF11017_consen  113 LLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQR-GPPKVVGLTSARNVAFVESLGCYDEVLTYDD  191 (314)
T ss_pred             HHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccC-CCceEEEEecCcchhhhhccCCceEEeehhh
Confidence            3222 345554322   2334566889999999999999999888 44 555666666667777889999 588887644


Q ss_pred             CChhhhccCccEEEeCCCCc
Q 020320          204 TKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       204 ~~~~~~~~~~d~v~d~~g~~  223 (327)
                      -.... ...--+++|..|..
T Consensus       192 i~~l~-~~~~~v~VDfaG~~  210 (314)
T PF11017_consen  192 IDSLD-APQPVVIVDFAGNG  210 (314)
T ss_pred             hhhcc-CCCCEEEEECCCCH
Confidence            22111 13445777999953

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.02  E-value=0.0063  Score=48.19  Aligned_cols=92  Identities=17%  Similarity=0.232  Sum_probs=65.0

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  223 (327)
                      .-.-.|++++|.| -|.+|..+++.++.+ |++++++..+|-+.-.+..-|.+..      .+.+.....|+++-++|..
T Consensus        18 ~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~-Ga~V~V~e~DPi~alqA~~dGf~v~------~~~~a~~~adi~vtaTG~~   89 (162)
T PF00670_consen   18 NLMLAGKRVVVIG-YGKVGKGIARALRGL-GARVTVTEIDPIRALQAAMDGFEVM------TLEEALRDADIFVTATGNK   89 (162)
T ss_dssp             -S--TTSEEEEE---SHHHHHHHHHHHHT-T-EEEEE-SSHHHHHHHHHTT-EEE-------HHHHTTT-SEEEE-SSSS
T ss_pred             ceeeCCCEEEEeC-CCcccHHHHHHHhhC-CCEEEEEECChHHHHHhhhcCcEec------CHHHHHhhCCEEEECCCCc
Confidence            4456899999999 999999999999999 9999999998887776766676522      2455667899999999853


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCC
Q 020320          224 ----KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~  243 (327)
                          ...+..|+++..+...|...
T Consensus        90 ~vi~~e~~~~mkdgail~n~Gh~d  113 (162)
T PF00670_consen   90 DVITGEHFRQMKDGAILANAGHFD  113 (162)
T ss_dssp             SSB-HHHHHHS-TTEEEEESSSST
T ss_pred             cccCHHHHHHhcCCeEEeccCcCc
Confidence                56788899998888887544

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.78  E-value=0.0061  Score=49.67  Aligned_cols=106  Identities=23%  Similarity=0.268  Sum_probs=75.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---  223 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  223 (327)
                      -.|.+|.|+| .|.+|..+++.++.+ |.++++..++........+.+...      .++.+.....|+++.+....   
T Consensus        34 l~g~tvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~~~~~~~~~~~~~------~~l~ell~~aDiv~~~~plt~~T  105 (178)
T PF02826_consen   34 LRGKTVGIIG-YGRIGRAVARRLKAF-GMRVIGYDRSPKPEEGADEFGVEY------VSLDELLAQADIVSLHLPLTPET  105 (178)
T ss_dssp             STTSEEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSCHHHHHHHHTTEEE------SSHHHHHHH-SEEEE-SSSSTTT
T ss_pred             cCCCEEEEEE-EcCCcCeEeeeeecC-CceeEEecccCChhhhccccccee------eehhhhcchhhhhhhhhcccccc
Confidence            4689999999 999999999999998 999999998877665445555321      13555667799999887621   


Q ss_pred             -----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 -----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 -----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                           ...+..++++..++.++-...          +   +-+.+++.+++|++.
T Consensus       106 ~~li~~~~l~~mk~ga~lvN~aRG~~----------v---de~aL~~aL~~g~i~  147 (178)
T PF02826_consen  106 RGLINAEFLAKMKPGAVLVNVARGEL----------V---DEDALLDALESGKIA  147 (178)
T ss_dssp             TTSBSHHHHHTSTTTEEEEESSSGGG----------B----HHHHHHHHHTTSEE
T ss_pred             ceeeeeeeeeccccceEEEeccchhh----------h---hhhHHHHHHhhccCc
Confidence                 456788898888888753221          1   134678889999987

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08324 short chain dehydrogenase; Validated

Probab=96.72  E-value=0.0056  Score=60.76  Aligned_cols=108  Identities=20%  Similarity=0.249  Sum_probs=66.9

Q ss_pred             ceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320          103 ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT  182 (327)
Q Consensus       103 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~  182 (327)
                      ++++|..+++..++.+ +..+.+++....         .......+|++++|+||+|.+|.++++.+... |.+++++.+
T Consensus       386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~---------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~-Ga~Vvl~~r  454 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQR---------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAE-GACVVLADL  454 (681)
T ss_pred             hcCCccCCChhhhcce-eeehhhhhhhhc---------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEeC
Confidence            4566766666666655 444555543110         00122346899999999999999999998888 899888888


Q ss_pred             CcccHHHH-HHcCC--CE-EE--eCCCCC-hhhh-------ccCccEEEeCCC
Q 020320          183 STPKVEFV-KELGA--DK-VI--DYRKTK-YEDI-------EEKFDVLYDTIG  221 (327)
Q Consensus       183 ~~~~~~~~-~~~g~--~~-v~--~~~~~~-~~~~-------~~~~d~v~d~~g  221 (327)
                      ++++.+.+ ++++.  .. .+  |-.+.. ....       .+++|++|+++|
T Consensus       455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            87765544 33443  11 11  222211 1111       147999999998

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.69  E-value=0.0089  Score=51.50  Aligned_cols=75  Identities=25%  Similarity=0.380  Sum_probs=52.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcC----CC-EEE--eCCCCChhhhc-------
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELG----AD-KVI--DYRKTKYEDIE-------  210 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g----~~-~v~--~~~~~~~~~~~-------  210 (327)
                      ...+.+++|+||++++|...+..+... |.+++.+.|++++++.+ +++.    .. .++  |-.+.+....+       
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~-g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARR-GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            356789999999999999987777777 99999999999988666 3333    21 133  32222211111       


Q ss_pred             -cCccEEEeCCC
Q 020320          211 -EKFDVLYDTIG  221 (327)
Q Consensus       211 -~~~d~v~d~~g  221 (327)
                       ..+|++++++|
T Consensus        82 ~~~IdvLVNNAG   93 (265)
T COG0300          82 GGPIDVLVNNAG   93 (265)
T ss_pred             CCcccEEEECCC
Confidence             26999999998

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.59  E-value=0.041  Score=51.20  Aligned_cols=149  Identities=15%  Similarity=0.272  Sum_probs=91.7

Q ss_pred             CcccccccEEEEEeCCCCCCCCCCCEEEEeccc----ccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcc
Q 020320           59 AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQD----FNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAAS  129 (327)
Q Consensus        59 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~----~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~  129 (327)
                      ..-|.|+++-+.+|+++..+.-+|+.-++  ++    +..|.     +....+.|++++.++. .+.. -.+++..    
T Consensus        88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~--gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~-~t~i~~~----  159 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDSMVVGETQIL--GQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRT-ETDISAG----  159 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhhhhcCChHHH--HHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhh-hcCCCCC----
Confidence            34588999999999999988777776542  11    11111     1123356777776654 2221 0111110    


Q ss_pred             cchHHHHHHHHH----HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccH-HHHHHcCCCEEEeCCC
Q 020320          130 LPLAVQTAIEGF----KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKV-EFVKELGADKVIDYRK  203 (327)
Q Consensus       130 ~~~~~~ta~~~l----~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~-~~~~~~g~~~v~~~~~  203 (327)
                       +.++  ++.++    +..+..++++++|+| +|.+|..+++.++.. | .+++++.++.++. ++++++|... +..  
T Consensus       160 -~vSv--~~~Av~la~~~~~~l~~~~VlViG-aG~iG~~~a~~L~~~-G~~~V~v~~rs~~ra~~la~~~g~~~-i~~--  231 (417)
T TIGR01035       160 -AVSI--SSAAVELAERIFGSLKGKKALLIG-AGEMGELVAKHLLRK-GVGKILIANRTYERAEDLAKELGGEA-VKF--  231 (417)
T ss_pred             -CcCH--HHHHHHHHHHHhCCccCCEEEEEC-ChHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCeE-eeH--
Confidence             1111  23332    334456789999999 799999999999987 7 5666777777764 4667777642 222  


Q ss_pred             CChhhhccCccEEEeCCCCc
Q 020320          204 TKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       204 ~~~~~~~~~~d~v~d~~g~~  223 (327)
                      .+......++|++|.|++..
T Consensus       232 ~~l~~~l~~aDvVi~aT~s~  251 (417)
T TIGR01035       232 EDLEEYLAEADIVISSTGAP  251 (417)
T ss_pred             HHHHHHHhhCCEEEECCCCC
Confidence            13344557899999999854

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.56  E-value=0.0043  Score=54.14  Aligned_cols=96  Identities=25%  Similarity=0.430  Sum_probs=57.8

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEEEeCCCCChhhhccCccEE
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKVIDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~d~v  216 (327)
                      ++.+++++|++||-+| || -|-.+..+++.. |+++..++.|+++.++++    +.|....+.-...++.+....+|.+
T Consensus        55 ~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~~-g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~~~fD~I  131 (273)
T PF02353_consen   55 CEKLGLKPGDRVLDIG-CG-WGGLAIYAAERY-GCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRDLPGKFDRI  131 (273)
T ss_dssp             HTTTT--TT-EEEEES--T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG---S-SEE
T ss_pred             HHHhCCCCCCEEEEeC-CC-ccHHHHHHHHHc-CcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccccCCCCCEE
Confidence            4678999999999999 77 677888899987 999999999999888774    3453211111112333333478887


Q ss_pred             Ee-----CCCCc------hhhhhhhcCCCcEEEe
Q 020320          217 YD-----TIGDC------KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       217 ~d-----~~g~~------~~~~~~l~~~g~~v~~  239 (327)
                      +.     .+|..      ..+.+.|+|+|+++.-
T Consensus       132 vSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  132 VSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             EEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             EEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            63     23321      4456889999998754

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.50  E-value=0.035  Score=47.15  Aligned_cols=42  Identities=24%  Similarity=0.377  Sum_probs=36.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+++++|+|++|.+|..+++.+... |.+++.+.+++++.+.+
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~   45 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRM   45 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999999999888 99999999887766554

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=96.48  E-value=0.036  Score=45.83  Aligned_cols=101  Identities=17%  Similarity=0.143  Sum_probs=69.6

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc----HHHHHHcCCCEEEeCCCCChh--hhc
Q 020320          137 AIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK----VEFVKELGADKVIDYRKTKYE--DIE  210 (327)
Q Consensus       137 a~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~----~~~~~~~g~~~v~~~~~~~~~--~~~  210 (327)
                      ...+++...++++++||=+|  .+.|..++-+++.. + +++.+.+.++-    ...++.+|.+.|.....+...  ...
T Consensus        61 vA~m~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~-~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~  136 (209)
T COG2518          61 VARMLQLLELKPGDRVLEIG--TGSGYQAAVLARLV-G-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEE  136 (209)
T ss_pred             HHHHHHHhCCCCCCeEEEEC--CCchHHHHHHHHHh-C-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCC
Confidence            44456788999999999998  45688889999976 5 77777776663    333567887554322222211  122


Q ss_pred             cCccEEEeCCC--C-chhhhhhhcCCCcEEEeeC
Q 020320          211 EKFDVLYDTIG--D-CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       211 ~~~d~v~d~~g--~-~~~~~~~l~~~g~~v~~g~  241 (327)
                      ..+|.++-+.+  . +...+..|+++|+++..-.
T Consensus       137 aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         137 APYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             CCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence            46899986665  2 3677899999999988644

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.38  E-value=0.0062  Score=49.60  Aligned_cols=68  Identities=19%  Similarity=0.218  Sum_probs=51.5

Q ss_pred             EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCCC
Q 020320          152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g~  222 (327)
                      |+|+||+|.+|...++.+... +.++.+.++++++.+.  ..+.+.+. |..+ +.+...+.++|.+|.++|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~-~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRR-GHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT-TSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHC-CCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            789999999999999999988 8999999999887766  44444332 2222 2234456799999999984

...

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.29  E-value=0.011  Score=56.53  Aligned_cols=79  Identities=19%  Similarity=0.273  Sum_probs=54.9

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-Hc--------CC-----CEEE--eCCC-CC
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-EL--------GA-----DKVI--DYRK-TK  205 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~--------g~-----~~v~--~~~~-~~  205 (327)
                      ..+.+.|++++|+||+|.+|..++..+... |.+++++.++.++...+. ++        |.     -.++  |-.+ ++
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~-G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            466788999999999999999998888877 999999888877654332 11        21     1122  2222 22


Q ss_pred             hhhhccCccEEEeCCCC
Q 020320          206 YEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       206 ~~~~~~~~d~v~d~~g~  222 (327)
                      +...+.++|++|.++|.
T Consensus       153 I~~aLggiDiVVn~AG~  169 (576)
T PLN03209        153 IGPALGNASVVICCIGA  169 (576)
T ss_pred             HHHHhcCCCEEEEcccc
Confidence            33345789999999873

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=96.28  E-value=0.052  Score=44.99  Aligned_cols=96  Identities=17%  Similarity=0.281  Sum_probs=64.4

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHH----HcC-CCEE--EeCCCCChhhhc-c
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVK----ELG-ADKV--IDYRKTKYEDIE-E  211 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~----~~g-~~~v--~~~~~~~~~~~~-~  211 (327)
                      +...++.++++++-.| +|. |..++.+++..+ +.+++.++.+++..+.++    .++ .+.+  +..+..++.... .
T Consensus        33 l~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~  110 (198)
T PRK00377         33 LSKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINE  110 (198)
T ss_pred             HHHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCC
Confidence            4567889999999999 777 888889888762 246778888888777653    456 3332  222222222222 4


Q ss_pred             CccEEEeCCCC------chhhhhhhcCCCcEEE
Q 020320          212 KFDVLYDTIGD------CKNSFVVAKDNAPIVD  238 (327)
Q Consensus       212 ~~d~v~d~~g~------~~~~~~~l~~~g~~v~  238 (327)
                      .+|.+|...+.      ...+.+.|+++|+++.
T Consensus       111 ~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        111 KFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            69999975542      2456678899999874

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.021  Score=49.76  Aligned_cols=71  Identities=21%  Similarity=0.335  Sum_probs=50.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCC-Chhhh-------ccCccEEEeCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKT-KYEDI-------EEKFDVLYDTI  220 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~~-------~~~~d~v~d~~  220 (327)
                      +++||+||+|.+|...++.+... |.+++++.+++++.+.+.+.+...+ .|..+. ...+.       ..++|+++++.
T Consensus         2 k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAA-GYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            47999999999999999888877 9999988888777666655554433 233221 11111       14689999998


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        81 g   81 (274)
T PRK05693         81 G   81 (274)
T ss_pred             C
Confidence            7

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.024  Score=49.59  Aligned_cols=73  Identities=16%  Similarity=0.292  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCC-hh---hhc-----cCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTK-YE---DIE-----EKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~-~~---~~~-----~~~d~v~  217 (327)
                      .+++++|+||+|++|.+.++.+... |.+++++.+++++.+.+.+.+.+.+. |-.+.. ..   +..     ..+|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~-G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSD-GWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4678999999999999998888777 99999999888877766665554332 322211 11   111     3689999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      ++.|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9876

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.17  E-value=0.036  Score=48.20  Aligned_cols=73  Identities=25%  Similarity=0.423  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCE-EE----eCCC-CChh-------hhc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADK-VI----DYRK-TKYE-------DIE  210 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~-v~----~~~~-~~~~-------~~~  210 (327)
                      .|+.|+|+||++++|.+++.-.-.. |++.+.+.+..++++.+    ++.+... ++    |-.+ ++..       ...
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~-G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKR-GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhC-CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            5789999999999998866555556 99999999887777666    3344322 22    2111 1111       123


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|+++++.|
T Consensus        90 g~vDvLVNNAG  100 (282)
T KOG1205|consen   90 GRVDVLVNNAG  100 (282)
T ss_pred             CCCCEEEecCc
Confidence            58999999988

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.08  E-value=0.034  Score=52.97  Aligned_cols=72  Identities=19%  Similarity=0.275  Sum_probs=54.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      +.++++|+|+| .|..|++++.+++.. |+++++.+..+.+.+.++++|...+...+   ....+..+|+++.+.|-
T Consensus         9 ~~~~~~v~V~G-~G~sG~aa~~~L~~~-G~~v~~~D~~~~~~~~l~~~g~~~~~~~~---~~~~l~~~D~VV~SpGi   80 (488)
T PRK03369          9 LLPGAPVLVAG-AGVTGRAVLAALTRF-GARPTVCDDDPDALRPHAERGVATVSTSD---AVQQIADYALVVTSPGF   80 (488)
T ss_pred             ccCCCeEEEEc-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHhCCCEEEcCcc---hHhHhhcCCEEEECCCC
Confidence            45789999999 899999999999998 99999888766666666777875432211   12234578999999883

>PRK06182 short chain dehydrogenase; Validated

Probab=96.05  E-value=0.022  Score=49.61  Aligned_cols=73  Identities=19%  Similarity=0.311  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCC-Chhhhc-------cCccEEEe
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKT-KYEDIE-------EKFDVLYD  218 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~~~-------~~~d~v~d  218 (327)
                      .+++++|+|++|.+|..++..+... |.+++++.+++++.+.+...+...+ .|-.+. ......       .++|++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQ-GYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3678999999999999999888877 9999988888777665554454332 232221 111111       37899999


Q ss_pred             CCC
Q 020320          219 TIG  221 (327)
Q Consensus       219 ~~g  221 (327)
                      +.|
T Consensus        81 ~ag   83 (273)
T PRK06182         81 NAG   83 (273)
T ss_pred             CCC
Confidence            987

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=96.04  E-value=0.063  Score=47.36  Aligned_cols=111  Identities=18%  Similarity=0.088  Sum_probs=66.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC-EEEeCCCCChhhhccCccEEEeCC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD-KVIDYRKTKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~d~v~d~~  220 (327)
                      ..++++||-+| ||. |..++.+++ ++..+++.++.++...+.+++    .+.. .+..............+|+++...
T Consensus       157 ~~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~  233 (288)
T TIGR00406       157 DLKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI  233 (288)
T ss_pred             cCCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence            45789999999 887 877777776 424477788888887766654    2221 111111111111124789998654


Q ss_pred             C-C-----chhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCcee
Q 020320          221 G-D-----CKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKA  274 (327)
Q Consensus       221 g-~-----~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~  274 (327)
                      . .     .....+.|+++|.++..|..              .+....+.+.++++ +..
T Consensus       234 ~~~~l~~ll~~~~~~LkpgG~li~sgi~--------------~~~~~~v~~~~~~~-f~~  278 (288)
T TIGR00406       234 LAEVIKELYPQFSRLVKPGGWLILSGIL--------------ETQAQSVCDAYEQG-FTV  278 (288)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEEEeCc--------------HhHHHHHHHHHHcc-Cce
Confidence            3 1     14556889999998876532              23345566666665 443

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK07060 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.048  Score=46.48  Aligned_cols=73  Identities=21%  Similarity=0.376  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEE-eCCCCC-hhhh---ccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVI-DYRKTK-YEDI---EEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~-~~~~~~-~~~~---~~~~d~v~d~~g  221 (327)
                      .+++++|+|++|.+|..+++.+... |.+++++.+++++.+.+ +..+...+. |..+.. ....   ..++|++|++.|
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag   86 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQR-GARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG   86 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            5689999999999999999999887 88888888877665444 344443322 222211 1111   246899999887

>PRK14967 putative methyltransferase; Provisional

Probab=95.96  E-value=0.31  Score=41.15  Aligned_cols=128  Identities=16%  Similarity=0.160  Sum_probs=74.1

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCE-EEeCCCCChhhhccCccE
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADK-VIDYRKTKYEDIEEKFDV  215 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~~d~  215 (327)
                      +....+.++++||-.| ||. |..+..+++.- ..+++.++.++...+.+++    .+... ++..+-.+. .....+|+
T Consensus        29 l~~~~~~~~~~vLDlG-cG~-G~~~~~la~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~  104 (223)
T PRK14967         29 LAAEGLGPGRRVLDLC-TGS-GALAVAAAAAG-AGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFDV  104 (223)
T ss_pred             HHhcccCCCCeEEEec-CCH-HHHHHHHHHcC-CCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCeeE
Confidence            4455678889999998 777 88888888742 3377788888877765543    34322 222111111 11246899


Q ss_pred             EEeCCC---C---------------------------chhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHh
Q 020320          216 LYDTIG---D---------------------------CKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRP  265 (327)
Q Consensus       216 v~d~~g---~---------------------------~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  265 (327)
                      ++...+   .                           ...+.+.|+++|+++.+.....              .+.++++
T Consensus       105 Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~~~--------------~~~~~~~  170 (223)
T PRK14967        105 VVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQSELS--------------GVERTLT  170 (223)
T ss_pred             EEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEeccc--------------CHHHHHH
Confidence            886422   0                           0235578899999875422110              2345666


Q ss_pred             HHHCCCceeeeCCCcccchhh
Q 020320          266 FIESGKLKAQIDPTGPYKFKD  286 (327)
Q Consensus       266 l~~~g~~~~~~~~~~~~~~~~  286 (327)
                      ++++..+.......+.+++..
T Consensus       171 ~l~~~g~~~~~~~~~~~~~~~  191 (223)
T PRK14967        171 RLSEAGLDAEVVASQWIPFGP  191 (223)
T ss_pred             HHHHCCCCeEEEEeeccCccH
Confidence            676666554433345556644

>PRK06139 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.038  Score=49.76  Aligned_cols=73  Identities=23%  Similarity=0.464  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-E--eCCCC-Chhhh-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-I--DYRKT-KYEDI-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~--~~~~~-~~~~~-------~~~  212 (327)
                      .+++++|+||+|++|.++++.+... |++++++.+++++++.+    ++.|.+.. +  |-.+. .....       ..+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~-G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARR-GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            5689999999999999999988887 99999888887766433    33454432 2  22221 11111       146


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        85 iD~lVnnAG   93 (330)
T PRK06139         85 IDVWVNNVG   93 (330)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.052  Score=46.66  Aligned_cols=72  Identities=24%  Similarity=0.276  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-ccHHHHHHcCCCEEE--eCCC-CChhhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFVKELGADKVI--DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-~~~~~~~~~g~~~v~--~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      .+++++|+||+|++|.+.++.+... |.+++++.+++ ++.+... .+....+  |-.+ ....+...++|++++++|
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~-G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG   88 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAK-GAKVIGLTHSKINNSESND-ESPNEWIKWECGKEESLDKQLASLDVLILNHG   88 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCc
Confidence            3689999999999999988888777 89988888765 2222111 1111222  2221 122233467999999987

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=95.88  E-value=0.084  Score=45.90  Aligned_cols=99  Identities=25%  Similarity=0.463  Sum_probs=67.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhhccCccEEE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      +..+++||+++|=+| ||- |.+++.+|+.. +++++.++-|+++.+.+++    .|...-+.-.-.++.+..+.+|.++
T Consensus        66 ~kl~L~~G~~lLDiG-CGW-G~l~~~aA~~y-~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~e~fDrIv  142 (283)
T COG2230          66 EKLGLKPGMTLLDIG-CGW-GGLAIYAAEEY-GVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFEEPFDRIV  142 (283)
T ss_pred             HhcCCCCCCEEEEeC-CCh-hHHHHHHHHHc-CCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccccccccceee
Confidence            679999999999998 764 77788899987 9999999999998877754    5543111111112222223467665


Q ss_pred             -----eCCCC------chhhhhhhcCCCcEEEeeCCC
Q 020320          218 -----DTIGD------CKNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       218 -----d~~g~------~~~~~~~l~~~g~~v~~g~~~  243 (327)
                           +.+|.      ...+.+.|+++|+++.-....
T Consensus       143 SvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~  179 (283)
T COG2230         143 SVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG  179 (283)
T ss_pred             ehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence                 23443      155678999999998876544

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.83  E-value=0.031  Score=49.97  Aligned_cols=70  Identities=20%  Similarity=0.307  Sum_probs=50.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      +|+|+||+|-+|..++..+... |.++.+.+++.++.......+.+.+. |..+ ..+...+.++|+||.+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence            6999999999999998888877 88888888887655544555655433 2222 234445678999999875

>PRK06057 short chain dehydrogenase; Provisional

Probab=95.82  E-value=0.06  Score=46.34  Aligned_cols=73  Identities=22%  Similarity=0.343  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCC-hhhh-------ccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTK-YEDI-------EEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~-~~~~-------~~~~d~v~  217 (327)
                      .+++++|+||+|.+|.+.++.+... |.+++++.+++.+.+.. ++++...+ .|..+.. ....       ..++|.++
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   84 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF   84 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999888877 99998888876655433 44544322 2222211 1111       13689999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .+.|
T Consensus        85 ~~ag   88 (255)
T PRK06057         85 NNAG   88 (255)
T ss_pred             ECCC
Confidence            8876

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=95.81  E-value=0.038  Score=40.85  Aligned_cols=89  Identities=26%  Similarity=0.300  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-c---C-CCEE-EeCCCC-ChhhhccCccEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-L---G-ADKV-IDYRKT-KYEDIEEKFDVLYDTI  220 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~---g-~~~v-~~~~~~-~~~~~~~~~d~v~d~~  220 (327)
                      |+.+||-+| ||. |..+..+++...+.+++.++.+++..+.+++ .   + .+.+ +...+. ........+|+++...
T Consensus         1 p~~~vLDlG-cG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~   78 (112)
T PF12847_consen    1 PGGRVLDLG-CGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSG   78 (112)
T ss_dssp             TTCEEEEET-TTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECS
T ss_pred             CCCEEEEEc-CcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECC
Confidence            678999998 554 7888888885458999999999998877754 2   2 2222 211111 1122335799999766


Q ss_pred             -C---C---------chhhhhhhcCCCcEEE
Q 020320          221 -G---D---------CKNSFVVAKDNAPIVD  238 (327)
Q Consensus       221 -g---~---------~~~~~~~l~~~g~~v~  238 (327)
                       .   -         .....+.|+|+|+++.
T Consensus        79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             CccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence             2   1         2345678899998875

...

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=95.80  E-value=0.058  Score=49.58  Aligned_cols=102  Identities=23%  Similarity=0.333  Sum_probs=67.3

Q ss_pred             HHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320          136 TAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       136 ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d  214 (327)
                      ..+..+ +..+++++++||-+| || .|..+..+++.. +.+++.++.++++.+.+++......+.....++......+|
T Consensus       154 ~k~~~l~~~l~l~~g~rVLDIG-cG-~G~~a~~la~~~-g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~l~~~fD  230 (383)
T PRK11705        154 AKLDLICRKLQLKPGMRVLDIG-CG-WGGLARYAAEHY-GVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRDLNGQFD  230 (383)
T ss_pred             HHHHHHHHHhCCCCCCEEEEeC-CC-ccHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhhcCCCCC
Confidence            344444 567889999999998 64 677778888876 88999999999999888764321111111112222234688


Q ss_pred             EEEeC-----CCC------chhhhhhhcCCCcEEEee
Q 020320          215 VLYDT-----IGD------CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       215 ~v~d~-----~g~------~~~~~~~l~~~g~~v~~g  240 (327)
                      .++..     +|.      ...+.+.|+|+|.++...
T Consensus       231 ~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        231 RIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             EEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            88643     332      145667999999988754

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=95.78  E-value=0.095  Score=46.86  Aligned_cols=96  Identities=21%  Similarity=0.252  Sum_probs=64.8

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHH----HcCCCEEEeCCCCChhh---hc
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVK----ELGADKVIDYRKTKYED---IE  210 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~---~~  210 (327)
                      .++...++++++||..| +| .|..++.+++.. +.  .++.++.+++..+.++    +.|.+.+..... +...   ..
T Consensus        72 ll~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~-~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~~~~~~~~  147 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIG-GG-TGYNAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DGYYGVPEF  147 (322)
T ss_pred             HHHhcCCCCCCEEEEEe-CC-ccHHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-Chhhccccc
Confidence            34556788999999999 66 599999999876 53  4777778887665553    466654332211 1111   12


Q ss_pred             cCccEEEeCCCC---chhhhhhhcCCCcEEEe
Q 020320          211 EKFDVLYDTIGD---CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       211 ~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~  239 (327)
                      ..+|+++.+.+.   +...++.|+++|+++..
T Consensus       148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            468999987763   25667889999998764

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=95.76  E-value=0.15  Score=41.38  Aligned_cols=116  Identities=16%  Similarity=0.182  Sum_probs=74.0

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEE--EeCCCCChhhhccCcc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKV--IDYRKTKYEDIEEKFD  214 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~~~d  214 (327)
                      +...++++|+.++=.| +| .|..+++++......+++++.+++++.+..+    ++|.+.+  +-.+..........+|
T Consensus        27 ls~L~~~~g~~l~DIG-aG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~~~d  104 (187)
T COG2242          27 LSKLRPRPGDRLWDIG-AG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLPSPD  104 (187)
T ss_pred             HHhhCCCCCCEEEEeC-CC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCCCCC
Confidence            3568889999887777 33 3556667775544678888889999887774    5887654  3222222222334689


Q ss_pred             EEEeCCC-Cc----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCc
Q 020320          215 VLYDTIG-DC----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKL  272 (327)
Q Consensus       215 ~v~d~~g-~~----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~  272 (327)
                      .+|---| ..    +.++..|+++|++|.-..              .-+.+..+++.+++...
T Consensus       105 aiFIGGg~~i~~ile~~~~~l~~ggrlV~nai--------------tlE~~~~a~~~~~~~g~  153 (187)
T COG2242         105 AIFIGGGGNIEEILEAAWERLKPGGRLVANAI--------------TLETLAKALEALEQLGG  153 (187)
T ss_pred             EEEECCCCCHHHHHHHHHHHcCcCCeEEEEee--------------cHHHHHHHHHHHHHcCC
Confidence            9996554 22    677889999999876432              22445555666665444

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.70  E-value=0.07  Score=44.06  Aligned_cols=73  Identities=21%  Similarity=0.274  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc----CCCEEE-eCCC-CChhhhccCccEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL----GADKVI-DYRK-TKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~----g~~~v~-~~~~-~~~~~~~~~~d~v~d~~  220 (327)
                      .+.+++|+|++|.+|.+++..+... |.+++++.++.++.+.+ +++    +..... +..+ .+......++|+++.++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~-g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at  105 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLARE-GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG  105 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence            5689999998899999888877776 78888777777665443 223    322211 1111 22234457899999987


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      .
T Consensus       106 ~  106 (194)
T cd01078         106 A  106 (194)
T ss_pred             C
Confidence            5

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK05872 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.037  Score=49.00  Aligned_cols=73  Identities=19%  Similarity=0.314  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCC--CEE---EeCCCC-Chhh-------hccCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGA--DKV---IDYRKT-KYED-------IEEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~--~~v---~~~~~~-~~~~-------~~~~~  213 (327)
                      .+++++|+|++|++|.++++.+... |++++++.+++++.+.+ ++++.  ...   .|-.+. ....       ....+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHAR-GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988887 99988888877765443 44542  211   122211 1111       12468


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |+++++.|
T Consensus        87 d~vI~nAG   94 (296)
T PRK05872         87 DVVVANAG   94 (296)
T ss_pred             CEEEECCC
Confidence            99999988

>PRK08177 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.093  Score=44.22  Aligned_cols=71  Identities=15%  Similarity=0.244  Sum_probs=47.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh---h---hc--cCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE---D---IE--EKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~---~~--~~~d~v~d~~g  221 (327)
                      ++++|+|++|.+|...+..+... |.+++++.+++++.+.+++++....+..+-.+..   .   ..  .++|+++.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            57999999999999988877777 8999988888777665555442222211111111   1   11  36899998876

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.55  E-value=0.09  Score=45.46  Aligned_cols=73  Identities=26%  Similarity=0.404  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCC-EEEeCCCCChh---hh-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGAD-KVIDYRKTKYE---DI-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~---~~-------~~~~d~  215 (327)
                      .+++++|+||++++|.+++..+... |.+++++.+++++.+.+. +++.. ..+..+-.+..   ..       ..++|+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAE-GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4789999999999999988888877 999988888877665543 34421 12211111111   11       146899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++++.|
T Consensus        84 li~~ag   89 (263)
T PRK06200         84 FVGNAG   89 (263)
T ss_pred             EEECCC
Confidence            998877

>PRK06949 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.072  Score=45.81  Aligned_cols=43  Identities=21%  Similarity=0.406  Sum_probs=36.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      ..+++++|+|++|.+|.+++..+... |++++++.+++++.+.+
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~   49 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKEL   49 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            35789999999999999999888887 99988888887765444

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.092  Score=45.68  Aligned_cols=72  Identities=24%  Similarity=0.355  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcC-CCEE-EeCCCC-Chhh-------hccCccEEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELG-ADKV-IDYRKT-KYED-------IEEKFDVLY  217 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g-~~~v-~~~~~~-~~~~-------~~~~~d~v~  217 (327)
                      +.+++|+||+|++|...+..+... |.++++..+++++.+.+ ++++ ...+ .|-.+. .+..       ...++|+++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAAL-GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV   83 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999999999999988877777 99988888887765443 4454 2221 122221 1111       124689999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      ++.|
T Consensus        84 ~~ag   87 (273)
T PRK07825         84 NNAG   87 (273)
T ss_pred             ECCC
Confidence            9987

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.53  E-value=0.31  Score=45.26  Aligned_cols=78  Identities=13%  Similarity=0.274  Sum_probs=51.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEE-EEeCCcccH-HHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV-VATTSTPKV-EFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v-~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      +--.+.+++|+| +|.+|.+++..+... |+..+ ++-++.++. .++++++...++..  ++....+..+|++|.|+++
T Consensus       177 ~~l~~kkvlviG-aG~~a~~va~~L~~~-g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--~~l~~~l~~aDiVI~aT~a  252 (414)
T PRK13940        177 DNISSKNVLIIG-AGQTGELLFRHVTAL-APKQIMLANRTIEKAQKITSAFRNASAHYL--SELPQLIKKADIIIAAVNV  252 (414)
T ss_pred             cCccCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHhcCCeEecH--HHHHHHhccCCEEEECcCC
Confidence            335678999999 799999988888887 76544 444676654 44456652223221  1223445689999999997


Q ss_pred             chhh
Q 020320          223 CKNS  226 (327)
Q Consensus       223 ~~~~  226 (327)
                      ....
T Consensus       253 ~~~v  256 (414)
T PRK13940        253 LEYI  256 (414)
T ss_pred             CCee
Confidence            6433

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.079  Score=45.80  Aligned_cols=75  Identities=23%  Similarity=0.453  Sum_probs=48.9

Q ss_pred             CCCCCEEEEEcCCc-hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-----cCCCEE--E--eCCCC-Chhhh-----
Q 020320          146 FKTGQTIFIVGGAG-GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-----LGADKV--I--DYRKT-KYEDI-----  209 (327)
Q Consensus       146 ~~~~~~vlI~ga~g-~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-----~g~~~v--~--~~~~~-~~~~~-----  209 (327)
                      +..+++++|+|++| ++|.++++.+... |.++++..+++++.+...+     ++...+  +  |-.+. .....     
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEE-GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            34578999999886 8999999988888 8988888777665543321     443322  2  22111 11111     


Q ss_pred             --ccCccEEEeCCC
Q 020320          210 --EEKFDVLYDTIG  221 (327)
Q Consensus       210 --~~~~d~v~d~~g  221 (327)
                        ...+|+++.+.|
T Consensus        93 ~~~g~id~li~~ag  106 (262)
T PRK07831         93 ERLGRLDVLVNNAG  106 (262)
T ss_pred             HHcCCCCEEEECCC
Confidence              146899999987

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=95.48  E-value=0.22  Score=37.32  Aligned_cols=96  Identities=14%  Similarity=0.226  Sum_probs=62.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEE--EeCCCCC-hhhhccCcc
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKV--IDYRKTK-YEDIEEKFD  214 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v--~~~~~~~-~~~~~~~~d  214 (327)
                      ....+.++++++-+| +|. |..+..+++...+.+++.++.++...+.++    .++.+.+  +..+... .......+|
T Consensus        13 ~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   90 (124)
T TIGR02469        13 SKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPD   90 (124)
T ss_pred             HHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCC
Confidence            455667788999998 766 888889998764567788888888776653    3443322  2221111 111224799


Q ss_pred             EEEeCCC--C----chhhhhhhcCCCcEEEe
Q 020320          215 VLYDTIG--D----CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       215 ~v~d~~g--~----~~~~~~~l~~~g~~v~~  239 (327)
                      .++...+  .    ...+.+.|+++|.++..
T Consensus        91 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        91 RVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             EEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            9986543  1    25677899999998764

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.48  E-value=0.063  Score=46.44  Aligned_cols=73  Identities=23%  Similarity=0.367  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCE-EE--eCCCC-Chhh-------hccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADK-VI--DYRKT-KYED-------IEEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~-v~--~~~~~-~~~~-------~~~~~d~  215 (327)
                      .+++++|+||+|++|.++++.+... |.+++++.+++++.+.+.+ .+... .+  |-.+. ....       ...++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAE-GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            4789999999999999988888777 9999988887766554443 33221 12  22111 1111       1146899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++++.|
T Consensus        83 li~~Ag   88 (262)
T TIGR03325        83 LIPNAG   88 (262)
T ss_pred             EEECCC
Confidence            998876

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12742 oxidoreductase; Provisional

Probab=95.48  E-value=0.099  Score=44.30  Aligned_cols=73  Identities=26%  Similarity=0.429  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHH-HHHHcCCCEEE-eCCCC-Chhhh---ccCccEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVE-FVKELGADKVI-DYRKT-KYEDI---EEKFDVLYDTI  220 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~-~~~~~g~~~v~-~~~~~-~~~~~---~~~~d~v~d~~  220 (327)
                      .+++++|+|++|.+|.++++.+... |.+++.+.+ ++++.+ +..+++...+. |..+. .....   ..++|++++++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTD-GANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            4789999999999999999888877 888776654 444333 33455654332 22111 11111   24589999998


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        84 g   84 (237)
T PRK12742         84 G   84 (237)
T ss_pred             C
Confidence            7

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=95.44  E-value=0.047  Score=47.59  Aligned_cols=91  Identities=19%  Similarity=0.309  Sum_probs=70.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC-CC-EEEeCCCCChhhhccCccEEEeCC---C
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG-AD-KVIDYRKTKYEDIEEKFDVLYDTI---G  221 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g-~~-~v~~~~~~~~~~~~~~~d~v~d~~---g  221 (327)
                      .++ +|.|+| .|.+|.-++.+|--+ |+++.+.+.|.+|++.+..+- .. +.+.++...+.....++|+++.++   |
T Consensus       167 ~~~-kv~iiG-GGvvgtnaAkiA~gl-gA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpg  243 (371)
T COG0686         167 LPA-KVVVLG-GGVVGTNAAKIAIGL-GADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPG  243 (371)
T ss_pred             CCc-cEEEEC-CccccchHHHHHhcc-CCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecC
Confidence            444 567777 799999999999998 999999999999999997644 33 234455566666778999999875   3


Q ss_pred             C------chhhhhhhcCCCcEEEee
Q 020320          222 D------CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       222 ~------~~~~~~~l~~~g~~v~~g  240 (327)
                      .      ....++.|+|++.++++.
T Consensus       244 akaPkLvt~e~vk~MkpGsVivDVA  268 (371)
T COG0686         244 AKAPKLVTREMVKQMKPGSVIVDVA  268 (371)
T ss_pred             CCCceehhHHHHHhcCCCcEEEEEE
Confidence            2      166788999999998874

>PRK04148 hypothetical protein; Provisional

Probab=95.39  E-value=0.1  Score=40.04  Aligned_cols=75  Identities=20%  Similarity=0.173  Sum_probs=50.9

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      .....+.++++.| +| .|...+..++.+ |..+++++.++...+.+++.+.+.+.+.--..-...-+++|++...=.
T Consensus        12 ~~~~~~~kileIG-~G-fG~~vA~~L~~~-G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirp   86 (134)
T PRK04148         12 YEKGKNKKIVELG-IG-FYFKVAKKLKES-GFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRP   86 (134)
T ss_pred             cccccCCEEEEEE-ec-CCHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCC
Confidence            3334568899999 88 887555555567 999999999999999898888765553222211222356777775543

>PRK06196 oxidoreductase; Provisional

Probab=95.38  E-value=0.1  Score=46.63  Aligned_cols=73  Identities=19%  Similarity=0.322  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhh------h----ccCccEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYED------I----EEKFDVL  216 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~------~----~~~~d~v  216 (327)
                      .+++++|+||+|++|.+++..+... |.+++++.+++++.+.+ .++..-..+..+-.+..+      .    ..++|++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~-G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l  103 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQA-GAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL  103 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            4689999999999999988887777 89999888887655433 333211122111112111      1    1468999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      +.++|
T Consensus       104 i~nAg  108 (315)
T PRK06196        104 INNAG  108 (315)
T ss_pred             EECCC
Confidence            99887

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.33  E-value=0.12  Score=45.16  Aligned_cols=73  Identities=21%  Similarity=0.212  Sum_probs=46.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEEeCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVIDYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~----------~~~  211 (327)
                      .++++||+||++  ++|.++++.+... |+++++..++++..+.+    +++|....+..+-.+..+          ...
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQ-GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhC-CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            578999999876  9999988888777 99988877664322222    334533322222222111          124


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      .+|++++++|
T Consensus        85 ~iD~lVnnAG   94 (271)
T PRK06505         85 KLDFVVHAIG   94 (271)
T ss_pred             CCCEEEECCc
Confidence            6899999887

>PRK07814 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.12  Score=44.63  Aligned_cols=41  Identities=17%  Similarity=0.328  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      +++++||+|++|.+|.+.++.+... |.+++++.+++++.+.
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~-G~~Vi~~~r~~~~~~~   49 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEA-GADVLIAARTESQLDE   49 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            5789999999999999999888877 8999888887765543

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.13  Score=45.50  Aligned_cols=73  Identities=22%  Similarity=0.406  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCE-EE--eCCCC-Chhhh-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADK-VI--DYRKT-KYEDI-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~-v~--~~~~~-~~~~~-------~~~  212 (327)
                      .+++++|+||+|++|.+.++.+... |.+++++.+++++.+.+ ++   .+.+. .+  |-.+. .....       ..+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~-G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARR-GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4588999999999999998888777 99999988887665433 22   23221 22  22111 11111       237


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|+++.++|
T Consensus       118 id~li~~AG  126 (293)
T PRK05866        118 VDILINNAG  126 (293)
T ss_pred             CCEEEECCC
Confidence            899999987

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.25  E-value=0.26  Score=39.68  Aligned_cols=94  Identities=18%  Similarity=0.215  Sum_probs=58.3

Q ss_pred             ccchHHHHHHHHHHh-cCCCCCCEEEEEcCCch-HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh
Q 020320          129 SLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAGG-VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY  206 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~-~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (327)
                      ..|+....+...++. ..--.+.+++|+| +|. +|..++..++.. |+++.++.++.+                   +.
T Consensus        23 ~~p~~~~a~v~l~~~~~~~l~gk~vlViG-~G~~~G~~~a~~L~~~-g~~V~v~~r~~~-------------------~l   81 (168)
T cd01080          23 FIPCTPAGILELLKRYGIDLAGKKVVVVG-RSNIVGKPLAALLLNR-NATVTVCHSKTK-------------------NL   81 (168)
T ss_pred             ccCChHHHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHhhC-CCEEEEEECCch-------------------hH
Confidence            334443344444443 3346889999999 564 699888888887 887666555421                   22


Q ss_pred             hhhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCCC
Q 020320          207 EDIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       207 ~~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~~  243 (327)
                      .+.+..+|+||.++++.+. ....++++-.++.++.+.
T Consensus        82 ~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~pr  119 (168)
T cd01080          82 KEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             HHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCC
Confidence            3345568899988886531 113455665666676654

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.25  E-value=0.15  Score=44.12  Aligned_cols=73  Identities=18%  Similarity=0.183  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcccHH----HHHHcCCCEEEeCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTPKVE----FVKELGADKVIDYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~~~~----~~~~~g~~~v~~~~~~~~~~----------~~~  211 (327)
                      .+++++|+||+  +++|.++++.+... |++++++.++++..+    ..++++....+.-+-.+..+          ...
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRAL-GAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            47899999987  48999988877777 899888877654322    22334432233222222211          114


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        88 ~ld~lv~nAg   97 (258)
T PRK07533         88 RLDFLLHSIA   97 (258)
T ss_pred             CCCEEEEcCc
Confidence            6899998876

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.19  E-value=0.28  Score=42.91  Aligned_cols=95  Identities=22%  Similarity=0.246  Sum_probs=66.1

Q ss_pred             ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++....+..++..+ --.|++++|+|.+..+|.-++.++... |+++.+.-+..                   .+..
T Consensus       137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~-gatVtv~~s~t-------------------~~l~  196 (286)
T PRK14175        137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQK-NASVTILHSRS-------------------KDMA  196 (286)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCc-------------------hhHH
Confidence            45665555555566544 357899999996666999999999988 88777665431                   2234


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      +..+.+|++|.++|..+ -.-..++++..++.+|.+.
T Consensus       197 ~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~  233 (286)
T PRK14175        197 SYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTP  233 (286)
T ss_pred             HHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCc
Confidence            45567899999999652 2224578888888888754

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.14  E-value=0.36  Score=38.42  Aligned_cols=96  Identities=20%  Similarity=0.259  Sum_probs=57.2

Q ss_pred             cccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh
Q 020320          128 ASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY  206 (327)
Q Consensus       128 a~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (327)
                      .++|++....+..++..+ --.|++++|.|.+..+|.-...+++.. ++.+.+.-...                   .+.
T Consensus        14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~-~atVt~~h~~T-------------------~~l   73 (160)
T PF02882_consen   14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK-GATVTICHSKT-------------------KNL   73 (160)
T ss_dssp             SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT-T-EEEEE-TTS-------------------SSH
T ss_pred             CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC-CCeEEeccCCC-------------------Ccc
Confidence            344555545555565544 357899999998889999998888887 77665433222                   233


Q ss_pred             hhhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCCC
Q 020320          207 EDIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       207 ~~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~~  243 (327)
                      .+..+.+|+++.++|..+. .-..++++..++.+|...
T Consensus        74 ~~~~~~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~  111 (160)
T PF02882_consen   74 QEITRRADIVVSAVGKPNLIKADWIKPGAVVIDVGINY  111 (160)
T ss_dssp             HHHHTTSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEE
T ss_pred             cceeeeccEEeeeeccccccccccccCCcEEEecCCcc
Confidence            4445678899999986633 335678888888887644

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.12  E-value=0.14  Score=40.36  Aligned_cols=81  Identities=21%  Similarity=0.315  Sum_probs=50.5

Q ss_pred             HHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH-HHHcCCCEEEeCCCCChhhhccCccEEE
Q 020320          140 GFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF-VKELGADKVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       140 ~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      +++...+ ..+.+++|.| +|.+|...+..+...++.++.+..+++++.+. +++++... +.....+..+..+++|+++
T Consensus         9 a~~~~~~~~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dvvi   86 (155)
T cd01065           9 ALEEAGIELKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLEELLAEADLII   86 (155)
T ss_pred             HHHhhCCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchhhccccCCEEE
Confidence            3444443 4578899999 69999988888877622556666677665544 45555431 0001122333357899999


Q ss_pred             eCCCC
Q 020320          218 DTIGD  222 (327)
Q Consensus       218 d~~g~  222 (327)
                      .+++.
T Consensus        87 ~~~~~   91 (155)
T cd01065          87 NTTPV   91 (155)
T ss_pred             eCcCC
Confidence            99863

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.11  E-value=0.1  Score=44.82  Aligned_cols=73  Identities=21%  Similarity=0.327  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCE--EEeCCCCChh---hh-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK--VIDYRKTKYE---DI-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~---~~-------~~~~d~  215 (327)
                      .+++++|+||+|.+|..+++.+... |.+++++.++++......++....  .+..+-.+..   ..       ..++|.
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAK-GARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999999999999988888777 899888888766554444433211  1211111111   11       136899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++.++|
T Consensus        93 vi~~ag   98 (255)
T PRK06841         93 LVNSAG   98 (255)
T ss_pred             EEECCC
Confidence            999887

>PRK05867 short chain dehydrogenase; Provisional

Probab=94.94  E-value=0.16  Score=43.59  Aligned_cols=42  Identities=24%  Similarity=0.339  Sum_probs=34.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+++++|+|+++++|.+++..+... |.+++++.+++++.+.+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   49 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEA-GAQVAIAARHLDALEKL   49 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence            4789999999999999998888877 99998888876655433

>PRK06180 short chain dehydrogenase; Provisional

Probab=94.94  E-value=0.11  Score=45.46  Aligned_cols=74  Identities=22%  Similarity=0.187  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc-CCCE-EE--eCCCC-Chhhh-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL-GADK-VI--DYRKT-KYEDI-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~-g~~~-v~--~~~~~-~~~~~-------~~~~d~  215 (327)
                      .+++++|+|++|.+|.+.++.+... |.+++++.+++++.+.+.+. +... .+  |-.+. .....       ..++|.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAA-GHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhC-cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            3578999999999999998888877 99999988887766555443 2211 12  22211 11111       136899


Q ss_pred             EEeCCCC
Q 020320          216 LYDTIGD  222 (327)
Q Consensus       216 v~d~~g~  222 (327)
                      ++.+.|.
T Consensus        82 vv~~ag~   88 (277)
T PRK06180         82 LVNNAGY   88 (277)
T ss_pred             EEECCCc
Confidence            9999873

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.93  E-value=0.18  Score=43.13  Aligned_cols=41  Identities=27%  Similarity=0.399  Sum_probs=34.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      .+++++|+|++|.+|..+++.+... |.+++++.+++++.+.
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~-G~~vi~~~r~~~~~~~   44 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQK-GAKLALIDLNQEKLEE   44 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            4789999999999999999988887 8888888887665443

>PRK07109 short chain dehydrogenase; Provisional

Probab=94.93  E-value=0.16  Score=45.83  Aligned_cols=73  Identities=18%  Similarity=0.267  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-E--eCCCC-Chhhh-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-I--DYRKT-KYEDI-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~--~~~~~-~~~~~-------~~~  212 (327)
                      .+++++|+||+|++|.++++.+... |.+++++.+++++.+.+    ++.|.+.. +  |-.+. .....       ..+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~-G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~   85 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARR-GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP   85 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            4679999999999999998888877 89998888887765433    23454332 2  22221 11111       246


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        86 iD~lInnAg   94 (334)
T PRK07109         86 IDTWVNNAM   94 (334)
T ss_pred             CCEEEECCC
Confidence            899999987

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=94.91  E-value=0.12  Score=47.19  Aligned_cols=89  Identities=22%  Similarity=0.327  Sum_probs=61.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHHHcC---C-CEEEeCCCC-ChhhhccCccEEEeCCCCc
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVKELG---A-DKVIDYRKT-KYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~~~g---~-~~v~~~~~~-~~~~~~~~~d~v~d~~g~~  223 (327)
                      .+|||+| +|.+|..+++.+... + .++.+++++.++.+.+....   . ...+|-.+. .....+.+.|+|+++....
T Consensus         2 ~~ilviG-aG~Vg~~va~~la~~-~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748           2 MKILVIG-AGGVGSVVAHKLAQN-GDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             CcEEEEC-CchhHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence            5789999 799999999997777 5 78999999988888776553   2 223443332 3444567889999999743


Q ss_pred             --hhhh-hhhcCCCcEEEee
Q 020320          224 --KNSF-VVAKDNAPIVDIT  240 (327)
Q Consensus       224 --~~~~-~~l~~~g~~v~~g  240 (327)
                        ..++ .|++.+=.++...
T Consensus        80 ~~~~i~ka~i~~gv~yvDts   99 (389)
T COG1748          80 VDLTILKACIKTGVDYVDTS   99 (389)
T ss_pred             hhHHHHHHHHHhCCCEEEcc
Confidence              3333 5555565666554

>PRK07677 short chain dehydrogenase; Provisional

Probab=94.90  E-value=0.15  Score=43.85  Aligned_cols=41  Identities=24%  Similarity=0.413  Sum_probs=33.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      +++++|+|++|++|.+.++.+... |.++++..+++++.+.+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~   41 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEE-GANVVITGRTKEKLEEA   41 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            478999999999999998888877 89888888877655433

>PRK12829 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.16  Score=43.76  Aligned_cols=75  Identities=23%  Similarity=0.299  Sum_probs=49.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCC--EEE--eCCCCC-hhh-------hccC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGAD--KVI--DYRKTK-YED-------IEEK  212 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~--~v~--~~~~~~-~~~-------~~~~  212 (327)
                      .-++.++||+||+|.+|..++..+... |.+++++.++++..+.+.+ ....  ..+  |..+.. ...       ...+
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEA-GARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            357789999999999999998888877 8888888887665544433 2211  122  222111 111       1247


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|.++.+.|
T Consensus        87 ~d~vi~~ag   95 (264)
T PRK12829         87 LDVLVNNAG   95 (264)
T ss_pred             CCEEEECCC
Confidence            899998887

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.89  E-value=0.12  Score=50.89  Aligned_cols=74  Identities=16%  Similarity=0.348  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc---------------------cHHHHHHcCCCEEEeCCC---
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP---------------------KVEFVKELGADKVIDYRK---  203 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~---------------------~~~~~~~~g~~~v~~~~~---  203 (327)
                      .+++|+|+| +|+.|+.++..++.. |.++.+....+.                     +.++++++|.+..++..-   
T Consensus       309 ~~kkVaIIG-~GpaGl~aA~~L~~~-G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  386 (639)
T PRK12809        309 RSEKVAVIG-AGPAGLGCADILARA-GVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRD  386 (639)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHc-CCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCc
Confidence            489999999 899999999999988 888888875542                     345667788776554421   


Q ss_pred             CChhhhccCccEEEeCCCCc
Q 020320          204 TKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       204 ~~~~~~~~~~d~v~d~~g~~  223 (327)
                      ..+.....++|.+|.++|..
T Consensus       387 ~~~~~l~~~~DaV~latGa~  406 (639)
T PRK12809        387 ITFSDLTSEYDAVFIGVGTY  406 (639)
T ss_pred             CCHHHHHhcCCEEEEeCCCC
Confidence            12333345799999999853

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.88  E-value=0.19  Score=43.89  Aligned_cols=73  Identities=25%  Similarity=0.308  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcc---cHH-HHHHcCCCEEEeCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTP---KVE-FVKELGADKVIDYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~---~~~-~~~~~g~~~v~~~~~~~~~~----------~~~  211 (327)
                      .+++++|+||+  +++|.++++.+... |+++++..++++   +.+ ..++++....+.-+-.+...          ...
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQ-GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999986  79999988877777 899888777642   222 22345533333221122111          124


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        83 ~iDilVnnAG   92 (274)
T PRK08415         83 KIDFIVHSVA   92 (274)
T ss_pred             CCCEEEECCc
Confidence            6899999887

>PLN03139 formate dehydrogenase; Provisional

Probab=94.88  E-value=0.18  Score=46.31  Aligned_cols=86  Identities=27%  Similarity=0.291  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|++|.|+| .|.+|...++.++.+ |.++++..++....+..++.|+..+     .++.+.....|+++-+....    
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~af-G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~sDvV~l~lPlt~~T~  270 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKPF-NCNLLYHDRLKMDPELEKETGAKFE-----EDLDAMLPKCDVVVINTPLTEKTR  270 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHC-CCEEEEECCCCcchhhHhhcCceec-----CCHHHHHhhCCEEEEeCCCCHHHH
Confidence            578999999 999999999999987 9999888776544444455554321     23555667789998777632    


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          ...+..|+++..++.++
T Consensus       271 ~li~~~~l~~mk~ga~lIN~a  291 (386)
T PLN03139        271 GMFNKERIAKMKKGVLIVNNA  291 (386)
T ss_pred             HHhCHHHHhhCCCCeEEEECC
Confidence                34567777777777664

>PRK08265 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.18  Score=43.54  Aligned_cols=73  Identities=22%  Similarity=0.289  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EE--eCCCC-Chhhh-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VI--DYRKT-KYEDI-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~--~~~~~-~~~~~-------~~~~d~  215 (327)
                      .+++++|+|++|.+|.+++..+... |.+++++.+++++.+.+ ++++... .+  |-.+. .....       ...+|+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999999999999988888877 99998888877654433 4455321 12  22211 11111       146899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++.+.|
T Consensus        84 lv~~ag   89 (261)
T PRK08265         84 LVNLAC   89 (261)
T ss_pred             EEECCC
Confidence            999877

>PRK07574 formate dehydrogenase; Provisional

Probab=94.84  E-value=0.21  Score=45.83  Aligned_cols=86  Identities=22%  Similarity=0.246  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|++|.|+| .|.+|...++.++.+ |.++++..++....+..+.++....     .++.+.....|+|+-+....    
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~f-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~~aDvV~l~lPlt~~T~  263 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPF-DVKLHYTDRHRLPEEVEQELGLTYH-----VSFDSLVSVCDVVTIHCPLHPETE  263 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCCchhhHhhcCceec-----CCHHHHhhcCCEEEEcCCCCHHHH
Confidence            578899999 999999999999987 9999988876544444444553211     23555667889999887632    


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          ...+..|+++..++.++
T Consensus       264 ~li~~~~l~~mk~ga~lIN~a  284 (385)
T PRK07574        264 HLFDADVLSRMKRGSYLVNTA  284 (385)
T ss_pred             HHhCHHHHhcCCCCcEEEECC
Confidence                34567778887777765

>PRK09291 short chain dehydrogenase; Provisional

Probab=94.83  E-value=0.18  Score=43.26  Aligned_cols=72  Identities=24%  Similarity=0.361  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCE-E--EeCCCC-Chhhhc-cCccEEEeC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADK-V--IDYRKT-KYEDIE-EKFDVLYDT  219 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~-v--~~~~~~-~~~~~~-~~~d~v~d~  219 (327)
                      ++++||+|++|.+|..+++.+... |.+++++.+++++...+.    ..+... +  .|..+. ...... .++|++|.+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARK-GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            468999999999999999888887 999998888766544432    223221 1  122221 122222 379999998


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      .|
T Consensus        81 ag   82 (257)
T PRK09291         81 AG   82 (257)
T ss_pred             CC
Confidence            87

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.83  E-value=0.07  Score=45.31  Aligned_cols=69  Identities=20%  Similarity=0.324  Sum_probs=50.8

Q ss_pred             EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc--cHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320          152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP--KVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~--~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      |+|+||+|.+|..+++.+... +.++.+.++++.  ....++..|++.+. |..+ +.+...++++|.||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~-~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSA-GFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT-TGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhC-CCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecC
Confidence            789999999999999998886 899999998764  34455678886542 2221 223345689999998887

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.82  E-value=0.3  Score=42.67  Aligned_cols=95  Identities=20%  Similarity=0.212  Sum_probs=65.2

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++....+..++..++ -.|++|+|.|.+..+|.-.+.++... |+.+.+.-..                   ..+..
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~-gAtVtv~hs~-------------------t~~l~  195 (285)
T PRK14191        136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNA-GASVSVCHIL-------------------TKDLS  195 (285)
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCEEEEEeCC-------------------cHHHH
Confidence            446665555555665554 36999999997779999999999877 8776544221                   11223


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|... -.-..++++..++.+|...
T Consensus       196 ~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        196 FYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINR  232 (285)
T ss_pred             HHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeeccc
Confidence            34567899999999653 2335678999999998654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=94.81  E-value=0.23  Score=42.40  Aligned_cols=73  Identities=23%  Similarity=0.311  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc--HHHHHHcCCCE-EE--eCCCC-Chhh-------hccCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK--VEFVKELGADK-VI--DYRKT-KYED-------IEEKFD  214 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~--~~~~~~~g~~~-v~--~~~~~-~~~~-------~~~~~d  214 (327)
                      .+++++|+|++|.+|.+++..+... |.+++++.+++..  .+.+++++... .+  |-.+. ....       ...++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEA-GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999988888877 8988888775421  22333444322 12  21111 1111       114689


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      .++.+.|
T Consensus        83 ~li~~ag   89 (248)
T TIGR01832        83 ILVNNAG   89 (248)
T ss_pred             EEEECCC
Confidence            9999886

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06500 short chain dehydrogenase; Provisional

Probab=94.81  E-value=0.18  Score=43.04  Aligned_cols=73  Identities=22%  Similarity=0.337  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh----------hccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED----------IEEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~----------~~~~~d~  215 (327)
                      ++++++|+||+|.+|.+.++.+... |++++++.+++++...+ ++++.... +..+-.+..+          ...++|.
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAE-GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999999999999998888877 89888887776554333 44554321 2111111111          1246899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++.+.|
T Consensus        84 vi~~ag   89 (249)
T PRK06500         84 VFINAG   89 (249)
T ss_pred             EEECCC
Confidence            999887

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=94.80  E-value=0.12  Score=45.36  Aligned_cols=90  Identities=20%  Similarity=0.326  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCCCCc-
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC-  223 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-  223 (327)
                      ..+++++|+| +|++|.+++..++.. | .+++++.++.++.+.+ ++++....+.. ..+.......+|++++++... 
T Consensus       121 ~~~k~vlVlG-aGg~a~ai~~aL~~~-g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivInaTp~g~  197 (278)
T PRK00258        121 LKGKRILILG-AGGAARAVILPLLDL-GVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELADFDLIINATSAGM  197 (278)
T ss_pred             CCCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhccccCCEEEECCcCCC
Confidence            4567899999 799999999999888 7 5677777887765444 44442210111 112223446799999997632 


Q ss_pred             -------hhhhhhhcCCCcEEEe
Q 020320          224 -------KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 -------~~~~~~l~~~g~~v~~  239 (327)
                             ......+.+...++++
T Consensus       198 ~~~~~~~~~~~~~l~~~~~v~Di  220 (278)
T PRK00258        198 SGELPLPPLPLSLLRPGTIVYDM  220 (278)
T ss_pred             CCCCCCCCCCHHHcCCCCEEEEe
Confidence                   1122445555555555

>PRK05854 short chain dehydrogenase; Provisional

Probab=94.79  E-value=0.2  Score=44.74  Aligned_cols=40  Identities=20%  Similarity=0.349  Sum_probs=33.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      .+++++|+||++++|.+++..+... |++++++.+++++.+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~-G~~Vil~~R~~~~~~   52 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAA-GAEVILPVRNRAKGE   52 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence            4689999999999999988877777 899998888876544

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.79  E-value=0.88  Score=38.57  Aligned_cols=96  Identities=21%  Similarity=0.255  Sum_probs=58.8

Q ss_pred             HHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCc---EEEEeCC----ccc--------HHHHHHcCCCEEEeCC
Q 020320          139 EGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS---HVVATTS----TPK--------VEFVKELGADKVIDYR  202 (327)
Q Consensus       139 ~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~---~v~~~~~----~~~--------~~~~~~~g~~~v~~~~  202 (327)
                      .+++..+ --.+.+++|+| +|..|.+++..+... |.+   ++++.++    .++        .+++++++... .+  
T Consensus        14 ~al~~~g~~l~~~rvlvlG-AGgAg~aiA~~L~~~-G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~--   88 (226)
T cd05311          14 NALKLVGKKIEEVKIVING-AGAAGIAIARLLLAA-GAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG--   88 (226)
T ss_pred             HHHHHhCCCccCCEEEEEC-chHHHHHHHHHHHHc-CcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc--
Confidence            3444433 34568999999 799999998888877 765   6666666    343        33444443221 11  


Q ss_pred             CCChhhhccCccEEEeCCC-Cc--hhhhhhhcCCCcEEEee
Q 020320          203 KTKYEDIEEKFDVLYDTIG-DC--KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       203 ~~~~~~~~~~~d~v~d~~g-~~--~~~~~~l~~~g~~v~~g  240 (327)
                       .++.+.+.++|+++++++ +.  ...++.++++..++.+.
T Consensus        89 -~~l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          89 -GTLKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             -CCHHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence             234455567999999986 22  34556666665555443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK07478 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.22  Score=42.78  Aligned_cols=42  Identities=24%  Similarity=0.437  Sum_probs=34.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+++++|+|++|++|.+.+..+... |.+++++.+++++.+.+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~   46 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFARE-GAKVVVGARRQAELDQL   46 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4679999999999999988887777 89998888877665443

>PRK08017 oxidoreductase; Provisional

Probab=94.77  E-value=0.078  Score=45.55  Aligned_cols=71  Identities=20%  Similarity=0.317  Sum_probs=50.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCC-hhh---hc-----cCccEEEeC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTK-YED---IE-----EKFDVLYDT  219 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~-~~~---~~-----~~~d~v~d~  219 (327)
                      ++++|+|++|.+|.++++.+... |.+++++.+++++.+.+++.+.+.+. |..+.. ..+   ..     ..+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            57999999999999999998887 88988888888887777777755433 222211 111   11     356888877


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      .|
T Consensus        82 ag   83 (256)
T PRK08017         82 AG   83 (256)
T ss_pred             CC
Confidence            66

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.75  E-value=0.086  Score=48.79  Aligned_cols=73  Identities=22%  Similarity=0.375  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCC-EEE--eCCC-CChhhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGAD-KVI--DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~-~v~--~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      .+++++|+||+|++|.+.+..+... |.+++++.+++++.... ...+.. ..+  |-.+ +...+..+++|+++.+.|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~-G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG  254 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQ-GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG  254 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence            4789999999999999988877766 89998888776554322 111111 122  2222 122233468999998876

>PRK12828 short chain dehydrogenase; Provisional

Probab=94.73  E-value=0.2  Score=42.36  Aligned_cols=39  Identities=23%  Similarity=0.393  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV  187 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~  187 (327)
                      +++++||+|++|.+|..+++.+... |.+++.+.+++++.
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~-G~~v~~~~r~~~~~   44 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAAR-GARVALIGRGAAPL   44 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHC-CCeEEEEeCChHhH
Confidence            4789999999999999988888777 89988888876653

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.73  E-value=0.21  Score=43.22  Aligned_cols=36  Identities=31%  Similarity=0.321  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          148 TGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       148 ~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .++.++|+||++  ++|.++++.+... |+++++..+++
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~-G~~v~~~~r~~   44 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKH-GAELWFTYQSE   44 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHc-CCEEEEEeCch
Confidence            578899999886  8999988777666 89888777663

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=94.70  E-value=0.14  Score=48.47  Aligned_cols=75  Identities=20%  Similarity=0.396  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc---------------------ccHHHHHHcCCCEEEeCCCC-
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST---------------------PKVEFVKELGADKVIDYRKT-  204 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~---------------------~~~~~~~~~g~~~v~~~~~~-  204 (327)
                      ..+++|+|+| +|+.|+.++..++.. |.++++....+                     ...++++++|.+..++..-. 
T Consensus       139 ~~~~~V~IIG-~GpaGl~aA~~l~~~-G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~  216 (467)
T TIGR01318       139 PTGKRVAVIG-AGPAGLACADILARA-GVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR  216 (467)
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC
Confidence            3678999999 899999999999988 88887776543                     13466678887765543211 


Q ss_pred             --ChhhhccCccEEEeCCCCc
Q 020320          205 --KYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       205 --~~~~~~~~~d~v~d~~g~~  223 (327)
                        .......++|.+|.++|..
T Consensus       217 ~~~~~~~~~~~D~vilAtGa~  237 (467)
T TIGR01318       217 DISLDDLLEDYDAVFLGVGTY  237 (467)
T ss_pred             ccCHHHHHhcCCEEEEEeCCC
Confidence              1222224799999999853

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.67  E-value=0.023  Score=53.51  Aligned_cols=94  Identities=16%  Similarity=0.123  Sum_probs=58.1

Q ss_pred             hcCCCCCCEEE----EEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCC-EEEeCCCCChhhhccCccEEE
Q 020320          143 TAGFKTGQTIF----IVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGAD-KVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       143 ~~~~~~~~~vl----I~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      ..++++|+++|    |+||+|++|.+++++++.. |++++.+...+.+.......+.+ .+++.....+...+....   
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~---  103 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGL-GYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKALY---  103 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhC-CCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHHH---
Confidence            46778999998    9999999999999999998 99998876555433222222322 233322222111110000   


Q ss_pred             eCCCCchhhhhhhcCCCcEEEeeCCC
Q 020320          218 DTIGDCKNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       218 d~~g~~~~~~~~l~~~g~~v~~g~~~  243 (327)
                         ......++.|.++|+++.++...
T Consensus       104 ---~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        104 ---EFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             ---HHHHHHHHhccCCCEEEEEcccc
Confidence               01144567788999999887543

>PRK09072 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.24  Score=42.82  Aligned_cols=42  Identities=19%  Similarity=0.434  Sum_probs=34.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+.+++|+||+|.+|...+..+... |.+++++.+++++.+.+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   45 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAA-GARLLLVGRNAEKLEAL   45 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            4678999999999999988888777 89999888887665444

>PRK07904 short chain dehydrogenase; Provisional

Probab=94.64  E-value=0.27  Score=42.33  Aligned_cols=41  Identities=22%  Similarity=0.257  Sum_probs=32.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      +..+++++|+||+|++|.+.++-+...+|.+++++.+++++
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~   45 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDP   45 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcch
Confidence            34678999999999999998876655535888888887664

>PRK07326 short chain dehydrogenase; Provisional

Probab=94.62  E-value=0.24  Score=41.89  Aligned_cols=42  Identities=19%  Similarity=0.348  Sum_probs=34.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+.+++|+||+|.+|..+++.+... |.+++++.+++++...+
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~-g~~V~~~~r~~~~~~~~   46 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAE-GYKVAITARDQKELEEA   46 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEeeCCHHHHHHH
Confidence            4688999999999999998888777 89988888877655433

>PRK08628 short chain dehydrogenase; Provisional

Probab=94.62  E-value=0.26  Score=42.42  Aligned_cols=73  Identities=25%  Similarity=0.370  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH---cCCCE-EEeCCCCChhh---h-------ccCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE---LGADK-VIDYRKTKYED---I-------EEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~---~-------~~~~  213 (327)
                      .++++||+||+|.+|..++..+... |++++++.+++++.+..++   .+... .+..+-.+...   .       ..++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEE-GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999988777777 8998888877766544443   23221 12111111111   1       1368


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |.++.+.|
T Consensus        85 d~vi~~ag   92 (258)
T PRK08628         85 DGLVNNAG   92 (258)
T ss_pred             CEEEECCc
Confidence            99999987

>PRK06194 hypothetical protein; Provisional

Probab=94.61  E-value=0.23  Score=43.55  Aligned_cols=73  Identities=21%  Similarity=0.388  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc---CCCE-EEeCCCCChhh---hc-------cC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL---GADK-VIDYRKTKYED---IE-------EK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~---g~~~-v~~~~~~~~~~---~~-------~~  212 (327)
                      .++++||+||+|.+|...+..+... |.+++++.++.++.+.. +++   +... ++..+-.+..+   ..       .+
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAAL-GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999999999999988888777 89988888776554333 222   3322 12222222211   11       35


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|+++.++|
T Consensus        84 id~vi~~Ag   92 (287)
T PRK06194         84 VHLLFNNAG   92 (287)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.60  E-value=0.15  Score=43.86  Aligned_cols=73  Identities=18%  Similarity=0.219  Sum_probs=45.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCE--EEeCCCCChh---h-------hccCc
Q 020320          148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK--VIDYRKTKYE---D-------IEEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~---~-------~~~~~  213 (327)
                      .+++++|+||+  +++|.++++.+... |.++++..++++..+.++++....  .+.-+-.+..   .       ...++
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQ-GATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999988  79999988887777 999888877643333344442211  1211111111   1       11468


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus        85 D~lv~nAg   92 (252)
T PRK06079         85 DGIVHAIA   92 (252)
T ss_pred             CEEEEccc
Confidence            99998876

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.59  E-value=0.18  Score=45.14  Aligned_cols=73  Identities=16%  Similarity=0.288  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc----C----CCEEE-eCC-CCChhhhccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL----G----ADKVI-DYR-KTKYEDIEEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~----g----~~~v~-~~~-~~~~~~~~~~~d~v~  217 (327)
                      .|++|+|+||+|-+|..++..+... |.+++++.++..+.+...++    +    ...+. |-. ...+.....++|.+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLR-GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence            4789999999999999988877777 88888788766543332221    1    11111 111 122334456799999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .+++
T Consensus        83 h~A~   86 (322)
T PLN02986         83 HTAS   86 (322)
T ss_pred             EeCC
Confidence            8876

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.56  E-value=0.23  Score=39.49  Aligned_cols=73  Identities=23%  Similarity=0.357  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHHHHcCCCEEEeCCC----CChhhh-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFVKELGADKVIDYRK----TKYEDI-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~~~~g~~~v~~~~~----~~~~~~-------~~~~d~  215 (327)
                      +|-.-+|+|+++++|.++++.+... |+.++..+. +..-.+.++++|...++...+    .+....       ..+.|+
T Consensus         8 kglvalvtggasglg~ataerlakq-gasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQ-GASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhc-CceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            4566799999999999998888877 999998885 444567789999876664332    222111       146899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      .++|.|
T Consensus        87 ~vncag   92 (260)
T KOG1199|consen   87 LVNCAG   92 (260)
T ss_pred             eeeccc
Confidence            999998

>PRK07890 short chain dehydrogenase; Provisional

Probab=94.50  E-value=0.27  Score=42.18  Aligned_cols=43  Identities=23%  Similarity=0.377  Sum_probs=35.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      -.+++++|+||+|.+|.+++..+... |.+++++.+++++.+.+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~   45 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARA-GADVVLAARTAERLDEV   45 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            35789999999999999988888877 89998888876654333

>PRK08589 short chain dehydrogenase; Validated

Probab=94.50  E-value=0.23  Score=43.22  Aligned_cols=36  Identities=17%  Similarity=0.239  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .++++||+|+++++|.+++..+... |.+++++.+++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~-G~~vi~~~r~~   40 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQE-GAYVLAVDIAE   40 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCcH
Confidence            5789999999999999988877777 99999888873

>PRK05876 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.25  Score=43.16  Aligned_cols=40  Identities=28%  Similarity=0.413  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      .+++++|+|++|++|.+.+..+... |.+++++.+++++.+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~-G~~Vv~~~r~~~~l~   44 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARR-GARVVLGDVDKPGLR   44 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence            4789999999999999988888877 999888887766544

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.43  E-value=0.5  Score=41.35  Aligned_cols=95  Identities=15%  Similarity=0.246  Sum_probs=66.0

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..++ -.|++++|+|.+..+|.-.+.++... ++++.+.-.                   +..+..
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVt~~hs-------------------~t~~l~  196 (285)
T PRK14189        137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQA-GATVTICHS-------------------KTRDLA  196 (285)
T ss_pred             CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEecC-------------------CCCCHH
Confidence            345554445555555553 47999999998888899999999887 877665321                   223344


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..++++..++.+|...
T Consensus       197 ~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~  233 (285)
T PRK14189        197 AHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNR  233 (285)
T ss_pred             HHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccc
Confidence            45667899999999652 2237789999999998654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.42  E-value=0.28  Score=42.42  Aligned_cols=73  Identities=19%  Similarity=0.275  Sum_probs=44.2

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGG--AGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga--~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~---~-------~~  211 (327)
                      .+++++|+||  ++++|.+.+..+... |+++++..+++...+.+++    .+....+..+-.+..+   .       ..
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQ-GAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5789999996  569999988777777 9988876554332233322    3322222211122111   1       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        84 ~iD~lVnnAG   93 (261)
T PRK08690         84 GLDGLVHSIG   93 (261)
T ss_pred             CCcEEEECCc
Confidence            6899999886

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.42  E-value=0.53  Score=41.17  Aligned_cols=95  Identities=16%  Similarity=0.112  Sum_probs=66.8

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..+. -.|++++|+|.+..+|.-.+.+++.. ++.+.+.-+.                   ..+..
T Consensus       138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~-~atVtv~hs~-------------------T~~l~  197 (285)
T PRK10792        138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLA-GCTVTVCHRF-------------------TKNLR  197 (285)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCeEEEEECC-------------------CCCHH
Confidence            346665556666666554 36999999998777999999999887 7766544322                   12344


Q ss_pred             hhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++.++|.... .-..++++..++.+|...
T Consensus       198 ~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin~  234 (285)
T PRK10792        198 HHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGINR  234 (285)
T ss_pred             HHHhhCCEEEEcCCCcccccHHHcCCCcEEEEccccc
Confidence            455678999999996633 336778888888988654

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.40  E-value=0.14  Score=44.65  Aligned_cols=43  Identities=26%  Similarity=0.473  Sum_probs=36.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      -.|+.++|+|++.++|.+.+..+... |++++++.+++++.+..
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~-Ga~v~i~~r~~~~~~~~   48 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKA-GAKVVITGRSEERLEET   48 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            46789999999999998887777767 99999999988875444

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.40  E-value=0.23  Score=44.48  Aligned_cols=137  Identities=21%  Similarity=0.206  Sum_probs=90.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.||++.+..++.. |.+++...+++. .+..++.++.++      ++.+.+...|++.-.....    
T Consensus       145 ~gktvGIiG-~GrIG~avA~r~~~F-gm~v~y~~~~~~-~~~~~~~~~~y~------~l~ell~~sDii~l~~Plt~~T~  215 (324)
T COG1052         145 RGKTLGIIG-LGRIGQAVARRLKGF-GMKVLYYDRSPN-PEAEKELGARYV------DLDELLAESDIISLHCPLTPETR  215 (324)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhcC-CCEEEEECCCCC-hHHHhhcCceec------cHHHHHHhCCEEEEeCCCChHHh
Confidence            489999999 999999999999966 999999998766 444444555443      1455667889998666521    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhH--HHHHHHHHhC
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDV--IEAFRYLETG  297 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i--~~a~~~~~~~  297 (327)
                          ...+..|++++.++..+--...             +-+.+++.+++|++.---  ..+|..+-.  +..|..+.  
T Consensus       216 hLin~~~l~~mk~ga~lVNtaRG~~V-------------De~ALi~AL~~g~i~gag--lDV~e~Ep~~~d~~l~~l~--  278 (324)
T COG1052         216 HLINAEELAKMKPGAILVNTARGGLV-------------DEQALIDALKSGKIAGAG--LDVFENEPALFDHPLLRLD--  278 (324)
T ss_pred             hhcCHHHHHhCCCCeEEEECCCcccc-------------CHHHHHHHHHhCCcceEE--eeecCCCCCCCChhHhhcc--
Confidence                4567889999998888643311             234678888888886321  233333222  34444332  


Q ss_pred             CCCceEEEEeCCCC
Q 020320          298 RARGKVVISAFPYT  311 (327)
Q Consensus       298 ~~~gk~vv~~~~~~  311 (327)
                       +..++++.++-..
T Consensus       279 -~~~~vvltPHia~  291 (324)
T COG1052         279 -NFPNVVLTPHIAS  291 (324)
T ss_pred             -CCCCEEEcccccc
Confidence             2256777776444

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.38  E-value=0.29  Score=42.70  Aligned_cols=75  Identities=23%  Similarity=0.242  Sum_probs=45.7

Q ss_pred             CCCCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcc---cHH-HHHHcCCCEEEeCCCCChhh----------h
Q 020320          146 FKTGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTP---KVE-FVKELGADKVIDYRKTKYED----------I  209 (327)
Q Consensus       146 ~~~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~---~~~-~~~~~g~~~v~~~~~~~~~~----------~  209 (327)
                      .-.+++++|+||+  +++|.+++..+... |+++++..+++.   +.+ +.++++....+..+-.+..+          .
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~-G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAA-GAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            3457899999986  79999988877777 998887666532   222 22344532222222222111          1


Q ss_pred             ccCccEEEeCCC
Q 020320          210 EEKFDVLYDTIG  221 (327)
Q Consensus       210 ~~~~d~v~d~~g  221 (327)
                      ..++|++++++|
T Consensus        86 ~g~iD~lv~nAG   97 (272)
T PRK08159         86 WGKLDFVVHAIG   97 (272)
T ss_pred             cCCCcEEEECCc
Confidence            146899998876

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.37  E-value=0.54  Score=41.14  Aligned_cols=95  Identities=19%  Similarity=0.201  Sum_probs=65.9

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..++ -.|++++|+|.+..+|.-.+.++... ++.+.+.-.                   +..+..
T Consensus       143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVtv~hs-------------------~T~~l~  202 (287)
T PRK14176        143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNR-NATVSVCHV-------------------FTDDLK  202 (287)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCEEEEEec-------------------cCCCHH
Confidence            446665555556666554 47999999998888999999999887 776544332                   112334


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++.++|.+. -.-..++++..++.+|...
T Consensus       203 ~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin~  239 (287)
T PRK14176        203 KYTLDADILVVATGVKHLIKADMVKEGAVIFDVGITK  239 (287)
T ss_pred             HHHhhCCEEEEccCCccccCHHHcCCCcEEEEecccc
Confidence            44567899999999663 2345788888888998643

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=94.32  E-value=0.15  Score=44.97  Aligned_cols=64  Identities=20%  Similarity=0.262  Sum_probs=54.0

Q ss_pred             HHHHH----HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe---CCcccHHHHHHcCCCEEEeC
Q 020320          137 AIEGF----KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT---TSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       137 a~~~l----~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~---~~~~~~~~~~~~g~~~v~~~  201 (327)
                      ||.++    ..+.+.||.++||-.-+|..|.+.+.++... |++.+++.   .+.+|...++.+|++.|...
T Consensus        87 a~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~-Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp  157 (362)
T KOG1252|consen   87 AWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALR-GYKCIITMPEKMSKEKRILLRALGAEIILTP  157 (362)
T ss_pred             HHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHc-CceEEEEechhhhHHHHHHHHHcCCEEEecC
Confidence            55554    3477999999999999999999999999998 99999887   47889999999999877643

>PRK12939 short chain dehydrogenase; Provisional

Probab=94.31  E-value=0.31  Score=41.53  Aligned_cols=73  Identities=16%  Similarity=0.236  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCE-EEeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADK-VIDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~-v~~~~~~~~~~---~-------~~~  212 (327)
                      .+++++|+|++|.+|...+..+... |.+++++.+++++.+.. +   +.+... ++..+-.+...   .       ..+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEA-GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999998888877 89888887776654433 2   223222 12111111111   1       146


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|.++.++|
T Consensus        85 id~vi~~ag   93 (250)
T PRK12939         85 LDGLVNNAG   93 (250)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK06114 short chain dehydrogenase; Provisional

Probab=94.30  E-value=0.36  Score=41.42  Aligned_cols=37  Identities=24%  Similarity=0.374  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .+++++|+|+++++|.++++.+... |+++++..++++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~-G~~v~~~~r~~~   43 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQA-GADVALFDLRTD   43 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence            4689999999999999998888877 899988887543

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=94.29  E-value=0.059  Score=47.22  Aligned_cols=66  Identities=24%  Similarity=0.259  Sum_probs=45.0

Q ss_pred             EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      |||+||+|-+|...+..+... |.+++++++++++.......+   +.+...........++|.|+.+++
T Consensus         1 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~Vvh~a~   66 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKD-GHEVTILTRSPPAGANTKWEG---YKPWAPLAESEALEGADAVINLAG   66 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHc-CCEEEEEeCCCCCCCccccee---eecccccchhhhcCCCCEEEECCC
Confidence            689999999999999888877 899999888766543221111   111111223344568999999886

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK08862 short chain dehydrogenase; Provisional

Probab=94.26  E-value=0.36  Score=40.90  Aligned_cols=41  Identities=12%  Similarity=0.208  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      .+++++|+|+++++|.+.+..+... |.+++++.+++++.+.
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~   44 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARL-GATLILCDQDQSALKD   44 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHH
Confidence            4689999999999999987777777 9998888887776543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.25  E-value=0.22  Score=42.77  Aligned_cols=74  Identities=16%  Similarity=0.208  Sum_probs=48.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc--CCCEE-EeCCC--CChhhhc-cCccEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL--GADKV-IDYRK--TKYEDIE-EKFDVLYDTI  220 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~--g~~~v-~~~~~--~~~~~~~-~~~d~v~d~~  220 (327)
                      ..+++++|+||+|.+|..++..+... |.++++..+++++.......  ++..+ .|..+  ..+.+.+ .++|++|.+.
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~   93 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAK-GFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT   93 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence            34679999999999999998887776 88888888876654322111  22222 13222  2233444 5899999887


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        94 g   94 (251)
T PLN00141         94 G   94 (251)
T ss_pred             C
Confidence            6

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=94.24  E-value=0.32  Score=41.88  Aligned_cols=70  Identities=19%  Similarity=0.265  Sum_probs=45.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCEEEeCCCCChh---h-------hccCccEE
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADKVIDYRKTKYE---D-------IEEKFDVL  216 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~v~~~~~~~~~---~-------~~~~~d~v  216 (327)
                      +++|+|+++++|.+.++.+... |++++++.+++++.+.+ ++   .+.-+.+..+-.+..   .       ...++|++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKK-GARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899999999999988887777 89988888877654333 22   232122222211111   1       12468999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      +++.|
T Consensus        81 i~naG   85 (259)
T PRK08340         81 VWNAG   85 (259)
T ss_pred             EECCC
Confidence            99877

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=94.23  E-value=0.31  Score=41.94  Aligned_cols=42  Identities=24%  Similarity=0.453  Sum_probs=34.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .++++||+|++|.+|...++.+... |.+++++.++.++.+..
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~   52 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEA-GARVVLSARKAEELEEA   52 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            5689999999999999988888877 99998888877665443

>PLN02928 oxidoreductase family protein

Probab=94.22  E-value=0.24  Score=44.92  Aligned_cols=110  Identities=20%  Similarity=0.256  Sum_probs=71.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC----C-CEEEe--CCCCChhhhccCccEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG----A-DKVID--YRKTKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g----~-~~v~~--~~~~~~~~~~~~~d~v~d~~  220 (327)
                      .|+++.|+| .|.+|..+++.++.+ |.++++..++..+... ..++    . ....+  ....++.+.+...|+++.++
T Consensus       158 ~gktvGIiG-~G~IG~~vA~~l~af-G~~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        158 FGKTVFILG-YGAIGIELAKRLRPF-GVKLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhC-CCEEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            578999999 999999999999998 9999888765332111 1110    0 00000  11234555667899999887


Q ss_pred             CCc--------hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          221 GDC--------KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       221 g~~--------~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                      ...        ...+..|+++..++.++-...          ++   -+.+++.+.+|++.
T Consensus       235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG~l----------Vd---e~AL~~AL~~g~i~  282 (347)
T PLN02928        235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGL----------LD---YDAVLAALESGHLG  282 (347)
T ss_pred             CCChHhhcccCHHHHhcCCCCeEEEECCCccc----------cC---HHHHHHHHHcCCee
Confidence            621        456788899988888763221          11   23567777888875

>PRK05717 oxidoreductase; Validated

Probab=94.21  E-value=0.35  Score=41.51  Aligned_cols=73  Identities=19%  Similarity=0.207  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH-HHHcCCCEE-EeCCCCChhh------h----ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF-VKELGADKV-IDYRKTKYED------I----EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~-~~~~g~~~v-~~~~~~~~~~------~----~~~~d~  215 (327)
                      .|++++|+|++|.+|..++..+... |.+++++.+++++... .++++.... +..+-.+..+      .    ..++|+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4789999999999999988888777 8888888776554433 344543221 1111111111      1    135899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++.+.|
T Consensus        88 li~~ag   93 (255)
T PRK05717         88 LVCNAA   93 (255)
T ss_pred             EEECCC
Confidence            999887

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.21  E-value=0.28  Score=42.17  Aligned_cols=73  Identities=23%  Similarity=0.293  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc--HHHHHHcCCCEE-E--eCCCC-Chhhh-------ccCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK--VEFVKELGADKV-I--DYRKT-KYEDI-------EEKFD  214 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~--~~~~~~~g~~~v-~--~~~~~-~~~~~-------~~~~d  214 (327)
                      .+++++|+|+++++|.++++.+... |++++++.+++..  .+..++.+.... +  |-.+. .....       ..++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKA-GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999998888777 9988877654321  223344443321 2  22221 11111       14689


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      +++++.|
T Consensus        86 ~lv~~ag   92 (251)
T PRK12481         86 ILINNAG   92 (251)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06483 dihydromonapterin reductase; Provisional

Probab=94.21  E-value=0.4  Score=40.58  Aligned_cols=72  Identities=13%  Similarity=0.203  Sum_probs=46.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-HHHHHHcCCCEE-EeCCC-CChhh-------hccCccEEEe
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKV-IDYRK-TKYED-------IEEKFDVLYD  218 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-~~~~~~~g~~~v-~~~~~-~~~~~-------~~~~~d~v~d  218 (327)
                      ++++||+|+++++|.++++.+... |.+++++.+++++ .+.+++.+...+ .|-.+ +....       ...++|.++.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQ-GQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            468999999999999998888777 9999988876543 233344553322 12111 11111       1135899998


Q ss_pred             CCC
Q 020320          219 TIG  221 (327)
Q Consensus       219 ~~g  221 (327)
                      +.|
T Consensus        81 ~ag   83 (236)
T PRK06483         81 NAS   83 (236)
T ss_pred             CCc
Confidence            877

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.18  E-value=0.34  Score=41.68  Aligned_cols=40  Identities=23%  Similarity=0.369  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      .++++||+|++|.+|..++..+... |.+++++.+++++..
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~-G~~v~~~~r~~~~~~   45 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARA-GAAVAIADLNQDGAN   45 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCChHHHH
Confidence            4689999999999999988888877 899888888776543

>PRK08264 short chain dehydrogenase; Validated

Probab=94.14  E-value=0.31  Score=41.26  Aligned_cols=71  Identities=18%  Similarity=0.306  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCC-EEE--eCCC-CChhhh---ccCccEEEeC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGAD-KVI--DYRK-TKYEDI---EEKFDVLYDT  219 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~-~v~--~~~~-~~~~~~---~~~~d~v~d~  219 (327)
                      .+.+++|+||+|.+|..++..+... |. +++++.+++++.+.   .+.. ..+  |-.+ ......   ...+|+++.+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   80 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN   80 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            4678999999999999998888877 87 88778777665432   3222 122  2211 111111   2358999988


Q ss_pred             CCC
Q 020320          220 IGD  222 (327)
Q Consensus       220 ~g~  222 (327)
                      .|.
T Consensus        81 ag~   83 (238)
T PRK08264         81 AGI   83 (238)
T ss_pred             CCc
Confidence            874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=94.14  E-value=0.27  Score=42.31  Aligned_cols=73  Identities=26%  Similarity=0.362  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH---cCCCEE---EeCCCC-Chhhh-------ccCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE---LGADKV---IDYRKT-KYEDI-------EEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~---~g~~~v---~~~~~~-~~~~~-------~~~~  213 (327)
                      .+++++|+||+|.+|.++++.+... |.+++++.+++...+..++   .+.+..   .|-.+. .....       ..++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAE-GARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999988888777 8988888776543333333   233321   122221 11111       1468


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |+++.++|
T Consensus        86 d~lv~nAg   93 (260)
T PRK12823         86 DVLINNVG   93 (260)
T ss_pred             eEEEECCc
Confidence            99999886

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.13  E-value=0.22  Score=49.30  Aligned_cols=75  Identities=19%  Similarity=0.370  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc---------------------cHHHHHHcCCCEEEeCC---
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP---------------------KVEFVKELGADKVIDYR---  202 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~---------------------~~~~~~~~g~~~v~~~~---  202 (327)
                      ..+++|+|+| +|+.|++++..++.+ |.++.+....+.                     +.+.++++|.+...+..   
T Consensus       325 ~~~~~VaIIG-aGpAGLsaA~~L~~~-G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~  402 (654)
T PRK12769        325 KSDKRVAIIG-AGPAGLACADVLARN-GVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGK  402 (654)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCC
Confidence            3588999999 899999999999988 988888775432                     24455677765443321   


Q ss_pred             CCChhhhccCccEEEeCCCCc
Q 020320          203 KTKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       203 ~~~~~~~~~~~d~v~d~~g~~  223 (327)
                      +........++|.+|.++|..
T Consensus       403 ~i~~~~~~~~~DavilAtGa~  423 (654)
T PRK12769        403 DISLESLLEDYDAVFVGVGTY  423 (654)
T ss_pred             cCCHHHHHhcCCEEEEeCCCC
Confidence            112223335799999998853

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=94.13  E-value=0.11  Score=41.73  Aligned_cols=90  Identities=22%  Similarity=0.279  Sum_probs=62.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCC-C--------------------CChh
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYR-K--------------------TKYE  207 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~-~--------------------~~~~  207 (327)
                      ..+|+|+| +|.+|+.|+.+++.+ |+++++.+..+++.+..+..+...+.... .                    ..+.
T Consensus        20 p~~vvv~G-~G~vg~gA~~~~~~l-Ga~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   20 PAKVVVTG-AGRVGQGAAEIAKGL-GAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CeEEEEEC-CCHHHHHHHHHHhHC-CCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            37889999 899999999999999 99999999998888888888765543311 0                    0122


Q ss_pred             hhccCccEEEeCC--CC---c----hhhhhhhcCCCcEEEee
Q 020320          208 DIEEKFDVLYDTI--GD---C----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       208 ~~~~~~d~v~d~~--g~---~----~~~~~~l~~~g~~v~~g  240 (327)
                      +.+..+|+++-+.  +.   +    ...++.|+++..++.+.
T Consensus        98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis  139 (168)
T PF01262_consen   98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS  139 (168)
T ss_dssp             HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred             HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence            2234689988542  21   1    56778888888888774

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK07454 short chain dehydrogenase; Provisional

Probab=94.07  E-value=0.44  Score=40.48  Aligned_cols=42  Identities=17%  Similarity=0.221  Sum_probs=34.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      ..+++++|+|++|.+|..++..+... |.+++++.+++++.+.
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~   45 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKA-GWDLALVARSQDALEA   45 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            34678999999999999988888777 8888888887765433

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.04  E-value=0.41  Score=41.20  Aligned_cols=73  Identities=21%  Similarity=0.357  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc----CCC-EEEeCCCCChhh------hccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL----GAD-KVIDYRKTKYED------IEEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~----g~~-~v~~~~~~~~~~------~~~~~d~  215 (327)
                      .+++++|+|+++++|.+.++.+... |++++++.+++++.+.+ +++    +.. ..+..+-.+..+      ....+|.
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   84 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAE-GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI   84 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence            4789999999999999988888877 89888888876655433 222    222 122111111111      2256899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++.+.|
T Consensus        85 lv~~ag   90 (259)
T PRK06125         85 LVNNAG   90 (259)
T ss_pred             EEECCC
Confidence            999887

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=94.04  E-value=0.38  Score=42.85  Aligned_cols=86  Identities=17%  Similarity=0.205  Sum_probs=56.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .+|.|+| +|.+|.+.+..++.. |.  ++++..+++++.+.+++.|......   .+.......+|+++.|+...    
T Consensus         7 ~~I~IIG-~G~mG~sla~~l~~~-g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~~~~~aDvViiavp~~~~~~   81 (307)
T PRK07502          7 DRVALIG-IGLIGSSLARAIRRL-GLAGEIVGADRSAETRARARELGLGDRVT---TSAAEAVKGADLVILCVPVGASGA   81 (307)
T ss_pred             cEEEEEe-eCHHHHHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHHHhcCCCEEEECCCHHHHHH
Confidence            5799999 999999988888776 63  6777778888888888877532211   12233456789999888632    


Q ss_pred             --hhhhhhhcCCCcEEEee
Q 020320          224 --KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 --~~~~~~l~~~g~~v~~g  240 (327)
                        ......++++..++.++
T Consensus        82 v~~~l~~~l~~~~iv~dvg  100 (307)
T PRK07502         82 VAAEIAPHLKPGAIVTDVG  100 (307)
T ss_pred             HHHHHHhhCCCCCEEEeCc
Confidence              12223445555555443

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.01  E-value=1.2  Score=34.71  Aligned_cols=94  Identities=17%  Similarity=0.142  Sum_probs=63.0

Q ss_pred             cchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320          130 LPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED  208 (327)
Q Consensus       130 ~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (327)
                      +|+.....+..++..+ --.|++++|+|.+..+|.-++.++... |+.+........                   +..+
T Consensus         8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~-gatV~~~~~~t~-------------------~l~~   67 (140)
T cd05212           8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRD-GATVYSCDWKTI-------------------QLQS   67 (140)
T ss_pred             cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeCCCCc-------------------CHHH
Confidence            3444433444455444 357999999999999999999988877 777665553221                   2233


Q ss_pred             hccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          209 IEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       209 ~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ..+.+|+++-++|..+ -.-..+++|-.++.+|...
T Consensus        68 ~v~~ADIVvsAtg~~~~i~~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          68 KVHDADVVVVGSPKPEKVPTEWIKPGATVINCSPTK  103 (140)
T ss_pred             HHhhCCEEEEecCCCCccCHHHcCCCCEEEEcCCCc
Confidence            4566888998888652 3346788888888777543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK07774 short chain dehydrogenase; Provisional

Probab=94.00  E-value=0.37  Score=41.12  Aligned_cols=39  Identities=28%  Similarity=0.408  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV  187 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~  187 (327)
                      .+++++|+|++|.+|...+..+... |.+++++.++++..
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~   43 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGA   43 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHH
Confidence            4678999999999999988888777 89999888876544

>PRK08643 acetoin reductase; Validated

Probab=93.97  E-value=0.4  Score=41.15  Aligned_cols=40  Identities=10%  Similarity=0.202  Sum_probs=33.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      +++++|+|++|.+|...++.+... |.+++++.+++++.+.
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~-G~~v~~~~r~~~~~~~   41 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVED-GFKVAIVDYNEETAQA   41 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            578999999999999998888877 9998888887665433

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=93.97  E-value=0.34  Score=40.48  Aligned_cols=98  Identities=20%  Similarity=0.208  Sum_probs=58.9

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHH----HHcCCCEE--EeCCCCChhhhc
Q 020320          139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFV----KELGADKV--IDYRKTKYEDIE  210 (327)
Q Consensus       139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~----~~~g~~~v--~~~~~~~~~~~~  210 (327)
                      ..++...+++|++||-+|  ++.|..++.+++.. |.  +++.+...++-.+.+    +.++.+.|  +..+...-....
T Consensus        63 ~~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lv-g~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~  139 (209)
T PF01135_consen   63 RMLEALDLKPGDRVLEIG--TGSGYQAALLAHLV-GPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEE  139 (209)
T ss_dssp             HHHHHTTC-TT-EEEEES---TTSHHHHHHHHHH-STTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG
T ss_pred             HHHHHHhcCCCCEEEEec--CCCcHHHHHHHHhc-CccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccC
Confidence            355677899999999998  34566777777766 54  355556666544333    45665443  222211111123


Q ss_pred             cCccEEEeCCC--C-chhhhhhhcCCCcEEEe
Q 020320          211 EKFDVLYDTIG--D-CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       211 ~~~d~v~d~~g--~-~~~~~~~l~~~g~~v~~  239 (327)
                      ..+|.++-+.+  . +...+..|++||+++..
T Consensus       140 apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  140 APFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             -SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             CCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            46899997765  2 35677899999999885

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=93.96  E-value=0.39  Score=41.26  Aligned_cols=38  Identities=21%  Similarity=0.320  Sum_probs=32.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV  187 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~  187 (327)
                      ++++||+|++|.+|.+.+..+... |++++.+.++..+.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~-g~~vi~~~r~~~~~   39 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEE-GYRVAVADINSEKA   39 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHH
Confidence            468999999999999988888877 89998888776654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.94  E-value=0.6  Score=41.01  Aligned_cols=51  Identities=29%  Similarity=0.346  Sum_probs=43.2

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcC
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELG  194 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g  194 (327)
                      ..+.++..+++|+|++.++|++.+..++.. |+.+-++.++..++..+. +++
T Consensus        27 ~~~~k~~~hi~itggS~glgl~la~e~~~~-ga~Vti~ar~~~kl~~a~~~l~   78 (331)
T KOG1210|consen   27 IVKPKPRRHILITGGSSGLGLALALECKRE-GADVTITARSGKKLLEAKAELE   78 (331)
T ss_pred             hcccCccceEEEecCcchhhHHHHHHHHHc-cCceEEEeccHHHHHHHHhhhh
Confidence            355666789999999999999999999998 999999999999887663 444

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=93.94  E-value=0.38  Score=41.89  Aligned_cols=39  Identities=23%  Similarity=0.372  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV  187 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~  187 (327)
                      .+++++|+|++|.+|.+.+..+... |.+++++.+++++.
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~   47 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARA-GAKVAILDRNQEKA   47 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHH
Confidence            4689999999999999998888877 89988888776544

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=93.93  E-value=0.21  Score=43.94  Aligned_cols=72  Identities=19%  Similarity=0.208  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHH-HHHcCCCE-EEeCCC-CChhhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEF-VKELGADK-VIDYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~-~~~~g~~~-v~~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      .+++++|+| +|+.+.+++..+..+ |++ +.++.++.+|.+. +++++... +..... .+.......+|++++|+.
T Consensus       124 ~~k~vlvlG-aGGaarai~~aL~~~-G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp  199 (282)
T TIGR01809       124 AGFRGLVIG-AGGTSRAAVYALASL-GVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVP  199 (282)
T ss_pred             CCceEEEEc-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCC
Confidence            578999999 899999988888888 765 5555677766544 34444211 111111 112233467999999976

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK06914 short chain dehydrogenase; Provisional

Probab=93.92  E-value=0.4  Score=41.80  Aligned_cols=41  Identities=17%  Similarity=0.215  Sum_probs=33.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      ++++||+||+|.+|...+..+... |.+++++.+++++.+.+
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~   43 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENL   43 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence            578999999999999998888877 99998888877655433

>PRK06179 short chain dehydrogenase; Provisional

Probab=93.91  E-value=0.072  Score=46.26  Aligned_cols=71  Identities=14%  Similarity=0.312  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCC-CChhhh-------ccCccEEEe
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRK-TKYEDI-------EEKFDVLYD  218 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~~-------~~~~d~v~d  218 (327)
                      .+++++|+||+|.+|..++..+... |.++++..+++++....  .+...+ .|-.+ ......       .+.+|+++.
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARA-GYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            3568999999999999988888777 99988888775543321  122222 12222 111111       136899999


Q ss_pred             CCC
Q 020320          219 TIG  221 (327)
Q Consensus       219 ~~g  221 (327)
                      +.|
T Consensus        80 ~ag   82 (270)
T PRK06179         80 NAG   82 (270)
T ss_pred             CCC
Confidence            987

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=93.91  E-value=0.17  Score=38.20  Aligned_cols=89  Identities=16%  Similarity=0.192  Sum_probs=54.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-c-HHHHHHcC----C-CEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-K-VEFVKELG----A-DKVIDYRKTKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~-~~~~~~~g----~-~~v~~~~~~~~~~~~~~~d~v~d~~g~~  223 (327)
                      +|.|+||+|.+|...+.++..+...+.+.+..+.. . ..+...++    . +..+..  .+ .....++|++|.|.+.-
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dvvf~a~~~~   77 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD-PEELSDVDVVFLALPHG   77 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS-GHHHTTESEEEE-SCHH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc-hhHhhcCCEEEecCchh
Confidence            58999999999999999998876777666664333 2 22222222    1 222221  11 22347899999999842


Q ss_pred             ---hhhhhhhcCCCcEEEeeCC
Q 020320          224 ---KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       224 ---~~~~~~l~~~g~~v~~g~~  242 (327)
                         ...-..++.+-+++..+..
T Consensus        78 ~~~~~~~~~~~~g~~ViD~s~~   99 (121)
T PF01118_consen   78 ASKELAPKLLKAGIKVIDLSGD   99 (121)
T ss_dssp             HHHHHHHHHHHTTSEEEESSST
T ss_pred             HHHHHHHHHhhCCcEEEeCCHH
Confidence               3334556777778777643

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=93.89  E-value=0.27  Score=44.00  Aligned_cols=73  Identities=16%  Similarity=0.307  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH---c-CC--C-EEE--eCCC-CChhhhccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE---L-GA--D-KVI--DYRK-TKYEDIEEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~---~-g~--~-~v~--~~~~-~~~~~~~~~~d~v~  217 (327)
                      .++++||+||+|.+|..++..+... |.++++..++.++......   . +.  . ..+  |-.+ ..+.....++|.++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   82 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFR-GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF   82 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence            4789999999999999998888877 8888877766554322211   1 11  1 112  2222 22333456799999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .++|
T Consensus        83 h~A~   86 (325)
T PLN02989         83 HTAS   86 (325)
T ss_pred             EeCC
Confidence            9887

>PRK06720 hypothetical protein; Provisional

Probab=93.89  E-value=0.53  Score=37.90  Aligned_cols=39  Identities=23%  Similarity=0.366  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV  187 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~  187 (327)
                      .++.++|.||++++|...+..+... |.++++..++++..
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~-G~~V~l~~r~~~~~   53 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQ-GAKVIVTDIDQESG   53 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEECCHHHH
Confidence            5789999999999999988877766 88888888766544

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=93.88  E-value=1.2  Score=37.20  Aligned_cols=99  Identities=23%  Similarity=0.190  Sum_probs=61.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cCCCEE--EeCCCCChhhhccC
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LGADKV--IDYRKTKYEDIEEK  212 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~~~~~  212 (327)
                      .+....++++++||-+| +| .|..+..+++..+ +.+++.+..+++..+.+++    .|.+.+  +..+..........
T Consensus        68 ~~~~l~~~~g~~VLdIG-~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~~  145 (212)
T PRK13942         68 MCELLDLKEGMKVLEIG-TG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAP  145 (212)
T ss_pred             HHHHcCCCCcCEEEEEC-Cc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCCC
Confidence            34567789999999998 33 4666677777652 2467778888876666543    454332  22221111112246


Q ss_pred             ccEEEeCCC--Cc-hhhhhhhcCCCcEEEee
Q 020320          213 FDVLYDTIG--DC-KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       213 ~d~v~d~~g--~~-~~~~~~l~~~g~~v~~g  240 (327)
                      +|+++-...  .. ......|+++|+++..-
T Consensus       146 fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~  176 (212)
T PRK13942        146 YDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV  176 (212)
T ss_pred             cCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence            899875433  22 56678899999987753

>PRK05875 short chain dehydrogenase; Provisional

Probab=93.84  E-value=0.37  Score=41.89  Aligned_cols=40  Identities=23%  Similarity=0.364  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      ++++++|+|++|.+|..+++.+... |.+++.+.+++++.+
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~-G~~V~~~~r~~~~~~   45 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAA-GAAVMIVGRNPDKLA   45 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHH
Confidence            4689999999999999999988877 898888887766543

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.84  E-value=0.74  Score=40.31  Aligned_cols=95  Identities=19%  Similarity=0.234  Sum_probs=65.9

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..++ -.|++++|.|.+..+|.=.+.++... ++.+.+.-                   ++..+..
T Consensus       134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~aTVtich-------------------s~T~~l~  193 (287)
T PRK14173        134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLRE-DATVTLAH-------------------SKTQDLP  193 (287)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEeC-------------------CCCCCHH
Confidence            346555445555566554 46999999999999999988888876 76554322                   2222334


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       194 ~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~  230 (287)
T PRK14173        194 AVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINR  230 (287)
T ss_pred             HHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcc
Confidence            45567899999999663 3346778999999998755

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=93.84  E-value=0.051  Score=27.77  Aligned_cols=22  Identities=18%  Similarity=0.274  Sum_probs=15.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTP   26 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~   26 (327)
                      |||+++..+++   ++++++|.|.+
T Consensus         1 MkAv~y~G~~~---v~ve~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKD---VRVEEVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTE---EEEEEE----S
T ss_pred             CcceEEeCCCc---eEEEECCCccc
Confidence            89999999888   99999998875

>PRK07024 short chain dehydrogenase; Provisional

Probab=93.82  E-value=0.45  Score=40.96  Aligned_cols=41  Identities=20%  Similarity=0.326  Sum_probs=33.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      +.+++|+|++|.+|...+..+... |.+++++.+++++.+.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~   42 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQ-GATLGLVARRTDALQAF   42 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            468999999999999988888777 89988888877665443

>PRK08226 short chain dehydrogenase; Provisional

Probab=93.81  E-value=0.39  Score=41.41  Aligned_cols=42  Identities=24%  Similarity=0.403  Sum_probs=33.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+++++|+|++|.+|...+..+... |.+++++.++++..+.+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~-G~~Vv~~~r~~~~~~~~   46 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARH-GANLILLDISPEIEKLA   46 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHH
Confidence            4689999999999999998888877 99888887766533333

>PRK06484 short chain dehydrogenase; Validated

Probab=93.81  E-value=0.31  Score=46.77  Aligned_cols=73  Identities=25%  Similarity=0.396  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE---EeCCCC-Chhhh-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV---IDYRKT-KYEDI-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v---~~~~~~-~~~~~-------~~~~d~  215 (327)
                      .+++++|+|+++++|.++++.+... |++++++.++.++.+.+ ++++....   .|-.+. .....       ..++|+
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARA-GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999998888887 99999888877765444 45654321   222221 11111       146899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++++.|
T Consensus        83 li~nag   88 (520)
T PRK06484         83 LVNNAG   88 (520)
T ss_pred             EEECCC
Confidence            998876

>PRK13243 glyoxylate reductase; Reviewed

Probab=93.80  E-value=0.37  Score=43.47  Aligned_cols=104  Identities=23%  Similarity=0.251  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...+..++.+ |.++++..++.... .....+...      .++.+.+...|+++-++...    
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~-G~~V~~~d~~~~~~-~~~~~~~~~------~~l~ell~~aDiV~l~lP~t~~T~  219 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGF-GMRILYYSRTRKPE-AEKELGAEY------RPLEELLRESDFVSLHVPLTKETY  219 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCChh-hHHHcCCEe------cCHHHHHhhCCEEEEeCCCChHHh
Confidence            578999999 999999999999988 99988887765432 233444321      23455567789999887521    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..++++..++.++-....             +-+.+.+.+++|++.
T Consensus       220 ~~i~~~~~~~mk~ga~lIN~aRg~~v-------------d~~aL~~aL~~g~i~  260 (333)
T PRK13243        220 HMINEERLKLMKPTAILVNTARGKVV-------------DTKALVKALKEGWIA  260 (333)
T ss_pred             hccCHHHHhcCCCCeEEEECcCchhc-------------CHHHHHHHHHcCCeE
Confidence                3456677788777776532211             124556666777664

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.78  E-value=0.46  Score=40.22  Aligned_cols=41  Identities=22%  Similarity=0.349  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      ++++++|+|++|.+|...+..+... |.+++++.+++++.+.
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~   44 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAAD-GAKVVIYDSNEEAAEA   44 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChhHHHH
Confidence            4578999999999999998888877 8888888887766443

>PRK06198 short chain dehydrogenase; Provisional

Probab=93.78  E-value=0.38  Score=41.37  Aligned_cols=74  Identities=24%  Similarity=0.438  Sum_probs=46.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHH----HHHHcCCCEE-E--eCCCCC-hhhh-------c
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVE----FVKELGADKV-I--DYRKTK-YEDI-------E  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~----~~~~~g~~~v-~--~~~~~~-~~~~-------~  210 (327)
                      -.+++++|+|++|.+|..+++.+... |.+ ++++.+++++..    .+++.+.... +  |..+.+ ..+.       .
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAER-GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35688999999999999998888877 888 777767655443    2223343321 1  222211 1111       1


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|.++.+.|
T Consensus        83 g~id~li~~ag   93 (260)
T PRK06198         83 GRLDALVNAAG   93 (260)
T ss_pred             CCCCEEEECCC
Confidence            46899999987

>PLN02253 xanthoxin dehydrogenase

Probab=93.75  E-value=0.42  Score=41.66  Aligned_cols=73  Identities=19%  Similarity=0.380  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH-HHHHcCC--C-EEE--eCCCC-Chhhh-------ccCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE-FVKELGA--D-KVI--DYRKT-KYEDI-------EEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~-~~~~~g~--~-~v~--~~~~~-~~~~~-------~~~~  213 (327)
                      .+++++|+|++|.+|.+.+..+... |.++++..++++..+ ..++++.  . ..+  |-.+. .....       ..++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKH-GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999988877777 899888887655433 2333432  1 112  22221 11111       1368


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |.+++++|
T Consensus        96 d~li~~Ag  103 (280)
T PLN02253         96 DIMVNNAG  103 (280)
T ss_pred             CEEEECCC
Confidence            99999886

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=93.73  E-value=0.39  Score=42.85  Aligned_cols=104  Identities=20%  Similarity=0.232  Sum_probs=70.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..++.++..     +.+...  ...++.+.+...|+++.+....    
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~af-G~~V~~~~~~~~~~~-----~~~~~~--~~~~l~e~l~~aDvvv~~lPlt~~T~  205 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTW-GFPLRCWSRSRKSWP-----GVQSFA--GREELSAFLSQTRVLINLLPNTPETV  205 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCCCCCC-----Cceeec--ccccHHHHHhcCCEEEECCCCCHHHH
Confidence            578999999 999999999999987 999988876543321     222111  1234555667899999887632    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..|+++..++.++-....          +   -+.+++.+++|++.
T Consensus       206 ~li~~~~l~~mk~ga~lIN~aRG~vV----------d---e~aL~~aL~~g~i~  246 (312)
T PRK15469        206 GIINQQLLEQLPDGAYLLNLARGVHV----------V---EDDLLAALDSGKVK  246 (312)
T ss_pred             HHhHHHHHhcCCCCcEEEECCCcccc----------C---HHHHHHHHhcCCee
Confidence                3456778888888777633211          1   23556777777765

>PRK06181 short chain dehydrogenase; Provisional

Probab=93.71  E-value=0.42  Score=41.16  Aligned_cols=39  Identities=23%  Similarity=0.456  Sum_probs=32.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      +.++||+|++|.+|..+++.+... |.+++++.+++++.+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~-g~~Vi~~~r~~~~~~   39 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARA-GAQLVLAARNETRLA   39 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence            357999999999999999888877 888888888765543

>PRK07832 short chain dehydrogenase; Provisional

Probab=93.70  E-value=0.33  Score=42.17  Aligned_cols=38  Identities=18%  Similarity=0.319  Sum_probs=31.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      ++++|+||+|++|..+++.+... |++++++.+++++.+
T Consensus         1 k~vlItGas~giG~~la~~la~~-G~~vv~~~r~~~~~~   38 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQ-GAELFLTDRDADGLA   38 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence            36899999999999998888877 888888777766543

>PRK08251 short chain dehydrogenase; Provisional

Probab=93.68  E-value=0.5  Score=40.29  Aligned_cols=41  Identities=22%  Similarity=0.321  Sum_probs=33.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      +++++|+|++|++|...+..+... |.++++..+++++.+.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~-g~~v~~~~r~~~~~~~~   42 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAK-GRDLALCARRTDRLEEL   42 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            468999999999999887777767 88888888877665443

>PRK08618 ornithine cyclodeaminase; Validated

Probab=93.65  E-value=1.6  Score=39.20  Aligned_cols=96  Identities=14%  Similarity=0.091  Sum_probs=61.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHH-HhhcCCcEEEEe-CCcccHHHH-HH----cCCCEEEeCCCCChhhhccCcc
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLA-KHFYGASHVVAT-TSTPKVEFV-KE----LGADKVIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la-~~~~g~~~v~~~-~~~~~~~~~-~~----~g~~~v~~~~~~~~~~~~~~~d  214 (327)
                      +.......++++|+| +|..|.+.+..+ ... +.+.+.+. +++++.+.+ ++    ++.+....   .+..+....+|
T Consensus       120 ~~la~~~~~~v~iiG-aG~~a~~~~~al~~~~-~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~---~~~~~~~~~aD  194 (325)
T PRK08618        120 KYLAREDAKTLCLIG-TGGQAKGQLEAVLAVR-DIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVV---NSADEAIEEAD  194 (325)
T ss_pred             HHhcCCCCcEEEEEC-CcHHHHHHHHHHHhcC-CccEEEEECCCHHHHHHHHHHHHHhcCCcEEEe---CCHHHHHhcCC
Confidence            444445678899999 899997766544 444 66555554 676665433 33    34332221   23445567899


Q ss_pred             EEEeCCCCc--hhhhhhhcCCCcEEEeeCCC
Q 020320          215 VLYDTIGDC--KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       215 ~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~  243 (327)
                      +|+.++++.  ... ..+++|-.+..+|...
T Consensus       195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             EEEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence            999998744  334 8889988888887643

>PRK07856 short chain dehydrogenase; Provisional

Probab=93.64  E-value=0.41  Score=41.00  Aligned_cols=38  Identities=29%  Similarity=0.552  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      .+++++|+||+|.+|.+.++.+... |.+++++.+++++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~-g~~v~~~~r~~~~   42 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAA-GATVVVCGRRAPE   42 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCChhh
Confidence            4789999999999999988888777 8988888876554

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=93.64  E-value=0.92  Score=37.21  Aligned_cols=111  Identities=17%  Similarity=0.112  Sum_probs=70.7

Q ss_pred             ccchHHHHHHHHHHhcCC----------CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHHcCCCE
Q 020320          129 SLPLAVQTAIEGFKTAGF----------KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKELGADK  197 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~----------~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~~g~~~  197 (327)
                      ++|++....+..++..++          -.|++++|+|.+..+|.=.+.++... ++.+.+...+.-.. ....++  .+
T Consensus        32 ~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~-~AtVti~~~~~~~~~~~~~~~--~h  108 (197)
T cd01079          32 ILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLAND-GARVYSVDINGIQVFTRGESI--RH  108 (197)
T ss_pred             ccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEEecCccccccccccc--cc
Confidence            445555555555655443          67999999999999999988888877 88887664322111 000000  00


Q ss_pred             EEe---CCCCChhhhccCccEEEeCCCCchh--hhhhhcCCCcEEEeeCC
Q 020320          198 VID---YRKTKYEDIEEKFDVLYDTIGDCKN--SFVVAKDNAPIVDITWP  242 (327)
Q Consensus       198 v~~---~~~~~~~~~~~~~d~v~d~~g~~~~--~~~~l~~~g~~v~~g~~  242 (327)
                      --.   ..+.+..+..+.+|+++-++|..+.  .-..+++|..++.+|..
T Consensus       109 s~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~  158 (197)
T cd01079         109 EKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASI  158 (197)
T ss_pred             ccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence            000   0001134456789999999997754  56788999999999865

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=93.63  E-value=0.55  Score=41.27  Aligned_cols=61  Identities=18%  Similarity=0.294  Sum_probs=50.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe---CCcccHHHHHHcCCCEEEeCC
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT---TSTPKVEFVKELGADKVIDYR  202 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~---~~~~~~~~~~~~g~~~v~~~~  202 (327)
                      +...+.++||. .+|-+-+|..|.+.+.+|+.+ |.+.+++.   .+.+|..+++.+|++.++...
T Consensus        53 Ae~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~-Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          53 AEKRGLLKPGG-TIVEATSGNTGIALAMVAAAK-GYRLIIVMPETMSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             HHHcCCCCCCC-EEEEcCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence            34567799999 556666999999999999998 99998887   478899999999998877554

>PRK08339 short chain dehydrogenase; Provisional

Probab=93.61  E-value=0.16  Score=44.04  Aligned_cols=42  Identities=17%  Similarity=0.323  Sum_probs=34.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+++++|+|+++++|.++++.+... |++++++.+++++.+.+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   48 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARA-GADVILLSRNEENLKKA   48 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999998888887 99998888876655433

>PRK08317 hypothetical protein; Provisional

Probab=93.61  E-value=0.58  Score=39.52  Aligned_cols=98  Identities=18%  Similarity=0.214  Sum_probs=62.5

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHHc----CCCE-EEeCCCCChhhhccCcc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKEL----GADK-VIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~~----g~~~-v~~~~~~~~~~~~~~~d  214 (327)
                      ++...+.++++||-.| ||. |..+..+++..+ ..+++.++.++...+.+++.    +... +...+..........+|
T Consensus        12 ~~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D   89 (241)
T PRK08317         12 FELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFD   89 (241)
T ss_pred             HHHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCce
Confidence            4567888999999999 776 888888888762 35788888888877777654    1111 11111111111124688


Q ss_pred             EEEeCC--C---C----chhhhhhhcCCCcEEEee
Q 020320          215 VLYDTI--G---D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       215 ~v~d~~--g---~----~~~~~~~l~~~g~~v~~g  240 (327)
                      +++...  .   .    .....++|+++|.++...
T Consensus        90 ~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         90 AVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             EEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            877432  1   1    155678899999998765

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=93.59  E-value=0.56  Score=40.33  Aligned_cols=35  Identities=23%  Similarity=0.407  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .++++||+||++.+|.+.++.+... |++++++.++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~   48 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKA-GADIIITTHG   48 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence            5789999999999999998888877 9998888876

>PRK08263 short chain dehydrogenase; Provisional

Probab=93.56  E-value=0.53  Score=40.95  Aligned_cols=72  Identities=19%  Similarity=0.269  Sum_probs=47.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCE-EEeCCCCChhh---h-------ccCccEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADK-VIDYRKTKYED---I-------EEKFDVL  216 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~-v~~~~~~~~~~---~-------~~~~d~v  216 (327)
                      +++++|+||+|.+|..++..+... |.++++..+++++.+.+.+ ++... .+..+-.+..+   .       ..++|.+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALER-GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999988887777 8888888887766544433 33221 12111122111   1       1468999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      +.+.|
T Consensus        82 i~~ag   86 (275)
T PRK08263         82 VNNAG   86 (275)
T ss_pred             EECCC
Confidence            99987

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.54  E-value=0.59  Score=40.51  Aligned_cols=36  Identities=19%  Similarity=0.278  Sum_probs=28.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          148 TGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       148 ~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .+++++|+||++  ++|.+++..+... |+++++..+++
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~-G~~vil~~r~~   42 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQND   42 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHC-CCEEEEEecch
Confidence            578999999875  8999877777766 88888776653

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.54  E-value=0.5  Score=41.22  Aligned_cols=73  Identities=26%  Similarity=0.444  Sum_probs=45.6

Q ss_pred             CCCCEEEEEcCCchHHHH-HHHHHHhhcCCcEEEEeCCcc-cHHHH---HHcCCC--EEEeCCC-CChhh-------hcc
Q 020320          147 KTGQTIFIVGGAGGVGTL-VIQLAKHFYGASHVVATTSTP-KVEFV---KELGAD--KVIDYRK-TKYED-------IEE  211 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~-a~~la~~~~g~~~v~~~~~~~-~~~~~---~~~g~~--~v~~~~~-~~~~~-------~~~  211 (327)
                      -.|+.|||+||.+++|.+ |.++|+ + |++++..+.+.+ ..+..   ++.|--  .+.|-.+ ++..+       ..+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~-r-g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAK-R-GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHH-h-CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            468999999999999976 566666 5 787777775444 33333   344522  2222222 11111       225


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      .+|++++.+|
T Consensus       114 ~V~ILVNNAG  123 (300)
T KOG1201|consen  114 DVDILVNNAG  123 (300)
T ss_pred             CceEEEeccc
Confidence            7999999998

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.54  E-value=0.42  Score=41.93  Aligned_cols=83  Identities=17%  Similarity=0.257  Sum_probs=54.3

Q ss_pred             HHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeC
Q 020320          141 FKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDT  219 (327)
Q Consensus       141 l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~  219 (327)
                      ++..+ .-.|++++|+|+++.+|...+.++... |+++.+.-+..                   .+..+..+++|+++.+
T Consensus       150 L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~-gatVtv~~~~t-------------------~~L~~~~~~aDIvI~A  209 (283)
T PRK14192        150 LKAYNIELAGKHAVVVGRSAILGKPMAMMLLNA-NATVTICHSRT-------------------QNLPELVKQADIIVGA  209 (283)
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhC-CCEEEEEeCCc-------------------hhHHHHhccCCEEEEc
Confidence            34433 457899999995555999999999887 88443333311                   1122233578899999


Q ss_pred             CCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          220 IGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       220 ~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      +|... -....++++..++.++...
T Consensus       210 tG~~~~v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        210 VGKPELIKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             cCCCCcCCHHHcCCCCEEEEEEEee
Confidence            98542 2235678888888887654

>PRK06128 oxidoreductase; Provisional

Probab=93.49  E-value=0.55  Score=41.55  Aligned_cols=35  Identities=20%  Similarity=0.303  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .++++||+||+|.+|.+++..+... |+++++..++
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~-G~~V~i~~~~   88 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFARE-GADIALNYLP   88 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHc-CCEEEEEeCC
Confidence            4689999999999999988888877 9988876654

>PRK06482 short chain dehydrogenase; Provisional

Probab=93.49  E-value=0.52  Score=40.97  Aligned_cols=71  Identities=20%  Similarity=0.289  Sum_probs=46.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCE-EE--eCCCCC-hhh-------hccCccEEE
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADK-VI--DYRKTK-YED-------IEEKFDVLY  217 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~-v~--~~~~~~-~~~-------~~~~~d~v~  217 (327)
                      +++||+||+|.+|...+..+... |.+++++.+++++.+.+.+ .+... ++  |-.+.. ...       ...++|.+|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57999999999999988877777 8899888888776655433 23221 11  222111 111       124689999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .++|
T Consensus        82 ~~ag   85 (276)
T PRK06482         82 SNAG   85 (276)
T ss_pred             ECCC
Confidence            9887

>PRK08267 short chain dehydrogenase; Provisional

Probab=93.48  E-value=0.52  Score=40.57  Aligned_cols=71  Identities=24%  Similarity=0.408  Sum_probs=47.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcC-CC-EE--EeCCCCC-hhhh--------ccCccE
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELG-AD-KV--IDYRKTK-YEDI--------EEKFDV  215 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g-~~-~v--~~~~~~~-~~~~--------~~~~d~  215 (327)
                      +++||+||+|.+|...+..+... |.++++..+++++.+.+. .++ .. .+  .|-.+.. ..+.        ..++|.
T Consensus         2 k~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            57999999999999998877777 899998888877655443 333 11 11  2222211 1111        236799


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++.++|
T Consensus        81 vi~~ag   86 (260)
T PRK08267         81 LFNNAG   86 (260)
T ss_pred             EEECCC
Confidence            999987

>PLN02780 ketoreductase/ oxidoreductase

Probab=93.47  E-value=0.16  Score=45.47  Aligned_cols=42  Identities=19%  Similarity=0.237  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .|++++|+||++++|.+.+..+... |.+++++.+++++.+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~-G~~Vil~~R~~~~l~~~   93 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARK-GLNLVLVARNPDKLKDV   93 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHC-CCCEEEEECCHHHHHHH
Confidence            4899999999999999887777667 99999999988776544

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=93.47  E-value=0.15  Score=41.21  Aligned_cols=89  Identities=16%  Similarity=0.205  Sum_probs=60.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc---CCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL---GADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      +|.|+||+|-+|....+=|+.+ |-.+.++++++++....+..   ..| +++  .+...+.+.+.|+|+++.|..    
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~R-GHeVTAivRn~~K~~~~~~~~i~q~D-ifd--~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKR-GHEVTAIVRNASKLAARQGVTILQKD-IFD--LTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhC-CCeeEEEEeChHhccccccceeeccc-ccC--hhhhHhhhcCCceEEEeccCCCCCh
Confidence            5789999999999999999988 99999999998887543211   111 111  122235668999999998732    


Q ss_pred             --------hhhhhhhcCC--CcEEEeeCCC
Q 020320          224 --------KNSFVVAKDN--APIVDITWPP  243 (327)
Q Consensus       224 --------~~~~~~l~~~--g~~v~~g~~~  243 (327)
                              ...+..|+..  -|+..+|...
T Consensus        78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          78 DELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence                    1234555553  3666676554

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=93.46  E-value=0.4  Score=39.15  Aligned_cols=72  Identities=26%  Similarity=0.342  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHHHHcCC--CEE-E--eCCCCChhh--------hccCcc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFVKELGA--DKV-I--DYRKTKYED--------IEEKFD  214 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~~~~g~--~~v-~--~~~~~~~~~--------~~~~~d  214 (327)
                      .+..+|.|+++++|.+..+.+... |+++++.+. +.+..+.+.+++.  +|. +  |-++..-.+        .....+
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~-Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKK-GARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhc-CcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            356789999999999998888887 999998884 5556677788875  442 2  222211111        124689


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++|.|
T Consensus        93 vlVncAG   99 (256)
T KOG1200|consen   93 VLVNCAG   99 (256)
T ss_pred             EEEEcCc
Confidence            9999998

>PRK08303 short chain dehydrogenase; Provisional

Probab=93.45  E-value=0.59  Score=41.57  Aligned_cols=35  Identities=23%  Similarity=0.312  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .+++++|+||++++|.++++.+... |++++++.++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~-G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAA-GATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecc
Confidence            4789999999999999998888877 9998888775

>PRK05884 short chain dehydrogenase; Provisional

Probab=93.43  E-value=0.49  Score=39.86  Aligned_cols=70  Identities=17%  Similarity=0.357  Sum_probs=45.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEE-eCCCC-Chhhhc----cCccEEEeCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVI-DYRKT-KYEDIE----EKFDVLYDTIG  221 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~-~~~~~-~~~~~~----~~~d~v~d~~g  221 (327)
                      +++|+||+|.+|.+.++.+... |.++++..+++++.+.+ ++++...+. |-.+. ......    ..+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRND-GHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            5899999999999988888777 89998888877765543 444443322 22221 111111    25899998764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=93.41  E-value=0.55  Score=40.00  Aligned_cols=41  Identities=24%  Similarity=0.335  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      +++++||+||+|.+|..++..+... |.+++.+.++.++...
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~   42 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEE-GAKVAVFDLNREAAEK   42 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHH
Confidence            4688999999999999998888877 8888888877665433

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06398 aldose dehydrogenase; Validated

Probab=93.40  E-value=0.41  Score=41.27  Aligned_cols=38  Identities=21%  Similarity=0.434  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      .++++||+|+++++|.+++..+... |.++++..+++++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~-G~~Vi~~~r~~~~   42 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEE-GSNVINFDIKEPS   42 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCccc
Confidence            4689999999999999998888877 8999888876543

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.36  E-value=1  Score=39.33  Aligned_cols=95  Identities=18%  Similarity=0.240  Sum_probs=65.5

Q ss_pred             ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++....+..++..+ --.|++++|.|.+..+|.-.+.++... ++.+.+.-                   ++..+..
T Consensus       138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~atVt~ch-------------------s~T~~l~  197 (284)
T PRK14177        138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEM-NATVTLCH-------------------SKTQNLP  197 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeC-------------------CCCCCHH
Confidence            34555444444555444 357999999999999999988888877 76555332                   1222344


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       198 ~~~~~ADIvIsAvGk~~~i~~~~ik~gavVIDvGin~  234 (284)
T PRK14177        198 SIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYNP  234 (284)
T ss_pred             HHHhhCCEEEEeCCCcCccCHHHcCCCCEEEEecCcc
Confidence            45567899999999763 3456788999999998644

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.35  E-value=0.7  Score=39.63  Aligned_cols=73  Identities=23%  Similarity=0.346  Sum_probs=45.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC-cccHHHHHHcCCCEE-EeCCCC-Chhhh-------ccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS-TPKVEFVKELGADKV-IDYRKT-KYEDI-------EEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~-~~~~~~~~~~g~~~v-~~~~~~-~~~~~-------~~~~d~v~  217 (327)
                      .+++++|+|++|++|.++++.+... |.++++..+. ++..+.+++.+...+ .|-.+. .....       ..++|.++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLRE-GAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999988888777 8888776643 333333333333222 122211 11111       14689999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .+.|
T Consensus        85 ~~ag   88 (255)
T PRK06463         85 NNAG   88 (255)
T ss_pred             ECCC
Confidence            9886

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=93.35  E-value=0.34  Score=42.63  Aligned_cols=71  Identities=17%  Similarity=0.219  Sum_probs=46.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHH-HHcC----CCEEEeCCCCChhhhccCccEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFV-KELG----ADKVIDYRKTKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~-~~~g----~~~v~~~~~~~~~~~~~~~d~v~d~~  220 (327)
                      ..+++++|+| +|+.|.+++..+..+ |+ ++.++.++.++.+.+ ++++    ...+...  .+.......+|++++|+
T Consensus       125 ~~~k~vlIlG-aGGaaraia~aL~~~-G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~~~~~~~~~aDiVInaT  200 (284)
T PRK12549        125 ASLERVVQLG-AGGAGAAVAHALLTL-GVERLTIFDVDPARAAALADELNARFPAARATAG--SDLAAALAAADGLVHAT  200 (284)
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--cchHhhhCCCCEEEECC
Confidence            3568899999 899999999988888 77 455555776655433 4442    1122221  12233456799999995


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      .
T Consensus       201 p  201 (284)
T PRK12549        201 P  201 (284)
T ss_pred             c
Confidence            3

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=93.34  E-value=0.5  Score=40.41  Aligned_cols=70  Identities=17%  Similarity=0.330  Sum_probs=46.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEE-EeCCCCChh---hh-------ccCccEEEe
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKV-IDYRKTKYE---DI-------EEKFDVLYD  218 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~---~~-------~~~~d~v~d  218 (327)
                      +++|+|++|.+|.+.+..+... |.+++++.+++++.+.+. .++.... +..+-.+..   +.       ..++|.++.
T Consensus         2 ~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            6899999999999998888877 999998888877655443 3443221 211111111   11       136899998


Q ss_pred             CCC
Q 020320          219 TIG  221 (327)
Q Consensus       219 ~~g  221 (327)
                      ++|
T Consensus        81 ~ag   83 (248)
T PRK10538         81 NAG   83 (248)
T ss_pred             CCC
Confidence            876

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.33  E-value=1  Score=39.38  Aligned_cols=95  Identities=21%  Similarity=0.285  Sum_probs=66.3

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++....+..++..++ -.|++++|.|.+..+|.-.+.++... ++.+.+.-.                   +..+..
T Consensus       137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~-~atVt~chs-------------------~t~~l~  196 (284)
T PRK14190        137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNE-NATVTYCHS-------------------KTKNLA  196 (284)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEEeC-------------------CchhHH
Confidence            346555445555565554 57999999999999999998888877 776654321                   112334


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       197 ~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~  233 (284)
T PRK14190        197 ELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNR  233 (284)
T ss_pred             HHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccc
Confidence            45567899999999663 3345678999999998765

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=93.33  E-value=0.58  Score=40.18  Aligned_cols=73  Identities=21%  Similarity=0.282  Sum_probs=45.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc--cHHHHHHcCCCE-EEeCCCCChh---hh-------ccCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP--KVEFVKELGADK-VIDYRKTKYE---DI-------EEKFD  214 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~--~~~~~~~~g~~~-v~~~~~~~~~---~~-------~~~~d  214 (327)
                      .+++++|+|++|++|.++++.+... |++++....++.  ..+.+++.+... .+..+-.+..   ..       ..++|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEA-GCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999998888877 998887654332  122233344221 1211112211   11       14689


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus        88 ~li~~Ag   94 (253)
T PRK08993         88 ILVNNAG   94 (253)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06484 short chain dehydrogenase; Validated

Probab=93.32  E-value=0.51  Score=45.29  Aligned_cols=74  Identities=22%  Similarity=0.382  Sum_probs=50.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-E--eCCCC-Chhhh-------ccCcc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-I--DYRKT-KYEDI-------EEKFD  214 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~--~~~~~-~~~~~-------~~~~d  214 (327)
                      ..++++||+||++++|.+.++.+... |.+++++.+++++.+.+ ++++.... +  |-.+. .....       ...+|
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAA-GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            35789999999999999988877777 89999888877766544 34553321 2  22221 11111       14689


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      +++.++|
T Consensus       346 ~li~nAg  352 (520)
T PRK06484        346 VLVNNAG  352 (520)
T ss_pred             EEEECCC
Confidence            9999877

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.30  E-value=0.2  Score=42.77  Aligned_cols=42  Identities=24%  Similarity=0.348  Sum_probs=34.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+.+++|+||+|.+|..++..+... |.+++++.+++++.+.+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~-G~~V~~~~r~~~~~~~~   45 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAE-GARVVVTDRNEEAAERV   45 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4578999999999999988888777 89988888887765444

>PRK08278 short chain dehydrogenase; Provisional

Probab=93.27  E-value=0.66  Score=40.40  Aligned_cols=37  Identities=32%  Similarity=0.563  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .+++++|+||+|.+|...+..+... |++++++.++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARD-GANIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecccc
Confidence            4679999999999999988877777 899888887543

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.24  E-value=1.1  Score=39.08  Aligned_cols=95  Identities=16%  Similarity=0.204  Sum_probs=66.0

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++....+..++..++ -.|++++|.|.+..+|.=.+.++... ++.+.+.-                   ++..+..
T Consensus       135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~atVtich-------------------s~T~~l~  194 (282)
T PRK14169        135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNH-DATVTIAH-------------------SKTRNLK  194 (282)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEEC-------------------CCCCCHH
Confidence            345555445555555443 57899999999999999888888877 76554331                   1222344


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       195 ~~~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvGin~  231 (282)
T PRK14169        195 QLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISR  231 (282)
T ss_pred             HHHhhCCEEEEccCCcCccCHHHcCCCcEEEEeeccc
Confidence            45567899999999763 3446788999999998755

>PRK07806 short chain dehydrogenase; Provisional

Probab=93.23  E-value=0.72  Score=39.30  Aligned_cols=36  Identities=25%  Similarity=0.415  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .+++++|+|++|.+|...+..+... |.++++..++.
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~-G~~V~~~~r~~   40 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQK   40 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCc
Confidence            4678999999999999998888877 88888877754

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=93.22  E-value=0.42  Score=42.61  Aligned_cols=73  Identities=12%  Similarity=0.320  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH---c-CC--C-EEE--eCC-CCChhhhccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE---L-GA--D-KVI--DYR-KTKYEDIEEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~---~-g~--~-~v~--~~~-~~~~~~~~~~~d~v~  217 (327)
                      .+.+|||+||+|-+|..++..+... |.++++++++.++......   + +.  . ..+  |-. ...+.....++|.||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQR-GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHC-CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence            3578999999999999988888887 8888888876554322211   1 11  1 112  111 123444457899999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .+++
T Consensus        82 h~A~   85 (322)
T PLN02662         82 HTAS   85 (322)
T ss_pred             EeCC
Confidence            8876

>PRK07074 short chain dehydrogenase; Provisional

Probab=93.20  E-value=0.67  Score=39.76  Aligned_cols=72  Identities=19%  Similarity=0.283  Sum_probs=46.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE--EEeCCCCChhh---hc-------cCccE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK--VIDYRKTKYED---IE-------EKFDV  215 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~--v~~~~~~~~~~---~~-------~~~d~  215 (327)
                      +++++|+|++|.+|...+..+... |.+++++.+++++.+.+ +++....  .+..+-.+...   ..       +++|.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAA-GDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999988887777 88988888876655433 3332111  12111112111   11       35899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++.+.|
T Consensus        81 vi~~ag   86 (257)
T PRK07074         81 LVANAG   86 (257)
T ss_pred             EEECCC
Confidence            999887

>PLN02427 UDP-apiose/xylose synthase

Probab=93.20  E-value=0.33  Score=44.68  Aligned_cols=78  Identities=12%  Similarity=0.097  Sum_probs=48.6

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC-------CCEEE-eCCC-CChhhhccCcc
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG-------ADKVI-DYRK-TKYEDIEEKFD  214 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g-------~~~v~-~~~~-~~~~~~~~~~d  214 (327)
                      ++..+..+|||+||+|-+|..++..+...++.++++++++.++...+...+       .+.+. |-.+ ..+....+++|
T Consensus         9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d   88 (386)
T PLN02427          9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD   88 (386)
T ss_pred             CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence            334455689999999999998888777663477887777655544333222       11111 1111 22333456799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      +||.+++
T Consensus        89 ~ViHlAa   95 (386)
T PLN02427         89 LTINLAA   95 (386)
T ss_pred             EEEEccc
Confidence            9999886

>PRK06953 short chain dehydrogenase; Provisional

Probab=93.19  E-value=0.47  Score=39.80  Aligned_cols=71  Identities=20%  Similarity=0.362  Sum_probs=47.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCCC-hhhh---c--cCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKTK-YEDI---E--EKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~~-~~~~---~--~~~d~v~d~~g  221 (327)
                      ++++|+|++|.+|..+++.+... |++++.+.++++..+.+...+...+ .|-.+.. ....   .  .++|.++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRAD-GWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhC-CCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence            47899999999999988877666 8998888887776665555554322 2222211 1111   1  25899998876

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=93.19  E-value=0.31  Score=35.65  Aligned_cols=83  Identities=22%  Similarity=0.402  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---h
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---K  224 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~  224 (327)
                      .|.+|||.| .|.+|..-++.+... |+++.++....   ...+  +.   +......+...+.++++|+.+.+..   .
T Consensus         6 ~~~~vlVvG-gG~va~~k~~~Ll~~-gA~v~vis~~~---~~~~--~~---i~~~~~~~~~~l~~~~lV~~at~d~~~n~   75 (103)
T PF13241_consen    6 KGKRVLVVG-GGPVAARKARLLLEA-GAKVTVISPEI---EFSE--GL---IQLIRREFEEDLDGADLVFAATDDPELNE   75 (103)
T ss_dssp             TT-EEEEEE-ESHHHHHHHHHHCCC-TBEEEEEESSE---HHHH--TS---CEEEESS-GGGCTTESEEEE-SS-HHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCch---hhhh--hH---HHHHhhhHHHHHhhheEEEecCCCHHHHH
Confidence            578999999 799999988888887 88888887765   2222  21   1112223445567899999998854   3


Q ss_pred             hhhhhhcCCCcEEEee
Q 020320          225 NSFVVAKDNAPIVDIT  240 (327)
Q Consensus       225 ~~~~~l~~~g~~v~~g  240 (327)
                      ......+..|..+...
T Consensus        76 ~i~~~a~~~~i~vn~~   91 (103)
T PF13241_consen   76 AIYADARARGILVNVV   91 (103)
T ss_dssp             HHHHHHHHTTSEEEET
T ss_pred             HHHHHHhhCCEEEEEC
Confidence            3444445566666654

>PRK06138 short chain dehydrogenase; Provisional

Probab=93.18  E-value=0.52  Score=40.22  Aligned_cols=73  Identities=25%  Similarity=0.339  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc--CCC-EEEeCCCCChhh---h-------ccCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL--GAD-KVIDYRKTKYED---I-------EEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~--g~~-~v~~~~~~~~~~---~-------~~~~  213 (327)
                      .+++++|+|++|.+|...+..+... |.+++.+.++.++.... .++  +.. ..+..+-.+...   .       ..++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHC-CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999988877777 88888888776654332 222  221 122111122111   1       1478


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |.++.+.|
T Consensus        83 d~vi~~ag   90 (252)
T PRK06138         83 DVLVNNAG   90 (252)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.11  E-value=1.2  Score=38.79  Aligned_cols=95  Identities=22%  Similarity=0.302  Sum_probs=65.8

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..+. -.|++++|.|.+..+|.-...++... ++.+.+.-.                   +..+..
T Consensus       137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~-~AtVt~chs-------------------~T~~l~  196 (278)
T PRK14172        137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNE-NATVTICHS-------------------KTKNLK  196 (278)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeCC-------------------CCCCHH
Confidence            345555445555565554 57999999999999999988888876 765543321                   222334


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       197 ~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~  233 (278)
T PRK14172        197 EVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSS  233 (278)
T ss_pred             HHHhhCCEEEEcCCCcCccCHHHcCCCcEEEEeeccc
Confidence            44567899999999763 3346688999999998655

>PLN02686 cinnamoyl-CoA reductase

Probab=93.11  E-value=0.27  Score=44.98  Aligned_cols=43  Identities=16%  Similarity=0.251  Sum_probs=34.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      ..+++|||+||+|.+|..++..+... |.+++++.++.++...+
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~-G~~V~~~~r~~~~~~~l   93 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRH-GYSVRIAVDTQEDKEKL   93 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            45789999999999999999888877 88888877765544333

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.07  E-value=1.2  Score=38.87  Aligned_cols=95  Identities=19%  Similarity=0.188  Sum_probs=65.5

Q ss_pred             ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..+ .-.|++++|.|.+..+|.=.+.++... ++.+.+.-.                   +..+..
T Consensus       137 ~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~-~ATVt~chs-------------------~T~dl~  196 (282)
T PRK14180        137 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-KATVTTCHR-------------------FTTDLK  196 (282)
T ss_pred             cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEEcC-------------------CCCCHH
Confidence            44655545555565544 346999999999999999988888877 775543321                   122334


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..++++..++.+|...
T Consensus       197 ~~~k~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~  233 (282)
T PRK14180        197 SHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINH  233 (282)
T ss_pred             HHhhhcCEEEEccCCcCcCCHHHcCCCcEEEEecccc
Confidence            44567899999999763 3346788898999998654

>PRK12743 oxidoreductase; Provisional

Probab=93.07  E-value=0.71  Score=39.66  Aligned_cols=33  Identities=15%  Similarity=0.209  Sum_probs=28.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT  182 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~  182 (327)
                      +++++|+||++.+|..+++.+... |.++++..+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~-G~~V~~~~~   34 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQ-GFDIGITWH   34 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeC
Confidence            468999999999999998888887 998887764

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.07  E-value=1.1  Score=39.05  Aligned_cols=95  Identities=23%  Similarity=0.252  Sum_probs=65.8

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++....+..++..+. -.|++++|.|.+..+|.=...++... ++.+.+.-                   ++..+..
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~-~atVtich-------------------s~T~~l~  195 (284)
T PRK14170        136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE-NATVTIAH-------------------SRTKDLP  195 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeC-------------------CCCCCHH
Confidence            346555445555555554 46999999999999999888888876 76554331                   1222344


Q ss_pred             hhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~~  243 (327)
                      +..+.+|+++-++|.... .-..+++|..++.+|...
T Consensus       196 ~~~~~ADIvI~AvG~~~~i~~~~vk~GavVIDvGin~  232 (284)
T PRK14170        196 QVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDR  232 (284)
T ss_pred             HHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcc
Confidence            455678999999997643 346788999999998654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=93.06  E-value=0.21  Score=45.98  Aligned_cols=87  Identities=22%  Similarity=0.305  Sum_probs=54.1

Q ss_pred             EEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHH--cCC--CE-EEeCCC-CChhhhccCccEEEeCCCCc-
Q 020320          152 IFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKE--LGA--DK-VIDYRK-TKYEDIEEKFDVLYDTIGDC-  223 (327)
Q Consensus       152 vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~--~g~--~~-v~~~~~-~~~~~~~~~~d~v~d~~g~~-  223 (327)
                      |+|+|+ |.+|..++..+...... +++++.++.++.+.+.+  .+.  .. .+|..+ ....+.+++.|+|++|+|.. 
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~   79 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF   79 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence            789997 99999999998887344 77888899888666543  222  11 223222 22344567899999999854 


Q ss_pred             --hhhhhhhcCCCcEEEe
Q 020320          224 --KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 --~~~~~~l~~~g~~v~~  239 (327)
                        .-+-.|++.+-.++..
T Consensus        80 ~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   80 GEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             HHHHHHHHHHHT-EEEES
T ss_pred             hHHHHHHHHHhCCCeecc
Confidence              2334566667677763

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK07791 short chain dehydrogenase; Provisional

Probab=93.05  E-value=0.8  Score=40.22  Aligned_cols=37  Identities=24%  Similarity=0.383  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      -.+++++|+||++++|.+.++.+... |+++++..++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~-G~~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIGV   40 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeeCCc
Confidence            46789999999999999988877777 89888877543

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=93.01  E-value=1.5  Score=36.50  Aligned_cols=97  Identities=16%  Similarity=0.097  Sum_probs=60.5

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHH----HcCCC---EEEeCCCCChhhhccC
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVK----ELGAD---KVIDYRKTKYEDIEEK  212 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~~~~~  212 (327)
                      ++...++++++||=.| || .|..+..+++..+ +.+++.++.+++..+.++    ..+..   .++..+..........
T Consensus        65 ~~~l~~~~~~~VLDiG-~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~~~  142 (205)
T PRK13944         65 CELIEPRPGMKILEVG-TG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKHAP  142 (205)
T ss_pred             HHhcCCCCCCEEEEEC-cC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccCCC
Confidence            4556788999999998 44 4667777777652 246777788877665554    34432   2222222111112246


Q ss_pred             ccEEEeCCC--Cc-hhhhhhhcCCCcEEEe
Q 020320          213 FDVLYDTIG--DC-KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       213 ~d~v~d~~g--~~-~~~~~~l~~~g~~v~~  239 (327)
                      +|.++-+..  .. ....+.|+++|+++..
T Consensus       143 fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        143 FDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             ccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence            899885543  22 5667889999998764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=92.99  E-value=0.74  Score=39.51  Aligned_cols=40  Identities=25%  Similarity=0.378  Sum_probs=33.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      .+++++|+|+++.+|..++..+... |++++++.+++++.+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~-G~~vv~~~r~~~~~~   49 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAAN   49 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHH
Confidence            4789999999999999988888877 999888887666543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=92.98  E-value=0.17  Score=45.07  Aligned_cols=70  Identities=20%  Similarity=0.295  Sum_probs=47.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      +++|+|++|.+|...++.+... |.+++++.+++++.....+.+...+. |..+ ....+...++|.++++++
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~   73 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQ-GEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA   73 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHC-CCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence            6899999999999998888877 88888888876654333333433322 2222 223334567899998875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=92.98  E-value=2.6  Score=38.92  Aligned_cols=96  Identities=23%  Similarity=0.313  Sum_probs=61.0

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCccc-HHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      .+--.+.++||+| +|-+|..++..+... |...+.+. ++.+| .++++++|+..+- .  ++....+..+|+||.+++
T Consensus       173 ~~~L~~~~vlvIG-AGem~~lva~~L~~~-g~~~i~IaNRT~erA~~La~~~~~~~~~-l--~el~~~l~~~DvVissTs  247 (414)
T COG0373         173 FGSLKDKKVLVIG-AGEMGELVAKHLAEK-GVKKITIANRTLERAEELAKKLGAEAVA-L--EELLEALAEADVVISSTS  247 (414)
T ss_pred             hcccccCeEEEEc-ccHHHHHHHHHHHhC-CCCEEEEEcCCHHHHHHHHHHhCCeeec-H--HHHHHhhhhCCEEEEecC
Confidence            3334678999999 788888777777776 76666666 66664 4667889965431 1  123334568999999998


Q ss_pred             Cch------hhhhhhcCCCc--EEEeeCCCC
Q 020320          222 DCK------NSFVVAKDNAP--IVDITWPPS  244 (327)
Q Consensus       222 ~~~------~~~~~l~~~g~--~v~~g~~~~  244 (327)
                      +++      .....++..-+  +++++.|..
T Consensus       248 a~~~ii~~~~ve~a~~~r~~~livDiavPRd  278 (414)
T COG0373         248 APHPIITREMVERALKIRKRLLIVDIAVPRD  278 (414)
T ss_pred             CCccccCHHHHHHHHhcccCeEEEEecCCCC
Confidence            652      22234443333  556666653

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=92.92  E-value=0.26  Score=45.18  Aligned_cols=74  Identities=12%  Similarity=0.122  Sum_probs=46.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      ..+++|||+|++|-+|..++..+... |.+++++++..........++...+. |-.+ ..+.....++|.||.+++
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~-G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa   94 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAE-GHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhC-CCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence            46789999999999999999999888 88888887643221100111222221 2111 112223457899999874

>PRK07576 short chain dehydrogenase; Provisional

Probab=92.91  E-value=0.25  Score=42.85  Aligned_cols=40  Identities=33%  Similarity=0.526  Sum_probs=33.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      ++++++|+||+|.+|..+++.+... |.+++++.+++++.+
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~   47 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARA-GANVAVASRSQEKVD   47 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence            5789999999999999998888877 999888888766543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.91  E-value=0.79  Score=39.53  Aligned_cols=35  Identities=20%  Similarity=0.248  Sum_probs=28.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .+++++|+||+  +++|.++++.+... |.+++++.++
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~-G~~v~~~~r~   42 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNA-GAKLVFTYAG   42 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEecCc
Confidence            47899999986  79999988777777 8988877654

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=92.90  E-value=0.58  Score=46.54  Aligned_cols=41  Identities=29%  Similarity=0.418  Sum_probs=34.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      .++++||+|++|.+|.+++..+... |++++++.++.++.+.
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~-Ga~Vvi~~r~~~~~~~  453 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEA  453 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCHHHHHH
Confidence            4789999999999999988888777 9999988887665443

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=92.87  E-value=0.73  Score=39.05  Aligned_cols=73  Identities=25%  Similarity=0.411  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EEeCCCCChhh----------hccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VIDYRKTKYED----------IEEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~----------~~~~~d~  215 (327)
                      .+.+++|+|++|.+|..++..+... |..++...++.++.+.. .+++... .+..+-.+...          ...++|.
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQ-GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4679999999999999988887777 88776666665554433 3444322 22111111111          1246899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++.+.|
T Consensus        84 vi~~ag   89 (245)
T PRK12936         84 LVNNAG   89 (245)
T ss_pred             EEECCC
Confidence            999887

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=92.85  E-value=0.41  Score=42.71  Aligned_cols=101  Identities=20%  Similarity=0.257  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|..++.+++.+ |.++++..+.....    +.+..      ..++.+.+...|+++-++...    
T Consensus       144 ~gktvGIiG-~G~IG~~vA~~~~~f-gm~V~~~d~~~~~~----~~~~~------~~~l~ell~~sDvv~lh~Plt~~T~  211 (311)
T PRK08410        144 KGKKWGIIG-LGTIGKRVAKIAQAF-GAKVVYYSTSGKNK----NEEYE------RVSLEELLKTSDIISIHAPLNEKTK  211 (311)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhc-CCEEEEECCCcccc----ccCce------eecHHHHhhcCCEEEEeCCCCchhh
Confidence            588999999 999999999999997 99999887653211    11211      123555667789998776521    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..|+++..++.++-...          ++   -+.+++.+++|++.
T Consensus       212 ~li~~~~~~~Mk~~a~lIN~aRG~v----------VD---e~AL~~AL~~g~i~  252 (311)
T PRK08410        212 NLIAYKELKLLKDGAILINVGRGGI----------VN---EKDLAKALDEKDIY  252 (311)
T ss_pred             cccCHHHHHhCCCCeEEEECCCccc----------cC---HHHHHHHHHcCCeE
Confidence                556788999998888863331          12   24567778888876

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=92.85  E-value=0.25  Score=42.44  Aligned_cols=40  Identities=20%  Similarity=0.393  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      .++++||+|++|.+|.++++.+... |.++++..+++++.+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~-G~~V~~~~r~~~~~~   48 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQA-GAEVILNGRDPAKLA   48 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHH
Confidence            5789999999999999998888777 899888887766543

>PRK07063 short chain dehydrogenase; Provisional

Probab=92.84  E-value=0.25  Score=42.51  Aligned_cols=42  Identities=21%  Similarity=0.357  Sum_probs=34.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+++++|+|+++++|.+++..+... |++++++.+++++.+.+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~-G~~vv~~~r~~~~~~~~   47 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFARE-GAAVALADLDAALAERA   47 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988888877 99998888876655433

>PRK07775 short chain dehydrogenase; Provisional

Probab=92.83  E-value=0.76  Score=40.01  Aligned_cols=72  Identities=17%  Similarity=0.267  Sum_probs=46.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-EeCCCCChhhh----------ccCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-IDYRKTKYEDI----------EEKF  213 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~----------~~~~  213 (327)
                      .++++|+||+|.+|.+.+..+... |.+++++.++.++...+    +..+.... +..+-.+..+.          ..++
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAA-GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            468999999999999998888777 88888888766554332    22343321 12222222211          2368


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |.+|.++|
T Consensus        89 d~vi~~Ag   96 (274)
T PRK07775         89 EVLVSGAG   96 (274)
T ss_pred             CEEEECCC
Confidence            99998887

>PRK08703 short chain dehydrogenase; Provisional

Probab=92.82  E-value=0.27  Score=41.78  Aligned_cols=42  Identities=26%  Similarity=0.431  Sum_probs=34.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+++++|+|++|.+|...++.+... |.+++++.+++++.+.+
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~-g~~V~~~~r~~~~~~~~   46 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAA-GATVILVARHQKKLEKV   46 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCChHHHHHH
Confidence            4679999999999999988888877 89988888887765433

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=92.82  E-value=0.75  Score=40.44  Aligned_cols=73  Identities=22%  Similarity=0.279  Sum_probs=44.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHH-HHcC----CCEEEeCCCCChhhhccCccEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFV-KELG----ADKVIDYRKTKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~-~~~g----~~~v~~~~~~~~~~~~~~~d~v~d~~  220 (327)
                      ..+++++|+| +|+.+.+++..+..+ |++ +.++.++.+|.+.+ +++.    ...+..............+|++++++
T Consensus       125 ~~~k~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaT  202 (283)
T PRK14027        125 AKLDSVVQVG-AGGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT  202 (283)
T ss_pred             cCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcC
Confidence            3478999999 799999988888777 765 44555776664443 3332    21121111011122345689999987


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      .
T Consensus       203 p  203 (283)
T PRK14027        203 P  203 (283)
T ss_pred             C
Confidence            5

>PRK07062 short chain dehydrogenase; Provisional

Probab=92.80  E-value=0.27  Score=42.51  Aligned_cols=41  Identities=22%  Similarity=0.454  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      .+++++|+||++++|.+.++.+... |++++++.+++++.+.
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~   47 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEA-GASVAICGRDEERLAS   47 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHH
Confidence            4789999999999999988888877 9999988888776543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=92.78  E-value=0.71  Score=42.66  Aligned_cols=78  Identities=22%  Similarity=0.320  Sum_probs=49.9

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH-------HHHHc-CCCEEE-eCCC-CChhhhcc-
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE-------FVKEL-GADKVI-DYRK-TKYEDIEE-  211 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~-------~~~~~-g~~~v~-~~~~-~~~~~~~~-  211 (327)
                      +.+...+.+|+|+||+|.+|..++..+... |.++++++++..+..       ..... +.+.+. |..+ +.+..... 
T Consensus        54 ~~~~~~~~kVLVtGatG~IG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~  132 (390)
T PLN02657         54 RSKEPKDVTVLVVGATGYIGKFVVRELVRR-GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFS  132 (390)
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHH
Confidence            344566789999999999999998888877 899988887654321       11122 233222 2222 22222233 


Q ss_pred             ---CccEEEeCCC
Q 020320          212 ---KFDVLYDTIG  221 (327)
Q Consensus       212 ---~~d~v~d~~g  221 (327)
                         ++|+|++|++
T Consensus       133 ~~~~~D~Vi~~aa  145 (390)
T PLN02657        133 EGDPVDVVVSCLA  145 (390)
T ss_pred             hCCCCcEEEECCc
Confidence               6999999876

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=92.78  E-value=0.82  Score=39.44  Aligned_cols=95  Identities=18%  Similarity=0.186  Sum_probs=63.9

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCC
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~  220 (327)
                      +......++.+||=+| ||. |..+..+++...+.+++.++.++...+.+++.+.+.+.. +-..+. ....+|+|+...
T Consensus        22 l~~l~~~~~~~vLDlG-cG~-G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~~~-d~~~~~-~~~~fD~v~~~~   97 (255)
T PRK14103         22 LARVGAERARRVVDLG-CGP-GNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDARTG-DVRDWK-PKPDTDVVVSNA   97 (255)
T ss_pred             HHhCCCCCCCEEEEEc-CCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEEEc-ChhhCC-CCCCceEEEEeh
Confidence            4556677889999888 665 667778887654678888889988888887766554332 111111 124689998644


Q ss_pred             C-----C----chhhhhhhcCCCcEEEe
Q 020320          221 G-----D----CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       221 g-----~----~~~~~~~l~~~g~~v~~  239 (327)
                      .     .    ...+.+.|+|+|.++..
T Consensus        98 ~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         98 ALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             hhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            3     1    14566789999998764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.76  E-value=0.69  Score=39.97  Aligned_cols=73  Identities=23%  Similarity=0.362  Sum_probs=43.4

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHhhcCCcEEEEeCC---cccHH-HHHHcCCCEEE--eCCCC-Chhh-------hcc
Q 020320          148 TGQTIFIVGG--AGGVGTLVIQLAKHFYGASHVVATTS---TPKVE-FVKELGADKVI--DYRKT-KYED-------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga--~g~~G~~a~~la~~~~g~~~v~~~~~---~~~~~-~~~~~g~~~v~--~~~~~-~~~~-------~~~  211 (327)
                      .+++++|+||  ++++|.+++..+... |+++++..+.   +++.+ +.++++....+  |-.+. ....       ..+
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHC-CCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            4789999996  579999987777766 8988876532   22222 22344532222  22111 1111       124


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|+++++.|
T Consensus        84 ~iD~lvnnAG   93 (260)
T PRK06997         84 GLDGLVHSIG   93 (260)
T ss_pred             CCcEEEEccc
Confidence            6899998876

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.72  E-value=1.4  Score=38.77  Aligned_cols=95  Identities=17%  Similarity=0.181  Sum_probs=65.3

Q ss_pred             ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++....+..++..+ --.|++++|.|.+..+|.=...++... ++.+.+.-.                   +..+..
T Consensus       139 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~aTVt~chs-------------------~T~~l~  198 (294)
T PRK14187        139 LIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGE-NCTVTTVHS-------------------ATRDLA  198 (294)
T ss_pred             ccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhC-CCEEEEeCC-------------------CCCCHH
Confidence            34555544555565544 357999999999999999888888876 665553222                   122334


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..++++..++.+|...
T Consensus       199 ~~~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVGin~  235 (294)
T PRK14187        199 DYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINS  235 (294)
T ss_pred             HHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccc
Confidence            44567899999999763 3446778898999998654

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.72  E-value=1.4  Score=38.58  Aligned_cols=95  Identities=18%  Similarity=0.207  Sum_probs=65.1

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..++ -.|++++|.|.+..+|.=...++... ++.+.+.- +                  +..+..
T Consensus       138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~-~ATVtich-s------------------~T~~L~  197 (288)
T PRK14171        138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKE-NCSVTICH-S------------------KTHNLS  197 (288)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeC-C------------------CCCCHH
Confidence            345554445555555443 57899999999999999888888876 76554221 1                  222344


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       198 ~~~~~ADIvV~AvGkp~~i~~~~vk~GavVIDvGin~  234 (288)
T PRK14171        198 SITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINR  234 (288)
T ss_pred             HHHhhCCEEEEccCCCCccCHHHcCCCCEEEEeeccc
Confidence            45567899999999764 3347788999999998654

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=92.69  E-value=2.1  Score=35.90  Aligned_cols=97  Identities=22%  Similarity=0.175  Sum_probs=60.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHH----HcCCCEE--EeCCCCChhhhcc
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVK----ELGADKV--IDYRKTKYEDIEE  211 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~  211 (327)
                      .++...++++++||=.| +| .|..+..+++.. +.  +++.++.+++..+.++    +.|.+.+  +..+.........
T Consensus        69 ~~~~l~~~~~~~VLDiG-~G-sG~~a~~la~~~-~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~  145 (215)
T TIGR00080        69 MTELLELKPGMKVLEIG-TG-SGYQAAVLAEIV-GRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLA  145 (215)
T ss_pred             HHHHhCCCCcCEEEEEC-CC-ccHHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccC
Confidence            44556788999999998 44 466666777765 43  4777778877666553    3554332  2222111111224


Q ss_pred             CccEEEeCCC--C-chhhhhhhcCCCcEEEe
Q 020320          212 KFDVLYDTIG--D-CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       212 ~~d~v~d~~g--~-~~~~~~~l~~~g~~v~~  239 (327)
                      .+|+++-...  . .....+.|+++|+++..
T Consensus       146 ~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       146 PYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             CCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            6998884432  2 25677899999998765

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=92.69  E-value=1.6  Score=38.53  Aligned_cols=95  Identities=22%  Similarity=0.228  Sum_probs=65.5

Q ss_pred             ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++....+..++..+ --.|++++|.|.+..+|.=...++... ++.+.+.-.                   +..+..
T Consensus       146 ~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~-~ATVtvchs-------------------~T~nl~  205 (299)
T PLN02516        146 FLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKA-DATVTVVHS-------------------RTPDPE  205 (299)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeCC-------------------CCCCHH
Confidence            45666555555565544 346999999999999999888888877 765554321                   112234


Q ss_pred             hhccCccEEEeCCCCc-hhhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDC-KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~-~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|.. .-.-..+++|..++.+|...
T Consensus       206 ~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~  242 (299)
T PLN02516        206 SIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNA  242 (299)
T ss_pred             HHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccc
Confidence            4456789999999965 33456789999999998654

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.67  E-value=1.5  Score=38.61  Aligned_cols=95  Identities=17%  Similarity=0.168  Sum_probs=64.8

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..++ -.|++++|.|.+..+|.=...++... ++.+.+.-                   ++..+..
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~-~atVtv~h-------------------s~T~~l~  196 (297)
T PRK14186        137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAA-NATVTIAH-------------------SRTQDLA  196 (297)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeC-------------------CCCCCHH
Confidence            345554444555555554 47899999999999999988888877 77554332                   1122333


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       197 ~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~  233 (297)
T PRK14186        197 SITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHR  233 (297)
T ss_pred             HHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccc
Confidence            44567899999999663 3346788888888998654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=92.67  E-value=0.42  Score=37.89  Aligned_cols=33  Identities=27%  Similarity=0.504  Sum_probs=25.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEE-EEeCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHV-VATTS  183 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v-~~~~~  183 (327)
                      ++++|+||++++|.+.++.+... |.+++ .+.++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~-g~~~v~~~~r~   34 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARR-GARVVILTSRS   34 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHT-TTEEEEEEESS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhc-CceEEEEeeec
Confidence            47899999999999988777777 66554 44566

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.66  E-value=1.5  Score=38.35  Aligned_cols=95  Identities=17%  Similarity=0.193  Sum_probs=65.8

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++....+..++..+. -.|++++|.|.+..+|.=.+.++... ++.+.+.-.                   +..+..
T Consensus       136 ~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~-~atVt~chs-------------------~T~nl~  195 (282)
T PRK14166        136 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-GATVSVCHI-------------------KTKDLS  195 (282)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCC-------------------CCCCHH
Confidence            446665555555665543 57999999999999999888888876 665542221                   122334


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       196 ~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvGin~  232 (282)
T PRK14166        196 LYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINR  232 (282)
T ss_pred             HHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEecccc
Confidence            44567899999999763 3446788999999998654

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=92.59  E-value=0.98  Score=40.23  Aligned_cols=84  Identities=18%  Similarity=0.192  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---  223 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  223 (327)
                      -.|++|.|+| .|.+|.+.++.++.. |.++++..+.....+.++..|.. +.     +..+.....|+++-++...   
T Consensus        14 LkgKtVGIIG-~GsIG~amA~nL~d~-G~~ViV~~r~~~s~~~A~~~G~~-v~-----sl~Eaak~ADVV~llLPd~~t~   85 (335)
T PRK13403         14 LQGKTVAVIG-YGSQGHAQAQNLRDS-GVEVVVGVRPGKSFEVAKADGFE-VM-----SVSEAVRTAQVVQMLLPDEQQA   85 (335)
T ss_pred             hCcCEEEEEe-EcHHHHHHHHHHHHC-cCEEEEEECcchhhHHHHHcCCE-EC-----CHHHHHhcCCEEEEeCCChHHH
Confidence            4678999999 999999999999988 99998887665555566666753 21     3556667889998777531   


Q ss_pred             ----hhhhhhhcCCCcEEE
Q 020320          224 ----KNSFVVAKDNAPIVD  238 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~  238 (327)
                          ...+..|+++..++.
T Consensus        86 ~V~~~eil~~MK~GaiL~f  104 (335)
T PRK13403         86 HVYKAEVEENLREGQMLLF  104 (335)
T ss_pred             HHHHHHHHhcCCCCCEEEE
Confidence                234556677665443

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=92.50  E-value=0.87  Score=37.35  Aligned_cols=92  Identities=24%  Similarity=0.364  Sum_probs=56.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEE--EeCCCCChhhhccCccEEEeC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKV--IDYRKTKYEDIEEKFDVLYDT  219 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~~~d~v~d~  219 (327)
                      +.++.+||-.| || .|..+..+++...+.+++.++.+++..+.++    +.+.+.+  +..+..++.. ...+|+++..
T Consensus        43 l~~g~~VLDiG-cG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~  119 (187)
T PRK00107         43 LPGGERVLDVG-SG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSR  119 (187)
T ss_pred             cCCCCeEEEEc-CC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEc
Confidence            44588999888 44 3555556665544678888888888766654    4554432  2222122222 3469999854


Q ss_pred             C-CCc----hhhhhhhcCCCcEEEee
Q 020320          220 I-GDC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       220 ~-g~~----~~~~~~l~~~g~~v~~g  240 (327)
                      . +..    ..+.+.|+++|+++.+-
T Consensus       120 ~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        120 AVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             cccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            3 332    45678999999988773

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.49  E-value=1.5  Score=38.63  Aligned_cols=94  Identities=16%  Similarity=0.173  Sum_probs=63.8

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHHHHcCCCEEEeCCCCCh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKY  206 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~~~~g~~~v~~~~~~~~  206 (327)
                      ++|++....+..++..+. -.|++|+|+|.++.+|.-.+.++... |+.+.+.- ++.                    +.
T Consensus       137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~-g~tVtv~~~rT~--------------------~l  195 (296)
T PRK14188        137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAA-NATVTIAHSRTR--------------------DL  195 (296)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhC-CCEEEEECCCCC--------------------CH
Confidence            446655445555555443 57999999999999999888888776 77776652 332                    12


Q ss_pred             hhhccCccEEEeCCCCchhhh-hhhcCCCcEEEeeCCC
Q 020320          207 EDIEEKFDVLYDTIGDCKNSF-VVAKDNAPIVDITWPP  243 (327)
Q Consensus       207 ~~~~~~~d~v~d~~g~~~~~~-~~l~~~g~~v~~g~~~  243 (327)
                      .+..+.+|+++-++|..+..- ..+++|..++.+|...
T Consensus       196 ~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~  233 (296)
T PRK14188        196 PAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINR  233 (296)
T ss_pred             HHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcc
Confidence            334456888898888653222 3378888999998654

>PLN02214 cinnamoyl-CoA reductase

Probab=92.47  E-value=0.55  Score=42.48  Aligned_cols=73  Identities=14%  Similarity=0.269  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH--HHHHHcC---CC-EEE--eCCC-CChhhhccCccEEEe
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV--EFVKELG---AD-KVI--DYRK-TKYEDIEEKFDVLYD  218 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~--~~~~~~g---~~-~v~--~~~~-~~~~~~~~~~d~v~d  218 (327)
                      .+++|+|+||+|-+|...+..+... |.+++++.++.++.  .....+.   .. ..+  |-.+ ..+...+.++|.||.
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLER-GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            5678999999999999988888777 88888888765532  1122221   11 112  2111 223344578999999


Q ss_pred             CCC
Q 020320          219 TIG  221 (327)
Q Consensus       219 ~~g  221 (327)
                      +++
T Consensus        88 ~A~   90 (342)
T PLN02214         88 TAS   90 (342)
T ss_pred             ecC
Confidence            987

>PRK07035 short chain dehydrogenase; Provisional

Probab=92.47  E-value=0.31  Score=41.76  Aligned_cols=41  Identities=22%  Similarity=0.435  Sum_probs=34.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      .+++++|+|++|.+|.+.++.+... |.+++.+.+++++.+.
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~-G~~Vi~~~r~~~~~~~   47 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQ-GAHVIVSSRKLDGCQA   47 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            4678999999999999999888887 8999888887665433

>PRK09186 flagellin modification protein A; Provisional

Probab=92.47  E-value=0.31  Score=41.78  Aligned_cols=41  Identities=22%  Similarity=0.389  Sum_probs=34.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      .+++++|+|++|.+|...+..+... |.+++.+.+++++.+.
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~   43 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNE   43 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecChHHHHH
Confidence            5789999999999999988888877 8998888877766543

>PLN00198 anthocyanidin reductase; Provisional

Probab=92.46  E-value=0.61  Score=41.98  Aligned_cols=74  Identities=19%  Similarity=0.325  Sum_probs=47.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH---HHc---CCCEEE--eCCC-CChhhhccCccEEE
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV---KEL---GADKVI--DYRK-TKYEDIEEKFDVLY  217 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~---~~~---g~~~v~--~~~~-~~~~~~~~~~d~v~  217 (327)
                      ..+.+|||+||+|-+|...+..+... |.++++++++..+....   ..+   +.-.++  |-.+ ........++|.+|
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQK-GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            34788999999999999988888877 88887777665443322   122   111122  2111 22333446799999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .+++
T Consensus        86 h~A~   89 (338)
T PLN00198         86 HVAT   89 (338)
T ss_pred             EeCC
Confidence            8886

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=92.46  E-value=1.7  Score=35.41  Aligned_cols=95  Identities=17%  Similarity=0.237  Sum_probs=58.2

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCE--EEeCCCCChhhhccCcc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADK--VIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~d  214 (327)
                      +....+.++.+||=+| ||. |..+..+++...+.+++.++.+++..+.+++    .+...  ++..+.  .......+|
T Consensus        24 ~~~l~~~~~~~vLDiG-~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~--~~~~~~~~D   99 (187)
T PRK08287         24 LSKLELHRAKHLIDVG-AGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEA--PIELPGKAD   99 (187)
T ss_pred             HHhcCCCCCCEEEEEC-CcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCc--hhhcCcCCC
Confidence            3456677888888887 554 6667777776535678888888887666643    44322  222111  111224689


Q ss_pred             EEEeCCC--Cc----hhhhhhhcCCCcEEEe
Q 020320          215 VLYDTIG--DC----KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       215 ~v~d~~g--~~----~~~~~~l~~~g~~v~~  239 (327)
                      +++....  ..    ..+.+.|+++|.++..
T Consensus       100 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287        100 AIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             EEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            9985432  22    4567889999988663

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.46  E-value=1.5  Score=38.67  Aligned_cols=95  Identities=15%  Similarity=0.148  Sum_probs=64.0

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++....+..++..+. -.|++|.|.|.++.+|.-.+.++... |+.+.+.-+...                   +..
T Consensus       138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~-gatVtv~~~~t~-------------------~l~  197 (301)
T PRK14194        138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA-HCSVTVVHSRST-------------------DAK  197 (301)
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEECCCCC-------------------CHH
Confidence            446655445555555544 57999999996679999888888877 887766533221                   234


Q ss_pred             hhccCccEEEeCCCCchhh-hhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCKNS-FVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~~~-~~~l~~~g~~v~~g~~~  243 (327)
                      +..+.+|+++-++|..... -..+++|..++.+|...
T Consensus       198 e~~~~ADIVIsavg~~~~v~~~~ik~GaiVIDvgin~  234 (301)
T PRK14194        198 ALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGINR  234 (301)
T ss_pred             HHHhcCCEEEEecCChhcccHhhccCCcEEEEecccc
Confidence            4456788999888865222 23478888888998654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=92.45  E-value=0.45  Score=41.66  Aligned_cols=73  Identities=22%  Similarity=0.261  Sum_probs=45.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhhhccCccEEEeCCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFV-KELGADKV-IDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      ..+++++|+| +|+.+.+++..++.. |+ ++.++-++.+|.+.+ +.++.... +.............+|++++++.
T Consensus       124 ~~~~~vlilG-AGGAarAv~~aL~~~-g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp  199 (283)
T COG0169         124 VTGKRVLILG-AGGAARAVAFALAEA-GAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLEEADLLINATP  199 (283)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccccccCEEEECCC
Confidence            3589999999 899999999888888 75 566666877775554 44442110 10000000011115899999975

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=92.37  E-value=2.1  Score=31.65  Aligned_cols=68  Identities=29%  Similarity=0.294  Sum_probs=50.1

Q ss_pred             EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh----hccCccEEEeCCCC
Q 020320          152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED----IEEKFDVLYDTIGD  222 (327)
Q Consensus       152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~~~~~d~v~d~~g~  222 (327)
                      |+|.| .|.+|...++.++.. +.++++++.++++.+.+++.|.. ++..+..+...    .+..++.++-+.+.
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~-~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~   72 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEG-GIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDD   72 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSS
T ss_pred             eEEEc-CCHHHHHHHHHHHhC-CCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCC
Confidence            67888 899999999999985 77899999999999999888854 45444443322    23578888877764

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK14982 acyl-ACP reductase; Provisional

Probab=92.35  E-value=0.74  Score=41.45  Aligned_cols=92  Identities=18%  Similarity=0.281  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCCCCch
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCK  224 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~  224 (327)
                      -.+++|+|+||+|.+|..++..+....+. +++.+.+++++...+ ++++...+.     ++...+.++|+++.+++...
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~l~~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----SLEEALPEADIVVWVASMPK  227 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----hHHHHHccCCEEEECCcCCc
Confidence            46789999998899998887777533254 455555666655444 344321111     24455678999998887532


Q ss_pred             h---hhhhhcCCCcEEEeeCCC
Q 020320          225 N---SFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       225 ~---~~~~l~~~g~~v~~g~~~  243 (327)
                      .   ....++++-.+++.+.|.
T Consensus       228 ~~~I~~~~l~~~~~viDiAvPR  249 (340)
T PRK14982        228 GVEIDPETLKKPCLMIDGGYPK  249 (340)
T ss_pred             CCcCCHHHhCCCeEEEEecCCC
Confidence            2   114456666777776654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=92.32  E-value=0.31  Score=43.65  Aligned_cols=41  Identities=24%  Similarity=0.320  Sum_probs=34.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      .+++++|+||+|++|..++..+... |.+++++.+++++.+.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~   45 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKR-GWHVIMACRNLKKAEA   45 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHH
Confidence            4788999999999999988877777 8999888887766543

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=92.31  E-value=0.68  Score=41.17  Aligned_cols=73  Identities=18%  Similarity=0.360  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH---HHHHHcC-CC---EEE--e-CCCCChhhhccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV---EFVKELG-AD---KVI--D-YRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~---~~~~~~g-~~---~v~--~-~~~~~~~~~~~~~d~v~  217 (327)
                      .+..|+|+||+|=+|...+..+... |++|.+++|+++..   ++++++. +.   .++  | .+...+.+.+.|.|.||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~r-GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf   83 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSR-GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF   83 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhC-CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence            5789999999999999999999988 99999999877753   3466655 21   122  1 12244555668899999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .++.
T Consensus        84 H~As   87 (327)
T KOG1502|consen   84 HTAS   87 (327)
T ss_pred             EeCc
Confidence            8765

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.31  E-value=1.6  Score=38.25  Aligned_cols=94  Identities=14%  Similarity=0.190  Sum_probs=63.9

Q ss_pred             cchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHh--hcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh
Q 020320          130 LPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKH--FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY  206 (327)
Q Consensus       130 ~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~--~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (327)
                      .|++....+..++..+. -.|++++|.|.+..+|.=.+.++..  . ++.+. ++-+                  +..+.
T Consensus       138 ~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~-~atVt-vchs------------------~T~~l  197 (284)
T PRK14193        138 LPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSE-NATVT-LCHT------------------GTRDL  197 (284)
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccC-CCEEE-EeCC------------------CCCCH
Confidence            45555555555665554 3699999999999999888888876  3 55442 2211                  12234


Q ss_pred             hhhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          207 EDIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       207 ~~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ....+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       198 ~~~~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvGin~  235 (284)
T PRK14193        198 AAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSR  235 (284)
T ss_pred             HHHHHhCCEEEEecCCcCccCHHHcCCCCEEEEccccc
Confidence            445567899999999763 3346788999999998665

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.27  E-value=1.7  Score=37.94  Aligned_cols=95  Identities=17%  Similarity=0.172  Sum_probs=64.1

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..++ -.|++++|.|.+..+|.=.+.++... ++.+. ++-+                  ...+..
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~-~AtVt-i~hs------------------~T~~l~  195 (281)
T PRK14183        136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNA-NATVD-ICHI------------------FTKDLK  195 (281)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEE-EeCC------------------CCcCHH
Confidence            345554445555555554 57899999998889999888888876 76554 2222                  111233


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       196 ~~~~~ADIvV~AvGkp~~i~~~~vk~gavvIDvGin~  232 (281)
T PRK14183        196 AHTKKADIVIVGVGKPNLITEDMVKEGAIVIDIGINR  232 (281)
T ss_pred             HHHhhCCEEEEecCcccccCHHHcCCCcEEEEeeccc
Confidence            34567899999999663 3446788888888998654

>PRK06172 short chain dehydrogenase; Provisional

Probab=92.26  E-value=0.33  Score=41.58  Aligned_cols=40  Identities=30%  Similarity=0.434  Sum_probs=33.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      .+++++|+|++|.+|..++..+... |.+++++.+++++.+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~   45 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFARE-GAKVVVADRDAAGGE   45 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHH
Confidence            4689999999999999988877777 889888888776543

>PRK06197 short chain dehydrogenase; Provisional

Probab=92.26  E-value=0.29  Score=43.47  Aligned_cols=40  Identities=23%  Similarity=0.287  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      .+++++|+||+|++|.+++..+... |.+++++.++.++.+
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~   54 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGK   54 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence            5789999999999999988877777 888888888766543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=92.26  E-value=0.92  Score=40.48  Aligned_cols=40  Identities=23%  Similarity=0.286  Sum_probs=32.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHH
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEF  189 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~  189 (327)
                      +++++|+|+++++|.+++..+... | .+++.+.+++++.+.
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~-G~~~V~l~~r~~~~~~~   43 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAAT-GEWHVIMACRDFLKAEQ   43 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHc-CCCEEEEEeCCHHHHHH
Confidence            578999999999999988777767 8 888888887765543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=92.25  E-value=0.8  Score=41.09  Aligned_cols=104  Identities=18%  Similarity=0.231  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-hhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAK-HFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~-~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  223 (327)
                      .|+++.|+| .|.+|...++.++ .+ |.++++..+... .+....++...      .++.+.+...|+++-+....   
T Consensus       144 ~gktvGIiG-~G~IG~~va~~l~~~f-gm~V~~~~~~~~-~~~~~~~~~~~------~~l~ell~~sDvv~lh~plt~~T  214 (323)
T PRK15409        144 HHKTLGIVG-MGRIGMALAQRAHFGF-NMPILYNARRHH-KEAEERFNARY------CDLDTLLQESDFVCIILPLTDET  214 (323)
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHhcC-CCEEEEECCCCc-hhhHHhcCcEe------cCHHHHHHhCCEEEEeCCCChHH
Confidence            578999999 9999999999998 76 998887765432 22223344321      13555667889988776521   


Q ss_pred             -----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 -----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 -----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                           ...+..|+++..++.++-...          ++   -+.+++.+++|++.
T Consensus       215 ~~li~~~~l~~mk~ga~lIN~aRG~v----------Vd---e~AL~~AL~~g~i~  256 (323)
T PRK15409        215 HHLFGAEQFAKMKSSAIFINAGRGPV----------VD---ENALIAALQKGEIH  256 (323)
T ss_pred             hhccCHHHHhcCCCCeEEEECCCccc----------cC---HHHHHHHHHcCCee
Confidence                 446778888888877753221          11   23556677777775

>PRK06932 glycerate dehydrogenase; Provisional

Probab=92.24  E-value=0.69  Score=41.35  Aligned_cols=100  Identities=22%  Similarity=0.279  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|..++++++.+ |.++++..+....     ....      .-.++.+.+...|+++-+....    
T Consensus       146 ~gktvgIiG-~G~IG~~va~~l~~f-g~~V~~~~~~~~~-----~~~~------~~~~l~ell~~sDiv~l~~Plt~~T~  212 (314)
T PRK06932        146 RGSTLGVFG-KGCLGTEVGRLAQAL-GMKVLYAEHKGAS-----VCRE------GYTPFEEVLKQADIVTLHCPLTETTQ  212 (314)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhcC-CCEEEEECCCccc-----cccc------ccCCHHHHHHhCCEEEEcCCCChHHh
Confidence            478999999 999999999999998 9998877643211     0110      1123555667889998777521    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..|+++..++.++-...          ++   -..+.+.+++|++.
T Consensus       213 ~li~~~~l~~mk~ga~lIN~aRG~~----------Vd---e~AL~~aL~~g~i~  253 (314)
T PRK06932        213 NLINAETLALMKPTAFLINTGRGPL----------VD---EQALLDALENGKIA  253 (314)
T ss_pred             cccCHHHHHhCCCCeEEEECCCccc----------cC---HHHHHHHHHcCCcc
Confidence                456788899998888864331          11   24567778888886

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.24  E-value=0.85  Score=38.86  Aligned_cols=39  Identities=18%  Similarity=0.318  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKV  187 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~  187 (327)
                      .+.+++|+||+|.+|..++..+... |.++++. .++.++.
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~-g~~v~~~~~r~~~~~   42 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEE-GYDIAVNYARSRKAA   42 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHH
Confidence            4679999999999999988888877 8887764 4555443

>PLN03075 nicotianamine synthase; Provisional

Probab=92.17  E-value=1.1  Score=39.52  Aligned_cols=93  Identities=16%  Similarity=0.168  Sum_probs=60.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhh-cCCcEEEEeCCcccHHHHHHc-----CCCEEEeCCCCChh---hhccCccEEE
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHF-YGASHVVATTSTPKVEFVKEL-----GADKVIDYRKTKYE---DIEEKFDVLY  217 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~-~g~~~v~~~~~~~~~~~~~~~-----g~~~v~~~~~~~~~---~~~~~~d~v~  217 (327)
                      .+.++|+-+| +|+.++.++.+++.+ .+.+++.++.+++..+.+++.     |...-+.....+..   ...+++|+||
T Consensus       122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF  200 (296)
T PLN03075        122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF  200 (296)
T ss_pred             CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence            3779999999 999999888887655 245677888888877777543     21121111111111   1236799999


Q ss_pred             eCC--C----C----chhhhhhhcCCCcEEEee
Q 020320          218 DTI--G----D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       218 d~~--g----~----~~~~~~~l~~~g~~v~~g  240 (327)
                      -.+  +    .    .....+.|++||.++...
T Consensus       201 ~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        201 LAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            554  1    1    155678899999987664

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=92.14  E-value=0.34  Score=41.54  Aligned_cols=40  Identities=28%  Similarity=0.555  Sum_probs=33.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      .++++||+||+|.+|.+++..+... |.++++..+++++..
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~-G~~vvl~~r~~~~~~   47 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEY-GAEIIINDITAERAE   47 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCHHHHH
Confidence            4689999999999999988888877 899988888766543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=92.11  E-value=1.2  Score=37.83  Aligned_cols=73  Identities=25%  Similarity=0.474  Sum_probs=45.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-Ccc-cHHHHH---HcCCCEEE-eCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STP-KVEFVK---ELGADKVI-DYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~-~~~~~~---~~g~~~v~-~~~~~~~~~----------~~~  211 (327)
                      .+++++|+|++|.+|..+++.+... |.++++..+ ++. ..+.++   ..+..... ..+-.+..+          ...
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKD-GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999999998888887 888777553 222 222333   33443321 111122111          114


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|+++.+.|
T Consensus        81 ~id~li~~ag   90 (246)
T PRK12938         81 EIDVLVNNAG   90 (246)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=92.11  E-value=1.4  Score=38.48  Aligned_cols=89  Identities=15%  Similarity=0.242  Sum_probs=54.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH-HHHHcC---CCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE-FVKELG---ADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~-~~~~~g---~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      ...+++++|+| +|++|.+++..+... |.++.+..+++++.+ +++++.   ........+    .....+|+++++++
T Consensus       114 ~~~~k~vliiG-aGg~g~aia~~L~~~-g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~~~~DivInatp  187 (270)
T TIGR00507       114 LRPNQRVLIIG-AGGAARAVALPLLKA-DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE----LPLHRVDLIINATS  187 (270)
T ss_pred             CccCCEEEEEc-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh----hcccCccEEEECCC
Confidence            34578999999 689999988888777 787777777766543 334433   212221111    12246899999986


Q ss_pred             Cc-----h---hhhhhhcCCCcEEEee
Q 020320          222 DC-----K---NSFVVAKDNAPIVDIT  240 (327)
Q Consensus       222 ~~-----~---~~~~~l~~~g~~v~~g  240 (327)
                      ..     .   .....++++..++.+.
T Consensus       188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~  214 (270)
T TIGR00507       188 AGMSGNIDEPPVPAEKLKEGMVVYDMV  214 (270)
T ss_pred             CCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence            32     1   1123455665665553

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=92.09  E-value=1  Score=40.88  Aligned_cols=74  Identities=12%  Similarity=0.242  Sum_probs=47.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc--CCC-EEEeCCC---CChhhhccCccEEEeC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL--GAD-KVIDYRK---TKYEDIEEKFDVLYDT  219 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~--g~~-~v~~~~~---~~~~~~~~~~d~v~d~  219 (327)
                      ..+.+|||+||+|-+|..+++.+... |.+++++.++..+...+ ..+  +.. ..+..+-   ..+.....++|.|+.+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   86 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQR-GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV   86 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence            45779999999999999998888877 88888887765543322 222  111 1121111   1223334678999988


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      ++
T Consensus        87 A~   88 (353)
T PLN02896         87 AA   88 (353)
T ss_pred             Cc
Confidence            76

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=92.08  E-value=0.49  Score=41.74  Aligned_cols=73  Identities=18%  Similarity=0.260  Sum_probs=44.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCc---ccH-HHHHHcC---CC-EE--EeCCC-CChhhhccCcc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTST---PKV-EFVKELG---AD-KV--IDYRK-TKYEDIEEKFD  214 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~---~~~-~~~~~~g---~~-~v--~~~~~-~~~~~~~~~~d  214 (327)
                      ..+++++|+| +|++|.+++..+... |++ +++..+++   ++. ++++++.   .. .+  .+..+ .........+|
T Consensus       124 ~~~k~vlI~G-AGGagrAia~~La~~-G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D  201 (289)
T PRK12548        124 VKGKKLTVIG-AGGAATAIQVQCALD-GAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD  201 (289)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence            3578999999 589999988877777 876 66666765   333 3334342   11 11  12211 12222345689


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++.
T Consensus       202 ilINaTp  208 (289)
T PRK12548        202 ILVNATL  208 (289)
T ss_pred             EEEEeCC
Confidence            9999874

>PLN02650 dihydroflavonol-4-reductase

Probab=92.06  E-value=0.67  Score=41.98  Aligned_cols=73  Identities=18%  Similarity=0.277  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc----CC--C-EEE--eCCC-CChhhhccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL----GA--D-KVI--DYRK-TKYEDIEEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~----g~--~-~v~--~~~~-~~~~~~~~~~d~v~  217 (327)
                      ..++|||+||+|-+|...+..+... |.++++++++.++......+    +.  . ..+  |-.+ ..+.....++|.||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi   82 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLER-GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF   82 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHC-CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence            4578999999999999988888877 88888888765544332221    11  1 112  2111 23334456789999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .+++
T Consensus        83 H~A~   86 (351)
T PLN02650         83 HVAT   86 (351)
T ss_pred             EeCC
Confidence            8775

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=92.04  E-value=1.2  Score=38.04  Aligned_cols=108  Identities=20%  Similarity=0.351  Sum_probs=69.5

Q ss_pred             HHHHHHHH--HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCCh
Q 020320          133 AVQTAIEG--FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKY  206 (327)
Q Consensus       133 ~~~ta~~~--l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~  206 (327)
                      ..-..|.-  +...+..+|++||=++  ++.|-.+..+++..+..++++++-|+..++.+++    .|... +.....+.
T Consensus        34 g~~~~Wr~~~i~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dA  110 (238)
T COG2226          34 GLHRLWRRALISLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDA  110 (238)
T ss_pred             cchHHHHHHHHHhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEech
Confidence            33445653  2456666899998774  6678899999998855678888889998887754    23221 11111111


Q ss_pred             hhh---ccCccEEEeCCC-----C----chhhhhhhcCCCcEEEeeCCC
Q 020320          207 EDI---EEKFDVLYDTIG-----D----CKNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       207 ~~~---~~~~d~v~d~~g-----~----~~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...   -..+|++.-+.|     .    +..+.+.|+|+|+++......
T Consensus       111 e~LPf~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~  159 (238)
T COG2226         111 ENLPFPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK  159 (238)
T ss_pred             hhCCCCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence            111   135788877766     1    256678999999988876543

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=92.03  E-value=0.67  Score=46.03  Aligned_cols=76  Identities=14%  Similarity=0.036  Sum_probs=47.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc-CCCEEE-eCCCC-C-hhhhccCccEEEeCCC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL-GADKVI-DYRKT-K-YEDIEEKFDVLYDTIG  221 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~-g~~~v~-~~~~~-~-~~~~~~~~d~v~d~~g  221 (327)
                      .+++.+|||+||+|-+|...++.+...+|.+++++++.+......... +.+.+. |-.+. . ....+.++|+||.+++
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa  391 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVA  391 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECcc
Confidence            467889999999999999998877764368888888765433221111 222221 11111 1 1233468999998775

>PRK05650 short chain dehydrogenase; Provisional

Probab=92.02  E-value=1.1  Score=38.72  Aligned_cols=70  Identities=21%  Similarity=0.289  Sum_probs=45.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-EeCCCCChhh---h-------ccCccE
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-IDYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~---~-------~~~~d~  215 (327)
                      +++|+|++|.+|...+..+... |.+++++.+++++.+.+    +..+.+.. +..+-.+..+   .       ..++|.
T Consensus         2 ~vlVtGasggIG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWARE-GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999988777777 99988888876654432    22333322 2111111111   1       146899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++.+.|
T Consensus        81 lI~~ag   86 (270)
T PRK05650         81 IVNNAG   86 (270)
T ss_pred             EEECCC
Confidence            999987

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.99  E-value=0.88  Score=42.83  Aligned_cols=73  Identities=18%  Similarity=0.378  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc---HHHHHHcCCCEE-EeCCCCCh-hhh-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK---VEFVKELGADKV-IDYRKTKY-EDI-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~---~~~~~~~g~~~v-~~~~~~~~-~~~-------~~~~d~  215 (327)
                      ++++++|+|++|++|.++++.+... |++++++.++...   .+..++++...+ +|-.+... ...       ..++|.
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~-Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARD-GAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            5789999999999999999888877 9998887764322   223345554432 23222111 111       136899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++++.|
T Consensus       288 vi~~AG  293 (450)
T PRK08261        288 VVHNAG  293 (450)
T ss_pred             EEECCC
Confidence            999987

>PRK06101 short chain dehydrogenase; Provisional

Probab=91.99  E-value=0.34  Score=41.23  Aligned_cols=42  Identities=12%  Similarity=0.236  Sum_probs=34.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE  192 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~  192 (327)
                      .+++|+||+|++|...+..+... |.+++++.+++++.+.+.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~   43 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQ-GWQVIACGRNQSVLDELHT   43 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH
Confidence            57899999999999877777777 9999988888777665544

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=91.97  E-value=0.79  Score=43.59  Aligned_cols=69  Identities=20%  Similarity=0.270  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-----cHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-----KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-----~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      ..+++|+|+| .|.+|+.++.+++.. |.++.+.+.++.     ..+.+++.|.+........    ....+|+|+-+.|
T Consensus        14 ~~~~~v~viG-~G~~G~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~----~~~~~D~Vv~s~G   87 (480)
T PRK01438         14 WQGLRVVVAG-LGVSGFAAADALLEL-GARVTVVDDGDDERHRALAAILEALGATVRLGPGPT----LPEDTDLVVTSPG   87 (480)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc----ccCCCCEEEECCC
Confidence            3567999999 899999999999988 988888775442     1234556676544332211    2346888988887

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=91.96  E-value=1.7  Score=39.20  Aligned_cols=94  Identities=19%  Similarity=0.264  Sum_probs=63.9

Q ss_pred             cchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320          130 LPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED  208 (327)
Q Consensus       130 ~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (327)
                      +|++....+..++..++ -.|++++|+|.+..+|.=...++... ++.+.+.-                   .+..+...
T Consensus       211 ~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~-~ATVTicH-------------------s~T~nl~~  270 (364)
T PLN02616        211 VPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVH-------------------SRTKNPEE  270 (364)
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHC-CCeEEEeC-------------------CCCCCHHH
Confidence            45554444444554443 47899999999999998888888776 66554321                   22233444


Q ss_pred             hccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          209 IEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       209 ~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ..+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       271 ~~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVGIn~  306 (364)
T PLN02616        271 ITREADIIISAVGQPNMVRGSWIKPGAVVIDVGINP  306 (364)
T ss_pred             HHhhCCEEEEcCCCcCcCCHHHcCCCCEEEeccccc
Confidence            5577999999999764 3446789999999998755

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=91.92  E-value=0.4  Score=40.89  Aligned_cols=41  Identities=17%  Similarity=0.344  Sum_probs=34.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV  187 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~  187 (327)
                      ..++++++|+|++|.+|...++.+... |.+++++.++.++.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~-G~~Vi~~~r~~~~~   49 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARH-GATVILLGRTEEKL   49 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHC-CCcEEEEeCCHHHH
Confidence            457889999999999999988888777 88999888876654

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=91.91  E-value=0.68  Score=35.33  Aligned_cols=86  Identities=22%  Similarity=0.370  Sum_probs=52.2

Q ss_pred             EEEEcCCchHHHHHHHHHHhhcC-CcEEEEeC--Cccc-HHHHHHcCCCEEEeCCCCChhh---h---------------
Q 020320          152 IFIVGGAGGVGTLVIQLAKHFYG-ASHVVATT--STPK-VEFVKELGADKVIDYRKTKYED---I---------------  209 (327)
Q Consensus       152 vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~--~~~~-~~~~~~~g~~~v~~~~~~~~~~---~---------------  209 (327)
                      |.|+|++|.+|..+..+.+.... .+++....  +-++ .+.++++.+..+.-.++.....   .               
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            57999999999999999998832 45665553  3222 3455778887766544322111   0               


Q ss_pred             -----c--cCccEEEeCC-C--CchhhhhhhcCCCcEE
Q 020320          210 -----E--EKFDVLYDTI-G--DCKNSFVVAKDNAPIV  237 (327)
Q Consensus       210 -----~--~~~d~v~d~~-g--~~~~~~~~l~~~g~~v  237 (327)
                           .  ..+|+++.+. |  ++...+.+++.+-++.
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia  118 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA  118 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence                 0  3589998875 5  3466777777665543

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK07340 ornithine cyclodeaminase; Validated

Probab=91.90  E-value=1.8  Score=38.50  Aligned_cols=96  Identities=13%  Similarity=0.062  Sum_probs=60.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHH-HHHHcCCC--EEEeCCCCChhhhccCccEEE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVE-FVKELGAD--KVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~-~~~~~g~~--~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      +........+++|+| +|..|.+.+..+....+.+ +.+..+++++.+ +++++...  .+.   ..+..+...++|+|+
T Consensus       118 ~~La~~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~---~~~~~~av~~aDiVi  193 (304)
T PRK07340        118 RTLAPAPPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE---PLDGEAIPEAVDLVV  193 (304)
T ss_pred             HHhCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE---ECCHHHHhhcCCEEE
Confidence            333345678999999 8999998888776543655 445556766543 44555321  111   133444567999999


Q ss_pred             eCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          218 DTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       218 d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      .++.+.   ...  .++++-.+..+|...
T Consensus       194 taT~s~~Pl~~~--~~~~g~hi~~iGs~~  220 (304)
T PRK07340        194 TATTSRTPVYPE--AARAGRLVVAVGAFT  220 (304)
T ss_pred             EccCCCCceeCc--cCCCCCEEEecCCCC
Confidence            998743   222  368888888888654

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=91.85  E-value=1.8  Score=38.90  Aligned_cols=95  Identities=18%  Similarity=0.193  Sum_probs=64.6

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..++ -.|++++|.|.+..+|.=.+.++... ++.+.+.-.                   +..+..
T Consensus       193 ~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~-~ATVTicHs-------------------~T~nl~  252 (345)
T PLN02897        193 FVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRH-DATVSTVHA-------------------FTKDPE  252 (345)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHC-CCEEEEEcC-------------------CCCCHH
Confidence            345554444444554443 47899999999999998888888876 765533221                   122334


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       253 ~~~~~ADIvIsAvGkp~~v~~d~vk~GavVIDVGin~  289 (345)
T PLN02897        253 QITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTP  289 (345)
T ss_pred             HHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccc
Confidence            45567899999999763 3446789999999998755

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.84  E-value=1.1  Score=38.50  Aligned_cols=73  Identities=22%  Similarity=0.305  Sum_probs=45.0

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHhhcCCcEEEEeCCc--ccH-HHHHHcCCC-EEEeCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGG--AGGVGTLVIQLAKHFYGASHVVATTST--PKV-EFVKELGAD-KVIDYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga--~g~~G~~a~~la~~~~g~~~v~~~~~~--~~~-~~~~~~g~~-~v~~~~~~~~~~----------~~~  211 (327)
                      .+++++|+|+  ++++|.+++..+... |+++++..++.  +.. +..++++.. ..+..+-.+..+          ...
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQ-GAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD   84 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHC-CCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4689999998  799999988877777 89888877543  222 233444421 122111111111          124


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        85 ~iD~li~nAG   94 (256)
T PRK07889         85 GLDGVVHSIG   94 (256)
T ss_pred             CCcEEEEccc
Confidence            6899998876

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=91.81  E-value=0.39  Score=41.28  Aligned_cols=73  Identities=22%  Similarity=0.415  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChh---hh-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYE---DI-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~---~~-------~~~~d~  215 (327)
                      .+++++|+|++|.+|..++..+... |.+++.+.++.++.+.+ ++++.... +..+-.+..   ..       ...+|.
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3678999999999999998888877 99999888877765443 33442211 211111111   11       136899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      ++.+.|
T Consensus        84 li~~ag   89 (257)
T PRK07067         84 LFNNAA   89 (257)
T ss_pred             EEECCC
Confidence            998876

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.78  E-value=2.2  Score=37.28  Aligned_cols=94  Identities=18%  Similarity=0.224  Sum_probs=64.0

Q ss_pred             cchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320          130 LPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED  208 (327)
Q Consensus       130 ~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (327)
                      +|++....+..++..++ -.|++++|.|.+..+|.=...++... ++.+.+.-                   ++..+...
T Consensus       137 ~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~AtVtich-------------------s~T~nl~~  196 (282)
T PRK14182        137 RPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLER-HATVTIAH-------------------SRTADLAG  196 (282)
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeC-------------------CCCCCHHH
Confidence            45554445555555443 47999999999999999988888876 76544321                   11223344


Q ss_pred             hccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          209 IEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       209 ~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ..+.+|+++-++|..+ -.-..++++..++.+|...
T Consensus       197 ~~~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvGin~  232 (282)
T PRK14182        197 EVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNR  232 (282)
T ss_pred             HHhhCCEEEEecCCcCccCHHHcCCCCEEEEeecee
Confidence            4567899999999663 3346778888899998654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.77  E-value=1  Score=38.19  Aligned_cols=39  Identities=26%  Similarity=0.525  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccHH
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVE  188 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~~  188 (327)
                      +++++|+|++|.+|...+..+... |.+++++ .+++++.+
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~-g~~v~~~~~r~~~~~~   44 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKE-GAKVVIAYDINEEAAQ   44 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHH
Confidence            568999999999999988877767 8888888 66665543

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=91.77  E-value=1.2  Score=40.03  Aligned_cols=102  Identities=19%  Similarity=0.210  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|.+|.|+| .|.+|...+..++.. |.++++.++++.....   . ..     ...++.+.....|+++-++...    
T Consensus       145 ~g~~VgIIG-~G~IG~~vA~~L~~~-G~~V~~~d~~~~~~~~---~-~~-----~~~~l~ell~~aDiVil~lP~t~~t~  213 (330)
T PRK12480        145 KNMTVAIIG-TGRIGAATAKIYAGF-GATITAYDAYPNKDLD---F-LT-----YKDSVKEAIKDADIISLHVPANKESY  213 (330)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEeCChhHhhh---h-hh-----ccCCHHHHHhcCCEEEEeCCCcHHHH
Confidence            577899999 999999999999987 9999988876543211   0 00     1123455667899999887632    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..++++..++..+-...          +   +-..+++.+.+|++.
T Consensus       214 ~li~~~~l~~mk~gavlIN~aRG~~----------v---d~~aL~~aL~~g~i~  254 (330)
T PRK12480        214 HLFDKAMFDHVKKGAILVNAARGAV----------I---NTPDLIAAVNDGTLL  254 (330)
T ss_pred             HHHhHHHHhcCCCCcEEEEcCCccc----------c---CHHHHHHHHHcCCee
Confidence                234566777777776653221          1   134567788888875

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=91.77  E-value=1.4  Score=37.36  Aligned_cols=37  Identities=22%  Similarity=0.426  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .+++++|+|++|.+|...+..+... |.++++..+++.
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~-G~~v~~~~~~~~   40 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQ-GANVVINYASSE   40 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCch
Confidence            4578999999999999999888877 888877776544

>PRK06701 short chain dehydrogenase; Provisional

Probab=91.75  E-value=1.2  Score=39.26  Aligned_cols=37  Identities=27%  Similarity=0.419  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      -.++++||+||+|.+|..++..+... |.+++++.+++
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~-G~~V~l~~r~~   80 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKE-GADIAIVYLDE   80 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence            45789999999999999988877777 89888887654

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=91.73  E-value=1  Score=43.31  Aligned_cols=83  Identities=22%  Similarity=0.305  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...+..++.+ |.++++.++... .+...++|...+      ++.+.+...|+++-++...    
T Consensus       139 ~gktvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~-~~~~~~~g~~~~------~l~ell~~aDiV~l~lP~t~~t~  209 (526)
T PRK13581        139 YGKTLGIIG-LGRIGSEVAKRAKAF-GMKVIAYDPYIS-PERAAQLGVELV------SLDELLARADFITLHTPLTPETR  209 (526)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCC-hhHHHhcCCEEE------cHHHHHhhCCEEEEccCCChHhh
Confidence            488999999 999999999999988 999988886432 223334444322      2333445566666555421    


Q ss_pred             ----hhhhhhhcCCCcEEEe
Q 020320          224 ----KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~  239 (327)
                          ...+..++++..++.+
T Consensus       210 ~li~~~~l~~mk~ga~lIN~  229 (526)
T PRK13581        210 GLIGAEELAKMKPGVRIINC  229 (526)
T ss_pred             cCcCHHHHhcCCCCeEEEEC
Confidence                2334455555555544

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=91.69  E-value=0.43  Score=40.84  Aligned_cols=41  Identities=22%  Similarity=0.340  Sum_probs=34.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      .+++++|+|++|.+|..++..+... |.+++++.+++++.+.
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~   43 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKE-GAKVVIADLNDEAAAA   43 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHH
Confidence            4679999999999999988888777 8999988887765443

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=91.69  E-value=1.4  Score=40.31  Aligned_cols=34  Identities=15%  Similarity=0.271  Sum_probs=26.8

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHhhcCCcEEEEeC
Q 020320          147 KTGQTIFIVGGAGGVGTL--VIQLAKHFYGASHVVATT  182 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~--a~~la~~~~g~~~v~~~~  182 (327)
                      ..++++||+|+++++|++  +++.+ .. |+.++++..
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~-GA~Vi~v~~   74 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GA-GADTLGVFF   74 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-Hc-CCeEEEEec
Confidence            456899999999999999  45555 55 898887763

>PRK12937 short chain dehydrogenase; Provisional

Probab=91.66  E-value=1.4  Score=37.42  Aligned_cols=35  Identities=14%  Similarity=0.287  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      ++++++|+|++|.+|...+..+... |.+++++.++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~-g~~v~~~~~~   38 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAAD-GFAVAVNYAG   38 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCC
Confidence            5689999999999999988888877 8887776654

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=91.65  E-value=1.6  Score=38.43  Aligned_cols=72  Identities=17%  Similarity=0.273  Sum_probs=41.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcc---c-HHHHHHcCCC----EEEeCCCC--ChhhhccCccEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTP---K-VEFVKELGAD----KVIDYRKT--KYEDIEEKFDVL  216 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~---~-~~~~~~~g~~----~v~~~~~~--~~~~~~~~~d~v  216 (327)
                      .+++++|+| +|+.+.+++..+..+ |++ +.++.++++   + .+++++++..    ..+...+.  .+.+....+|++
T Consensus       123 ~~k~vlvlG-aGGaarAi~~~l~~~-g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv  200 (288)
T PRK12749        123 KGKTMVLLG-AGGASTAIGAQGAIE-GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL  200 (288)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence            567999999 788888877766666 764 555557643   3 3334444321    11111111  122234578999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++.
T Consensus       201 INaTp  205 (288)
T PRK12749        201 TNGTK  205 (288)
T ss_pred             EECCC
Confidence            99874

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=91.64  E-value=1.2  Score=39.91  Aligned_cols=74  Identities=18%  Similarity=0.221  Sum_probs=45.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHH-HHHcCC-CE-EE--eCCC-CChhhhccCccEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEF-VKELGA-DK-VI--DYRK-TKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~-~~~~g~-~~-v~--~~~~-~~~~~~~~~~d~v~d~~  220 (327)
                      .++++||+||+|.+|...+..+...+ +.++++..+++.+... .+.+.. .. .+  |-.+ ..+.+...++|++|.++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            46889999999999999888777662 2566666665544322 233321 11 12  2121 12233346799999987


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        83 g   83 (324)
T TIGR03589        83 A   83 (324)
T ss_pred             c
Confidence            6

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=91.56  E-value=0.46  Score=40.78  Aligned_cols=40  Identities=25%  Similarity=0.398  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      .+++++|+|++|.+|..++..+... |++++++.+++++.+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~-G~~v~~~~r~~~~~~   49 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGA-GAHVLVNGRNAATLE   49 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeCCHHHHH
Confidence            5789999999999999988877777 899988888766543

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=91.54  E-value=0.75  Score=45.24  Aligned_cols=88  Identities=19%  Similarity=0.221  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh--hh--hccCccEEEeCCCCch
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY--ED--IEEKFDVLYDTIGDCK  224 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~--~~~~~d~v~d~~g~~~  224 (327)
                      .++|+|.| .|.+|+..++.++.. |.++++++.++++.+.+++.|... +..+..+.  -+  ...+++.++-+++..+
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~~g~~v-~~GDat~~~~L~~agi~~A~~vvv~~~d~~  476 (621)
T PRK03562        400 QPRVIIAG-FGRFGQIVGRLLLSS-GVKMTVLDHDPDHIETLRKFGMKV-FYGDATRMDLLESAGAAKAEVLINAIDDPQ  476 (621)
T ss_pred             cCcEEEEe-cChHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHhcCCeE-EEEeCCCHHHHHhcCCCcCCEEEEEeCCHH
Confidence            46899999 999999999999988 999999999999999999888654 43333332  22  2357899998887531


Q ss_pred             ------hhhhhhcCCCcEEEe
Q 020320          225 ------NSFVVAKDNAPIVDI  239 (327)
Q Consensus       225 ------~~~~~l~~~g~~v~~  239 (327)
                            ...+.+.|.-+++..
T Consensus       477 ~n~~i~~~ar~~~p~~~iiaR  497 (621)
T PRK03562        477 TSLQLVELVKEHFPHLQIIAR  497 (621)
T ss_pred             HHHHHHHHHHHhCCCCeEEEE
Confidence                  223444555555543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=91.47  E-value=1.2  Score=39.21  Aligned_cols=73  Identities=27%  Similarity=0.423  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcCCchHHHH-HHHHHHhhcCCcEEEEeCCcccHHHHH-----HcCC---CEEEeCCCCC--hhh---hcc-
Q 020320          147 KTGQTIFIVGGAGGVGTL-VIQLAKHFYGASHVVATTSTPKVEFVK-----ELGA---DKVIDYRKTK--YED---IEE-  211 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~-a~~la~~~~g~~~v~~~~~~~~~~~~~-----~~g~---~~v~~~~~~~--~~~---~~~-  211 (327)
                      +-|++.+|+||+.++|.+ +-++|+ . |.+++.+.|+++|++..+     +.+.   .+++|....+  +..   .+. 
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-r-G~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~  124 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-R-GFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG  124 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-c-CCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC
Confidence            457999999999999987 677777 5 999999999999886662     3442   2245665555  322   233 


Q ss_pred             -CccEEEeCCC
Q 020320          212 -KFDVLYDTIG  221 (327)
Q Consensus       212 -~~d~v~d~~g  221 (327)
                       .+-++++++|
T Consensus       125 ~~VgILVNNvG  135 (312)
T KOG1014|consen  125 LDVGILVNNVG  135 (312)
T ss_pred             CceEEEEeccc
Confidence             3566779988

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=91.45  E-value=1.8  Score=37.11  Aligned_cols=95  Identities=13%  Similarity=0.157  Sum_probs=59.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC-CEEEeCCCCChhhhccCccEEEeCC
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA-DKVIDYRKTKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~d~v~d~~  220 (327)
                      ......++.+||-+| ||. |..+..+++ . +.+++.++.+++..+.+++... ...+..+..........+|+|+...
T Consensus        36 ~~l~~~~~~~vLDiG-cG~-G~~~~~l~~-~-~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~~~~~~~fD~V~s~~  111 (251)
T PRK10258         36 AMLPQRKFTHVLDAG-CGP-GWMSRYWRE-R-GSQVTALDLSPPMLAQARQKDAADHYLAGDIESLPLATATFDLAWSNL  111 (251)
T ss_pred             HhcCccCCCeEEEee-CCC-CHHHHHHHH-c-CCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccCcCCCCcEEEEEECc
Confidence            334445678899998 776 666666665 4 7889999999988888876432 2222222111111123589998654


Q ss_pred             C-----C----chhhhhhhcCCCcEEEee
Q 020320          221 G-----D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       221 g-----~----~~~~~~~l~~~g~~v~~g  240 (327)
                      .     .    +..+.+.|+++|.++...
T Consensus       112 ~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~  140 (251)
T PRK10258        112 AVQWCGNLSTALRELYRVVRPGGVVAFTT  140 (251)
T ss_pred             hhhhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            3     1    245668899999988764

>PRK08655 prephenate dehydrogenase; Provisional

Probab=91.43  E-value=1.1  Score=42.01  Aligned_cols=65  Identities=28%  Similarity=0.430  Sum_probs=43.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      +|.|+||+|.+|.+.+..++.. |..+++..+++++. +.+.++|....     .+.......+|+++-++.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~-G~~V~v~~r~~~~~~~~a~~~gv~~~-----~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEK-GFEVIVTGRDPKKGKEVAKELGVEYA-----NDNIDAAKDADIVIISVP   67 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHcCCeec-----cCHHHHhccCCEEEEecC
Confidence            6889987899999998888887 88888888777663 55566665211     112223345566665554

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.43  E-value=2.1  Score=37.42  Aligned_cols=95  Identities=16%  Similarity=0.176  Sum_probs=64.5

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..+. -.|.+++|+|.+..+|.-.+.++... ++.+.+.....                   .+..
T Consensus       131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~-~atVtv~hs~t-------------------~~L~  190 (279)
T PRK14178        131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNA-DATVTICHSKT-------------------ENLK  190 (279)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhC-CCeeEEEecCh-------------------hHHH
Confidence            345555445555555443 47899999998779999988888877 77666554332                   2234


Q ss_pred             hhccCccEEEeCCCCc-hhhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDC-KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~-~~~~~~l~~~g~~v~~g~~~  243 (327)
                      +..+.+|+++.++|.. .-.-..++++..++.+|...
T Consensus       191 ~~~~~ADIvI~Avgk~~lv~~~~vk~GavVIDVgi~~  227 (279)
T PRK14178        191 AELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQ  227 (279)
T ss_pred             HHHhhCCEEEECCCcccccCHHHcCCCcEEEEeeccc
Confidence            4456789999999854 22234579999999998654

>PRK09242 tropinone reductase; Provisional

Probab=91.42  E-value=0.47  Score=40.77  Aligned_cols=42  Identities=21%  Similarity=0.377  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+++++|+|++|.+|...+..+... |.+++++.+++++.+..
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~   49 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGL-GADVLIVARDADALAQA   49 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999998888877 89988888877655433

>PLN00203 glutamyl-tRNA reductase

Probab=91.42  E-value=0.81  Score=43.80  Aligned_cols=73  Identities=19%  Similarity=0.314  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  223 (327)
                      +.+|+|+| +|.+|.+++..+... |. +++++.++.++.+.+ .+++...+....-.+.......+|+||.++++.
T Consensus       266 ~kkVlVIG-AG~mG~~~a~~L~~~-G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~  340 (519)
T PLN00203        266 SARVLVIG-AGKMGKLLVKHLVSK-GCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSE  340 (519)
T ss_pred             CCEEEEEe-CHHHHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCC
Confidence            68999999 799999999888887 76 566666887775544 455421111111123344557899999998743

>PRK06436 glycerate dehydrogenase; Provisional

Probab=91.41  E-value=1.2  Score=39.62  Aligned_cols=81  Identities=25%  Similarity=0.327  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..++...      .+....    ..++.+.+...|+++.+....    
T Consensus       121 ~gktvgIiG-~G~IG~~vA~~l~af-G~~V~~~~r~~~~------~~~~~~----~~~l~ell~~aDiv~~~lp~t~~T~  188 (303)
T PRK06436        121 YNKSLGILG-YGGIGRRVALLAKAF-GMNIYAYTRSYVN------DGISSI----YMEPEDIMKKSDFVLISLPLTDETR  188 (303)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCcc------cCcccc----cCCHHHHHhhCCEEEECCCCCchhh
Confidence            589999999 999999999999988 9999988875321      122111    123445556788888777521    


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          ...+..++++..++.++
T Consensus       189 ~li~~~~l~~mk~ga~lIN~s  209 (303)
T PRK06436        189 GMINSKMLSLFRKGLAIINVA  209 (303)
T ss_pred             cCcCHHHHhcCCCCeEEEECC
Confidence                34566777777777665

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=91.41  E-value=1.9  Score=36.17  Aligned_cols=96  Identities=17%  Similarity=0.257  Sum_probs=62.3

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHH----HcCCCEEEeCCC-CChhhh-----cc
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVK----ELGADKVIDYRK-TKYEDI-----EE  211 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~----~~g~~~v~~~~~-~~~~~~-----~~  211 (327)
                      .++.+..+++|=+|  +.+|..++.+|..+. ..+.+.+..++++.+.++    +.|.+..+.-.. .+..+.     ..
T Consensus        54 L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~  131 (219)
T COG4122          54 LARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDG  131 (219)
T ss_pred             HHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCC
Confidence            34556778898887  677888999999885 245556668888877774    466555321111 122221     24


Q ss_pred             CccEEE-eCCCC-----chhhhhhhcCCCcEEEee
Q 020320          212 KFDVLY-DTIGD-----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       212 ~~d~v~-d~~g~-----~~~~~~~l~~~g~~v~~g  240 (327)
                      .+|++| |+.=.     .+..+..|++||.++.=.
T Consensus       132 ~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         132 SFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             CccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            689998 55422     266788999999887543

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=91.37  E-value=6.4  Score=33.08  Aligned_cols=85  Identities=14%  Similarity=0.273  Sum_probs=55.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhh-cCCcEEEE-eCCcccHHHHH-HcCCCEEEeCCCCChhhhccCccEEEeCCCC--c-h
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHF-YGASHVVA-TTSTPKVEFVK-ELGADKVIDYRKTKYEDIEEKFDVLYDTIGD--C-K  224 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~-~g~~~v~~-~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~--~-~  224 (327)
                      +|.+.| +|.+|...+.+.+.- ...+.+++ +++.++...+. .++...+     .+..+.+..+|++++|.+.  . +
T Consensus         2 ~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~-----s~ide~~~~~DlvVEaAS~~Av~e   75 (255)
T COG1712           2 KVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCV-----SDIDELIAEVDLVVEAASPEAVRE   75 (255)
T ss_pred             eEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCcc-----ccHHHHhhccceeeeeCCHHHHHH
Confidence            477888 999999999988841 02444444 46666665554 4443322     2233344789999999883  2 5


Q ss_pred             hhhhhhcCCCcEEEeeC
Q 020320          225 NSFVVAKDNAPIVDITW  241 (327)
Q Consensus       225 ~~~~~l~~~g~~v~~g~  241 (327)
                      ...+.|+.+--++.++.
T Consensus        76 ~~~~~L~~g~d~iV~SV   92 (255)
T COG1712          76 YVPKILKAGIDVIVMSV   92 (255)
T ss_pred             HhHHHHhcCCCEEEEec
Confidence            66677877777766654

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=91.35  E-value=0.7  Score=44.88  Aligned_cols=71  Identities=27%  Similarity=0.258  Sum_probs=53.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh--h--hccCccEEEeCCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE--D--IEEKFDVLYDTIGD  222 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--~--~~~~~d~v~d~~g~  222 (327)
                      .++++|.| +|.+|...++.++.. |.++++++.++++.+.+++.|...+. .+..+..  +  ..+.+|.++-+++.
T Consensus       417 ~~hiiI~G-~G~~G~~la~~L~~~-g~~vvvId~d~~~~~~~~~~g~~~i~-GD~~~~~~L~~a~i~~a~~viv~~~~  491 (558)
T PRK10669        417 CNHALLVG-YGRVGSLLGEKLLAA-GIPLVVIETSRTRVDELRERGIRAVL-GNAANEEIMQLAHLDCARWLLLTIPN  491 (558)
T ss_pred             CCCEEEEC-CChHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHCCCeEEE-cCCCCHHHHHhcCccccCEEEEEcCC
Confidence            37899999 999999999999988 89999999999999999888866544 3332221  1  23578888766654

>PRK06487 glycerate dehydrogenase; Provisional

Probab=91.35  E-value=0.91  Score=40.62  Aligned_cols=99  Identities=20%  Similarity=0.293  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|..++..++.+ |.++++..+.....      ...      ..++.+.+...|+++-+....    
T Consensus       147 ~gktvgIiG-~G~IG~~vA~~l~~f-gm~V~~~~~~~~~~------~~~------~~~l~ell~~sDiv~l~lPlt~~T~  212 (317)
T PRK06487        147 EGKTLGLLG-HGELGGAVARLAEAF-GMRVLIGQLPGRPA------RPD------RLPLDELLPQVDALTLHCPLTEHTR  212 (317)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhC-CCEEEEECCCCCcc------ccc------ccCHHHHHHhCCEEEECCCCChHHh
Confidence            467999999 999999999999988 99998877542110      111      123555667788888776521    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..|+++..++.++-...          ++   -..+++.+++|++.
T Consensus       213 ~li~~~~~~~mk~ga~lIN~aRG~v----------Vd---e~AL~~AL~~g~i~  253 (317)
T PRK06487        213 HLIGARELALMKPGALLINTARGGL----------VD---EQALADALRSGHLG  253 (317)
T ss_pred             cCcCHHHHhcCCCCeEEEECCCccc----------cC---HHHHHHHHHcCCee
Confidence                456778888888887763321          11   23556777778775

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=91.32  E-value=1.6  Score=37.63  Aligned_cols=96  Identities=9%  Similarity=0.145  Sum_probs=60.9

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCC-EEEeCCCCChhhhccCccEEEeC
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGAD-KVIDYRKTKYEDIEEKFDVLYDT  219 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~d~v~d~  219 (327)
                      +....+.++++||=+| || .|..+..+++...+.+++.++.++...+.+++.-.. .++..+...+. ....+|+++..
T Consensus        24 l~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~  100 (258)
T PRK01683         24 LARVPLENPRYVVDLG-CG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASWQ-PPQALDLIFAN  100 (258)
T ss_pred             HhhCCCcCCCEEEEEc-cc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhccC-CCCCccEEEEc
Confidence            3456677889999888 55 456677777766467888888998888777654221 12222211111 12368888854


Q ss_pred             CC-----C----chhhhhhhcCCCcEEEe
Q 020320          220 IG-----D----CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       220 ~g-----~----~~~~~~~l~~~g~~v~~  239 (327)
                      ..     .    ...+.++|+++|.++..
T Consensus       101 ~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683        101 ASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             cChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            33     1    14566889999998775

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=91.32  E-value=0.96  Score=39.00  Aligned_cols=35  Identities=20%  Similarity=0.185  Sum_probs=28.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .+++++|+||+  +++|.+++..+... |+++++..++
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~-G~~v~~~~~~   41 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAA-GAELGITYLP   41 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEEecC
Confidence            46899999975  79999988877777 9988776543

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=91.30  E-value=1.1  Score=35.69  Aligned_cols=84  Identities=21%  Similarity=0.253  Sum_probs=54.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCchh----
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKN----  225 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~----  225 (327)
                      .+|-++| .|.+|...+.-+... |.++.+..+++++.+.+.+.|+..+     .+..+.....|++|-++.....    
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~g~~~~-----~s~~e~~~~~dvvi~~v~~~~~v~~v   74 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAKA-GYEVTVYDRSPEKAEALAEAGAEVA-----DSPAEAAEQADVVILCVPDDDAVEAV   74 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHT-TTEEEEEESSHHHHHHHHHTTEEEE-----SSHHHHHHHBSEEEE-SSSHHHHHHH
T ss_pred             CEEEEEc-hHHHHHHHHHHHHhc-CCeEEeeccchhhhhhhHHhhhhhh-----hhhhhHhhcccceEeecccchhhhhh
Confidence            3688899 899998877776666 8999999999998888887774322     2344455677999988875311    


Q ss_pred             -----hhhhhcCCCcEEEee
Q 020320          226 -----SFVVAKDNAPIVDIT  240 (327)
Q Consensus       226 -----~~~~l~~~g~~v~~g  240 (327)
                           .+..+.++..++.++
T Consensus        75 ~~~~~i~~~l~~g~iiid~s   94 (163)
T PF03446_consen   75 LFGENILAGLRPGKIIIDMS   94 (163)
T ss_dssp             HHCTTHGGGS-TTEEEEE-S
T ss_pred             hhhhHHhhccccceEEEecC
Confidence                 344455555555553

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=91.26  E-value=1.3  Score=39.57  Aligned_cols=87  Identities=23%  Similarity=0.239  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC-Cc--
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG-DC--  223 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g-~~--  223 (327)
                      -.|++|.|+| .|.+|...++-++.. |..+....+.+.+.+.+.+.++.+      .++...+...|+++-+.. ..  
T Consensus       160 ~~gK~vgilG-~G~IG~~ia~rL~~F-g~~i~y~~r~~~~~~~~~~~~~~~------~d~~~~~~~sD~ivv~~pLt~~T  231 (336)
T KOG0069|consen  160 LEGKTVGILG-LGRIGKAIAKRLKPF-GCVILYHSRTQLPPEEAYEYYAEF------VDIEELLANSDVIVVNCPLTKET  231 (336)
T ss_pred             ccCCEEEEec-CcHHHHHHHHhhhhc-cceeeeecccCCchhhHHHhcccc------cCHHHHHhhCCEEEEecCCCHHH
Confidence            3589999999 999999999999995 854555557777777777777652      234555667888875543 21  


Q ss_pred             -----hhhhhhhcCCCcEEEeeC
Q 020320          224 -----KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       224 -----~~~~~~l~~~g~~v~~g~  241 (327)
                           ...+..|++++.++..+-
T Consensus       232 ~~liNk~~~~~mk~g~vlVN~aR  254 (336)
T KOG0069|consen  232 RHLINKKFIEKMKDGAVLVNTAR  254 (336)
T ss_pred             HHHhhHHHHHhcCCCeEEEeccc
Confidence                 456778888888887753

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=91.25  E-value=1.6  Score=34.61  Aligned_cols=67  Identities=19%  Similarity=0.281  Sum_probs=43.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh------------ccCccEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI------------EEKFDVL  216 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------------~~~~d~v  216 (327)
                      ..+|+|+|+-|.+|.++++..|+. +.-+..++.++...     .....+++.+..-..+.            .+.+|.|
T Consensus         3 agrVivYGGkGALGSacv~~Fkan-nywV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav   76 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKAN-NYWVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV   76 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhc-CeEEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence            357999999999999999999987 77666666543322     12233344333222221            1368999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      |...|
T Consensus        77 ~CVAG   81 (236)
T KOG4022|consen   77 FCVAG   81 (236)
T ss_pred             EEeec
Confidence            97765

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=91.24  E-value=0.43  Score=40.75  Aligned_cols=41  Identities=27%  Similarity=0.387  Sum_probs=33.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      ++++||+|++|.+|...+..+... |.+++++.+++++.+.+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~-g~~v~~~~r~~~~~~~~   41 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAA-GANVVVNDLGEAGAEAA   41 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            357999999999999988887777 88888888877655444

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=91.22  E-value=0.47  Score=40.40  Aligned_cols=39  Identities=21%  Similarity=0.339  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV  187 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~  187 (327)
                      .+++++|+||+|.+|...+..+... |.+++++.+++++.
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~-g~~V~~~~r~~~~~   43 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAAD-GAEVIVVDICGDDA   43 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHH
Confidence            4678999999999999988887777 88888888876544

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=91.18  E-value=1.3  Score=42.64  Aligned_cols=66  Identities=23%  Similarity=0.384  Sum_probs=43.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      .|+++.|+| .|.+|...+..++.+ |.++++.++... .+.+.++|...+     .++.+.+...|+++-++.
T Consensus       137 ~gktvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~-~~~~~~~g~~~~-----~~l~ell~~aDvV~l~lP  202 (525)
T TIGR01327       137 YGKTLGVIG-LGRIGSIVAKRAKAF-GMKVLAYDPYIS-PERAEQLGVELV-----DDLDELLARADFITVHTP  202 (525)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCC-hhHHHhcCCEEc-----CCHHHHHhhCCEEEEccC
Confidence            578999999 999999999999988 999888876422 222344443211     123344455666665544

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=91.13  E-value=3.2  Score=35.02  Aligned_cols=99  Identities=21%  Similarity=0.283  Sum_probs=60.7

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC--CcEEEEeCCcccHHHHHHcCC----C---EEEeCCCCChhhhcc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG--ASHVVATTSTPKVEFVKELGA----D---KVIDYRKTKYEDIEE  211 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g--~~~v~~~~~~~~~~~~~~~g~----~---~v~~~~~~~~~~~~~  211 (327)
                      +......++.+|+-+| ||. |..+..+++.. +  .+++.++.++...+.+++.-.    .   .++..+..+......
T Consensus        44 ~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~  120 (239)
T PRK00216         44 IKWLGVRPGDKVLDLA-CGT-GDLAIALAKAV-GKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDAEALPFPDN  120 (239)
T ss_pred             HHHhCCCCCCeEEEeC-CCC-CHHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecccccCCCCCC
Confidence            3445566788999998 777 77888888875 4  678888888877777755311    1   111111111111123


Q ss_pred             CccEEEeCCC-----C----chhhhhhhcCCCcEEEeeCC
Q 020320          212 KFDVLYDTIG-----D----CKNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       212 ~~d~v~d~~g-----~----~~~~~~~l~~~g~~v~~g~~  242 (327)
                      .+|+++....     .    ...+...|+++|.++.....
T Consensus       121 ~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~~  160 (239)
T PRK00216        121 SFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEFS  160 (239)
T ss_pred             CccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEec
Confidence            5888874322     1    14566889999998876543

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.09  E-value=2.3  Score=37.23  Aligned_cols=95  Identities=21%  Similarity=0.289  Sum_probs=63.9

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++....+..++..+. -.|++++|.|.++.+|.-.+.++... |+.+.+. .+                  +..+..
T Consensus       137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~-gatVtv~-~s------------------~t~~l~  196 (284)
T PRK14179        137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDK-NATVTLT-HS------------------RTRNLA  196 (284)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHC-CCEEEEE-CC------------------CCCCHH
Confidence            345555445555555444 57999999998899998888888776 7766654 11                  111334


Q ss_pred             hhccCccEEEeCCCCchhh-hhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCKNS-FVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~~~-~~~l~~~g~~v~~g~~~  243 (327)
                      ...+.+|+++-++|..+.. -..++++..++.+|...
T Consensus       197 ~~~~~ADIVI~avg~~~~v~~~~ik~GavVIDvgin~  233 (284)
T PRK14179        197 EVARKADILVVAIGRGHFVTKEFVKEGAVVIDVGMNR  233 (284)
T ss_pred             HHHhhCCEEEEecCccccCCHHHccCCcEEEEeccee
Confidence            4556789999999865222 23488888888888654

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=91.07  E-value=0.81  Score=44.86  Aligned_cols=88  Identities=17%  Similarity=0.140  Sum_probs=63.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh--h--hccCccEEEeCCCCch
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE--D--IEEKFDVLYDTIGDCK  224 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--~--~~~~~d~v~d~~g~~~  224 (327)
                      .++++|.| .|.+|+..++.++.. |.++++++.++++.+.+++.|...+. .+..+..  +  ..+++|.++-+.+...
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~~g~~v~~-GDat~~~~L~~agi~~A~~vv~~~~d~~  476 (601)
T PRK03659        400 KPQVIIVG-FGRFGQVIGRLLMAN-KMRITVLERDISAVNLMRKYGYKVYY-GDATQLELLRAAGAEKAEAIVITCNEPE  476 (601)
T ss_pred             cCCEEEec-CchHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHhCCCeEEE-eeCCCHHHHHhcCCccCCEEEEEeCCHH
Confidence            36899999 999999999999987 99999999999999999998865433 3333222  2  2357899998888542


Q ss_pred             h------hhhhhcCCCcEEEe
Q 020320          225 N------SFVVAKDNAPIVDI  239 (327)
Q Consensus       225 ~------~~~~l~~~g~~v~~  239 (327)
                      .      ..+...|..+++..
T Consensus       477 ~n~~i~~~~r~~~p~~~IiaR  497 (601)
T PRK03659        477 DTMKIVELCQQHFPHLHILAR  497 (601)
T ss_pred             HHHHHHHHHHHHCCCCeEEEE
Confidence            1      23445666666654

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=91.06  E-value=0.76  Score=41.56  Aligned_cols=72  Identities=14%  Similarity=0.059  Sum_probs=43.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc-CCCEEE-eCC-C-CChhhhccCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL-GADKVI-DYR-K-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~-g~~~v~-~~~-~-~~~~~~~~~~d~v~d~~g  221 (327)
                      .+|||+||+|-+|...+..+...+|.++++++++..+....... +...+. |-. + ..+.....++|+||.+++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa   77 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA   77 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence            36999999999999988887654357888877655433322111 122111 211 1 112233468999998764

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.03  E-value=2.8  Score=36.82  Aligned_cols=98  Identities=14%  Similarity=0.155  Sum_probs=64.8

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEe-CCCCCh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID-YRKTKY  206 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~-~~~~~~  206 (327)
                      +.|++....+..++..++ -.|++++|.|.+..+|.=...++... +..                .+++..++ ++..+.
T Consensus       136 ~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~-~~~----------------~~aTVtvchs~T~nl  198 (293)
T PRK14185        136 FVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQK-AYP----------------GDCTVTVCHSRSKNL  198 (293)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcC-CCC----------------CCCEEEEecCCCCCH
Confidence            345555445555555554 47999999999999999888888765 310                12222222 222344


Q ss_pred             hhhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          207 EDIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       207 ~~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ....+.+|+++-++|..+ -.-..++++..++.+|...
T Consensus       199 ~~~~~~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~  236 (293)
T PRK14185        199 KKECLEADIIIAALGQPEFVKADMVKEGAVVIDVGTTR  236 (293)
T ss_pred             HHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecCcc
Confidence            445567999999999763 3346788999999998754

>PRK05599 hypothetical protein; Provisional

Probab=91.03  E-value=1.6  Score=37.36  Aligned_cols=38  Identities=21%  Similarity=0.352  Sum_probs=30.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      +++|+||++++|.+.+..+. . |.+++++.+++++.+.+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~-g~~Vil~~r~~~~~~~~   39 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-H-GEDVVLAARRPEAAQGL   39 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHH
Confidence            68999999999999887765 5 88888888877765433

>PRK08219 short chain dehydrogenase; Provisional

Probab=91.01  E-value=1.6  Score=36.46  Aligned_cols=71  Identities=17%  Similarity=0.246  Sum_probs=44.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhh---hc---cCccEEEeCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVIDYRKTKYED---IE---EKFDVLYDTIG  221 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~---~~---~~~d~v~d~~g  221 (327)
                      .++++|+||+|.+|..++..+...  .+++++.+++++.+.+.+ ...-.++..+-.+...   ..   .++|.++.++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   80 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT--HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG   80 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh--CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            357999999999999988777654  678888887666544432 2111222222222221   12   26899999887

>PRK05855 short chain dehydrogenase; Validated

Probab=90.99  E-value=1.2  Score=43.17  Aligned_cols=74  Identities=16%  Similarity=0.238  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCE-EEeCCCCChhh---h-------cc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADK-VIDYRKTKYED---I-------EE  211 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~---~-------~~  211 (327)
                      ..+.++||+||+|++|.+.+..+... |.+++++.++.++.+.+    ++.|... .+..+-.+...   .       ..
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFARE-GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            34678999999999999988777777 99988888877655433    2234322 12111111111   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       392 ~id~lv~~Ag  401 (582)
T PRK05855        392 VPDIVVNNAG  401 (582)
T ss_pred             CCcEEEECCc
Confidence            6899999987

>PLN02206 UDP-glucuronate decarboxylase

Probab=90.97  E-value=0.89  Score=42.77  Aligned_cols=71  Identities=24%  Similarity=0.302  Sum_probs=44.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cHHHH-HHcC---CCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFV-KELG---ADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~~~~-~~~g---~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      ..+.+|||+||+|-+|..++..+... |.+++++++... +.+.. ..+.   .+. ++.+  .......++|.||.+++
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~-G~~V~~ld~~~~~~~~~~~~~~~~~~~~~-i~~D--~~~~~l~~~D~ViHlAa  192 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMAR-GDSVIVVDNFFTGRKENVMHHFSNPNFEL-IRHD--VVEPILLEVDQIYHLAC  192 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHC-cCEEEEEeCCCccchhhhhhhccCCceEE-EECC--ccChhhcCCCEEEEeee
Confidence            35689999999999999999988887 888888765322 11111 1121   221 1111  11123357899998875

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.92  E-value=0.58  Score=39.65  Aligned_cols=40  Identities=18%  Similarity=0.317  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      .+.+++|+|++|.+|...+..+... |.+++++.+++++.+
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~-G~~Vi~~~r~~~~~~   45 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKE-GVNVGLLARTEENLK   45 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence            3578999999999999988877777 888888888766543

>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]

Probab=90.88  E-value=1.3  Score=39.78  Aligned_cols=88  Identities=20%  Similarity=0.280  Sum_probs=64.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      +-+|+.++|.| -|-+|.-+++.++.+ |++++++...|-+.-.+..=|.. |..     +.+...-.|+++-++|..  
T Consensus       206 liaGK~vVV~G-YG~vGrG~A~~~rg~-GA~ViVtEvDPI~AleA~MdGf~-V~~-----m~~Aa~~gDifiT~TGnkdV  277 (420)
T COG0499         206 LLAGKNVVVAG-YGWVGRGIAMRLRGM-GARVIVTEVDPIRALEAAMDGFR-VMT-----MEEAAKTGDIFVTATGNKDV  277 (420)
T ss_pred             eecCceEEEec-ccccchHHHHHhhcC-CCeEEEEecCchHHHHHhhcCcE-EEE-----hHHhhhcCCEEEEccCCcCc
Confidence            56899999999 999999999999999 99999988877765555444544 322     233344568888888853  


Q ss_pred             --hhhhhhhcCCCcEEEeeC
Q 020320          224 --KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       224 --~~~~~~l~~~g~~v~~g~  241 (327)
                        ...+..++++..+...|.
T Consensus       278 i~~eh~~~MkDgaIl~N~GH  297 (420)
T COG0499         278 IRKEHFEKMKDGAILANAGH  297 (420)
T ss_pred             cCHHHHHhccCCeEEecccc
Confidence              455667777777766663

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=90.83  E-value=1.1  Score=42.10  Aligned_cols=72  Identities=22%  Similarity=0.258  Sum_probs=44.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cHHHHHH-cCC--CEEEeCCCCChhhhccCccEEEeCCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKE-LGA--DKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~~~~~~-~g~--~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      ++..+|+|+||+|-+|..++..+... |.+++++++... +...... .+.  ...+..+  .......++|+||.+++
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~-G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~D--i~~~~~~~~D~ViHlAa  193 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGR-GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHD--VVEPILLEVDQIYHLAC  193 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCccHhHhhhhccCCceEEEECc--cccccccCCCEEEECce
Confidence            45678999999999999999988887 888888875422 2221111 111  1112211  11122357999999875

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=90.81  E-value=2.2  Score=35.50  Aligned_cols=87  Identities=16%  Similarity=0.176  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-c-HHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-K-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~-~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      .|.+|+|.| +|.+|...+..+... |+++.++..... . .+++.+ + ...+..... ....+.++|+|+-+++..  
T Consensus         9 ~~k~vLVIG-gG~va~~ka~~Ll~~-ga~V~VIs~~~~~~l~~l~~~-~-~i~~~~~~~-~~~~l~~adlViaaT~d~el   83 (202)
T PRK06718          9 SNKRVVIVG-GGKVAGRRAITLLKY-GAHIVVISPELTENLVKLVEE-G-KIRWKQKEF-EPSDIVDAFLVIAATNDPRV   83 (202)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEcCCCCHHHHHHHhC-C-CEEEEecCC-ChhhcCCceEEEEcCCCHHH
Confidence            568999999 799999887777666 777776654321 1 122222 2 111211111 122356899999998854  


Q ss_pred             hhhhhhhcCCCcEEEe
Q 020320          224 KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 ~~~~~~l~~~g~~v~~  239 (327)
                      +..+...+..+.++..
T Consensus        84 N~~i~~~a~~~~lvn~   99 (202)
T PRK06718         84 NEQVKEDLPENALFNV   99 (202)
T ss_pred             HHHHHHHHHhCCcEEE
Confidence            4444333233444443

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=90.80  E-value=3.5  Score=34.30  Aligned_cols=88  Identities=20%  Similarity=0.214  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--h
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--K  224 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--~  224 (327)
                      .|.+|+|.| .|.+|..-+..+... |+++.++..... ....+.+.| ...+...+.. ...+.++++|+-+.+..  +
T Consensus         8 ~gk~vlVvG-gG~va~rk~~~Ll~~-ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~~~~-~~dl~~~~lVi~at~d~~ln   83 (205)
T TIGR01470         8 EGRAVLVVG-GGDVALRKARLLLKA-GAQLRVIAEELESELTLLAEQG-GITWLARCFD-ADILEGAFLVIAATDDEELN   83 (205)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHC-CCEEEEEcCCCCHHHHHHHHcC-CEEEEeCCCC-HHHhCCcEEEEECCCCHHHH
Confidence            467999999 899999988888877 888877764332 222233333 1122222222 23457899999998853  3


Q ss_pred             -hhhhhhcCCCcEEEe
Q 020320          225 -NSFVVAKDNAPIVDI  239 (327)
Q Consensus       225 -~~~~~l~~~g~~v~~  239 (327)
                       ......+..|..+..
T Consensus        84 ~~i~~~a~~~~ilvn~   99 (205)
T TIGR01470        84 RRVAHAARARGVPVNV   99 (205)
T ss_pred             HHHHHHHHHcCCEEEE
Confidence             333344455555543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=90.78  E-value=0.55  Score=41.88  Aligned_cols=43  Identities=21%  Similarity=0.278  Sum_probs=36.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      -.+.+++|+|+++++|..++..+... |++++.+.++.++.+.+
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~-Ga~Vv~~~R~~~~~~~~   75 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALR-GAHVVLACRNEERGEEA   75 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence            45689999999999999999888888 89999999988655444

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=90.70  E-value=3.5  Score=36.97  Aligned_cols=92  Identities=15%  Similarity=0.152  Sum_probs=53.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhc---CCcEEEEeC--CcccHHHHHHcCCC--------------EEEeC------CCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFY---GASHVVATT--STPKVEFVKELGAD--------------KVIDY------RKTK  205 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~---g~~~v~~~~--~~~~~~~~~~~g~~--------------~v~~~------~~~~  205 (327)
                      +|.|.| .|.+|....+++....   ..+++.+-.  +.+...++.++.-.              .+++.      .+.+
T Consensus         1 ~IaInG-fGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAING-FGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEEC-CCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            477999 6999999988877641   144444332  33333444443210              01111      0011


Q ss_pred             hhhh---ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          206 YEDI---EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       206 ~~~~---~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ..+.   ..++|+||+|+|..   ..+...+..|++.+..+.+.
T Consensus        80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~  123 (325)
T TIGR01532        80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPG  123 (325)
T ss_pred             hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCCC
Confidence            1111   13899999999954   66778888888999888664

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=90.68  E-value=0.72  Score=39.85  Aligned_cols=69  Identities=19%  Similarity=0.192  Sum_probs=50.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEe-CCC-CChhhhccCccEEEeCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID-YRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~-~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      +|||+||+|-+|..++..+... |.++.+..+++++..... .+.+.+.. ..+ ..+.....|++.++-..+
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~-~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~   72 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLAR-GHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISG   72 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhC-CCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEec
Confidence            6899999999999999999988 999999999988877766 55554432 222 223334467888776555

>PRK07985 oxidoreductase; Provisional

Probab=90.66  E-value=1.8  Score=38.23  Aligned_cols=35  Identities=17%  Similarity=0.322  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .+++++|+||++++|.++++.+... |+++++..++
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~-G~~Vi~~~~~   82 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYARE-GADVAISYLP   82 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEecCC
Confidence            5679999999999999988888877 9988876543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=90.58  E-value=0.53  Score=40.61  Aligned_cols=65  Identities=20%  Similarity=0.259  Sum_probs=45.1

Q ss_pred             EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhcc-CccEEEeCCCC
Q 020320          152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE-KFDVLYDTIGD  222 (327)
Q Consensus       152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~d~v~d~~g~  222 (327)
                      |+|.||+|-+|.+.+..++.. |-.+++.++++.+.+.-......     ..+...+... ++|+|++-+|.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~-gh~v~iltR~~~~~~~~~~~~v~-----~~~~~~~~~~~~~DavINLAG~   66 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKG-GHQVTILTRRPPKASQNLHPNVT-----LWEGLADALTLGIDAVINLAGE   66 (297)
T ss_pred             CeEeccccchhHHHHHHHHhC-CCeEEEEEcCCcchhhhcCcccc-----ccchhhhcccCCCCEEEECCCC
Confidence            589999999999999999887 88899999887765543222111     1112222233 69999999983

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.58  E-value=2.7  Score=36.89  Aligned_cols=95  Identities=18%  Similarity=0.219  Sum_probs=63.5

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHh----hcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKH----FYGASHVVATTSTPKVEFVKELGADKVIDYRK  203 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~----~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~  203 (327)
                      ++|++....+..++..++ -.|++++|.|.+..+|.=...++..    . ++.+.+.-..                   .
T Consensus       136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~-~AtVt~~hs~-------------------t  195 (286)
T PRK14184        136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFA-NATVTVCHSR-------------------T  195 (286)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccC-CCEEEEEeCC-------------------c
Confidence            346655555555655543 4689999999999999888888876    4 5555443322                   1


Q ss_pred             CChhhhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          204 TKYEDIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       204 ~~~~~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      .+.....+.+|+++-++|... -.-..++++..++.+|...
T Consensus       196 ~~l~~~~~~ADIVI~AvG~p~li~~~~vk~GavVIDVGi~~  236 (286)
T PRK14184        196 PDLAEECREADFLFVAIGRPRFVTADMVKPGAVVVDVGINR  236 (286)
T ss_pred             hhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeeec
Confidence            233444567889999998652 2335668888888888654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.57  E-value=1.8  Score=38.38  Aligned_cols=35  Identities=26%  Similarity=0.420  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .+++++|+|+++++|.+.+..+... |+++++..++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~-Ga~Vv~~~~~   45 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARL-GATVVVNDVA   45 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCC
Confidence            4689999999999999988777777 8888887753

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=90.56  E-value=1.8  Score=34.37  Aligned_cols=70  Identities=19%  Similarity=0.163  Sum_probs=43.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  223 (327)
                      .|.+|+|.| +|.+|..-++.+... |+++.++  +++..+.+.+++.-. +..... ....+.++|+|+-+++..
T Consensus        12 ~~~~vlVvG-GG~va~rka~~Ll~~-ga~V~VI--sp~~~~~l~~l~~i~-~~~~~~-~~~dl~~a~lViaaT~d~   81 (157)
T PRK06719         12 HNKVVVIIG-GGKIAYRKASGLKDT-GAFVTVV--SPEICKEMKELPYIT-WKQKTF-SNDDIKDAHLIYAATNQH   81 (157)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEE--cCccCHHHHhccCcE-EEeccc-ChhcCCCceEEEECCCCH
Confidence            578999999 799998877766666 8877766  344434444454211 221111 122356899999998753

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=90.54  E-value=1.5  Score=39.40  Aligned_cols=32  Identities=31%  Similarity=0.487  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT  182 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~  182 (327)
                      |+++-|+| .|.+|..+++.++.+ |.++++.+.
T Consensus       142 gkTvGIiG-~G~IG~~va~~l~af-gm~v~~~d~  173 (324)
T COG0111         142 GKTVGIIG-LGRIGRAVAKRLKAF-GMKVIGYDP  173 (324)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC-CCeEEEECC
Confidence            88999999 999999999999998 999999997

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=90.47  E-value=3.7  Score=35.10  Aligned_cols=99  Identities=15%  Similarity=0.160  Sum_probs=64.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHH----HcCCCEEEeCCCCChhhhc--cC
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVK----ELGADKVIDYRKTKYEDIE--EK  212 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~--~~  212 (327)
                      .+...++.+|++|+=.|  .+.|-+++.+|+..+. -+++.....++..+.|+    ++|....+.....|..+..  ..
T Consensus        86 I~~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~  163 (256)
T COG2519          86 IVARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEED  163 (256)
T ss_pred             HHHHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccc
Confidence            44678999999998876  4568888899988844 36666667777666663    3454332211112222211  26


Q ss_pred             ccEEE-eCCC---CchhhhhhhcCCCcEEEee
Q 020320          213 FDVLY-DTIG---DCKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       213 ~d~v~-d~~g---~~~~~~~~l~~~g~~v~~g  240 (327)
                      +|.+| |.-.   .+..+...|+++|.++.+.
T Consensus       164 vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~  195 (256)
T COG2519         164 VDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS  195 (256)
T ss_pred             cCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence            88887 5543   2377889999999988873

>PLN03013 cysteine synthase

Probab=90.43  E-value=2  Score=40.06  Aligned_cols=58  Identities=17%  Similarity=0.305  Sum_probs=47.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---CcccHHHHHHcCCCEEEe
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---STPKVEFVKELGADKVID  200 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---~~~~~~~~~~~g~~~v~~  200 (327)
                      +...+.+|...+|...+|..|++.+.+++.+ |.+.++++.   ++++.+.++.+|++.++.
T Consensus       167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~-G~~~~VvvP~~~s~~K~~~ira~GAeVi~v  227 (429)
T PLN03013        167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASR-GYRLILTMPASMSMERRVLLKAFGAELVLT  227 (429)
T ss_pred             HcCCcCCCCcEEEEECCcHHHHHHHHHHHHc-CCCEEEEECCCCcHHHHHHHHHcCCEEEEE
Confidence            4566788877777777999999999999998 999888873   566888889999887654

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=90.41  E-value=1.8  Score=40.71  Aligned_cols=69  Identities=25%  Similarity=0.431  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-ccH----HHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKV----EFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-~~~----~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      .+++++|+| .|.+|+.++..+... |+++.+.+.++ +..    +.+.+.|..... .+..+  ....++|+|+.+.|
T Consensus         4 ~~k~v~iiG-~g~~G~~~A~~l~~~-G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~d~vv~~~g   77 (450)
T PRK14106          4 KGKKVLVVG-AGVSGLALAKFLKKL-GAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE--EFLEGVDLVVVSPG   77 (450)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch--hHhhcCCEEEECCC
Confidence            468899999 666999999999888 99988888654 222    223344554322 22111  23457999999888

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=90.36  E-value=1.7  Score=36.97  Aligned_cols=36  Identities=25%  Similarity=0.381  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .++++||+|++|.+|...+..+... |.++++..++.
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~-G~~v~~~~~~~   42 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEA-GAKVIGFDQAF   42 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecch
Confidence            4689999999999999988887777 89988888765

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=90.29  E-value=0.78  Score=38.08  Aligned_cols=67  Identities=22%  Similarity=0.221  Sum_probs=45.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~  220 (327)
                      -.|++++|.| .|.+|..+++.+... |.++++.+.++++.+.+ +.+++.. ++.. . +.  ....|+++-+.
T Consensus        26 l~gk~v~I~G-~G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~-~-l~--~~~~Dv~vp~A   93 (200)
T cd01075          26 LEGKTVAVQG-LGKVGYKLAEHLLEE-GAKLIVADINEEAVARAAELFGATV-VAPE-E-IY--SVDADVFAPCA   93 (200)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHcCCEE-Ecch-h-hc--cccCCEEEecc
Confidence            4678999999 899999999999988 99999888877765554 4456532 2221 1 11  12577777543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06141 ornithine cyclodeaminase; Validated

Probab=90.24  E-value=4.7  Score=36.05  Aligned_cols=96  Identities=17%  Similarity=0.097  Sum_probs=57.3

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHH-HHHHc---CCCEEEeCCCCChhhhccCccEEE
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVE-FVKEL---GADKVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~-~~~~~---g~~~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      ........+++|+| +|..|.+.+..+....+ .++.+..+++++.+ +++++   |.....   ..+..+...++|+|+
T Consensus       119 ~La~~~~~~v~iiG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~---~~~~~~av~~aDIVi  194 (314)
T PRK06141        119 YLARKDASRLLVVG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV---VTDLEAAVRQADIIS  194 (314)
T ss_pred             HhCCCCCceEEEEC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE---eCCHHHHHhcCCEEE
Confidence            33345678999999 89999888764444225 45666667777644 34444   322221   123344567899999


Q ss_pred             eCCCCchhh--hhhhcCCCcEEEeeCC
Q 020320          218 DTIGDCKNS--FVVAKDNAPIVDITWP  242 (327)
Q Consensus       218 d~~g~~~~~--~~~l~~~g~~v~~g~~  242 (327)
                      .++.+....  ...++++-.+..+|..
T Consensus       195 ~aT~s~~pvl~~~~l~~g~~i~~ig~~  221 (314)
T PRK06141        195 CATLSTEPLVRGEWLKPGTHLDLVGNF  221 (314)
T ss_pred             EeeCCCCCEecHHHcCCCCEEEeeCCC
Confidence            887754222  2567777655555543

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=90.24  E-value=1.5  Score=40.10  Aligned_cols=90  Identities=16%  Similarity=0.200  Sum_probs=56.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEe--CCccc-HHHHHHcCCCEEEeCCCCChh------------------
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFY-GASHVVAT--TSTPK-VEFVKELGADKVIDYRKTKYE------------------  207 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~--~~~~~-~~~~~~~g~~~v~~~~~~~~~------------------  207 (327)
                      ++|.|+|++|.+|..++.+.+... ..++++.+  .+.++ .+.+++++...+.-.++....                  
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            579999999999999998887653 34566555  23333 345577887766543321110                  


Q ss_pred             ---hhc--cCccEEEeCCC---CchhhhhhhcCCCcEEEe
Q 020320          208 ---DIE--EKFDVLYDTIG---DCKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       208 ---~~~--~~~d~v~d~~g---~~~~~~~~l~~~g~~v~~  239 (327)
                         +..  ..+|+|+.+.+   +...++.+++.|.++..-
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA  121 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA  121 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence               001  25899998875   336677777777665543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=90.23  E-value=0.71  Score=39.89  Aligned_cols=73  Identities=22%  Similarity=0.291  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-EeCCCCChhh----------hccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-IDYRKTKYED----------IEEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~----------~~~~  212 (327)
                      .+++++|+|+++.+|..++..+... |.++++..+++++.+.+    ++.+.... +..+-.+..+          ....
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKA-GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            5689999999999999888877777 89988888776654333    22343321 2111122111          1146


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|.++.+.|
T Consensus        88 id~li~~ag   96 (265)
T PRK07097         88 IDILVNNAG   96 (265)
T ss_pred             CCEEEECCC
Confidence            899999887

>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]

Probab=90.21  E-value=2.9  Score=38.09  Aligned_cols=76  Identities=24%  Similarity=0.374  Sum_probs=43.3

Q ss_pred             HhcCCCCCCEEEEE-cCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCE--EEeCCCCChhhhcc---
Q 020320          142 KTAGFKTGQTIFIV-GGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADK--VIDYRKTKYEDIEE---  211 (327)
Q Consensus       142 ~~~~~~~~~~vlI~-ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~--v~~~~~~~~~~~~~---  211 (327)
                      ....+++|++||=. .|.|+--...+++++.. |..+++.+.++.|...+    +.+|...  ++..+...+.....   
T Consensus       150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~-~~iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~~~~~~~  228 (355)
T COG0144         150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENE-GAIVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAELLPGGE  228 (355)
T ss_pred             HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCC-CceEEEEcCCHHHHHHHHHHHHHcCCCceEEEecccccccccccccC
Confidence            46788999877533 33444444444444433 44567888888887666    4588774  33333322222221   


Q ss_pred             CccEEE-e
Q 020320          212 KFDVLY-D  218 (327)
Q Consensus       212 ~~d~v~-d  218 (327)
                      .+|.++ |
T Consensus       229 ~fD~iLlD  236 (355)
T COG0144         229 KFDRILLD  236 (355)
T ss_pred             cCcEEEEC
Confidence            378887 5

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=90.19  E-value=1.1  Score=39.05  Aligned_cols=73  Identities=12%  Similarity=0.150  Sum_probs=47.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEE
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      +++..+...+++++|+| +|+.+.+++..++.+ |+. +.++.+++++.+.+ +.++.+.    . ...  ....+|+++
T Consensus       113 ~L~~~~~~~~~~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~~a~~la~~~~~~~----~-~~~--~~~~~dlvI  183 (272)
T PRK12550        113 LLASYQVPPDLVVALRG-SGGMAKAVAAALRDA-GFTDGTIVARNEKTGKALAELYGYEW----R-PDL--GGIEADILV  183 (272)
T ss_pred             HHHhcCCCCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhCCcc----h-hhc--ccccCCEEE
Confidence            34444445567999999 899999999888888 765 66666777765444 4454221    0 001  123589999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      +|+.
T Consensus       184 NaTp  187 (272)
T PRK12550        184 NVTP  187 (272)
T ss_pred             ECCc
Confidence            9874

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=90.11  E-value=2.3  Score=36.13  Aligned_cols=34  Identities=26%  Similarity=0.481  Sum_probs=28.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT  182 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~  182 (327)
                      .+++++|+|++|.+|...+..+... |.++++..+
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~-g~~v~~~~~   38 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQE-GAKVVINYN   38 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEcC
Confidence            4689999999999999988877777 888876553

>PRK07102 short chain dehydrogenase; Provisional

Probab=90.10  E-value=0.69  Score=39.35  Aligned_cols=38  Identities=18%  Similarity=0.321  Sum_probs=32.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      ++++|+||+|.+|...+..+... |.+++++.+++++.+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~-G~~Vi~~~r~~~~~~   39 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAA-GARLYLAARDVERLE   39 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHH
Confidence            57999999999999988888877 899888888776543

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.02  E-value=4  Score=35.79  Aligned_cols=98  Identities=20%  Similarity=0.179  Sum_probs=63.9

Q ss_pred             ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCCh
Q 020320          129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTKY  206 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~~  206 (327)
                      ++|++....+..++..+ --.|++++|.|.+..+|.=.+.++... |+.+                +++..+ +++..+.
T Consensus       132 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~~~~----------------~AtVtvchs~T~~l  194 (287)
T PRK14181        132 FIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQK-HPDT----------------NATVTLLHSQSENL  194 (287)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhC-cCCC----------------CCEEEEeCCCCCCH
Confidence            44555544555555544 346999999999999998888888765 3210                111111 1222344


Q ss_pred             hhhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          207 EDIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       207 ~~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ....+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       195 ~~~~~~ADIvV~AvG~p~~i~~~~ik~GavVIDvGin~  232 (287)
T PRK14181        195 TEILKTADIIIAAIGVPLFIKEEMIAEKAVIVDVGTSR  232 (287)
T ss_pred             HHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccc
Confidence            555678999999999763 3446788999999998654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=90.02  E-value=1.7  Score=37.56  Aligned_cols=32  Identities=16%  Similarity=0.210  Sum_probs=27.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT  182 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~  182 (327)
                      .+++|+||++++|.+.++.+... |++++++.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~-G~~V~~~~~   33 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQE-GYRVVLHYH   33 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhC-CCeEEEEcC
Confidence            57899999999999988888877 898887764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=89.98  E-value=2.9  Score=36.29  Aligned_cols=100  Identities=16%  Similarity=0.175  Sum_probs=61.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHHc-C------CCE--EEeCCCCChhhhcc
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKEL-G------ADK--VIDYRKTKYEDIEE  211 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~~-g------~~~--v~~~~~~~~~~~~~  211 (327)
                      +..++.++++||=+| ||. |..+..+++..+ ..+++.++.+++..+.+++- .      .+.  .+..+...+.....
T Consensus        67 ~~~~~~~~~~VLDlG-cGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~~  144 (261)
T PLN02233         67 SWSGAKMGDRVLDLC-CGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDDC  144 (261)
T ss_pred             HHhCCCCCCEEEEEC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCCC
Confidence            456778899999988 554 445666777652 24788888999888777532 1      111  12222122111123


Q ss_pred             CccEEEeCCC-----C----chhhhhhhcCCCcEEEeeCCC
Q 020320          212 KFDVLYDTIG-----D----CKNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       212 ~~d~v~d~~g-----~----~~~~~~~l~~~g~~v~~g~~~  243 (327)
                      .+|.|+-..+     .    ...+.+.|+|||+++......
T Consensus       145 sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~  185 (261)
T PLN02233        145 YFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK  185 (261)
T ss_pred             CEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence            5888875443     1    255778999999998886543

>PRK06523 short chain dehydrogenase; Provisional

Probab=89.97  E-value=0.56  Score=40.34  Aligned_cols=37  Identities=27%  Similarity=0.519  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .++++||+|++|.+|...++.+... |.+++++.++++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~r~~~   44 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEA-GARVVTTARSRP   44 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHC-CCEEEEEeCChh
Confidence            5789999999999999988888877 999888887654

>PRK12746 short chain dehydrogenase; Provisional

Probab=89.95  E-value=1.9  Score=36.79  Aligned_cols=39  Identities=15%  Similarity=0.302  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKV  187 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~  187 (327)
                      .+.+++|+|++|.+|...+..+... |.++++. .++.++.
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~-G~~v~i~~~r~~~~~   44 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLAND-GALVAIHYGRNKQAA   44 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHH
Confidence            3578999999999999998888777 8887665 3555443

>PRK07023 short chain dehydrogenase; Provisional

Probab=89.87  E-value=1.4  Score=37.36  Aligned_cols=35  Identities=14%  Similarity=0.213  Sum_probs=29.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      +++|+|++|.+|..++..+... |.+++++.++.++
T Consensus         3 ~vlItGasggiG~~ia~~l~~~-G~~v~~~~r~~~~   37 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQP-GIAVLGVARSRHP   37 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhC-CCEEEEEecCcch
Confidence            6899999999999988888777 8998888876543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=89.85  E-value=2.4  Score=36.24  Aligned_cols=34  Identities=15%  Similarity=0.298  Sum_probs=29.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      ++++|+|++|.+|..++..+... |.+++++.++.
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~-g~~vi~~~r~~   36 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAA-GFDLAINDRPD   36 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecCc
Confidence            57999999999999988888877 88888887643

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=89.83  E-value=0.36  Score=36.69  Aligned_cols=91  Identities=19%  Similarity=0.141  Sum_probs=47.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc----cHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC--ch
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP----KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD--CK  224 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~--~~  224 (327)
                      +|.|+|.+|.+|.+.++.+....+.+.+.+.....    ..+..+-.|....-....+++......+|+++|++..  ..
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT~p~~~~   81 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFTNPDAVY   81 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES-HHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcCChHHhH
Confidence            68999977999999999999865777776664332    1111121221110001113445555669999999842  12


Q ss_pred             hhhhhhcCCCcEEEeeC
Q 020320          225 NSFVVAKDNAPIVDITW  241 (327)
Q Consensus       225 ~~~~~l~~~g~~v~~g~  241 (327)
                      ..++.....|.-+.+|.
T Consensus        82 ~~~~~~~~~g~~~ViGT   98 (124)
T PF01113_consen   82 DNLEYALKHGVPLVIGT   98 (124)
T ss_dssp             HHHHHHHHHT-EEEEE-
T ss_pred             HHHHHHHhCCCCEEEEC
Confidence            23333333344444543

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN02306 hydroxypyruvate reductase

Probab=89.82  E-value=1.7  Score=40.08  Aligned_cols=91  Identities=23%  Similarity=0.287  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-hhcCCcEEEEeCCccc-HH-HHHHcCCC-------EEEeCCCCChhhhccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAK-HFYGASHVVATTSTPK-VE-FVKELGAD-------KVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~-~~~g~~~v~~~~~~~~-~~-~~~~~g~~-------~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      .|+++.|+| .|.+|..+++.++ .+ |.++++.++.... .. ....++..       ..-.....++.+.+...|+++
T Consensus       164 ~gktvGIiG-~G~IG~~vA~~l~~~f-Gm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV~  241 (386)
T PLN02306        164 KGQTVGVIG-AGRIGSAYARMMVEGF-KMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVIS  241 (386)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcC-CCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEEE
Confidence            478999999 9999999999985 66 9999988865432 11 11223211       000001134566667889988


Q ss_pred             eCCCCc--------hhhhhhhcCCCcEEEee
Q 020320          218 DTIGDC--------KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       218 d~~g~~--------~~~~~~l~~~g~~v~~g  240 (327)
                      -+....        ...+..|+++..++.++
T Consensus       242 lh~Plt~~T~~lin~~~l~~MK~ga~lIN~a  272 (386)
T PLN02306        242 LHPVLDKTTYHLINKERLALMKKEAVLVNAS  272 (386)
T ss_pred             EeCCCChhhhhhcCHHHHHhCCCCeEEEECC
Confidence            765421        45678888888888775

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=89.82  E-value=1.1  Score=38.78  Aligned_cols=70  Identities=16%  Similarity=0.152  Sum_probs=48.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC--CChhhhc--cCccEEEeCCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK--TKYEDIE--EKFDVLYDTIGD  222 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~--~~~d~v~d~~g~  222 (327)
                      +|||+||+|- |...+..+... |.++++.+.++...+.+...|...+....-  ..+...+  .++|+++|++-.
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~-g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQ-GIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhC-CCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence            6999997775 88888777666 888999998888777777666555542221  1222222  468999999873

This enzyme was found to be a monomer by gel filtration.

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=89.81  E-value=7.4  Score=34.99  Aligned_cols=94  Identities=14%  Similarity=0.091  Sum_probs=58.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHH-HHHHc----CCCEEEeCCCCChhhhccCccEEEeC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVE-FVKEL----GADKVIDYRKTKYEDIEEKFDVLYDT  219 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~-~~~~~----g~~~v~~~~~~~~~~~~~~~d~v~d~  219 (327)
                      .....+++|+| +|..+.+.+..+....+.+ +.+..+++++.+ +++++    |.+...   ..+......++|+|+.+
T Consensus       126 ~~~~~~v~iiG-aG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~---~~~~~~av~~aDiVvta  201 (326)
T TIGR02992       126 REDSSVVAIFG-AGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTA---ATDPRAAMSGADIIVTT  201 (326)
T ss_pred             CCCCcEEEEEC-CCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEE---eCCHHHHhccCCEEEEe
Confidence            34567899999 8999988777776432655 445557766644 33433    433221   12344556789999999


Q ss_pred             CCCchhh--hhhhcCCCcEEEeeCCC
Q 020320          220 IGDCKNS--FVVAKDNAPIVDITWPP  243 (327)
Q Consensus       220 ~g~~~~~--~~~l~~~g~~v~~g~~~  243 (327)
                      +.+....  ...++++-.+..+|...
T Consensus       202 T~s~~p~i~~~~l~~g~~i~~vg~~~  227 (326)
T TIGR02992       202 TPSETPILHAEWLEPGQHVTAMGSDA  227 (326)
T ss_pred             cCCCCcEecHHHcCCCcEEEeeCCCC
Confidence            8754222  24677777777777543

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK09134 short chain dehydrogenase; Provisional

Probab=89.79  E-value=2.5  Score=36.20  Aligned_cols=35  Identities=14%  Similarity=0.186  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .+++++|+||+|.+|..++..+... |.+++++.+.
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~-g~~v~~~~~~   42 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAH-GFDVAVHYNR   42 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCC
Confidence            4678999999999999988877777 8888877653

>PRK07201 short chain dehydrogenase; Provisional

Probab=89.75  E-value=1.7  Score=43.11  Aligned_cols=41  Identities=17%  Similarity=0.374  Sum_probs=34.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      +++++|+||+|++|..++..+... |.+++++.+++++.+.+
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~  411 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEA-GATVFLVARNGEALDEL  411 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            678999999999999988877777 89999988877765433

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=89.58  E-value=2.1  Score=36.36  Aligned_cols=33  Identities=18%  Similarity=0.343  Sum_probs=27.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT  182 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~  182 (327)
                      +.++||+||+|.+|...+..+... |.++++..+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~-g~~v~~~~~   38 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKE-GSLVVVNAK   38 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeC
Confidence            578999999999999988877777 888776664

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=89.58  E-value=1.1  Score=38.45  Aligned_cols=99  Identities=18%  Similarity=0.266  Sum_probs=59.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHH----HcCCC-EE-EeCCC---CChhhh
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVK----ELGAD-KV-IDYRK---TKYEDI  209 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~----~~g~~-~v-~~~~~---~~~~~~  209 (327)
                      .+...++.||++|+=.|  .+.|.++..+++..+. -+++.....+++.+.++    ..|.+ .+ +...+   +.+...
T Consensus        32 I~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~  109 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEE  109 (247)
T ss_dssp             HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT
T ss_pred             HHHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceeccccccc
Confidence            34578999999999887  4456677788887732 36777778888777663    45543 22 21111   122111


Q ss_pred             -ccCccEEE-eCCC---Cchhhhhhh-cCCCcEEEee
Q 020320          210 -EEKFDVLY-DTIG---DCKNSFVVA-KDNAPIVDIT  240 (327)
Q Consensus       210 -~~~~d~v~-d~~g---~~~~~~~~l-~~~g~~v~~g  240 (327)
                       ...+|.|| |.-.   .+..+...| +++|+++.+.
T Consensus       110 ~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs  146 (247)
T PF08704_consen  110 LESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS  146 (247)
T ss_dssp             -TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred             ccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence             24688887 6554   347788899 8999998883

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=89.57  E-value=2.2  Score=37.41  Aligned_cols=65  Identities=18%  Similarity=0.145  Sum_probs=45.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      +|.|+| .|.+|...+..++.. |.++++.++++++.+.+.+.|.-...   ..+. +....+|++|-|+.
T Consensus         2 ~I~IIG-~G~mG~sla~~L~~~-g~~V~~~d~~~~~~~~a~~~g~~~~~---~~~~-~~~~~aDlVilavp   66 (279)
T PRK07417          2 KIGIVG-LGLIGGSLGLDLRSL-GHTVYGVSRRESTCERAIERGLVDEA---STDL-SLLKDCDLVILALP   66 (279)
T ss_pred             eEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCCcccc---cCCH-hHhcCCCEEEEcCC
Confidence            588999 899998887777766 88888888888888877777642111   1111 23456788888876

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=89.53  E-value=3.8  Score=36.11  Aligned_cols=141  Identities=21%  Similarity=0.255  Sum_probs=76.0

Q ss_pred             CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHH--HHHhcCCCCCCEEEEEc
Q 020320           79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIE--GFKTAGFKTGQTIFIVG  156 (327)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~--~l~~~~~~~~~~vlI~g  156 (327)
                      .++|+|.+..+             +|.+|..-.....+++.+++.+-..    ....|.+.  +++ .-.++|++++=+|
T Consensus       109 ~rig~~f~I~P-------------sw~~~~~~~~~~~i~lDPGlAFGTG----~HpTT~lcL~~Le-~~~~~g~~vlDvG  170 (300)
T COG2264         109 VRIGERFVIVP-------------SWREYPEPSDELNIELDPGLAFGTG----THPTTSLCLEALE-KLLKKGKTVLDVG  170 (300)
T ss_pred             EEeeeeEEECC-------------CCccCCCCCCceEEEEccccccCCC----CChhHHHHHHHHH-HhhcCCCEEEEec
Confidence            66777766543             3444322223566677666543222    22222322  222 2345889998888


Q ss_pred             CCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHH----cCCCEEEeCCCCChhh-hc-cCccEEEeCC-CCc-----
Q 020320          157 GAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKE----LGADKVIDYRKTKYED-IE-EKFDVLYDTI-GDC-----  223 (327)
Q Consensus       157 a~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~-~~-~~~d~v~d~~-g~~-----  223 (327)
                       || .|..++..+| + |++ +++++-.+-..+.+++    .+.+............ .. +.+|+++.+. ..+     
T Consensus       171 -cG-SGILaIAa~k-L-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La  246 (300)
T COG2264         171 -CG-SGILAIAAAK-L-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELA  246 (300)
T ss_pred             -CC-hhHHHHHHHH-c-CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHH
Confidence             54 5878887777 4 665 5555555555544433    3333111000011111 11 4799999665 322     


Q ss_pred             hhhhhhhcCCCcEEEeeC
Q 020320          224 KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       224 ~~~~~~l~~~g~~v~~g~  241 (327)
                      +.....++|+|.++..|.
T Consensus       247 ~~~~~~lkpgg~lIlSGI  264 (300)
T COG2264         247 PDIKRLLKPGGRLILSGI  264 (300)
T ss_pred             HHHHHHcCCCceEEEEee
Confidence            567788999999988874

>PLN02583 cinnamoyl-CoA reductase

Probab=89.51  E-value=0.93  Score=40.07  Aligned_cols=36  Identities=14%  Similarity=0.241  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      ++++|+|+||+|.+|..++..+... |.+++++.++.
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~-G~~V~~~~R~~   40 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSR-GYTVHAAVQKN   40 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEEcCc
Confidence            5678999999999999988888877 89998888753

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=89.49  E-value=7.4  Score=32.40  Aligned_cols=96  Identities=18%  Similarity=0.112  Sum_probs=57.1

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEE--EeCCCCChhhhccCcc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKV--IDYRKTKYEDIEEKFD  214 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~~~d  214 (327)
                      +...+++++++||-.| +|. |..+..+++..  .+++.++.+++..+.++    +.+.+.+  ...+..........+|
T Consensus        71 ~~~l~~~~~~~VLeiG-~Gs-G~~t~~la~~~--~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD  146 (212)
T PRK00312         71 TELLELKPGDRVLEIG-TGS-GYQAAVLAHLV--RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWPAYAPFD  146 (212)
T ss_pred             HHhcCCCCCCEEEEEC-CCc-cHHHHHHHHHh--CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCCcCCCcC
Confidence            4567788999999998 443 44555566643  46777777777655553    3444322  2221111111124689


Q ss_pred             EEEeCCC--C-chhhhhhhcCCCcEEEee
Q 020320          215 VLYDTIG--D-CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       215 ~v~d~~g--~-~~~~~~~l~~~g~~v~~g  240 (327)
                      +++-...  . .......|+++|+++..-
T Consensus       147 ~I~~~~~~~~~~~~l~~~L~~gG~lv~~~  175 (212)
T PRK00312        147 RILVTAAAPEIPRALLEQLKEGGILVAPV  175 (212)
T ss_pred             EEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence            8885433  2 255678899999987653

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=89.36  E-value=1.1  Score=39.46  Aligned_cols=91  Identities=27%  Similarity=0.321  Sum_probs=52.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHH----cCC-CEEEeCCCCChhhhccCccEEEeC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKE----LGA-DKVIDYRKTKYEDIEEKFDVLYDT  219 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~~~~d~v~d~  219 (327)
                      ..+|++||=+| || .|.+++..+| + |++ +++++.++...+.+++    .|. +.+.-....+..  ...+|+|+..
T Consensus       159 ~~~g~~vLDvG-~G-SGILaiaA~k-l-GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~~--~~~~dlvvAN  232 (295)
T PF06325_consen  159 VKPGKRVLDVG-CG-SGILAIAAAK-L-GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDLV--EGKFDLVVAN  232 (295)
T ss_dssp             SSTTSEEEEES--T-TSHHHHHHHH-T-TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCTC--CS-EEEEEEE
T ss_pred             ccCCCEEEEeC-Cc-HHHHHHHHHH-c-CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecccc--cccCCEEEEC
Confidence            56788998887 44 4666766666 4 665 5566666665555533    232 222111111111  1679999966


Q ss_pred             CC-Cc-----hhhhhhhcCCCcEEEeeCC
Q 020320          220 IG-DC-----KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       220 ~g-~~-----~~~~~~l~~~g~~v~~g~~  242 (327)
                      .- ..     +...+.++++|.++..|..
T Consensus       233 I~~~vL~~l~~~~~~~l~~~G~lIlSGIl  261 (295)
T PF06325_consen  233 ILADVLLELAPDIASLLKPGGYLILSGIL  261 (295)
T ss_dssp             S-HHHHHHHHHHCHHHEEEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHhhCCCCEEEEcccc
Confidence            53 21     5566788999998887743

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=89.34  E-value=0.61  Score=39.08  Aligned_cols=45  Identities=27%  Similarity=0.433  Sum_probs=36.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG  194 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g  194 (327)
                      |++++++|++|++|+.....+-.. |+++.+++.+.|+.+...+|.
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~k-gik~~~i~~~~En~~a~akL~   49 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEK-GIKVLVIDDSEENPEAIAKLQ   49 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHc-CchheeehhhhhCHHHHHHHh
Confidence            899999999999999987777767 999999987777665555543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=89.33  E-value=0.88  Score=40.30  Aligned_cols=89  Identities=21%  Similarity=0.324  Sum_probs=61.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEE-eCC-CCChhhhccCccEEEeCCCCc---
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVI-DYR-KTKYEDIEEKFDVLYDTIGDC---  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~-~~~-~~~~~~~~~~~d~v~d~~g~~---  223 (327)
                      ..++|+||+|=.|...+..+++. |.+-..+-+|..|+..+ .++|.+... .-. .........++++|++|+|..   
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~-g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt~~   85 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLARE-GLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYTRY   85 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHc-CCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccccccc
Confidence            45789999999999999999988 88887777898888766 568854432 111 122233457899999999943   


Q ss_pred             --hhhhhhhcCCCcEEEe
Q 020320          224 --KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 --~~~~~~l~~~g~~v~~  239 (327)
                        .....|.+.+-.++.+
T Consensus        86 g~plv~aC~~~GTdY~Di  103 (382)
T COG3268          86 GEPLVAACAAAGTDYADI  103 (382)
T ss_pred             ccHHHHHHHHhCCCeeec
Confidence              3344566555555554

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=89.29  E-value=2  Score=38.95  Aligned_cols=90  Identities=14%  Similarity=0.142  Sum_probs=50.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHHcC-CCEE--EeCCCCChhhhccCccEEEeCCCCc--
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKELG-ADKV--IDYRKTKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~~g-~~~v--~~~~~~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      .+|.|.|++|.+|...+.++....+.+++.+.+..++. .+.+..+ ....  ....+.+.. ...++|+||-|++..  
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~-~~~~vD~Vf~alP~~~~   81 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE-ILAGADVVFLALPHGVS   81 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH-HhcCCCEEEECCCcHHH
Confidence            47899999999999888877776566766666533222 2222222 1100  011111111 335799999998743  


Q ss_pred             -hhhhhhhcCCCcEEEee
Q 020320          224 -KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 -~~~~~~l~~~g~~v~~g  240 (327)
                       +.+..+++.+-.+++.+
T Consensus        82 ~~~v~~a~~aG~~VID~S   99 (343)
T PRK00436         82 MDLAPQLLEAGVKVIDLS   99 (343)
T ss_pred             HHHHHHHHhCCCEEEECC
Confidence             33444555555666664

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.29  E-value=4.1  Score=35.91  Aligned_cols=96  Identities=18%  Similarity=0.165  Sum_probs=63.8

Q ss_pred             ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhc---CCcEEEEeCCcccHHHHHHcCCCEEEeCCCC
Q 020320          129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFY---GASHVVATTSTPKVEFVKELGADKVIDYRKT  204 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~---g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~  204 (327)
                      ++|++....+..++..+ --.|++++|.|.+..+|.=.+.++...+   ++.+. ++-                  ++..
T Consensus       140 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVt-v~h------------------s~T~  200 (297)
T PRK14168        140 FLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVT-IVH------------------TRSK  200 (297)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEE-Eec------------------CCCc
Confidence            44665544555555544 3579999999999999988888887651   23222 221                  1223


Q ss_pred             ChhhhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          205 KYEDIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       205 ~~~~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      +.....+.+|+++-++|... -.-..++++..++.+|...
T Consensus       201 ~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gavVIDvGin~  240 (297)
T PRK14168        201 NLARHCQRADILIVAAGVPNLVKPEWIKPGATVIDVGVNR  240 (297)
T ss_pred             CHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEecCCCc
Confidence            34445577999999999663 3446788999999998654

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=89.21  E-value=1.8  Score=36.37  Aligned_cols=70  Identities=23%  Similarity=0.333  Sum_probs=45.7

Q ss_pred             EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEE-EeCCCC-Chhhhcc--CccEEEeCCCC
Q 020320          152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKV-IDYRKT-KYEDIEE--KFDVLYDTIGD  222 (327)
Q Consensus       152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v-~~~~~~-~~~~~~~--~~d~v~d~~g~  222 (327)
                      |||+||+|-+|..++..+... |..++...+++.+...... .....+ .|-.+. .+.+...  .+|.||.+++.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKK-GHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT-TTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHc-CCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence            799999999999999999988 8888877776665544433 232222 122221 1222222  56999998874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK11761 cysM cysteine synthase B; Provisional

Probab=89.15  E-value=3.5  Score=36.47  Aligned_cols=59  Identities=19%  Similarity=0.233  Sum_probs=45.5

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---CcccHHHHHHcCCCEEEeC
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---STPKVEFVKELGADKVIDY  201 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---~~~~~~~~~~~g~~~v~~~  201 (327)
                      .+...+.++++|+.. .+|..|++++.+|+.+ |.+.+++..   ++.+.+.++.+|++.++..
T Consensus        55 ~~~g~~~~g~~vv~a-SsGN~g~alA~~a~~~-G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~  116 (296)
T PRK11761         55 EKRGEIKPGDTLIEA-TSGNTGIALAMIAAIK-GYRMKLIMPENMSQERRAAMRAYGAELILVP  116 (296)
T ss_pred             HHcCCCCCCCEEEEe-CCChHHHHHHHHHHHc-CCCEEEEECCCCCHHHHHHHHHcCCEEEEeC
Confidence            345556777776554 5999999999999998 998888874   4567888889998876544

>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional

Probab=89.12  E-value=2.3  Score=42.17  Aligned_cols=74  Identities=19%  Similarity=0.355  Sum_probs=50.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc---------------------cHHHHHHcCCCEEEeCCC--
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP---------------------KVEFVKELGADKVIDYRK--  203 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~---------------------~~~~~~~~g~~~v~~~~~--  203 (327)
                      ..+++|+|+| +|+.|+.++..+... |.++.++...+.                     ..+.++++|.+..++..-  
T Consensus       191 ~~~k~VaIIG-aGpAGl~aA~~La~~-G~~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~  268 (652)
T PRK12814        191 KSGKKVAIIG-AGPAGLTAAYYLLRK-GHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGR  268 (652)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCcEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccC
Confidence            4578999999 899999999999988 888888875432                     134446677665443321  


Q ss_pred             -CChhhhccCccEEEeCCCC
Q 020320          204 -TKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       204 -~~~~~~~~~~d~v~d~~g~  222 (327)
                       .........+|.+|-++|+
T Consensus       269 dv~~~~~~~~~DaVilAtGa  288 (652)
T PRK12814        269 DITLEELQKEFDAVLLAVGA  288 (652)
T ss_pred             ccCHHHHHhhcCEEEEEcCC
Confidence             1122222358999988884

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=89.06  E-value=0.94  Score=40.25  Aligned_cols=37  Identities=30%  Similarity=0.399  Sum_probs=30.3

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          148 TGQTIFIVGG--AGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       148 ~~~~vlI~ga--~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      .|+++||+|+  ++++|.++++.+... |+++++ .+..++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~-Ga~Vv~-~~~~~~   46 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAA-GAEILV-GTWVPA   46 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHC-CCEEEE-EeCcch
Confidence            5889999998  699999999888888 999888 444333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	327
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		5e-33
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		4e-31
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		2e-28
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		5e-27
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		3e-24
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		3e-24
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		4e-24
3b6z_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Comple		3e-18
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		5e-18
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		9e-18
3gqv_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant		1e-17
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		1e-16
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		5e-16
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		1e-14
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		2e-14
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		2e-14
4a0s_A	447	Structure Of The 2-Octenoyl-Coa Carboxylase Reducta		4e-14
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		5e-14
3hzz_A	467	2.4 Angstrom Crystal Structure Of Streptomyces Coll		7e-14
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		8e-14
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		1e-13
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		1e-13
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		6e-13
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		7e-13
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		1e-12
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		3e-12
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		7e-12
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		1e-11
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		3e-11
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		4e-11
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		5e-11
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		5e-10
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		1e-09
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		3e-09
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		4e-09
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		8e-09
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		8e-09
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		8e-09
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		2e-08
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		5e-08
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-07
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		2e-07
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		1e-06
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		2e-06
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		3e-06
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		3e-06
1xa0_A	328	Crystal Structure Of Mcsg Target Apc35536 From Baci		3e-06
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		4e-06
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		9e-06
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		1e-05
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		1e-05
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		2e-05
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		3e-05
2cf2_D	295	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-05
1iyz_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		3e-05
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		7e-05
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		7e-05
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		8e-05
1o89_A	345	Crystal Structure Of E. Coli K-12 Yhdh Length = 345		8e-05
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		8e-05
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		9e-05
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		1e-04
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		1e-04
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		1e-04
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		2e-04
3nx4_A	324	Crystal Structure Of The Yhdh Oxidoreductase From S		3e-04
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		3e-04
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		5e-04
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		7e-04
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		8e-04
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		8e-04

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score =  138 bits (347), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 173/363 (47%), Gaps = 73/363 (20%)
Query: 4   AWYYEEYGPKEVLKLG-DFPLPTPQH-DQLLVQVRAAALNPIDSKRR-----------QR 50
           AW  ++YG  EVL+   +  +P   + ++++V+V AA++NPID   R           + 
Sbjct: 24  AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 83
Query: 51  PLF----PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAE 106
           PL       +FP   G D++G+V+  G  V  F  GDEV+  +  +      KQ G L+E
Sbjct: 84  PLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPW------KQ-GTLSE 136
Query: 107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFK----TGQTIFIVGGAGGV 161
           F+VV  + ++ KPK+++  +AASLP    TA     K  G      TG+ + I+G +GGV
Sbjct: 137 FVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGV 196
Query: 162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK---FDVLYD 218
           GT  IQ+ K +   +HV A  S    E V++LGAD VIDY+    E+  +    FD + D
Sbjct: 197 GTFAIQVMKAW--DAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILD 254
Query: 219 TIGDCKNS--------------------FVVAKDNAPIVD------IT---------WPP 243
            +G    +                    F++  D   I D      +T         W  
Sbjct: 255 NVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKG 314
Query: 244 SHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKV 303
            H R  ++    SG  L+ +   +++GK++  I+ T P  F  V EAF  +E G ARGK 
Sbjct: 315 VHYR--WAFFMASGPCLDDIAELVDAGKIRPVIEQTFP--FSKVPEAFLKVERGHARGKT 370
Query: 304 VIS 306
           VI+
Sbjct: 371 VIN 373

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 149/319 (46%), Gaps = 28/319 (8%)
Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-----PSDFP 58
           A  ++++GP +VLKL D P P  + +Q L++V AA+LNPID K R    F      ++ P
Sbjct: 9   AIQFDQFGPPKVLKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLP 68
Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
           +  G D +G V+  G+ V   N GD+V G        G        AE++      I +K
Sbjct: 69  SGLGYDFSGEVIELGSDVNNVNIGDKVXG------IAGFPDHPCCYAEYVCASPDTIIQK 122
Query: 119 PKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
            + +SF +AASLP A  TA++    A  K G  + I  GAGGVG L IQLAK     + V
Sbjct: 123 LEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ--KGTTV 180
Query: 179 VATTSTPKVEFVKELGADKVIDYRKTKY-EDIEEKFDVLYDTIGD--CKNSFVVAKDNAP 235
           + T S     F+K LGA++ I+Y +  +   I    D + D +G      S    K+   
Sbjct: 181 ITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKETGC 240
Query: 236 IVDI----------TWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFK 285
           IV +               H RA       + E L  L   +   KL+ +I     ++  
Sbjct: 241 IVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEISRI--FQLS 298
Query: 286 DVIEAFRYLETGRARGKVV 304
           + + A   LETG  RGK+V
Sbjct: 299 EAVTAHELLETGHVRGKLV 317

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 156/325 (48%), Gaps = 45/325 (13%)
Query: 20  DFPLPTPQHDQLLVQVRAAALNPIDSK-RRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTK 78
           + P P P    +LV+V+A ++NP+D K RR  P   +D+  + G D AGIV A G  VT 
Sbjct: 44  ELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVI-GYDAAGIVSAVGPDVTL 102
Query: 79  FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
           F  GDEV+         G + + G  AEF +V+E ++ +KPK + + EAA+LPL   TA 
Sbjct: 103 FRPGDEVF-------YAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAW 155
Query: 139 EGF------KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVK 191
           E F                I IVGGAGGVG++ +Q+A+     + V+AT S P+  E+VK
Sbjct: 156 EAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLT-VIATASRPETQEWVK 214
Query: 192 ELGADKVIDYRKTKYEDIEE----KFDVLYDTIGDCKNSFVVAK-----------DNAPI 236
            LGA  VID+ K    ++          ++ T    K++  +A            D+   
Sbjct: 215 SLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPSA 274
Query: 237 VDITWPPSHPRAIYSSLTVS------------GEILEKLRPFIESGKLKAQI-DPTGPYK 283
            DI        +I+  L  +            G +L  +   ++ G+L+  + +   P  
Sbjct: 275 FDIXLFKRKAVSIHHELXFTRPXFGTPDXSEQGRLLNDVSRLVDEGRLRTTLTNRLSPIN 334
Query: 284 FKDVIEAFRYLETGRARGKVVISAF 308
             ++ +A   +E+G ARGKVVI  F
Sbjct: 335 AANLKQAHALVESGTARGKVVIEGF 359

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score =  118 bits (295), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 112/197 (56%), Gaps = 17/197 (8%)
Query: 15  VLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGT 74
           + K  +  +P P+  ++LV++++ ++NP+D+K  QR +  S  P V G D  G+V + G 
Sbjct: 19  LFKTFNLDIPEPKVHEILVKIQSISVNPVDTK--QRLMDVSKAPRVLGFDAIGVVESVGN 76
Query: 75  SVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAV 134
            VT FN GD VY         G   Q G+ AE+ ++ E L+AK PKNIS E+A SLPL  
Sbjct: 77  EVTMFNQGDIVY-------YSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTG 129
Query: 135 QTAIEGF-------KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187
            TA E         +      G+T+ I+ GAGGVG++  Q+AK  YG   +   +    +
Sbjct: 130 ITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKA-YGLRVITTASRNETI 188
Query: 188 EFVKELGADKVIDYRKT 204
           E+ K++GAD V++++++
Sbjct: 189 EWTKKMGADIVLNHKES 205

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 158/331 (47%), Gaps = 43/331 (12%)
Query: 8   EEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRR--QRPLFPSDFPAVPGCDM 65
           E  GP  + KL     P P   Q+LVQ+ A+  NP+D+K R  + P      PA+ G D+
Sbjct: 15  EANGPFVLRKLAR---PQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGXDL 71
Query: 66  AGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFE 125
           AG VVA G  V  F  GD V+G        G L+  G  A+F  V+  L+A KP  ++  
Sbjct: 72  AGTVVAVGPEVDSFRVGDAVFGLT---GGVGGLQ--GTHAQFAAVDARLLASKPAALTXR 126
Query: 126 EAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184
           +A+ LPL   TA EG    A  + GQT+ I GG GGVG + IQ+A      + V AT   
Sbjct: 127 QASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIA--LARGARVFATARG 184
Query: 185 PKVEFVKELGADKVIDYRKTKYEDIE----EKFDVLYDTIGD--CKNSFVVAKDNAPIVD 238
             +E+V++LGA  +   R+ +    E    + FD++YDT+G      SF   K    +V 
Sbjct: 185 SDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVS 244
Query: 239 -ITW------PPSHPRAIYS------------SLTVSGEILEKLRPFIESGKLKAQIDPT 279
            + W      P S  +A YS             L   GE L +    +++GKL  ++DP 
Sbjct: 245 CLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEXLREADALVQTGKLAPRLDPR 304
Query: 280 GPYKFKDVIEAFRYL----ETGRARGKVVIS 306
             +   ++  A+  +    +  R RGK+ I+
Sbjct: 305 -TFSIAEIGSAYDAVLGRNDVPRQRGKIAIT 334

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 152/338 (44%), Gaps = 50/338 (14%)
Query: 11  GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSDFPAVPGCDMAG 67
           G  EVL++ D P+P P   ++ V+++AAALN +D   R+    P  P   P V G D +G
Sbjct: 10  GGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLP--LPHVLGADGSG 67
Query: 68  IVVAKGTSVTKFNTGDEVYGNI--------QDFNAEGKL---------KQLGALAEFIVV 110
           +V A G  V  F  GDEV  N         +    E  L          + G  AE++V+
Sbjct: 68  VVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVL 127
Query: 111 EESLIAKKPKNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLA 169
            E+ +A KPKN+SFEEAA++PL   TA +      G + G  + ++    GV    IQ+A
Sbjct: 128 PEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIA 187
Query: 170 KHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGDC 223
           K  +GA  +    S  K+   K LGAD+ ++Y    +     +       D + D  G  
Sbjct: 188 K-LFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGAL 246
Query: 224 KNSFVV-AKDNAPIVDI---------TWPPSHPRAIYSSLTVSGEIL---EKLRP---FI 267
               V+ A  N   + I         T P +H    Y  L++ G  +    +L P   F+
Sbjct: 247 YFEGVIKATANGGRIAIAGASSGYEGTLPFAH--VFYRQLSILGSTMASKSRLFPILRFV 304
Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           E GKLK  +    P   +   E  R LE  R  GKVV+
Sbjct: 305 EEGKLKPVVGQVLP--LEAAAEGHRLLEERRVFGKVVL 340

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 147/331 (44%), Gaps = 45/331 (13%)
Query: 8   EEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMA 66
           + +G  +V  +G  PLP     ++LV+  A  +N  D  +RQ    P  D   + G +++
Sbjct: 35  KSFGGPDVXVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELS 94
Query: 67  GIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEE 126
           G +V  G  V+ +  GD+V G          L   GA AE+ ++    I   PK     +
Sbjct: 95  GEIVGVGPGVSGYAVGDKVCG----------LANGGAYAEYCLLPAGQILPFPKGYDAVK 144
Query: 127 AASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP 185
           AA+LP    T     F+ AG   G+++ I GG  G+GT  IQLA+ F GA       ST 
Sbjct: 145 AAALPETFFTVWANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTG 203
Query: 186 KVEFVKELGADKVIDYRKTKYEDI-----EEKFDVLYDTIGDC---KNSFVVAKDN---- 233
           K E  + LGA + I+YR   +  +      +  D++ D IG     +N   +AKD     
Sbjct: 204 KCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSI 263
Query: 234 --------------API----VDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQ 275
                         +PI    + +T     PR       +  ++L ++ P +E+G +   
Sbjct: 264 IAFLGGAVAEKVNLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPV 323
Query: 276 IDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
           I     + F+DV +A R LE G   GKV ++
Sbjct: 324 IHKV--FAFEDVADAHRLLEEGSHVGKVXLT 352

>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 14  EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKG 73
           EV      P P    DQ+ V+V A A+NP D+K R +   P  F    G D AG VVA G
Sbjct: 22  EVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTKMRGQFATPWAFL---GTDYAGTVVAVG 78
Query: 74  TSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLA 133
           + VT    GD VYG   +     +    GA +++ V    + AK PK +SFE+AA+LP  
Sbjct: 79  SDVTHIQVGDRVYGAQNEMCP--RTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAG 136
Query: 134 VQTAIEGFKTAGFKTGQT-------------IFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           + TA    K  G                   + + GG+    T+ +Q+ +        +A
Sbjct: 137 ISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLR--LSGYIPIA 194
Query: 181 TTSTPKVEFVKELGADKVIDYR 202
           T S    +  K  GA++V DYR
Sbjct: 195 TCSPHNFDLAKSRGAEEVFDYR 216

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 150/337 (44%), Gaps = 58/337 (17%)
Query: 7   YEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDF-PAVPGCDM 65
           +   G  EVL+  DF    P    ++V+ +A  LN ID+  R   L+P+ F P+  G + 
Sbjct: 7   FSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSG-LYPAPFLPSGLGAEG 65
Query: 66  AGIVVAKGTSVTKFNTGDEV-YGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISF 124
           AG+V A G  VT+F  GD V YG             LGA +E  V+ E+ + K   ++SF
Sbjct: 66  AGVVEAVGDEVTRFKVGDRVAYGT----------GPLGAYSEVHVLPEANLVKLADSVSF 115
Query: 125 EEAASL---PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
           E+AA+L    L VQ  +   +T   K G+ I     AGGVG+L  Q AK     + ++ T
Sbjct: 116 EQAAALMLKGLTVQYLLR--QTYQVKPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGT 171
Query: 182 TSTP-KVEFVKELGADKVIDYRKTKYEDIE---------EKFDVLYDTIGD--------- 222
            S+P K    K LGA + IDY    +ED+          +K  V+YD +G          
Sbjct: 172 VSSPEKAAHAKALGAWETIDY---SHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDS 228
Query: 223 -CKNSFVVAKDNA--PIVDITWP-PSHPRAIYSSLTVSGE----------ILEKLRPFIE 268
                 VV+  NA  P+  +     +   ++Y +    G           + ++L   + 
Sbjct: 229 VAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLA 288
Query: 269 SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           SGKLK  +D    Y  KD  +A   L   R  G  ++
Sbjct: 289 SGKLK--VDGIEQYALKDAAKAQIELSARRTTGSTIL 323

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 23/213 (10%)
Query: 9   EYGPKEVLKL-GDFPLPTPQHDQLLVQVRAAALNPIDSKRR-----QRPLFPSDFPAVPG 62
           E+G  EVLKL  D  +P P+  Q+L++V A  +NP+++  R     ++PL P      PG
Sbjct: 37  EFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY----TPG 92
Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNI 122
            D+AG++ A G + + F  GD V+ +             G  AE+ +  +  + K P+ +
Sbjct: 93  SDVAGVIEAVGDNASAFKKGDRVFTSSTIS---------GGYAEYALAADHTVYKLPEKL 143
Query: 123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
            F++ A++ +   TA      +A  K G+++ + G +GGVG    Q+A+ +     ++ T
Sbjct: 144 DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAY--GLKILGT 201
Query: 182 TSTPKVE-FVKELGADKVIDYRKTKYEDIEEKF 213
             T + +  V + GA +V ++R+  Y D  +K+
Sbjct: 202 AGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKY 234

>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 14  EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKG 73
           EV      P P    DQ+ V+V A A+NP D+  R +   P  F    G D AG VVA G
Sbjct: 22  EVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFATPWAFL---GTDYAGTVVAVG 78
Query: 74  TSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLA 133
           + VT    GD VYG   +     +    GA +++ V    + AK PK +SFE+AA+LP  
Sbjct: 79  SDVTHIQVGDRVYGAQNEMCP--RTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAG 136
Query: 134 VQTAIEGFKTAGFKTGQT-------------IFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           + TA    K  G                   + + GG+    T+ +Q+ +        +A
Sbjct: 137 ISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLR--LSGYIPIA 194
Query: 181 TTSTPKVEFVKELGADKVIDYR 202
           T S    +  K  GA++V DYR
Sbjct: 195 TCSPHNFDLAKSRGAEEVFDYR 216

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 131/303 (43%), Gaps = 35/303 (11%)
Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FPSDFPAVPGCDMAGI 68
           +G    L+L    +P PQ  +L ++V+A  LN ID   RQ  +  P   P VPG + +GI
Sbjct: 12  FGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGI 71
Query: 69  VVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAA 128
           V A G SV  +  GD V   + ++N         A AE +      + K P ++SF EAA
Sbjct: 72  VEALGDSVKGYEIGDRVMAFV-NYN---------AWAEVVCTPVEFVYKIPDDMSFSEAA 121
Query: 129 SLPLAVQTA-IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187
           + P+   TA +  F+ A  + G ++ +    GGVG  V QL       + V  T ST K 
Sbjct: 122 AFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVT-VFGTASTFKH 180
Query: 188 EFVK-------ELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
           E +K       +  AD V + ++   E +        D + DC     +  DN       
Sbjct: 181 EAIKDSVTHLFDRNADYVQEVKRISAEGV--------DIVLDC-----LCGDNTGKGLSL 227
Query: 241 WPPSHPRAIY-SSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRA 299
             P     +Y SS  V+GE  +    F +S     +++P   Y+   VI  F  L     
Sbjct: 228 LKPLGTYILYGSSNMVTGET-KSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFK 286
Query: 300 RGK 302
           +G+
Sbjct: 287 QGR 289

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 121/246 (49%), Gaps = 38/246 (15%)
Query: 2   QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP 61
           Q     +E G  +V+K  D+P+P+   ++LL++ +   +N I+S  R + ++P + P V 
Sbjct: 9   QKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFR-KGIYPCEKPYVL 67
Query: 62  GCDMAGIVVAKGTSVTKFNTGDEV-YGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
           G + +G VVAKG  VT F  GD+V Y +   F    K+   G            + K PK
Sbjct: 68  GREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGP-----------VMKLPK 116
Query: 121 NISFEE----AASLPLAVQTAIEGFKTAGF--KTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
             S EE    AA L L V TA+  F    +  K G  + +   AGGVG ++ QL K    
Sbjct: 117 GTSDEELKLYAAGL-LQVLTALS-FTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKM--K 172
Query: 175 ASHVVATTST-PKVEFVKELGADKVIDYRKTKYEDIEEK---------FDVLYDTIGDCK 224
            +H +A  ST  K++  KE GA+ +I+  K   EDI  +          D  +D++G  K
Sbjct: 173 GAHTIAVASTDEKLKIAKEYGAEYLINASK---EDILRQVLKFTNGKGVDASFDSVG--K 227
Query: 225 NSFVVA 230
           ++F ++
Sbjct: 228 DTFEIS 233

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 140/346 (40%), Gaps = 60/346 (17%)
Query: 5   WYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FPSDFPAVPGC 63
           W  E   P + LKL + P+P      ++V+  A +LN  D    +        FP VP  
Sbjct: 31  WSTETVAPHD-LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPAS 89
Query: 64  DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL------------------GALA 105
           D +G+V A G SVT+F  GD V   I  F A G L  L                  G L+
Sbjct: 90  DXSGVVEAVGKSVTRFRPGDRV---ISTF-APGWLDGLRPGTGRTPAYETLGGAHPGVLS 145
Query: 106 EFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLV 165
           E++V+ E      PK++   EA++LP A  TA       G        +V G GGV    
Sbjct: 146 EYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFG 205
Query: 166 IQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKN 225
           +Q+AK   GA  +V ++S  K++    LGAD  I+  +   ED  E+   +Y   GD   
Sbjct: 206 LQIAKA-TGAEVIVTSSSREKLDRAFALGADHGINRLE---EDWVER---VYALTGDRGA 258
Query: 226 SFVVAKDNAPIVDITWPPSHPR------AIYSSLTVSGEI-------------------- 259
             ++       +  +     P        +     VSG +                    
Sbjct: 259 DHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRA 318
Query: 260 LEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           LE L   ++   LK  ID    YKF +V EA  +L+ G   GKVVI
Sbjct: 319 LEDLVGAVDRLGLKPVIDXR--YKFTEVPEALAHLDRG-PFGKVVI 361

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 138/330 (41%), Gaps = 48/330 (14%)
Query: 16  LKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGIVVAKG 73
           L++ +  +P P   Q+LV++ A+ +   D  +     P+ P   P +PG +  G V A G
Sbjct: 19  LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPP-LPFIPGHEGVGYVAAVG 77
Query: 74  TSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFIVVEESL 114
           + VT+   GD V G    + A G  +                     G  AE+++ + + 
Sbjct: 78  SGVTRVKEGDRV-GIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNY 136
Query: 115 IAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
           +   PKN+ F E A +  A  T  +G K    + GQ + I  G GG+G + +Q A+    
Sbjct: 137 VGILPKNVEFAEIAPILCAGVTVYKGLKQTNARPGQWVAI-SGIGGLGHVAVQYARAM-- 193
Query: 175 ASHVVAT-TSTPKVEFVKELGADKVIDYRKTK-----YEDIEEKFDVLYDTIGDCK--NS 226
             HV A      K+E  ++LGA   ++ R+         DI     VL   + +     +
Sbjct: 194 GLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQA 253
Query: 227 FVVAKDNAPIVDITWPPSH-PRAIYS----SLTVSGEI------LEKLRPFIESGKLKAQ 275
             +A+    I  +  PP   P  I+      L ++G I      L++   F   G +KA 
Sbjct: 254 IGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEGLVKAT 313
Query: 276 IDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           I P    K  D+ +    +  G+  G++V+
Sbjct: 314 IHPG---KLDDINQILDQMRAGQIEGRIVL 340

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 106/244 (43%), Gaps = 46/244 (18%)
Query: 12  PKEVLKLGDFPLPTPQHDQLLVQVRAAALN----------PIDS-------KRRQRPLFP 54
           P++ + L D P+P     + LV V A+++N          P+ +        R       
Sbjct: 54  PRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKR 113
Query: 55  SDFP-AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAE-----------------G 96
            D P  V G D+AG+V+  G  V  +  GDEV  +      E                 G
Sbjct: 114 HDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWG 173
Query: 97  KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT---AGFKTGQTIF 153
                G LAE  +V+ + +  KP ++S+EEAA+  L   TA     +   AG K G  + 
Sbjct: 174 FETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVL 233
Query: 154 IVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVID-----YRKTKYE 207
           I G +GG+G+   Q A    G ++ +   S+P K E  + +GA+ +ID     YR  K E
Sbjct: 234 IWGASGGLGSYATQFA--LAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDE 291
Query: 208 DIEE 211
           + ++
Sbjct: 292 NTQD 295

>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 13  KEVLKLGDFPLPTPQHDQLLVQVRAAALN----------PI-------DSKRRQRPLFPS 55
           ++ L+LG+ P+P    D++LV V A+++N          PI        + R+       
Sbjct: 47  RKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRH 106
Query: 56  DFP-AVPGCDMAGIVVAKGTSVTKFNTGDEV--------------YGNIQ---DFNAEGK 97
           D P  V G D +G+VV  G  V ++  GD V              +G+     +  A G 
Sbjct: 107 DQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGF 166
Query: 98  LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF---KTAGFKTGQTIFI 154
               G LAE+ VV  S +  KP ++++EEAA  PL   TA       + A  K G  + I
Sbjct: 167 ETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLI 226
Query: 155 VGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200
            G +GG+G+  IQ  K+  G   V   +S  K   V+ LG D VI+
Sbjct: 227 WGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRALGCDLVIN 271

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 139/339 (41%), Gaps = 58/339 (17%)
Query: 13  KEVLKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGIVV 70
           KE LK+ +   PT  + ++LV+++A  +   D  +     P+ P   P +PG +  GIV 
Sbjct: 10  KEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK-LPLIPGHEGVGIVE 68
Query: 71  AKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFIVVE 111
             G  VT    GD V G    ++A G                        G  AE+    
Sbjct: 69  EVGPGVTHLKVGDRV-GIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 112 ESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKH 171
              + K P N+SFEEAA +  A  T  +  K  G K G+ + I  G GG+G + +Q AK 
Sbjct: 128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIY-GIGGLGHVAVQYAKA 186
Query: 172 FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVA- 230
             G + V       K+E  KELGAD V++  K      E+    + + +G    + V A 
Sbjct: 187 M-GLNVVAVDIGDEKLELAKELGADLVVNPLK------EDAAKFMKEKVGGVHAAVVTAV 239
Query: 231 ------------KDNAPIVDITWPPSH-PRAIYSS----LTVSGEI------LEKLRPFI 267
                       +     V +  PP   P  I+ +    + + G I      L++   F 
Sbjct: 240 SKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFA 299
Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
             GK+K  I+       + + E F  +  G+  G+VV++
Sbjct: 300 AEGKVKTIIEVQ---PLEKINEVFDRMLKGQINGRVVLT 335

>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 41/235 (17%)
Query: 12  PKEVLKLGDFPLPTPQHDQLLVQVRAAALN----------PIDS---KRRQRPLFP---- 54
           P++ + L + P+P     + LV V A+++N          P+ +     R   L P    
Sbjct: 72  PRKSIHLDEVPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKR 131
Query: 55  SDFP-AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAE-----------------G 96
            D P  + G D+AG+V+  G  V  +  GDEV  +      E                 G
Sbjct: 132 HDLPYHIIGSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWG 191
Query: 97  KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT---AGFKTGQTIF 153
                G LAE  +V+ + +  KPK++++EEAA+  L   TA     +   A  K G  + 
Sbjct: 192 FETNFGGLAEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVL 251
Query: 154 IVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYE 207
           I G +GG+G+   Q A    G ++ +   S+P K E  + +GA+ +ID     Y+
Sbjct: 252 IWGASGGLGSYATQFA--LAGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYK 304

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 141/346 (40%), Gaps = 60/346 (17%)
Query: 3   NAWYYEEYGPKEV--LKLGDFPLPT-PQHD-QLLVQVRAAALNPIDSKRRQRPLFPSDFP 58
             W  E   P  +  L L D P  T P  D ++ + +RAA +N  D+      +    +P
Sbjct: 209 TGWRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDAL-----IALGMYP 263
Query: 59  AVP--GCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIA 116
            V   G + AG+VV  G  VT    GD V G I         K  G LA   V +  ++ 
Sbjct: 264 GVASLGSEGAGVVVETGPGVTGLAPGDRVMGMIP--------KAFGPLA---VADHRMVT 312
Query: 117 KKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA 175
           + P   SF  AAS+P+   TA       AG + G+++ +   AGGVG   IQLA+H    
Sbjct: 313 RIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHL--G 370
Query: 176 SHVVATTSTPK---VEFVKE-LGADKVIDYRK-----TKYEDIEEKFDVLYDTIGDCKNS 226
           + V AT S  K   VE  +E L + +  D+ +     T    ++   + L     D    
Sbjct: 371 AEVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLR 430
Query: 227 FVV------------AKDNAPIVDITWPPSHPRAIYSSL-TVS------GEILEKLRPFI 267
            +              +D   + D     +HP   Y +  TV       GE+L +L    
Sbjct: 431 MLPRGGRFLELGKTDVRDPVEVAD-----AHPGVSYQAFDTVEAGPQRIGEMLHELVELF 485
Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYTES 313
           E   L+    P   +  +   EA R+L   R  GK+V++  P  ++
Sbjct: 486 EGRVLEPL--PVTAWDVRQAPEALRHLSQARHVGKLVLTMPPVWDA 529

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 138/339 (40%), Gaps = 58/339 (17%)
Query: 13  KEVLKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGIVV 70
           KE LK+ +   PT  + ++LV+++A  +   D  +     P+ P   P +PG +  GIV 
Sbjct: 10  KEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK-LPLIPGHEGVGIVE 68
Query: 71  AKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFIVVE 111
             G  VT    GD V G    ++A G                        G  AE+    
Sbjct: 69  EVGPGVTHLKVGDRV-GIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 112 ESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKH 171
              + K P N+SFEEAA +  A  T  +  K  G K G+ + I  G GG G + +Q AK 
Sbjct: 128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIY-GIGGFGHVAVQYAKA 186
Query: 172 FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVA- 230
             G + V       K+E  KELGAD V++  K      E+    + + +G    + V A 
Sbjct: 187 M-GLNVVAVDIGDEKLELAKELGADLVVNPLK------EDAAKFMKEKVGGVHAAVVTAV 239
Query: 231 ------------KDNAPIVDITWPPSH-PRAIYSS----LTVSGEI------LEKLRPFI 267
                       +     V +  PP   P  I+ +    + + G I      L++   F 
Sbjct: 240 SKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFA 299
Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
             GK+K  I+       + + E F  +  G+  G+VV++
Sbjct: 300 AEGKVKTIIEVQ---PLEKINEVFDRMLKGQINGRVVLT 335

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 139/341 (40%), Gaps = 59/341 (17%)
Query: 16  LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--------FPSDFPAVPGCDMAG 67
           LKL D P+P P+  Q+L+++ AA +   D   RQ                P   G ++AG
Sbjct: 13  LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 68  IVVAKGTSVTKFNTGDEVYGNIQDFNAEGK-------------------LKQLGALAEFI 108
            +   G  V  ++ GD V   +  +  EG                    +   GA AE++
Sbjct: 73  RIEEVGDEVVGYSKGDLV--AVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYV 130
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           +V       K + +S  EAA L  +  T     + A     +T+ ++G  GG+GT+ IQ+
Sbjct: 131 LVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQI 190
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLY----DTIGDCK 224
           AK   GA+ +        +E  K  GAD VI+   +  + + E   +      D + D  
Sbjct: 191 AKAVSGATIIGVDVREEALEAAKRAGADYVIN--ASSQDPVSEIRRITQGKGADAVIDLN 248
Query: 225 NS--------FVVAKDNAPIV------DITWPPSHPRAIYSSLTVSGEILEKLRPFI--- 267
           NS        +V+AK    ++      D+ +    P    + +   G ++     F+   
Sbjct: 249 NSEKTLSIYPYVLAKQGKYVMVGLFGADLKY--HAPLITLNEVQFIGSLVGNQSDFLGIM 306
Query: 268 ---ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
              E+GK+K  +  T   K ++  EA   LE  +A G+ V+
Sbjct: 307 SLAEAGKVKPMVTKT--MKLEEANEAIDNLENFKAVGRQVL 345

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 19/240 (7%)
Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGC 63
           A ++++ G  E L + +   P+P   ++L++V A+ALN  D  +RQ    P      PG 
Sbjct: 9   AVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPP-----PGA 63
Query: 64  DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNIS 123
                + A G  V +   G + +  I D      L   G  A+++ V E L+   P+ ++
Sbjct: 64  SNILGLEASG-HVAELGPGCQGHWKIGDTAM--ALLPGGGQAQYVTVPEGLLMPIPEGLT 120
Query: 124 FEEAASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
             +AA++P A  TA +     G  + G  + I  G  GVGT  IQL +   GA  +V   
Sbjct: 121 LTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAG 179
Query: 183 STPKVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGDC---KNSFVVAKDN 233
           S  K++  ++LGA    +Y+K  + +   KF      +++ D IG     KN   +A D 
Sbjct: 180 SQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDG 239

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 19/245 (7%)
Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGC 63
           A ++++ G  E L + +   P+P   ++L++V A+ALN  D  +RQ    P      PG 
Sbjct: 25  AVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPP-----PGA 79
Query: 64  DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNIS 123
                + A G  V +   G + +  I D      L   G  A+++ V E L+   P+ ++
Sbjct: 80  SNILGLEASG-HVAELGPGCQGHWKIGDTAM--ALLPGGGQAQYVTVPEGLLMPIPEGLT 136
Query: 124 FEEAASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
             +AA++P A  TA +     G  + G  + I  G  GVGT  IQL +   GA  +V   
Sbjct: 137 LTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAG 195
Query: 183 STPKVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGDCKNSFVVAKDNAPI 236
           S  K++  ++LGA    +Y+K  + +   KF      +++ D IG    S+     N   
Sbjct: 196 SQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG---GSYWEKNVNCLA 252
Query: 237 VDITW 241
           +D  W
Sbjct: 253 LDGRW 257

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 105/249 (42%), Gaps = 33/249 (13%)
Query: 16  LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDF----PAVPGCDMAGIVVA 71
           L+L   P+P P+ D++L+Q+    +   D    +     +DF    P V G + +G VV 
Sbjct: 16  LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRI-ADFIVKDPMVIGHEASGTVVK 74
Query: 72  KGTSVTKFNTGDEVY------GNIQDFNAEGKLKQL------------GALAEFIVVEES 113
            G +V     GD V            F  EGK                G LA + V    
Sbjct: 75  VGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAAD 134
Query: 114 LIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHF 172
              K P N+S EE A L PL+V   +   + AG + G T+ ++G AG +G LV  LA   
Sbjct: 135 FCHKLPDNVSLEEGALLEPLSV--GVHACRRAGVQLGTTVLVIG-AGPIG-LVSVLAAKA 190
Query: 173 YGASHVVATTSTPKVEFVKELGAD--KVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVA 230
           YGA  V    S  ++E  K  GAD   V+D  K +   I E+   +   IGD  N  +  
Sbjct: 191 YGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIER---IRSAIGDLPNVTIDC 247
Query: 231 KDNAPIVDI 239
             N   + I
Sbjct: 248 SGNEKCITI 256

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 139/337 (41%), Gaps = 56/337 (16%)
Query: 7   YEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMA 66
           + ++G  EVL+  +F    P  +++ V+ +A  +N ID+  R     P   P+  G + A
Sbjct: 7   FHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAA 66
Query: 67  GIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEE 126
           GIV   G+ V     GD V        A+  L    ++   I  + +++   P  ISFE+
Sbjct: 67  GIVSKVGSGVKHIKAGDRV------VYAQSALGAYSSVHNIIADKAAIL---PAAISFEQ 117
Query: 127 AASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP 185
           AA+  L   T      KT   K  +       AGGVG +  Q AK   GA  +    +  
Sbjct: 118 AAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQ 176
Query: 186 KVEFVKELGADKVIDYRKTKYEDIEEKFD---------VLYDTIG--------DC----- 223
           K +   + GA +VI+YR+   ED+ E+           V+YD++G        DC     
Sbjct: 177 KAQSALKAGAWQVINYRE---EDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRG 233
Query: 224 ------KNSFVVAKDNAPIVD------ITWPPSHPRAIYSSLTVSGEILE---KLRPFIE 268
                  +S  V   N  I++      +T P     ++   +T   E+ E   +L   I 
Sbjct: 234 LMVSFGNSSGAVTGVNLGILNQKGSLYVTRP-----SLQGYITTREELTEASNELFSLIA 288
Query: 269 SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           SG +K  +     Y  KD   A   LE+   +G  ++
Sbjct: 289 SGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLL 325

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 20/241 (8%)
Query: 2   QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSK-RRQRPLFPSDFPAV 60
              W Y+       + L    +P    D +LVQ +A  +NP+D K  +  P+  S+   V
Sbjct: 5   HQVWAYQT--KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSN-GHV 61
Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
           PG D AG++V  G  V     G  V  +         LK+ G+ AEF V+    +   P 
Sbjct: 62  PGVDGAGVIVKVGAKVDSKXLGRRVAYHT-------SLKRHGSFAEFTVLNTDRVXTLPD 114
Query: 121 NISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           N+SFE AA+LP  + TA + F+       + + IV    G G +   L +    A +VV 
Sbjct: 115 NLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIV----GFGAVNNLLTQXLNNAGYVVD 170
Query: 181 TTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVV--AKDNAPIVD 238
             S       + L A + + +   +   + +K+  ++D +     + +V   K N  I+ 
Sbjct: 171 LVSA---SLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQNAAALVPSLKANGHIIC 227
Query: 239 I 239
           I
Sbjct: 228 I 228

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 132/331 (39%), Gaps = 50/331 (15%)
Query: 16  LKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGIVVAKG 73
           L + + P+P P   Q+ V++ A+ +   D  +     P+ P+  P +PG +  G V A G
Sbjct: 15  LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPT-LPFIPGHEGVGYVSAVG 73
Query: 74  TSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFIVVEESL 114
           + V++   GD V G    ++A G  +                     G   E++V + + 
Sbjct: 74  SGVSRVKEGDRV-GVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNY 132
Query: 115 IAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
           +   P  + F E A +  A  T  +G K    + GQ + ++ G GG+G + +Q A+   G
Sbjct: 133 VGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWV-VISGIGGLGHVAVQYARAM-G 190
Query: 175 ASHVVATTSTPKVEFVKELGADKVIDYRKTK-----YEDIEEKFDVLY---------DTI 220
                      K+   + LGA+  ++ R T       ++I     VL            I
Sbjct: 191 LRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAI 250
Query: 221 GDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEI------LEKLRPFIESGKLKA 274
           G  +    +A +  P  D   P      +   +T+ G I      L++   F   G +KA
Sbjct: 251 GMVRRGGTIALNGLPPGDFGTPIFD--VVLKGITIRGSIVGTRSDLQESLDFAAHGDVKA 308
Query: 275 QIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            +      K  DV + F  L  G+  G+VV+
Sbjct: 309 TVSTA---KLDDVNDVFGRLREGKVEGRVVL 336

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 136/335 (40%), Gaps = 56/335 (16%)
Query: 16  LKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGIVVAKG 73
           L + + P+P P   Q+ V ++A+ +   D  +     P+ P+  P +PG +  G V A G
Sbjct: 38  LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNP-PFIPGHEGVGFVSAVG 96
Query: 74  TSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFIVVEESL 114
           + V     GD V G    + A G  +                     G  AE++V + + 
Sbjct: 97  SGVKHVKEGDRV-GIPWLYTACGHCRHCLGGWETLCEEQLNTGYSVNGGFAEYVVADPNF 155
Query: 115 IAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
           +   PKNI F E A +  A  T  +G K    K G  + ++ G GG+G + +Q A+   G
Sbjct: 156 VGHLPKNIDFNEIAPVLCAGVTVYKGLKVTDTKPGDWV-VISGIGGLGHMAVQYARAM-G 213
Query: 175 ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFV------ 228
            +         K++  + LGA   ++ +       +    +  +T G  +   V      
Sbjct: 214 LNVAAVDIDDRKLDLARRLGATVTVNAKTVA----DPAAYIRKETDGGAQGVLVTAVSPK 269
Query: 229 --------VAKDNAPIVDITWPPSHPRAIY----SSLTVSGEI------LEKLRPFIESG 270
                   VA+     ++   P   P +I+    + +TV G I      L++   F   G
Sbjct: 270 AFEQALGMVARGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSIVGTRLDLQESLDFAADG 329
Query: 271 KLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           K+KA I  TG  K +D+   F  +  G   G++V+
Sbjct: 330 KVKATIQ-TG--KLEDINAIFDDMRQGNIEGRIVM 361

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 29/222 (13%)
Query: 6   YYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGC 63
           +YE +G    L+  D P+P P+ ++LL+ V+ + +   D  +     PL P   P V G 
Sbjct: 11  FYESHGK---LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPL-PVKLPLVGGH 66
Query: 64  DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL--------------------GA 103
           + AG+VV  G +V  +  GD  Y  I+  N      +                     G+
Sbjct: 67  EGAGVVVGMGENVKGWKIGD--YAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGS 124
Query: 104 LAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGT 163
             ++   +    A  P+     + A +  A  T  +  K+A    G  + I G AGG+G+
Sbjct: 125 FQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGS 184
Query: 164 LVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK 205
           L +Q AK   G   +       K E  + +G +  ID+ K K
Sbjct: 185 LAVQYAKAM-GYRVLGIDGGEGKEELFRSIGGEVFIDFTKEK 225

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 30/234 (12%)
Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDF----PAVPGCDM 65
           +GP + L+L ++P+P P  +++L+++ +  +   D    Q      DF    P V G + 
Sbjct: 13  HGPGD-LRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRI-GDFVVKKPMVLGHEA 70
Query: 66  AGIVVAKGTSVTKFNTGDEV------------YGNIQDFNAEGKL------KQLGALAEF 107
           +G VV  G+ V     GD V            +  I  +N    +         G L  F
Sbjct: 71  SGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRF 130
Query: 108 IVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVI 166
                +   K P N++FEE A + PL+V   I   + AG   G  + + G AG +G LV 
Sbjct: 131 YKHNANFCYKLPDNVTFEEGALIEPLSV--GIHACRRAGVTLGNKVLVCG-AGPIG-LVN 186
Query: 167 QLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDT 219
            LA    GA+ VV T  S  ++   KE+GAD +++      E+I +K + L  +
Sbjct: 187 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGLLGS 240

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMA 66
           +GP + L+L ++P+P P  +++L+++ +  +   D    +      F    P V G + +
Sbjct: 14  HGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEAS 72
Query: 67  GIVVAKGTSVTKFNTGDEV------------YGNIQDFNAEGKL------KQLGALAEFI 108
           G V   G+SV     GD V            +  +  +N    +         G L  F 
Sbjct: 73  GTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFY 132
Query: 109 VVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQ 167
               +   K P N++FEE A + PL+V   I   +  G   G  + + G AG +G + + 
Sbjct: 133 KHNAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-AGPIGMVTLL 189
Query: 168 LAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD 214
           +AK    A  VV   S  ++   KE+GAD V+   K   ++I  K +
Sbjct: 190 VAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 51/228 (22%)
Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP-- 61
           A   E  G   V  +G   +P P  D LLV+V A  +   D     R L   +FP+ P  
Sbjct: 26  AVRLESVGNISVRNVG---IPEPGPDDLLVKVEACGICGTD-----RHLLHGEFPSTPPV 77
Query: 62  --GCDMAGIVVAKGTSVTKFNTGDEVYGN------------------IQDFNAEGKLKQL 101
             G +  GIVV  G++V     G  + G+                   ++  A G + + 
Sbjct: 78  TLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIG-IHRD 136
Query: 102 GALAEFIVVEESLIAKKPKNISFEEAASL---------PLAVQTAIEGFKTAGFKTGQTI 152
           G  AE+++V        P+  +FE   +L         PLA    + G   +G K G T+
Sbjct: 137 GGFAEYVLV--------PRKQAFEIPLTLDPVHGAFCEPLA--CCLHGVDLSGIKAGSTV 186
Query: 153 FIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200
            I+GG G +G L +QLA+     + +++T    K    +E+GA   +D
Sbjct: 187 AILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVD 233

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMA 66
           +GP + L+L ++P+P P  +++L++  +  +   D    +      F    P V G + +
Sbjct: 14  HGPGD-LRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHEAS 72
Query: 67  GIVVAKGTSVTKFNTGDEVY------GNIQDFNAEGKLK------------QLGALAEFI 108
           G V   G+SV     GD V           +F   G+                G L  F 
Sbjct: 73  GTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPDDGNLCRFY 132
Query: 109 VVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQ 167
               +   K P N++FEE A + PL+V   I   +  G   G  + + G AG +G + + 
Sbjct: 133 KHNAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-AGPIGXVTLL 189
Query: 168 LAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD 214
           +AK    A  VV   S  ++   KE+GAD V+   K   ++I  K +
Sbjct: 190 VAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 25  TPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81
           +P   Q+ ++  A  +N +D+  R     PL   + P V G + A +V   G  VT F  
Sbjct: 25  SPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTV 84
Query: 82  GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEA--ASLPLAVQTAIE 139
           G+ V            L  LGA ++  +     + K PK++  ++   A L L   TA  
Sbjct: 85  GERVCTC---------LPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQY 135
Query: 140 GF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV 198
              +T   K G  + I   AGG+G +++  A+H  GA+ +   ++  K E  ++LG    
Sbjct: 136 LLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKLGCHHT 194
Query: 199 IDYRKTKYEDIEEKF------DVLYDTIG 221
           I+Y    + ++  +       DV+YD+IG
Sbjct: 195 INYSTQDFAEVVREITGGKGVDVVYDSIG 223

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 20  DFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP-GCDMAGIVVAKGTSVT- 77
           D P+P P    LLV+ R   +N  D         PS  P    G +  G VVA G S + 
Sbjct: 45  DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASA 104
Query: 78  KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA 137
           ++  G  V                G+ AE+ VV  S+    P      E  +L ++  TA
Sbjct: 105 RYTVGQAV-----------AYMAPGSFAEYTVVPASIATPVPS--VKPEYLTLLVSGTTA 151
Query: 138 IEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFVKELGA 195
               K   G   G+ + +   AGG G   +QL+K      HV+ T S+  K  F+K LG 
Sbjct: 152 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKK--AKCHVIGTCSSDEKSAFLKSLGC 209
Query: 196 DKVIDYRKTKY-----EDIEEKFDVLYDTIG 221
           D+ I+Y+         ++  E  DV+Y+++G
Sbjct: 210 DRPINYKTEPVGTVLKQEYPEGVDVVYESVG 240

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 20  DFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP-GCDMAGIVVAKGTSVT- 77
           D P+P P    LLV+ R   +N  D         PS  P    G +  G VVA G S + 
Sbjct: 24  DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASA 83
Query: 78  KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA 137
           ++  G  V                G+ AE+ VV  S+    P      E  +L ++  TA
Sbjct: 84  RYTVGQAV-----------AYMAPGSFAEYTVVPASIATPVPS--VKPEYLTLLVSGTTA 130
Query: 138 IEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFVKELGA 195
               K   G   G+ + +   AGG G   +QL+K      HV+ T S+  K  F+K LG 
Sbjct: 131 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKK--AKCHVIGTCSSDEKSAFLKSLGC 188
Query: 196 DKVIDYRKTKY-----EDIEEKFDVLYDTIG 221
           D+ I+Y+         ++  E  DV+Y+++G
Sbjct: 189 DRPINYKTEPVGTVLKQEYPEGVDVVYESVG 219

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 20  DFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP-GCDMAGIVVAKGTSVT- 77
           D P+P P    LLV+ R   +N  D         PS  P    G +  G VVA G S + 
Sbjct: 53  DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASA 112
Query: 78  KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA 137
           ++  G  V                G+ AE+ VV  S+    P      E  +L ++  TA
Sbjct: 113 RYTVGQAV-----------AYMAPGSFAEYTVVPASIATPVPS--VKPEYLTLLVSGTTA 159
Query: 138 IEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFVKELGA 195
               K   G   G+ + +   AGG G   +QL+K      HV+ T S+  K  F+K LG 
Sbjct: 160 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKK--AKCHVIGTCSSDEKSAFLKSLGC 217
Query: 196 DKVIDYRKTKY-----EDIEEKFDVLYDTIG 221
           D+ I+Y+         ++  E  DV+Y+++G
Sbjct: 218 DRPINYKTEPVGTVLKQEYPEGVDVVYESVG 248

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 142/344 (41%), Gaps = 65/344 (18%)
Query: 14  EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDF--PAVPGCDMAGIVVA 71
           E L + D  +P PQ +++L+++  A +   D +  +       F  P + G + AG +V 
Sbjct: 14  EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVE 73
Query: 72  KGTSVTKFNTGDEV--YGNIQDFNA----EGKLK----QL-------GALAEFIVVEESL 114
            G  + K   GD V  Y    D       EGK      Q+       G  +E+++V+ S 
Sbjct: 74  VG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSR 132
Query: 115 IAKKPKNISFEEAASLPLAVQTAIEGFKTAG---FKTGQTIFIVGGAGGVGTLVIQLAKH 171
              K  ++S  EAA L  A  T++   + A     K  + + IV G GG+    IQ+ K 
Sbjct: 133 WLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKA 192
Query: 172 FYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGDCK 224
                 +V  + + K  +F  ELGAD V + +    E +  K        +  D +G  +
Sbjct: 193 LMKNITIVGISRSKKHRDFALELGADYVSEMKDA--ESLINKLTDGLGASIAIDLVGTEE 250
Query: 225 NSF----VVAKDNAPIV--------------DITWPPSHPRAIYSSLTVSGEILEKLRPF 266
            ++    ++A++ A I+                 W      + Y SL      LE +   
Sbjct: 251 TTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLND----LEDVVRL 306
Query: 267 IESGKLKAQIDPTGPYKFK----DVIEAFRYLETGRARGKVVIS 306
            ESGK+K       PY  K    D+ +AF  L+ GR  G+ VI+
Sbjct: 307 SESGKIK-------PYIIKVPLDDINKAFTNLDEGRVDGRQVIT 343

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 102 GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTG--QTIFIVGGAG 159
           G +AE  +V      K P  +   EA+S+  A  T  +  K +G K G  Q IF   GAG
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIF---GAG 173
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200
           G+G L IQ AK+ +GA  +    +  K+   K++GAD +I+
Sbjct: 174 GLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIIN 214

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 102 GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTG--QTIFIVGGAG 159
           G +AE  +V      K P  +   EA+S+  A  T  +  K +G K G  Q IF   GAG
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIF---GAG 173
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200
           G+G L IQ AK+ +GA  +    +  K+   K++GAD  I+
Sbjct: 174 GLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTIN 214

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 31/229 (13%)
Query: 102 GALAEFIVVEESLIAKKPKNISFE---EAASLPLAVQTAIEGFKTAG--FKTGQTIFIVG 156
           G  AEF+      + K PK+IS E   E A L  A  TA    K A      G  + IVG
Sbjct: 135 GGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVG 194
Query: 157 GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE----- 211
             GG+G + +QL K    A+ +       K++  + LGAD V+D R+   + + E     
Sbjct: 195 -VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGR 253
Query: 212 KFDVLYDTIGDCKNS----FVVAKDNAPIV-----DITWPPSHPRAIYSSLTVSGEI--- 259
             +V  D +G         +++ +    I+     ++ +P    R I S ++  G +   
Sbjct: 254 GVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGGELRFPTI--RVISSEVSFEGSLVGN 311
Query: 260 ---LEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
              L +L      GK++ ++D    +K  ++ +    LE G   G+ V+
Sbjct: 312 YVELHELVTLALQGKVRVEVD---IHKLDEINDVLERLEKGEVLGRAVL 357

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 87/217 (40%), Gaps = 42/217 (19%)
Query: 26  PQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV 85
           PQ D++LV+V A  +   D   R +  +P   PAV G + +GI+ A G +VT+   GD V
Sbjct: 29  PQGDEVLVKVVATGMCHTDLIVRDQK-YPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHV 87
Query: 86  ---YG----------------------NIQDFNAEGKLKQL--------------GALAE 106
              YG                      N    ++EG                    + A 
Sbjct: 88  VLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFAT 147
Query: 107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVI 166
           + +  E+   K  K++  E    L   +QT       A   T  + F+  GAG VG L  
Sbjct: 148 YALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVG-LSA 206
Query: 167 QLAKHFYGASHVVATTST-PKVEFVKELGADKVIDYR 202
            LA    GAS ++A      ++E  K+LGA  VI+ +
Sbjct: 207 LLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK 243

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 16/201 (7%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
           G   EF  V ++   +A  PK I  E A  +P  + T   G + A  + G ++ ++ G G
Sbjct: 118 GVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
            VG + I  AK   GA  ++   S P  VE  K  GA  +++Y+     D      V+  
Sbjct: 177 AVGLMGIAGAK-LRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVD-----QVMKL 230
Query: 219 TIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESG------KL 272
           T G   +  ++A   +  +        P  I S++   G     L P +E G       +
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTI 290
Query: 273 KAQIDPTGPYKFKDVIEAFRY 293
           K  + P G  + + +I+   Y
Sbjct: 291 KGGLCPGGRLRMERLIDLVFY 311

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 23/220 (10%)
Query: 4   AWYYEEYG-PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRP--LFPSDFPAV 60
           A  Y  +G P +V++L +  L   +   + V++ AA +NP D    Q    L P + PAV
Sbjct: 16  ALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLP-ELPAV 74
Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
            G +    VVA G++VT    GD V   I      G  +      E +  EE+LI + P 
Sbjct: 75  GGNEGVAQVVAVGSNVTGLKPGDWV---IPANAGLGTWR-----TEAVFSEEALI-QVPS 125
Query: 121 NISFEEAASL---PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           +I  + AA+L   P      +  F+    + G ++       GVG  VIQ+A    G   
Sbjct: 126 DIPLQSAATLGVNPCTAYRMLMDFEQ--LQPGDSVIQNASNSGVGQAVIQIAAAL-GLRT 182
Query: 178 VVATTSTPKVE----FVKELGADKVIDYRKTKYEDIEEKF 213
           +      P ++     +K LGA+ VI   + +  +++  F
Sbjct: 183 INVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 222

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 23/220 (10%)
Query: 4   AWYYEEYG-PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRP--LFPSDFPAV 60
           A  Y  +G P +V++L +  L   +   + V++ AA +NP D    Q    L P + PAV
Sbjct: 29  ALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLP-ELPAV 87
Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
            G +    VVA G++VT    GD V   I      G  +      E +  EE+LI + P 
Sbjct: 88  GGNEGVAQVVAVGSNVTGLKPGDWV---IPANAGLGTWR-----TEAVFSEEALI-QVPS 138
Query: 121 NISFEEAASL---PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           +I  + AA+L   P      +  F+    + G ++       GVG  VIQ+A    G   
Sbjct: 139 DIPLQSAATLGVNPCTAYRMLMDFEQ--LQPGDSVIQNASNSGVGQAVIQIAAAL-GLRT 195
Query: 178 VVATTSTPKVE----FVKELGADKVIDYRKTKYEDIEEKF 213
           +      P ++     +K LGA+ VI   + +  +++  F
Sbjct: 196 INVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 235

>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 58  PAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
           P VPG D+AG+VV+  +   +F  GDEV     +      +   G  +E+  +    +  
Sbjct: 61  PFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEIG----VTHFGGYSEYARLHGEWLVP 114
Query: 118 KPKNISFEEAASLPLAVQTA---IEGFKTAGFKTGQT-IFIVGGAGGVGTLVIQ-LAKHF 172
            PK ++ +EA ++  A  TA   I   +  G    +  + + G  GGVG+L +  LAK  
Sbjct: 115 LPKGLTLKEAXAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSXLAKRG 174
Query: 173 YGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI----EEKFDVLYDTIGDCKNSFV 228
           Y      +T    + ++++ LGA +V+       E I    ++++    D +G    + V
Sbjct: 175 YTVE--ASTGKAAEHDYLRVLGAKEVLAREDVXAERIRPLDKQRWAAAVDPVGGRTLATV 232
Query: 229 VAKDNAPIVDITWPPSHPRAI-YSSLTVSGEILEKLRPFIESGKLKAQID 277
           +++             +  A+  S LT   E+   + PFI  G     ID
Sbjct: 233 LSRXR-----------YGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGID 271

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 16/201 (7%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
           G   EF  V ++   +A  PK I  E A  +P  + T   G + A  + G ++ ++ G G
Sbjct: 118 GVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
            VG + I  AK   GA  ++   S P  VE  K  GA  +++Y+     D      V+  
Sbjct: 177 AVGLMGIAGAK-LRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVD-----QVMKL 230
Query: 219 TIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESG------KL 272
           T G   +  ++A   +  +        P  I S++   G     L P +E G       +
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTI 290
Query: 273 KAQIDPTGPYKFKDVIEAFRY 293
           K  + P G  + + +I+   Y
Sbjct: 291 KGGLCPGGRLRMERLIDLVFY 311

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 43/219 (19%)
Query: 12  PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID---------SKRRQRPLFPSDFPAVPG 62
           P+E L L D P+P P   ++LV+V AA++   D         ++ R RP      P V G
Sbjct: 9   PEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRP------PLVTG 62
Query: 63  CDMAGIVVAKGTSVTKFNTGDEVY---------------GNIQ-DFNAE-GKLKQLGALA 105
            + +G+V A G  V +   GD V                GN     N +   + + G  A
Sbjct: 63  HEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFA 122
Query: 106 EFIVVEESLIAKKPKNISFEEAASL-PL--AVQTAIEGFKTAGFKTGQTIFIVGGAGGVG 162
           E++VV        PK++ FE AA L P   AV T   G       +G+++ I  GAG +G
Sbjct: 123 EYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGV----SGKSVLIT-GAGPIG 177
Query: 163 TLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVID 200
            +   + +   GA  ++ +   P ++ F +   AD++++
Sbjct: 178 LMAAMVVRA-SGAGPILVSDPNPYRLAFARPY-ADRLVN 214

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 133/339 (39%), Gaps = 55/339 (16%)
Query: 16  LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--------FPSDFPAVPGCDMAG 67
           L L +  +P P+  Q+L++V AA +   D   RQ                P   G ++AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 68  IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
            +   G  V  ++ GD V   +  +  EG                        GA AE++
Sbjct: 73  KIEEVGDEVVGYSKGDLV--AVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYV 130
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           +V       K + ++  EAA L  +  T     + A     +T+ +VG  GG+GT+ +Q+
Sbjct: 131 IVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQI 190
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID----------YRKTKYEDIEEKFDVLYD 218
           AK   GA+ +        VE  K  GAD VI+           R T+ + ++   D+ Y 
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYS 250
Query: 219 TIGDCKNSFVVAKDNAPIV------DITWPPSHPRAIYSSLTVSGEILEKLRPFI----- 267
                     +AK    ++      D+ +    P    S +   G ++     F+     
Sbjct: 251 EKTLSVYPKALAKQGKYVMVGLFGADLHY--HAPLITLSEIQFVGSLVGNQSDFLGIMRL 308
Query: 268 -ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            E+GK+K  I  T   K ++  EA   LE  +A G+ V+
Sbjct: 309 AEAGKVKPMITKT--MKLEEANEAIDNLENFKAIGRQVL 345

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 132/339 (38%), Gaps = 55/339 (16%)
Query: 16  LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--------FPSDFPAVPGCDMAG 67
           L L +  +P P+  Q+L++V AA +   D   RQ                P   G ++AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 68  IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
            +   G  V  ++ GD V   +     EG                        GA AE++
Sbjct: 73  KIEEVGDEVVGYSKGDLV--AVNPLQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYV 130
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           +V       K + ++  EAA L  +  T     + A     +T+ +VG  GG+GT+ +Q+
Sbjct: 131 IVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQI 190
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID----------YRKTKYEDIEEKFDVLYD 218
           AK   GA+ +        VE  K  GAD VI+           R T+ + ++   D+ Y 
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYS 250
Query: 219 TIGDCKNSFVVAKDNAPIV------DITWPPSHPRAIYSSLTVSGEILEKLRPFI----- 267
                     +AK    ++      D+ +    P    S +   G ++     F+     
Sbjct: 251 EKTLSVYPKALAKQGKYVMVGLFGADLHY--HAPLITLSEIQFVGSLVGNQSDFLGIMRL 308
Query: 268 -ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            E+GK+K  I  T   K ++  EA   LE  +A G+ V+
Sbjct: 309 AEAGKVKPMITKT--MKLEEANEAIDNLENFKAIGRQVL 345

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 29/212 (13%)
Query: 16  LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--------FPSDFPAVPGCDMAG 67
           L L +  +P P+  Q+L++V AA +   D   RQ                P   G ++AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 68  IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
            +   G  V  ++ GD V   +  +  EG                        GA AE++
Sbjct: 73  KIEEVGDEVVGYSKGDLV--AVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYV 130
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           +V       K + ++  EAA L  +  T     + A     +T+ +VG  GG+GT+ +Q+
Sbjct: 131 IVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQI 190
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID 200
           AK   GA+ +        VE  K  GAD VI+
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVIN 222

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 82/204 (40%), Gaps = 40/204 (19%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
           G  +E   V E+   +A  P++I  E+A  L   V T   G + A  K G T+ ++ G G
Sbjct: 118 GVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
            VG + +  A H  GA  + A  S     +   E GA  +I+Y   K  DI E+  +L  
Sbjct: 177 PVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGATDIINY---KNGDIVEQ--ILKA 230
Query: 219 TIGDCKNSFVVA----------------------------KDNAPIVDITWPPSHP-RAI 249
           T G   +  V+A                             DN PI    W      + I
Sbjct: 231 TDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKHI 290
Query: 250 YSSLTVSGEI-LEKLRPFIESGKL 272
           +  LT  G + +EKL   I +GKL
Sbjct: 291 HGGLTPGGRVRMEKLASLISTGKL 314

>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 33/205 (16%)
Query: 2   QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP 61
             AW  +  G    L+L D P P  +  +++++V A  LN  D   R             
Sbjct: 1   MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRL------------ 46
Query: 62  GCDMAGIVVAKGTSVTK----FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
                      G  +T+    F  G EV G ++       + Q G LAE + V +  +  
Sbjct: 47  -----------GAYLTRLHPPFIPGMEVVGVVEGRRYAALVPQ-GGLAERVAVPKGALLP 94
Query: 118 KPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
            P+ +S EEAA+ P++  TA    K A  + G+ + +   AG +GT  +Q+A+       
Sbjct: 95  LPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAM--GLR 152
Query: 178 VVATTSTP-KVEFVKELGADKVIDY 201
           V+A  S P K+     LGA++   Y
Sbjct: 153 VLAAASRPEKLALPLALGAEEAATY 177

>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 33/205 (16%)
Query: 2   QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP 61
             AW  +  G    L+L D P P  +  +++++V A  LN  D   R             
Sbjct: 1   MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRL------------ 46
Query: 62  GCDMAGIVVAKGTSVTK----FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
                      G  +T+    F  G EV G ++       + Q G LAE + V +  +  
Sbjct: 47  -----------GAYLTRLHPPFIPGMEVVGVVEGRRYAALVPQ-GGLAERVAVPKGALLP 94
Query: 118 KPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
            P+ +S EEAA+ P++  TA    K A  + G+ + +   AG +GT  +Q+A+       
Sbjct: 95  LPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAM--GLR 152
Query: 178 VVATTSTP-KVEFVKELGADKVIDY 201
           V+A  S P K+     LGA++   Y
Sbjct: 153 VLAAASRPEKLALPLALGAEEAATY 177

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 39/212 (18%)
Query: 17  KLGDFPLPTPQHDQLLVQVRAAALNPID---------SKRRQRPLFPSDFPAVPGCDMAG 67
           +L +  +P P   ++L++V A ++   D         ++ R +P      P + G ++AG
Sbjct: 17  ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP------PQIXGHEVAG 70
Query: 68  IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
            VV  G  V     GD  Y +++     GK                       G  AE+ 
Sbjct: 71  EVVEIGPGVEGIEVGD--YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYA 128
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           VV    I K PK+I   E A+L   +  A++    AG  +G+++ I G AG +G L I +
Sbjct: 129 VVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPISGKSVLITG-AGPLGLLGIAV 185
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID 200
           AK       +V+  S  + E  K++GAD VI+
Sbjct: 186 AKASGAYPVIVSEPSDFRRELAKKVGADYVIN 217

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 39/212 (18%)
Query: 17  KLGDFPLPTPQHDQLLVQVRAAALNPID---------SKRRQRPLFPSDFPAVPGCDMAG 67
           +L +  +P P   ++L++V A ++   D         ++ R +P      P + G ++AG
Sbjct: 18  ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP------PQIXGHEVAG 71
Query: 68  IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
            VV  G  V     GD  Y +++     GK                       G  AE+ 
Sbjct: 72  EVVEIGPGVEGIEVGD--YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYA 129
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           VV    I K PK+I   E A+L   +  A++    AG  +G+++ I G AG +G L I +
Sbjct: 130 VVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPISGKSVLITG-AGPLGLLGIAV 186
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID 200
           AK       +V+  S  + E  K++GAD VI+
Sbjct: 187 AKASGAYPVIVSEPSDFRRELAKKVGADYVIN 218

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
           G   EF  V ++   +A  PK I  E A  +P  + T   G + A  K G T+ ++ G G
Sbjct: 118 GVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
            VG + +  A H  GA  + A  S     +   E GA  +I+Y   K  DI E+  +L  
Sbjct: 177 PVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGATDIINY---KNGDIVEQ--ILKA 230
Query: 219 TIGDCKNSFVVA 230
           T G   +  V+A
Sbjct: 231 TDGKGVDKVVIA 242

>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh Length = 345

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 56  DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLI 115
           +FP +PG D AG V  + +   +F+ G EV                G LAE   V+   +
Sbjct: 77  NFPMIPGIDFAGTV--RTSEDPRFHAGQEVLLTGWGVGE----NHWGGLAEQARVKGDWL 130
Query: 116 AKKPKNISFEEAASLPLAVQTA---IEGFKTAGFK-TGQTIFIVGGAGGVGTLVIQLAKH 171
              P+ +   +A  +  A  TA   +   + AG +     I + G +GGVG+  + L  H
Sbjct: 131 VAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALL-H 189
Query: 172 FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK--FDVLYDTIGDCKNSFVV 229
             G   V  +      E++K LGA +V+   +       EK  +    DT+GD   + V+
Sbjct: 190 KLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVL 249
Query: 230 AKDN 233
           A+ N
Sbjct: 250 AQMN 253

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 112 ESLIAKKPKNISFEEA-ASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLA 169
           E L+ + P  I    A  ++ +   TA  G  +  G K G+T+ +   AG VG++V Q+A
Sbjct: 123 EKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIA 182
Query: 170 KHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK--------FDVLYDTIG 221
           K   G   V A  S  KV ++++LG D V +Y+    E +EE         +D  +D +G
Sbjct: 183 K-LKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTV--ESLEETLKKASPDGYDCYFDNVG 239

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 112 ESLIAKKPKNISFEEA-ASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLA 169
           E L+ + P  I    A  ++ +   TA  G  +  G K G+T+ +   AG VG++V Q+A
Sbjct: 102 EKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIA 161
Query: 170 KHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK--------FDVLYDTIG 221
           K   G   V A  S  KV ++++LG D V +Y+    E +EE         +D  +D +G
Sbjct: 162 K-LKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTV--ESLEETLKKASPDGYDCYFDNVG 218

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 39/201 (19%)
Query: 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200
            +  G K G+T+ +   AG VG++V Q+AK   G   V A  S  K+ ++K++G D   +
Sbjct: 138 LEVCGVKGGETVLVSAAAGAVGSVVGQIAK-LKGCKVVGAAGSDEKIAYLKQIGFDAAFN 196
Query: 201 YRKTKYEDIEEK--------FDVLYDTIGDCKNSFVVA--KDNAPI-----------VDI 239
           Y+      +EE         +D  +D +G    + V++  KD   I           +D 
Sbjct: 197 YKTV--NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQ 254
Query: 240 TWP-PSHPRAIYSSLTVSGEI------------LEKLRPFIESGKLKAQIDPTGPYKFKD 286
             P PS    IY  L + G I            L  L  ++  GK++     T    F++
Sbjct: 255 LPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVT--KGFEN 312
Query: 287 VIEAFRYLETGRARGKVVISA 307
           +  AF  +  G   GK V++A
Sbjct: 313 MPAAFIEMLNGANLGKAVVTA 333

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 23  LPTPQHDQLLVQVRAAALNPIDSK--RRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80
           +PTP   ++ V+V+ A +   DS   R   P   + +P V G +  G++ A G  V    
Sbjct: 39  IPTPSAGEVRVKVKLAGICGSDSHIYRGHNPF--AKYPRVIGHEFFGVIDAVGEGVESAR 96
Query: 81  TGDEVY------------GNIQDFNAEGKLKQLG-----ALAEFIVVEESLIAKKPKNIS 123
            G+ V              +I   N    L  LG       +E+ VV      K P+ ++
Sbjct: 97  VGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEYAVVPAKNAWKIPEAVA 156
Query: 124 FEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV-VAT 181
            + A  + P  +   + G    G  T     +V GAG +G  ++Q+ K  Y   +V VA 
Sbjct: 157 DQYAVMIEPFTIAANVTGH---GQPTENDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVAD 213
Query: 182 TSTPKVEFVKELGADKVIDYRKT 204
               ++E  KE GAD  I+  +T
Sbjct: 214 RIDERLEKAKESGADWAINNSQT 236

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
           G   E+  V ++   +A  PK++  E A  +   + T   G + A  + G ++ ++ G G
Sbjct: 118 GVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
            VG + I  AK   GA  ++   S P  VE  K  GA  +++Y+    ED      V+  
Sbjct: 177 AVGLMGIAGAK-LRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIED-----QVMKL 230
Query: 219 TIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESG 270
           T G   +  ++A   +  +        P  I S++   G     L P +E G
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWG 282

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 88/236 (37%), Gaps = 29/236 (12%)
Query: 2   QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--FPSDFPA 59
             A  Y E G + V+   D P PTP   ++L++V AA L   D      P   +    P 
Sbjct: 1   MKAVQYTEIGSEPVVV--DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPL 58
Query: 60  VPGCDMAGIVVAKGTSVTKFNTGD--EVYG----NIQDFNAEGK---------------- 97
             G +  G V   G  VT F  GD   VYG          A G+                
Sbjct: 59  TLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPG 118
Query: 98  LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA--GFKTGQTIFIV 155
           L   G++AE+++V+ +       ++    AA L  A  T              G T  ++
Sbjct: 119 LGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVI 178
Query: 156 GGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE 211
            G GG+G + IQ+ +    A  +       ++   +E+GAD  +       + I E
Sbjct: 179 -GVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRE 233

>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From Salmonella Enterica In Complex With Nadp Length = 324

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 15/184 (8%)
Query: 57  FPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIA 116
           FP +PG D AG V A  +   +F+ G EV                G LAE   V+   + 
Sbjct: 57  FPXIPGIDFAGTVHA--SEDPRFHAGQEVLLTGWGVGE----NHWGGLAERARVKGDWLV 110
Query: 117 KKPKNISFEEAASLPLAVQTA---IEGFKTAGFK-TGQTIFIVGGAGGVG-TLVIQLAKH 171
             P  +S   A  +  A  TA   +   + AG +     + + G +GGVG T V  L K 
Sbjct: 111 ALPAGLSSRNAXIIGTAGFTAXLCVXALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKL 170
Query: 172 FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK--FDVLYDTIGDCKNSFVV 229
            Y  + V    ST    ++K LGA++++   +       EK  +    DT+GD   + V+
Sbjct: 171 GYQVAAVSGRESTHG--YLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVL 228
Query: 230 AKDN 233
           A+ N
Sbjct: 229 AQXN 232

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 81/204 (39%), Gaps = 40/204 (19%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
           G  +E   V E+   +A  P++I  E+A  L   V T   G + A  K G T+ ++ G G
Sbjct: 118 GVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
            VG + +  A H  GA  + A  S     +   E GA  +I+Y   K  DI E+  +L  
Sbjct: 177 PVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGATDIINY---KNGDIVEQ--ILKA 230
Query: 219 TIGDCKNSFVVA----------------------------KDNAPIVDITWPPSHP-RAI 249
           T G   +  V+A                             DN  I    W      + I
Sbjct: 231 TDGKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHI 290
Query: 250 YSSLTVSGEI-LEKLRPFIESGKL 272
           +  LT  G + +EKL   I +GKL
Sbjct: 291 HGGLTPGGRVRMEKLASLISTGKL 314

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 29/212 (13%)
Query: 16  LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--------FPSDFPAVPGCDMAG 67
           L L +  +P P+  Q+L++V AA +   D   RQ                P   G ++AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 68  IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
            +   G  V  ++ GD V   +  +  EG                        GA AE++
Sbjct: 73  KIEEVGDEVVGYSKGDLV--AVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYV 130
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           +V       K + ++  EAA L  +  T     + A     +T+ +VG  GG+GT  +Q+
Sbjct: 131 IVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQI 190
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID 200
           AK   GA+ +        VE  K  GAD VI+
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVIN 222

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 10/172 (5%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
           G   E+  V ++   +A  PK++  E A  +   + T   G + A  + G ++ ++ G G
Sbjct: 118 GVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
            VG + I  AK   GA  ++   S P  VE  K  GA  +++Y+     D      V+  
Sbjct: 177 AVGLMGIAGAK-LRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVD-----QVMKL 230
Query: 219 TIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESG 270
           T G   +  ++A   +  +        P  I S++   G     L P +E G
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWG 282

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 31/209 (14%)
Query: 15  VLKLGDFPLPTPQH-DQLLVQVRAAALNPIDSKRRQRPLFPSD---FPAVPGCDMAGIVV 70
           ++++ +  +P  +H D++ V++ ++ L   D  R    +F +    +P   G + +G + 
Sbjct: 11  IVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPR----IFKNGAHYYPITLGHEFSGYID 66
Query: 71  AKGTSVTKFNTGDEV------------------YGNIQDFNAEGKLKQLGALAEFIVVEE 112
           A G+ V   + GD V                  Y     ++  G  +  G  AE+IVV+ 
Sbjct: 67  AVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRD-GGFAEYIVVKR 125
Query: 113 SLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKH 171
             +   P ++  E+ A + P+ V   +  F  A     + + I+ GAG +G L IQ A  
Sbjct: 126 KNVFALPTDMPIEDGAFIEPITV--GLHAFHLAQGCENKNVIII-GAGTIGLLAIQCAVA 182
Query: 172 FYGASHVVATTSTPKVEFVKELGADKVID 200
               S      S+ K+   K  GA +  +
Sbjct: 183 LGAKSVTAIDISSEKLALAKSFGAMQTFN 211

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 10/172 (5%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
           G   E+  V ++   +A  PK++  E A  +   + T   G + A  + G ++ ++ G G
Sbjct: 118 GVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
            VG + I  AK   GA  ++   S P  VE  K  GA  +++Y+     D      V+  
Sbjct: 177 AVGLMGIAGAK-LRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVD-----QVMKL 230
Query: 219 TIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESG 270
           T G   +  ++A   +  +        P  I S++   G     L P +E G
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWG 282

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	327
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	1e-118
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-106
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-105
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-103
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	1e-103
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	9e-99
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	3e-82
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	6e-76
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-68
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	3e-67
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	4e-67
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	3e-66
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	3e-65
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	3e-62
3gms_A	340	Putative NADPH:quinone reductase; structural genom	5e-61
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	7e-61
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	3e-59
4eye_A	342	Probable oxidoreductase; structural genomics, niai	6e-59
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	9e-58
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	3e-57
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-55
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	6e-55
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-53
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	5e-53
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-52
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	4e-51
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	9e-46
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	6e-40
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	3e-37
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-36
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	7e-35
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	1e-32
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	1e-32
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	4e-32
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-31
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	2e-31
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	2e-29
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	4e-29
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-28
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	4e-27
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	7e-26
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	8e-26
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-25
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-24
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	2e-24
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	4e-23
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	8e-23
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	2e-20
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-18
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	5e-17
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-16
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	6e-16
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	7e-16
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	9e-16
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	9e-15
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	1e-14
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	4e-14
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	7e-14
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	3e-13
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	8e-13
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	2e-12
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	4e-12
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	4e-12
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	3e-11
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	4e-11
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	3e-10
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	7e-05
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	3e-04

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  342 bits (880), Expect = e-118
 Identities = 101/321 (31%), Positives = 149/321 (46%), Gaps = 28/321 (8%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-----RPLFPSDFP 58
           A  ++++GP +VLKL D P P  + +Q+L++V AA+LNPID K R           ++ P
Sbjct: 9   AIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLP 68

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
           +  G D +G V+  G+ V   N GD+V G        G        AE++      I +K
Sbjct: 69  SGLGYDFSGEVIELGSDVNNVNIGDKVMGIA------GFPDHPCCYAEYVCASPDTIIQK 122

Query: 119 PKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
            + +SF +AASLP A  TA++    A  K G  + I  GAGGVG L IQLAK   G   V
Sbjct: 123 LEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GT-TV 180

Query: 179 VATTSTPKVEFVKELGADKVIDYRKTKYED-IEEKFDVLYDTIGD--CKNSFVVAKDNAP 235
           + T S     F+K LGA++ I+Y +  +   I    D + D +G      S    K+   
Sbjct: 181 ITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKETGC 240

Query: 236 IVDITWPPSHP----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFK 285
           IV +    +            RA       + E L  L   +   KL+ +I     ++  
Sbjct: 241 IVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEISRI--FQLS 298

Query: 286 DVIEAFRYLETGRARGKVVIS 306
           + + A   LETG  RGK+V  
Sbjct: 299 EAVTAHELLETGHVRGKLVFK 319

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  312 bits (802), Expect = e-106
 Identities = 71/327 (21%), Positives = 122/327 (37%), Gaps = 40/327 (12%)

Query: 4   AWYYEEYGPK-EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPG 62
                 Y  K   + L    +P    D +LVQ +A  +NP+D K  +          VPG
Sbjct: 4   QHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPG 63

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNI 122
            D AG++V  G  V     G  V  +         LK+ G+ AEF V+    +   P N+
Sbjct: 64  VDGAGVIVKVGAKVDSKMLGRRVAYH-------TSLKRHGSFAEFTVLNTDRVMTLPDNL 116

Query: 123 SFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
           SFE AA+LP  + TA + F+       + + I  G G V  L+ Q+  +  G   V   +
Sbjct: 117 SFERAAALPCPLLTAWQAFEKIPLTKQREVLI-VGFGAVNNLLTQMLNNA-GY-VVDLVS 173

Query: 183 STPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--KNSFVVAKDNAPIVDIT 240
           ++       + G   +          + +K+  ++D +            K N  I+ I 
Sbjct: 174 ASLSQALAAKRGVRHLYREP----SQVTQKYFAIFDAVNSQNAAALVPSLKANGHIICIQ 229

Query: 241 WPPSHPRAIYSSLTVS---------------------GEILEKLRPFIESGKLKAQIDPT 279
                P     + T+S                      +  E L   I  GK++      
Sbjct: 230 DRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDI 289

Query: 280 GPYKFKDVIEAFRYLETGRARGKVVIS 306
             ++F+ +IEA  + E  + +  + ++
Sbjct: 290 --FRFEQMIEALDHSEQTKLKTVLTLN 314

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  310 bits (797), Expect = e-105
 Identities = 101/347 (29%), Positives = 147/347 (42%), Gaps = 46/347 (13%)

Query: 4   AWYYEEYGP---KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAV 60
           A  Y +  P      L   + P P P    +LV+V+A ++NP+D K R+          V
Sbjct: 25  AVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKV 84

Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
            G D AGIV A G  VT F  GDEV+         G + + G  AEF +V+E ++ +KPK
Sbjct: 85  IGYDAAGIVSAVGPDVTLFRPGDEVFYA-------GSIIRPGTNAEFHLVDERIVGRKPK 137

Query: 121 NISFEEAASLPLAVQTAIE------GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
            + + EAA+LPL   TA E                  I IVGGAGGVG++ +Q+A+    
Sbjct: 138 TLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTD 197

Query: 175 ASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK-----FDVLYDTIGD--CKNS 226
              V+AT S P   E+VK LGA  VID+ K    ++          V   T  D      
Sbjct: 198 L-TVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEI 256

Query: 227 FVVAKDNAPIVDITWPPSHPRAIYSSLTVS--------------------GEILEKLRPF 266
             +         I  P +    ++    VS                    G +L  +   
Sbjct: 257 ADLIAPQGRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRL 316

Query: 267 IESGKLKAQIDPT-GPYKFKDVIEAFRYLETGRARGKVVISAFPYTE 312
           ++ G+L+  +     P    ++ +A   +E+G ARGKVVI  F    
Sbjct: 317 VDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFGLQR 363

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  306 bits (786), Expect = e-103
 Identities = 103/364 (28%), Positives = 162/364 (44%), Gaps = 70/364 (19%)

Query: 1   MQNAWYYEEYGPKEVLKLG-DFPLPTPQH-DQLLVQVRAAALNPIDSKRRQ--------- 49
              AW  ++YG  EVL+   +  +P   + ++++V+V AA++NPID   R          
Sbjct: 22  SM-AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNM 80

Query: 50  ------RPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGA 103
                   +   +FP   G D++G+V+  G  V  F  GDEV+  +  +         G 
Sbjct: 81  KRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQ-------GT 133

Query: 104 LAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAG-----FKTGQTIFIVGGA 158
           L+EF+VV  + ++ KPK+++  +AASLP    TA       G       TG+ + I+G +
Sbjct: 134 LSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGAS 193

Query: 159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDV 215
           GGVGT  IQ+ K +  A HV A  S    E V++LGAD VIDY+    E+     + FD 
Sbjct: 194 GGVGTFAIQVMKAW-DA-HVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDF 251

Query: 216 LYDTIGD--CKNSFVVAK--DNAPIVDITWPPSHP------------------------- 246
           + D +G      +    K    A  V +  P                             
Sbjct: 252 ILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHF 311

Query: 247 ----RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGK 302
                  ++    SG  L+ +   +++GK++  I+ T  + F  V EAF  +E G ARGK
Sbjct: 312 WKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQT--FPFSKVPEAFLKVERGHARGK 369

Query: 303 VVIS 306
            VI+
Sbjct: 370 TVIN 373

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  304 bits (781), Expect = e-103
 Identities = 93/343 (27%), Positives = 155/343 (45%), Gaps = 51/343 (14%)

Query: 4   AWYYEEYGP---KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAV 60
           A  +E+        + K  +  +P P+  ++LV++++ ++NP+D+K+R      S  P V
Sbjct: 5   AIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRV 62

Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
            G D  G+V + G  VT FN GD VY +       G   Q G+ AE+ ++ E L+AK PK
Sbjct: 63  LGFDAIGVVESVGNEVTMFNQGDIVYYS-------GSPDQNGSNAEYQLINERLVAKAPK 115

Query: 121 NISFEEAASLPLAVQTAIEG-FKTAGF------KTGQTIFIVGGAGGVGTLVIQLAKHFY 173
           NIS E+A SLPL   TA E  F   G         G+T+ I+ GAGGVG++  Q+AK + 
Sbjct: 116 NISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAY- 174

Query: 174 GASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIE----EKFDVLYDTIGD---CKN 225
           G   V+ T S    +E+ K++GAD V++++++     +    E  D ++ T        +
Sbjct: 175 GL-RVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYYDD 233

Query: 226 SFVVAKDNAPIVDITWPPS---------------------HPRAIYSSLTVSGEILEKLR 264
              + K    I  I    +                      P      +    E LE + 
Sbjct: 234 MIQLVKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDIT 293

Query: 265 PFIESGKLKAQIDPT-GPYKFKDVIEAFRYLETGRARGKVVIS 306
             +E    +            +++ +A + LE+    GK+VI+
Sbjct: 294 NKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVIN 336

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  294 bits (754), Expect = 9e-99
 Identities = 104/338 (30%), Positives = 151/338 (44%), Gaps = 43/338 (12%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQR--PLFPSDFP 58
           M  A   EE     VL+      P P   Q+LVQ+ A+  NP+D+K R    P      P
Sbjct: 8   MI-AAVVEEANGPFVLR--KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLP 64

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
           A+ G D+AG VVA G  V  F  GD V+G        G     G  A+F  V+  L+A K
Sbjct: 65  AILGMDLAGTVVAVGPEVDSFRVGDAVFGL-----TGGVGGLQGTHAQFAAVDARLLASK 119

Query: 119 PKNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           P  ++  +A+ LPL   TA EG    A  + GQT+ I GG GGVG + IQ+A    GA  
Sbjct: 120 PAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALAR-GA-R 177

Query: 178 VVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK----FDVLYDTIGD--CKNSFVVAK 231
           V AT     +E+V++LGA  +   R+ +    E      FD++YDT+G      SF   K
Sbjct: 178 VFATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVK 237

Query: 232 DNAPIVDITWPPSH-------------------PRAIYSSLTVSGEILEKLRPFIESGKL 272
               +V      +H                          L   GE+L +    +++GKL
Sbjct: 238 RFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKL 297

Query: 273 KAQIDPTGPYKFKDVIEAFRYL----ETGRARGKVVIS 306
             ++DP   +   ++  A+  +    +  R RGK+ I+
Sbjct: 298 APRLDPR-TFSIAEIGSAYDAVLGRNDVPRQRGKIAIT 334

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  252 bits (646), Expect = 3e-82
 Identities = 80/358 (22%), Positives = 129/358 (36%), Gaps = 61/358 (17%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAV 60
            Q A    ++    V      P P    DQ+ V+V A A+NP D+  R +   P    A 
Sbjct: 11  QQTALTVNDHDEVTVWN--AAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFATP---WAF 65

Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
            G D AG VVA G+ VT    GD VYG   +     +    GA +++ V    + AK PK
Sbjct: 66  LGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMC--PRTPDQGAFSQYTVTRGRVWAKIPK 123

Query: 121 NISFEEAASLPLAVQTAIEGFKTAGF-------------KTGQTIFIVGGAGGVGTLVIQ 167
            +SFE+AA+LP  + TA    K  G                   + + GG+    T+ +Q
Sbjct: 124 GLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQ 183

Query: 168 LAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY-EDIEE----KFDVLYDTIGD 222
           + +   G    +AT S    +  K  GA++V DYR     + I            D I +
Sbjct: 184 MLRL-SGY-IPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241

Query: 223 CKN----SFVVAKDNAPIVDITWPPSH---PRAIYSSLTVSG------------------ 257
            ++       + +     V +   P H    + + +  T+                    
Sbjct: 242 VESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGS 301

Query: 258 --------EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARG-KVVIS 306
                   ++       +E G+L           F  + +    +  G   G K+V+ 
Sbjct: 302 EEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVR 359

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  235 bits (602), Expect = 6e-76
 Identities = 97/349 (27%), Positives = 145/349 (41%), Gaps = 51/349 (14%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFPA 59
           M+ A      G  EVL++ D P+P P   ++ V+++AAALN +D   R+         P 
Sbjct: 1   MR-AVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPH 59

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-----------------G 102
           V G D +G+V A G  V  F  GDEV  N        +                     G
Sbjct: 60  VLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHG 119

Query: 103 ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGV 161
             AE++V+ E+ +A KPKN+SFEEAA++PL   TA +      G + G  + ++    GV
Sbjct: 120 TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGV 179

Query: 162 GTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK-------- 212
               IQ+AK F GA  V+AT  +  K+   K LGAD+ ++Y      D  ++        
Sbjct: 180 SVAAIQIAKLF-GA-RVIATAGSEDKLRRAKALGADETVNYTH---PDWPKEVRRLTGGK 234

Query: 213 -FDVLYDTIGDC--KNSFVVAKDNAPIVDI-----TWPPSHPRAIYS-SLTVSG------ 257
             D + D  G    +       +   I                 ++   L++ G      
Sbjct: 235 GADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASK 294

Query: 258 EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
             L  +  F+E GKLK  +        +   E  R LE  R  GKVV+ 
Sbjct: 295 SRLFPILRFVEEGKLKPVVGQV--LPLEAAAEGHRLLEERRVFGKVVLQ 341

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  216 bits (553), Expect = 2e-68
 Identities = 98/345 (28%), Positives = 140/345 (40%), Gaps = 51/345 (14%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFPA 59
           MQ  W  E   P   LKL + P+P      ++V+  A +LN  D    +        FP 
Sbjct: 28  MQ-EWSTETVAP-HDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPF 85

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEV---------YGNIQDFNAEGKLKQL-----GALA 105
           VP  DM+G+V A G SVT+F  GD V          G           + L     G L+
Sbjct: 86  VPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLS 145

Query: 106 EFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTL 164
           E++V+ E      PK++   EA++LP A  TA     +    + G  + +  G GGV   
Sbjct: 146 EYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQ-GTGGVALF 204

Query: 165 VIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK---------FD 214
            +Q+AK   GA  V+ T+S+  K++    LGAD  I+  +   ED  E+          D
Sbjct: 205 GLQIAKAT-GA-EVIVTSSSREKLDRAFALGADHGINRLE---EDWVERVYALTGDRGAD 259

Query: 215 VLYDTIGD--CKNSFVVAKDNAPIVDI------TWPPSHPRAIYSSLTVSG------EIL 260
            + +  G      S      +  I  I               +  S  V G        L
Sbjct: 260 HILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRAL 319

Query: 261 EKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           E L   ++   LK  ID    YKF +V EA  +L+ G   GKVVI
Sbjct: 320 EDLVGAVDRLGLKPVIDMR--YKFTEVPEALAHLDRG-PFGKVVI 361

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  216 bits (553), Expect = 3e-67
 Identities = 80/381 (20%), Positives = 133/381 (34%), Gaps = 80/381 (20%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID---------------- 44
           M       +  P++ + L D P+P     + LV V A+++N                   
Sbjct: 43  MFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLE 102

Query: 45  -SKRRQRPLFPSDFP-AVPGCDMAGIVVAKGTSVTKFNTGDEVYGN-------------- 88
              R        D P  V G D+AG+V+  G  V  +  GDEV  +              
Sbjct: 103 RYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHND 162

Query: 89  ---IQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA---IEGFK 142
                +    G     G LAE  +V+ + +  KP ++S+EEAA+  L   TA   +    
Sbjct: 163 TMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRN 222

Query: 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDY 201
            AG K G  + I G +GG+G+   Q A    GA + +   S+P K E  + +GA+ +ID 
Sbjct: 223 GAGMKQGDNVLIWGASGGLGSYATQFALAG-GA-NPICVVSSPQKAEICRAMGAEAIIDR 280

Query: 202 RKTKYEDIE-----------------------EKFDVLYDTIGDC--KNSFVVAKDNAPI 236
               Y   +                       E  D++++  G      S  V +    I
Sbjct: 281 NAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTI 340

Query: 237 VDI-----TWPPSHPRAIYS-SLTVSG------EILEKLRPFIESGKLKAQIDPTGPYKF 284
                          R ++     + G          +    I  G++   +     Y  
Sbjct: 341 TTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKV--YSL 398

Query: 285 KDVIEAFRYLETGRARGKVVI 305
           +D  +A   +     +GKV +
Sbjct: 399 EDTGQAAYDVHRNLHQGKVGV 419

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  216 bits (551), Expect = 4e-67
 Identities = 85/375 (22%), Positives = 140/375 (37%), Gaps = 80/375 (21%)

Query: 7   YEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID------------------SKRR 48
             +   ++ L+LG+ P+P    D++LV V A+++N                     +++ 
Sbjct: 41  VADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQG 100

Query: 49  QRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGN-----------------IQD 91
                      V G D +G+VV  G  V ++  GD V  +                   +
Sbjct: 101 GWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTE 160

Query: 92  FNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA---IEGFKTAGFKT 148
             A G     G LAE+ VV  S +  KP ++++EEAA  PL   TA   +   + A  K 
Sbjct: 161 QRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQ 220

Query: 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYE 207
           G  + I G +GG+G+  IQ  K+  G    VA  S+  K   V+ LG D VI+  +    
Sbjct: 221 GDIVLIWGASGGLGSYAIQFVKNG-GG-IPVAVVSSAQKEAAVRALGCDLVINRAELGIT 278

Query: 208 DIE-----------------------EKFDVLYDTIGD--CKNSFVVAKDNAPIVDI--- 239
           D                          + D++++  G      S +VA+    +V     
Sbjct: 279 DDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSS 338

Query: 240 --TWPPSHPRAIYS-SLTVSG------EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEA 290
                    R ++     + G      E  +      ESG +   +     Y   +  EA
Sbjct: 339 SGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAV--YPLAEAAEA 396

Query: 291 FRYLETGRARGKVVI 305
            R ++T R  GKV +
Sbjct: 397 CRVVQTSRQVGKVAV 411

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  210 bits (538), Expect = 3e-66
 Identities = 74/337 (21%), Positives = 143/337 (42%), Gaps = 48/337 (14%)

Query: 1   MQNAWYYEEYGPKEVLKL-GDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFP 58
           +  A    E+G  EVLKL  D  +P P+  Q+L++V A  +NP+++  R          P
Sbjct: 29  LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLP 88

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
             PG D+AG++ A G + + F  GD V+ +             G  AE+ +  +  + K 
Sbjct: 89  YTPGSDVAGVIEAVGDNASAFKKGDRVFTS---------STISGGYAEYALAADHTVYKL 139

Query: 119 PKNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           P+ + F++ A++ +   TA      +A  K G+++ + G +GGVG    Q+A+ + G   
Sbjct: 140 PEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAY-GL-K 197

Query: 178 VVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF---------DVLYDTIGD--CKN 225
           ++ T  T    + V + GA +V ++R+    +  +K          D++ + + +     
Sbjct: 198 ILGTAGTEEGQKIVLQNGAHEVFNHRE---VNYIDKIKKYVGEKGIDIIIEMLANVNLSK 254

Query: 226 SFVVAKDNAPIVDI----TWPPSHPRAIYSSLTVSG------------EILEKLRPFIES 269
              +      ++ +    T   +    +    ++ G            +    L+  +E 
Sbjct: 255 DLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEI 314

Query: 270 GKLKAQIDPTGPYKFKDVIEAFR-YLETGRARGKVVI 305
           G LK  I     Y  + V EA    +    A GK+++
Sbjct: 315 GWLKPVIGSQ--YPLEKVAEAHENIIHGSGATGKMIL 349

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  208 bits (531), Expect = 3e-65
 Identities = 96/339 (28%), Positives = 153/339 (45%), Gaps = 48/339 (14%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFPA 59
           M+     + +G  +V+ +G  PLP     ++LV+  A  +N  D  +RQ     P D   
Sbjct: 29  MR-FVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASP 87

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKP 119
           + G +++G +V  G  V+ +  GD+V G          L   GA AE+ ++    I   P
Sbjct: 88  ILGLELSGEIVGVGPGVSGYAVGDKVCG----------LANGGAYAEYCLLPAGQILPFP 137

Query: 120 KNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
           K     +AA+LP    T     F+ AG   G+++ I GG  G+GT  IQLA+ F GA  V
Sbjct: 138 KGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAF-GA-EV 195

Query: 179 VATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF-----DVLYDTIGD---CKNSFVV 229
            AT  +  K E  + LGA + I+YR   +  + +       D++ D IG     +N   +
Sbjct: 196 YATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAYFERNIASL 255

Query: 230 AKD------------NAPIVDI--------TWPPSH--PRAIYSSLTVSGEILEKLRPFI 267
           AKD             A  V++        T   S   PR       +  ++L ++ P +
Sbjct: 256 AKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLL 315

Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
           E+G +   I     + F+DV +A R LE G   GKV+++
Sbjct: 316 EAGTVAPVIHKV--FAFEDVADAHRLLEEGSHVGKVMLT 352

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  200 bits (512), Expect = 3e-62
 Identities = 68/343 (19%), Positives = 114/343 (33%), Gaps = 55/343 (16%)

Query: 4   AWYYEEYG-PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFPAVP 61
           A  Y  +G P +V++L +  L   +   + V++ AA +NP D    Q       + PAV 
Sbjct: 29  ALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVG 88

Query: 62  GCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKN 121
           G +    VVA G++VT    GD V                G      V  E  + + P +
Sbjct: 89  GNEGVAQVVAVGSNVTGLKPGDWVIPANAGL---------GTWRTEAVFSEEALIQVPSD 139

Query: 122 ISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           I  + AA+L +   TA          + G ++       GVG  VIQ+A    G    + 
Sbjct: 140 IPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAAL-GL-RTIN 197

Query: 181 TTSTP-----KVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGD--CKNSF 227
                       + +K LGA+ VI   + +  +++  F       +  + +G        
Sbjct: 198 VVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELL 257

Query: 228 VVAKDNAPIVDI--------TWPPSHPRAIYSSLTVSG----------------EILEKL 263
                   +V              S    I+  L + G                E++  L
Sbjct: 258 RQLARGGTMVTYGGMAKQPVVASVSL--LIFKDLKLRGFWLSQWKKDHSPDQFKELILTL 315

Query: 264 RPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
              I  G+L A          +D   A           K +++
Sbjct: 316 CDLIRRGQLTAPACSQ--VPLQDYQSALEASMKPFISSKQILT 356

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  197 bits (502), Expect = 5e-61
 Identities = 60/348 (17%), Positives = 118/348 (33%), Gaps = 65/348 (18%)

Query: 4   AWYYEEYG-PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFPAVP 61
              + ++G PK+VL++    +   + +++ V++    +NP D              P +P
Sbjct: 7   LIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIP 66

Query: 62  GCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKN 121
           G +  GIV   G  V++   G  V            L+  G   E++      +   P +
Sbjct: 67  GYEGVGIVENVGAFVSRELIGKRVLP----------LRGEGTWQEYVKTSADFVVPIPDS 116

Query: 122 ISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           I    AA + +   TA     +T   +    + +      +G L  QL++       ++A
Sbjct: 117 IDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQIL-NF-RLIA 174

Query: 181 TTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF---------DVLYDTIGDCKNSF--- 227
            T      E +  LGA  VID        + E           D   D+IG         
Sbjct: 175 VTRNNKHTEELLRLGAAYVIDTST---APLYETVMELTNGIGADAAIDSIG--GPDGNEL 229

Query: 228 -----------VVAKDNAPIVDITWPPSHPRAIYSSLTVSG--------------EILEK 262
                       +   +   V+     +  +       +                E    
Sbjct: 230 AFSLRPNGHFLTIGLLSGIQVNWAEIVTKAK---VHANIFHLRHWNDEVSPYKWQETFRH 286

Query: 263 LRPFIESGKLKA-QIDPTGPYKFKDVIEAFRYLETGR-ARGKVVISAF 308
           L   +E+ +L+  ++  T  Y+  DV  A   +++    +GKV ++++
Sbjct: 287 LIRLVENEQLRFMKVHST--YELADVKAAVDVVQSAEKTKGKVFLTSY 332

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  197 bits (502), Expect = 7e-61
 Identities = 78/344 (22%), Positives = 139/344 (40%), Gaps = 53/344 (15%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFPA 59
           M  A ++++ G  E L + +   P+P   ++L++V A+ALN  D  +RQ +   P     
Sbjct: 23  ML-AVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASN 81

Query: 60  VPGCDMAGIVVAKGTSV-TKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
           + G + +G V   G      +  GD              L   G  A+++ V E L+   
Sbjct: 82  ILGLEASGHVAELGPGCQGHWKIGDTAMA----------LLPGGGQAQYVTVPEGLLMPI 131

Query: 119 PKNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           P+ ++  +AA++P A  TA +        + G  + I  G  GVGT  IQL +   GA  
Sbjct: 132 PEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMA-GA-I 189

Query: 178 VVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGD---CKNSF 227
            + T  +  K++  ++LGA    +Y+K  + +   KF      +++ D IG     KN  
Sbjct: 190 PLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVN 249

Query: 228 VVAKD------------NAPIVDI--------TWPPSH--PRAIYSSLTVSGEILEKLRP 265
            +A D            +              +   S    R       +     E++ P
Sbjct: 250 CLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILP 309

Query: 266 FIES---GKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
              +    +L   +D    Y   ++ EA +Y+E  +  GK+V+ 
Sbjct: 310 HFSTEGPQRLLPVLDRI--YPVTEIQEAHKYMEANKNIGKIVLE 351

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  192 bits (491), Expect = 3e-59
 Identities = 81/357 (22%), Positives = 130/357 (36%), Gaps = 77/357 (21%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFPAVPG 62
           A     +G    L+L    +P PQ  +L ++V+A  LN ID   RQ     P   P VPG
Sbjct: 6   AVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPG 65

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNI 122
            + +GIV A G SV  +  GD V                 A AE +      + K P ++
Sbjct: 66  FECSGIVEALGDSVKGYEIGDRVMA----------FVNYNAWAEVVCTPVEFVYKIPDDM 115

Query: 123 SFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
           SF EAA+ P+   TA    F+ A  + G ++ +    GGVG  V QL         V  T
Sbjct: 116 SFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTV-PNVTVFGT 174

Query: 182 TSTPKVEFVKELGADKVIDYRKTKYEDIEEKF--------DVLYDTIG------------ 221
            ST K E +K+     + D       D  ++         D++ D +             
Sbjct: 175 ASTFKHEAIKDSVTH-LFDRN----ADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLK 229

Query: 222 ----------------DCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSG-------- 257
                           + K+ F  AK    +  +     +      +  ++G        
Sbjct: 230 PLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEE----NKVIAGFSLLNLLF 285

Query: 258 ---------EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
                     ++EKL       K+K  +D    +  ++V EA + +      GK+++
Sbjct: 286 KQGRAGLIRGVVEKLIGLYNQKKIKPVVDSL--WALEEVKEAMQRIHDRGNIGKLIL 340

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  192 bits (489), Expect = 6e-59
 Identities = 71/337 (21%), Positives = 121/337 (35%), Gaps = 55/337 (16%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFPAVPG 62
           A   +     E L   D   P    + ++V V+AA +   D    +       + P VPG
Sbjct: 24  AIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPG 83

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNI 122
            + AG+V +     +    GD V               +G  AE + V  S I   P  +
Sbjct: 84  IETAGVVRSAP-EGSGIKPGDRVMA----------FNFIGGYAERVAVAPSNILPTPPQL 132

Query: 123 SFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
              EA +L     T      +    + G+T+ ++G AGG+GT  IQ+AK   GA  V+A 
Sbjct: 133 DDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GA-KVIAV 190

Query: 182 TSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF---------DVLYDTIGDC--KNSFVV 229
            +     EFVK +GAD V+       E   +           D++ D IG     ++   
Sbjct: 191 VNRTAATEFVKSVGADIVLPLE----EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRT 246

Query: 230 AKDNAPIVDI-----TWPPSHP-RAIYSSLTVSG---------------EILEKLRPFIE 268
                 ++ +       P     R +  + ++ G               E    L   + 
Sbjct: 247 LASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVA 306

Query: 269 SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            G ++  +         +  +A +    G+  GK+V+
Sbjct: 307 EG-MRPPVSAR--IPLSEGRQALQDFADGKVYGKMVL 340

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  189 bits (481), Expect = 9e-58
 Identities = 61/339 (17%), Positives = 109/339 (32%), Gaps = 51/339 (15%)

Query: 3   NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFPAVP 61
                     +  L+ G   +P P   Q+L++V  A++NP D    + +   P       
Sbjct: 24  TPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPA 83

Query: 62  GCDMAGIVVAKGTSV-TKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
           G +  G +VA G     K   G  V            L   G+ AE+ V E +       
Sbjct: 84  GFEGVGTIVAGGDEPYAKSLVGKRVA-------FATGLSNWGSWAEYAVAEAAACIPLLD 136

Query: 121 NISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
            +  E+ A++ +   TAI  F     +  +   +  GA  +  L+I LAK   G    + 
Sbjct: 137 TVRDEDGAAMIVNPLTAIAMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEE-GF-RPIV 194

Query: 181 TTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF---------DVLYDTIGD--CKNSFV 228
           T     ++  +K++GA  V++ +     D E             +  D +        F 
Sbjct: 195 TVRRDEQIALLKDIGAAHVLNEKA---PDFEATLREVMKAEQPRIFLDAVTGPLASAIFN 251

Query: 229 VAKDNAPIV-------DITWPPSHPRAIYSSLTVSG---------------EILEKLRPF 266
                A  +       D T      + I+    + G                 + + +  
Sbjct: 252 AMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKR 311

Query: 267 IESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
              G+    +         +   A+   E  +  GKV I
Sbjct: 312 FSDGRWSTDVTAV--VPLAE-AIAWVPAELTKPNGKVFI 347

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  187 bits (478), Expect = 3e-57
 Identities = 77/354 (21%), Positives = 124/354 (35%), Gaps = 67/354 (18%)

Query: 1   MQNAWYYEEYGPK---EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSD 56
           M          P     V    D P+P P    LLV+ R   +N  D      R      
Sbjct: 23  MMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVK 82

Query: 57  FPAVPGCDMAGIVVAKGTSVT-KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLI 115
            P   G +  G VVA G S + ++  G  V                G+ AE+ VV  S+ 
Sbjct: 83  PPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAP-----------GSFAEYTVVPASIA 131

Query: 116 AKKPKNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
              P      E  +L ++  TA     +  G   G+ + +   AGG G   +QL+K    
Sbjct: 132 TPVPS--VKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA-K 188

Query: 175 ASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF--------DVLYDTIG---- 221
             HV+ T S+  K  F+K LG D+ I+Y+    E +            DV+Y+++G    
Sbjct: 189 C-HVIGTCSSDEKSAFLKSLGCDRPINYKT---EPVGTVLKQEYPEGVDVVYESVGGAMF 244

Query: 222 ----DCKNSF---VV------AKDNAPIVDITWPPSHPRAIYSSLTVSG----------- 257
               D   +    +V       +    +  +       + +  S +V G           
Sbjct: 245 DLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQ 304

Query: 258 EILEKLRPFIESGKLKAQID------PTGPYKFKDVIEAFRYLETGRARGKVVI 305
             +  L     SG L  ++D             + +  A  Y+  G+  GK+V+
Sbjct: 305 AAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  183 bits (466), Expect = 1e-55
 Identities = 75/348 (21%), Positives = 135/348 (38%), Gaps = 62/348 (17%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSDF 57
           M  A    + G  +     +  + +P   Q+ ++  A  +N +D+  R     PL   + 
Sbjct: 1   MVMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEP 60

Query: 58  PAVPGCDMAGIVVAKGTSVTKFNTGDEV-YGNIQDFNAEGKLKQLGALAEFIVVEESLIA 116
           P V G + A +V   G  VT F  G+ V             L  LGA ++  +     + 
Sbjct: 61  PIVVGFEAAAVVEEVGPGVTDFTVGERVCTC----------LPPLGAYSQERLYPAEKLI 110

Query: 117 KKPKNISFEEA--ASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY 173
           K PK++  ++   A L L   TA      T   K G  + I   AGG+G +++  A+H  
Sbjct: 111 KVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHL- 169

Query: 174 GASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK---------FDVLYDTIGDC 223
           GA  V+ T ST  K E  ++LG    I+Y     +D  E           DV+YD+IG  
Sbjct: 170 GA-TVIGTVSTEEKAETARKLGCHHTINYST---QDFAEVVREITGGKGVDVVYDSIG-- 223

Query: 224 KNSF------------VVAKDNA----PIVDITWPPSHPRAIY------SSLTVSGEILE 261
           K++               A  +A      + +        +++           +   ++
Sbjct: 224 KDTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEID 283

Query: 262 ----KLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
                L   +++G L + +  T  +  ++   A +Y+   +  G +V+
Sbjct: 284 EGSKCLFDAVKAGVLHSSVAKT--FPLREAAAAHKYMGGRQTIGSIVL 329

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  180 bits (459), Expect = 6e-55
 Identities = 81/327 (24%), Positives = 129/327 (39%), Gaps = 52/327 (15%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFPAVPG 62
           AW  +  G    L+L D P P  +  +++++V A  LN  D   R    L     P +PG
Sbjct: 3   AWVLKRLGG--PLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPG 60

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNI 122
            ++ G+V            G               L   G LAE + V +  +   P+ +
Sbjct: 61  MEVVGVVE-----------GRRYAA----------LVPQGGLAERVAVPKGALLPLPEGL 99

Query: 123 SFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
           S EEAA+ P++  TA    K A  + G+ + +   AG +GT  +Q+A+   G   V+A  
Sbjct: 100 SPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAM-GL-RVLAAA 157

Query: 183 STP-KVEFVKELGADKVIDYRKTKYEDIEEK-FDVLYDTIGD-CKNSFVVAKDNAPIVDI 239
           S P K+     LGA++   Y +           D++ +  G   + S  +      +V I
Sbjct: 158 SRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYI 217

Query: 240 -----TWPPSHP-RAIYSSLTVSG--------------EILEKLRPFIESGKLKAQIDPT 279
                   P  P R +  +L V G              E L  L P +   +L+  + P 
Sbjct: 218 GAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLG-RELRPVVGPV 276

Query: 280 GPYKFKDVIEAFRYLETGRARGKVVIS 306
             + F +   AFR L      GKVV+ 
Sbjct: 277 --FPFAEAEAAFRALLDRGHTGKVVVR 301

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  177 bits (451), Expect = 2e-53
 Identities = 86/348 (24%), Positives = 139/348 (39%), Gaps = 66/348 (18%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPS-DFPA 59
           M     + ++G  EVL+  +F    P  +++ V+ +A  +N ID+  R   L+P    P+
Sbjct: 1   MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIR-SGLYPPPSLPS 59

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEV-YGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
             G + AGIV   G+ V     GD V Y              LGA +    +     A  
Sbjct: 60  GLGTEAAGIVSKVGSGVKHIKAGDRVVYAQS----------ALGAYSSVHNIIADKAAIL 109

Query: 119 PKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           P  ISFE+AA+  L   T     + T   K  +       AGGVG +  Q AK   GA  
Sbjct: 110 PAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GA-K 167

Query: 178 VVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK---------FDVLYDTIGDCKNSF 227
           ++ T  T  K +   + GA +VI+YR+   ED+ E+           V+YD++G  ++++
Sbjct: 168 LIGTVGTAQKAQSALKAGAWQVINYRE---EDLVERLKEITGGKKVRVVYDSVG--RDTW 222

Query: 228 ------------VVAKDNA--PIVDITWPPSHPRAIYS--SLTVSGEIL----------- 260
                       +V+  N+   +        +   +    SL V+   L           
Sbjct: 223 ERSLDCLQRRGLMVSFGNSSGAV-----TGVNLGILNQKGSLYVTRPSLQGYITTREELT 277

Query: 261 ---EKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
               +L   I SG +K  +     Y  KD   A   LE+   +G  ++
Sbjct: 278 EASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLL 325

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  176 bits (448), Expect = 5e-53
 Identities = 101/350 (28%), Positives = 151/350 (43%), Gaps = 72/350 (20%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPS-DFPA 59
           M     +   G  EVL+  DF    P    ++V+ +A  LN ID+  R   L+P+   P+
Sbjct: 1   MAKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYR-SGLYPAPFLPS 59

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEV-YGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
             G + AG+V A G  VT+F  GD V YG             LGA +E  V+ E+ + K 
Sbjct: 60  GLGAEGAGVVEAVGDEVTRFKVGDRVAYGTG----------PLGAYSEVHVLPEANLVKL 109

Query: 119 PKNISFEEAASLP---LAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA 175
             ++SFE+AA+L    L VQ  +   +T   K G+ I     AGGVG+L  Q AK   GA
Sbjct: 110 ADSVSFEQAAALMLKGLTVQYLLR--QTYQVKPGEIILFHAAAGGVGSLACQWAKAL-GA 166

Query: 176 SHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK---------FDVLYDTIGDCKN 225
             ++ T S+P K    K LGA + IDY     ED+ ++           V+YD +G  ++
Sbjct: 167 -KLIGTVSSPEKAAHAKALGAWETIDYSH---EDVAKRVLELTDGKKCPVVYDGVG--QD 220

Query: 226 SF------------VVAKDNA--PIVDITWPPSHPRAIYS--SLTVSGEIL--------- 260
           ++            VV+  NA  P+        +   +    S+ V+   L         
Sbjct: 221 TWLTSLDSVAPRGLVVSFGNASGPV-----SGVNLGILAQKDSVYVTRPTLGSYANNAQN 275

Query: 261 -----EKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
                ++L   + SGKLK        Y  KD  +A   L   R  G  ++
Sbjct: 276 LQTMADELFDMLASGKLKVDGIEQ--YALKDAAKAQIELSARRTTGSTIL 323

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  174 bits (444), Expect = 2e-52
 Identities = 94/350 (26%), Positives = 153/350 (43%), Gaps = 72/350 (20%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAV 60
            Q     +E G  +V+K  D+P+P+   ++LL++ +   +N I+S  R + ++P + P V
Sbjct: 8   QQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFR-KGIYPCEKPYV 66

Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEV-YGNIQDFNAEGKLKQLGALAEFIVV-EESLIAKK 118
            G + +G VVAKG  VT F  GD+V Y +                A++  +  +  + K 
Sbjct: 67  LGREASGTVVAKGKGVTNFEVGDQVAYISN------------STFAQYSKISSQGPVMKL 114

Query: 119 PKNISFEE---AASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
           PK  S EE    A+  L V TA+     A   K G  + +   AGGVG ++ QL K   G
Sbjct: 115 PKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMK-G 173

Query: 175 ASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK---------FDVLYDTIGDCK 224
           A H +A  ST  K++  KE GA+ +I+  K   EDI  +          D  +D++G  K
Sbjct: 174 A-HTIAVASTDEKLKIAKEYGAEYLINASK---EDILRQVLKFTNGKGVDASFDSVG--K 227

Query: 225 NSF------------VVAKDNA--PIVDITWPPSHPRAIYS-SLTVSG------------ 257
           ++F             V+  NA   I     PP     +   ++T+              
Sbjct: 228 DTFEISLAALKRKGVFVSFGNASGLI-----PPFSITRLSPKNITLVRPQLYGYIADPEE 282

Query: 258 --EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
                ++    + S KL  +I  T  Y  +D   A   +E+ +  GK+V+
Sbjct: 283 WKYYSDEFFGLVNSKKLNIKIYKT--YPLRDYRTAAADIESRKTVGKLVL 330

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  172 bits (437), Expect = 4e-51
 Identities = 64/371 (17%), Positives = 121/371 (32%), Gaps = 81/371 (21%)

Query: 4   AWYYEEYG-PKEVLKL--GDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-----RPLFPS 55
           A  Y ++G PK+VL     +        ++++V+   + +NP D  + Q     +P   +
Sbjct: 6   AVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTT 65

Query: 56  -----DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVV 110
                +  A  G +    V+  G++V+    GD V  +  +F         G      + 
Sbjct: 66  GFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNF---------GTWRTHALG 116

Query: 111 EESLIAK-----------KPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGA 158
            +    K           KP  ++  + A++ +   TA            G+  FI  G 
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGG 176

Query: 159 -GGVGTLVIQLAKHFYGASHVVATTSTP-----KVEFVKELGADKVIDYRKTKYEDIEEK 212
              VG    Q+ K      + ++           V  +KELGA +VI   +    +    
Sbjct: 177 TSAVGKYASQIGKLL-NF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPT 234

Query: 213 F-----------DVLYDTIGD--CKNSFVVAKDNAPIV--------DITWPPSHPRAIYS 251
                        +  + +G            +N  ++         +T P S    I+ 
Sbjct: 235 IKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSL--YIFK 292

Query: 252 SLTVSG---------------EILEKLRPFIESGKLKAQIDPTGPY-KFKDVIEAFRYLE 295
           + T +G                 L ++  + E GKL         Y   K + E ++   
Sbjct: 293 NFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGV 352

Query: 296 TGRARGKVVIS 306
                GK +I+
Sbjct: 353 ANSKDGKQLIT 363

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  157 bits (400), Expect = 9e-46
 Identities = 81/356 (22%), Positives = 130/356 (36%), Gaps = 67/356 (18%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID--------SKRRQRPLFPS 55
           A    E G  + L L +  +P P+  Q+L++V AA +   D           R       
Sbjct: 3   AVRLVEIG--KPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGV 60

Query: 56  DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGK------------------ 97
             P   G ++AG +   G  V  ++ GD V   +  +  EG                   
Sbjct: 61  KLPVTLGHEIAGKIEEVGDEVVGYSKGDLVA--VNPWQGEGNCYYCRIGEEHLCDSPRWL 118

Query: 98  -LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVG 156
            +   GA AE+++V       K + ++  EAA L  +  T     + A     +T+ +VG
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVG 178

Query: 157 GAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK--- 212
             GG+GT+ +Q+AK   GA  ++        VE  K  GAD VI+      +D   +   
Sbjct: 179 AGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASM---QDPLAEIRR 234

Query: 213 ------FDVLYDTIGD---CKNSFVVAKDNAPIV-------DITWPPSHPRAIYSSLTVS 256
                  D + D                     V       D+ +    P    S +   
Sbjct: 235 ITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHA--PLITLSEIQFV 292

Query: 257 G-------EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           G       + L  +R   E+GK+K  I  T   K ++  EA   LE  +A G+ V+
Sbjct: 293 GSLVGNQSDFLGIMR-LAEAGKVKPMITKT--MKLEEANEAIDNLENFKAIGRQVL 345

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  143 bits (361), Expect = 6e-40
 Identities = 48/376 (12%), Positives = 97/376 (25%), Gaps = 91/376 (24%)

Query: 6   YYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ---------------R 50
             +  G    L L     P P  D++L+++ A+ LNP D                    R
Sbjct: 11  RIKSSGE-LELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAER 69

Query: 51  PLFPSDFPA--------------VPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEG 96
           P+  +  P                 G + AG+VV  G+S        +            
Sbjct: 70  PIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVA--------- 120

Query: 97  KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVG 156
                   +++  +        P+  +  + AS  +   TA+   +T   +    +    
Sbjct: 121 -AIGGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMRLEGHSALVHTA 179

Query: 157 GAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDI------ 209
            A  +G ++ Q+     G   +V       + + +K  GA  V +     +         
Sbjct: 180 AASNLGQMLNQICLKD-GI-KLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALV 237

Query: 210 EEKFDVLYDTIG---------DCKNSFVVAKDNAPIVDITW--------------PPSHP 246
                + +D  G          C  + +           +               P    
Sbjct: 238 STGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFN 297

Query: 247 RAIYSSLTVSG------------EILEKLRPFIE---SGKLKAQIDPTGPYKFKDVI--E 289
           R    +  + G            E    L+  +         +           +V+  +
Sbjct: 298 RNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKTTFASHYSKE--ISLAEVLDLD 355

Query: 290 AFRYLETGRARGKVVI 305
                       K +I
Sbjct: 356 MIAVYNKRATGEKYLI 371

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  135 bits (343), Expect = 3e-37
 Identities = 75/358 (20%), Positives = 127/358 (35%), Gaps = 74/358 (20%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPI---DSKRRQRPLFPSDF 57
           M+             + + +  +P P  D LLV+V A     I   D        FPS  
Sbjct: 24  MKAVRLE---SVGN-ISVRNVGIPEPGPDDLLVKVEACG---ICGTDRHLLH-GEFPSTP 75

Query: 58  PAVPGCDMAGIVVAKGTSVTKFNTGDEV-----------------YGNI-QDFNAEGKLK 99
           P   G +  GIVV  G++V     G  +                   N+ ++  A G + 
Sbjct: 76  PVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIG-IH 134

Query: 100 QLGALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGA 158
           + G  AE+++V      + P  +     A   PLA    + G   +G K G T+ I+ G 
Sbjct: 135 RDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLAC--CLHGVDLSGIKAGSTVAIL-GG 191

Query: 159 GGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEK----- 212
           G +G L +QLA+   GA+ V+ +     K    +E+GA   +D       D+ E      
Sbjct: 192 GVIGLLTVQLARLA-GATTVILSTRQATKRRLAEEVGATATVDPSA---GDVVEAIAGPV 247

Query: 213 ------FDVLYDTIGD---CKNSFVVAKDNAPIV---------DITWPPSHPRAIYSSLT 254
                  DV+ +  G     K S  +AK    +V          +   P     ++  L 
Sbjct: 248 GLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPF--DILFRELR 305

Query: 255 VSGEIL-----EKLRPFIESGKLKAQIDP--TGPYKFKDVIEAFRYLETGRARGKVVI 305
           V G  +      +    + +G ++  ID   +      +  +            KV++
Sbjct: 306 VLGSFINPFVHRRAADLVATGAIE--IDRMISRRISLDEAPDVISNPAAAGE-VKVLV 360

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  138 bits (349), Expect = 2e-36
 Identities = 84/328 (25%), Positives = 123/328 (37%), Gaps = 66/328 (20%)

Query: 16  LKLGDFPL--PTPQHDQLLVQVRAAALNPIDSKRRQRPL-----FPSDFPAVPGCDMAGI 68
           L L D P         ++ + +RAA +N  D       L     +P    A  G + AG+
Sbjct: 224 LALVDEPTATAPLGDGEVRIAMRAAGVNFRD------ALIALGMYPGV--ASLGSEGAGV 275

Query: 69  VVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAA 128
           VV  G  VT    GD V G I             A     V +  ++ + P   SF  AA
Sbjct: 276 VVETGPGVTGLAPGDRVMGMIP-----------KAFGPLAVADHRMVTRIPAGWSFARAA 324

Query: 129 SLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187
           S+P+   TA       AG + G+++ +   AGGVG   IQLA+H  GA  V AT S  K 
Sbjct: 325 SVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHL-GA-EVYATASEDKW 382

Query: 188 EFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG---DC----------KNSFVVAKDNA 234
           + V EL  + +   R   +E        L  T G   D             S  +     
Sbjct: 383 QAV-ELSREHLASSRTCDFEQ-----QFLGATGGRGVDVVLNSLAGEFADASLRMLPRGG 436

Query: 235 PIVDI---------TWPPSHPRAIYSSL-------TVSGEILEKLRPFIESGKLKAQIDP 278
             +++             +HP   Y +           GE+L +L    E   L+    P
Sbjct: 437 RFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPL--P 494

Query: 279 TGPYKFKDVIEAFRYLETGRARGKVVIS 306
              +  +   EA R+L   R  GK+V++
Sbjct: 495 VTAWDVRQAPEALRHLSQARHVGKLVLT 522

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  128 bits (325), Expect = 7e-35
 Identities = 67/349 (19%), Positives = 130/349 (37%), Gaps = 64/349 (18%)

Query: 10  YGPKEVLKLGDFPLPTPQH-DQLLVQVRAAALNPI---DSKRRQRPLFPSDFPAVPGCDM 65
                 +++ +  +P  +H D++ V++ ++    +   D  R  +      +P   G + 
Sbjct: 7   DTDGI-VRVAESVIPEIKHQDEVRVKIASSG---LCGSDLPRIFK-NGAHYYPITLGHEF 61

Query: 66  AGIVVAKGTSVTKFNTGDEVYGN------------IQDFNAEGKLKQL-----GALAEFI 108
           +G + A G+ V   + GD V                  ++   K   +     G  AE+I
Sbjct: 62  SGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYI 121

Query: 109 VVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQ 167
           VV+   +   P ++  E+ A + P+ V   +  F  A     + + I+G AG +G L IQ
Sbjct: 122 VVKRKNVFALPTDMPIEDGAFIEPITV--GLHAFHLAQGCENKNVIIIG-AGTIGLLAIQ 178

Query: 168 LAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEK------FDVLYDTI 220
            A    GA  V A   S+ K+   K  GA +  +  +     ++          ++ +T 
Sbjct: 179 CAVAL-GAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETA 237

Query: 221 GD---CKNSFVVAKDNAPIV-------DITWPPSHPRAIYSS-LTVSGEILEKLRPF--- 266
           G     + +  +A  +A +        D+    +    I    LTV G  +    P+   
Sbjct: 238 GVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQ 297

Query: 267 --------IESGKLKAQIDP--TGPYKFKDVIEAFRYLETGRARGKVVI 305
                   +   KL   ++P       F+   +A R +      GKV++
Sbjct: 298 EWETASRLLTERKLS--LEPLIAHRGSFESFAQAVRDIARNAMPGKVLL 344

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  123 bits (310), Expect = 1e-32
 Identities = 67/347 (19%), Positives = 116/347 (33%), Gaps = 61/347 (17%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSDFPAVPGCD 64
                   + D P PTP   ++L++V AA      +  +D        +    P   G +
Sbjct: 7   TEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDM---PAAQYAYGLPLTLGHE 63

Query: 65  MAGIVVAKGTSVTKFNTGDEV-----------------------YGNIQDFNAEGKLKQL 101
             G V   G  VT F  GD V                                 G L   
Sbjct: 64  GVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPG-LGSP 122

Query: 102 GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK--TAGFKTGQTIFIVGGAG 159
           G++AE+++V+ +       ++    AA L  A  T              G T  ++G  G
Sbjct: 123 GSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIG-VG 181

Query: 160 GVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEK-----F 213
           G+G + IQ+ +    A+ V+A      ++   +E+GAD  +       + I E       
Sbjct: 182 GLGHVGIQILRAV-SAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGA 240

Query: 214 DVLYDTIGD---CKNSFVVAKDNAPIVDI-----TWPPSHPRAIYSSLTVSG-------E 258
             ++D +G       +  V   +  I  +              I    +V         E
Sbjct: 241 TAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSE 300

Query: 259 ILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           ++E +     +G+L      T  +   +   A+R L  G  RG+ V+
Sbjct: 301 LMEVVA-LARAGRLDI---HTETFTLDEGPAAYRRLREGSIRGRGVV 343

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  122 bits (309), Expect = 1e-32
 Identities = 71/359 (19%), Positives = 128/359 (35%), Gaps = 73/359 (20%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAA--------ALNPIDSKRRQRPL 52
              A   +++   E L + D  +P PQ +++L+++  A            ++        
Sbjct: 3   KSKAALLKKFS--EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVE------AK 54

Query: 53  FPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV--YGNI------------------QDF 92
                P + G + AG +V  G  + K   GD V  Y                     Q  
Sbjct: 55  QGFRLPIILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQII 113

Query: 93  NAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKT---G 149
             +      G  +E+++V+ S    K  ++S  EAA L  A  T++   + A        
Sbjct: 114 PGQT---TNGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFA 170

Query: 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYED 208
           + + IV G GG+    IQ+ K       +V  + +    +F  ELGAD V + +  +   
Sbjct: 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAE-SL 229

Query: 209 IEEK-----FDVLYDTIGD---CKNSFVVAKDNAPIV-------DITWPPSHPRAIYSSL 253
           I +        +  D +G      N   +      I+        ++           + 
Sbjct: 230 INKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEA--FDTAVWNK 287

Query: 254 TVSG-------EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            + G       ++ + +R   ESGK+K            D+ +AF  L+ GR  G+ VI
Sbjct: 288 KLLGSNYGSLNDLEDVVR-LSESGKIKP---YIIKVPLDDINKAFTNLDEGRVDGRQVI 342

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  121 bits (306), Expect = 4e-32
 Identities = 72/349 (20%), Positives = 130/349 (37%), Gaps = 69/349 (19%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAAL----------NPIDSKRRQRPLFPSDFPA 59
             P+E L L D P+P P   ++LV+V AA++          +     R + PL       
Sbjct: 7   LAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPL------- 59

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQ------DFNAEGK------LKQL-----G 102
           V G + +G+V A G  V +   GD V                G        + L     G
Sbjct: 60  VTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDG 119

Query: 103 ALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGV 161
             AE++VV        PK++ FE AA L P     A+         +G+++ I  GAG +
Sbjct: 120 GFAEYVVVPAENAWVNPKDLPFEVAAILEPFGN--AVHTVYAGSGVSGKSVLIT-GAGPI 176

Query: 162 GTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDI-----EEKFDV 215
           G +   + +   GA  ++ +  +  ++ F +   AD++++  +    ++         +V
Sbjct: 177 GLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEV 234

Query: 216 LYDTIGD---CKNSFVVAKDNAPIV-------DITWPPSHPRAIYSSLTVSGEILEKLRP 265
           L +  G+        +                 I +  +    +   +T  G    +L  
Sbjct: 235 LLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLA-GELVMRGITAFGIAGRRLWQ 293

Query: 266 -------FIESGKLKAQIDP--TGPYKFKDVIEAFRYLETGRARGKVVI 305
                   + SG++   + P  T         EAF  L +G+A  KV++
Sbjct: 294 TWMQGTALVYSGRVD--LSPLLTHRLPLSRYREAFGLLASGQA-VKVIL 339

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  120 bits (303), Expect = 1e-31
 Identities = 89/355 (25%), Positives = 140/355 (39%), Gaps = 79/355 (22%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAAL----------NPIDSKRRQRPLFPSDFPA 59
             P    +L +  +P P   ++L++V A ++          N     R + P        
Sbjct: 11  TKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQ------- 63

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEV-----------------YGNI-QDFNAEGKLKQL 101
           + G ++AG VV  G  V     GD V                   ++ Q+    G +   
Sbjct: 64  IMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFG-VDTD 122

Query: 102 GALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGG 160
           G  AE+ VV    I K PK+I  E A    PL    A++    AG  +G+++ I  GAG 
Sbjct: 123 GVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGN--AVDTVL-AGPISGKSVLIT-GAGP 178

Query: 161 VGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEK------- 212
           +G L I +AK   GA  V+ +  S  + E  K++GAD VI+  +   ED+ ++       
Sbjct: 179 LGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGADYVINPFE---EDVVKEVMDITDG 234

Query: 213 --FDVLYDTIGD---CKNSFVVAKDNAPIV-------DITWPPSHPRAIYSSLTVSG--- 257
              DV  +  G     +           +         +T   +    I+ +LT+ G   
Sbjct: 235 NGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFN-NLIIFKALTIYGITG 293

Query: 258 ----EILEKLRPFIESGKLKAQIDP--TGPYK-FKDVIEAFRYLETGRARGKVVI 305
               E    +   ++SGKL   +DP  T  YK F    EAF  +  G+  GKVV 
Sbjct: 294 RHLWETWYTVSRLLQSGKLN--LDPIITHKYKGFDKYEEAFELMRAGKT-GKVVF 345

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  120 bits (302), Expect = 2e-31
 Identities = 77/363 (21%), Positives = 135/363 (37%), Gaps = 96/363 (26%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAAL----------NPIDSKRRQRPLFPSDFPA 59
           +GP + L+L ++P+P P  +++L+++ +  +            I +   ++P+       
Sbjct: 14  HGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPM------- 65

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEV------------------YGNI-QDFNAEGKLKQ 100
           V G + +G V   G+SV     GD V                  Y N+            
Sbjct: 66  VLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRY-NLSPSIFFCATPPD 124

Query: 101 LGALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
            G L  F     +   K P N++FEE A + PL+V   I   +  G   G  + + G AG
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-AG 181

Query: 160 GVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEK------ 212
            +G + + +AK   GA+ VV T  S  ++   KE+GAD V+   K   ++I  K      
Sbjct: 182 PIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLG 240

Query: 213 --FDVLYDTIG--DC-KNSFVVAKDNAPIV-------DITWPPSH--------------- 245
              +V  +  G     +      +    +V         T P  H               
Sbjct: 241 CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYC 300

Query: 246 ---PRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGK 302
              P AI  S+  S  +   ++P +           T  +  +  +EAF   + G    K
Sbjct: 301 NTWPVAI--SMLASKSV--NVKPLV-----------THRFPLEKALEAFETFKKGLG-LK 344

Query: 303 VVI 305
           +++
Sbjct: 345 IML 347

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  114 bits (288), Expect = 2e-29
 Identities = 81/366 (22%), Positives = 131/366 (35%), Gaps = 97/366 (26%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAAL----------NPIDSKRRQRPLFPSDFPA 59
           Y   + L+L   P+P P+ D++L+Q+    +            I     + P+       
Sbjct: 11  YKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPM------- 62

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEV------------------YGNI-QDFNAEGKLKQ 100
           V G + +G VV  G +V     GD V                  Y N+  D         
Sbjct: 63  VIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKY-NLCPDLTFCATPPD 121

Query: 101 LGALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
            G LA + V       K P N+S EE A L PL+V   +   + AG + G T+ ++ GAG
Sbjct: 122 DGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSV--GVHACRRAGVQLGTTVLVI-GAG 178

Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK--VIDYRKTKYEDIEEK----- 212
            +G + +  AK + GA  V    S  ++E  K  GAD   V+D  K +   I E+     
Sbjct: 179 PIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAI 237

Query: 213 ---FDVLYDTIG--DC-KNSFVVAKDNAPIV-------DITWPPS--------------- 244
               +V  D  G   C      + +    ++        +T P                 
Sbjct: 238 GDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRY 297

Query: 245 ---HPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARG 301
              +P A+   +  SG     ++  +           T  +K +  ++AF          
Sbjct: 298 CNDYPIAL--EMVASGRC--NVKQLV-----------THSFKLEQTVDAFEAARKKADNT 342

Query: 302 -KVVIS 306
            KV+IS
Sbjct: 343 IKVMIS 348

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  113 bits (286), Expect = 4e-29
 Identities = 73/346 (21%), Positives = 127/346 (36%), Gaps = 60/346 (17%)

Query: 10  YGPKEVLKLGDFPLPTPQ-HDQLLVQVRAAA-----LNPIDSKRRQRPLFPSDFPAVPGC 63
           +   + L++ D   P  +    ++V++  A      L+ +     +        P   G 
Sbjct: 22  HEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELL--QPKLPYTLGH 79

Query: 64  DMAGIVVAKGTSVTKFNTGDEV--YGNIQDFN----AEGK-----------LKQLGALAE 106
           +  G +      V     GD V  +  + D        G+           L   G  AE
Sbjct: 80  ENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAE 139

Query: 107 FIVVEESLIAKKPKNISFE---EAASLPLAVQTAIEGFKTAGFKT--GQTIFIVGGAGGV 161
           F+      + K PK+IS E   E A L  A  TA    K A      G  + IVG  GG+
Sbjct: 140 FMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVG-VGGL 198

Query: 162 GTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEK-----FDV 215
           G + +QL K     + V+A      K++  + LGAD V+D R+   + + E       +V
Sbjct: 199 GHIAVQLLKVM-TPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNV 257

Query: 216 LYDTIGD---CKNSFVVAKDNAPIV------DITWPPSHPRAIYSSLTVSG-------EI 259
             D +G       +  +      ++      ++ +P    R I S ++  G       E+
Sbjct: 258 AMDFVGSQATVDYTPYLLGRMGRLIIVGYGGELRFPT--IRVISSEVSFEGSLVGNYVEL 315

Query: 260 LEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            E +      GK++        +K  ++ +    LE G   G+ V+
Sbjct: 316 HELVT-LALQGKVRV---EVDIHKLDEINDVLERLEKGEVLGRAVL 357

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  112 bits (283), Expect = 1e-28
 Identities = 60/367 (16%), Positives = 119/367 (32%), Gaps = 85/367 (23%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSDFPAVPGCD 64
               + L   +F +       +LV++ +A      ++    +  + P      P + G +
Sbjct: 24  EKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVP-----LPIILGHE 78

Query: 65  MAGIVVAKGTSVTKFNT-----GDEVYGNIQDFNAE---------GKLKQL--------- 101
            AG VV         N      GD +   + +              K   L         
Sbjct: 79  GAGRVVEVNGEKRDLNGELLKPGDLI---VWNRGITCGECYWCKVSKEPYLCPNRKVYGI 135

Query: 102 -----------GALAEFIVVE-ESLIAKKPKNISFEEAASLPLAVQTAIEG-FKTAGFKT 148
                      G  +  IV++ E+ + K  +    +  A    +  TA     +      
Sbjct: 136 NRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFA 195

Query: 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYE 207
           G+T+ I G AG +G   + +A+   GA +V+    +P +++  +E+GAD  ++ R+T  E
Sbjct: 196 GKTVVIQG-AGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVE 253

Query: 208 DIEEK---------FDVLYDTIGD----------CKN--SFVVAKDNAPIVDITWPPSHP 246
           +  +           D + +  GD           +    + VA    P   + +     
Sbjct: 254 ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEW 313

Query: 247 RAIYSSLTVSGEI------LEKLRPFIESGKLKAQIDP--TGPYKFKDVIEAFRYLETGR 298
             +  + T  G          K             +    T     K+  +A   +E+  
Sbjct: 314 L-VLKNATFKGIWVSDTSHFVKTVSITSRNYQL--LSKLITHRLPLKEANKALELMESRE 370

Query: 299 ARGKVVI 305
           A  KV++
Sbjct: 371 A-LKVIL 376

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  109 bits (273), Expect = 4e-27
 Identities = 66/370 (17%), Positives = 125/370 (33%), Gaps = 84/370 (22%)

Query: 10  YGPKEVLKLGDFPLPT-PQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSD--FPAVP 61
           +   E +++ + P P   +  +++++V+A       ++   +      L+P    FP   
Sbjct: 37  WRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTL 95

Query: 62  GCDMAGIVVAKGTSVT------KFNTGDEV-----------------YGNI-QDFNAEGK 97
           G + +G+VV  G          +F  G+ V                 + N  ++ N  G 
Sbjct: 96  GHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELG- 154

Query: 98  LKQLGALAEFIVVEESLIAKKP-------KNISFEEAASL-PLAVQTAIEGFKTAGFKTG 149
               GA AE++ V+                +  F   + + P +V       +  G + G
Sbjct: 155 FNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPG 214

Query: 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYED 208
             + I+G  G +G   + + KH  GAS V+ +  S  +    KELGAD VID  K   E+
Sbjct: 215 DNVVILG-GGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAKELGADHVIDPTK---EN 269

Query: 209 IEEK---------FDVLYDTIG---------------DCKNSFVVAKDNAPIVDITWPPS 244
             E            +  +  G                   +  VA        I     
Sbjct: 270 FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGE 329

Query: 245 HPRAIYSSLTVSG-------EILEKLRPFIESG-KLKAQIDPTGPYKFKDVIEAFRYLET 296
                     + G           ++   + SG  +   I  +     +++ E  + L+T
Sbjct: 330 --VFQVRRAQIVGSQGHSGHGTFPRVISLMASGMDMTKII--SKTVSMEEIPEYIKRLQT 385

Query: 297 GRARGKVVIS 306
            ++  KV + 
Sbjct: 386 DKSLVKVTML 395

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  104 bits (261), Expect = 7e-26
 Identities = 84/358 (23%), Positives = 132/358 (36%), Gaps = 92/358 (25%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRA---------AALN--PIDSKRRQRPLFPSDFP 58
              KE LK+ +   PT  + ++LV+++A         AA    P+  K           P
Sbjct: 7   EQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK----------LP 56

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEV------------------------YGNIQDFNA 94
            +PG +  GIV   G  VT    GD V                        +     ++ 
Sbjct: 57  LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSV 116

Query: 95  EGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFI 154
           +G        AE+       + K P N+SFEEAA +  A  T  +  K  G K G+ + I
Sbjct: 117 DG------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAI 170

Query: 155 VGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFVKELGADKVIDYRKTK-YEDIEEK 212
            G  GG+G + +Q AK   G  +VVA      K+E  KELGAD V++  K    + ++EK
Sbjct: 171 YGI-GGLGHVAVQYAKAM-GL-NVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEK 227

Query: 213 ---FDVLYDTIGDCKNSFVVAKDNAPIVDITWP---------PSHP------RAIYSSLT 254
                    T        V         +             P           + + + 
Sbjct: 228 VGGVHAAVVTA-------VSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIK 280

Query: 255 VSG-------EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
           + G       ++ E L+ F   GK+K  I+       + + E F  +  G+  G+VV+
Sbjct: 281 IIGSIVGTRKDLQEALQ-FAAEGKVKTIIE---VQPLEKINEVFDRMLKGQINGRVVL 334

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  104 bits (261), Expect = 8e-26
 Identities = 78/355 (21%), Positives = 132/355 (37%), Gaps = 70/355 (19%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRA---------AALN--PIDSKRRQ 49
           M  A     +G    L + + P+P P   Q+ V++ A         AA    P+      
Sbjct: 2   MMKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPT--- 56

Query: 50  RPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV-----YGNIQ--DFNAEGKLKQL- 101
                   P +PG +  G V A G+ V++   GD V     Y      +   +G  + L 
Sbjct: 57  -------LPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQG-WETLC 108

Query: 102 -----------GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQ 150
                      G   E++V + + +   P  + F E A +  A  T  +G K    + GQ
Sbjct: 109 EKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQ 168

Query: 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFVKELGADKVIDYRKTK-YED 208
            + I G  GG+G + +Q A+   G   V A      K+   + LGA+  ++ R T     
Sbjct: 169 WVVISGI-GGLGHVAVQYARAM-GL-RVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAW 225

Query: 209 IEEK---FDVLYDTIG---DCKNSFVVAKDNAPIVDITWPPS-HPRAIYS----SLTVSG 257
           ++++      +  T         +  + +    I     PP      I+      +T+ G
Sbjct: 226 LQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG 285

Query: 258 -------EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
                  ++ E L  F   G +KA +      K  DV + F  L  G+  G+VV+
Sbjct: 286 SIVGTRSDLQESLD-FAAHGDVKATVS---TAKLDDVNDVFGRLREGKVEGRVVL 336

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  104 bits (261), Expect = 1e-25
 Identities = 71/366 (19%), Positives = 126/366 (34%), Gaps = 88/366 (24%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRA---------AALN--PIDSKRRQ 49
            Q    + E   K  L+  D P+P P+ ++LL+ V+          A     P+      
Sbjct: 5   TQKGVIFYESHGK--LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPL------ 56

Query: 50  RPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGD---------------------EVY-- 86
               P   P V G + AG+VV  G +V  +  GD                     E    
Sbjct: 57  ----PVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCP 112

Query: 87  -GNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAG 145
             ++  +  +G      +  ++   +    A  P+     + A +  A  T  +  K+A 
Sbjct: 113 HADLSGYTHDG------SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSAN 166

Query: 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFVKELGADKVIDYRKT 204
              G  + I G AGG+G+L +Q AK   G   V+       K E  + +G +  ID+ K 
Sbjct: 167 LMAGHWVAISGAAGGLGSLAVQYAKAM-GY-RVLGIDGGEGKEELFRSIGGEVFIDFTKE 224

Query: 205 KYEDIEEK------FDVLYDTIG---DCKNSFVVAKDNAPIVDITWPP-SHPRA-----I 249
           K                + +        + S    + N   V +  P  +   +     +
Sbjct: 225 KDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQV 284

Query: 250 YSSLTVSG----------EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRA 299
             S+++ G          E L+    F   G +K+ I          + E +  +E G+ 
Sbjct: 285 VKSISIVGSYVGNRADTREALD----FFARGLVKSPIK---VVGLSTLPEIYEKMEKGQI 337

Query: 300 RGKVVI 305
            G+ V+
Sbjct: 338 VGRYVV 343

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  101 bits (254), Expect = 1e-24
 Identities = 67/355 (18%), Positives = 115/355 (32%), Gaps = 76/355 (21%)

Query: 10  YGPKEVLKLGDFPLP-TPQHDQLLVQVRAAAL----------NPIDSKRRQRPLFPSDFP 58
                   L         +  ++ V VR+  +            I     +         
Sbjct: 22  ISEASP-SLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDH------ 74

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQ------DFNAEGK------LKQL----- 101
            V G + AG V+A   SV     GD V    Q      +    G+      +  L     
Sbjct: 75  -VLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPV 133

Query: 102 -GALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
            G L  ++        K   N+S+E  A L PL+V  A+ G + AG + G  + I G AG
Sbjct: 134 PGLLRRYVNHPAVWCHKIG-NMSYENGAMLEPLSV--ALAGLQRAGVRLGDPVLICG-AG 189

Query: 160 GVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKY-EDIEEK----- 212
            +G + +  AK   GA  +V T     +++F KE+  + V    +    E+  +K     
Sbjct: 190 PIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESF 248

Query: 213 ----FDVLYDTIG--DC-KNSFVVAKDNAPIV-------DITWPPSHPRAIYSSLTVSG- 257
                 V  +  G       +    K    +        +I  P     A    + +   
Sbjct: 249 GGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMR--ASVREVDLQFQ 306

Query: 258 ----EILEKLRPFIESGKLKAQIDP--TGPYKFKDVIEAFRYLETGRARG-KVVI 305
                   +    +E+G +   +    T  +  +D ++AF      +    KV I
Sbjct: 307 YRYCNTWPRAIRLVENGLVD--LTRLVTHRFPLEDALKAFETASDPKTGAIKVQI 359

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  100 bits (252), Expect = 2e-24
 Identities = 58/367 (15%), Positives = 112/367 (30%), Gaps = 89/367 (24%)

Query: 9   EYGPKEVLKLGDFPLPTPQHDQLLVQVRAAAL----------NPIDSKRRQRPLFPSDFP 58
           + G      + + P P P+  + LV+     +                  +  L      
Sbjct: 7   KRGEDR-PVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHL------ 59

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQ----------------------DFNAEG 96
            V G +  G+VV      T+   GD V   ++                       +   G
Sbjct: 60  -VLGHEAVGVVVDPN--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERG 116

Query: 97  KLKQLGALAEFIVVEESLIAKKPKNISFEEAASL-PLAV----QTAIEGFKTAGFKTGQT 151
            +   G ++EF    E  + + P++ + E    + P+++           ++A      +
Sbjct: 117 IVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSS 175

Query: 152 IFIVGGAGGVGTLVIQLAKHF-YGASHVVATTST----PKVEFVKELGADKVIDYRKTKY 206
            F++ G G +G L + + K    G  ++          P ++ ++EL A  V   R+T  
Sbjct: 176 AFVL-GNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDS-RQTPV 233

Query: 207 EDIEEK---FDVLYDTIGD-----------CKNSFVV----AKDNAPIVDITWPPSHPRA 248
           ED+ +     D +Y+  G              N          D A  VD          
Sbjct: 234 EDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHRE--M 291

Query: 249 IYSSLTVSG-------EILEKLRPFIESGKLKAQIDP--TGPYKFKDVIEAFRYLETGRA 299
           +  +  + G               F +  K    ++   TG +   +   AF   +    
Sbjct: 292 VLHNKALVGSVNSHVEHFEAATVTFTKLPKWF--LEDLVTGVHPLSEFEAAF---DDDDT 346

Query: 300 RGKVVIS 306
             K  I 
Sbjct: 347 TIKTAIE 353

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 97.1 bits (242), Expect = 4e-23
 Identities = 57/367 (15%), Positives = 103/367 (28%), Gaps = 79/367 (21%)

Query: 10  YGPKEVLKLGDFPLPT-PQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSDFPAVPGC 63
             P   +++ D        + ++ ++             ++ K     L       V G 
Sbjct: 7   KPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGH 66

Query: 64  DMAGIVVAKGTSVTKFNTGDEVYGN--------------------IQDFNAEGKLKQLGA 103
           +  G+V       ++   GD V                         +F   G  K  G 
Sbjct: 67  EAIGVVEESYHGFSQ---GDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGF 123

Query: 104 LAEFIVVEESLIAKKPKNISFEEAASLPLAV------------QTAIEGFKTAGFKTGQT 151
           + E+   +   + K PK+I      + PLA             +         G    + 
Sbjct: 124 MREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRK 183

Query: 152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIE 210
           + +VG  G +G L   L +  YG    +A    P +VE                 Y+ ++
Sbjct: 184 VLVVG-TGPIGVLFTLLFRT-YGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLK 241

Query: 211 E---KFDVLYDTIGDCKNSF-----------------VVAKDNAPIVDITWPPSHPRAIY 250
           +   KFDV+ D  G   N                        + P+   T        ++
Sbjct: 242 DSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTL----QEIVH 297

Query: 251 SSLTVSGEILEKLRPF------IESGKLKAQIDP----TGPYKFKDVIEAFRYLETGRAR 300
           ++ T+ G +  +   F      + S K           T      D  E  + L      
Sbjct: 298 TNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHG 357

Query: 301 G-KVVIS 306
             K+ I 
Sbjct: 358 EIKIRIL 364

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 98.4 bits (245), Expect = 8e-23
 Identities = 61/342 (17%), Positives = 114/342 (33%), Gaps = 57/342 (16%)

Query: 4    AWYYE--EYGPKEVLKLGDFPLPTPQ---HDQLLVQVRAAALNPIDSKRRQRPLFPSDFP 58
              +      G    ++    PL           L  V   +LN  D           D  
Sbjct: 1530 HAFVNVLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVML-ATGKLSPD-- 1586

Query: 59   AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
            ++PG  +    +       +  +G  V G          +     LA  +++ +    + 
Sbjct: 1587 SIPGKWLTRDCMLGMEFSGRDASGRRVMG----------MVPAEGLATSVLLLQHATWEV 1636

Query: 119  PKNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
            P   + EEAAS+P+   TA          + G+++ I  G+GGVG   I +A    G   
Sbjct: 1637 PSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSR-GCR- 1694

Query: 178  VVATTSTP-KVEFVKE----LGADKVIDYRKTKYEDI------EEKFDVLYDTIGD--CK 224
            V  T  +  K  +++     L      + R T +E         +  D++ +++ +   +
Sbjct: 1695 VFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQ 1754

Query: 225  NSFVVAKDNAPIVDI-----------TWPPSHPRAIYSSLTVS----------GEILEKL 263
             S      +   ++I                     +  + +            E+ E L
Sbjct: 1755 ASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELL 1814

Query: 264  RPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
            +  I+ G ++        +    V  AFRY+  G+  GKVVI
Sbjct: 1815 KAGIQEGVVQP--LKCTVFPRTKVEAAFRYMAQGKHIGKVVI 1854

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 86.9 bits (216), Expect = 2e-20
 Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 40/168 (23%)

Query: 113 SLIAKKPKNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKH 171
            L+   P  ++  EAA+  +A  TA     +      G+ + I    GGVG   + +AK 
Sbjct: 2   DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM 61

Query: 172 FYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVA 230
             GA  +  T  +  K E +  LG + V D R   + D     ++L  T G         
Sbjct: 62  I-GA-RIYTTAGSDAKREMLSRLGVEYVGDSRSVDFAD-----EILELTDGYG------- 107

Query: 231 KDNAPIVDITWPPSHPRAIYSSLTVSGEILEK----LRP---FIESGK 271
                 VD+         + +SL  +GE +++    L P   FIE GK
Sbjct: 108 ------VDV---------VLNSL--AGEAIQRGVQILAPGGRFIELGK 138

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 84.1 bits (209), Expect = 1e-18
 Identities = 71/361 (19%), Positives = 125/361 (34%), Gaps = 87/361 (24%)

Query: 1   MQN-AWYYEEYGPKEVLKLGDF-----PLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP 54
           ++  +W  +++  +      DF      LP  ++ ++L++    +++P       R    
Sbjct: 6   VKAKSWTLKKH-FQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPY-----MRIASK 59

Query: 55  SDFPAVPGCDMAGIVVAKGTSVT-----KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIV 109
                  G  M G  VA+   V       F  G  V                       +
Sbjct: 60  ---RLKEGAVMMGQQVAR---VVESKNSAFPAGSIVLAQ-------------SGWTTHFI 100

Query: 110 VEESLIAKKPKNISFEEAASLPLAV-----QTAIEGF-KTAGFKTGQTIFIVGGAGGVGT 163
            +   + K       +   SL L        TA  G  +  G K G+T+ +   AG VG+
Sbjct: 101 SDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGS 160

Query: 164 LVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKF--------D 214
           +V Q+AK   G   VV    +  K+ ++K++G D   +Y+      +EE          D
Sbjct: 161 VVGQIAKL-KGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTV--NSLEEALKKASPDGYD 216

Query: 215 VLYDTIG--------DCKNSF-------VVAKDNAPIVDITWPPSHPRAIYSSLTVSG-- 257
             +D +G             F        ++  N     +   PS    IY  L + G  
Sbjct: 217 CYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRM-DQLPPGPSPESIIYKQLRIEGFI 275

Query: 258 ----------EILEKLRPFIESGKLKAQIDPT-GPYKFKDVIEAFRYLETGRARGKVVIS 306
                     + L  L  ++  GK++     T G   F+++  AF  +  G   GK V++
Sbjct: 276 VYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKG---FENMPAAFIEMLNGANLGKAVVT 332

Query: 307 A 307
           A
Sbjct: 333 A 333

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 79.6 bits (197), Expect = 5e-17
 Identities = 42/204 (20%), Positives = 71/204 (34%), Gaps = 53/204 (25%)

Query: 54  PSDFPAVPGCDMAGIVVAKGTSVTKFNTGD---------------------EVY--GNIQ 90
              +P +PG ++AGI+   G  V KF  GD                     E +    + 
Sbjct: 55  EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVF 114

Query: 91  DFNAEGKL----KQLGALAEFIVVEESLIAKKPKNISFEEAASL---------PLAVQTA 137
            ++           +G  +  IVV+E+ +    KN   E+ A L         PL     
Sbjct: 115 TYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPL----- 169

Query: 138 IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFVKELGAD 196
               K +    G  + + G  GG+G++ ++ A    GA  V     +  K +    +G  
Sbjct: 170 ----KFSKVTKGTKVGVAG-FGGLGSMAVKYAVAM-GA-EVSVFARNEHKKQDALSMGVK 222

Query: 197 KVIDYRKTKYEDIEEKFDVLYDTI 220
                 K      +E+ D +  TI
Sbjct: 223 HFYTDPK----QCKEELDFIISTI 242

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 56/205 (27%), Positives = 83/205 (40%), Gaps = 50/205 (24%)

Query: 54  PSDFPAVPGCDMAGIVVAKGTSVTKFNTGD---------------------EVY--GNIQ 90
            + +P VPG ++ G VVA G  V K+  GD                     E Y      
Sbjct: 73  GTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG 132

Query: 91  DFNA---EGKLKQLGALAEFIVVEESLIAKKPKNI-SFEEAASL---------PLAVQTA 137
            +N+   +     LG  ++ IVV E  + +           A L         PL     
Sbjct: 133 TYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPL----- 187

Query: 138 IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFVKELGAD 196
               +      G+ + +V G GG+G + I+LA    GA HVVA TTS  K E  K LGAD
Sbjct: 188 ----RHWQAGPGKKVGVV-GIGGLGHMGIKLAHAM-GA-HVVAFTTSEAKREAAKALGAD 240

Query: 197 KVIDYR-KTKYEDIEEKFDVLYDTI 220
           +V++ R   +     + FD + +T+
Sbjct: 241 EVVNSRNADEMAAHLKSFDFILNTV 265

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 76.6 bits (189), Expect = 6e-16
 Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 17/175 (9%)

Query: 56  DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLI 115
           ++P + G D AG VV+  ++  +F  GDEV     +    G   + G L+E+  V    +
Sbjct: 60  EYPLILGIDAAGTVVS--SNDPRFAEGDEVIATSYEL---GV-SRDGGLSEYASVPGDWL 113

Query: 116 AKKPKNISFEEAASLPLAVQTAIEGFKTAGFK----TGQTIFIVGGAGGVGTLVIQLAKH 171
              P+N+S +EA     A  TA                 ++ + G  GGVG + + +   
Sbjct: 114 VPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNK 173

Query: 172 FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIG 221
             G   V +T +    +++K+LGA +VI  R+  Y+        +++    D +G
Sbjct: 174 R-GYDVVASTGNREAADYLKQLGASEVIS-REDVYDGTLKALSKQQWQGAVDPVG 226

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 76.2 bits (188), Expect = 7e-16
 Identities = 45/236 (19%), Positives = 93/236 (39%), Gaps = 28/236 (11%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID------SKRRQRPLFP 54
              A+   +   +    +    +       +LV+V  +++N  D        +  +    
Sbjct: 3   AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVK---- 58

Query: 55  SDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESL 114
             +P VPG D+AG+VV+  +   +F  GDEV     +    G     G  +E+  +    
Sbjct: 59  -TYPFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEI---GV-THFGGYSEYARLHGEW 111

Query: 115 IAKKPKNISFEEAASLPLAVQTAIEGFKT----AGFKTGQTIFIVGGAGGVGTLVIQLAK 170
           +   PK ++ +EA ++  A  TA                  + + G  GGVG+L + +  
Sbjct: 112 LVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLA 171

Query: 171 HFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIG 221
              G +   +T    + ++++ LGA +V+  R+    +       +++    D +G
Sbjct: 172 KR-GYTVEASTGKAAEHDYLRVLGAKEVLA-REDVMAERIRPLDKQRWAAAVDPVG 225

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 76.1 bits (188), Expect = 9e-16
 Identities = 50/205 (24%), Positives = 79/205 (38%), Gaps = 50/205 (24%)

Query: 54  PSDFPAVPGCDMAGIVVAKGTSVTKFNTGD---------------------EVY--GNIQ 90
            S +P VPG ++ G V   G+ V K N GD                     E Y    I 
Sbjct: 67  FSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMIL 126

Query: 91  DFNA---EGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASL---------PLAVQTAI 138
            + +   +G +   G  +  +V  E  I + P N+  +  A L         PL      
Sbjct: 127 TYASIYHDGTITY-GGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPL----KY 181

Query: 139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP--KVEFVKELGAD 196
            G    G   G     + G GG+G + ++ AK F G+  V   +++P  K E +K  GAD
Sbjct: 182 FGLDEPGKHIG-----IVGLGGLGHVAVKFAKAF-GS-KVTVISTSPSKKEEALKNFGAD 234

Query: 197 KVIDYR-KTKYEDIEEKFDVLYDTI 220
             +  R + + +      D + DT+
Sbjct: 235 SFLVSRDQEQMQAAAGTLDGIIDTV 259

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 73.0 bits (180), Expect = 9e-15
 Identities = 45/206 (21%), Positives = 71/206 (34%), Gaps = 52/206 (25%)

Query: 54  PSDFPAVPGCDMAGIVVAKGTSV-TKFNTGD---------------------EVY--GNI 89
               P V G ++ G VV  G    +    G                      E Y    +
Sbjct: 59  NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFV 118

Query: 90  QDFNA---EGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASL---------PLAVQTA 137
             ++    +G + Q G  A ++ V E  +   P+NI    AA L         PL     
Sbjct: 119 TTYSQPYEDGYVSQ-GGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL----- 172

Query: 138 IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFVKELGAD 196
                  G   G+ + IVG  GG+G++   ++K   GA      + S+ K E   ++GAD
Sbjct: 173 ----VRNGCGPGKKVGIVG-LGGIGSMGTLISKAM-GA-ETYVISRSSRKREDAMKMGAD 225

Query: 197 KVIDYR--KTKYEDIEEKFDVLYDTI 220
             I         E   + FD++    
Sbjct: 226 HYIATLEEGDWGEKYFDTFDLIVVCA 251

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 50/205 (24%)

Query: 54  PSDFPAVPGCDMAGIVVAKGTSVTKFNTGD---------------------EVY--GNIQ 90
            S++P VPG ++ G VV  G+ V+KF  GD                     E Y    I 
Sbjct: 60  MSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIW 119

Query: 91  DFNA---EGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASL---------PLAVQTAI 138
            +N     G+  Q G  A+  VV +  + K P+ ++ E+AA L         PL+     
Sbjct: 120 SYNDVYINGQPTQ-GGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSH---- 174

Query: 139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP--KVEFVKELGAD 196
            G K  G + G     + G GGVG + +++AK   G  HV   +S+   + E +++LGAD
Sbjct: 175 FGLKQPGLRGG-----ILGLGGVGHMGVKIAKAM-GH-HVTVISSSNKKREEALQDLGAD 227

Query: 197 KVIDYR-KTKYEDIEEKFDVLYDTI 220
             +    + K  ++ +  D + DT+
Sbjct: 228 DYVIGSDQAKMSELADSLDYVIDTV 252

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 71.0 bits (175), Expect = 4e-14
 Identities = 63/349 (18%), Positives = 116/349 (33%), Gaps = 92/349 (26%)

Query: 16  LKLGDFPLPTPQHD-QLLVQVRAAALNP------IDSKRRQRPLFPSDFPAVPGCDMAGI 68
                  L  P+    +LV+    + +P               L        PG  + G 
Sbjct: 25  FTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPSTAALAQ---AYTPGQPIQGY 81

Query: 69  VVAKGTSVT-----KFNTGDEVYGNI--QDFNAEGKLKQLGALAEFIVVEESLIAKKPKN 121
            V++   +       +  GD ++G +  +++               ++   +    K ++
Sbjct: 82  GVSR---IIESGHPDYKKGDLLWGIVAWEEY--------------SVITPMTHAHFKIQH 124

Query: 122 ISFEEAASLPLAV-------QTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFY 173
                   L            TA  GF      K G+T+++   +G VG LV QLAK   
Sbjct: 125 ----TDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKM-M 179

Query: 174 GASHVVATTSTP-KVEFVK-ELGADKVIDYRKTKYEDIEEKF--------DVLYDTIG-- 221
           G  +VV +  +  KV+ +K + G D   +Y++    D+            D+ ++ +G  
Sbjct: 180 GC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEES--DLTAALKRCFPNGIDIYFENVGGK 236

Query: 222 ------DCKNSF-------VVAKDNAPIVDITWPPSHPRAIYSSLTVSG----------- 257
                    N         ++++ N    +     +    IY    + G           
Sbjct: 237 MLDAVLVNMNMHGRIAVCGMISQYNLE--NQEGVHNLSNIIYKRNRIQGFVVSDFYDKYS 294

Query: 258 EILEKLRPFIESGKLKAQIDPT-GPYKFKDVIEAFRYLETGRARGKVVI 305
           + LE + P I  GK+    D   G    +   EA   L  G+  GK V+
Sbjct: 295 KFLEFVLPHIREGKITYVEDVADG---LEKAPEALVGLFHGKNVGKQVV 340

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 70.0 bits (172), Expect = 7e-14
 Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 15/173 (8%)

Query: 56  DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLI 115
            FP +PG D AG V A  +   +F+ G EV          G+    G LAE   V+   +
Sbjct: 56  HFPMIPGIDFAGTVHA--SEDPRFHAGQEVLLTGWGV---GE-NHWGGLAERARVKGDWL 109

Query: 116 AKKPKNISFEEAASLPLAVQTA---IEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKH 171
              P  +S   A  +  A  TA   +   + AG       + + G +GGVG+  + L   
Sbjct: 110 VALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHK 169

Query: 172 FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED---IEEKFDVLYDTIG 221
             G      +       ++K LGA++++  R    E     ++ +    DT+G
Sbjct: 170 L-GYQVAAVSGRESTHGYLKSLGANRILS-RDEFAESRPLEKQLWAGAIDTVG 220

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 57/344 (16%), Positives = 113/344 (32%), Gaps = 77/344 (22%)

Query: 16  LKLGDFPLPTPQHD-QLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP-GCDMAGIVVAKG 73
            ++ +  LP   ++ Q+ V+    +++P    R                  + G  +   
Sbjct: 29  FRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGI- 87

Query: 74  TSVT-----KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAA 128
             +          GD V                      ++++ + + K    +  +   
Sbjct: 88  --IEESKHTNLTKGDFVTS------------FYWPWQTKVILDGNSLEKVDPQLV-DGHL 132

Query: 129 SLPLAV-----QTAIEGF-KTAGFKTG--QTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           S  L        T++ G  +      G  +T+ + G AG  G++  Q+     G S VV 
Sbjct: 133 SYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-LGCSRVVG 191

Query: 181 TTSTP-KVEFVK-ELGADKVIDYRKTKYEDIEEKF--------DVLYDTIG--------D 222
              T  K   +  ELG D  I+Y+K   +++ E+         DV +D +G         
Sbjct: 192 ICGTHEKCILLTSELGFDAAINYKK---DNVAEQLRESCPAGVDVYFDNVGGNISDTVIS 248

Query: 223 CKNSF-------VVAKDNA--PIVDITWPPSHPRAIYSSLTVSG-----------EILEK 262
             N          +++ N   P      P         ++T                + +
Sbjct: 249 QMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQ 308

Query: 263 LRPFIESGKLKAQIDPT-GPYKFKDVIEAFRYLETGRARGKVVI 305
           L  + + GKLK +     G    +++  AF+ + TG   GK ++
Sbjct: 309 LSQWFKEGKLKIKETVING---LENMGAAFQSMMTGGNIGKQIV 349

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 67.3 bits (165), Expect = 8e-13
 Identities = 47/260 (18%), Positives = 88/260 (33%), Gaps = 51/260 (19%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +   + L + +  +  P  +++ +++ A  +   D            FP V G + AGIV
Sbjct: 15  WEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIV 74

Query: 70  VAKGTSVTKFNTGDEV------------------------------YGNIQD----FNAE 95
            + G  VT+F  G++V                                 +      F  +
Sbjct: 75  ESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCK 134

Query: 96  GK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG--FKTAGFKTG 149
           G+           +++ VV +  +AK   +   +    L   V T   G    TA  + G
Sbjct: 135 GRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGF-GAAVNTAKVEPG 193

Query: 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---DYRKTK 205
            T  +  G G VG   +       GA  ++A   +  K E  K  GA   +   D+ +  
Sbjct: 194 STCAVF-GLGAVGLAAVMGCHS-AGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPI 251

Query: 206 YEDIEEK----FDVLYDTIG 221
            + + +      D   + +G
Sbjct: 252 SQVLSKMTNGGVDFSLECVG 271

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 56/266 (21%), Positives = 95/266 (35%), Gaps = 62/266 (23%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAAL-----NPIDSKRRQRPLFPSDFPAVPGCD 64
           +  K+   + +  +  P+  ++ +++ A  +     + +           +  P + G +
Sbjct: 15  WEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL------VTPLPVIAGHE 68

Query: 65  MAGIVVAKGTSVTKFNTGDEV------------------------------YGNIQD--- 91
            AGIV + G  VT    GD+V                               G +QD   
Sbjct: 69  AAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTS 128

Query: 92  -FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG--FKTA 144
            F   GK           +++ VV+E  +AK       E+   +     T   G   K A
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY-GSAVKVA 187

Query: 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---D 200
               G T  +  G GGVG  VI   K   GA+ ++    +  K    KE+GA + +   D
Sbjct: 188 KVTQGSTCAVF-GLGGVGLSVIMGCKA-AGAARIIGVDINKDKFAKAKEVGATECVNPQD 245

Query: 201 YRKTKYEDIEEK----FDVLYDTIGD 222
           Y+K   E + E      D  ++ IG 
Sbjct: 246 YKKPIQEVLTEMSNGGVDFSFEVIGR 271

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 65.6 bits (161), Expect = 4e-12
 Identities = 53/261 (20%), Positives = 82/261 (31%), Gaps = 79/261 (30%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSDFPAVPGCD 64
                  +L    +  PQ D++LV+V A       L   D K       P   PAV G +
Sbjct: 13  PCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY------PVPLPAVLGHE 66

Query: 65  MAGIVVAKGTSVTKFNTGDEV---Y-----------------GNIQDFNAEGKLKQ---- 100
            +GI+ A G +VT+   GD V   Y                       N  G   +    
Sbjct: 67  GSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHA 126

Query: 101 ---------------LGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG--FKT 143
                            + A + +  E+   K  K++  E    L   +QT   G     
Sbjct: 127 LCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGA-GACINA 185

Query: 144 AGFKTGQTIFIVGGAGGVGTLVIQ---------------------LAKHFYGASHVVATT 182
                  +     GAG VG   +                      LAK   GA+HV+ + 
Sbjct: 186 LKVTPASSFVTW-GAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL-GATHVINSK 243

Query: 183 STPKVEFVKEL---GADKVID 200
           +   V  +KE+   G +  ++
Sbjct: 244 TQDPVAAIKEITDGGVNFALE 264

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 65.3 bits (160), Expect = 4e-12
 Identities = 59/260 (22%), Positives = 93/260 (35%), Gaps = 51/260 (19%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +   + L + +  +  P+  ++ +++ A A+   D+           FP + G   AGIV
Sbjct: 13  WEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIV 72

Query: 70  VAKGTSVTKFNTGDEV------------------------------YGNIQD----FNAE 95
            + G  VTK   GD V                               G + D    F  +
Sbjct: 73  ESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCK 132

Query: 96  GK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG--FKTAGFKTG 149
           GK           +E+ VV +  +AK       ++   L   + T   G    TA  + G
Sbjct: 133 GKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY-GAAVNTAKLEPG 191

Query: 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---DYRKTK 205
               +  G GGVG  VI   K   GAS ++    +  K    KE GA + I   D+ K  
Sbjct: 192 SVCAVF-GLGGVGLAVIMGCKV-AGASRIIGVDINKDKFARAKEFGATECINPQDFSKPI 249

Query: 206 YEDIEEK----FDVLYDTIG 221
            E + E      D  ++ IG
Sbjct: 250 QEVLIEMTDGGVDYSFECIG 269

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 57/264 (21%), Positives = 92/264 (34%), Gaps = 56/264 (21%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +     L + +  +  P+  ++ +QV A  + P D      P   + FP V G + AGIV
Sbjct: 15  WKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINAT-DPKKKALFPVVLGHECAGIV 73

Query: 70  VAKGTSVTKFNTGDEV----------------------------------YGNIQD---- 91
            + G  VT F  GD+V                                     ++D    
Sbjct: 74  ESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSR 133

Query: 92  FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG--FKTAG 145
           F  +G+       + + +++ VV E+ +A+     + E    +     +   G    TA 
Sbjct: 134 FTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGY-GAAINTAK 192

Query: 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---DY 201
              G T  +  G G VG   I   K   GAS ++A   +  K    K LGA   +   + 
Sbjct: 193 VTPGSTCAVF-GLGCVGLSAIIGCKI-AGASRIIAIDINGEKFPKAKALGATDCLNPREL 250

Query: 202 RKTKYEDIEEK----FDVLYDTIG 221
            K   + I E      D   D  G
Sbjct: 251 DKPVQDVITELTAGGVDYSLDCAG 274

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 62.2 bits (152), Expect = 4e-11
 Identities = 52/232 (22%), Positives = 81/232 (34%), Gaps = 41/232 (17%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSDFPAVPGCD 64
               +V    +   P P     +V+  A A     ++ +                + G +
Sbjct: 7   LSIGKV-GWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVF-----EGAIGERHNMILGHE 60

Query: 65  MAGIVVAKGTSVTKFNTGDEV------------------YGNIQDFNAEGKLKQL--GAL 104
             G VV  G+ V  F  GD V                  + +     A  K   +  G  
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVF 120

Query: 105 AEFIVV---EESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGV 161
            EF  V   + +L    PK I  E A  +P  + T   G + A  K G T+ ++ G G V
Sbjct: 121 GEFFHVNDADMNLA-HLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVI-GIGPV 178

Query: 162 GTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEK 212
           G + +  A    GA  + A  S     +   E GA  +I+Y+     DI E+
Sbjct: 179 GLMSVAGAN-HLGAGRIFAVGSRKHCCDIALEYGATDIINYKN---GDIVEQ 226

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 59.5 bits (145), Expect = 3e-10
 Identities = 64/260 (24%), Positives = 94/260 (36%), Gaps = 53/260 (20%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           + P + L L    +  P+  ++ +++ A+ +   DS    + + PS FP + G +  G+V
Sbjct: 16  WEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVL-KEIIPSKFPVILGHEAVGVV 74

Query: 70  VAKGTSVTKFNTGDEV------------------------------YGNIQD----FNAE 95
            + G  VT    GD+V                               G + D    F   
Sbjct: 75  ESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCR 134

Query: 96  GK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG--FKTAGFKTG 149
           GK    L       E+ VV +  +AK       E +  +     T   G    TA    G
Sbjct: 135 GKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGY-GAAVNTAKVTPG 192

Query: 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---DYRKTK 205
            T  + G  GGVG   I   K   GAS ++   T   K     ELGA + +   DY K  
Sbjct: 193 STCAVFG-LGGVGFSAIVGCKA-AGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPI 250

Query: 206 YEDIEEK----FDVLYDTIG 221
           YE I EK     D   +  G
Sbjct: 251 YEVICEKTNGGVDYAVECAG 270

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 43.0 bits (102), Expect = 7e-05
 Identities = 53/322 (16%), Positives = 82/322 (25%), Gaps = 86/322 (26%)

Query: 67  GIVVAKGTSVTKFNTGDEV------------------YGNIQDFNAEGKLKQL------- 101
           G V+ KG  V     GD V                   G     N               
Sbjct: 71  GEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGD 130

Query: 102 --GALAEFIVV---EESLIAKKPKNISFEEAASLPLAVQ----TAIEGFKTAGFKTGQTI 152
             G  AE+++V   + +L+ K P      E       +     T   G  TAG   G T+
Sbjct: 131 WTGGQAEYVLVPYADFNLL-KLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTV 189

Query: 153 FIVGGAGGVGTLVIQLAKHF--------------------YGASHVVATTSTPKVEFVKE 192
           ++ G AG VG      A+                       G      +  TP  E +  
Sbjct: 190 YVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAA 248

Query: 193 L----GADKVID-------YRKTKYEDIEEKFDVLYDTIGDCKN----SFV---VAKDNA 234
           L      D  +D           +    E    VL   +   +           V +D  
Sbjct: 249 LLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPG 308

Query: 235 PIVDITWPPSHP----RAIYSSLTVSG------EILEKLRPFIESGKLK-AQIDPTGPYK 283
            +       S           S +         +    L   I   ++  A++       
Sbjct: 309 AVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVIS 368

Query: 284 FKDVIEAFRYLETGRARGKVVI 305
             D    +   + G  + K VI
Sbjct: 369 LDDAPRGYGEFDAGVPK-KFVI 389

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 136 TAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELG 194
           T   G  +AG K G  ++I  GAG VG      A+   GA+ V+     P+ ++ + + G
Sbjct: 173 TGFHGCVSAGVKPGSHVYIA-GAGPVGRCAAAGARL-LGAACVIVGDQNPERLKLLSDAG 230

Query: 195 ADKVIDYRKTKYEDIEEK 212
            +  ID        + ++
Sbjct: 231 FE-TIDL--RNSAPLRDQ 245

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	327
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.97
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.78
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.72
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.37
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.34
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.24
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.11
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.1
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.09
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.05
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.04
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.85
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.84
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.71
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.54
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.54
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.51
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.49
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.4
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.38
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.36
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.33
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.25
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.2
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.08
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.9
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	96.9
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.86
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.81
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.8
3c85_A	183	Putative glutathione-regulated potassium-efflux S	96.74
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.71
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.71
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.67
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.63
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.62
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.61
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.58
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.49
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.46
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.45
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.45
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.44
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.44
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.42
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.42
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.42
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.41
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.4
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.39
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.39
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.36
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.36
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.35
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.34
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.31
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.3
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.29
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.29
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.27
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.27
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.25
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.24
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.23
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.22
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.22
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.21
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.21
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.21
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.2
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.2
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.2
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.2
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.19
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.18
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.15
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.13
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.12
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.12
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.12
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.11
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.11
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.11
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.11
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.1
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.09
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.09
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.09
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.08
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.08
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.08
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.08
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.08
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.06
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.06
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.05
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.05
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.03
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.03
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.03
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.02
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.01
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.01
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	95.99
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	95.99
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	95.98
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	95.98
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.97
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	95.97
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	95.96
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	95.96
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.96
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	95.94
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	95.94
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	95.93
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	95.92
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	95.92
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	95.92
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	95.92
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.92
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	95.91
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	95.91
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	95.91
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.9
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	95.88
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	95.88
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	95.87
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	95.87
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.86
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	95.84
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	95.84
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	95.84
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	95.83
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	95.82
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	95.82
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.81
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	95.81
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	95.8
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	95.78
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	95.75
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.75
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.74
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	95.74
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	95.74
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	95.72
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	95.72
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	95.72
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	95.72
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.71
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.71
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	95.71
3cxt_A	291	Dehydrogenase with different specificities; rossma	95.71
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	95.7
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.7
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	95.69
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.69
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	95.68
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	95.67
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	95.66
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.66
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.66
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	95.66
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	95.66
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	95.65
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.64
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	95.64
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.64
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	95.64
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.64
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	95.63
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.62
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	95.62
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.61
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.6
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.6
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.59
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	95.59
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	95.59
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	95.58
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	95.57
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	95.57
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	95.54
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.54
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	95.54
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.53
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	95.53
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.52
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.51
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	95.51
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.51
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.51
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.5
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.5
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.48
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	95.48
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	95.48
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	95.45
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	95.44
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.44
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.42
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.42
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.42
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.41
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.39
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.39
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.38
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.38
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.38
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.37
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.35
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.35
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.34
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	95.34
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.34
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.33
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.32
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.32
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.32
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	95.32
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.31
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.29
1spx_A	278	Short-chain reductase family member (5L265); paral	95.28
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.27
1xq1_A	266	Putative tropinone reducatse; structural genomics,	95.26
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	95.25
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.24
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.24
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.23
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.23
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	95.23
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	95.22
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.22
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.21
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.21
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.21
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	95.19
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.17
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	95.17
1xkq_A	280	Short-chain reductase family member (5D234); parra	95.17
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.16
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.15
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.15
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.14
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.13
1xhl_A	297	Short-chain dehydrogenase/reductase family member	95.12
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.12
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.09
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.08
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.07
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.06
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.06
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.05
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.05
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.05
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.05
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.05
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.04
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.04
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.04
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	95.04
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	95.04
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	95.02
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.01
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.01
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	95.01
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	94.96
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	94.94
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	94.94
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	94.93
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	94.93
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	94.93
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	94.92
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	94.91
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	94.87
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	94.87
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	94.85
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	94.81
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	94.79
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	94.75
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	94.72
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	94.65
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.65
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	94.64
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	94.64
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.63
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	94.61
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	94.61
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	94.6
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	94.58
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	94.57
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	94.56
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	94.54
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	94.54
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	94.53
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	94.51
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	94.49
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	94.49
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	94.48
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	94.47
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	94.47
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	94.45
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	94.44
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	94.44
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	94.42
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	94.41
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	94.41
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	94.34
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	94.31
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	94.3
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	94.28
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	94.25
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	94.23
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	94.21
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	94.21
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	94.2
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	94.2
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	94.18
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	94.15
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	94.14
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	94.14
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	94.1
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	94.09
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	94.08
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	94.05
2b25_A	336	Hypothetical protein; structural genomics, methyl	94.04
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	94.01
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	94.01
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	93.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	93.91
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	93.84
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	93.82
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	93.79
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	93.79
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	93.78
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	93.66
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	93.64
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	93.61
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	93.61
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	93.58
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	93.52
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	93.51
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	93.5
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	93.48
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	93.42
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	93.4
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	93.38
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	93.38
1id1_A	153	Putative potassium channel protein; RCK domain, E.	93.35
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	93.32
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	93.27
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	93.25
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	93.23
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	93.23
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	93.22
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	93.21
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	93.16
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	93.15
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	93.14
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	93.12
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	93.1
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	93.09
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	93.06
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	93.03
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	92.99
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	92.98
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	92.88
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	92.82
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	92.8
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	92.79
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	92.78
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	92.71
4f6c_A	427	AUSA reductase domain protein; thioester reductase	92.7
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	92.67
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	92.67
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	92.6
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	92.56
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	92.56
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	92.54
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	92.54
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	92.54
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	92.53
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	92.52
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	92.52
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	92.5
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	92.46
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	92.4
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	92.39
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	92.34
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	92.31
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	92.26
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	92.24
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	92.2
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	92.18
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	92.16
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	92.14
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	92.14
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	92.13
1xxl_A	239	YCGJ protein; structural genomics, protein structu	92.12
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	92.12
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	92.07
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	92.05
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	92.03
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	92.01
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	91.98
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	91.96
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	91.96
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	91.94
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	91.9
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	91.89
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	91.85
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	91.85
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	91.83
3qha_A	296	Putative oxidoreductase; seattle structural genomi	91.83
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	91.82
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	91.8
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	91.77
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	91.73
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	91.72
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	91.67
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	91.66
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	91.66
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	91.65
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	91.62
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	91.62
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	91.58
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	91.55
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	91.54
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	91.51
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	91.46
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	91.46

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=7.9e-51  Score=363.46  Aligned_cols=298  Identities=32%  Similarity=0.493  Sum_probs=260.0

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC-----CCCCCCCcccccccEEEEEeCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-----FPSDFPAVPGCDMAGIVVAKGTS   75 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~-----~~~~~p~~~G~e~~G~V~~vG~~   75 (327)
                      |||++++++++.++.+++++.|.|++++|||||||.+++||++|++.+.|..     ....+|.++|||++|+|+++|++
T Consensus         6 ~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~   85 (321)
T 3tqh_A            6 EMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSD   85 (321)
T ss_dssp             EEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTT
T ss_pred             cceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCC
Confidence            5899999999988889999999999999999999999999999999988831     24568999999999999999999


Q ss_pred             CCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEE
Q 020320           76 VTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIV  155 (327)
Q Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~  155 (327)
                      ++++++||||+++.+.      ....|+|+||++++++.++++|+++++++|+++++++.|||++++.+++++|++|+|+
T Consensus        86 v~~~~~GdrV~~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~  159 (321)
T 3tqh_A           86 VNNVNIGDKVMGIAGF------PDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIH  159 (321)
T ss_dssp             CCSCCTTCEEEEECST------TTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEES
T ss_pred             CCCCCCCCEEEEccCC------CCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEE
Confidence            9999999999987521      1246999999999999999999999999999999999999999988999999999999


Q ss_pred             cCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC-hhhhccCccEEEeCCCCc--hhhhhhhcC
Q 020320          156 GGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK-YEDIEEKFDVLYDTIGDC--KNSFVVAKD  232 (327)
Q Consensus       156 ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~d~v~d~~g~~--~~~~~~l~~  232 (327)
                      ||+|++|++++|+|+.+ |+++++++ +++++++++++|+++++++++.+ +.+..+++|++||++|..  ..+++++++
T Consensus       160 Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~~~~~~~~~l~~  237 (321)
T 3tqh_A          160 AGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKE  237 (321)
T ss_dssp             STTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCHHHHHHHGGGEEE
T ss_pred             cCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCcHHHHHHHHhccC
Confidence            99999999999999998 99877776 55678999999999999988887 777778999999999943  788999999


Q ss_pred             CCcEEEeeCCCCCC---------ceeeE-EeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCce
Q 020320          233 NAPIVDITWPPSHP---------RAIYS-SLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGK  302 (327)
Q Consensus       233 ~g~~v~~g~~~~~~---------~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk  302 (327)
                      +|+++.+|......         ..+.. ......+.++++++++++|++++.  ++++|+++++++||+.+.+++..||
T Consensus       238 ~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gK  315 (321)
T 3tqh_A          238 TGCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIE--ISRIFQLSEAVTAHELLETGHVRGK  315 (321)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSSCCC--EEEEECGGGHHHHHHHHHTTCCCSE
T ss_pred             CCEEEEeCCCCchhhhhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCcccc--cccEEcHHHHHHHHHHHHcCCCCce
Confidence            99999997543111         11111 123356889999999999999975  4789999999999999999999999


Q ss_pred             EEEEeC
Q 020320          303 VVISAF  308 (327)
Q Consensus       303 ~vv~~~  308 (327)
                      +|+++.
T Consensus       316 vvl~~~  321 (321)
T 3tqh_A          316 LVFKVR  321 (321)
T ss_dssp             EEEECC
T ss_pred             EEEEeC
Confidence            999863

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=4.2e-50  Score=361.62  Aligned_cols=302  Identities=23%  Similarity=0.331  Sum_probs=260.8

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||++++++++.+  +++++.|.|++++|||||||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|++++++
T Consensus         2 ~MkA~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~   79 (340)
T 3s2e_A            2 MMKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRV   79 (340)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSC
T ss_pred             ceEEEEEecCCCC--CEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcC
Confidence            6999999988765  999999999999999999999999999999999988754 5689999999999999999999999


Q ss_pred             CCCCEEEE-e----cc--------ccccc-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320           80 NTGDEVYG-N----IQ--------DFNAE-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF  141 (327)
Q Consensus        80 ~~Gd~V~~-~----~~--------~~~~~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  141 (327)
                      ++||||.. +    ++        ..+.|     .+...+|+|+||++++++.++++|+++++++|+.++.++.|||+++
T Consensus        80 ~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l  159 (340)
T 3s2e_A           80 KEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL  159 (340)
T ss_dssp             CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH
Confidence            99999943 2    11        12233     2334679999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc----cCccEEE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE----EKFDVLY  217 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----~~~d~v~  217 (327)
                      +..++++|++|||+| +|++|++++|+|+.+ |+++++++++++++++++++|+++++++++.++.+.+    .++|++|
T Consensus       160 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vi  237 (340)
T 3s2e_A          160 KVTDTRPGQWVVISG-IGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVL  237 (340)
T ss_dssp             HTTTCCTTSEEEEEC-CSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred             HHcCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEE
Confidence            889999999999999 599999999999999 9999999999999999999999999998887766543    3799999


Q ss_pred             eCCCCc---hhhhhhhcCCCcEEEeeCCCCC-----------CceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320          218 DTIGDC---KNSFVVAKDNAPIVDITWPPSH-----------PRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYK  283 (327)
Q Consensus       218 d~~g~~---~~~~~~l~~~g~~v~~g~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~  283 (327)
                      |++|..   ..++.+++++|+++.+|.....           ...+........+.++++++++++|++++.   ++.|+
T Consensus       238 d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~---~~~~~  314 (340)
T 3s2e_A          238 VTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKAT---VSTAK  314 (340)
T ss_dssp             ESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCC---EEEEC
T ss_pred             EeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCce---EEEEe
Confidence            999853   7788999999999999865421           011222233456889999999999999874   47889


Q ss_pred             hhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320          284 FKDVIEAFRYLETGRARGKVVISAFP  309 (327)
Q Consensus       284 ~~~i~~a~~~~~~~~~~gk~vv~~~~  309 (327)
                      ++++++||+.+.+++..||+|+++.+
T Consensus       315 l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          315 LDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             GGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             HHHHHHHHHHHHcCCCceEEEEecCC
Confidence            99999999999999999999999853

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=2e-49  Score=354.96  Aligned_cols=295  Identities=30%  Similarity=0.385  Sum_probs=258.7

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||+++++++|.++.+++++.|.|++++|||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++++
T Consensus         1 MMkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~   80 (325)
T 3jyn_A            1 MAKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFK   80 (325)
T ss_dssp             CEEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CcEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence            79999999999888899999999999999999999999999999999999876667899999999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g  159 (327)
                      +||||++...         ..|+|+||++++++.++++|+++++++|+.++..++|+|+++. ..++++|++|||+||+|
T Consensus        81 ~GdrV~~~~~---------~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g  151 (325)
T 3jyn_A           81 VGDRVAYGTG---------PLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAG  151 (325)
T ss_dssp             TTCEEEESSS---------SSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTS
T ss_pred             CCCEEEEecC---------CCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence            9999997642         4799999999999999999999999999999999999999996 58999999999999999


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      ++|++++++++.+ |+++++++++++++++++++|++++++..+.++.+.+      +++|++||++|..  ..++.+++
T Consensus       152 ~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~  230 (325)
T 3jyn_A          152 GVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVA  230 (325)
T ss_dssp             HHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTTEE
T ss_pred             HHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhc
Confidence            9999999999999 9999999999999999999999999998877766543      3799999999853  67889999


Q ss_pred             CCCcEEEeeCCCCCC--c---------eeeEEe------ecC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHH
Q 020320          232 DNAPIVDITWPPSHP--R---------AIYSSL------TVS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEA  290 (327)
Q Consensus       232 ~~g~~v~~g~~~~~~--~---------~~~~~~------~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a  290 (327)
                      ++|+++.+|......  .         .+....      ...    .+.++++++++++|++++.  ++++|+++++++|
T Consensus       231 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A  308 (325)
T 3jyn_A          231 PRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAAKA  308 (325)
T ss_dssp             EEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHHHH
T ss_pred             CCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCc--cccEEcHHHHHHH
Confidence            999999998654211  0         011110      011    2345689999999999986  4799999999999


Q ss_pred             HHHHHhCCCCceEEEEe
Q 020320          291 FRYLETGRARGKVVISA  307 (327)
Q Consensus       291 ~~~~~~~~~~gk~vv~~  307 (327)
                      |+.+.+++..||+|+.+
T Consensus       309 ~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          309 QIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHHTTCCCSCEEEEC
T ss_pred             HHHHHcCCCCceEEEeC
Confidence            99999999999999874

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=5.4e-49  Score=355.62  Aligned_cols=304  Identities=21%  Similarity=0.233  Sum_probs=258.1

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++...+ +..+++.|.|.|+|++|||||||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|++|+++++
T Consensus         1 MKA~v~~~~~-~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~-~~~p~i~GhE~aG~V~~vG~~V~~~~~   78 (348)
T 4eez_A            1 MKAAVVRHNP-DGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVKEIGADVSSLQV   78 (348)
T ss_dssp             CEEEEECSSC-CSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC-CCTTCBCCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEcCC-CCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC-CCCCcccceeEEEEEEEECceeeeccc
Confidence            9999996533 24599999999999999999999999999999999998764 468999999999999999999999999


Q ss_pred             CCEEEEecc-------------ccccc-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320           82 GDEVYGNIQ-------------DFNAE-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT  143 (327)
Q Consensus        82 Gd~V~~~~~-------------~~~~~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~  143 (327)
                      ||||+....             ..+.|     .+...+|+|+||+.++++.++++|+++++++|++++.++.|+|++++.
T Consensus        79 GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~  158 (348)
T 4eez_A           79 GDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKV  158 (348)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeeecc
Confidence            999976431             11112     234567999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEE
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLY  217 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~  217 (327)
                      .++++|++|+|+| +|++|.+++++++.++|.++++++++++|+++++++|+++++++++.++.+.+      .++|.++
T Consensus       159 ~~~~~g~~VlV~G-aG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~  237 (348)
T 4eez_A          159 SGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAI  237 (348)
T ss_dssp             HTCCTTCEEEEEC-CSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEE
T ss_pred             cCCCCCCEEEEEc-CCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEE
Confidence            9999999999999 69999999999998868899999999999999999999999999888776643      3789999


Q ss_pred             eCCCCc---hhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320          218 DTIGDC---KNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYK  283 (327)
Q Consensus       218 d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~  283 (327)
                      +++++.   ..++.+++++|+++.+|.+....           ..+..+......+++++++++++|++++.   +++|+
T Consensus       238 ~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~p~---~~~~~  314 (348)
T 4eez_A          238 VCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVKPI---VATRK  314 (348)
T ss_dssp             ECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCCCC---EEEEC
T ss_pred             EeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCEEE---EEEEe
Confidence            998753   67889999999999998654211           12223334457889999999999999863   47899


Q ss_pred             hhhHHHHHHHHHhCCCCceEEEEeCCCC
Q 020320          284 FKDVIEAFRYLETGRARGKVVISAFPYT  311 (327)
Q Consensus       284 ~~~i~~a~~~~~~~~~~gk~vv~~~~~~  311 (327)
                      |+++++||+.+.+++..||+|+++...+
T Consensus       315 l~~~~~A~~~l~~g~~~GKvVl~~skL~  342 (348)
T 4eez_A          315 LEEINDIIDEMKAGKIEGRMVIDFTKLE  342 (348)
T ss_dssp             GGGHHHHHHHHHTTCCSSEEEEECC---
T ss_pred             HHHHHHHHHHHHCCCCccEEEEEccccc
Confidence            9999999999999999999999997665

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=2.3e-49  Score=357.89  Aligned_cols=298  Identities=21%  Similarity=0.273  Sum_probs=254.3

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++.++++.  ++++++|.|++++|||||||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++++
T Consensus         4 ~mka~~~~~~~~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~   81 (348)
T 3two_A            4 QSKGFAIFSKDEH--FKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFK   81 (348)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEEccCCCC--CeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCC
Confidence            5899999988654  99999999999999999999999999999999999877778899999999999999999999999


Q ss_pred             CCCEEEEec-------------ccccccC----cC----------CCCCceeeEEEeeccceecCCCCCCHHhhcccchH
Q 020320           81 TGDEVYGNI-------------QDFNAEG----KL----------KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLA  133 (327)
Q Consensus        81 ~Gd~V~~~~-------------~~~~~~~----~~----------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  133 (327)
                      +||||+...             +.++.|.    +.          ...|+|+||+++++++++++|+++++++|+.++.+
T Consensus        82 vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  161 (348)
T 3two_A           82 IGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCA  161 (348)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTH
T ss_pred             CCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhh
Confidence            999997632             1223332    11          12399999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCc
Q 020320          134 VQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKF  213 (327)
Q Consensus       134 ~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  213 (327)
                      +.|||+++.+.++++|++|||+| +|++|++++|+|+.+ |+++++++.+++++++++++|+++++ .+.+.   ..+++
T Consensus       162 ~~ta~~~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~---~~~~~  235 (348)
T 3two_A          162 GITTYSPLKFSKVTKGTKVGVAG-FGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMGVKHFY-TDPKQ---CKEEL  235 (348)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEES-CSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTTCSEEE-SSGGG---CCSCE
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCeec-CCHHH---HhcCC
Confidence            99999999988999999999999 599999999999998 99998889999999999999999988 32222   22389


Q ss_pred             cEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC-CCCc-------------eeeEEeecCHHHHHHHHhHHHCCCceeee
Q 020320          214 DVLYDTIGDC---KNSFVVAKDNAPIVDITWPP-SHPR-------------AIYSSLTVSGEILEKLRPFIESGKLKAQI  276 (327)
Q Consensus       214 d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~-~~~~-------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~  276 (327)
                      |++||++|..   ..++.+++++|+++.+|... ....             .+........+.++++++++++|++++. 
T Consensus       236 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~-  314 (348)
T 3two_A          236 DFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIYPE-  314 (348)
T ss_dssp             EEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCCCC-
T ss_pred             CEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCCce-
Confidence            9999999843   78899999999999998655 2111             1111223345789999999999999874 


Q ss_pred             CCCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320          277 DPTGPYKFKDVIEAFRYLETGRARGKVVISAFP  309 (327)
Q Consensus       277 ~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~  309 (327)
                        +++|+++++++||+.+.+++..||+|+++++
T Consensus       315 --~~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~  345 (348)
T 3two_A          315 --IDLILGKDIDTAYHNLTHGKAKFRYVIDMKK  345 (348)
T ss_dssp             --EEEECGGGHHHHHHHHHTTCCCSEEEEEGGG
T ss_pred             --EEEEEHHHHHHHHHHHHcCCCceEEEEecCC
Confidence              4799999999999999999999999999864

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.6e-49  Score=360.74  Aligned_cols=301  Identities=28%  Similarity=0.377  Sum_probs=257.0

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||++++++++ ++.+++.+.|.|++++|||||||.+++||++|++.+.|.++ ...+|.++|||++|+|+++|++++++
T Consensus        27 ~mkA~~~~~~~-~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~  105 (363)
T 3uog_A           27 WMQEWSTETVA-PHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRF  105 (363)
T ss_dssp             EEEEEEBSCTT-TTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             hhEEEEEccCC-CCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCCCC
Confidence            49999999883 35599999999999999999999999999999999988764 45789999999999999999999999


Q ss_pred             CCCCEEEEecc-----cccccC---------cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-Hhc
Q 020320           80 NTGDEVYGNIQ-----DFNAEG---------KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTA  144 (327)
Q Consensus        80 ~~Gd~V~~~~~-----~~~~~~---------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~  144 (327)
                      ++||||++...     +.+.|.         +...+|+|+||+++++++++++|+++++++|++++.++.|||+++ +.+
T Consensus       106 ~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~  185 (363)
T 3uog_A          106 RPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKG  185 (363)
T ss_dssp             CTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTT
T ss_pred             CCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhc
Confidence            99999998632     112332         234579999999999999999999999999999999999999999 579


Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEe
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYD  218 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d  218 (327)
                      ++++|++|||+| +|++|++++|+|+.+ |+++++++++++++++++++|++++++....++.+.+      +++|++||
T Consensus       186 ~~~~g~~VlV~G-~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid  263 (363)
T 3uog_A          186 HLRAGDRVVVQG-TGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILE  263 (363)
T ss_dssp             CCCTTCEEEEES-SBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEE
Confidence            999999999999 899999999999998 9999999999999999999999999995545655432      37999999


Q ss_pred             CCCC--chhhhhhhcCCCcEEEeeCCCCCC------------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccch
Q 020320          219 TIGD--CKNSFVVAKDNAPIVDITWPPSHP------------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKF  284 (327)
Q Consensus       219 ~~g~--~~~~~~~l~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~  284 (327)
                      ++|.  ...++.+++++|+++.+|......            ..+........+.++++++++++|++++.  ++++|++
T Consensus       264 ~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l  341 (363)
T 3uog_A          264 IAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLKPV--IDMRYKF  341 (363)
T ss_dssp             ETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHHHHHHTCCCC--EEEEEEG
T ss_pred             CCChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHHHHcCCCccc--eeeEEcH
Confidence            9984  378899999999999998654211            11112223346889999999999998764  4689999


Q ss_pred             hhHHHHHHHHHhCCCCceEEEEe
Q 020320          285 KDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       285 ~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +++++||+.+.+++ .+|+|+++
T Consensus       342 ~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          342 TEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             GGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHHHHHHHHHHcCC-CccEEEeC
Confidence            99999999999988 89999975

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=2e-49  Score=358.79  Aligned_cols=294  Identities=28%  Similarity=0.474  Sum_probs=257.1

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||+++++++|.++.+++.+.|.|++++|||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|++++++
T Consensus        28 ~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~  107 (353)
T 4dup_A           28 EMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGY  107 (353)
T ss_dssp             SEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTTCCSC
T ss_pred             heeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCCCCCC
Confidence            699999999988888999999999999999999999999999999999887743 3578999999999999999999999


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCC
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGA  158 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~  158 (327)
                      ++||||+++.          ..|+|+||++++++.++++|+++++++|+.++.++.|||+++ +.+++++|++|||+||+
T Consensus       108 ~vGdrV~~~~----------~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~  177 (353)
T 4dup_A          108 AVGDKVCGLA----------NGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGT  177 (353)
T ss_dssp             CTTCEEEEEC----------SSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTT
T ss_pred             CCCCEEEEec----------CCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            9999999875          479999999999999999999999999999999999999999 57999999999999989


Q ss_pred             chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--hhhhhhhc
Q 020320          159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       159 g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      |++|++++++|+.+ |+++++++++++++++++++|++.+++.++.++.+..     +++|++||++|..  ..++.+++
T Consensus       178 g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~  256 (353)
T 4dup_A          178 SGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAYFERNIASLA  256 (353)
T ss_dssp             SHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGGGHHHHHHTEE
T ss_pred             CHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHHHHHHHHHHhc
Confidence            99999999999998 9999999999999999999999999998877766543     4799999999853  77889999


Q ss_pred             CCCcEEEeeCCCCCCce-------------eeEEeec--C--------HHHHHHHHhHHHCCCceeeeCCCcccchhhHH
Q 020320          232 DNAPIVDITWPPSHPRA-------------IYSSLTV--S--------GEILEKLRPFIESGKLKAQIDPTGPYKFKDVI  288 (327)
Q Consensus       232 ~~g~~v~~g~~~~~~~~-------------~~~~~~~--~--------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~  288 (327)
                      ++|+++.+|........             +......  .        .+.++++++++++|++++.  ++++|++++++
T Consensus       257 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~  334 (353)
T 4dup_A          257 KDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPV--IHKVFAFEDVA  334 (353)
T ss_dssp             EEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCC--EEEEEEGGGHH
T ss_pred             cCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCC--cceEEeHHHHH
Confidence            99999999865432111             1111100  1        1227889999999999864  47899999999


Q ss_pred             HHHHHHHhCCCCceEEEEe
Q 020320          289 EAFRYLETGRARGKVVISA  307 (327)
Q Consensus       289 ~a~~~~~~~~~~gk~vv~~  307 (327)
                      +||+.+.+++..||+|+++
T Consensus       335 ~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          335 DAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHhCCCCceEEEeC
Confidence            9999999999999999874

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=2.3e-49  Score=356.76  Aligned_cols=300  Identities=18%  Similarity=0.254  Sum_probs=258.8

Q ss_pred             CceeEEecccCCC-cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCC
Q 020320            1 MQNAWYYEEYGPK-EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         1 ~~~~~v~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      +||+++++++|.+ +.+++++.|.|++++|||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus         4 ~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~   83 (340)
T 3gms_A            4 HGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSR   83 (340)
T ss_dssp             EEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSCG
T ss_pred             ccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCCC
Confidence            5899999999987 67999999999999999999999999999999999987753 578999999999999999999999


Q ss_pred             CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcC
Q 020320           79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGG  157 (327)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga  157 (327)
                      +++||||+++.          ..|+|+||++++++.++++|+++++++|+.+++.++|+|+++ +.+++++|++|||+|+
T Consensus        84 ~~vGdrV~~~~----------~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga  153 (340)
T 3gms_A           84 ELIGKRVLPLR----------GEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNAC  153 (340)
T ss_dssp             GGTTCEEEECS----------SSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCEEEecC----------CCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCC
Confidence            99999999864          479999999999999999999999999999999999999998 5799999999999998


Q ss_pred             CchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhh
Q 020320          158 AGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVV  229 (327)
Q Consensus       158 ~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~  229 (327)
                      +|++|++++++|+.+ |++++++++++++++.++++|++++++..+.++.+..      .++|++||++|..  ...+.+
T Consensus       154 ~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~  232 (340)
T 3gms_A          154 GSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFS  232 (340)
T ss_dssp             TSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCChhHHHHHHH
Confidence            889999999999999 9999999999999999999999999998877766543      3799999999954  566789


Q ss_pred             hcCCCcEEEeeCCCCCCc---------eeeEE-ee-----------cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHH
Q 020320          230 AKDNAPIVDITWPPSHPR---------AIYSS-LT-----------VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVI  288 (327)
Q Consensus       230 l~~~g~~v~~g~~~~~~~---------~~~~~-~~-----------~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~  288 (327)
                      ++++|+++.+|.....+.         .+... +.           ...+.++++++++++|++++.. ++++|++++++
T Consensus       233 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~  311 (340)
T 3gms_A          233 LRPNGHFLTIGLLSGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVK  311 (340)
T ss_dssp             EEEEEEEEECCCTTSCCCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHH
T ss_pred             hcCCCEEEEEeecCCCCCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHHH
Confidence            999999999987543221         11111 11           1146789999999999999753 47899999999


Q ss_pred             HHHHHHHhCCC-CceEEEEeCCCCC
Q 020320          289 EAFRYLETGRA-RGKVVISAFPYTE  312 (327)
Q Consensus       289 ~a~~~~~~~~~-~gk~vv~~~~~~~  312 (327)
                      +||+.+.+++. .||+++++.+..+
T Consensus       312 ~A~~~~~~~~~~~GKvvl~~~~~~~  336 (340)
T 3gms_A          312 AAVDVVQSAEKTKGKVFLTSYEGHH  336 (340)
T ss_dssp             HHHHHHHCTTCCSSEEEEECC----
T ss_pred             HHHHHHHhcCCCCCeEEEEEecccc
Confidence            99999999885 4999999976543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=9.4e-49  Score=353.50  Aligned_cols=298  Identities=22%  Similarity=0.304  Sum_probs=256.1

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC--CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF--PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      ||++++++++++  ++++++|.|++++|||||||.+++||++|++.+.+.++  ...+|.++|||++|+|+++|++++++
T Consensus         1 MkA~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   78 (345)
T 3jv7_A            1 MKAVQYTEIGSE--PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGF   78 (345)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEcCCCCc--eEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCC
Confidence            899999999875  89999999999999999999999999999999988753  35689999999999999999999999


Q ss_pred             CCCCEEEEecc------------ccccc----------CcCCCCCceeeEEEee-ccceecCCCCCCHHhhcccchHHHH
Q 020320           80 NTGDEVYGNIQ------------DFNAE----------GKLKQLGALAEFIVVE-ESLIAKKPKNISFEEAASLPLAVQT  136 (327)
Q Consensus        80 ~~Gd~V~~~~~------------~~~~~----------~~~~~~g~~~~~~~v~-~~~~~~~p~~~~~~~aa~~~~~~~t  136 (327)
                      ++||||++...            ..+.|          .+...+|+|+||++++ ++.++++|+ +++++|+.++.++.|
T Consensus        79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~t  157 (345)
T 3jv7_A           79 GVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLT  157 (345)
T ss_dssp             CTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHH
T ss_pred             CCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHH
Confidence            99999987531            23444          3445689999999999 999999999 999999999999999


Q ss_pred             HHHHHHhc--CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc----
Q 020320          137 AIEGFKTA--GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE----  210 (327)
Q Consensus       137 a~~~l~~~--~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----  210 (327)
                      ||+++.+.  ++++|++|+|+| +|++|++++|+||++++.++++++.+++++++++++|+++++++++ ++.+.+    
T Consensus       158 a~~~l~~~~~~~~~g~~vlv~G-aG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~~t  235 (345)
T 3jv7_A          158 PYHAISRVLPLLGPGSTAVVIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-GAADAIRELT  235 (345)
T ss_dssp             HHHHHHTTGGGCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-THHHHHHHHH
T ss_pred             HHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHHHh
Confidence            99999764  899999999999 5999999999999996778888889999999999999999998765 444332    


Q ss_pred             --cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCcee
Q 020320          211 --EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKA  274 (327)
Q Consensus       211 --~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~  274 (327)
                        +++|++||++|..   ..++.+++++|+++.+|.....+.           .+........+.++++++++++|++++
T Consensus       236 ~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~  315 (345)
T 3jv7_A          236 GGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLDI  315 (345)
T ss_dssp             GGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEESTTTSCTTCEEECCCSCCHHHHHHHHHHHHTTCCCC
T ss_pred             CCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCce
Confidence              3899999999964   788999999999999986543111           111122334688999999999999987


Q ss_pred             eeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          275 QIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       275 ~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      .   +++|+++++++||+.+.+++..||+|+.+
T Consensus       316 ~---~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          316 H---TETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             C---EEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             E---EEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            3   58999999999999999999999999864

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=5.2e-49  Score=357.10  Aligned_cols=302  Identities=31%  Similarity=0.456  Sum_probs=254.6

Q ss_pred             CceeEEeccc---CCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCC
Q 020320            1 MQNAWYYEEY---GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         1 ~~~~~v~~~~---~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      |||+++++++   +.++.+++.++|.|.+++|||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++++
T Consensus        22 ~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~  101 (363)
T 4dvj_A           22 SMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVT  101 (363)
T ss_dssp             EEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECTTCC
T ss_pred             eeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCCCCC
Confidence            5899999988   4556799999999999999999999999999999999988876667899999999999999999999


Q ss_pred             CCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCC-----CCCE
Q 020320           78 KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFK-----TGQT  151 (327)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~-----~~~~  151 (327)
                      ++++||||++..       .....|+|+||++++++.++++|+++++++|++++++++|||+++ +..+++     +|++
T Consensus       102 ~~~vGdrV~~~~-------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~  174 (363)
T 4dvj_A          102 LFRPGDEVFYAG-------SIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPA  174 (363)
T ss_dssp             SCCTTCEEEECC-------CTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEE
T ss_pred             CCCCCCEEEEcc-------CCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCE
Confidence            999999999753       123579999999999999999999999999999999999999999 468887     8999


Q ss_pred             EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc---
Q 020320          152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC---  223 (327)
Q Consensus       152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~---  223 (327)
                      |||+||+|++|++++|+||.++|+++++++++++++++++++|+++++++.+ ++.+.+     +++|++||++|..   
T Consensus       175 VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~~~~v~~~~~~g~Dvvid~~g~~~~~  253 (363)
T 4dvj_A          175 ILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PLAAEVAALGLGAPAFVFSTTHTDKHA  253 (363)
T ss_dssp             EEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CHHHHHHTTCSCCEEEEEECSCHHHHH
T ss_pred             EEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CHHHHHHHhcCCCceEEEECCCchhhH
Confidence            9999999999999999999865889999999999999999999999998765 344332     4799999999943   


Q ss_pred             hhhhhhhcCCCcEEEeeCCCCCCc--------eeeEEeecC------------HHHHHHHHhHHHCCCceeeeCCC-ccc
Q 020320          224 KNSFVVAKDNAPIVDITWPPSHPR--------AIYSSLTVS------------GEILEKLRPFIESGKLKAQIDPT-GPY  282 (327)
Q Consensus       224 ~~~~~~l~~~g~~v~~g~~~~~~~--------~~~~~~~~~------------~~~~~~~~~l~~~g~~~~~~~~~-~~~  282 (327)
                      ..++.+++++|+++.++.+...+.        .+.......            .+.++++++++++|++++.+..+ +.|
T Consensus       254 ~~~~~~l~~~G~iv~~g~~~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~  333 (363)
T 4dvj_A          254 AEIADLIAPQGRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPI  333 (363)
T ss_dssp             HHHHHHSCTTCEEEECSCCSSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEECSC
T ss_pred             HHHHHHhcCCCEEEEECCCCccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeeccccceecCC
Confidence            778899999999999975432211        111111111            35689999999999998754211 245


Q ss_pred             chhhHHHHHHHHHhCCCCceEEEEeCCC
Q 020320          283 KFKDVIEAFRYLETGRARGKVVISAFPY  310 (327)
Q Consensus       283 ~~~~i~~a~~~~~~~~~~gk~vv~~~~~  310 (327)
                      +++++++||+.+.+++..||+|+++...
T Consensus       334 ~l~~~~~A~~~~~~~~~~GKvVl~~~~~  361 (363)
T 4dvj_A          334 NAANLKQAHALVESGTARGKVVIEGFGL  361 (363)
T ss_dssp             SHHHHHHHHHHHHHTCCCSEEEEECSCC
T ss_pred             CHHHHHHHHHHHHhCCCceEEEEeCccc
Confidence            9999999999999999999999998654

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=5.4e-49  Score=359.20  Aligned_cols=303  Identities=21%  Similarity=0.254  Sum_probs=256.4

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++++++++  ++++++|.|++++|||||||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++++
T Consensus         8 tmkA~v~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   85 (378)
T 3uko_A            8 TCKAAVAYEPNKP--LVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ   85 (378)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             eeEEEEEecCCCc--cEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCCcCC
Confidence            6999999998875  99999999999999999999999999999999999877778899999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcC---------------------------CCCCceeeEEEeeccceecCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKL---------------------------KQLGALAEFIVVEESLIAKKPKN  121 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~---------------------------~~~g~~~~~~~v~~~~~~~~p~~  121 (327)
                      +||||++...            .++.|...                           ...|+|+||++++++.++++|++
T Consensus        86 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  165 (378)
T 3uko_A           86 AGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPT  165 (378)
T ss_dssp             TTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECCCC
Confidence            9999986542            22333221                           11369999999999999999999


Q ss_pred             CCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEE
Q 020320          122 ISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVI  199 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~  199 (327)
                      +++++|+++++++.|||+++ +..++++|++|||+|+ |++|++++|+||.+ |+ ++++++.+++|+++++++|+++++
T Consensus       166 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  243 (378)
T 3uko_A          166 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTA-GASRIIGIDIDSKKYETAKKFGVNEFV  243 (378)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHH-TCSCEEEECSCTTHHHHHHTTTCCEEE
T ss_pred             CCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCcEEE
Confidence            99999999999999999998 5689999999999994 99999999999999 88 788888899999999999999999


Q ss_pred             eCC--CCChhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCCCc------------eeeEEee--
Q 020320          200 DYR--KTKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSHPR------------AIYSSLT--  254 (327)
Q Consensus       200 ~~~--~~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~~~------------~~~~~~~--  254 (327)
                      +++  +.++.+.+     .++|++||++|..   ..++.+++++ |+++.+|.......            .+.....  
T Consensus       244 ~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  323 (378)
T 3uko_A          244 NPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG  323 (378)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             ccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEEecC
Confidence            876  45554432     3799999999963   6788999996 99999986542111            0111111  


Q ss_pred             -cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          255 -VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       255 -~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                       ...+.++++++++++|++++.++++++|+++++++||+.+.+++.. |+|+++.
T Consensus       324 ~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~  377 (378)
T 3uko_A          324 FKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTS  377 (378)
T ss_dssp             CCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETT
T ss_pred             CCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecC
Confidence             1347799999999999999766678999999999999999887765 9999875

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.3e-48  Score=352.66  Aligned_cols=299  Identities=29%  Similarity=0.427  Sum_probs=251.9

Q ss_pred             CceeEEecccC---CCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCC
Q 020320            1 MQNAWYYEEYG---PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         1 ~~~~~v~~~~~---~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      |||+++++++|   .++.+++.++|.|.+++|||||||.+++||++|++.+.+.  ...+|.++|||++|+|+++|++++
T Consensus         2 ~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v~   79 (346)
T 3fbg_A            2 SLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEVT   79 (346)
T ss_dssp             CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTCC
T ss_pred             CcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCCC
Confidence            79999999998   5567999999999999999999999999999999998876  456899999999999999999999


Q ss_pred             CCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCC------CCC
Q 020320           78 KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFK------TGQ  150 (327)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~------~~~  150 (327)
                      ++++||||++...       ....|+|+||++++++.++++|+++++++|+++++++.|||+++. ..+++      +|+
T Consensus        80 ~~~~GdrV~~~~~-------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~  152 (346)
T 3fbg_A           80 MFNQGDIVYYSGS-------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGK  152 (346)
T ss_dssp             SCCTTCEEEECCC-------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTC
T ss_pred             cCCCCCEEEEcCC-------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCC
Confidence            9999999998631       234799999999999999999999999999999999999999994 68888      999


Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--  223 (327)
                      +|||+||+|++|++++|+|+.+ |+++++++++++++++++++|+++++++++ ++.+.+     +++|++||++|..  
T Consensus       153 ~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~~~g~Dvv~d~~g~~~~  230 (346)
T 3fbg_A          153 TLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGADIVLNHKE-SLLNQFKTQGIELVDYVFCTFNTDMY  230 (346)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTCSEEECTTS-CHHHHHHHHTCCCEEEEEESSCHHHH
T ss_pred             EEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cHHHHHHHhCCCCccEEEECCCchHH
Confidence            9999988999999999999998 999998889999999999999999998765 343332     4799999999943  


Q ss_pred             -hhhhhhhcCCCcEEEeeCCCCC---------CceeeEEeecC------------HHHHHHHHhHHHCCCceeeeCCCcc
Q 020320          224 -KNSFVVAKDNAPIVDITWPPSH---------PRAIYSSLTVS------------GEILEKLRPFIESGKLKAQIDPTGP  281 (327)
Q Consensus       224 -~~~~~~l~~~g~~v~~g~~~~~---------~~~~~~~~~~~------------~~~~~~~~~l~~~g~~~~~~~~~~~  281 (327)
                       ..++.+++++|+++.++.....         ...+.......            .+.++++++++++|++++.+  +++
T Consensus       231 ~~~~~~~l~~~G~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i--~~~  308 (346)
T 3fbg_A          231 YDDMIQLVKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTT--TKV  308 (346)
T ss_dssp             HHHHHHHEEEEEEEEESSCCSSCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCE--EEE
T ss_pred             HHHHHHHhccCCEEEEECCCCCCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCc--cce
Confidence             6788999999999988643211         01111111111            35688999999999998653  455


Q ss_pred             c---chhhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 020320          282 Y---KFKDVIEAFRYLETGRARGKVVISAFPYTE  312 (327)
Q Consensus       282 ~---~~~~i~~a~~~~~~~~~~gk~vv~~~~~~~  312 (327)
                      |   +++++++||+.+.+++..||+|+.+++-.+
T Consensus       309 ~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~~~  342 (346)
T 3fbg_A          309 IEGLTTENIYQAHQILESNTMIGKLVINLNEGHH  342 (346)
T ss_dssp             EESCCHHHHHHHHHHHHTTCCCSEEEEEC-----
T ss_pred             ecCCCHHHHHHHHHHHhcCCcceEEEEecCCccc
Confidence            5   999999999999999999999999976543

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=4.9e-49  Score=353.85  Aligned_cols=293  Identities=26%  Similarity=0.343  Sum_probs=255.7

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||+++++++++++.+++++.|.|++++|||||||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|+++++++
T Consensus         8 ~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~vG~~v~~~~   86 (334)
T 3qwb_A            8 QQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKGKGVTNFE   86 (334)
T ss_dssp             EEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEECTTCCSCC
T ss_pred             heEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEECCCCCCCC
Confidence            59999999999888899999999999999999999999999999999988765 45899999999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEee-ccceecCCCCCCHHh---hcccchHHHHHHHHHH-hcCCCCCCEEEEE
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVE-ESLIAKKPKNISFEE---AASLPLAVQTAIEGFK-TAGFKTGQTIFIV  155 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~~~~~p~~~~~~~---aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~  155 (327)
                      +||||+++.           .|+|+||++++ ++.++++|+++++++   |+.++..+.|||+++. ..++++|++|||+
T Consensus        87 ~GdrV~~~~-----------~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~  155 (334)
T 3qwb_A           87 VGDQVAYIS-----------NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLF  155 (334)
T ss_dssp             TTCEEEEEC-----------SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEES
T ss_pred             CCCEEEEee-----------CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEE
Confidence            999999874           69999999999 999999999999999   7778888999999996 4799999999999


Q ss_pred             cCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCC--chhhh
Q 020320          156 GGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGD--CKNSF  227 (327)
Q Consensus       156 ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~--~~~~~  227 (327)
                      ||+|++|++++++++.+ |+++++++++++++++++++|++++++.++.++.+..      +++|++||++|.  ...++
T Consensus       156 Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~  234 (334)
T 3qwb_A          156 AAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISL  234 (334)
T ss_dssp             STTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGGGHHHHH
T ss_pred             CCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChHHHHHHH
Confidence            99999999999999998 9999999999999999999999999998877765543      479999999985  37788


Q ss_pred             hhhcCCCcEEEeeCCCCCCc----------eeeEE------eecCH----HHHHHHHhHHHCCCceeeeCCCcccchhhH
Q 020320          228 VVAKDNAPIVDITWPPSHPR----------AIYSS------LTVSG----EILEKLRPFIESGKLKAQIDPTGPYKFKDV  287 (327)
Q Consensus       228 ~~l~~~g~~v~~g~~~~~~~----------~~~~~------~~~~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i  287 (327)
                      .+++++|+++.+|.......          .+...      .....    +.++++++++++|++++.  ++++|+++++
T Consensus       235 ~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~  312 (334)
T 3qwb_A          235 AALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDY  312 (334)
T ss_dssp             HHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC--EEEEEEGGGH
T ss_pred             HHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc--eeeEEcHHHH
Confidence            99999999999986432110          11111      00122    345789999999999975  4789999999


Q ss_pred             HHHHHHHHhCCCCceEEEEeC
Q 020320          288 IEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       288 ~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      ++||+.+.+++..||+|++++
T Consensus       313 ~~A~~~~~~~~~~gKvvi~~~  333 (334)
T 3qwb_A          313 RTAAADIESRKTVGKLVLEIP  333 (334)
T ss_dssp             HHHHHHHHTTCCCBEEEEECC
T ss_pred             HHHHHHHHhCCCceEEEEecC
Confidence            999999999999999999985

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=3e-49  Score=352.40  Aligned_cols=289  Identities=25%  Similarity=0.381  Sum_probs=242.8

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++++  .++.+++.+.|.|++++|||||||.+++||++|++.+.+.++...+|.++|||++|+|+++|+++++++
T Consensus         4 tMka~~~~~--~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   81 (315)
T 3goh_A            4 QHQVWAYQT--KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKM   81 (315)
T ss_dssp             EEEEEEEET--TTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGG
T ss_pred             ceEEEEEeC--CCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCC
Confidence            699999985  234599999999999999999999999999999999988876678899999999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCch
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGG  160 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~  160 (327)
                      +||||++..+       ...+|+|+||++++++.++++|+++++++|+.++.+++|||++++.+++++|++|||+|+ |+
T Consensus        82 vGdrV~~~~~-------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~Ga-G~  153 (315)
T 3goh_A           82 LGRRVAYHTS-------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGF-GA  153 (315)
T ss_dssp             TTCEEEEECC-------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECC-SH
T ss_pred             CCCEEEEeCC-------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECC-CH
Confidence            9999998752       224799999999999999999999999999999999999999998899999999999997 99


Q ss_pred             HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--hhhhhhhcCCCcEEE
Q 020320          161 VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--KNSFVVAKDNAPIVD  238 (327)
Q Consensus       161 ~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--~~~~~~l~~~g~~v~  238 (327)
                      +|++++|+||.+ |+++++++ +++++++++++|++++++  +  ..+..+++|++||++|..  ..++.+++++|+++.
T Consensus       154 vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~lGa~~v~~--d--~~~v~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~  227 (315)
T 3goh_A          154 VNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKRGVRHLYR--E--PSQVTQKYFAIFDAVNSQNAAALVPSLKANGHIIC  227 (315)
T ss_dssp             HHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHHTEEEEES--S--GGGCCSCEEEEECC-------TTGGGEEEEEEEEE
T ss_pred             HHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHcCCCEEEc--C--HHHhCCCccEEEECCCchhHHHHHHHhcCCCEEEE
Confidence            999999999999 99888888 999999999999999984  1  222246899999999843  678899999999999


Q ss_pred             eeCCCCCC-------ceeeEEeec-------C-------HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhC
Q 020320          239 ITWPPSHP-------RAIYSSLTV-------S-------GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETG  297 (327)
Q Consensus       239 ~g~~~~~~-------~~~~~~~~~-------~-------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~  297 (327)
                      ++......       ........+       .       .+.++++++++++|++++  .++++|+++++++||+.+.  
T Consensus       228 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~--  303 (315)
T 3goh_A          228 IQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEI--AAPDIFRFEQMIEALDHSE--  303 (315)
T ss_dssp             ECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCC--CCCEEEEGGGHHHHHHHHH--
T ss_pred             EeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCccc--ccceEecHHHHHHHHHHHH--
Confidence            97543111       011111211       1       134788999999999986  4579999999999999998  


Q ss_pred             CCCceEEEEeCC
Q 020320          298 RARGKVVISAFP  309 (327)
Q Consensus       298 ~~~gk~vv~~~~  309 (327)
                      ...+|+|+++++
T Consensus       304 ~~~gKvvi~~~~  315 (315)
T 3goh_A          304 QTKLKTVLTLNE  315 (315)
T ss_dssp             HHCCCEEEESCC
T ss_pred             hcCCcEEEEecC
Confidence            677899999853

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=8.3e-49  Score=353.21  Aligned_cols=291  Identities=23%  Similarity=0.326  Sum_probs=250.4

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||+++++.++.++.+++++.|.|++++|||||||.+++||++|++.+.|.++ ...+|.++|||++|+|+++|++++ +
T Consensus        21 ~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~-~   99 (342)
T 4eye_A           21 SMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSG-I   99 (342)
T ss_dssp             EEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTTSS-C
T ss_pred             ceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCCCC-C
Confidence            69999999998887899999999999999999999999999999999998764 346899999999999999999999 9


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCC
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGA  158 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~  158 (327)
                      ++||||+++.          ..|+|+||++++++.++++|+++++++|+.++.++.|||+++ +.+++++|++|||+|++
T Consensus       100 ~vGDrV~~~~----------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gas  169 (342)
T 4eye_A          100 KPGDRVMAFN----------FIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAA  169 (342)
T ss_dssp             CTTCEEEEEC----------SSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred             CCCCEEEEec----------CCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence            9999999875          479999999999999999999999999999999999999999 57999999999999988


Q ss_pred             chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCC--chhhhhhh
Q 020320          159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGD--CKNSFVVA  230 (327)
Q Consensus       159 g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~--~~~~~~~l  230 (327)
                      |++|++++++|+.+ |+++++++++++++++++++|++.+++.. .++.+.+      +++|++||++|.  ...++.++
T Consensus       170 g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~l  247 (342)
T 4eye_A          170 GGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTL  247 (342)
T ss_dssp             SHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC--CHHHHHHTE
T ss_pred             CHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchhHHHHHHHhh
Confidence            99999999999998 99999999999999999999999999887 6555432      379999999985  37888999


Q ss_pred             cCCCcEEEeeCCCCCCc----------eeeE-Eeec----------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHH
Q 020320          231 KDNAPIVDITWPPSHPR----------AIYS-SLTV----------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIE  289 (327)
Q Consensus       231 ~~~g~~v~~g~~~~~~~----------~~~~-~~~~----------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~  289 (327)
                      +++|+++.+|.......          .... ....          ..+.++.+++++++| +++.  ++++|+++++++
T Consensus       248 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~--i~~~~~l~~~~~  324 (342)
T 4eye_A          248 ASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPP--VSARIPLSEGRQ  324 (342)
T ss_dssp             EEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCC--EEEEEEGGGHHH
T ss_pred             cCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCC--cceEEeHHHHHH
Confidence            99999999985432110          0001 1110          125688999999999 7664  368999999999


Q ss_pred             HHHHHHhCCCCceEEEEe
Q 020320          290 AFRYLETGRARGKVVISA  307 (327)
Q Consensus       290 a~~~~~~~~~~gk~vv~~  307 (327)
                      ||+.+.+++..||+|+++
T Consensus       325 A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          325 ALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHhCCCCceEEEeC
Confidence            999999999999999874

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.5e-48  Score=352.49  Aligned_cols=295  Identities=25%  Similarity=0.358  Sum_probs=247.9

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||++++++++.++.+++.+.|.|++++|||+|||.+++||++|++.+.|.++ ...+|.++|||++|+|+++|++++++
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~   82 (349)
T 4a27_A            3 EMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY   82 (349)
T ss_dssp             CEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCSC
T ss_pred             eeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCCC
Confidence            79999999999877799999999999999999999999999999999998764 35789999999999999999999999


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCC
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGA  158 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~  158 (327)
                      ++||||+++.          .+|+|+||++++++.++++|+++++++|+.++.++.|||+++ +.+++++|++|+|+|++
T Consensus        83 ~~GdrV~~~~----------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~  152 (349)
T 4a27_A           83 EIGDRVMAFV----------NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAG  152 (349)
T ss_dssp             CTTCEEEEEC----------SSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred             CCCCEEEEec----------CCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            9999999875          469999999999999999999999999999999999999999 56899999999999988


Q ss_pred             chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--hhhhhhhc
Q 020320          159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       159 g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      |++|++++|+|+.+++.+++.+. ++++.+.++ +|++++++ ...++.+..     +++|++||++|..  ..++.+++
T Consensus       153 G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~l~  229 (349)
T 4a27_A          153 GGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLK  229 (349)
T ss_dssp             SHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEECC-------CTTEE
T ss_pred             cHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceEEEECCCchhHHHHHHHhh
Confidence            99999999999998445555554 777888888 99999998 666655543     4799999999843  77889999


Q ss_pred             CCCcEEEeeCCCCCC------------------c---------eeeEEeec------------CHHHHHHHHhHHHCCCc
Q 020320          232 DNAPIVDITWPPSHP------------------R---------AIYSSLTV------------SGEILEKLRPFIESGKL  272 (327)
Q Consensus       232 ~~g~~v~~g~~~~~~------------------~---------~~~~~~~~------------~~~~~~~~~~l~~~g~~  272 (327)
                      ++|+++.+|......                  .         ........            ..+.++++++++++|++
T Consensus       230 ~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  309 (349)
T 4a27_A          230 PLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKI  309 (349)
T ss_dssp             EEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             cCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCc
Confidence            999999998642100                  0         00111111            15678999999999999


Q ss_pred             eeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCCC
Q 020320          273 KAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPY  310 (327)
Q Consensus       273 ~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~~  310 (327)
                      ++.  ++++|+++++++||+.+.+++..||+|+++++.
T Consensus       310 ~~~--i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~  345 (349)
T 4a27_A          310 KPV--VDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT  345 (349)
T ss_dssp             CCC--EEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred             ccc--ccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence            864  468999999999999999999999999999764

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=2e-48  Score=353.27  Aligned_cols=301  Identities=21%  Similarity=0.224  Sum_probs=256.4

Q ss_pred             CceeEEecccCCCcceEEee--ccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCC-
Q 020320            1 MQNAWYYEEYGPKEVLKLGD--FPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVT-   77 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~--~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~-   77 (327)
                      |||++++++++.+  +++++  +|.|++++|||||||.+++||++|++.+.|.++...+|.++|||++|+|+++|++++ 
T Consensus         6 ~mka~~~~~~~~~--l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~~   83 (360)
T 1piw_A            6 KFEGIAIQSHEDW--KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNS   83 (360)
T ss_dssp             CEEEEEECCSSST--TSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred             heEEEEEecCCCC--eeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCCC
Confidence            6999999988743  88899  999999999999999999999999999988766556899999999999999999999 


Q ss_pred             CCCCCCEEEEe-----c--------ccccccCc------------CCCCCceeeEEEeeccceecCCCCCCHHhhcccch
Q 020320           78 KFNTGDEVYGN-----I--------QDFNAEGK------------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPL  132 (327)
Q Consensus        78 ~~~~Gd~V~~~-----~--------~~~~~~~~------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  132 (327)
                      ++++||||...     +        +.++.|..            ....|+|+||+++++++++++|+++++++|+.++.
T Consensus        84 ~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  163 (360)
T 1piw_A           84 GLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLC  163 (360)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGGT
T ss_pred             CCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhhhhh
Confidence            99999999532     1        12334422            23579999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCC-Chhhhc-
Q 020320          133 AVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKT-KYEDIE-  210 (327)
Q Consensus       133 ~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~-  210 (327)
                      ++.|||+++.++++++|++|||+|+ |++|++++|+||.+ |+++++++++++++++++++|++++++.++. ++.+.. 
T Consensus       164 ~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~  241 (360)
T 1piw_A          164 GGLTVYSPLVRNGCGPGKKVGIVGL-GGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF  241 (360)
T ss_dssp             HHHHHHHHHHHTTCSTTCEEEEECC-SHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC
T ss_pred             hHHHHHHHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh
Confidence            9999999998899999999999996 99999999999999 9998888899999999999999999987765 655544 


Q ss_pred             cCccEEEeCCCC--c---hhhhhhhcCCCcEEEeeCCCCC-Cce----------eeEEeecCHHHHHHHHhHHHCCCcee
Q 020320          211 EKFDVLYDTIGD--C---KNSFVVAKDNAPIVDITWPPSH-PRA----------IYSSLTVSGEILEKLRPFIESGKLKA  274 (327)
Q Consensus       211 ~~~d~v~d~~g~--~---~~~~~~l~~~g~~v~~g~~~~~-~~~----------~~~~~~~~~~~~~~~~~l~~~g~~~~  274 (327)
                      .++|++||++|.  .   ..++.+++++|+++.+|..... ...          +........+.++++++++++|++++
T Consensus       242 ~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~  321 (360)
T 1piw_A          242 DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIKI  321 (360)
T ss_dssp             SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHTTCCC
T ss_pred             cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCCccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCcc
Confidence            589999999986  2   6788999999999999865431 110          11112224678999999999999986


Q ss_pred             eeCCCcccchhh--HHHHHHHHHhCCCCceEEEEeC
Q 020320          275 QIDPTGPYKFKD--VIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       275 ~~~~~~~~~~~~--i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      .  . ++|++++  +++||+.+.+++..+|+|+++.
T Consensus       322 ~--i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~  354 (360)
T 1piw_A          322 W--V-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  354 (360)
T ss_dssp             C--E-EEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             e--E-EEEeccHhHHHHHHHHHHCCCCceEEEEecC
Confidence            5  2 8999999  9999999999888899999884

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=7.5e-48  Score=346.66  Aligned_cols=300  Identities=26%  Similarity=0.336  Sum_probs=255.2

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++++++.+  +++++.|.|++++|||+|||.+++||++|++.+.|.++ ...+|.++|||++|+|+++|+++++++
T Consensus         1 Mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~   78 (339)
T 1rjw_A            1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (339)
T ss_dssp             CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCC--cEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCC
Confidence            899999998843  89999999999999999999999999999999988664 246799999999999999999999999


Q ss_pred             CCCEEEEec-------------ccccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH
Q 020320           81 TGDEVYGNI-------------QDFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK  142 (327)
Q Consensus        81 ~Gd~V~~~~-------------~~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~  142 (327)
                      +||||+...             +..+.|.     +...+|+|+||+++++++++++|+++++++|+.++.++.|||+++.
T Consensus        79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~  158 (339)
T 1rjw_A           79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALK  158 (339)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHH
T ss_pred             CCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            999998632             1223332     2345799999999999999999999999999999999999999998


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc----cCccEEEe
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE----EKFDVLYD  218 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----~~~d~v~d  218 (327)
                      ..++++|++|||+|+ |++|++++++|+.+ |+++++++++++++++++++|++++++..+.++.+..    .++|++||
T Consensus       159 ~~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid  236 (339)
T 1rjw_A          159 VTGAKPGEWVAIYGI-GGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVV  236 (339)
T ss_dssp             HHTCCTTCEEEEECC-STTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred             hcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEE
Confidence            779999999999996 88999999999998 8998888899999999999999999987766554432    58999999


Q ss_pred             CCCCc---hhhhhhhcCCCcEEEeeCCCCC-----------CceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccch
Q 020320          219 TIGDC---KNSFVVAKDNAPIVDITWPPSH-----------PRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKF  284 (327)
Q Consensus       219 ~~g~~---~~~~~~l~~~g~~v~~g~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~  284 (327)
                      ++|..   ..++.+++++|+++.+|.....           ...+........+.++++++++++|++++.   +++|++
T Consensus       237 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~---~~~~~l  313 (339)
T 1rjw_A          237 TAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTI---IEVQPL  313 (339)
T ss_dssp             SSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCC---EEEEEG
T ss_pred             CCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCcc---EEEEcH
Confidence            99963   6788999999999999865421           011111222346789999999999999874   578999


Q ss_pred             hhHHHHHHHHHhCCCCceEEEEeC
Q 020320          285 KDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       285 ~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      +++++||+.+.+++..+|+|+++.
T Consensus       314 ~~~~~A~~~~~~~~~~gKvvi~~~  337 (339)
T 1rjw_A          314 EKINEVFDRMLKGQINGRVVLTLE  337 (339)
T ss_dssp             GGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHcCCCceEEEEecC
Confidence            999999999998888899999874

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1.8e-48  Score=352.47  Aligned_cols=301  Identities=21%  Similarity=0.274  Sum_probs=253.8

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHh-hhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSK-RRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~-~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||+++++++++   ++++++|.|++++|||+|||.+++||++|++ .+.|.++ ..+|.++|||++|+|+++|+++++++
T Consensus         1 MkA~~~~~~~~---~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~   76 (352)
T 3fpc_A            1 MKGFAMLSIGK---VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFK   76 (352)
T ss_dssp             CEEEEEEETTE---EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCC---ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCC
Confidence            99999999987   8999999999999999999999999999999 5577654 46799999999999999999999999


Q ss_pred             CCCEEEEeccc------------ccccC--------cCCCCCceeeEEEeecc--ceecCCCCCCHHhhcccchHHHHHH
Q 020320           81 TGDEVYGNIQD------------FNAEG--------KLKQLGALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAI  138 (327)
Q Consensus        81 ~Gd~V~~~~~~------------~~~~~--------~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~  138 (327)
                      +||||++....            .+.|.        +...+|+|+||+++++.  .++++|+++++++|++++.++.|||
T Consensus        77 vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~  156 (352)
T 3fpc_A           77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGF  156 (352)
T ss_dssp             TTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHH
T ss_pred             CCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHH
Confidence            99999964311            11111        12357999999999975  9999999999999999999999999


Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------c
Q 020320          139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------E  211 (327)
Q Consensus       139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~  211 (327)
                      ++++.+++++|++|||+| +|++|++++|+|+.+ |+ ++++++.+++|+++++++|+++++++++.++.+.+      +
T Consensus       157 ~al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~  234 (352)
T 3fpc_A          157 HGAELANIKLGDTVCVIG-IGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGK  234 (352)
T ss_dssp             HHHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTC
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCC
Confidence            999999999999999999 699999999999998 88 78888888999999999999999988777766543      3


Q ss_pred             CccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCCc---------------eeeEEee-cCHHHHHHHHhHHHCCCc
Q 020320          212 KFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHPR---------------AIYSSLT-VSGEILEKLRPFIESGKL  272 (327)
Q Consensus       212 ~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~---------------~~~~~~~-~~~~~~~~~~~l~~~g~~  272 (327)
                      ++|++||++|.   ...++.+++++|+++.+|.......               .+..... ...+.++++++++++|++
T Consensus       235 g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i  314 (352)
T 3fpc_A          235 GVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRV  314 (352)
T ss_dssp             CEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHcCCC
Confidence            79999999986   3788999999999999986542110               0111111 125679999999999999


Q ss_pred             eeeeCCCcccc-hhhHHHHHHHHHhCCCC-ceEEEEeC
Q 020320          273 KAQIDPTGPYK-FKDVIEAFRYLETGRAR-GKVVISAF  308 (327)
Q Consensus       273 ~~~~~~~~~~~-~~~i~~a~~~~~~~~~~-gk~vv~~~  308 (327)
                      ++.++++++|+ ++++++||+.+.+++.. +|+|+++.
T Consensus       315 ~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          315 DPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             CGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             ChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            98766789999 99999999999886654 89999873

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=6.5e-48  Score=348.26  Aligned_cols=299  Identities=19%  Similarity=0.278  Sum_probs=251.1

Q ss_pred             ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||+++++.+|.   ++++|.|.|++ ++|||||||.+++||++|++.+.+.. ...+|.++|||++|+|+++|++|++++
T Consensus         1 MkAvv~~~~g~---l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~-~~~~P~i~G~E~~G~V~~vG~~V~~~~   76 (346)
T 4a2c_A            1 MKSVVNDTDGI---VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNG-AHYYPITLGHEFSGYIDAVGSGVDDLH   76 (346)
T ss_dssp             CEEEEECSSSC---EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSC-SSSSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CCEEEEecCCC---EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCC-CCCCCccccEEEEEEEEEECCCccccc
Confidence            99999999987   99999999985 79999999999999999999888764 356899999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320           81 TGDEVYGNIQ------------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT  143 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~  143 (327)
                      +||+|.+...            .++.|.     +...+|+|+||+++|+++++++|+++++++|+++. .+.++++++..
T Consensus        77 ~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~~~~~  155 (346)
T 4a2c_A           77 PGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLHAFHL  155 (346)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHHHHHH
T ss_pred             CCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHHHHHH
Confidence            9999986532            123332     34567999999999999999999999999999764 34567777788


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcE-EEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEE
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH-VVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVL  216 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~-v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v  216 (327)
                      .++++|++|+|+| +|++|++++|+||++ |+++ ++++.+++|+++++++|+++++++++.+..+..      +++|++
T Consensus       156 ~~~~~g~~VlV~G-aG~vG~~aiq~ak~~-G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v  233 (346)
T 4a2c_A          156 AQGCENKNVIIIG-AGTIGLLAIQCAVAL-GAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLI  233 (346)
T ss_dssp             TTCCTTSEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEE
T ss_pred             hccCCCCEEEEEC-CCCcchHHHHHHHHc-CCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccc
Confidence            9999999999998 699999999999999 7765 556688999999999999999999887765532      579999


Q ss_pred             EeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCc--------------eeeEEe-----ecCHHHHHHHHhHHHCCCcee
Q 020320          217 YDTIGDC---KNSFVVAKDNAPIVDITWPPSHPR--------------AIYSSL-----TVSGEILEKLRPFIESGKLKA  274 (327)
Q Consensus       217 ~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~--------------~~~~~~-----~~~~~~~~~~~~l~~~g~~~~  274 (327)
                      +|++|..   ..++.+++++|+++.+|.......              .+..++     ....+.++++++++++|++++
T Consensus       234 ~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~  313 (346)
T 4a2c_A          234 LETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSL  313 (346)
T ss_dssp             EECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCC
T ss_pred             cccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCC
Confidence            9999954   678899999999999986543211              111111     122478999999999999987


Q ss_pred             eeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          275 QIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       275 ~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      .++++++|+|+++++||+.+.+++..||+|+.+
T Consensus       314 ~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          314 EPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             GGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             CccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            666789999999999999999999999999864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=3.7e-48  Score=349.07  Aligned_cols=296  Identities=32%  Similarity=0.491  Sum_probs=251.4

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC--CCCCCCcccccccEEEEEeCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF--PSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      |||++++.+++.+  +++.+.|.|++++|||||||.+++||++|++.+.+..+  ...+|.++|||++|+|+++|+++++
T Consensus         7 ~mka~~~~~~~~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~   84 (343)
T 3gaz_A            7 TMIAAVVEEANGP--FVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDS   84 (343)
T ss_dssp             EEEEEEECSTTCC--EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             hheEEEEecCCCc--eEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCC
Confidence            5999999998876  99999999999999999999999999999999988652  2568999999999999999999999


Q ss_pred             CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcC
Q 020320           79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGG  157 (327)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga  157 (327)
                      +++||||+++..+.     ...+|+|+||++++++.++++|+++++++|++++.++.|||+++ +.+++++|++|||+||
T Consensus        85 ~~vGdrV~~~~~g~-----~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  159 (343)
T 3gaz_A           85 FRVGDAVFGLTGGV-----GGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGG  159 (343)
T ss_dssp             CCTTCEEEEECCSS-----TTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETT
T ss_pred             CCCCCEEEEEeCCC-----CCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecC
Confidence            99999999875321     12479999999999999999999999999999999999999999 6899999999999999


Q ss_pred             CchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhh
Q 020320          158 AGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVV  229 (327)
Q Consensus       158 ~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~  229 (327)
                      +|++|++++++|+.+ |++++++ .+++++++++++|++. ++ ...++.+..      +++|++||++|..  ..++.+
T Consensus       160 ~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~  235 (343)
T 3gaz_A          160 GGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSA  235 (343)
T ss_dssp             TSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcHHHHHHHHH
Confidence            999999999999998 9988887 8889999999999998 77 555554432      4799999999953  778899


Q ss_pred             hcCCCcEEEeeCCCCCCc--------eeeEEeec-----------CHHHHHHHHhHHHCCCceeeeCCC-cccchhhHHH
Q 020320          230 AKDNAPIVDITWPPSHPR--------AIYSSLTV-----------SGEILEKLRPFIESGKLKAQIDPT-GPYKFKDVIE  289 (327)
Q Consensus       230 l~~~g~~v~~g~~~~~~~--------~~~~~~~~-----------~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~~~i~~  289 (327)
                      ++++|+++.+|.....+.        .+......           ..+.++++++++++|++++.  ++ ++|+++++++
T Consensus       236 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~~l~~~~~  313 (343)
T 3gaz_A          236 VKRFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPR--LDPRTFSIAEIGS  313 (343)
T ss_dssp             EEEEEEEEESCCCSCCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCC--BCSCCEETTCHHH
T ss_pred             HhcCCeEEEEcccCccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccC--ccCcEecHHHHHH
Confidence            999999999986542211        11111111           12678999999999999864  35 7999999999


Q ss_pred             HHHHHHhCCC----CceEEEEeCC
Q 020320          290 AFRYLETGRA----RGKVVISAFP  309 (327)
Q Consensus       290 a~~~~~~~~~----~gk~vv~~~~  309 (327)
                      ||+.+.+++.    .||+++++..
T Consensus       314 A~~~~~~~~~~Gr~~GK~v~~~~~  337 (343)
T 3gaz_A          314 AYDAVLGRNDVPRQRGKIAITVEG  337 (343)
T ss_dssp             HHHHHHTCTTCCCCSSBCEEECC-
T ss_pred             HHHHHHcCCCcccccceEEEEecc
Confidence            9999988875    5789998754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-47  Score=348.97  Aligned_cols=302  Identities=23%  Similarity=0.263  Sum_probs=252.9

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      +||++++..+++  .++++++|.|++++|||||||.+++||++|++.+.|.++...+|.++|||++|+|+++|++|++++
T Consensus        22 ~~~a~~~~~~~~--~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~   99 (369)
T 1uuf_A           22 KIKAVGAYSAKQ--PLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYA   99 (369)
T ss_dssp             -CEEEEBSSTTS--CCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             eEEEEEEcCCCC--CcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCCC
Confidence            588998876543  499999999999999999999999999999999988765556899999999999999999999999


Q ss_pred             CCCEEEEec-------------ccccccCc-------------CCCCCceeeEEEeeccceecCCCC-CCHHhhcccchH
Q 020320           81 TGDEVYGNI-------------QDFNAEGK-------------LKQLGALAEFIVVEESLIAKKPKN-ISFEEAASLPLA  133 (327)
Q Consensus        81 ~Gd~V~~~~-------------~~~~~~~~-------------~~~~g~~~~~~~v~~~~~~~~p~~-~~~~~aa~~~~~  133 (327)
                      +||||++.+             +..+.|..             ....|+|+||++++++.++++|++ +++++|+.++.+
T Consensus       100 vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~  179 (369)
T 1uuf_A          100 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA  179 (369)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTH
T ss_pred             CCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhh
Confidence            999998632             12334431             135699999999999999999999 999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-cC
Q 020320          134 VQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-EK  212 (327)
Q Consensus       134 ~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-~~  212 (327)
                      +.|||+++...++++|++|||+| +|++|++++|+|+.+ |+++++++++++++++++++|++++++..+.++.... .+
T Consensus       180 ~~tA~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g  257 (369)
T 1uuf_A          180 GITTYSPLRHWQAGPGKKVGVVG-IGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKS  257 (369)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTC
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcC
Confidence            99999999888999999999999 599999999999998 9998888899999999999999999987665433322 58


Q ss_pred             ccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC------------ceeeEEeecCHHHHHHHHhHHHCCCceeeeC
Q 020320          213 FDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP------------RAIYSSLTVSGEILEKLRPFIESGKLKAQID  277 (327)
Q Consensus       213 ~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  277 (327)
                      +|++||++|.   ...++.+++++|+++.+|......            ..+........+.++++++++++|++++.  
T Consensus       258 ~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~--  335 (369)
T 1uuf_A          258 FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVAD--  335 (369)
T ss_dssp             EEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCCCC--
T ss_pred             CCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCCcc--
Confidence            9999999984   367889999999999998653211            01111222346789999999999999875  


Q ss_pred             CCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320          278 PTGPYKFKDVIEAFRYLETGRARGKVVISAFP  309 (327)
Q Consensus       278 ~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~  309 (327)
                       ++.|+++++++||+.+.+++..+|+|+.+.+
T Consensus       336 -i~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          336 -IEMIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             -EEEECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             -eEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence             3579999999999999988888999999854

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.5e-47  Score=347.31  Aligned_cols=298  Identities=22%  Similarity=0.279  Sum_probs=248.1

Q ss_pred             CceeEEecccCCCcceEEeeccCCC-CCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPT-PQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSV   76 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~-~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v   76 (327)
                      |||++++++++..  ++++++|.|+ +++|||||||.+++||++|++.+.|.++   ...+|.++|||++|+|+++|+++
T Consensus        15 ~mka~~~~~~g~~--l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   92 (359)
T 1h2b_A           15 RLKAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGV   92 (359)
T ss_dssp             --CEEEESSTTSC--CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTC
T ss_pred             hceEEEEecCCCC--cEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCC
Confidence            6999999998743  8999999999 9999999999999999999999988764   34689999999999999999999


Q ss_pred             CCCCCCCEEEEecc------------cccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhc---ccchHHHH
Q 020320           77 TKFNTGDEVYGNIQ------------DFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAA---SLPLAVQT  136 (327)
Q Consensus        77 ~~~~~Gd~V~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa---~~~~~~~t  136 (327)
                      +++++||||+++..            ..+.|..     ....|+|+||++++++.++++|+++++++|+   .+++++.|
T Consensus        93 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~t  172 (359)
T 1h2b_A           93 EGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGIT  172 (359)
T ss_dssp             CSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHH
T ss_pred             CCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHHH
Confidence            99999999986531            2233321     2357999999999999999999999999998   67888899


Q ss_pred             HHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc----
Q 020320          137 AIEGFKT--AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE----  210 (327)
Q Consensus       137 a~~~l~~--~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----  210 (327)
                      ||+++..  .++++|++|||+|+ |++|++++|+||+++|+++++++++++++++++++|+++++++++. +.+..    
T Consensus       173 a~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~v~~~~  250 (359)
T 1h2b_A          173 AYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-PVKQVMELT  250 (359)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-HHHHHHHHT
T ss_pred             HHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-HHHHHHHHh
Confidence            9999987  89999999999996 9999999999998746788888899999999999999999998766 44322    


Q ss_pred             --cCccEEEeCCCCc-----hhhhhhhcCCCcEEEeeCCCCCCc----------eeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          211 --EKFDVLYDTIGDC-----KNSFVVAKDNAPIVDITWPPSHPR----------AIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       211 --~~~d~v~d~~g~~-----~~~~~~l~~~g~~v~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                        +++|++||++|..     ..++.+  ++|+++.+|.......          .+........+.++++++++++|+++
T Consensus       251 ~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~  328 (359)
T 1h2b_A          251 RGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGKVR  328 (359)
T ss_dssp             TTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCC
T ss_pred             CCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCCCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCc
Confidence              2799999999854     345555  9999999986542111          11122223468899999999999998


Q ss_pred             eeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          274 AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       274 ~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +.  + ++|+++++++||+.+.+++..+|+|+.+
T Consensus       329 ~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          329 VE--V-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             CC--E-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             ce--E-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            64  3 8999999999999999888889999874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1.8e-47  Score=348.92  Aligned_cols=301  Identities=22%  Similarity=0.264  Sum_probs=249.7

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++.+++.+  ++++++|.|++++|||||||.+++||++|++.+.|. +...+|.++|||++|+|+++|++|++++
T Consensus         8 ~mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~~~~   84 (376)
T 1e3i_A            8 KCKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVTNFK   84 (376)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             heeEEEEecCCCC--eEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCccCC
Confidence            5999999988753  899999999999999999999999999999998886 4456899999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcCC------------------------------CCCceeeEEEeeccceecC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKLK------------------------------QLGALAEFIVVEESLIAKK  118 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~~------------------------------~~g~~~~~~~v~~~~~~~~  118 (327)
                      +||||++...            ..+.|....                              ..|+|+||++++++.++++
T Consensus        85 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  164 (376)
T 1e3i_A           85 PGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARV  164 (376)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccEEEC
Confidence            9999987531            233332211                              2489999999999999999


Q ss_pred             CCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCC
Q 020320          119 PKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGAD  196 (327)
Q Consensus       119 p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~  196 (327)
                      |+++++++|++++.++.|||+++ +.+++++|++|||+| +|++|++++|+||.+ |+ ++++++++++++++++++|++
T Consensus       165 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~  242 (376)
T 1e3i_A          165 DDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKALGAT  242 (376)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCS
T ss_pred             CCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCc
Confidence            99999999999999999999998 568999999999999 699999999999998 88 677777899999999999999


Q ss_pred             EEEeCCC--CChhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCCC----------ceeeEEeec
Q 020320          197 KVIDYRK--TKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSHP----------RAIYSSLTV  255 (327)
Q Consensus       197 ~v~~~~~--~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~~----------~~~~~~~~~  255 (327)
                      ++++.++  .++.+.+     .++|++||++|..   ..++.+++++ |+++.+|......          ..+......
T Consensus       243 ~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~i~g~~~~  322 (376)
T 1e3i_A          243 DCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFG  322 (376)
T ss_dssp             EEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTCEEEECSGG
T ss_pred             EEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccCeEEEEecC
Confidence            9998764  3444432     3799999999863   6788999999 9999998632100          011111111


Q ss_pred             ---CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          256 ---SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       256 ---~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                         ..+.++++++++++|++++.++++++|+++++++||+.+.+++ .+|+++.+
T Consensus       323 ~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          323 GWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             GCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             CCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEEeC
Confidence               2467999999999999987556678999999999999998776 46998864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4e-47  Score=343.05  Aligned_cols=302  Identities=21%  Similarity=0.290  Sum_probs=255.1

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||++++++++.+  ++++++|.|.+++|||+|||.+++||++|++.+.|.++ ...+|.++|||++|+|+++|++++++
T Consensus         5 ~mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~   82 (347)
T 2hcy_A            5 TQKGVIFYESHGK--LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGW   82 (347)
T ss_dssp             EEEEEEESSTTCC--CEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCSC
T ss_pred             ccEEEEEeCCCCC--CEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCCC
Confidence            5999999998843  99999999999999999999999999999999988664 24679999999999999999999999


Q ss_pred             CCCCEEEEe-----ccc--------ccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320           80 NTGDEVYGN-----IQD--------FNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF  141 (327)
Q Consensus        80 ~~Gd~V~~~-----~~~--------~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  141 (327)
                      ++||||++.     ++.        .+.|.     +...+|+|+||++++++.++++|+++++++|+.++.++.|||+++
T Consensus        83 ~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l  162 (347)
T 2hcy_A           83 KIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL  162 (347)
T ss_dssp             CTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHH
T ss_pred             cCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHH
Confidence            999999863     221        22232     224579999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCC-CCChhhhc-----cCccE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYR-KTKYEDIE-----EKFDV  215 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~-~~~~~~~~-----~~~d~  215 (327)
                      .+.++++|++|||+|++|++|++++++++.. |++++++++++++.+.++++|++++++.. ..++.+..     .++|+
T Consensus       163 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~  241 (347)
T 2hcy_A          163 KSANLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHG  241 (347)
T ss_dssp             HTTTCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEE
T ss_pred             HhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCE
Confidence            8889999999999998899999999999998 89999888899999999999999988866 34544432     27999


Q ss_pred             EEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCc------------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCc
Q 020320          216 LYDTIGDC---KNSFVVAKDNAPIVDITWPPSHPR------------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTG  280 (327)
Q Consensus       216 v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~  280 (327)
                      +||++|..   ..++.+++++|+++.+|.....+.            .+........+.++++++++++|++++.   ++
T Consensus       242 vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~---~~  318 (347)
T 2hcy_A          242 VINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSP---IK  318 (347)
T ss_dssp             EEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTSCCCC---EE
T ss_pred             EEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCCCccc---eE
Confidence            99999863   677899999999999987542211            1111222346789999999999999874   47


Q ss_pred             ccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          281 PYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       281 ~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      +|+++++++||+.+.+++..+|+|+++.
T Consensus       319 ~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          319 VVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             EEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             EEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            8999999999999998888899999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1e-47  Score=346.47  Aligned_cols=303  Identities=32%  Similarity=0.436  Sum_probs=256.8

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++++++.++.++++++|.|.+++|||||||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++++
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            89999999987777999999999999999999999999999999999887643 36799999999999999999999999


Q ss_pred             CCCEEEEec------------ccccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320           81 TGDEVYGNI------------QDFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT  143 (327)
Q Consensus        81 ~Gd~V~~~~------------~~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~  143 (327)
                      +||||+...            +.++.|..     ....|+|+||++++++.++++|+++++++|+.++.++.|||+++..
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~  160 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVD  160 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTT
T ss_pred             CCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHH
Confidence            999998532            12333321     3347999999999999999999999999999999999999999976


Q ss_pred             -cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEE
Q 020320          144 -AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVL  216 (327)
Q Consensus       144 -~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v  216 (327)
                       +++++|++|||+|++|++|++++++++.+ |++++++++++++.+.++++|++++++..+.++.+.+      .++|++
T Consensus       161 ~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~v  239 (343)
T 2eih_A          161 KLGVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKV  239 (343)
T ss_dssp             TSCCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEE
T ss_pred             hcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEE
Confidence             69999999999998899999999999998 8999999999999999999999999887766554432      379999


Q ss_pred             EeCCCC--chhhhhhhcCCCcEEEeeCCCCCC--c----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCccc
Q 020320          217 YDTIGD--CKNSFVVAKDNAPIVDITWPPSHP--R----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPY  282 (327)
Q Consensus       217 ~d~~g~--~~~~~~~l~~~g~~v~~g~~~~~~--~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~  282 (327)
                      ||++|.  ...++.+++++|+++.+|......  .          .+........+.++++++++++|++++.  ++++|
T Consensus       240 i~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~  317 (343)
T 2eih_A          240 VDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPV--VGQVL  317 (343)
T ss_dssp             EESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSCCC--EEEEE
T ss_pred             EECCCHHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCCCc--eeEEe
Confidence            999983  267889999999999998643211  0          1111122346789999999999999864  37899


Q ss_pred             chhhHHHHHHHHHhCCCCceEEEEe
Q 020320          283 KFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       283 ~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +++++++||+.+.+++..+|+|+.+
T Consensus       318 ~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          318 PLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             EGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEec
Confidence            9999999999999888889999976

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=1.8e-48  Score=354.45  Aligned_cols=302  Identities=22%  Similarity=0.325  Sum_probs=252.3

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||+++++.++.   ++++++|.|++++|||+|||.+++||++|++.+.|.+ ...+|.++|||++|+|+++|+++++++
T Consensus        23 ~mkA~v~~~~~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~~G~V~~vG~~v~~~~   98 (370)
T 4ej6_A           23 MMKAVRLESVGN---ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCGIVVEAGSAVRDIA   98 (370)
T ss_dssp             EEEEEEEEETTE---EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSEEEEEEEECTTCCSSC
T ss_pred             heEEEEEecCCc---eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcceEEEEEEECCCCCCCC
Confidence            599999998875   9999999999999999999999999999999998876 456799999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320           81 TGDEVYGNIQ------------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT  143 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~  143 (327)
                      +||||++...            .++.|.     +...+|+|+||++++++.++++|+++++++|+ ++.++.++|++++.
T Consensus        99 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l~~  177 (370)
T 4ej6_A           99 PGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGVDL  177 (370)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHHHHh
Confidence            9999987431            223332     23467999999999999999999999999998 66688899999988


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc--------cCcc
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE--------EKFD  214 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~--------~~~d  214 (327)
                      +++++|++|||+| +|++|++++|+|+++ |+ ++++++.++++.++++++|++++++++..++.+.+        +++|
T Consensus       178 ~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~D  255 (370)
T 4ej6_A          178 SGIKAGSTVAILG-GGVIGLLTVQLARLA-GATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVD  255 (370)
T ss_dssp             HTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred             cCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCC
Confidence            9999999999999 499999999999998 88 67777789999999999999999998877765532        2699


Q ss_pred             EEEeCCCC---chhhhhhhcCCCcEEEeeCCCCC-C--c----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCC
Q 020320          215 VLYDTIGD---CKNSFVVAKDNAPIVDITWPPSH-P--R----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDP  278 (327)
Q Consensus       215 ~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~-~--~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~  278 (327)
                      ++||++|.   ...++.+++++|+++.+|..... +  .          .+.. .......++++++++++|++++.+++
T Consensus       256 vvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~l~~~g~i~~~~~i  334 (370)
T 4ej6_A          256 VVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLG-SFINPFVHRRAADLVATGAIEIDRMI  334 (370)
T ss_dssp             EEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEE-CCSCTTCHHHHHHHHHTTCSCCGGGE
T ss_pred             EEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEE-eccChHHHHHHHHHHHcCCCChhHcE
Confidence            99999995   37888999999999999865421 1  1          1111 12234568999999999999876667


Q ss_pred             CcccchhhHHHHHHHHHhCC-CCceEEEEeCCC
Q 020320          279 TGPYKFKDVIEAFRYLETGR-ARGKVVISAFPY  310 (327)
Q Consensus       279 ~~~~~~~~i~~a~~~~~~~~-~~gk~vv~~~~~  310 (327)
                      +++|+++++++||+.+.+++ ..+|+++++.+.
T Consensus       335 ~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~i  367 (370)
T 4ej6_A          335 SRRISLDEAPDVISNPAAAGEVKVLVIPSAERV  367 (370)
T ss_dssp             EEEECGGGHHHHHHSCCCTTCSEEEECCC----
T ss_pred             EEEEEHHHHHHHHHHHHcCCCCeEEEEEccccc
Confidence            89999999999999997776 447888877543

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2e-47  Score=342.34  Aligned_cols=295  Identities=27%  Similarity=0.360  Sum_probs=252.2

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||+++++++|.++.+++++.|.|.+++|||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++++
T Consensus         1 ~Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (327)
T 1qor_A            1 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIK   80 (327)
T ss_dssp             -CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CcEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence            69999999998777899999999999999999999999999999999988765556899999999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g  159 (327)
                      +|||| ++.+        ...|+|+||++++++.++++|+++++++|+.++.++.|||+++. .+++++|++|+|+||+|
T Consensus        81 ~GdrV-~~~g--------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~g  151 (327)
T 1qor_A           81 AGDRV-VYAQ--------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAG  151 (327)
T ss_dssp             TTCEE-EESC--------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTB
T ss_pred             CCCEE-EECC--------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCC
Confidence            99999 4431        13599999999999999999999999999999999999999996 78999999999999999


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK  231 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~  231 (327)
                      ++|++++++++.. |++++++++++++.+.++++|++++++..+.++.+..      .++|++||++|..  ..++.+++
T Consensus       152 giG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~  230 (327)
T 1qor_A          152 GVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQ  230 (327)
T ss_dssp             HHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEE
T ss_pred             HHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhc
Confidence            9999999999999 8999999999999999999999999987776654432      3699999999932  67889999


Q ss_pred             CCCcEEEeeCCCCCC--c---------eeeEE-eec---------CHHHHHHHHhHHHCCCceeeeCCC--cccchhhHH
Q 020320          232 DNAPIVDITWPPSHP--R---------AIYSS-LTV---------SGEILEKLRPFIESGKLKAQIDPT--GPYKFKDVI  288 (327)
Q Consensus       232 ~~g~~v~~g~~~~~~--~---------~~~~~-~~~---------~~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~i~  288 (327)
                      ++|+++.+|......  .         .+... ...         ..+.++++++++++|++++.  ++  ++|++++++
T Consensus       231 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~~~l~~~~  308 (327)
T 1qor_A          231 RRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVD--VAEQQKYPLKDAQ  308 (327)
T ss_dssp             EEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCC--CCGGGEEEGGGHH
T ss_pred             CCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccc--cccCcEEcHHHHH
Confidence            999999998643211  0         01111 000         13557899999999999864  57  899999999


Q ss_pred             HHHHHHHhCCCCceEEEEe
Q 020320          289 EAFRYLETGRARGKVVISA  307 (327)
Q Consensus       289 ~a~~~~~~~~~~gk~vv~~  307 (327)
                      +||+.+.+++..+|+++.+
T Consensus       309 ~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          309 RAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHHhCCCCceEEEeC
Confidence            9999999888889999864

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=7.1e-47  Score=344.14  Aligned_cols=303  Identities=25%  Similarity=0.359  Sum_probs=246.5

Q ss_pred             CceeEEecccCCCcceEEe-eccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLG-DFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~-~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||+++++++++   ++++ +.|.|++++|||||||.+++||++|++.+.+.   ..+|.++|||++|+|+++|++++++
T Consensus        11 ~mkA~v~~~~~~---l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG~~v~~~   84 (371)
T 3gqv_A           11 QQTALTVNDHDE---VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVGSDVTHI   84 (371)
T ss_dssp             CEEEEEECTTSC---EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEECTTCCSC
T ss_pred             hceeEEEcCCCc---eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeCCCCCCC
Confidence            699999999876   9999 99999999999999999999999999988663   3468999999999999999999999


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-h-cCC-----------
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-T-AGF-----------  146 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~-~~~-----------  146 (327)
                      ++||||++.+..  .|.+...+|+|+||++++++.++++|+++++++|+++++++.|||+++. . .++           
T Consensus        85 ~~GdrV~~~~~~--~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~  162 (371)
T 3gqv_A           85 QVGDRVYGAQNE--MCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTH  162 (371)
T ss_dssp             CTTCEEEEECCT--TCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCC
T ss_pred             CCCCEEEEeccC--CCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCcccccccc
Confidence            999999987532  2233446799999999999999999999999999999999999999994 5 443           


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIG  221 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g  221 (327)
                      ++|++|||+|++|++|++++|+|+.+ |+++++++ +++|+++++++|+++++++++.++.+.+     .++|++||++|
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g  240 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCIT  240 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSC
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCC
Confidence            89999999998899999999999998 99888775 7899999999999999999887776543     35999999999


Q ss_pred             Cc---hhhhhhh-cCCCcEEEeeCCCCC---CceeeE-----------Eee--------cCH-------HHHHHHHhHHH
Q 020320          222 DC---KNSFVVA-KDNAPIVDITWPPSH---PRAIYS-----------SLT--------VSG-------EILEKLRPFIE  268 (327)
Q Consensus       222 ~~---~~~~~~l-~~~g~~v~~g~~~~~---~~~~~~-----------~~~--------~~~-------~~~~~~~~l~~  268 (327)
                      ..   ..++.++ +++|+++.+|.....   ......           ...        ...       +.+++++++++
T Consensus       241 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~  320 (371)
T 3gqv_A          241 NVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVE  320 (371)
T ss_dssp             SHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            63   6778888 599999999854321   100100           011        111       23468889999


Q ss_pred             CCCceeeeCCCcccchhhHHHHHHHHHhCCCCc-eEEEEeCCCCCc
Q 020320          269 SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARG-KVVISAFPYTES  313 (327)
Q Consensus       269 ~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~g-k~vv~~~~~~~~  313 (327)
                      +|++++.+..++.|+++++++||+.+.+++..| |+|+.+.+..+.
T Consensus       321 ~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~~~~~  366 (371)
T 3gqv_A          321 DGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEGPLEH  366 (371)
T ss_dssp             TTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECCC---
T ss_pred             CCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCCcccc
Confidence            999998766677799999999999999998886 667777665543

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=3.2e-47  Score=347.02  Aligned_cols=302  Identities=23%  Similarity=0.256  Sum_probs=251.2

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++..++++  ++++++|.|+++++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++|++++
T Consensus         6 ~mkA~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~   83 (373)
T 2fzw_A            6 KCKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLK   83 (373)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEecCCCC--cEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCCCC
Confidence            6999999988753  89999999999999999999999999999999988765556899999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCc--------C------------------CCCCceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGK--------L------------------KQLGALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~--------~------------------~~~g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||||++...            ..+.|..        .                  ...|+|+||++++++.++++|+++
T Consensus        84 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  163 (373)
T 2fzw_A           84 AGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLA  163 (373)
T ss_dssp             TTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCCCC
Confidence            9999987531            2233321        0                  125899999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      ++++|++++.++.|||+++ +..++++|++|||+| +|++|++++|+|+.+ |+ ++++++++++++++++++|++++++
T Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~  241 (373)
T 2fzw_A          164 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATECIN  241 (373)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             CHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence            9999999999999999998 468999999999999 699999999999999 88 6777778999999999999999998


Q ss_pred             CCC--CChhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCC-Cc-----------eeeEEeec--
Q 020320          201 YRK--TKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSH-PR-----------AIYSSLTV--  255 (327)
Q Consensus       201 ~~~--~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~-~~-----------~~~~~~~~--  255 (327)
                      .++  .++.+.+     .++|++||++|..   ..++.+++++ |+++.+|..... +.           .+......  
T Consensus       242 ~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  321 (373)
T 2fzw_A          242 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGW  321 (373)
T ss_dssp             GGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             cccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCCEEEEeccCCC
Confidence            764  3444332     3799999999863   6788999999 999999865421 10           11111111  


Q ss_pred             -CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          256 -SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       256 -~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                       ..+.++++++++++|++++.++++++|+++++++||+.+.+++. .|+++.+
T Consensus       322 ~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          322 KSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             CHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             CcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence             24679999999999999865556789999999999999988775 6998864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=8.8e-48  Score=345.51  Aligned_cols=296  Identities=22%  Similarity=0.334  Sum_probs=249.3

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC-CC--CCCCCcccccccEEEEEeCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FP--SDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~-~~--~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      +||+++++++|.++.+++.+.|.|.+++|||+|||.+++||++|++.+.|.+ +.  ..+|.++|||++|+|+++|++++
T Consensus         1 ~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~   80 (333)
T 1wly_A            1 MVMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT   80 (333)
T ss_dssp             -CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred             CcEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence            6999999999877779999999999999999999999999999999998865 22  45799999999999999999999


Q ss_pred             CCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHh--hcccchHHHHHHHHHH-hcCCCCCCEEEE
Q 020320           78 KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEE--AASLPLAVQTAIEGFK-TAGFKTGQTIFI  154 (327)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~--aa~~~~~~~ta~~~l~-~~~~~~~~~vlI  154 (327)
                      ++++||||+....         ..|+|+||++++++.++++|+++++++  |+.++.++.|||+++. .+++++|++|+|
T Consensus        81 ~~~~GdrV~~~~~---------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV  151 (333)
T 1wly_A           81 DFTVGERVCTCLP---------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLI  151 (333)
T ss_dssp             SCCTTCEEEECSS---------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE
T ss_pred             CCCCCCEEEEecC---------CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEE
Confidence            9999999977531         269999999999999999999999999  8889999999999996 689999999999


Q ss_pred             EcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCC--chhh
Q 020320          155 VGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGD--CKNS  226 (327)
Q Consensus       155 ~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~--~~~~  226 (327)
                      +|++|++|++++++++.. |++++++++++++.+.++++|++++++..+.++.+..      .++|++||++|.  ...+
T Consensus       152 ~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~  230 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKS  230 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTTTHHHH
T ss_pred             ECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHHHHHHH
Confidence            999999999999999998 8999999999989999999999999887766654432      379999999985  3778


Q ss_pred             hhhhcCCCcEEEeeCCCCC----Cce---------eeEE-e--ec--C----HHHHHHHHhHHHCCCceeeeCCCcccch
Q 020320          227 FVVAKDNAPIVDITWPPSH----PRA---------IYSS-L--TV--S----GEILEKLRPFIESGKLKAQIDPTGPYKF  284 (327)
Q Consensus       227 ~~~l~~~g~~v~~g~~~~~----~~~---------~~~~-~--~~--~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~  284 (327)
                      +.+++++|+++.+|.....    +..         .... .  .+  .    .+.++++++++++|++++.  ++++|++
T Consensus       231 ~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l  308 (333)
T 1wly_A          231 LDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSS--VAKTFPL  308 (333)
T ss_dssp             HHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCC--EEEEEEG
T ss_pred             HHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCC--cceEEeH
Confidence            8999999999999854311    100         1110 0  01  2    2468999999999999864  4789999


Q ss_pred             hhHHHHHHHHHhCCCCceEEEEeC
Q 020320          285 KDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       285 ~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      +++++||+.+.+++..+|+|+.++
T Consensus       309 ~~~~~A~~~~~~~~~~gKvvi~~~  332 (333)
T 1wly_A          309 REAAAAHKYMGGRQTIGSIVLLPQ  332 (333)
T ss_dssp             GGHHHHHHHHHHCSCCSEEEEETT
T ss_pred             HHHHHHHHHHHcCCCceEEEEEeC
Confidence            999999999999888899999874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.9e-47  Score=343.76  Aligned_cols=301  Identities=23%  Similarity=0.297  Sum_probs=248.4

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcC-CCC--CCCCCCcccccccEEEEEeCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQR-PLF--PSDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~-~~~--~~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      |||++++++++.   +++++.|.|++++|||||||.+++||++|++.+.+ .++  ...+|.++|||++|+|+++|++++
T Consensus         4 ~mka~~~~~~~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   80 (352)
T 1e3j_A            4 DNLSAVLYKQND---LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK   80 (352)
T ss_dssp             CCEEEEEEETTE---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred             cCEEEEEEcCCc---EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCC
Confidence            599999998764   99999999999999999999999999999998773 322  235789999999999999999999


Q ss_pred             CCCCCCEEEEec------------ccccccCc------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHH
Q 020320           78 KFNTGDEVYGNI------------QDFNAEGK------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIE  139 (327)
Q Consensus        78 ~~~~Gd~V~~~~------------~~~~~~~~------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~  139 (327)
                      ++++||||++..            +..+.|..      ....|+|+||+++++++++++|+++++++|+++ .++.|||+
T Consensus        81 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~  159 (352)
T 1e3j_A           81 HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGVH  159 (352)
T ss_dssp             SCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHHH
T ss_pred             CCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHHH
Confidence            999999998753            12233321      124799999999999999999999999999865 46778999


Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC-CChhhh---------
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK-TKYEDI---------  209 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~---------  209 (327)
                      +++.+++++|++|||+| +|++|++++|+|+.+ |+++++++++++++++++++|++++++.++ .++.+.         
T Consensus       160 al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          160 ACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             HHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHS
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhcccc
Confidence            99889999999999999 599999999999998 999888889999999999999999998764 443332         


Q ss_pred             ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceee
Q 020320          210 EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQ  275 (327)
Q Consensus       210 ~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~  275 (327)
                      .+++|++||++|..   ..++.+++++|+++.+|......           ..+.... ...+.++++++++++|++++.
T Consensus       238 g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~-~~~~~~~~~~~l~~~g~i~~~  316 (352)
T 1e3j_A          238 GDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVF-RYCNDYPIALEMVASGRCNVK  316 (352)
T ss_dssp             SSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECC-SCSSCHHHHHHHHHTTSCCCG
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEec-cchHHHHHHHHHHHcCCCChH
Confidence            14699999999853   67889999999999998643111           0111111 124568999999999998765


Q ss_pred             eCCCcccchhhHHHHHHHHHhCC-CCceEEEEeC
Q 020320          276 IDPTGPYKFKDVIEAFRYLETGR-ARGKVVISAF  308 (327)
Q Consensus       276 ~~~~~~~~~~~i~~a~~~~~~~~-~~gk~vv~~~  308 (327)
                      ++++++|+++++++||+.+.+++ ..+|+|+++.
T Consensus       317 ~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  350 (352)
T 1e3j_A          317 QLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR  350 (352)
T ss_dssp             GGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECC
T ss_pred             HheeEEecHHHHHHHHHHHhcCCCCceEEEEecC
Confidence            55678999999999999999888 6899999875

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=4e-47  Score=344.19  Aligned_cols=303  Identities=23%  Similarity=0.278  Sum_probs=250.1

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||...+..++.++.+++.++|.|++++|||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++++++++
T Consensus         8 m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~v   87 (357)
T 2cf5_A            8 RKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV   87 (357)
T ss_dssp             CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSCCT
T ss_pred             ceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCC
Confidence            44444444444456999999999999999999999999999999999887655568999999999999999999999999


Q ss_pred             CCEEEEec-------------ccccccCc------------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHH
Q 020320           82 GDEVYGNI-------------QDFNAEGK------------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQT  136 (327)
Q Consensus        82 Gd~V~~~~-------------~~~~~~~~------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  136 (327)
                      ||||+...             +..+.|..            ....|+|+||++++++.++++|+++++++|+.++.++.|
T Consensus        88 GdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~t  167 (357)
T 2cf5_A           88 GDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVT  167 (357)
T ss_dssp             TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHHH
T ss_pred             CCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHHH
Confidence            99997521             12233321            125799999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCCChhh-hccCc
Q 020320          137 AIEGFKTAGFK-TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKTKYED-IEEKF  213 (327)
Q Consensus       137 a~~~l~~~~~~-~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~-~~~~~  213 (327)
                      ||+++.+.+++ +|++|+|+| +|++|++++|+||.+ |++++++++++++++.++ ++|+++++++++.+... ...++
T Consensus       168 a~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~  245 (357)
T 2cf5_A          168 VYSPLSHFGLKQPGLRGGILG-LGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSL  245 (357)
T ss_dssp             HHHHHHHTSTTSTTCEEEEEC-CSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTE
T ss_pred             HHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCC
Confidence            99999888888 999999999 699999999999999 899998999999998888 99999999876532222 22579


Q ss_pred             cEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320          214 DVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPT  279 (327)
Q Consensus       214 d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~  279 (327)
                      |++||++|.   ...++.+++++|+++.+|.......           .+..+.....+.++++++++++|++++.   .
T Consensus       246 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~---~  322 (357)
T 2cf5_A          246 DYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSI---I  322 (357)
T ss_dssp             EEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHHTTCCCC---E
T ss_pred             CEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHHHHhCccEEEEEccCCHHHHHHHHHHHHcCCCCCc---e
Confidence            999999984   3788899999999999986432111           1111222346789999999999999875   3


Q ss_pred             cccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320          280 GPYKFKDVIEAFRYLETGRARGKVVISAFP  309 (327)
Q Consensus       280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~  309 (327)
                      ++|+++++++||+.+.+++..+|+|+.+.+
T Consensus       323 ~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          323 EVVKMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            799999999999999998888999999854

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=4e-47  Score=346.35  Aligned_cols=300  Identities=20%  Similarity=0.230  Sum_probs=248.9

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++..++.+  ++++++|.|++++|||||||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|++|++++
T Consensus         9 ~mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   85 (373)
T 1p0f_A            9 TCKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTCVK   85 (373)
T ss_dssp             EEEEEEBSSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             eeEEEEEEcCCCC--eeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECCCCCccC
Confidence            5899999988754  89999999999999999999999999999999988665 56899999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||||++...            ..+.|...                          ...|+|+||++++++.++++|+++
T Consensus        86 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  165 (373)
T 1p0f_A           86 PGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKA  165 (373)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTC
T ss_pred             CCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECCCCC
Confidence            9999987631            22333211                          124899999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      +++ |++++.++.|||+++ +.+++++|++|||+| +|++|++++|+||.+ |+ ++++++++++++++++++|++++++
T Consensus       166 ~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~  242 (373)
T 1p0f_A          166 PLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIELGATECLN  242 (373)
T ss_dssp             CGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHTTCSEEEC
T ss_pred             Chh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcEEEe
Confidence            999 999999999999998 468999999999999 699999999999999 88 6777778999999999999999998


Q ss_pred             CCC--CChhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCC-Cc-----------eeeEEe--ec
Q 020320          201 YRK--TKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSH-PR-----------AIYSSL--TV  255 (327)
Q Consensus       201 ~~~--~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~-~~-----------~~~~~~--~~  255 (327)
                      +++  .++.+.+     .++|++||++|..   ..++.+++++ |+++.+|..... +.           .+....  ..
T Consensus       243 ~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  322 (373)
T 1p0f_A          243 PKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGF  322 (373)
T ss_dssp             GGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             cccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCceEEeeccCCc
Confidence            764  3444432     3799999999863   6788999999 999999865421 10           111111  11


Q ss_pred             CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          256 SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       256 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      ..+.++++++++++|++++.++++++|+++++++||+.+.+++. +|+++.+
T Consensus       323 ~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          323 KGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             CGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             CHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            23679999999999999865556789999999999999977664 6998864

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=7.4e-47  Score=344.69  Aligned_cols=301  Identities=21%  Similarity=0.256  Sum_probs=249.7

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++..++.+  ++++++|.|++++|||||||.+++||++|++.+.|.++.. +|.++|||++|+|+++|++|++++
T Consensus         8 ~mkA~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~~~~   84 (374)
T 2jhf_A            8 KCKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVTTVR   84 (374)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCCSCC
T ss_pred             eEEEEEEecCCCc--eEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCCCCC
Confidence            5899999988754  8999999999999999999999999999999998876433 899999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||||++...            ..+.|...                          ...|+|+||++++++.++++|+++
T Consensus        85 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  164 (374)
T 2jhf_A           85 PGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAS  164 (374)
T ss_dssp             TTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTC
T ss_pred             CCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCCCC
Confidence            9999987531            23333211                          024899999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      ++++|++++.++.|||+++ +.+++++|++|||+| +|++|++++|+|+.+ |+ ++++++++++++++++++|++++++
T Consensus       165 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~  242 (374)
T 2jhf_A          165 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEVGATECVN  242 (374)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCSEEEC
T ss_pred             CHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCceEec
Confidence            9999999999999999998 468999999999999 799999999999998 88 6777778999999999999999998


Q ss_pred             CCC--CChhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCC-Cc-----------eeeEEeec--
Q 020320          201 YRK--TKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSH-PR-----------AIYSSLTV--  255 (327)
Q Consensus       201 ~~~--~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~-~~-----------~~~~~~~~--  255 (327)
                      .++  .++.+.+     .++|++||++|..   ..++.+++++ |+++.+|..... +.           .+......  
T Consensus       243 ~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  322 (374)
T 2jhf_A          243 PQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGF  322 (374)
T ss_dssp             GGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             ccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCCeEEEeccCCC
Confidence            764  3444322     3799999999863   6788999999 999999865421 10           11111111  


Q ss_pred             -CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          256 -SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       256 -~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                       ..+.++++++++++|++++.++++++|+++++++||+.+.+++. +|+++.+
T Consensus       323 ~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          323 KSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             CHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             ChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence             14689999999999999875556799999999999999987764 6998864

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-47  Score=348.69  Aligned_cols=300  Identities=21%  Similarity=0.226  Sum_probs=250.9

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++++++.+  ++++++|.|++++|||||||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|++|++++
T Consensus         6 ~mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   82 (371)
T 1f8f_A            6 DIIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   82 (371)
T ss_dssp             EEEEEEBCSTTCC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             cceEEEEcCCCCC--eEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCCC
Confidence            5899999988754  89999999999999999999999999999999988654 45799999999999999999999999


Q ss_pred             CCCEEEEec-----------ccccccCcC----------------------------CCCCceeeEEEeeccceecCCCC
Q 020320           81 TGDEVYGNI-----------QDFNAEGKL----------------------------KQLGALAEFIVVEESLIAKKPKN  121 (327)
Q Consensus        81 ~Gd~V~~~~-----------~~~~~~~~~----------------------------~~~g~~~~~~~v~~~~~~~~p~~  121 (327)
                      +||||++..           +..+.|...                            ...|+|+||+++++++++++|++
T Consensus        83 ~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~  162 (371)
T 1f8f_A           83 VGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD  162 (371)
T ss_dssp             TTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred             CCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCCC
Confidence            999998743           122333210                            12589999999999999999999


Q ss_pred             CCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEE
Q 020320          122 ISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVI  199 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~  199 (327)
                      +++++|+.++.++.|||+++ +.+++++|++|||+| +|++|++++|+||.+ |+ ++++++++++++++++++|+++++
T Consensus       163 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  240 (371)
T 1f8f_A          163 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQLGATHVI  240 (371)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHHTCSEEE
T ss_pred             CCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCCEEe
Confidence            99999999999999999999 578999999999999 699999999999999 88 577777899999999999999999


Q ss_pred             eCCCCChhhhc-----cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC---Cc----------eeeEEeec---
Q 020320          200 DYRKTKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH---PR----------AIYSSLTV---  255 (327)
Q Consensus       200 ~~~~~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~---~~----------~~~~~~~~---  255 (327)
                      ++++.++.+.+     .++|++||++|..   ..++.+++++|+++.+|.....   ..          .+......   
T Consensus       241 ~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  320 (371)
T 1f8f_A          241 NSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGS  320 (371)
T ss_dssp             ETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSC
T ss_pred             cCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCCc
Confidence            98776665432     2699999999863   6788999999999999865411   11          11111111   


Q ss_pred             CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          256 SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       256 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      ..+.++++++++++|++++.++.++ |+++++++||+.+.+++. +|+|+.+
T Consensus       321 ~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          321 PKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             HHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             hHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEee
Confidence            1367999999999999987555567 999999999999988775 7999876

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=2.1e-47  Score=346.04  Aligned_cols=303  Identities=21%  Similarity=0.311  Sum_probs=248.5

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC-C--CCCCCCcccccccEEEEEeCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-F--PSDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~-~--~~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      |||++++++++.   +++++.|.|++++|||||||.+++||++|++.+.+.. .  ...+|.++|||++|+|+++|++|+
T Consensus         7 ~mka~~~~~~~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~   83 (356)
T 1pl8_A            7 NNLSLVVHGPGD---LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (356)
T ss_dssp             CCEEEEEEETTE---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             CceEEEEecCCc---EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence            689999998764   9999999999999999999999999999999887432 1  135789999999999999999999


Q ss_pred             CCCCCCEEEEecc------------cccccCc------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHH
Q 020320           78 KFNTGDEVYGNIQ------------DFNAEGK------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIE  139 (327)
Q Consensus        78 ~~~~Gd~V~~~~~------------~~~~~~~------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~  139 (327)
                      ++++||||++...            ..+.|..      ...+|+|+||++++++.++++|+++++++|+++ .++.|||+
T Consensus        84 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~~  162 (356)
T 1pl8_A           84 HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGIH  162 (356)
T ss_dssp             SCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHHH
T ss_pred             CCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHHH
Confidence            9999999987531            2233321      124799999999999999999999999999865 46778999


Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCC---CChhhhc-----
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRK---TKYEDIE-----  210 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~-----  210 (327)
                      +++.+++++|++|||+| +|++|++++|+|+.+ |+ ++++++++++++++++++|++++++.+.   .++.+.+     
T Consensus       163 al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~  240 (356)
T 1pl8_A          163 ACRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLG  240 (356)
T ss_dssp             HHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHT
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhC
Confidence            99889999999999999 699999999999998 88 7888889999999999999999998762   2332221     


Q ss_pred             cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCC-c----------eeeEEeecCHHHHHHHHhHHHCCCceeee
Q 020320          211 EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHP-R----------AIYSSLTVSGEILEKLRPFIESGKLKAQI  276 (327)
Q Consensus       211 ~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~-~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~  276 (327)
                      +++|++||++|..   ..++.+++++|+++.+|...... .          .+.... ...+.++++++++++|++++.+
T Consensus       241 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~-~~~~~~~~~~~l~~~g~i~~~~  319 (356)
T 1pl8_A          241 CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVF-RYCNTWPVAISMLASKSVNVKP  319 (356)
T ss_dssp             SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECC-SCSSCHHHHHHHHHTTSCCCGG
T ss_pred             CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEec-ccHHHHHHHHHHHHcCCCChHH
Confidence            4799999999853   67889999999999998643110 0          111111 1245689999999999987655


Q ss_pred             CCCcccchhhHHHHHHHHHhCCCCceEEEEeCCCC
Q 020320          277 DPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYT  311 (327)
Q Consensus       277 ~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~~~  311 (327)
                      +++++|+++++++||+.+.++ ..+|+|+++.+.+
T Consensus       320 ~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~~  353 (356)
T 1pl8_A          320 LVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPSD  353 (356)
T ss_dssp             GEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTTC
T ss_pred             heEEEecHHHHHHHHHHHhCC-CceEEEEeCCCCC
Confidence            567899999999999999888 7899999986543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.6e-47  Score=345.01  Aligned_cols=301  Identities=20%  Similarity=0.230  Sum_probs=250.2

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHh-hhcCCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSK-RRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~-~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||++++.+++++  +++++.|.|++++|||||||.+++||++|++ .+.|.++ ..+|.++|||++|+|+++|++|+++
T Consensus         8 ~mka~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V~~~   84 (374)
T 1cdo_A            8 KCKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGVTEF   84 (374)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTCCSC
T ss_pred             eeEEEEEecCCCC--eEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCCccC
Confidence            5999999988754  8999999999999999999999999999999 8888655 5689999999999999999999999


Q ss_pred             CCCCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceecCCCC
Q 020320           80 NTGDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAKKPKN  121 (327)
Q Consensus        80 ~~Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~~p~~  121 (327)
                      ++||||++...            ..+.|...                          ...|+|+||+++++++++++|++
T Consensus        85 ~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~  164 (374)
T 1cdo_A           85 QPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPS  164 (374)
T ss_dssp             CTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEECCCC
Confidence            99999987531            23333211                          02489999999999999999999


Q ss_pred             CCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEE
Q 020320          122 ISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVI  199 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~  199 (327)
                      +++++|++++.++.|||+++ +..++++|++|||+| +|++|++++|+||.+ |+ ++++++++++++++++++|+++++
T Consensus       165 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi  242 (374)
T 1cdo_A          165 APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVFGATDFV  242 (374)
T ss_dssp             CCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCCEEE
T ss_pred             CCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCceEE
Confidence            99999999999999999998 568999999999999 699999999999998 88 677777899999999999999999


Q ss_pred             eCCC--CChhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCCCc-----------eeeEEeec--
Q 020320          200 DYRK--TKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSHPR-----------AIYSSLTV--  255 (327)
Q Consensus       200 ~~~~--~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~~~-----------~~~~~~~~--  255 (327)
                      +.++  .++.+.+     .++|++||++|..   ..++.+++++ |+++.+|.....+.           .+......  
T Consensus       243 ~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~  322 (374)
T 1cdo_A          243 NPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF  322 (374)
T ss_dssp             CGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             eccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCCeEEEEecCCC
Confidence            8764  3444322     3799999999863   6788999999 99999986542111           11111111  


Q ss_pred             -CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          256 -SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       256 -~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                       ..+.++++++++++|++++.++++++|+++++++||+.+.+++. +|+++.+
T Consensus       323 ~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          323 KGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             CHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence             24679999999999999865556789999999999999988775 6998864

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.7e-46  Score=342.30  Aligned_cols=296  Identities=33%  Similarity=0.561  Sum_probs=251.2

Q ss_pred             CceeEEecccCCCcceEE-eeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCC---------------CCCCCCcccc
Q 020320            1 MQNAWYYEEYGPKEVLKL-GDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLF---------------PSDFPAVPGC   63 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~-~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~---------------~~~~p~~~G~   63 (327)
                      +||+++++++|.++.+++ +++|.|.+ ++|||||||.+++||++|++.+.|..+               ...+|.++||
T Consensus        21 ~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~G~  100 (375)
T 2vn8_A           21 QSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGR  100 (375)
T ss_dssp             CEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCCCC
T ss_pred             cceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcccce
Confidence            589999999987777999 99999985 999999999999999999999887531               1237999999


Q ss_pred             cccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-
Q 020320           64 DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-  142 (327)
Q Consensus        64 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-  142 (327)
                      |++|+|+++|++++++++||||++....       ...|+|+||++++++.++++|+++++++|++++.+++|||+++. 
T Consensus       101 E~~G~V~~vG~~V~~~~vGDrV~~~~~~-------~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~  173 (375)
T 2vn8_A          101 DVSGVVMECGLDVKYFKPGDEVWAAVPP-------WKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINK  173 (375)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEEECCT-------TSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTT
T ss_pred             eeeEEEEEeCCCCCCCCCCCEEEEecCC-------CCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHH
Confidence            9999999999999999999999987521       23699999999999999999999999999999999999999995 


Q ss_pred             hcC----CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc---cCccE
Q 020320          143 TAG----FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE---EKFDV  215 (327)
Q Consensus       143 ~~~----~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~~~d~  215 (327)
                      .++    +++|++|+|+||+|++|++++|+|+.+ |+++++++ +++++++++++|++++++.++.++.+.+   .++|+
T Consensus       174 ~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~  251 (375)
T 2vn8_A          174 VGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDF  251 (375)
T ss_dssp             TTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSE
T ss_pred             hcccccccCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCE
Confidence            678    899999999999999999999999998 88887776 6789999999999999998776665533   47999


Q ss_pred             EEeCCCCc----hhhhhhhcCCCcEEEeeCCCCCC--------------------------ceeeEEe---ecCHHHHHH
Q 020320          216 LYDTIGDC----KNSFVVAKDNAPIVDITWPPSHP--------------------------RAIYSSL---TVSGEILEK  262 (327)
Q Consensus       216 v~d~~g~~----~~~~~~l~~~g~~v~~g~~~~~~--------------------------~~~~~~~---~~~~~~~~~  262 (327)
                      +||++|..    ..++.+++++|+++.+|......                          .......   ....+.+++
T Consensus       252 vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  331 (375)
T 2vn8_A          252 ILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDD  331 (375)
T ss_dssp             EEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHH
T ss_pred             EEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCCCHHHHHH
Confidence            99999864    67788999999999998543100                          0000011   123577899


Q ss_pred             HHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          263 LRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       263 ~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      +++++++|++++.  ++++|+++++++||+.+.+++..+|+|+++
T Consensus       332 ~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          332 IAELVDAGKIRPV--IEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHTTSCCCC--EEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHHCCCcccC--cCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            9999999999754  468999999999999999988889999975

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=2e-47  Score=345.11  Aligned_cols=300  Identities=25%  Similarity=0.303  Sum_probs=248.9

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcC-CCC--CCCCCCcccccccEEEEEeCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQR-PLF--PSDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~-~~~--~~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      +||++++++++.  .++++++|.|++++|||||||.+++||++|++.+.| .++  ...+|.++|||++|+|+++|++++
T Consensus         4 ~mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   81 (348)
T 2d8a_A            4 KMVAIMKTKPGY--GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVE   81 (348)
T ss_dssp             EEEEEEECSSSS--SCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             cceEEEEECCCC--CEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCC
Confidence            489999999884  399999999999999999999999999999999988 432  246789999999999999999999


Q ss_pred             CCCCCCEEEEecc------------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHH
Q 020320           78 KFNTGDEVYGNIQ------------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG  140 (327)
Q Consensus        78 ~~~~Gd~V~~~~~------------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~  140 (327)
                      ++++||||++...            ..+.|.     +....|+|+||++++++.++++|+++++++|+++. ++.|||++
T Consensus        82 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~  160 (348)
T 2d8a_A           82 GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNAVDT  160 (348)
T ss_dssp             SCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHHHHH
T ss_pred             cCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHHHHH
Confidence            9999999987531            122221     12357999999999999999999999999999774 67799999


Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKF  213 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~  213 (327)
                      ++..++ +|++|||+|+ |++|++++|+|+.+ |+ ++++++++++++++++++|++++++.++.++.+.+      +++
T Consensus       161 l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~  237 (348)
T 2d8a_A          161 VLAGPI-SGKSVLITGA-GPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGV  237 (348)
T ss_dssp             HTTSCC-TTCCEEEECC-SHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCE
T ss_pred             HHhcCC-CCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCC
Confidence            988889 9999999997 99999999999998 88 89988899999999999999999988776665433      379


Q ss_pred             cEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC---Cc---------eeeEEeecC-HHHHHHHHhHHHCCCceeeeC
Q 020320          214 DVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH---PR---------AIYSSLTVS-GEILEKLRPFIESGKLKAQID  277 (327)
Q Consensus       214 d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~---~~---------~~~~~~~~~-~~~~~~~~~l~~~g~~~~~~~  277 (327)
                      |++||++|..   ..++.+++++|+++.+|.....   +.         .+....... .+.++++++++++|+++..++
T Consensus       238 D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~  317 (348)
T 2d8a_A          238 DVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPI  317 (348)
T ss_dssp             EEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCCCCTTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCCChHHh
Confidence            9999999863   6788999999999999864321   10         111111223 678999999999999876555


Q ss_pred             CCcccc-hhhHHHHHHHHHhCCCCceEEEEe
Q 020320          278 PTGPYK-FKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       278 ~~~~~~-~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      ++++|+ ++++++||+.+.+ ...+|+|+++
T Consensus       318 i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~  347 (348)
T 2d8a_A          318 ITHKYKGFDKYEEAFELMRA-GKTGKVVFML  347 (348)
T ss_dssp             EEEEEESSTTHHHHHHHHHT-TCCSEEEEEC
T ss_pred             heeeCCCHHHHHHHHHHHhC-CCceEEEEee
Confidence            678999 9999999999976 5678999976

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.4e-46  Score=341.62  Aligned_cols=303  Identities=23%  Similarity=0.255  Sum_probs=253.2

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      +||++.+..++.++.+++.++|.|++++|||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++|++++
T Consensus        14 ~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~   93 (366)
T 1yqd_A           14 PVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVN   93 (366)
T ss_dssp             SEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcCC
Confidence            57777777777666799999999999999999999999999999999988765556899999999999999999999999


Q ss_pred             CCCEEEEe-----c--------ccccccCc------------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHH
Q 020320           81 TGDEVYGN-----I--------QDFNAEGK------------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQ  135 (327)
Q Consensus        81 ~Gd~V~~~-----~--------~~~~~~~~------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  135 (327)
                      +||||+..     +        +..+.|..            ....|+|+||++++++.++++|+++++++|+.++.++.
T Consensus        94 vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~  173 (366)
T 1yqd_A           94 VGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGI  173 (366)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHH
T ss_pred             CCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHH
Confidence            99999852     1        12233321            12579999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCCChhh-hccC
Q 020320          136 TAIEGFKTAGFK-TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKTKYED-IEEK  212 (327)
Q Consensus       136 ta~~~l~~~~~~-~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~-~~~~  212 (327)
                      |||+++.+.+++ +|++|||+| +|++|++++|+|+.+ |++++++++++++++.++ ++|++++++..+.+... ...+
T Consensus       174 ta~~al~~~~~~~~g~~VlV~G-aG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~  251 (366)
T 1yqd_A          174 TVYSPLKYFGLDEPGKHIGIVG-LGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGT  251 (366)
T ss_dssp             HHHHHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTC
T ss_pred             HHHHHHHhcCcCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCC
Confidence            999999888888 999999999 699999999999998 899988899999998887 89999999876532222 2358


Q ss_pred             ccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCC
Q 020320          213 FDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDP  278 (327)
Q Consensus       213 ~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~  278 (327)
                      +|++||++|.   ...++.+++++|+++.+|......           ..+........+.++++++++++|++++..  
T Consensus       252 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~--  329 (366)
T 1yqd_A          252 LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITADI--  329 (366)
T ss_dssp             EEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHTTCCCCE--
T ss_pred             CCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCCCce--
Confidence            9999999984   378889999999999998654210           111112223457899999999999998753  


Q ss_pred             CcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          279 TGPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       279 ~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                       ++|+++++++||+.+.+++..+|+|+.+.
T Consensus       330 -~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  358 (366)
T 1yqd_A          330 -EVISTDYLNTAMERLAKNDVRYRFVIDVG  358 (366)
T ss_dssp             -EEECGGGHHHHHHHHHTTCCSSEEEECHH
T ss_pred             -EEEcHHHHHHHHHHHHcCCcceEEEEEcc
Confidence             79999999999999999888899999874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.8e-47  Score=346.35  Aligned_cols=299  Identities=18%  Similarity=0.214  Sum_probs=251.1

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCC---
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVT---   77 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~---   77 (327)
                      +||++++++++  +.+++++.|.|++++|||||||.+++||++|++.+.|.++...+|.++|||++|+|+++| +|+   
T Consensus        17 ~mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~   93 (380)
T 1vj0_A           17 KAHAMVLEKFN--QPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDL   93 (380)
T ss_dssp             EEEEEEBCSTT--SCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCT
T ss_pred             heEEEEEecCC--CCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Cccccc
Confidence            59999999998  239999999999999999999999999999999999876545689999999999999999 999   


Q ss_pred             ---CCCCCCEEEEe-------------cccccccCc-----C--------CCCCceeeEEEe-eccceecCCCCCCHH-h
Q 020320           78 ---KFNTGDEVYGN-------------IQDFNAEGK-----L--------KQLGALAEFIVV-EESLIAKKPKNISFE-E  126 (327)
Q Consensus        78 ---~~~~Gd~V~~~-------------~~~~~~~~~-----~--------~~~g~~~~~~~v-~~~~~~~~p~~~~~~-~  126 (327)
                         ++++||||++.             .+..+.|..     .        ...|+|+||+++ +++.++++|++++++ +
T Consensus        94 ~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~  173 (380)
T 1vj0_A           94 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVL  173 (380)
T ss_dssp             TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHHHH
T ss_pred             cCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCChHHh
Confidence               99999999975             333444431     1        347999999999 999999999999999 7


Q ss_pred             hcccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHHHcCCCEEEeCC--
Q 020320          127 AASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVKELGADKVIDYR--  202 (327)
Q Consensus       127 aa~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~~~g~~~v~~~~--  202 (327)
                      |+++. ++.|||++++..+ +++|++|||+| +|++|++++|+||.+ | .++++++++++++++++++|++++++.+  
T Consensus       174 Aa~~~-~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~  250 (380)
T 1vj0_A          174 AMAMC-SGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGADLTLNRRET  250 (380)
T ss_dssp             HHHTT-HHHHHHHHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHHTTCSEEEETTTS
T ss_pred             Hhhhc-HHHHHHHHHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHcCCcEEEecccc
Confidence            76666 8899999998888 99999999999 899999999999998 8 5899999999999999999999999876  


Q ss_pred             -CCChhhhc------cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC-CCCc-------------eeeEEeecCHH
Q 020320          203 -KTKYEDIE------EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP-SHPR-------------AIYSSLTVSGE  258 (327)
Q Consensus       203 -~~~~~~~~------~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~-~~~~-------------~~~~~~~~~~~  258 (327)
                       +.++.+.+      +++|++||++|..   ..++.+++++|+++.+|... ..+.             .+........+
T Consensus       251 ~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  330 (380)
T 1vj0_A          251 SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTS  330 (380)
T ss_dssp             CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCCHH
T ss_pred             CcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecCCHH
Confidence             43433322      3799999999853   67889999999999998654 2111             11111222468


Q ss_pred             HHHHHHhHHHC--CCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          259 ILEKLRPFIES--GKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       259 ~~~~~~~l~~~--g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      .++++++++++  |++++  .++++|+++++++||+.+.+++.. |+|+++.
T Consensus       331 ~~~~~~~l~~~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          331 HFVKTVSITSRNYQLLSK--LITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             HHHHHHHHHHTCHHHHGG--GCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             HHHHHHHHHHhhcCCeee--EEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            89999999999  99954  457899999999999999988888 9999874

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=6.8e-47  Score=342.77  Aligned_cols=295  Identities=22%  Similarity=0.282  Sum_probs=244.7

Q ss_pred             CceeEEecccCCC-cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCC
Q 020320            1 MQNAWYYEEYGPK-EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         1 ~~~~~v~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      +||++++.+++.+ +.+++++.|.|++++|||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus        26 ~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~  105 (357)
T 1zsy_A           26 RVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTG  105 (357)
T ss_dssp             CEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTTCCS
T ss_pred             hhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCCCCC
Confidence            5899999998875 45889999999999999999999999999999999887643 357999999999999999999999


Q ss_pred             CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcC
Q 020320           79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGG  157 (327)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga  157 (327)
                      +++||||++...         ..|+|+||++++++.++++|+++++++|++++++++|||+++. .+++++|++|||+|+
T Consensus       106 ~~vGdrV~~~~~---------~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  176 (357)
T 1zsy_A          106 LKPGDWVIPANA---------GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNAS  176 (357)
T ss_dssp             CCTTCEEEESSS---------CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESST
T ss_pred             CCCCCEEEEcCC---------CCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCC
Confidence            999999998642         2699999999999999999999999999999988899999995 479999999999998


Q ss_pred             CchHHHHHHHHHHhhcCCcEEEEeCCcc----cHHHHHHcCCCEEEeCCC---CChhhhcc---CccEEEeCCCCc--hh
Q 020320          158 AGGVGTLVIQLAKHFYGASHVVATTSTP----KVEFVKELGADKVIDYRK---TKYEDIEE---KFDVLYDTIGDC--KN  225 (327)
Q Consensus       158 ~g~~G~~a~~la~~~~g~~~v~~~~~~~----~~~~~~~~g~~~v~~~~~---~~~~~~~~---~~d~v~d~~g~~--~~  225 (327)
                      +|++|++++|+||.+ |+++++++++++    +.++++++|+++++++++   ....+...   ++|++||++|..  ..
T Consensus       177 ~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~~~~  255 (357)
T 1zsy_A          177 NSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTE  255 (357)
T ss_dssp             TSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEESSCHHHHHH
T ss_pred             cCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEECCCcHHHHH
Confidence            899999999999998 999888886543    467889999999987543   12222222   599999999953  56


Q ss_pred             hhhhhcCCCcEEEeeCCCCCCc----------eee-EEeec-----------CHHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320          226 SFVVAKDNAPIVDITWPPSHPR----------AIY-SSLTV-----------SGEILEKLRPFIESGKLKAQIDPTGPYK  283 (327)
Q Consensus       226 ~~~~l~~~g~~v~~g~~~~~~~----------~~~-~~~~~-----------~~~~~~~~~~l~~~g~~~~~~~~~~~~~  283 (327)
                      ++.+++++|+++.+|.....+.          ... .....           ..+.++++++++++|++++.+  .++|+
T Consensus       256 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~  333 (357)
T 1zsy_A          256 LLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPA--CSQVP  333 (357)
T ss_dssp             HHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC--EEEEE
T ss_pred             HHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCcc--ceEEc
Confidence            7899999999999975331111          010 11111           124578899999999998753  48999


Q ss_pred             hhhHHHHHHHHHhCCCCceEEEEe
Q 020320          284 FKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       284 ~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      ++++++||+.+.+++..+|+|+++
T Consensus       334 l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          334 LQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             GGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEeC
Confidence            999999999998888888999874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=8.7e-47  Score=341.58  Aligned_cols=295  Identities=24%  Similarity=0.378  Sum_probs=249.5

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCC-CC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSV-TK   78 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v-~~   78 (327)
                      |||+++++.++.++.+++++.|.|.+++|||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++ ++
T Consensus        22 ~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~  101 (354)
T 2j8z_A           22 SMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGH  101 (354)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSCC--C
T ss_pred             heeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCCcCCC
Confidence            599999999987777999999999999999999999999999999999887643 3478999999999999999999 99


Q ss_pred             CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcC
Q 020320           79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGG  157 (327)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga  157 (327)
                      +++||||+++.          ..|+|+||++++++.++++|+++++++|+.++.++.|||+++ +.+++++|++|+|+||
T Consensus       102 ~~vGdrV~~~~----------~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga  171 (354)
T 2j8z_A          102 WKIGDTAMALL----------PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAG  171 (354)
T ss_dssp             CCTTCEEEEEC----------SSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESST
T ss_pred             CCCCCEEEEec----------CCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECC
Confidence            99999999874          369999999999999999999999999999999999999999 5789999999999999


Q ss_pred             CchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhh
Q 020320          158 AGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVV  229 (327)
Q Consensus       158 ~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~  229 (327)
                      +|++|++++++++.. |++++++++++++.+.++++|++.+++..+.++.+.+      +++|++||++|..  ..++.+
T Consensus       172 ~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~  250 (354)
T 2j8z_A          172 LSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNC  250 (354)
T ss_dssp             TSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGGGHHHHHHH
T ss_pred             ccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCchHHHHHHHh
Confidence            999999999999998 9999999999999999999999999988776654432      3799999999854  677899


Q ss_pred             hcCCCcEEEeeCCCCCC--ce-----------eeEEee--cCH--------HHHHHHHhHHHCC---CceeeeCCCcccc
Q 020320          230 AKDNAPIVDITWPPSHP--RA-----------IYSSLT--VSG--------EILEKLRPFIESG---KLKAQIDPTGPYK  283 (327)
Q Consensus       230 l~~~g~~v~~g~~~~~~--~~-----------~~~~~~--~~~--------~~~~~~~~l~~~g---~~~~~~~~~~~~~  283 (327)
                      ++++|+++.+|......  ..           +.....  ...        +.++++++++++|   ++++  .++++|+
T Consensus       251 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~--~i~~~~~  328 (354)
T 2j8z_A          251 LALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLP--VLDRIYP  328 (354)
T ss_dssp             EEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCC--CEEEEEE
T ss_pred             ccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccC--ccceEEc
Confidence            99999999998643211  11           111111  111        1234688899999   7765  3478999


Q ss_pred             hhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          284 FKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       284 ~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      ++++++||+.+.+++..+|+|+++.
T Consensus       329 l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          329 VTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             GGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHhCCCCceEEEecC
Confidence            9999999999998888899999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=2.6e-46  Score=337.70  Aligned_cols=301  Identities=25%  Similarity=0.293  Sum_probs=253.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC--------CCCCCCcccccccEEEEEeC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF--------PSDFPAVPGCDMAGIVVAKG   73 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~--------~~~~p~~~G~e~~G~V~~vG   73 (327)
                      ||++++++++.+  +++++.|.|++++|||+|||.+++||++|++.+.|.++        ...+|.++|||++|+|+++|
T Consensus         1 Mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   78 (347)
T 1jvb_A            1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG   78 (347)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred             CeEEEEecCCCC--eEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEEC
Confidence            899999998743  99999999999999999999999999999999887654        34689999999999999999


Q ss_pred             CCCCCCCCCCEEEEec------------ccccccCc-----CCCCCceeeEEEeec-cceecCCCCCCHHhhcccchHHH
Q 020320           74 TSVTKFNTGDEVYGNI------------QDFNAEGK-----LKQLGALAEFIVVEE-SLIAKKPKNISFEEAASLPLAVQ  135 (327)
Q Consensus        74 ~~v~~~~~Gd~V~~~~------------~~~~~~~~-----~~~~g~~~~~~~v~~-~~~~~~p~~~~~~~aa~~~~~~~  135 (327)
                      ++++++++||||+++.            +.++.|..     ....|+|+||+++++ +.++++ +++++++|+.++.++.
T Consensus        79 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~  157 (347)
T 1jvb_A           79 DEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGI  157 (347)
T ss_dssp             TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHH
T ss_pred             CCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHH
Confidence            9999999999997653            12333321     235799999999999 999999 9999999999999999


Q ss_pred             HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh----hc-
Q 020320          136 TAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED----IE-  210 (327)
Q Consensus       136 ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~~-  210 (327)
                      |||+++.+.++++|++|||+|++|++|++++++++.++|++++++++++++.+.++++|++++++..+.++.+    .. 
T Consensus       158 ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  237 (347)
T 1jvb_A          158 TTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE  237 (347)
T ss_dssp             HHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhc
Confidence            9999998899999999999998779999999999986477888888999999999999999999877665532    12 


Q ss_pred             -cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC-CCCc----------eeeEEeecCHHHHHHHHhHHHCCCceee
Q 020320          211 -EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP-SHPR----------AIYSSLTVSGEILEKLRPFIESGKLKAQ  275 (327)
Q Consensus       211 -~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~-~~~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~  275 (327)
                       .++|++||++|..   ..++.+++++|+++.+|... ....          .+........+.++++++++++|++++ 
T Consensus       238 ~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~-  316 (347)
T 1jvb_A          238 SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP-  316 (347)
T ss_dssp             TSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHTTSSCC-
T ss_pred             CCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCHHHHHhCceEEEEEeccCHHHHHHHHHHHHcCCCCc-
Confidence             4799999999854   67889999999999998654 1111          111122234688999999999999975 


Q ss_pred             eCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          276 IDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       276 ~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                       .++++|+++++++||+.+.+++..+|+|+++
T Consensus       317 -~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          317 -MITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             -CCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             -eEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence             3468999999999999999988889999874

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.8e-46  Score=338.92  Aligned_cols=295  Identities=24%  Similarity=0.433  Sum_probs=248.4

Q ss_pred             CceeEEecccCCCcceEE-eeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKL-GDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~-~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      +||++++.+++.++.+++ ++.|.|.+++|||+|||.+++||++|++.+.|.++ ...+|.++|||++|+|+++|+++++
T Consensus        29 ~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~  108 (351)
T 1yb5_A           29 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA  108 (351)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             eEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCCCC
Confidence            489999999887777999 89999999999999999999999999999888763 3467999999999999999999999


Q ss_pred             CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcC
Q 020320           79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGG  157 (327)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga  157 (327)
                      +++||||++...         ..|+|+||++++++.++++|+++++++|+.++.++.|||+++. ..++++|++|+|+|+
T Consensus       109 ~~vGdrV~~~~~---------~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  179 (351)
T 1yb5_A          109 FKKGDRVFTSST---------ISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGA  179 (351)
T ss_dssp             CCTTCEEEESCC---------SSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETC
T ss_pred             CCCCCEEEEeCC---------CCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECC
Confidence            999999998642         3699999999999999999999999999999999999999996 689999999999998


Q ss_pred             CchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhh
Q 020320          158 AGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVV  229 (327)
Q Consensus       158 ~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~  229 (327)
                      +|++|++++++++.. |++++++++++++.+.++++|++.+++..+.++.+.+      +++|++||++|..  ..++.+
T Consensus       180 sggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~~  258 (351)
T 1yb5_A          180 SGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL  258 (351)
T ss_dssp             SSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChHHHHHHHHh
Confidence            899999999999998 9999999999999999999999999988776654432      3799999999843  678899


Q ss_pred             hcCCCcEEEeeCCCCC----------CceeeEE--eecCHHHH----HHHHhHHHCCCceeeeCCCcccchhhHHHHHHH
Q 020320          230 AKDNAPIVDITWPPSH----------PRAIYSS--LTVSGEIL----EKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRY  293 (327)
Q Consensus       230 l~~~g~~v~~g~~~~~----------~~~~~~~--~~~~~~~~----~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~  293 (327)
                      ++++|+++.+|.....          ...+...  .....+.+    +.+.+++++|++++.  ++++|+++++++||+.
T Consensus       259 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~~~~~A~~~  336 (351)
T 1yb5_A          259 LSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPV--IGSQYPLEKVAEAHEN  336 (351)
T ss_dssp             EEEEEEEEECCCCSCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCC--EEEEEEGGGHHHHHHH
T ss_pred             ccCCCEEEEEecCCCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCc--cceEEcHHHHHHHHHH
Confidence            9999999999854210          0111111  11123344    456667888888764  4689999999999998


Q ss_pred             -HHhCCCCceEEEEe
Q 020320          294 -LETGRARGKVVISA  307 (327)
Q Consensus       294 -~~~~~~~gk~vv~~  307 (327)
                       +.++...+|+|+.+
T Consensus       337 ~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          337 IIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHSSCCSSEEEEEC
T ss_pred             HHHhCCCCeEEEEeC
Confidence             56667789999864

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=2.1e-47  Score=344.54  Aligned_cols=298  Identities=24%  Similarity=0.315  Sum_probs=230.0

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC--CCCCCCcccccccEEEEEeCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF--PSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      |||++++.+++..  +++++.|.|++++|||+|||.+++||++|++.+.|.++  ...+|.++|||++|+|+++|++ ++
T Consensus         3 ~mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~   79 (344)
T 2h6e_A            3 KSKAALLKKFSEP--LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AK   79 (344)
T ss_dssp             EEEBCEECSCCC-------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CC
T ss_pred             eeEEEEEecCCCC--CeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CC
Confidence            6999999998743  89999999999999999999999999999999988765  4468999999999999999999 99


Q ss_pred             CCCCCEEEEecc------------cccccCc-----CCCCCceeeEEEee-ccceecCCCCCCHHhhcccchHHHHHHHH
Q 020320           79 FNTGDEVYGNIQ------------DFNAEGK-----LKQLGALAEFIVVE-ESLIAKKPKNISFEEAASLPLAVQTAIEG  140 (327)
Q Consensus        79 ~~~Gd~V~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~-~~~~~~~p~~~~~~~aa~~~~~~~ta~~~  140 (327)
                      +++||||+.+..            .++.|..     ....|+|+||++++ +++++++ +++++++|+.+++++.|||++
T Consensus        80 ~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~a  158 (344)
T 2h6e_A           80 VKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGA  158 (344)
T ss_dssp             CCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHH
Confidence            999999976531            2233321     13579999999999 9999999 999999999999999999999


Q ss_pred             HHhc-----CCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHHcCCCEEEeCCC-CChhhhc---
Q 020320          141 FKTA-----GFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKELGADKVIDYRK-TKYEDIE---  210 (327)
Q Consensus       141 l~~~-----~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~---  210 (327)
                      +...     ++ +|++|||+|+ |++|++++|+||.++ |+++++++++++++++++++|+++++++++ .++....   
T Consensus       159 l~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g  236 (344)
T 2h6e_A          159 IRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDG  236 (344)
T ss_dssp             HHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTT
T ss_pred             HHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcC
Confidence            9766     89 9999999996 999999999999873 678888888999999999999999987654 3333322   


Q ss_pred             cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeee
Q 020320          211 EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQI  276 (327)
Q Consensus       211 ~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~  276 (327)
                      +++|++||++|..   ..++.+++++|+++.+|......           ..+........+.++++++++++|++++. 
T Consensus       237 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~-  315 (344)
T 2h6e_A          237 LGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPY-  315 (344)
T ss_dssp             CCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCC-
T ss_pred             CCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHcCCCCcc-
Confidence            2799999999854   67889999999999998653211           11112223346889999999999999865 


Q ss_pred             CCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          277 DPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       277 ~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                       + ++|+++++++||+.+.+++..+|+|+++
T Consensus       316 -i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          316 -I-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             -E-EEECC----------------CEEEECC
T ss_pred             -e-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence             3 8999999999999998888889999864

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=9.3e-48  Score=344.18  Aligned_cols=297  Identities=18%  Similarity=0.208  Sum_probs=250.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++++++.++.+++++.|.|++++|||||||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|  +++++
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            99999999998878999999999999999999999999999999999987643 5789999999999999998  57899


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH---hcCCCCCC-EEEEEc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK---TAGFKTGQ-TIFIVG  156 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~---~~~~~~~~-~vlI~g  156 (327)
                      +||||++....    .+....|+|+||++++++.++++|+++++++|++++.++.|||+++.   +.++++++ +|||+|
T Consensus        79 vGdrV~~~~~~----~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~G  154 (324)
T 3nx4_A           79 AGQEVLLTGWG----VGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTG  154 (324)
T ss_dssp             TTCEEEEECTT----BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESS
T ss_pred             CCCEEEEcccc----cCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEEC
Confidence            99999986421    12235799999999999999999999999999999999999998873   46677633 499999


Q ss_pred             CCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc--cCccEEEeCCCCc--hhhhhhhcC
Q 020320          157 GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE--EKFDVLYDTIGDC--KNSFVVAKD  232 (327)
Q Consensus       157 a~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~--~~~d~v~d~~g~~--~~~~~~l~~  232 (327)
                      ++|++|++++|+||.+ |+++++++++++++++++++|+++++++++.+....+  .++|++||++|..  ..++.++++
T Consensus       155 a~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~  233 (324)
T 3nx4_A          155 ASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQMNY  233 (324)
T ss_dssp             TTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHHHHHHHHHTEEE
T ss_pred             CCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcHHHHHHHHHHhc
Confidence            8899999999999998 9999999999999999999999999987664432222  4799999999943  788899999


Q ss_pred             CCcEEEeeCCCCCCce------------eeEEee--cC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHH
Q 020320          233 NAPIVDITWPPSHPRA------------IYSSLT--VS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYL  294 (327)
Q Consensus       233 ~g~~v~~g~~~~~~~~------------~~~~~~--~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~  294 (327)
                      +|+++.+|........            +.....  ..    .+.++.+++++++|++++.   +++|+++++++||+.+
T Consensus       234 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~  310 (324)
T 3nx4_A          234 GGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA---ATEITLADAPKFADAI  310 (324)
T ss_dssp             EEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH---EEEEEGGGHHHHHHHH
T ss_pred             CCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC---ceeEeHHHHHHHHHHH
Confidence            9999999865432111            111100  11    2668899999999999863   7999999999999999


Q ss_pred             HhCCCCceEEEEeC
Q 020320          295 ETGRARGKVVISAF  308 (327)
Q Consensus       295 ~~~~~~gk~vv~~~  308 (327)
                      .+++..||+|++++
T Consensus       311 ~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          311 INNQVQGRTLVKIK  324 (324)
T ss_dssp             HTTCCCSEEEEECC
T ss_pred             HhCCCCceEEEecC
Confidence            99999999999873

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=2.6e-47  Score=344.58  Aligned_cols=295  Identities=21%  Similarity=0.259  Sum_probs=245.2

Q ss_pred             CceeEEec--cc-CCCcceEEeec---------cCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccE
Q 020320            1 MQNAWYYE--EY-GPKEVLKLGDF---------PLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAG   67 (327)
Q Consensus         1 ~~~~~v~~--~~-~~~~~l~~~~~---------~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G   67 (327)
                      |||+++++  ++ +.++.+++++.         |.|++++|||||||.+++||++|++.+.|.++ ...+|.++|||++|
T Consensus        10 ~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G   89 (349)
T 3pi7_A           10 EMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVG   89 (349)
T ss_dssp             EEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCSEEEE
T ss_pred             hheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccceEEE
Confidence            59999999  55 34456888888         99999999999999999999999999998764 34689999999999


Q ss_pred             EEEEeCCCC-CCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCC
Q 020320           68 IVVAKGTSV-TKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGF  146 (327)
Q Consensus        68 ~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~  146 (327)
                      +|+++|++| +++++||||++..+       ...+|+|+||++++++.++++|+++++++|+.+++.++|||++++.++ 
T Consensus        90 ~V~~vG~~v~~~~~vGdrV~~~~g-------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-  161 (349)
T 3pi7_A           90 TIVAGGDEPYAKSLVGKRVAFATG-------LSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK-  161 (349)
T ss_dssp             EEEEECSSHHHHHHTTCEEEEECT-------TSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHHHHH-
T ss_pred             EEEEECCCccCCCCCCCEEEEecc-------CCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHHHHHh-
Confidence            999999999 99999999998742       235799999999999999999999999999999999999998777766 


Q ss_pred             CCC-CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeC
Q 020320          147 KTG-QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDT  219 (327)
Q Consensus       147 ~~~-~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~  219 (327)
                      +++ ++++|+||+|++|++++|+|+.+ |+++++++++++++++++++|+++++++++.++.+.+      +++|++||+
T Consensus       162 ~~g~~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~  240 (349)
T 3pi7_A          162 QEGEKAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDA  240 (349)
T ss_dssp             HHCCSEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEES
T ss_pred             hCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEEC
Confidence            666 79999989999999999999999 9999999999999999999999999998887766543      379999999


Q ss_pred             CCCc--hhhhhhhcCCCcEEEeeCCCCCCc--ee---------eE-Eeec----------CHHHHHHHHhHHHCCCceee
Q 020320          220 IGDC--KNSFVVAKDNAPIVDITWPPSHPR--AI---------YS-SLTV----------SGEILEKLRPFIESGKLKAQ  275 (327)
Q Consensus       220 ~g~~--~~~~~~l~~~g~~v~~g~~~~~~~--~~---------~~-~~~~----------~~~~~~~~~~l~~~g~~~~~  275 (327)
                      +|..  ..++.+++++|+++.+|.....+.  ..         .. ....          ..+.++++++++++|++++.
T Consensus       241 ~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  320 (349)
T 3pi7_A          241 VTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTD  320 (349)
T ss_dssp             SCHHHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-
T ss_pred             CCChhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccc
Confidence            9954  778899999999999985432111  00         01 1111          13568889999999999764


Q ss_pred             eCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          276 IDPTGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       276 ~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                        ++++|+++++++||+. .++...+|+|+++
T Consensus       321 --i~~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          321 --VTAVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             --CCEEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             --cceEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence              5899999999999995 4455679999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=4.4e-47  Score=342.25  Aligned_cols=299  Identities=21%  Similarity=0.296  Sum_probs=251.1

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      ||++++++++++  ++++++|.|++++|||+|||.+++||++|++.+.|.++   ...+|.++|||++|+|+++|+++++
T Consensus         1 Mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2dq4_A            1 MRALAKLAPEEG--LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRR   78 (343)
T ss_dssp             CEEEEECSSSSS--CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CeEEEEeCCCCc--EEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCc
Confidence            899999998864  89999999999999999999999999999999988654   3568999999999999999999999


Q ss_pred             CCCCCEEEEec------------ccccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320           79 FNTGDEVYGNI------------QDFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF  141 (327)
Q Consensus        79 ~~~Gd~V~~~~------------~~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  141 (327)
                      +++||||++..            +..+.|.     +....|+|+||++++++.++++|+++++++|+++ ..+.|||+++
T Consensus        79 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l  157 (343)
T 2dq4_A           79 PQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHTV  157 (343)
T ss_dssp             SCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHHH
Confidence            99999998753            1233342     2235799999999999999999999999999877 4567899999


Q ss_pred             H-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCcc
Q 020320          142 K-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFD  214 (327)
Q Consensus       142 ~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d  214 (327)
                      . ..++ +|++|||+|+ |++|++++|+|+.+ |+ ++++++++++++++++++ +++++++++.++.+.+     +++|
T Consensus       158 ~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D  233 (343)
T 2dq4_A          158 YAGSGV-SGKSVLITGA-GPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVE  233 (343)
T ss_dssp             HSTTCC-TTSCEEEECC-SHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEE
T ss_pred             HHhCCC-CCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCC
Confidence            8 8899 9999999997 99999999999998 88 899999999999999999 9999988776665543     3799


Q ss_pred             EEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCC---c---------eeeEEeec-CHHHHHHHHhHHHCCCceeeeCC
Q 020320          215 VLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHP---R---------AIYSSLTV-SGEILEKLRPFIESGKLKAQIDP  278 (327)
Q Consensus       215 ~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~---~---------~~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~~  278 (327)
                      ++||++|..   ..++.+++++|+++.+|......   .         .+...... ..+.++++++++++|+++..+++
T Consensus       234 ~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~~~~~i  313 (343)
T 2dq4_A          234 VLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSPLL  313 (343)
T ss_dssp             EEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSCCGGGE
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCChHHhe
Confidence            999999863   67889999999999998643210   0         01111112 46789999999999998655556


Q ss_pred             CcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          279 TGPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       279 ~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      +++|+++++++||+.+.+++. +|+|+++.
T Consensus       314 ~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          314 THRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             EEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             eEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            789999999999999988877 99999863

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=4.5e-47  Score=344.86  Aligned_cols=299  Identities=18%  Similarity=0.222  Sum_probs=245.5

Q ss_pred             CceeEEecccCCCcceEEeeccCC--------CCCCCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEE
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLP--------TPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIV   69 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p--------~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V   69 (327)
                      |||+++++.++.   ++++++|.|        ++++|||||||.+++||++|++.+.+..   ....+|.++|||++|+|
T Consensus         8 ~mka~~~~~~~~---l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V   84 (363)
T 3m6i_A            8 TNIGVFTNPQHD---LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEV   84 (363)
T ss_dssp             CCEEEEECTTCC---EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEE
T ss_pred             cceeEEEeCCCc---EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEE
Confidence            689999998766   999999999        9999999999999999999999886322   23467999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEec------------ccccccCc------CCCCCceeeEEEeeccceecCCCCCCHHhhcccc
Q 020320           70 VAKGTSVTKFNTGDEVYGNI------------QDFNAEGK------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLP  131 (327)
Q Consensus        70 ~~vG~~v~~~~~Gd~V~~~~------------~~~~~~~~------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~  131 (327)
                      +++|++++++++||||++..            +.++.|..      ...+|+|+||+++++++++++|+ +++++|+++ 
T Consensus        85 ~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~-  162 (363)
T 3m6i_A           85 IAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML-  162 (363)
T ss_dssp             EEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH-
T ss_pred             EEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhh-
Confidence            99999999999999998753            12333321      23679999999999999999999 999999977 


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCC-----CC
Q 020320          132 LAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRK-----TK  205 (327)
Q Consensus       132 ~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~-----~~  205 (327)
                      .++.|||++++.+++++|++|||+|+ |++|++++|+||.+ |++ +++++.+++++++++++ ++.++++..     .+
T Consensus       163 ~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~  239 (363)
T 3m6i_A          163 EPLSVALAGLQRAGVRLGDPVLICGA-GPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEE  239 (363)
T ss_dssp             HHHHHHHHHHHHHTCCTTCCEEEECC-SHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHH
T ss_pred             hHHHHHHHHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-chhcccccccccchHH
Confidence            46789999998899999999999995 99999999999999 887 88888999999999999 766654321     22


Q ss_pred             hhhhc------cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHh
Q 020320          206 YEDIE------EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRP  265 (327)
Q Consensus       206 ~~~~~------~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~  265 (327)
                      +.+.+      +++|++||++|..   ..++.+++++|+++.+|.......           .+..... ..+.++++++
T Consensus       240 ~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~  318 (363)
T 3m6i_A          240 SAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYR-YCNTWPRAIR  318 (363)
T ss_dssp             HHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCS-CSSCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccC-CHHHHHHHHH
Confidence            32221      4799999999964   678999999999999986542211           1111111 2577999999


Q ss_pred             HHHCCCceeeeCCCcccchhhHHHHHHHHHhC-CCCceEEEEeC
Q 020320          266 FIESGKLKAQIDPTGPYKFKDVIEAFRYLETG-RARGKVVISAF  308 (327)
Q Consensus       266 l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~-~~~gk~vv~~~  308 (327)
                      ++++|++++.++++++|+++++++||+.+.++ ...+|++++..
T Consensus       319 l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  362 (363)
T 3m6i_A          319 LVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSL  362 (363)
T ss_dssp             HHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC
T ss_pred             HHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecC
Confidence            99999997766667999999999999999887 56789999875

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=1.2e-46  Score=351.47  Aligned_cols=308  Identities=25%  Similarity=0.360  Sum_probs=253.4

Q ss_pred             CceeEEecccC-------------CCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---------------
Q 020320            1 MQNAWYYEEYG-------------PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---------------   52 (327)
Q Consensus         1 ~~~~~v~~~~~-------------~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---------------   52 (327)
                      |||+++++.++             ..+.++++++|.|++++|||||||.+++||++|++...+..               
T Consensus        30 tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~  109 (456)
T 3krt_A           30 SYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSD  109 (456)
T ss_dssp             CEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCH
T ss_pred             ceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcccccc
Confidence            69999999872             22469999999999999999999999999999987643211               


Q ss_pred             --CCCCCC-CcccccccEEEEEeCCCCCCCCCCCEEEEecccc-----------cccC------cCCCCCceeeEEEeec
Q 020320           53 --FPSDFP-AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDF-----------NAEG------KLKQLGALAEFIVVEE  112 (327)
Q Consensus        53 --~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~-----------~~~~------~~~~~g~~~~~~~v~~  112 (327)
                        ....+| .++|||++|+|+++|++++++++||+|++.+..+           +.|.      .....|+|+||+++++
T Consensus       110 ~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~  189 (456)
T 3krt_A          110 LAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKS  189 (456)
T ss_dssp             HHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEG
T ss_pred             ccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEech
Confidence              012466 6899999999999999999999999999864322           1221      1123599999999999


Q ss_pred             cceecCCCCCCHHhhcccchHHHHHHHHHHh---cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          113 SLIAKKPKNISFEEAASLPLAVQTAIEGFKT---AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       113 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~---~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      ++++++|+++++++|++++.++.|||+++..   +++++|++|+|+|++|++|++++|+|+.+ |+++++++++++++++
T Consensus       190 ~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~  268 (456)
T 3krt_A          190 NQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEI  268 (456)
T ss_dssp             GGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHH
T ss_pred             HHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHH
Confidence            9999999999999999999899999999943   78999999999998899999999999998 9999999999999999


Q ss_pred             HHHcCCCEEEeCCCCChh-----------------hhc------cCccEEEeCCCC--chhhhhhhcCCCcEEEeeCCCC
Q 020320          190 VKELGADKVIDYRKTKYE-----------------DIE------EKFDVLYDTIGD--CKNSFVVAKDNAPIVDITWPPS  244 (327)
Q Consensus       190 ~~~~g~~~v~~~~~~~~~-----------------~~~------~~~d~v~d~~g~--~~~~~~~l~~~g~~v~~g~~~~  244 (327)
                      ++++|+++++++...++.                 +.+      +++|++||++|.  ...++.+++++|+++.+|....
T Consensus       269 ~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~  348 (456)
T 3krt_A          269 CRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSG  348 (456)
T ss_dssp             HHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTC
T ss_pred             HHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCC
Confidence            999999999988765431                 111      479999999995  3778899999999999986543


Q ss_pred             CCc------------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCCCC
Q 020320          245 HPR------------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYT  311 (327)
Q Consensus       245 ~~~------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~~~  311 (327)
                      ...            .+..+.....+.+.++++++++|++++.  ++++|+++++++||+.+.+++..||+|+.+.+..
T Consensus       349 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~eA~~~l~~~~~~GKvvv~~~~~~  425 (456)
T 3krt_A          349 YMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPT--LSKVYSLEDTGQAAYDVHRNLHQGKVGVLCLAPE  425 (456)
T ss_dssp             SEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCSSSEEEEESSCSS
T ss_pred             cccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCcccc--eeEEEcHHHHHHHHHHHHhCCCCCcEEEEeCCCC
Confidence            211            1112222345677889999999999864  4799999999999999999999999999887544

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=6.1e-47  Score=344.17  Aligned_cols=295  Identities=19%  Similarity=0.247  Sum_probs=244.0

Q ss_pred             CceeEEecccCCC-cceEEeeccCCCCC--CCeEEEEEEEEeeChHhHhhhcCCCCC-CCCC---------CcccccccE
Q 020320            1 MQNAWYYEEYGPK-EVLKLGDFPLPTPQ--HDQLLVQVRAAALNPIDSKRRQRPLFP-SDFP---------AVPGCDMAG   67 (327)
Q Consensus         1 ~~~~~v~~~~~~~-~~l~~~~~~~p~~~--~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p---------~~~G~e~~G   67 (327)
                      |||++++++++.+ +.+++++.|.|.++  +|||+|||.+++||++|++.+.|.++. ..+|         .++|||++|
T Consensus         3 ~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~G   82 (364)
T 1gu7_A            3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLF   82 (364)
T ss_dssp             EEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEE
T ss_pred             eEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeEE
Confidence            6999999998865 45899999888776  999999999999999999999887643 3456         899999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCC-----------CCCHHhhcccchHHHH
Q 020320           68 IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK-----------NISFEEAASLPLAVQT  136 (327)
Q Consensus        68 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~-----------~~~~~~aa~~~~~~~t  136 (327)
                      +|+++|++++++++||||++...         ..|+|+||++++++.++++|+           ++++++|++++.++.|
T Consensus        83 ~V~~vG~~v~~~~vGdrV~~~~~---------~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~t  153 (364)
T 1gu7_A           83 EVIKVGSNVSSLEAGDWVIPSHV---------NFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLT  153 (364)
T ss_dssp             EEEEECTTCCSCCTTCEEEESSS---------CCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHH
T ss_pred             EEEEeCCCCCcCCCCCEEEecCC---------CCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHH
Confidence            99999999999999999998642         369999999999999999998           8999999999999999


Q ss_pred             HHHHHHh-cCCCCC-CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc----HHHHHHcCCCEEEeCCC---CChh
Q 020320          137 AIEGFKT-AGFKTG-QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK----VEFVKELGADKVIDYRK---TKYE  207 (327)
Q Consensus       137 a~~~l~~-~~~~~~-~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~----~~~~~~~g~~~v~~~~~---~~~~  207 (327)
                      ||+++.+ .++++| ++|||+|++|++|++++|+||.+ |++++++++++++    .++++++|+++++++++   .++.
T Consensus       154 a~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~  232 (364)
T 1gu7_A          154 AYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFG  232 (364)
T ss_dssp             HHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGH
T ss_pred             HHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHH
Confidence            9999976 689999 99999998899999999999998 9998888876655    67789999999998653   3333


Q ss_pred             hh--------ccCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCCCCce----------ee-EEeecC----------
Q 020320          208 DI--------EEKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPSHPRA----------IY-SSLTVS----------  256 (327)
Q Consensus       208 ~~--------~~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~~~~----------~~-~~~~~~----------  256 (327)
                      +.        .+++|++||++|..  ..++.+++++|+++.+|.....+..          .. ......          
T Consensus       233 ~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  312 (364)
T 1gu7_A          233 PTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELK  312 (364)
T ss_dssp             HHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHH
T ss_pred             HHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccCHHHH
Confidence            22        23799999999953  5678999999999999865421111          00 011111          


Q ss_pred             HHHHHHHHhHHHCCCceeeeCCCcccch---hhHHHHHHHHHhCCCCceEEEEe
Q 020320          257 GEILEKLRPFIESGKLKAQIDPTGPYKF---KDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       257 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~---~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      .+.++++++++++|++++.+.  ..|++   +++++||+.+.+++..+|+|+++
T Consensus       313 ~~~~~~~~~l~~~g~l~~~~~--~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          313 TSTLNQIIAWYEEGKLTDAKS--IETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHHHHHHHHTCCCCCCC--EEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHHHHHHHHHcCCcccccc--eEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            356899999999999998643  45555   59999999999888889999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=4.8e-46  Score=337.58  Aligned_cols=294  Identities=24%  Similarity=0.369  Sum_probs=249.3

Q ss_pred             CceeEEecccCCC--cceEE-eeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCC
Q 020320            1 MQNAWYYEEYGPK--EVLKL-GDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSV   76 (327)
Q Consensus         1 ~~~~~v~~~~~~~--~~l~~-~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v   76 (327)
                      |||++++++++.+  +.+++ ++.|.|.+++|||||||.+++||++|++.+.|.++ ...+|.++|||++|+|+++|+++
T Consensus        23 ~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~~V  102 (362)
T 2c0c_A           23 MMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSA  102 (362)
T ss_dssp             EEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECTTG
T ss_pred             hceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECCCc
Confidence            5999999998863  46999 99999999999999999999999999999988764 24689999999999999999999


Q ss_pred             C-CCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEE
Q 020320           77 T-KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFI  154 (327)
Q Consensus        77 ~-~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI  154 (327)
                      + ++++||||++..           .|+|+||++++++.++++|++ + .+++.++.+++|||+++. .+++++|++|||
T Consensus       103 ~~~~~vGdrV~~~~-----------~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV  169 (362)
T 2c0c_A          103 SARYTVGQAVAYMA-----------PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLV  169 (362)
T ss_dssp             GGTCCTTCEEEEEC-----------SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEE
T ss_pred             cCCCCCCCEEEEcc-----------CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEE
Confidence            9 999999999873           599999999999999999986 3 456677888999999995 589999999999


Q ss_pred             EcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--hhhh
Q 020320          155 VGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--KNSF  227 (327)
Q Consensus       155 ~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--~~~~  227 (327)
                      +||+|++|++++++|+.+ |++++++++++++++.++++|++.+++.++.++.+.+     .++|++||++|..  ..++
T Consensus       170 ~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~  248 (362)
T 2c0c_A          170 TAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAV  248 (362)
T ss_dssp             TTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCTHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCHHHHHHHH
Confidence            999999999999999998 9999988999999999999999999988776665433     3799999999853  6788


Q ss_pred             hhhcCCCcEEEeeCCCCC------------Cc---------eeeEEee--c---CHHHHHHHHhHHHCCCceeeeC----
Q 020320          228 VVAKDNAPIVDITWPPSH------------PR---------AIYSSLT--V---SGEILEKLRPFIESGKLKAQID----  277 (327)
Q Consensus       228 ~~l~~~g~~v~~g~~~~~------------~~---------~~~~~~~--~---~~~~~~~~~~l~~~g~~~~~~~----  277 (327)
                      .+++++|+++.+|.....            ..         .+.....  .   ..+.++++++++++|++++...    
T Consensus       249 ~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  328 (362)
T 2c0c_A          249 DALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDL  328 (362)
T ss_dssp             HHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTT
T ss_pred             HHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccc
Confidence            999999999999854311            00         0111110  0   2467899999999999987654    


Q ss_pred             --CCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          278 --PTGPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       278 --~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                        .++.|+++++++||+.+.+++..+|+|+.+.
T Consensus       329 ~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  361 (362)
T 2c0c_A          329 SPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP  361 (362)
T ss_dssp             STTCSCBSTTHHHHHHHHHHTTCCSBEEEEECC
T ss_pred             cccccccCHHHHHHHHHHHHcCCCCceEEEEcC
Confidence              4567899999999999998888899999875

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=5.6e-47  Score=348.08  Aligned_cols=301  Identities=19%  Similarity=0.242  Sum_probs=249.4

Q ss_pred             CceeEEecccCCCcceEEeeccCCCC-CC-----CeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTP-QH-----DQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGT   74 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~-~~-----~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~   74 (327)
                      |||+++++.++.   ++++++|.|.+ ++     +||||||.+++||++|++.+.|.+ ...+|.++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~~~~---l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~-~~~~p~v~GhE~~G~V~~vG~   77 (398)
T 2dph_A            2 GNKSVVYHGTRD---LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF-IVPKGHVLGHEITGEVVEKGS   77 (398)
T ss_dssp             CEEEEEEEETTE---EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS-CCCTTCBCCCCEEEEEEEECT
T ss_pred             ccEEEEEEcCCC---EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC-CCCCCcccCCceEEEEEEECC
Confidence            799999998765   99999999987 68     999999999999999999998864 346799999999999999999


Q ss_pred             CCCCCCCCCEEEEec------------ccccccCc----------------CCCCCceeeEEEeecc--ceecCCCCCCH
Q 020320           75 SVTKFNTGDEVYGNI------------QDFNAEGK----------------LKQLGALAEFIVVEES--LIAKKPKNISF  124 (327)
Q Consensus        75 ~v~~~~~Gd~V~~~~------------~~~~~~~~----------------~~~~g~~~~~~~v~~~--~~~~~p~~~~~  124 (327)
                      +++++++||||++..            +..+.|..                ....|+|+||++++++  .++++|+++++
T Consensus        78 ~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~  157 (398)
T 2dph_A           78 DVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQA  157 (398)
T ss_dssp             TCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHH
T ss_pred             CCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCCh
Confidence            999999999998642            12333332                1246999999999986  89999999999


Q ss_pred             Hh----hcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEE
Q 020320          125 EE----AASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVI  199 (327)
Q Consensus       125 ~~----aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~  199 (327)
                      ++    |+.++.++.|||++++.+++++|++|||+| +|++|++++|+||.+ |+ ++++++++++++++++++|++ ++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~-~i  234 (398)
T 2dph_A          158 MEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAG-AGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSDAGFE-TI  234 (398)
T ss_dssp             HHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHTTTCE-EE
T ss_pred             hhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCc-EE
Confidence            88    888888999999999889999999999999 699999999999998 88 788888999999999999996 78


Q ss_pred             eCCCCCh-hhhc------cCccEEEeCCCC-----------------chhhhhhhcCCCcEEEeeCCCC-----------
Q 020320          200 DYRKTKY-EDIE------EKFDVLYDTIGD-----------------CKNSFVVAKDNAPIVDITWPPS-----------  244 (327)
Q Consensus       200 ~~~~~~~-~~~~------~~~d~v~d~~g~-----------------~~~~~~~l~~~g~~v~~g~~~~-----------  244 (327)
                      ++++.++ .+.+      +++|++||++|.                 ...++.+++++|+++.+|....           
T Consensus       235 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~  314 (398)
T 2dph_A          235 DLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAG  314 (398)
T ss_dssp             ETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHH
T ss_pred             cCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccccccccccccc
Confidence            8776654 4322      279999999984                 3577899999999999986521           


Q ss_pred             -CCceee------------EEeecCHHHHHHHHhHHHCCCce--eeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320          245 -HPRAIY------------SSLTVSGEILEKLRPFIESGKLK--AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFP  309 (327)
Q Consensus       245 -~~~~~~------------~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~  309 (327)
                       .+..+.            .......+.++++++++++|+++  +.++++++|+++++++||+.+.+++. +|+|+.+..
T Consensus       315 ~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvv~~~~  393 (398)
T 2dph_A          315 SGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP-AKFVIDPHG  393 (398)
T ss_dssp             TTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCS-CEEEECTTS
T ss_pred             CCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCc-eEEEEecCc
Confidence             100100            00111346789999999999998  75556799999999999999988887 999998854

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=2.3e-46  Score=349.13  Aligned_cols=309  Identities=27%  Similarity=0.368  Sum_probs=251.8

Q ss_pred             CceeEEecccC-----------CCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhc----------------CCCC
Q 020320            1 MQNAWYYEEYG-----------PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ----------------RPLF   53 (327)
Q Consensus         1 ~~~~~v~~~~~-----------~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~----------------~~~~   53 (327)
                      |||+++++.++           ..+.++++++|.|++++|||+|||.+++||++|++...                +.+.
T Consensus        24 tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~  103 (447)
T 4a0s_A           24 TYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWA  103 (447)
T ss_dssp             EEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGG
T ss_pred             hheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCccc
Confidence            69999999987           11359999999999999999999999999999985422                2111


Q ss_pred             -CCCCC-CcccccccEEEEEeCCCCCCCCCCCEEEEeccc-----------ccccC-----c-CCCCCceeeEEEeeccc
Q 020320           54 -PSDFP-AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQD-----------FNAEG-----K-LKQLGALAEFIVVEESL  114 (327)
Q Consensus        54 -~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-----------~~~~~-----~-~~~~g~~~~~~~v~~~~  114 (327)
                       ...+| .++|||++|+|+++|++|+++++||||++.+..           .+.|.     + ....|+|+||+++++++
T Consensus       104 ~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~  183 (447)
T 4a0s_A          104 TRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQ  183 (447)
T ss_dssp             GGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGGG
T ss_pred             cccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHHH
Confidence             12456 699999999999999999999999999975421           11221     1 12259999999999999


Q ss_pred             eecCCCCCCHHhhcccchHHHHHHHHHH---hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH
Q 020320          115 IAKKPKNISFEEAASLPLAVQTAIEGFK---TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK  191 (327)
Q Consensus       115 ~~~~p~~~~~~~aa~~~~~~~ta~~~l~---~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~  191 (327)
                      ++++|+++++++|++++.++.|||+++.   .+++++|++|||+|++|++|++++|+|+++ |+++++++++++++++++
T Consensus       184 ~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~  262 (447)
T 4a0s_A          184 LLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVR  262 (447)
T ss_dssp             EEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH
T ss_pred             cEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence            9999999999999999999999999993   489999999999998899999999999998 999999999999999999


Q ss_pred             HcCCCEEEeCCCCCh------------------hhh-----ccCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCCCC
Q 020320          192 ELGADKVIDYRKTKY------------------EDI-----EEKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPSHP  246 (327)
Q Consensus       192 ~~g~~~v~~~~~~~~------------------~~~-----~~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~~  246 (327)
                      ++|++++++..+.++                  .+.     .+++|++||++|..  ..++.+++++|+++.+|......
T Consensus       263 ~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~  342 (447)
T 4a0s_A          263 ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYL  342 (447)
T ss_dssp             HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTCSE
T ss_pred             hcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCCcc
Confidence            999999987544321                  111     14799999999953  67889999999999998654221


Q ss_pred             c------------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 020320          247 R------------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYTE  312 (327)
Q Consensus       247 ~------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~~~~  312 (327)
                      .            .+........+.+.++++++++|++++.  ++++|+++++++||+.+.+++..||+++.+.+...
T Consensus       343 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~~~~~~  418 (447)
T 4a0s_A          343 HTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPA--MSAVYPLAEAAEACRVVQTSRQVGKVAVLCMAPEQ  418 (447)
T ss_dssp             EEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCCSSEEEEESSCCST
T ss_pred             cccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCcccc--eeEEEcHHHHHHHHHHHhcCCCceEEEEEeCCCCC
Confidence            1            1122223345778899999999999864  47999999999999999999999999999876654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.3e-46  Score=342.39  Aligned_cols=302  Identities=20%  Similarity=0.223  Sum_probs=245.8

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCC-CCe------EEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQ-HDQ------LLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKG   73 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~-~~e------VlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG   73 (327)
                      |||+++++.++.   ++++++|.|+++ ++|      |||||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|
T Consensus         2 ~Mka~~~~~~~~---l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG   77 (398)
T 1kol_A            2 GNRGVVYLGSGK---VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKG   77 (398)
T ss_dssp             CEEEEEEEETTE---EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEEC
T ss_pred             ccEEEEEecCCc---eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEEC
Confidence            799999998764   999999999997 898      99999999999999999988653 3578999999999999999


Q ss_pred             CCCCCCCCCCEEEEec------------ccccccCcC---------------CCCCceeeEEEeecc--ceecCCCCCCH
Q 020320           74 TSVTKFNTGDEVYGNI------------QDFNAEGKL---------------KQLGALAEFIVVEES--LIAKKPKNISF  124 (327)
Q Consensus        74 ~~v~~~~~Gd~V~~~~------------~~~~~~~~~---------------~~~g~~~~~~~v~~~--~~~~~p~~~~~  124 (327)
                      ++++++++||||+...            +..+.|...               ...|+|+||+++++.  +++++|+++++
T Consensus        78 ~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~  157 (398)
T 1kol_A           78 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA  157 (398)
T ss_dssp             TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred             CCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcch
Confidence            9999999999998531            123334321               246999999999986  89999999998


Q ss_pred             Hh----hcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEE
Q 020320          125 EE----AASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVI  199 (327)
Q Consensus       125 ~~----aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~  199 (327)
                      ++    ++.++.++.|||++++.+++++|++|||+| +|++|++++|+||.+ |+ ++++++.+++|+++++++|++ ++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~a~~lGa~-~i  234 (398)
T 1kol_A          158 MEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAG-AGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAKAQGFE-IA  234 (398)
T ss_dssp             HHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCE-EE
T ss_pred             hhhcccccccccHHHHHHHHHHHcCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHcCCc-EE
Confidence            87    778888999999999989999999999999 799999999999998 88 577777899999999999997 67


Q ss_pred             eCCCCC-hhhhc------cCccEEEeCCCC------------------chhhhhhhcCCCcEEEeeCCC-CCC-------
Q 020320          200 DYRKTK-YEDIE------EKFDVLYDTIGD------------------CKNSFVVAKDNAPIVDITWPP-SHP-------  246 (327)
Q Consensus       200 ~~~~~~-~~~~~------~~~d~v~d~~g~------------------~~~~~~~l~~~g~~v~~g~~~-~~~-------  246 (327)
                      ++++.+ +.+.+      +++|++||++|.                  ...++.+++++|+++.+|... ..+       
T Consensus       235 ~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~  314 (398)
T 1kol_A          235 DLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAA  314 (398)
T ss_dssp             ETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHH
T ss_pred             ccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCccccccccc
Confidence            765543 43322      379999999984                  257789999999999998651 110       


Q ss_pred             ----cee----------eEE--eecCHHHHHHHHhHHHCCCce-eeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320          247 ----RAI----------YSS--LTVSGEILEKLRPFIESGKLK-AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFP  309 (327)
Q Consensus       247 ----~~~----------~~~--~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~  309 (327)
                          ..+          ...  .....+.++++++++++|+++ +..+++++|+++++++||+.+.+++. +|+|+++..
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvi~~~~  393 (398)
T 1kol_A          315 KIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVP-KKFVIDPHK  393 (398)
T ss_dssp             HTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCS-CEEEECTTC
T ss_pred             ccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCc-eEEEEEeCC
Confidence                000          000  111246688999999999998 33345789999999999999988887 999998854


Q ss_pred             C
Q 020320          310 Y  310 (327)
Q Consensus       310 ~  310 (327)
                      .
T Consensus       394 ~  394 (398)
T 1kol_A          394 T  394 (398)
T ss_dssp             S
T ss_pred             c
Confidence            3

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=1.2e-45  Score=339.68  Aligned_cols=306  Identities=20%  Similarity=0.270  Sum_probs=250.9

Q ss_pred             CceeEEecccCCCc-------------------------ceEEeeccCCC-CCCCeEEEEEEEEeeChHhHhhhcCCC--
Q 020320            1 MQNAWYYEEYGPKE-------------------------VLKLGDFPLPT-PQHDQLLVQVRAAALNPIDSKRRQRPL--   52 (327)
Q Consensus         1 ~~~~~v~~~~~~~~-------------------------~l~~~~~~~p~-~~~~eVlV~v~~~~i~~~d~~~~~~~~--   52 (327)
                      +||+++++++++++                         .++++++|.|. +++|||||||.+++||++|++.+.+..  
T Consensus         2 ~m~a~~~~~~~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~   81 (404)
T 3ip1_A            2 SLRAVRLHAKWDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEG   81 (404)
T ss_dssp             CEEEEEEEEEECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTS
T ss_pred             cceEEEecCCCCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCc
Confidence            58999999887776                         78999999999 999999999999999999999987642  


Q ss_pred             -----CCCCCCCcccccccEEEEEeCCCC------CCCCCCCEEEEecc------------cccccC-----cCCCCCce
Q 020320           53 -----FPSDFPAVPGCDMAGIVVAKGTSV------TKFNTGDEVYGNIQ------------DFNAEG-----KLKQLGAL  104 (327)
Q Consensus        53 -----~~~~~p~~~G~e~~G~V~~vG~~v------~~~~~Gd~V~~~~~------------~~~~~~-----~~~~~g~~  104 (327)
                           ....+|.++|||++|+|+++|+++      +++++||||++...            ..+.|.     +....|+|
T Consensus        82 ~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~  161 (404)
T 3ip1_A           82 YILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAF  161 (404)
T ss_dssp             BBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSS
T ss_pred             cccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCC
Confidence                 124679999999999999999999      89999999997531            223332     23468999


Q ss_pred             eeEEEeeccceecCCCCCC------HHhhcccchHHHHHHHHHH-h-cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-
Q 020320          105 AEFIVVEESLIAKKPKNIS------FEEAASLPLAVQTAIEGFK-T-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-  175 (327)
Q Consensus       105 ~~~~~v~~~~~~~~p~~~~------~~~aa~~~~~~~ta~~~l~-~-~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-  175 (327)
                      +||++++++.++++|++++      +.+++.++.++.|||+++. . +++++|++|||+|+ |++|++++|+||.+ |+ 
T Consensus       162 aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~-Ga~  239 (404)
T 3ip1_A          162 AEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHA-GAS  239 (404)
T ss_dssp             BSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHT-TCS
T ss_pred             cceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCC
Confidence            9999999999999999875      4567788889999999995 3 58999999999995 99999999999998 88 


Q ss_pred             cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc----hhhhhhh----cCCCcEEEeeC
Q 020320          176 SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC----KNSFVVA----KDNAPIVDITW  241 (327)
Q Consensus       176 ~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~----~~~~~~l----~~~g~~v~~g~  241 (327)
                      ++++++.+++++++++++|+++++++++.++.+.+      +++|++||++|..    ..+..++    +++|+++.+|.
T Consensus       240 ~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~  319 (404)
T 3ip1_A          240 KVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR  319 (404)
T ss_dssp             EEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence            77777789999999999999999998877766543      3799999999965    3455667    99999999987


Q ss_pred             CCCCCc-----------eeeEEee-cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320          242 PPSHPR-----------AIYSSLT-VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFP  309 (327)
Q Consensus       242 ~~~~~~-----------~~~~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~  309 (327)
                      ......           .+..... ...+.++++++++++| +++.++++++|+++++++||+.+.    .||+|+++.+
T Consensus       320 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~~  394 (404)
T 3ip1_A          320 ADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVTM  394 (404)
T ss_dssp             CCSCEEECHHHHHHTTCEEEECCCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEEE
T ss_pred             CCCCCcccHHHHhccceEEEEecCCCchHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecCC
Confidence            542210           1111111 1257899999999999 887667789999999999999886    5789988876


Q ss_pred             CCCc
Q 020320          310 YTES  313 (327)
Q Consensus       310 ~~~~  313 (327)
                      .++.
T Consensus       395 ~~~~  398 (404)
T 3ip1_A          395 LNEG  398 (404)
T ss_dssp             ECC-
T ss_pred             CCCc
Confidence            6543

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.2e-46  Score=338.35  Aligned_cols=293  Identities=19%  Similarity=0.180  Sum_probs=242.3

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCC---CCcccccccEEEEEeCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDF---PAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~---p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      ||++++++++.  .++++++|.|++++|||||||.+++||++|++.+.|.++...+   |.++|||++| |+++|++ ++
T Consensus         1 MkA~~~~~~~~--~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~   76 (357)
T 2b5w_A            1 MKAIAVKRGED--RPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TE   76 (357)
T ss_dssp             CEEEEEETTCS--SCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SS
T ss_pred             CeEEEEeCCCC--ceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CC
Confidence            89999998876  3899999999999999999999999999999999886654456   8999999999 9999999 99


Q ss_pred             CCCCCEEEEec------c--------cccccCc-------C-CCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHH
Q 020320           79 FNTGDEVYGNI------Q--------DFNAEGK-------L-KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQT  136 (327)
Q Consensus        79 ~~~Gd~V~~~~------~--------~~~~~~~-------~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  136 (327)
                      +++||||++..      +        ..+.|..       . ..+|+|+||++++++.++++|++++ +.| .++.++.|
T Consensus        77 ~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~a-al~~~~~t  154 (357)
T 2b5w_A           77 LEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELG-FLIEPISI  154 (357)
T ss_dssp             CCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TTG-GGHHHHHH
T ss_pred             CCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hhh-hhhchHHH
Confidence            99999999762      2        1233321       1 2369999999999999999999999 554 57788999


Q ss_pred             HHHHHHhcCCCCC------CEEEEEcCCchHHHHH-HHHH-HhhcCCc-EEEEeCCcc---cHHHHHHcCCCEEEeCCCC
Q 020320          137 AIEGFKTAGFKTG------QTIFIVGGAGGVGTLV-IQLA-KHFYGAS-HVVATTSTP---KVEFVKELGADKVIDYRKT  204 (327)
Q Consensus       137 a~~~l~~~~~~~~------~~vlI~ga~g~~G~~a-~~la-~~~~g~~-~v~~~~~~~---~~~~~~~~g~~~v~~~~~~  204 (327)
                      ||++++.+++++|      ++|||+|+ |++|+++ +|+| |.+ |++ +++++++++   ++++++++|++++ ++++.
T Consensus       155 a~~al~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~~  231 (357)
T 2b5w_A          155 TEKALEHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQT  231 (357)
T ss_dssp             HHHHHHHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTTS
T ss_pred             HHHHHHhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCcc
Confidence            9999988888999      99999996 9999999 9999 988 887 888888888   9999999999999 87766


Q ss_pred             Chhhhc----cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC-CC-Cc--------------eeeEEeecCHHHHH
Q 020320          205 KYEDIE----EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP-SH-PR--------------AIYSSLTVSGEILE  261 (327)
Q Consensus       205 ~~~~~~----~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~-~~-~~--------------~~~~~~~~~~~~~~  261 (327)
                      ++.+ +    .++|++||++|..   ..++++++++|+++.+|... .. ..              .+........+.++
T Consensus       232 ~~~~-i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  310 (357)
T 2b5w_A          232 PVED-VPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFE  310 (357)
T ss_dssp             CGGG-HHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCHHHHH
T ss_pred             CHHH-HHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCHHHHH
Confidence            6544 2    2799999999953   67889999999999998654 11 10              01111223468899


Q ss_pred             HHHhHHHCC--Cc-eeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320          262 KLRPFIESG--KL-KAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFP  309 (327)
Q Consensus       262 ~~~~l~~~g--~~-~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~  309 (327)
                      ++++++++|  ++ ++  .++++|+++++++||+.+   ...+|+|+.+.+
T Consensus       311 ~~~~l~~~g~~~~~~~--~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          311 AATVTFTKLPKWFLED--LVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             HHHHHHHHSCHHHHHH--HEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             HHHHHHHhCchhhhhh--hcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence            999999999  84 44  346899999999999988   456899998854

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2.2e-44  Score=323.85  Aligned_cols=288  Identities=22%  Similarity=0.280  Sum_probs=242.4

Q ss_pred             CceeEEecc--cC--CCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCccccc----ccEEEEEe
Q 020320            1 MQNAWYYEE--YG--PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCD----MAGIVVAK   72 (327)
Q Consensus         1 ~~~~~v~~~--~~--~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e----~~G~V~~v   72 (327)
                      |||+|++++  +|  .++.+++.+.|.|++++|||||||.+++||++|++.+.+. ....+|.++|||    ++|+|++.
T Consensus         7 ~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~-~~~~~p~~~G~e~g~~~~G~V~~~   85 (336)
T 4b7c_A            7 INRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDA-RSYIPPVGIGEVMRALGVGKVLVS   85 (336)
T ss_dssp             EEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCS-CCSSCCCCTTSBCCCEEEEEEEEE
T ss_pred             cccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcc-cccCCCCCCCcccCCceEEEEEec
Confidence            589999986  23  3467999999999999999999999999999999888664 233567888888    79999994


Q ss_pred             CCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhh--cccchHHHHHHHHH-HhcCCCCC
Q 020320           73 GTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEA--ASLPLAVQTAIEGF-KTAGFKTG  149 (327)
Q Consensus        73 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a--a~~~~~~~ta~~~l-~~~~~~~~  149 (327)
                        +++++++||||++.             |+|+||++++++.++++|+++++.++  +.++.++.|||+++ +.+++++|
T Consensus        86 --~v~~~~vGdrV~~~-------------G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g  150 (336)
T 4b7c_A           86 --KHPGFQAGDYVNGA-------------LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNG  150 (336)
T ss_dssp             --CSTTCCTTCEEEEE-------------CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTT
T ss_pred             --CCCCCCCCCEEecc-------------CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCC
Confidence              58899999999974             78999999999999999999977776  67899999999999 67999999


Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCC-
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD-  222 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~-  222 (327)
                      ++|||+|++|++|++++++++.. |++++++++++++.+.+ +++|++++++..+.++.+..     +++|++||++|. 
T Consensus       151 ~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  229 (336)
T 4b7c_A          151 ETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGE  229 (336)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCcc
Confidence            99999998899999999999998 99999999999999999 89999999998877766543     479999999994 


Q ss_pred             -chhhhhhhcCCCcEEEeeCCCC--------CCc----------eeeEEeecC-----HHHHHHHHhHHHCCCceeeeCC
Q 020320          223 -CKNSFVVAKDNAPIVDITWPPS--------HPR----------AIYSSLTVS-----GEILEKLRPFIESGKLKAQIDP  278 (327)
Q Consensus       223 -~~~~~~~l~~~g~~v~~g~~~~--------~~~----------~~~~~~~~~-----~~~~~~~~~l~~~g~~~~~~~~  278 (327)
                       ...++.+++++|+++.+|....        .+.          .+.......     .+.++++++++++|++++.+  
T Consensus       230 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--  307 (336)
T 4b7c_A          230 ILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSRE--  307 (336)
T ss_dssp             HHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCE--
T ss_pred             hHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccce--
Confidence             3778899999999999875431        011          111111111     37789999999999999865  


Q ss_pred             CcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          279 TGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       279 ~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                      ...|+++++++||+.+.+++..||+|+++
T Consensus       308 ~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          308 DIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             EEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             eeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            34589999999999999999999999974

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.4e-44  Score=320.24  Aligned_cols=296  Identities=18%  Similarity=0.284  Sum_probs=239.6

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||++++++++.+..+++++.|.|++++|||+|||.+++||++|++.+.|.++ ...+|.++|||++|+|+++  +++++
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~   80 (328)
T 1xa0_A            3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRF   80 (328)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSC
T ss_pred             cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCC
Confidence            59999999988655689999999999999999999999999999999887543 2357999999999999995  56889


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH---HhcCCCCCC-EEEEE
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF---KTAGFKTGQ-TIFIV  155 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l---~~~~~~~~~-~vlI~  155 (327)
                      ++||||++....    .+....|+|+||++++++.++++|+++++++|++++.++.|+|.++   .+.++++|+ +|||+
T Consensus        81 ~vGdrV~~~~~~----~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~  156 (328)
T 1xa0_A           81 REGDEVIATGYE----IGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVT  156 (328)
T ss_dssp             CTTCEEEEESTT----BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEES
T ss_pred             CCCCEEEEcccc----CCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEe
Confidence            999999986321    0112469999999999999999999999999999998888999876   357889997 99999


Q ss_pred             cCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC--hhhhc--cCccEEEeCCCCc--hhhhhh
Q 020320          156 GGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK--YEDIE--EKFDVLYDTIGDC--KNSFVV  229 (327)
Q Consensus       156 ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~--~~~d~v~d~~g~~--~~~~~~  229 (327)
                      |++|++|++++|+|+.+ |+++++++++++++++++++|++++++.++.+  .....  .++|++||++|..  ..++.+
T Consensus       157 Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  235 (328)
T 1xa0_A          157 GATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSR  235 (328)
T ss_dssp             STTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTTTHHHHHHT
T ss_pred             cCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHHHHHHHHHh
Confidence            98899999999999998 89999999999999999999999999876532  11111  4799999999853  778899


Q ss_pred             hcCCCcEEEeeCCCCCC--c----------eeeEEe--ecC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHH
Q 020320          230 AKDNAPIVDITWPPSHP--R----------AIYSSL--TVS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAF  291 (327)
Q Consensus       230 l~~~g~~v~~g~~~~~~--~----------~~~~~~--~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~  291 (327)
                      ++++|+++.+|.....+  .          .+....  ...    .+.++.+++++++| +++.   +++|+++++++||
T Consensus       236 l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~~---~~~~~l~~~~~A~  311 (328)
T 1xa0_A          236 MRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LERI---AQEISLAELPQAL  311 (328)
T ss_dssp             EEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHHH---EEEEEGGGHHHHH
T ss_pred             hccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Ccee---eeEeCHHHHHHHH
Confidence            99999999998643211  0          111110  111    24567777777778 7652   5899999999999


Q ss_pred             HHHHhCCCCceEEEEe
Q 020320          292 RYLETGRARGKVVISA  307 (327)
Q Consensus       292 ~~~~~~~~~gk~vv~~  307 (327)
                      +.+.+++..+|+|+++
T Consensus       312 ~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          312 KRILRGELRGRTVVRL  327 (328)
T ss_dssp             HHHHHTCCCSEEEEEC
T ss_pred             HHHHcCCCCCeEEEEe
Confidence            9999988889999986

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.8e-44  Score=323.59  Aligned_cols=298  Identities=18%  Similarity=0.276  Sum_probs=241.9

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||++++++++.++.+++++.|.|++++|||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++  +++++
T Consensus         4 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~~~   81 (330)
T 1tt7_A            4 LFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDPRF   81 (330)
T ss_dssp             EEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SSTTC
T ss_pred             cceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCCCC
Confidence            589999999885555999999999999999999999999999999998886532 357999999999999996  46889


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH---HhcCCCCCC-EEEEE
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF---KTAGFKTGQ-TIFIV  155 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l---~~~~~~~~~-~vlI~  155 (327)
                      ++||||++....    .+....|+|+||++++++.++++|+++++++|++++.++.|+|.++   .+.++++|+ +|||+
T Consensus        82 ~vGdrV~~~~~~----~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~  157 (330)
T 1tt7_A           82 AEGDEVIATSYE----LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVT  157 (330)
T ss_dssp             CTTCEEEEESTT----BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEE
T ss_pred             CCCCEEEEcccc----cCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEE
Confidence            999999986421    1123479999999999999999999999999999998888999876   357889996 99999


Q ss_pred             cCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC--hhhh--ccCccEEEeCCCCc--hhhhhh
Q 020320          156 GGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK--YEDI--EEKFDVLYDTIGDC--KNSFVV  229 (327)
Q Consensus       156 ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~--~~~~d~v~d~~g~~--~~~~~~  229 (327)
                      |++|++|++++|+|+.+ |+++++++++++++++++++|++++++.++.+  ....  ..++|++||++|..  ..++.+
T Consensus       158 Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  236 (330)
T 1tt7_A          158 GATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSK  236 (330)
T ss_dssp             STTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTHHHHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcHHHHHHHHHh
Confidence            98899999999999999 89999999999999999999999998754321  1111  13799999999863  678899


Q ss_pred             hcCCCcEEEeeCCCCCCc------------eeeEEe--ecC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHH
Q 020320          230 AKDNAPIVDITWPPSHPR------------AIYSSL--TVS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAF  291 (327)
Q Consensus       230 l~~~g~~v~~g~~~~~~~------------~~~~~~--~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~  291 (327)
                      ++++|+++.+|.....+.            .+....  ...    .+.++.+++++++|++++.  ++++|+++++++||
T Consensus       237 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--i~~~~~l~~~~~A~  314 (330)
T 1tt7_A          237 IQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTI--VDREVSLEETPGAL  314 (330)
T ss_dssp             EEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTS--EEEEECSTTHHHHH
T ss_pred             hcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCcccc--cceEEcHHHHHHHH
Confidence            999999999986542111            111110  111    2456777778888888653  36899999999999


Q ss_pred             HHHHhCCCCceEEEEe
Q 020320          292 RYLETGRARGKVVISA  307 (327)
Q Consensus       292 ~~~~~~~~~gk~vv~~  307 (327)
                      +.+.+++..+|+|+++
T Consensus       315 ~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          315 KDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HHTTTTCCSSEEEECC
T ss_pred             HHHHcCCCCCeEEEeC
Confidence            9998888889999863

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.3e-43  Score=321.29  Aligned_cols=293  Identities=19%  Similarity=0.267  Sum_probs=243.8

Q ss_pred             CceeEEe-ccc---CCC--cceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcC----CCC-CCCCCCcccccccEE
Q 020320            1 MQNAWYY-EEY---GPK--EVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQR----PLF-PSDFPAVPGCDMAGI   68 (327)
Q Consensus         1 ~~~~~v~-~~~---~~~--~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~----~~~-~~~~p~~~G~e~~G~   68 (327)
                      |||++++ +.+   |.+  +.+++++.|.|.+ ++|||||||.+++||++|++.+.+    .+. ...+|.++|||++|+
T Consensus         8 ~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~~G~   87 (357)
T 2zb4_A            8 IVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGI   87 (357)
T ss_dssp             EEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEEEEE
T ss_pred             cceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccEEEE
Confidence            5899999 666   554  6799999999998 999999999999999999987765    232 345789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCC-----CHHhhcccchHHHHHHHHH-H
Q 020320           69 VVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNI-----SFEEAASLPLAVQTAIEGF-K  142 (327)
Q Consensus        69 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~-----~~~~aa~~~~~~~ta~~~l-~  142 (327)
                      |++  ++++++++||||++..            |+|+||++++++.++++|+++     +++ ++.++.++.|||+++ +
T Consensus        88 V~~--~~v~~~~vGdrV~~~~------------G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~  152 (357)
T 2zb4_A           88 IEE--SKHTNLTKGDFVTSFY------------WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQE  152 (357)
T ss_dssp             EEE--ECSTTCCTTCEEEEEE------------EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHH
T ss_pred             EEe--cCCCCCCCCCEEEecC------------CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHH
Confidence            999  8899999999999863            789999999999999999998     555 667888999999999 6


Q ss_pred             hcCCCCC--CEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhhhc-----cCc
Q 020320          143 TAGFKTG--QTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKE-LGADKVIDYRKTKYEDIE-----EKF  213 (327)
Q Consensus       143 ~~~~~~~--~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~-----~~~  213 (327)
                      .+++++|  ++|||+|++|++|++++++++.. |+ +++++++++++.+.+++ +|++++++..+.++.+..     .++
T Consensus       153 ~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~  231 (357)
T 2zb4_A          153 KGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGV  231 (357)
T ss_dssp             HSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred             hcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCC
Confidence            7999999  99999998899999999999998 88 88888899889888876 999999988776655433     269


Q ss_pred             cEEEeCCCC--chhhhhhhcCCCcEEEeeCCCC----CCc-----------------eeeEEeec-----CHHHHHHHHh
Q 020320          214 DVLYDTIGD--CKNSFVVAKDNAPIVDITWPPS----HPR-----------------AIYSSLTV-----SGEILEKLRP  265 (327)
Q Consensus       214 d~v~d~~g~--~~~~~~~l~~~g~~v~~g~~~~----~~~-----------------~~~~~~~~-----~~~~~~~~~~  265 (327)
                      |++||++|.  ...++.+++++|+++.+|....    .+.                 .+......     ..+.++++++
T Consensus       232 d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  311 (357)
T 2zb4_A          232 DVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQ  311 (357)
T ss_dssp             EEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHH
T ss_pred             CEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHH
Confidence            999999994  3678899999999999875321    110                 01111111     1567899999


Q ss_pred             HHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCCCC
Q 020320          266 FIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYT  311 (327)
Q Consensus       266 l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~~~  311 (327)
                      ++++|++++.+  ...|+++++++||+.+.+++..+|+|+++.+.+
T Consensus       312 l~~~g~l~~~~--~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~~  355 (357)
T 2zb4_A          312 WFKEGKLKIKE--TVINGLENMGAAFQSMMTGGNIGKQIVCISEEI  355 (357)
T ss_dssp             HHHTTCCCCCE--EEEECGGGHHHHHHHHHTTCCSBEEEEECCCCC
T ss_pred             HHHcCCCcCcc--ceecCHHHHHHHHHHHHcCCCCceEEEEEeccc
Confidence            99999998764  356999999999999998888899999986543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1e-43  Score=314.88  Aligned_cols=278  Identities=24%  Similarity=0.373  Sum_probs=234.5

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++++++.+.  .+++.|.|++++|||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+          
T Consensus         1 Mka~~~~~~g~~~--~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~----------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPL--ELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE----------   68 (302)
T ss_dssp             CEEEEECSTTSCE--EEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET----------
T ss_pred             CeEEEEcCCCCch--heEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE----------
Confidence            8999999998763  35599999999999999999999999999999887643 3679999999999998          


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g  159 (327)
                       ||||++..          .+|+|+||++++++.++++|+++++++|+.++.++.|||+++. .. +++|++|+|+|++|
T Consensus        69 -GdrV~~~~----------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G  136 (302)
T 1iz0_A           69 -GRRYAALV----------PQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAG  136 (302)
T ss_dssp             -TEEEEEEC----------SSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTB
T ss_pred             -CcEEEEec----------CCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCc
Confidence             99999875          3699999999999999999999999999999999999999996 56 99999999999889


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC-CChhhhccCccEEEeCCCC--chhhhhhhcCCCcE
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK-TKYEDIEEKFDVLYDTIGD--CKNSFVVAKDNAPI  236 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~d~v~d~~g~--~~~~~~~l~~~g~~  236 (327)
                      ++|++++++|+.+ |++++++++++++++.++++|++++++.++ .++.+..+++|++|| +|.  ...++.+++++|++
T Consensus       137 ~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~~~~~~~~~~l~~~G~~  214 (302)
T 1iz0_A          137 ALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRGKEVEESLGLLAHGGRL  214 (302)
T ss_dssp             HHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSCTTHHHHHTTEEEEEEE
T ss_pred             HHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCHHHHHHHHHhhccCCEE
Confidence            9999999999998 899999999999999999999999998765 555555578999999 984  37788999999999


Q ss_pred             EEeeCCCCC----Cc--------eeeEEe----ecCHHHHHHHHh---HHHCCCceeeeCCCcccchhhHHHHHHHHHhC
Q 020320          237 VDITWPPSH----PR--------AIYSSL----TVSGEILEKLRP---FIESGKLKAQIDPTGPYKFKDVIEAFRYLETG  297 (327)
Q Consensus       237 v~~g~~~~~----~~--------~~~~~~----~~~~~~~~~~~~---l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~  297 (327)
                      +.+|.....    +.        .+....    ....+.++++++   ++++|++++.  ++++|+++++++||+.+.++
T Consensus       215 v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~  292 (302)
T 1iz0_A          215 VYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELRPV--VGPVFPFAEAEAAFRALLDR  292 (302)
T ss_dssp             EEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBCCC--EEEEEEGGGHHHHHHHTTCT
T ss_pred             EEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcccc--cceEEcHHHHHHHHHHHHcC
Confidence            998754321    10        111111    114577899999   9999999764  47899999999999999888


Q ss_pred             CCCceEEEEe
Q 020320          298 RARGKVVISA  307 (327)
Q Consensus       298 ~~~gk~vv~~  307 (327)
                      +..+|+++.+
T Consensus       293 ~~~gKvvv~~  302 (302)
T 1iz0_A          293 GHTGKVVVRL  302 (302)
T ss_dssp             TCCBEEEEEC
T ss_pred             CCCceEEEeC
Confidence            8889999864

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.8e-44  Score=329.15  Aligned_cols=292  Identities=15%  Similarity=0.148  Sum_probs=235.9

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---------------------------
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---------------------------   53 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---------------------------   53 (327)
                      +||++++....  ..+++++.|.|++++|||||||.+++||++|++.+.|.++                           
T Consensus         7 ~mka~v~~~~~--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            7 QLRSRIKSSGE--LELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEECTTSE--EEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hHHHHHhcCCC--CceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            48888875322  3499999999999999999999999999999999887521                           


Q ss_pred             --CCCCCCcccccccEEEEEeCCCC-CCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhccc
Q 020320           54 --PSDFPAVPGCDMAGIVVAKGTSV-TKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASL  130 (327)
Q Consensus        54 --~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~  130 (327)
                        ...+|.++|||++|+|+++|++| +++++||||++..           .|+|+||+++++++++++|+++++++|+.+
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-----------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  153 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-----------GAMYSQYRCIPADQCLVLPEGATPADGASS  153 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-----------SCCSBSEEEEEGGGEEECCTTCCHHHHTTS
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-----------CCcceeEEEeCHHHeEECCCCCCHHHHHhh
Confidence              23478999999999999999999 8999999999874           599999999999999999999999999999


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEEc-CCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh
Q 020320          131 PLAVQTAIEGFKTAGFKTGQTIFIVG-GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI  209 (327)
Q Consensus       131 ~~~~~ta~~~l~~~~~~~~~~vlI~g-a~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  209 (327)
                      ++.++|||++++... ++|++|||+| |+|++|++++|+||.+ |+++++++++++++++++++|+++++++++.++.+.
T Consensus       154 ~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~  231 (379)
T 3iup_A          154 FVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKD-GIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQD  231 (379)
T ss_dssp             SHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHH-TCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHH
T ss_pred             hhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHH
Confidence            999999998887666 8999999996 7999999999999999 999999999999999999999999999888777654


Q ss_pred             c------cCccEEEeCCCCc---hhhhhhhc-----CCCcEEEe-----------eCCCCCCc--------eeeE-Eeec
Q 020320          210 E------EKFDVLYDTIGDC---KNSFVVAK-----DNAPIVDI-----------TWPPSHPR--------AIYS-SLTV  255 (327)
Q Consensus       210 ~------~~~d~v~d~~g~~---~~~~~~l~-----~~g~~v~~-----------g~~~~~~~--------~~~~-~~~~  255 (327)
                      +      +++|++||++|..   ..++.+++     ++|+++.+           |.....+.        .... ...+
T Consensus       232 v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~~~~~~~~~~~~~~i~g~~~  311 (379)
T 3iup_A          232 LTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLL  311 (379)
T ss_dssp             HHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEEEEEECCCSCSCEEEEECCH
T ss_pred             HHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCCccccccccccceEEEEEEe
Confidence            3      3799999999853   55666664     55444444           32211000        0000 0000


Q ss_pred             -------CH----HHHHHHHhHHHCCCceeeeCCCcccchhhH--HHHHHHHHhCCCCceEEEEeCCC
Q 020320          256 -------SG----EILEKLRPFIESGKLKAQIDPTGPYKFKDV--IEAFRYLETGRARGKVVISAFPY  310 (327)
Q Consensus       256 -------~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i--~~a~~~~~~~~~~gk~vv~~~~~  310 (327)
                             ..    +.++.+++++.+ .+++  .++++|+++++  ++||+.+.+++..||+|++++..
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~--~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~g  376 (379)
T 3iup_A          312 FPFLQKIGRERANALKQRVVAELKT-TFAS--HYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNKG  376 (379)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHTTTT-TTCC--CCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTTT
T ss_pred             eeecccCCHHHHHHHHHHHHHHHhc-cCCC--cceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCCC
Confidence                   12    334666677777 4655  45799999999  99999999999999999998643

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2.4e-43  Score=320.52  Aligned_cols=294  Identities=17%  Similarity=0.154  Sum_probs=236.7

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCC-CeEEEEEEEEeeChHhHhhhcC--CCCCCCC---CCcccccccEEEEEeCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQH-DQLLVQVRAAALNPIDSKRRQR--PLFPSDF---PAVPGCDMAGIVVAKGTS   75 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~-~eVlV~v~~~~i~~~d~~~~~~--~~~~~~~---p~~~G~e~~G~V~~vG~~   75 (327)
                      ||++++++++.+  +++++.|.|.+++ |||+|||.+++||++|++.+.|  .++...+   |.++|||++|+|++  ++
T Consensus         1 MkA~~~~~~g~~--l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~   76 (366)
T 2cdc_A            1 MKAIIVKPPNAG--VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY   76 (366)
T ss_dssp             CEEEEECTTSCC--CEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC
T ss_pred             CeEEEEeCCCCc--eEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC
Confidence            899999998863  8999999999999 9999999999999999999988  5543456   99999999999999  77


Q ss_pred             CCCCCCCCEEEEec------------ccccccC-------cCC-CCCceeeEEEeeccceecCCCCCCHHhhcccchHHH
Q 020320           76 VTKFNTGDEVYGNI------------QDFNAEG-------KLK-QLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQ  135 (327)
Q Consensus        76 v~~~~~Gd~V~~~~------------~~~~~~~-------~~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  135 (327)
                       +++++||||++..            +..+.|.       +.. ..|+|+||++++++.++++|++++ ++|+ ++.++.
T Consensus        77 -~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~~~~~  153 (366)
T 2cdc_A           77 -HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LAQPLA  153 (366)
T ss_dssp             -SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GHHHHH
T ss_pred             -CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh-hcCcHH
Confidence             8999999998753            1233342       122 479999999999999999999999 7765 677889


Q ss_pred             HHHHHHH-----hcCCC--C-------CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc---ccHHHHHHcCCCEE
Q 020320          136 TAIEGFK-----TAGFK--T-------GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST---PKVEFVKELGADKV  198 (327)
Q Consensus       136 ta~~~l~-----~~~~~--~-------~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~---~~~~~~~~~g~~~v  198 (327)
                      |||+++.     ..+++  +       |++|+|+|+ |++|++++|+++.+ |++++++++++   ++.++++++|++++
T Consensus       154 ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v  231 (366)
T 2cdc_A          154 DIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEETKTNYY  231 (366)
T ss_dssp             HHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred             HHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHhCCcee
Confidence            9999997     78888  8       999999997 99999999999999 88988888888   88899999999988


Q ss_pred             EeCCCCChhhhc----cCccEEEeCCCCc----hhhhhhhcCCCcEEEeeCCCCCCce---------------eeEEeec
Q 020320          199 IDYRKTKYEDIE----EKFDVLYDTIGDC----KNSFVVAKDNAPIVDITWPPSHPRA---------------IYSSLTV  255 (327)
Q Consensus       199 ~~~~~~~~~~~~----~~~d~v~d~~g~~----~~~~~~l~~~g~~v~~g~~~~~~~~---------------~~~~~~~  255 (327)
                       + .+ ++.+.+    .++|++||++|..    ..++.+++++|+++.+|........               +......
T Consensus       232 -~-~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~  308 (366)
T 2cdc_A          232 -N-SS-NGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNG  308 (366)
T ss_dssp             -E-CT-TCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEECCCC
T ss_pred             -c-hH-HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEEecCC
Confidence             7 54 443322    5799999999853    5678999999999999865432111               1111122


Q ss_pred             CHHHHHHHHhHHHCCCce----eeeCCCcccchhhHHHHHHHH-HhCCCCceEEEEe
Q 020320          256 SGEILEKLRPFIESGKLK----AQIDPTGPYKFKDVIEAFRYL-ETGRARGKVVISA  307 (327)
Q Consensus       256 ~~~~~~~~~~l~~~g~~~----~~~~~~~~~~~~~i~~a~~~~-~~~~~~gk~vv~~  307 (327)
                      ..+.++++++++++|+++    ..++++++|+++++++||+.+ .++...+|+|+++
T Consensus       309 ~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~  365 (366)
T 2cdc_A          309 QKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILW  365 (366)
T ss_dssp             CHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEEC
T ss_pred             CHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEec
Confidence            468899999999999966    434457899999999999994 3356678999976

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=9.7e-43  Score=342.97  Aligned_cols=289  Identities=26%  Similarity=0.379  Sum_probs=247.7

Q ss_pred             eeEEecccCCCcceEEeeccC--CCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPL--PTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~--p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      .++.+..+|.++.|++.+.|.  |++++|||+|||.++|||++|++.+.|.++   .|.++|||++|+|+++|++|++++
T Consensus       211 ~~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~  287 (795)
T 3slk_A          211 WRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLA  287 (795)
T ss_dssp             CCEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSC
T ss_pred             EEEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCC
Confidence            456778888888899998764  678999999999999999999999988654   456799999999999999999999


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCc
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g  159 (327)
                      +||||+++.           .|+|++|++++++.++++|+++++++|++++.+++|||+++ +.+++++|++|||+|++|
T Consensus       288 vGDrV~~~~-----------~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaG  356 (795)
T 3slk_A          288 PGDRVMGMI-----------PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAG  356 (795)
T ss_dssp             TTCEEEECC-----------SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTB
T ss_pred             CCCEEEEEe-----------cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCC
Confidence            999999874           58999999999999999999999999999999999999998 568999999999999999


Q ss_pred             hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCC--chhhhhhhc
Q 020320          160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGD--CKNSFVVAK  231 (327)
Q Consensus       160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~--~~~~~~~l~  231 (327)
                      ++|++++|+||.+ |++++++++++ +.+.++ +|+++++++++.++.+.+      +++|++||++|+  ...++++++
T Consensus       357 gvG~~aiqlAk~~-Ga~V~~t~~~~-k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~  433 (795)
T 3slk_A          357 GVGMAAIQLARHL-GAEVYATASED-KWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLP  433 (795)
T ss_dssp             HHHHHHHHHHHHT-TCCEEEECCGG-GGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCT
T ss_pred             HHHHHHHHHHHHc-CCEEEEEeChH-Hhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhc
Confidence            9999999999999 99988887655 555555 999999998888877643      479999999974  378899999


Q ss_pred             CCCcEEEeeCCCCCC---------ceeeEEeec-------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHH
Q 020320          232 DNAPIVDITWPPSHP---------RAIYSSLTV-------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLE  295 (327)
Q Consensus       232 ~~g~~v~~g~~~~~~---------~~~~~~~~~-------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~  295 (327)
                      ++|+++.+|......         ...+..+.+       ..+.++++++++++|++++.  ++++|+++++++||+.+.
T Consensus       434 ~~Gr~v~iG~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~--~~~~~~l~~~~eA~~~l~  511 (795)
T 3slk_A          434 RGGRFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPL--PVTAWDVRQAPEALRHLS  511 (795)
T ss_dssp             TCEEEEECCSTTCCCHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCC--CEEEEEGGGHHHHHHHHH
T ss_pred             CCCEEEEeccccccCcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCC--cceeEcHHHHHHHHHHHh
Confidence            999999998654221         111122221       13668999999999999874  579999999999999999


Q ss_pred             hCCCCceEEEEeCCC
Q 020320          296 TGRARGKVVISAFPY  310 (327)
Q Consensus       296 ~~~~~gk~vv~~~~~  310 (327)
                      +++..||+|+++.+.
T Consensus       512 ~g~~~GKvVl~~~~~  526 (795)
T 3slk_A          512 QARHVGKLVLTMPPV  526 (795)
T ss_dssp             HTCCCBEEEEECCCC
T ss_pred             cCCccceEEEecCcc
Confidence            999999999998653

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=5.4e-40  Score=294.89  Aligned_cols=285  Identities=21%  Similarity=0.303  Sum_probs=231.9

Q ss_pred             CceeEEeccc--CCC--cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCC
Q 020320            1 MQNAWYYEEY--GPK--EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSV   76 (327)
Q Consensus         1 ~~~~~v~~~~--~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   76 (327)
                      |||+|++.++  |.+  +.+++++.|.|++++|||||||.+++||+.|+.+ ..   ...+|.++|||++|+|++.  ++
T Consensus         7 ~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~---~~~~p~~~g~e~~G~Vv~~--~v   80 (333)
T 1v3u_A            7 KAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-SK---RLKEGAVMMGQQVARVVES--KN   80 (333)
T ss_dssp             EEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-TT---TCCTTSBCCCCEEEEEEEE--SC
T ss_pred             cccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-cC---cCCCCcccccceEEEEEec--CC
Confidence            5899999985  443  6699999999999999999999999999998743 21   2346788999999999985  67


Q ss_pred             CCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCC----CCHHh-hcccchHHHHHHHHH-HhcCCCCCC
Q 020320           77 TKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKN----ISFEE-AASLPLAVQTAIEGF-KTAGFKTGQ  150 (327)
Q Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~----~~~~~-aa~~~~~~~ta~~~l-~~~~~~~~~  150 (327)
                      +++++||||++.             |+|+||+++++++++++|++    +++++ ++.++.++.|||+++ +..++++|+
T Consensus        81 ~~~~vGdrV~~~-------------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~  147 (333)
T 1v3u_A           81 SAFPAGSIVLAQ-------------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGE  147 (333)
T ss_dssp             TTSCTTCEEEEC-------------CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSC
T ss_pred             CCCCCCCEEEec-------------CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCC
Confidence            899999999974             78999999999999999997    88887 478899999999999 568999999


Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC-CChhhhc-----cCccEEEeCCCCc-
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK-TKYEDIE-----EKFDVLYDTIGDC-  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~-----~~~d~v~d~~g~~-  223 (327)
                      +++|+|++|++|++++++++.. |++++++++++++.+.++++|++.+++..+ .++.+..     +++|++||++|.. 
T Consensus       148 ~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  226 (333)
T 1v3u_A          148 TVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEF  226 (333)
T ss_dssp             EEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCHHH
T ss_pred             EEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCChHH
Confidence            9999998899999999999998 999998889999999999999999888766 5554432     3699999999953 


Q ss_pred             -hhhhhhhcCCCcEEEeeCCCCC----------Cc--------eeeEEee--c----CHHHHHHHHhHHHCCCceeeeCC
Q 020320          224 -KNSFVVAKDNAPIVDITWPPSH----------PR--------AIYSSLT--V----SGEILEKLRPFIESGKLKAQIDP  278 (327)
Q Consensus       224 -~~~~~~l~~~g~~v~~g~~~~~----------~~--------~~~~~~~--~----~~~~~~~~~~l~~~g~~~~~~~~  278 (327)
                       ..++.+++++|+++.+|.....          +.        .+.....  .    ..+.++++++++++|++++... 
T Consensus       227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~-  305 (333)
T 1v3u_A          227 LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEH-  305 (333)
T ss_dssp             HHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEE-
T ss_pred             HHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccc-
Confidence             6788999999999999864320          00        0111111  1    1456788999999999987643 


Q ss_pred             CcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320          279 TGPYKFKDVIEAFRYLETGRARGKVVISA  307 (327)
Q Consensus       279 ~~~~~~~~i~~a~~~~~~~~~~gk~vv~~  307 (327)
                       ..++++++++||+.+.+++..+|+|+++
T Consensus       306 -~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          306 -VTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             -EEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             -cccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence             4579999999999999888889999864

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=2.1e-39  Score=292.50  Aligned_cols=290  Identities=22%  Similarity=0.287  Sum_probs=231.6

Q ss_pred             CceeEEeccc--CCCc--ceEEe--eccCCC-CCCCeEEEEEEEEeeChHhHhhhcCCCCC----CCCCCcccccccEEE
Q 020320            1 MQNAWYYEEY--GPKE--VLKLG--DFPLPT-PQHDQLLVQVRAAALNPIDSKRRQRPLFP----SDFPAVPGCDMAGIV   69 (327)
Q Consensus         1 ~~~~~v~~~~--~~~~--~l~~~--~~~~p~-~~~~eVlV~v~~~~i~~~d~~~~~~~~~~----~~~p~~~G~e~~G~V   69 (327)
                      |||++++...  +.++  .++++  +.|.|. +++|||||||.++++++.|. .+.+.+..    ..+|.++|||++|++
T Consensus         4 ~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~   82 (345)
T 2j3h_A            4 TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYG   82 (345)
T ss_dssp             EEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEE
T ss_pred             cceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecce
Confidence            4899988876  5554  59998  888886 89999999999999988875 33443322    246899999999999


Q ss_pred             EE--eCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccc--eecCCC---CCCHHhhcccchHHHHHHHHH-
Q 020320           70 VA--KGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESL--IAKKPK---NISFEEAASLPLAVQTAIEGF-  141 (327)
Q Consensus        70 ~~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~--~~~~p~---~~~~~~aa~~~~~~~ta~~~l-  141 (327)
                      ++  +|++++++++||||++.             |+|+||++++++.  ++++|+   +++++ ++.++.++.|||+++ 
T Consensus        83 ~~GvV~~~v~~~~vGdrV~~~-------------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~  148 (345)
T 2j3h_A           83 VSRIIESGHPDYKKGDLLWGI-------------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFY  148 (345)
T ss_dssp             EEEEEEECSTTCCTTCEEEEE-------------EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHH
T ss_pred             EEEEEecCCCCCCCCCEEEee-------------cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHH
Confidence            99  99999999999999975             6899999998776  999986   34555 667888999999999 


Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCC-Chhhhc-----cCcc
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKT-KYEDIE-----EKFD  214 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~-----~~~d  214 (327)
                      +.+++++|++|||+|++|++|++++++++.. |++++++++++++.+.++ ++|++++++..+. ++.+..     +++|
T Consensus       149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d  227 (345)
T 2j3h_A          149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGID  227 (345)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEE
T ss_pred             HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCc
Confidence            5689999999999998899999999999998 899888889999999997 7999998887653 443322     4799


Q ss_pred             EEEeCCCC--chhhhhhhcCCCcEEEeeCCCCC-------Cc----------eeeEEeec-----CHHHHHHHHhHHHCC
Q 020320          215 VLYDTIGD--CKNSFVVAKDNAPIVDITWPPSH-------PR----------AIYSSLTV-----SGEILEKLRPFIESG  270 (327)
Q Consensus       215 ~v~d~~g~--~~~~~~~l~~~g~~v~~g~~~~~-------~~----------~~~~~~~~-----~~~~~~~~~~l~~~g  270 (327)
                      ++||++|.  ...++.+++++|+++.+|.....       ..          .+......     ..+.++++++++++|
T Consensus       228 ~vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g  307 (345)
T 2j3h_A          228 IYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREG  307 (345)
T ss_dssp             EEEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTT
T ss_pred             EEEECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCC
Confidence            99999985  36778999999999998754310       00          01111111     124589999999999


Q ss_pred             CceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320          271 KLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF  308 (327)
Q Consensus       271 ~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~  308 (327)
                      ++++..  .+.|+++++++||+.+.+++..||+|+.+.
T Consensus       308 ~i~~~~--~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  343 (345)
T 2j3h_A          308 KITYVE--DVADGLEKAPEALVGLFHGKNVGKQVVVVA  343 (345)
T ss_dssp             SSCCCE--EEEESGGGSHHHHHHHHTTCCSSEEEEESS
T ss_pred             CCcCcc--cccCCHHHHHHHHHHHHcCCCceEEEEEeC
Confidence            998632  457999999999999999998999999884

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.97  E-value=4.9e-31  Score=284.43  Aligned_cols=282  Identities=21%  Similarity=0.304  Sum_probs=227.1

Q ss_pred             EecccCCCcceEEeeccCCC-C--CCCeEEEEEEEEeeChHhHhhhcCCCCCC-------CCCCcccccccEEEEEeCCC
Q 020320            6 YYEEYGPKEVLKLGDFPLPT-P--QHDQLLVQVRAAALNPIDSKRRQRPLFPS-------DFPAVPGCDMAGIVVAKGTS   75 (327)
Q Consensus         6 v~~~~~~~~~l~~~~~~~p~-~--~~~eVlV~v~~~~i~~~d~~~~~~~~~~~-------~~p~~~G~e~~G~V~~vG~~   75 (327)
                      ....+|..+.+.|.+.+... +  .++||+|+|.++++|+.|++...|.++..       ..|+++|+|++|+|.     
T Consensus      1534 ~~~~~g~l~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----- 1608 (2512)
T 2vz8_A         1534 NVLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----- 1608 (2512)
T ss_dssp             EESSTTCTTSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET-----
T ss_pred             EccCCCCcCceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc-----
Confidence            34556777778888876543 3  38999999999999999999988876421       246789999999872     


Q ss_pred             CCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEE
Q 020320           76 VTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFI  154 (327)
Q Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI  154 (327)
                           +||+|+++.          ..|+|++|+++++++++++|+++++++|+++++.++|||+++ ..+++++|++|||
T Consensus      1609 -----vGdrV~g~~----------~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI 1673 (2512)
T 2vz8_A         1609 -----SGRRVMGMV----------PAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLI 1673 (2512)
T ss_dssp             -----TSCCEEEEC----------SSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             -----cCCEEEEee----------cCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence                 799999875          358999999999999999999999999999999999999999 4689999999999


Q ss_pred             EcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhhc------cCccEEEeCCCC--
Q 020320          155 VGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDIE------EKFDVLYDTIGD--  222 (327)
Q Consensus       155 ~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~--  222 (327)
                      +||+|++|++++|+||++ |+++++++.++++.+++++    +|+++++++++.++.+..      +++|+|||+++.  
T Consensus      1674 ~gaaGgVG~aAiqlAk~~-Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~~ 1752 (2512)
T 2vz8_A         1674 HSGSGGVGQAAIAIALSR-GCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEK 1752 (2512)
T ss_dssp             TTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHHH
T ss_pred             EeCChHHHHHHHHHHHHc-CCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCchH
Confidence            999999999999999998 9999999999999998876    789999998877665533      479999999973  


Q ss_pred             chhhhhhhcCCCcEEEeeCCCCCC----------cee-eEEeec------CHHHHHHHHhH----HHCCCceeeeCCCcc
Q 020320          223 CKNSFVVAKDNAPIVDITWPPSHP----------RAI-YSSLTV------SGEILEKLRPF----IESGKLKAQIDPTGP  281 (327)
Q Consensus       223 ~~~~~~~l~~~g~~v~~g~~~~~~----------~~~-~~~~~~------~~~~~~~~~~l----~~~g~~~~~~~~~~~  281 (327)
                      ....+.+++++|+++.+|......          ... +.....      ....+++++++    +.+|++++  .++++
T Consensus      1753 l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p--~i~~~ 1830 (2512)
T 2vz8_A         1753 LQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQP--LKCTV 1830 (2512)
T ss_dssp             HHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCC--CCEEE
T ss_pred             HHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCC--CcceE
Confidence            377889999999999998432100          011 111111      12344555544    45777775  35789


Q ss_pred             cchhhHHHHHHHHHhCCCCceEEEEeCCC
Q 020320          282 YKFKDVIEAFRYLETGRARGKVVISAFPY  310 (327)
Q Consensus       282 ~~~~~i~~a~~~~~~~~~~gk~vv~~~~~  310 (327)
                      |+++++++||+.+.+++..||+|+.+...
T Consensus      1831 f~l~ei~eA~~~l~~g~~~GKvVi~~~~~ 1859 (2512)
T 2vz8_A         1831 FPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859 (2512)
T ss_dssp             EESSTHHHHHHHHHTTCCSSEEEEECSCC
T ss_pred             ecHHHHHHHHHhhhccCccceEEEECCCc
Confidence            99999999999999999999999998654

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.78  E-value=1.2e-18  Score=144.21  Aligned_cols=163  Identities=21%  Similarity=0.325  Sum_probs=119.3

Q ss_pred             cceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH
Q 020320          113 SLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK  191 (327)
Q Consensus       113 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~  191 (327)
                      ++++++|+++++++|++++.++.|||+++. ..++++|++|+|+|++|++|++++++++.. |++++++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence            468899999999999999999999999995 589999999999999999999999999998 899998889988888888


Q ss_pred             HcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCC-CCc---------eeeEE-
Q 020320          192 ELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPS-HPR---------AIYSS-  252 (327)
Q Consensus       192 ~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~-~~~---------~~~~~-  252 (327)
                      ++|++.+++..+.+..+..      .++|+++|++|..  ...+.+++++|+++.+|.... .+.         ..... 
T Consensus        81 ~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  160 (198)
T 1pqw_A           81 RLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSV  160 (198)
T ss_dssp             TTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEE
T ss_pred             HcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCChhHhcCCcEEEE
Confidence            9999988887665544322      3699999999853  678899999999999986431 110         01111 


Q ss_pred             eec------C----HHHHHHHHhHHHCCCceeee
Q 020320          253 LTV------S----GEILEKLRPFIESGKLKAQI  276 (327)
Q Consensus       253 ~~~------~----~~~~~~~~~l~~~g~~~~~~  276 (327)
                      ...      .    .+.++++++++++|++++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  194 (198)
T 1pqw_A          161 VDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP  194 (198)
T ss_dssp             CCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             EehHHhhccCHHHHHHHHHHHHHHHHcCCccCCC
Confidence            000      1    35678899999999998753

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.72  E-value=1.5e-10  Score=105.74  Aligned_cols=175  Identities=18%  Similarity=0.230  Sum_probs=123.2

Q ss_pred             CcccccccEEEEEeCCCCCCCCCCCEEEEe--cccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHH
Q 020320           59 AVPGCDMAGIVVAKGTSVTKFNTGDEVYGN--IQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQT  136 (327)
Q Consensus        59 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  136 (327)
                      ...|++.++.|.++|++++++.+|+.++.-  ......|   ...|++++|.......++.+|++++.+.++.. .+..+
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~---~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~  150 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRA---ARLGTLDEALKIVFRRAINLGKRAREETRISE-GAVSI  150 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHH---HHHTCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHH---HHcCCchHHHHHHHHHHhhhhccCcchhhhcC-CCccH
Confidence            456999999999999999999999997421  0000000   12466788887777888888888777665532 23345


Q ss_pred             HHHHHHhcC----CCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccH-HHHHHcCCCEEEeCCCCChhhhc
Q 020320          137 AIEGFKTAG----FKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKV-EFVKELGADKVIDYRKTKYEDIE  210 (327)
Q Consensus       137 a~~~l~~~~----~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~  210 (327)
                      +|+++....    -.+|++|+|+| +|.+|.++++.++.. |. +++++.+++++. ++++++|++ +++.  .++.+..
T Consensus       151 a~~av~~a~~~~~~l~g~~VlIiG-aG~iG~~~a~~l~~~-G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~l~~~l  225 (404)
T 1gpj_A          151 GSAAVELAERELGSLHDKTVLVVG-AGEMGKTVAKSLVDR-GVRAVLVANRTYERAVELARDLGGE-AVRF--DELVDHL  225 (404)
T ss_dssp             HHHHHHHHHHHHSCCTTCEEEEES-CCHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHHHHHTCE-ECCG--GGHHHHH
T ss_pred             HHHHHHHHHHHhccccCCEEEEEC-hHHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCc-eecH--HhHHHHh
Confidence            777764322    35899999999 699999999999998 87 777777888775 677889876 3322  2344455


Q ss_pred             cCccEEEeCCCCc-----hhhhhh--h--cCCCcEEEeeCC
Q 020320          211 EKFDVLYDTIGDC-----KNSFVV--A--KDNAPIVDITWP  242 (327)
Q Consensus       211 ~~~d~v~d~~g~~-----~~~~~~--l--~~~g~~v~~g~~  242 (327)
                      .++|+++++++..     ...+..  +  ++++.++.++..
T Consensus       226 ~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          226 ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            7899999999843     134444  3  557777777653

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.37  E-value=2.1e-06  Score=79.61  Aligned_cols=155  Identities=20%  Similarity=0.245  Sum_probs=106.0

Q ss_pred             CCCcccccccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHH
Q 020320           57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQT  136 (327)
Q Consensus        57 ~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  136 (327)
                      +|.++ +++.|+|+++|.++.++      ..+.          ..|.+......-.+.+.+-    .++   -++....+
T Consensus       204 ~p~~~-~~i~GvveetgtGVd~l------~a~~----------~~Gilv~~~~~vn~sVae~----~~r---~l~~~~~s  259 (494)
T 3ce6_A          204 WTKIA-ESVKGVTEETTTGVLRL------YQFA----------AAGDLAFPAINVNDSVTKS----KFD---NKYGTRHS  259 (494)
T ss_dssp             HHHHH-HHCCCEEECSHHHHHHH------HHHH----------HTTCCCSCEEECTTSHHHH----TTH---HHHHHHHH
T ss_pred             chhhh-cCeEEEEEEeCCChhHH------HHHH----------HcCCEEEecCCccHHHHHH----HHh---hhhhhhhh
Confidence            45455 78999999999888765      1110          1233322222211122220    000   11233456


Q ss_pred             HHHHHHhc--CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320          137 AIEGFKTA--GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       137 a~~~l~~~--~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d  214 (327)
                      +|+++.+.  ...+|++|+|+| .|.+|+.+++.++.+ |++++++.+++.+.+.+.++|++ ++     ++.+.+.++|
T Consensus       260 ~~~g~~r~~~~~l~GktV~IiG-~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~Ga~-~~-----~l~e~l~~aD  331 (494)
T 3ce6_A          260 LIDGINRGTDALIGGKKVLICG-YGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMMEGFD-VV-----TVEEAIGDAD  331 (494)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHHGGGCS
T ss_pred             hhHHHHhccCCCCCcCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCE-Ee-----cHHHHHhCCC
Confidence            77777543  378999999999 899999999999998 89988888898888888899986 32     2344567899


Q ss_pred             EEEeCCCCc---h-hhhhhhcCCCcEEEeeCCC
Q 020320          215 VLYDTIGDC---K-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       215 ~v~d~~g~~---~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ++++++|..   . ..+..++++|+++.+|...
T Consensus       332 vVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          332 IVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             EEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             EEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence            999999843   3 6788999999999998643

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.34  E-value=7.4e-07  Score=79.98  Aligned_cols=92  Identities=17%  Similarity=0.243  Sum_probs=72.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCE--EEeCCCCChhhhccCccEEEeCCCCc---
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK--VIDYRKTKYEDIEEKFDVLYDTIGDC---  223 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~d~v~d~~g~~---  223 (327)
                      +++|+|+| +|++|+++++.++.+ |++++++.+++++.+.+++++++.  +++.+..++.+...++|+++++++..   
T Consensus       167 ~~~VlViG-aGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~  244 (361)
T 1pjc_A          167 PGKVVILG-GGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR  244 (361)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence            48999999 599999999999999 888888889999998888776543  34333334445556899999998632   


Q ss_pred             ------hhhhhhhcCCCcEEEeeCC
Q 020320          224 ------KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       224 ------~~~~~~l~~~g~~v~~g~~  242 (327)
                            ...+..++++|.++.++..
T Consensus       245 ~~~li~~~~~~~~~~g~~ivdv~~~  269 (361)
T 1pjc_A          245 APILVPASLVEQMRTGSVIVDVAVD  269 (361)
T ss_dssp             CCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred             CCeecCHHHHhhCCCCCEEEEEecC
Confidence                  3457889999999998754

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.24  E-value=3.6e-06  Score=76.14  Aligned_cols=92  Identities=22%  Similarity=0.285  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCC---------------CC------
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRK---------------TK------  205 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~---------------~~------  205 (327)
                      ++++|+|+| +|.+|++++++++.+ |+++++.++++++.+.++++|++.+ ++..+               .+      
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFG-VGVAGLQAIATAKRL-GAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            689999999 899999999999998 8888888889899988988998754 22211               00      


Q ss_pred             --hhhhccCccEEEeCC---CC----c--hhhhhhhcCCCcEEEeeC
Q 020320          206 --YEDIEEKFDVLYDTI---GD----C--KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       206 --~~~~~~~~d~v~d~~---g~----~--~~~~~~l~~~g~~v~~g~  241 (327)
                        +.+...++|++++++   |.    .  ...+..+++++.++.++.
T Consensus       249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~  295 (384)
T 1l7d_A          249 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  295 (384)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence              334456899999998   52    1  456788999999999874

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.11  E-value=6.9e-06  Score=74.57  Aligned_cols=92  Identities=23%  Similarity=0.339  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCC-------------CC--------C
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYR-------------KT--------K  205 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~-------------~~--------~  205 (327)
                      ++++|+|+| +|.+|++++++++.+ |+++++.++++++.+.++++|++.+. +..             ..        .
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIG-AGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence            589999999 799999999999998 88888888999999889999987542 111             00        1


Q ss_pred             hhhhccCccEEEeCC---C--C---c-hhhhhhhcCCCcEEEeeC
Q 020320          206 YEDIEEKFDVLYDTI---G--D---C-KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       206 ~~~~~~~~d~v~d~~---g--~---~-~~~~~~l~~~g~~v~~g~  241 (327)
                      +.+...++|++++++   |  .   . ...+..|++++.++.++.
T Consensus       249 l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~  293 (401)
T 1x13_A          249 FAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA  293 (401)
T ss_dssp             HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence            233446799999995   3  1   1 457888999999999874

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.10  E-value=8e-06  Score=73.62  Aligned_cols=92  Identities=17%  Similarity=0.205  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEE-eCCCCChhhhccCccEEEeCCCC---
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVI-DYRKTKYEDIEEKFDVLYDTIGD---  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~-~~~~~~~~~~~~~~d~v~d~~g~---  222 (327)
                      ++++|+|+| +|.+|+++++.++.+ |+++++.++++++.+.+++ +|++... .....++.+...++|+++++++.   
T Consensus       167 ~g~~V~ViG-~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~  244 (377)
T 2vhw_A          167 EPADVVVIG-AGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA  244 (377)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence            589999999 699999999999998 8998888899988888876 7766322 22223344455689999999862   


Q ss_pred             ------chhhhhhhcCCCcEEEeeC
Q 020320          223 ------CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       223 ------~~~~~~~l~~~g~~v~~g~  241 (327)
                            ....+..++++|.++.++.
T Consensus       245 ~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          245 KAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             CCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             CCcceecHHHHhcCCCCcEEEEEec
Confidence                  2456788999999999974

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.09  E-value=6.7e-06  Score=63.52  Aligned_cols=102  Identities=15%  Similarity=0.136  Sum_probs=73.7

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH-HHHHcCCCEEEeCCCCChhhhccCccE
Q 020320          137 AIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE-FVKELGADKVIDYRKTKYEDIEEKFDV  215 (327)
Q Consensus       137 a~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~d~  215 (327)
                      ++++++......+++++|+| +|.+|.+.++.++.. |.++++..+++++.+ ++++++.+.. .  ..+..+...++|+
T Consensus         9 ~~~a~~~~~~~~~~~v~iiG-~G~iG~~~a~~l~~~-g~~v~v~~r~~~~~~~~a~~~~~~~~-~--~~~~~~~~~~~Di   83 (144)
T 3oj0_A            9 PSIVYDIVRKNGGNKILLVG-NGMLASEIAPYFSYP-QYKVTVAGRNIDHVRAFAEKYEYEYV-L--INDIDSLIKNNDV   83 (144)
T ss_dssp             HHHHHHHHHHHCCCEEEEEC-CSHHHHHHGGGCCTT-TCEEEEEESCHHHHHHHHHHHTCEEE-E--CSCHHHHHHTCSE
T ss_pred             HHHHHHHHHhccCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCHHHHHHHHHHhCCceE-e--ecCHHHHhcCCCE
Confidence            67777655545599999999 799999999988887 888667778877764 4577875432 1  1234455678999


Q ss_pred             EEeCCCCc--hhhhhhhcCCCcEEEeeCCC
Q 020320          216 LYDTIGDC--KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       216 v~d~~g~~--~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ++.+++..  ......+++++.++.++.+.
T Consensus        84 vi~at~~~~~~~~~~~l~~g~~vid~~~p~  113 (144)
T 3oj0_A           84 IITATSSKTPIVEERSLMPGKLFIDLGNPP  113 (144)
T ss_dssp             EEECSCCSSCSBCGGGCCTTCEEEECCSSC
T ss_pred             EEEeCCCCCcEeeHHHcCCCCEEEEccCCc
Confidence            99999854  22336778888888887654

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.05  E-value=1.2e-05  Score=72.40  Aligned_cols=93  Identities=19%  Similarity=0.364  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEEeC-CCCChhhhccCccEEEeCCCC---
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVIDY-RKTKYEDIEEKFDVLYDTIGD---  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~~~-~~~~~~~~~~~~d~v~d~~g~---  222 (327)
                      .+++|+|+|+ |.+|+++++.++.+ |+++++.++++++.+.+++ +|.+...+. ...++.+...++|+++++++.   
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~  242 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGA  242 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence            4689999995 99999999999998 9999998999888877765 777632322 223344455689999999973   


Q ss_pred             ------chhhhhhhcCCCcEEEeeCC
Q 020320          223 ------CKNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       223 ------~~~~~~~l~~~g~~v~~g~~  242 (327)
                            ....+..++++|.++.++..
T Consensus       243 ~~~~li~~~~l~~mk~gg~iV~v~~~  268 (369)
T 2eez_A          243 KAPKLVTRDMLSLMKEGAVIVDVAVD  268 (369)
T ss_dssp             ---CCSCHHHHTTSCTTCEEEECC--
T ss_pred             ccchhHHHHHHHhhcCCCEEEEEecC
Confidence                  24567888999999988754

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.04  E-value=1.8e-05  Score=66.68  Aligned_cols=100  Identities=11%  Similarity=0.107  Sum_probs=69.4

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCC-CEE--EeCCCCChhhh
Q 020320          137 AIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGA-DKV--IDYRKTKYEDI  209 (327)
Q Consensus       137 a~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~-~~v--~~~~~~~~~~~  209 (327)
                      +.+.+...++.++++||..| +| .|..+..+++.  +.+++.++.+++..+.+++    .+. +.+  +..+-......
T Consensus        80 ~~~~~~~~~~~~~~~vldiG-~G-~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~  155 (248)
T 2yvl_A           80 SFYIALKLNLNKEKRVLEFG-TG-SGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP  155 (248)
T ss_dssp             HHHHHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC
T ss_pred             HHHHHHhcCCCCCCEEEEeC-CC-ccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC
Confidence            44566778889999999999 77 69999999986  7788888889888877765    343 211  11111111101


Q ss_pred             ccCccEEEeCCCCc----hhhhhhhcCCCcEEEee
Q 020320          210 EEKFDVLYDTIGDC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       210 ~~~~d~v~d~~g~~----~~~~~~l~~~g~~v~~g  240 (327)
                      ...+|+++...+..    ..+.+.|+++|+++...
T Consensus       156 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  190 (248)
T 2yvl_A          156 EGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLL  190 (248)
T ss_dssp             TTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred             CCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            24699999877643    55678899999988764

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.85  E-value=2.1e-05  Score=70.19  Aligned_cols=92  Identities=21%  Similarity=0.228  Sum_probs=71.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC---------C-----------CCChh
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY---------R-----------KTKYE  207 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~---------~-----------~~~~~  207 (327)
                      ++.+|+|+| +|.+|+.+++.++.+ |+++++.++++++.+.++++|++.+-..         .           ...+.
T Consensus       183 ~~~kV~ViG-~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLG-VGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEES-CSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            678999999 799999999999999 9999999999999999999997643100         0           01223


Q ss_pred             hhccCccEEEeCCC---C-----c-hhhhhhhcCCCcEEEeeC
Q 020320          208 DIEEKFDVLYDTIG---D-----C-KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       208 ~~~~~~d~v~d~~g---~-----~-~~~~~~l~~~g~~v~~g~  241 (327)
                      +.+.++|+++.++.   .     . ...++.+++++.++.++.
T Consensus       261 e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~  303 (381)
T 3p2y_A          261 DAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG  303 (381)
T ss_dssp             HHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence            34478999999862   1     1 567888999999998853

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.84  E-value=4.1e-05  Score=68.91  Aligned_cols=92  Identities=24%  Similarity=0.275  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC-------------CC-----------
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY-------------RK-----------  203 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~-------------~~-----------  203 (327)
                      ++.+|+|+| +|.+|+.++++++.+ |+++++.+.++++++.++++|++.+...             ..           
T Consensus       189 ~~~kV~ViG-~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMG-AGVAGLQAIATARRL-GAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            678999999 799999999999999 9999999999999999999987643210             00           


Q ss_pred             CChhhhccCccEEEeCCC--C-------chhhhhhhcCCCcEEEeeC
Q 020320          204 TKYEDIEEKFDVLYDTIG--D-------CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       204 ~~~~~~~~~~d~v~d~~g--~-------~~~~~~~l~~~g~~v~~g~  241 (327)
                      ..+.+.+.++|++|.++.  .       ....++.++++..++.++.
T Consensus       267 ~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~  313 (405)
T 4dio_A          267 ALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV  313 (405)
T ss_dssp             HHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred             hHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence            022333468999999863  1       1567889999999999853

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.71  E-value=0.00029  Score=63.60  Aligned_cols=99  Identities=15%  Similarity=0.221  Sum_probs=76.8

Q ss_pred             HHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320          137 AIEGFKT--AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       137 a~~~l~~--~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d  214 (327)
                      .+.++.+  ...-.|++++|.| .|.+|..+++.++.+ |++++++..++.+...+...|... .     ++.+.+...|
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG-~G~IGk~vA~~Lra~-Ga~Viv~D~dp~ra~~A~~~G~~v-~-----~Leeal~~AD  277 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCG-YGEVGKGCCAALKAM-GSIVYVTEIDPICALQACMDGFRL-V-----KLNEVIRQVD  277 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEE-C-----CHHHHTTTCS
T ss_pred             HHHHHHHhhCceecCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEEeCChhhhHHHHHcCCEe-c-----cHHHHHhcCC
Confidence            4555543  3456899999999 999999999999998 999888888887766666677532 1     3556678899


Q ss_pred             EEEeCCCCc----hhhhhhhcCCCcEEEeeCCC
Q 020320          215 VLYDTIGDC----KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       215 ~v~d~~g~~----~~~~~~l~~~g~~v~~g~~~  243 (327)
                      +++.|.|..    ...+..+++++.++.++...
T Consensus       278 IVi~atgt~~lI~~e~l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          278 IVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             EEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred             EEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence            999988732    47788999999999987543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.54  E-value=0.00047  Score=57.53  Aligned_cols=73  Identities=21%  Similarity=0.337  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC-CEEE-eCCCCChhhhccCccEEEeCCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA-DKVI-DYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~-~~v~-~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      .+.+|+|+||+|.+|..++..+... |.+++++++++++.+.+.+.+. ..+. |-. ..+.+...++|+++.++|.
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~D~vi~~ag~   94 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNK-GHEPVAMVRNEEQGPELRERGASDIVVANLE-EDFSHAFASIDAVVFAAGS   94 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGGGGTTCSEEEECCCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhC-CCeEEEEECChHHHHHHHhCCCceEEEcccH-HHHHHHHcCCCEEEECCCC
Confidence            4789999999999999998888887 9999999999988877776666 4432 222 4455566799999999883

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.54  E-value=0.00059  Score=61.82  Aligned_cols=98  Identities=18%  Similarity=0.192  Sum_probs=74.8

Q ss_pred             HHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320          137 AIEGFKT--AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       137 a~~~l~~--~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d  214 (327)
                      .+.++.+  ...-.|++++|+| .|.+|..+++.++.+ |++++++..++.+...+...|... +     ++.+.+..+|
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG-~G~IGr~vA~~lraf-Ga~Viv~d~dp~~a~~A~~~G~~v-v-----~LeElL~~AD  304 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCG-YGDVGKGSAQSLAGA-GARVKVTEVDPICALQAAMDGFEV-V-----TLDDAASTAD  304 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHTTCEE-C-----CHHHHGGGCS
T ss_pred             HHHHHHHhcCCcccCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEEeCCcchhhHHHhcCcee-c-----cHHHHHhhCC
Confidence            3444433  3456899999999 999999999999998 999988888776655556666542 2     2455677899


Q ss_pred             EEEeCCCCc----hhhhhhhcCCCcEEEeeCC
Q 020320          215 VLYDTIGDC----KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       215 ~v~d~~g~~----~~~~~~l~~~g~~v~~g~~  242 (327)
                      +++.+.|..    ...+..|++++.++.+|..
T Consensus       305 IVv~atgt~~lI~~e~l~~MK~GAILINvGRg  336 (464)
T 3n58_A          305 IVVTTTGNKDVITIDHMRKMKDMCIVGNIGHF  336 (464)
T ss_dssp             EEEECCSSSSSBCHHHHHHSCTTEEEEECSSS
T ss_pred             EEEECCCCccccCHHHHhcCCCCeEEEEcCCC
Confidence            999988742    5678899999999988754

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.51  E-value=0.0005  Score=59.25  Aligned_cols=95  Identities=23%  Similarity=0.309  Sum_probs=69.4

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEE--EeCCCCChhhhccCccEE
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKV--IDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~~~~~~d~v  216 (327)
                      .++++++++||.+| ||+.+..++.+++.. |++++.++.+++..+.+++    .|.+.+  +..+...+.  ...+|+|
T Consensus       117 la~l~~g~rVLDIG-cG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV  192 (298)
T 3fpf_A          117 LGRFRRGERAVFIG-GGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVL  192 (298)
T ss_dssp             HTTCCTTCEEEEEC-CCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEE
T ss_pred             HcCCCCcCEEEEEC-CCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEE
Confidence            47889999999999 998888888888876 8999999999998888765    354322  222222221  3579999


Q ss_pred             EeCCCC------chhhhhhhcCCCcEEEeeC
Q 020320          217 YDTIGD------CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       217 ~d~~g~------~~~~~~~l~~~g~~v~~g~  241 (327)
                      +.....      .....+.|+|||+++....
T Consensus       193 ~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          193 MVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             EECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             EECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            965442      2556788999999997753

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.49  E-value=0.00042  Score=60.07  Aligned_cols=91  Identities=20%  Similarity=0.268  Sum_probs=70.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      --.|++++|+| .|.+|.++++.++.+ |.++++..+++++.+.+.++|++. ++.  .++.+.+..+|+++.++...  
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~-~~~--~~l~~~l~~aDvVi~~~p~~~i  226 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAAL-GAKVKVGARESDLLARIAEMGMEP-FHI--SKAAQELRDVDVCINTIPALVV  226 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTSEE-EEG--GGHHHHTTTCSEEEECCSSCCB
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHCCCee-cCh--hhHHHHhcCCCEEEECCChHHh
Confidence            34789999999 899999999999998 898888888887776677788653 221  23444567899999998632  


Q ss_pred             -hhhhhhhcCCCcEEEeeC
Q 020320          224 -KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       224 -~~~~~~l~~~g~~v~~g~  241 (327)
                       ...+..+++++.++.++.
T Consensus       227 ~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          227 TANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             CHHHHHHSCTTCEEEECSS
T ss_pred             CHHHHHhcCCCCEEEEecC
Confidence             456778899999988874

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.40  E-value=0.0006  Score=62.70  Aligned_cols=88  Identities=23%  Similarity=0.270  Sum_probs=69.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---  223 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  223 (327)
                      -.|++++|+| +|++|.++++.++.. |++++++..++.+...+...|++ +.     +..+....+|+++++.|..   
T Consensus       263 L~GKtVvVtG-aGgIG~aiA~~Laa~-GA~Viv~D~~~~~a~~Aa~~g~d-v~-----~lee~~~~aDvVi~atG~~~vl  334 (488)
T 3ond_A          263 IAGKVAVVAG-YGDVGKGCAAALKQA-GARVIVTEIDPICALQATMEGLQ-VL-----TLEDVVSEADIFVTTTGNKDII  334 (488)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCE-EC-----CGGGTTTTCSEEEECSSCSCSB
T ss_pred             ccCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHhCCc-cC-----CHHHHHHhcCEEEeCCCChhhh
Confidence            5799999999 789999999999998 99988888888777777777753 21     2334456799999998843   


Q ss_pred             -hhhhhhhcCCCcEEEeeCC
Q 020320          224 -KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       224 -~~~~~~l~~~g~~v~~g~~  242 (327)
                       ...+..+++++.++..|..
T Consensus       335 ~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          335 MLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             CHHHHTTSCTTEEEEESSST
T ss_pred             hHHHHHhcCCCeEEEEcCCC
Confidence             4477888999999888754

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.38  E-value=0.00061  Score=58.29  Aligned_cols=94  Identities=16%  Similarity=0.252  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh----------hccCcc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED----------IEEKFD  214 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~----------~~~~~d  214 (327)
                      -.|+.+||+||++++|.++++.+... |+++++..+++++++.+ +++|.... +..+-.+..+          ...++|
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~-Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAE-GARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999988888887 99999999988876544 66775432 2222222211          124799


Q ss_pred             EEEeCCCC----------------------------chhhhhhhcCCCcEEEeeC
Q 020320          215 VLYDTIGD----------------------------CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       215 ~v~d~~g~----------------------------~~~~~~~l~~~g~~v~~g~  241 (327)
                      ++++++|.                            ...++..|+++|+++.++.
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS  160 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS  160 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence            99999872                            0224556778888888753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.36  E-value=0.00061  Score=49.91  Aligned_cols=73  Identities=19%  Similarity=0.261  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g~  222 (327)
                      .+.+|+|+|+ |.+|..+++.+... | .+++++.+++++.+.+...+...+. +..+ ....+...++|+++++++.
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~   79 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTS-SNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPF   79 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHC-SSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCG
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCc
Confidence            3568999996 99999999999888 7 7788888988888777766654432 2221 1233345789999999973

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.33  E-value=0.00082  Score=58.45  Aligned_cols=91  Identities=16%  Similarity=0.271  Sum_probs=70.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      --.+++++|+| +|.+|.++++.++.+ |.++++..+++++.+.+.++|.. +++.  .++.+...++|+++.++...  
T Consensus       154 ~l~g~~v~IiG-~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~-~~~~--~~l~~~l~~aDvVi~~~p~~~i  228 (300)
T 2rir_A          154 TIHGSQVAVLG-LGRTGMTIARTFAAL-GANVKVGARSSAHLARITEMGLV-PFHT--DELKEHVKDIDICINTIPSMIL  228 (300)
T ss_dssp             CSTTSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCE-EEEG--GGHHHHSTTCSEEEECCSSCCB
T ss_pred             CCCCCEEEEEc-ccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCCe-EEch--hhHHHHhhCCCEEEECCChhhh
Confidence            34689999999 899999999999988 89988888888777766677764 2222  23445567899999998732  


Q ss_pred             -hhhhhhhcCCCcEEEeeC
Q 020320          224 -KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       224 -~~~~~~l~~~g~~v~~g~  241 (327)
                       ...+..+++++.++.++.
T Consensus       229 ~~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          229 NQTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             CHHHHTTSCTTCEEEECSS
T ss_pred             CHHHHHhCCCCCEEEEEeC
Confidence             446678899999988875

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.25  E-value=0.0017  Score=55.59  Aligned_cols=99  Identities=14%  Similarity=0.181  Sum_probs=66.3

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cCC-CEEEeCCCCChhhhc--
Q 020320          139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LGA-DKVIDYRKTKYEDIE--  210 (327)
Q Consensus       139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~--  210 (327)
                      ..+....+.++++||-.| +|. |..+..+++.++ +.+++.++.+++..+.+++    .+. +.+ .....++.+..  
T Consensus       103 ~i~~~~~~~~~~~VLDiG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v-~~~~~d~~~~~~~  179 (277)
T 1o54_A          103 FIAMMLDVKEGDRIIDTG-VGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERV-TIKVRDISEGFDE  179 (277)
T ss_dssp             HHHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGE-EEECCCGGGCCSC
T ss_pred             HHHHHhCCCCCCEEEEEC-CcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCE-EEEECCHHHcccC
Confidence            344667889999999999 777 888888888853 4677788888887777754    343 222 11112222222  


Q ss_pred             cCccEEEeCCCCc----hhhhhhhcCCCcEEEee
Q 020320          211 EKFDVLYDTIGDC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       211 ~~~d~v~d~~g~~----~~~~~~l~~~g~~v~~g  240 (327)
                      ..+|+++......    ..+.+.|+++|.++...
T Consensus       180 ~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          180 KDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             CSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             CccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            3589999655432    55678899999988764

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.20  E-value=0.0014  Score=59.27  Aligned_cols=97  Identities=24%  Similarity=0.325  Sum_probs=74.5

Q ss_pred             HHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320          137 AIEGFKT--AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       137 a~~~l~~--~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d  214 (327)
                      .+.++.+  ...-.|++|+|.| .|.+|..+++.++.+ |+++++...++.+...+...|...+      ++.+.+..+|
T Consensus       197 lldgi~ratg~~L~GktVgIiG-~G~IG~~vA~~Lka~-Ga~Viv~D~~p~~a~~A~~~G~~~~------sL~eal~~AD  268 (436)
T 3h9u_A          197 LVDGIKRATDVMIAGKTACVCG-YGDVGKGCAAALRGF-GARVVVTEVDPINALQAAMEGYQVL------LVEDVVEEAH  268 (436)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEEC------CHHHHTTTCS
T ss_pred             HHHHHHHhcCCcccCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEECCChhhhHHHHHhCCeec------CHHHHHhhCC
Confidence            3444432  3445799999999 999999999999998 9998888888777666767776422      4566778899


Q ss_pred             EEEeCCCCc----hhhhhhhcCCCcEEEeeC
Q 020320          215 VLYDTIGDC----KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       215 ~v~d~~g~~----~~~~~~l~~~g~~v~~g~  241 (327)
                      +++.+.+..    ...+..|+++..++.++.
T Consensus       269 VVilt~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          269 IFVTTTGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             EEEECSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             EEEECCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence            999887732    467888999999988864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.08  E-value=0.0022  Score=49.73  Aligned_cols=76  Identities=24%  Similarity=0.321  Sum_probs=55.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCCChh---hh-ccCccEEEeC
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKTKYE---DI-EEKFDVLYDT  219 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~---~~-~~~~d~v~d~  219 (327)
                      ...++++|+|+| +|.+|..+++.++.. |.+++++++++++.+.++ +.|... +..+..+..   .. ..++|+++.+
T Consensus        15 ~~~~~~~v~IiG-~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~-~~~d~~~~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           15 KKQKSKYIVIFG-CGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFT-VVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             --CCCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEE-EESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             cccCCCcEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcE-EEecCCCHHHHHHcCcccCCEEEEE
Confidence            346788999999 799999999999988 888988889888877666 566553 322222211   11 4579999999


Q ss_pred             CCCc
Q 020320          220 IGDC  223 (327)
Q Consensus       220 ~g~~  223 (327)
                      ++..
T Consensus        92 ~~~~   95 (155)
T 2g1u_A           92 TNDD   95 (155)
T ss_dssp             SSCH
T ss_pred             eCCc
Confidence            9864

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.90  E-value=0.0043  Score=52.16  Aligned_cols=72  Identities=11%  Similarity=0.117  Sum_probs=51.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCCChhh----------hccCccEEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKTKYED----------IEEKFDVLY  217 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~----------~~~~~d~v~  217 (327)
                      ++++||+||++++|.+.++.+... |+++++..+++++.+.+.+.+.... +..+-.+..+          ...++|+++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEA-GDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            378999999999999988888777 9999999998887766655443332 2211122111          125799999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      +++|
T Consensus        81 NNAG   84 (247)
T 3ged_A           81 NNAC   84 (247)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=96.90  E-value=0.0052  Score=46.69  Aligned_cols=89  Identities=22%  Similarity=0.166  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC--hhh--hccCccEEEeCCCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK--YED--IEEKFDVLYDTIGDC  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~--~~~~~d~v~d~~g~~  223 (327)
                      -.++++|.| +|.+|...++.++.. |.++++++.++++.+.+++.|...+. .+..+  ...  ...++|.++-+++..
T Consensus         6 ~~~~viIiG-~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~~g~~~i~-gd~~~~~~l~~a~i~~ad~vi~~~~~~   82 (140)
T 3fwz_A            6 ICNHALLVG-YGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRERGVRAVL-GNAANEEIMQLAHLECAKWLILTIPNG   82 (140)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTTCEEEE-SCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHcCCCEEE-CCCCCHHHHHhcCcccCCEEEEECCCh
Confidence            357899999 899999999999988 99999999999999988888876443 22222  222  135799999998854


Q ss_pred             h------hhhhhhcCCCcEEEe
Q 020320          224 K------NSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 ~------~~~~~l~~~g~~v~~  239 (327)
                      .      ...+.+.+..+++..
T Consensus        83 ~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           83 YEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             HHHHHHHHHHHHHCSSSEEEEE
T ss_pred             HHHHHHHHHHHHHCCCCeEEEE
Confidence            1      123344555555443

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.86  E-value=0.013  Score=49.47  Aligned_cols=73  Identities=18%  Similarity=0.221  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCC--EEEeCCCCChhh----------h
Q 020320          148 TGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGAD--KVIDYRKTKYED----------I  209 (327)
Q Consensus       148 ~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~--~v~~~~~~~~~~----------~  209 (327)
                      .|+++||+||+|  ++|.+.++.+... |+++++..++++..+.+.    +++..  ..+.-+-.+..+          .
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999876  8999988877777 999999998887665443    34422  222222122111          1


Q ss_pred             ccCccEEEeCCC
Q 020320          210 EEKFDVLYDTIG  221 (327)
Q Consensus       210 ~~~~d~v~d~~g  221 (327)
                      ..++|++++++|
T Consensus        84 ~G~iD~lvnnAg   95 (256)
T 4fs3_A           84 VGNIDGVYHSIA   95 (256)
T ss_dssp             HCCCSEEEECCC
T ss_pred             hCCCCEEEeccc
Confidence            257999999887

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.81  E-value=0.0026  Score=52.30  Aligned_cols=70  Identities=13%  Similarity=0.165  Sum_probs=51.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCChhhhccCccEEEeCCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      +|||+||+|.+|..++..+... |.+++++.+++++...+...+...+. |..+... ....++|++|.++|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRR-GHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecccccccccCCCceEEecccccccH-hhcccCCEEEECCcc
Confidence            5999999999999999888888 89999999988776554333443332 2222222 556789999999874

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.80  E-value=0.0069  Score=51.14  Aligned_cols=73  Identities=15%  Similarity=0.291  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEE-eCCCCChhh----------hccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVI-DYRKTKYED----------IEEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~-~~~~~~~~~----------~~~~  212 (327)
                      .|+.+||+||++++|.+.++.+... |++++++.+++++.+.+    ++.|.+... ..+-.+..+          ...+
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988877777 99999999988766444    345544332 111122211          1257


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        85 iDiLVNNAG   93 (254)
T 4fn4_A           85 IDVLCNNAG   93 (254)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=96.74  E-value=0.01  Score=47.20  Aligned_cols=74  Identities=15%  Similarity=0.235  Sum_probs=55.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCC-hhhh--ccCccEEEeCCCCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTK-YEDI--EEKFDVLYDTIGDC  223 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~-~~~~--~~~~d~v~d~~g~~  223 (327)
                      +++++|+| +|.+|..+++.++..+|.+++++++++++.+.+++.|...+. +..+.+ +...  ..++|+++.+++..
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~  116 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH  116 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence            67899999 899999999888864267899999999988888888877544 222212 2222  46799999998854

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.71  E-value=0.0034  Score=51.34  Aligned_cols=88  Identities=16%  Similarity=0.179  Sum_probs=59.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCChhhhccCccEEEeCCCCc------
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTKYEDIEEKFDVLYDTIGDC------  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~d~v~d~~g~~------  223 (327)
                      +|||+||+|.+|..++..+... |.+++++++++++...+. .+...+. |..+... +...++|++|.++|..      
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~~~~~~   78 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNR-GHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL-SDLSDQNVVVDAYGISPDEAEK   78 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH-HHHTTCSEEEECCCSSTTTTTS
T ss_pred             eEEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCchhhhhcc-CCCeEEeccccChhh-hhhcCCCEEEECCcCCccccch
Confidence            6999999999999999988888 899999999887665443 3333322 2222222 5567899999999842      


Q ss_pred             -----hhhhhhhcC--CCcEEEeeC
Q 020320          224 -----KNSFVVAKD--NAPIVDITW  241 (327)
Q Consensus       224 -----~~~~~~l~~--~g~~v~~g~  241 (327)
                           ...+..++.  .++++.++.
T Consensus        79 ~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           79 HVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             HHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHhcCCceEEEEec
Confidence                 223444444  367776653

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.71  E-value=0.02  Score=46.27  Aligned_cols=99  Identities=11%  Similarity=0.079  Sum_probs=67.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCE--EEeCCCCChhhhccCc
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADK--VIDYRKTKYEDIEEKF  213 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~  213 (327)
                      .+....++++++||-+| ||. |..+..+++.....+++.++.+++..+.+++    .+.+.  ++..+..........+
T Consensus        32 ~l~~l~~~~~~~vLDiG-~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~  109 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIG-AGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDP  109 (204)
T ss_dssp             HHHHTTCCTTCEEEEET-CTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCC
T ss_pred             HHHHcCCCCCCEEEEEC-CCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCC
Confidence            44667889999999999 775 8888888887434788888899888777754    34332  2222222222223569


Q ss_pred             cEEEeCCC--Cc----hhhhhhhcCCCcEEEee
Q 020320          214 DVLYDTIG--DC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       214 d~v~d~~g--~~----~~~~~~l~~~g~~v~~g  240 (327)
                      |+++....  ..    ..+.+.|+++|+++...
T Consensus       110 D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (204)
T 3e05_A          110 DRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA  142 (204)
T ss_dssp             SEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            99996653  22    55678899999988754

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.67  E-value=0.022  Score=48.91  Aligned_cols=74  Identities=14%  Similarity=0.186  Sum_probs=51.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc----CCCEE-EeCCC-CChhhhccCccEEEeC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL----GADKV-IDYRK-TKYEDIEEKFDVLYDT  219 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~----g~~~v-~~~~~-~~~~~~~~~~d~v~d~  219 (327)
                      -.+++++|+|++|++|.+++..+... |++++++.+++++.+.+ +++    +...+ .+..+ +........+|+++++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            46789999999999999998888888 88887777877665433 333    32222 23222 2233345679999999


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      +|
T Consensus       196 ag  197 (287)
T 1lu9_A          196 GA  197 (287)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.63  E-value=0.038  Score=44.80  Aligned_cols=97  Identities=10%  Similarity=0.178  Sum_probs=67.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC-E--EEeCCCCChhhhccC
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD-K--VIDYRKTKYEDIEEK  212 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~-~--v~~~~~~~~~~~~~~  212 (327)
                      .+....+.++++||-+| ||. |..+..+++.  +.+++.++.+++..+.+++    +|.+ .  ++..+..+.......
T Consensus        47 ~l~~l~~~~~~~vLDlG-cG~-G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~  122 (204)
T 3njr_A           47 TLAALAPRRGELLWDIG-GGS-GSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPL  122 (204)
T ss_dssp             HHHHHCCCTTCEEEEET-CTT-CHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCC
T ss_pred             HHHhcCCCCCCEEEEec-CCC-CHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCC
Confidence            44567788999999999 776 8888888886  7889999999988777654    4544 2  233322222222347


Q ss_pred             ccEEEeCCCC-c---hhhhhhhcCCCcEEEee
Q 020320          213 FDVLYDTIGD-C---KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       213 ~d~v~d~~g~-~---~~~~~~l~~~g~~v~~g  240 (327)
                      +|+++...+. .   ..+.+.|+++|+++...
T Consensus       123 ~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~  154 (204)
T 3njr_A          123 PEAVFIGGGGSQALYDRLWEWLAPGTRIVANA  154 (204)
T ss_dssp             CSEEEECSCCCHHHHHHHHHHSCTTCEEEEEE
T ss_pred             CCEEEECCcccHHHHHHHHHhcCCCcEEEEEe
Confidence            9999965442 2   45567899999987754

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.62  E-value=0.013  Score=49.35  Aligned_cols=72  Identities=19%  Similarity=0.326  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh---hh-------ccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE---DI-------EEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~~-------~~~~d~v~  217 (327)
                      .++++||+||+|++|.+.+..+... |++++++.+++++.+..++++. ..+..+-.+..   ..       ..++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999988888877 9999988887766444455542 33322222221   11       14789999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      +++|
T Consensus        83 ~~Ag   86 (256)
T 2d1y_A           83 NNAA   86 (256)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.61  E-value=0.0082  Score=50.37  Aligned_cols=73  Identities=21%  Similarity=0.401  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc--cHHHHHHcCCCEEE---eCCCCChhhh---ccCccEEEeC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP--KVEFVKELGADKVI---DYRKTKYEDI---EEKFDVLYDT  219 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~--~~~~~~~~g~~~v~---~~~~~~~~~~---~~~~d~v~d~  219 (327)
                      .|+++||+||++++|.+.++.+... |+++++..++.+  ..+.+++.|.....   |-.+....+.   ..++|+++++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN   86 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAA-GAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNN   86 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHc-CCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            5899999999999999988888888 999999987643  34455666654322   2222111111   1479999999


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      +|
T Consensus        87 AG   88 (247)
T 4hp8_A           87 AG   88 (247)
T ss_dssp             CC
T ss_pred             CC
Confidence            88

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.58  E-value=0.014  Score=48.52  Aligned_cols=73  Identities=16%  Similarity=0.288  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhh---hc---cCccEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYED---IE---EKFDVLYDTI  220 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~---~~---~~~d~v~d~~  220 (327)
                      .+++++|+||+|.+|.+.++.+... |.+++++.+++++.+.+ +++....++..+-.+...   ..   .++|++++++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A   84 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECC
Confidence            5789999999999999998888877 99999888887765544 334322333222222221   12   3689999998


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        85 g   85 (244)
T 3d3w_A           85 A   85 (244)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.49  E-value=0.013  Score=49.14  Aligned_cols=73  Identities=16%  Similarity=0.282  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEE-eCCCCChhh---h-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVI-DYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~-~~~~~~~~~---~-------~~~~d~  215 (327)
                      .++++||+||++++|.++++.+... |+++++..+++++.+.+ ++++..... ..+-.+..+   .       ..++|+
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAAD-GATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            5789999999999999998888887 99999888887765444 456644322 111112111   1       147999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        84 lv~nAg   89 (247)
T 3rwb_A           84 LVNNAS   89 (247)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999988

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.46  E-value=0.0085  Score=50.61  Aligned_cols=73  Identities=21%  Similarity=0.213  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEEe-CCCCChhh----------hccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVID-YRKTKYED----------IEEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~~-~~~~~~~~----------~~~~  212 (327)
                      .|+++||+||++++|.+.++.+... |+++++..+++++.+.+    ++.|.+.... .+-.+..+          ...+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAA-GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            5899999999999999988888877 99999998887765433    3345443221 11111111          1247


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        87 iDiLVNNAG   95 (255)
T 4g81_D           87 VDILINNAG   95 (255)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999988

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.45  E-value=0.019  Score=45.04  Aligned_cols=98  Identities=16%  Similarity=0.221  Sum_probs=66.3

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC-EE-EeCCCCChhhhc-cCc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD-KV-IDYRKTKYEDIE-EKF  213 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~-~v-~~~~~~~~~~~~-~~~  213 (327)
                      +....+.++++||-+| ||. |..+..+++...+.+++.++.+++..+.+++    .+.+ .+ +..+........ ..+
T Consensus        18 ~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   95 (178)
T 3hm2_A           18 ISALAPKPHETLWDIG-GGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNP   95 (178)
T ss_dssp             HHHHCCCTTEEEEEES-TTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCC
T ss_pred             HHHhcccCCCeEEEeC-CCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCC
Confidence            4556788999999999 776 8888999988646678888888887777754    4543 22 222221111222 579


Q ss_pred             cEEEeCCC--C---chhhhhhhcCCCcEEEee
Q 020320          214 DVLYDTIG--D---CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       214 d~v~d~~g--~---~~~~~~~l~~~g~~v~~g  240 (327)
                      |+++....  .   ...+.+.|+++|+++...
T Consensus        96 D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  127 (178)
T 3hm2_A           96 DVIFIGGGLTAPGVFAAAWKRLPVGGRLVANA  127 (178)
T ss_dssp             SEEEECC-TTCTTHHHHHHHTCCTTCEEEEEE
T ss_pred             CEEEECCcccHHHHHHHHHHhcCCCCEEEEEe
Confidence            99996543  2   256678899999987654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.45  E-value=0.003  Score=52.92  Aligned_cols=76  Identities=20%  Similarity=0.359  Sum_probs=50.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCCC----hhhhccCccEEEeC
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKTK----YEDIEEKFDVLYDT  219 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~~----~~~~~~~~d~v~d~  219 (327)
                      .+-.|+++||+||++++|.++++.+... |+++++..+++++.+....-....+ .|-.+.+    +.+...++|+++++
T Consensus         7 dlf~GK~alVTGas~GIG~aia~~la~~-Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNN   85 (242)
T 4b79_A            7 DIYAGQQVLVTGGSSGIGAAIAMQFAEL-GAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNN   85 (242)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            3457999999999999999988888888 9999999988776543211111111 1211111    11123689999999


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      +|
T Consensus        86 AG   87 (242)
T 4b79_A           86 AG   87 (242)
T ss_dssp             CC
T ss_pred             CC
Confidence            88

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.44  E-value=0.032  Score=47.49  Aligned_cols=95  Identities=19%  Similarity=0.205  Sum_probs=65.6

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++...+...++.... -.|++++|+|+++.+|..++.++... |+++.+.-+.                   ..+..
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~-------------------t~~L~  199 (285)
T 3l07_A          140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-KATVTTCHRF-------------------TTDLK  199 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTT-------------------CSSHH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCC-------------------chhHH
Confidence            345555445555555443 48999999997677899999999998 8876544322                   12344


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      +..+.+|+++.++|..+ -.-..++++..++.+|...
T Consensus       200 ~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          200 SHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             HHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCEE
T ss_pred             HhcccCCEEEECCCCCCCCCHHHcCCCcEEEEecccC
Confidence            55678999999998652 2235578888888887654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.44  E-value=0.017  Score=48.57  Aligned_cols=42  Identities=21%  Similarity=0.267  Sum_probs=35.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .++++||+||++++|.++++.+... |++++++.+++++.+.+
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   47 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKV   47 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999988888877 99999999887765444

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.42  E-value=0.026  Score=47.67  Aligned_cols=73  Identities=18%  Similarity=0.261  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH---HcCCCE-EEeCCCCChhh----------hccCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK---ELGADK-VIDYRKTKYED----------IEEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~---~~g~~~-v~~~~~~~~~~----------~~~~~  213 (327)
                      .|+.+||+||++++|.++++.+... |+++++..+++++.+.++   +.+... .+.-+-.+..+          ...++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~-Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEE-RAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999988777777 999999998777655443   334322 22111111111          12579


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus        85 DiLVNnAG   92 (258)
T 4gkb_A           85 DGLVNNAG   92 (258)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.42  E-value=0.022  Score=48.16  Aligned_cols=94  Identities=12%  Similarity=0.113  Sum_probs=66.0

Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320          129 SLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED  208 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (327)
                      +.|++....+..++..+ -.|++++|+|+++.+|..++.++... |+++.+..+.                   ..+..+
T Consensus       131 ~~PcTp~gv~~lL~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~-gAtVtv~~~~-------------------t~~L~~  189 (276)
T 3ngx_A          131 LVPATPRAVIDIMDYYG-YHENTVTIVNRSPVVGRPLSMMLLNR-NYTVSVCHSK-------------------TKDIGS  189 (276)
T ss_dssp             SCCHHHHHHHHHHHHHT-CCSCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTT-------------------CSCHHH
T ss_pred             CCCCcHHHHHHHHHHhC-cCCCEEEEEcCChHHHHHHHHHHHHC-CCeEEEEeCC-------------------cccHHH
Confidence            34555444555566555 78999999997777999999999988 8876655432                   233445


Q ss_pred             hccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          209 IEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       209 ~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ..+.+|+++.++|..+ -.-..++++..++.+|...
T Consensus       190 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          190 MTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINY  225 (276)
T ss_dssp             HHHHSSEEEECSSCTTCBCGGGCCTTCEEEECCCEE
T ss_pred             hhccCCEEEECCCCCccccHhhccCCcEEEEeccCc
Confidence            5567899999998652 2234568888888887654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.42  E-value=0.0039  Score=51.91  Aligned_cols=74  Identities=16%  Similarity=0.318  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g~  222 (327)
                      .+++++|+||+|.+|.+++..+... |.  +++++.+++++......-+...+. |-.+ +.+.....++|++++++|.
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~   94 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   94 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcC-CCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence            3678999999999999998888877 88  888888876543221111222221 2111 2333445689999999984

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.41  E-value=0.028  Score=48.37  Aligned_cols=73  Identities=19%  Similarity=0.303  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-HHHH----HHcCCCEE-EeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFV----KELGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-~~~~----~~~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||+|++|.++++.+... |++++++.+++++ .+.+    ++.+.... +..+-.+...   .       ..
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKE-GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988888877 9999988876553 2222    33444332 2222222211   1       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       125 ~iD~lvnnAg  134 (291)
T 3ijr_A          125 SLNILVNNVA  134 (291)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999876

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.40  E-value=0.01  Score=44.91  Aligned_cols=72  Identities=19%  Similarity=0.199  Sum_probs=54.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh--hhh--ccCccEEEeCCCCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY--EDI--EEKFDVLYDTIGDC  223 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~~--~~~~d~v~d~~g~~  223 (327)
                      .++++|+| +|.+|...++.+... |.+++++++++++.+.+++.+...+. .+..+.  ...  ..++|.++.+++..
T Consensus         6 ~~~v~I~G-~G~iG~~la~~L~~~-g~~V~~id~~~~~~~~~~~~~~~~~~-gd~~~~~~l~~~~~~~~d~vi~~~~~~   81 (141)
T 3llv_A            6 RYEYIVIG-SEAAGVGLVRELTAA-GKKVLAVDKSKEKIELLEDEGFDAVI-ADPTDESFYRSLDLEGVSAVLITGSDD   81 (141)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTTCEEEE-CCTTCHHHHHHSCCTTCSEEEECCSCH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHCCCcEEE-CCCCCHHHHHhCCcccCCEEEEecCCH
Confidence            46899999 799999999999988 99999999999988888877765433 222222  121  35799999998853

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.39  E-value=0.012  Score=49.25  Aligned_cols=76  Identities=21%  Similarity=0.389  Sum_probs=52.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEe-CCCCChhh------hccCccEE
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVID-YRKTKYED------IEEKFDVL  216 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~-~~~~~~~~------~~~~~d~v  216 (327)
                      ...+++++||+||+|++|.+.+..+... |.+++++.+++++.+.+ +++.....+. .+-.+...      ...++|++
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l   88 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKL-GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDIL   88 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            3467899999999999999988888777 99999999888776554 4454332221 11122111      12479999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++|
T Consensus        89 i~~Ag   93 (249)
T 3f9i_A           89 VCNAG   93 (249)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.39  E-value=0.039  Score=46.95  Aligned_cols=94  Identities=17%  Similarity=0.124  Sum_probs=65.8

Q ss_pred             cchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320          130 LPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED  208 (327)
Q Consensus       130 ~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (327)
                      .|++...++..++..+. -.|++++|+|+++.+|..++.++... |+++.+.-+..                   .+..+
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-gAtVtv~hs~T-------------------~~L~~  200 (286)
T 4a5o_A          141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-GCTVTVTHRFT-------------------RDLAD  200 (286)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-TCEEEEECTTC-------------------SCHHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCC-------------------cCHHH
Confidence            45554445555555443 47999999997777999999999988 88766553321                   23445


Q ss_pred             hccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          209 IEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       209 ~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ..+.+|+++.++|..+ -.-..++++..++.+|...
T Consensus       201 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          201 HVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             HHHTCSEEEECCCCTTCBCGGGSCTTCEEEECCSCS
T ss_pred             HhccCCEEEECCCCCCCCCHHHcCCCeEEEEecccc
Confidence            5667899999998652 2335578888888998765

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.36  E-value=0.017  Score=51.05  Aligned_cols=86  Identities=30%  Similarity=0.335  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|++|.|+| .|.+|...++.++.+ |.++++..+++...+.+.++|...+     .++.+.+...|+++-++...    
T Consensus       163 ~gktvGIIG-~G~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~~aDvV~l~~Plt~~t~  235 (351)
T 3jtm_A          163 EGKTIGTVG-AGRIGKLLLQRLKPF-GCNLLYHDRLQMAPELEKETGAKFV-----EDLNEMLPKCDVIVINMPLTEKTR  235 (351)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-CCEEEEECSSCCCHHHHHHHCCEEC-----SCHHHHGGGCSEEEECSCCCTTTT
T ss_pred             cCCEEeEEE-eCHHHHHHHHHHHHC-CCEEEEeCCCccCHHHHHhCCCeEc-----CCHHHHHhcCCEEEECCCCCHHHH
Confidence            588999999 999999999999998 9998888888777777777886432     24556677899999887621    


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          ...+..|+++..++.++
T Consensus       236 ~li~~~~l~~mk~gailIN~a  256 (351)
T 3jtm_A          236 GMFNKELIGKLKKGVLIVNNA  256 (351)
T ss_dssp             TCBSHHHHHHSCTTEEEEECS
T ss_pred             HhhcHHHHhcCCCCCEEEECc
Confidence                45567888888888775

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.36  E-value=0.024  Score=47.39  Aligned_cols=72  Identities=18%  Similarity=0.246  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChh---hh-------ccCccEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYE---DI-------EEKFDVL  216 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~---~~-------~~~~d~v  216 (327)
                      .+++++|+||+|++|.++++.+... |.+++++.+++++.+.+ ++++.. .+..+-.+..   ..       ..++|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAVGAH-PVVMDVADPASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTTCE-EEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCE-EEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999988888877 99999998887765544 345532 2222212211   11       1369999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++|
T Consensus        82 vn~Ag   86 (245)
T 1uls_A           82 VHYAG   86 (245)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.35  E-value=0.019  Score=48.85  Aligned_cols=73  Identities=18%  Similarity=0.251  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh---h-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~---~-------~~~~d~  215 (327)
                      .++++||+||++++|.+++..+... |++++++.+++++.+.+ ++++.... +..+-.+..+   .       ..++|+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARA-GARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988888777 99999999887776544 45553322 2111122111   1       137999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        89 lv~nAg   94 (271)
T 3tzq_B           89 VDNNAA   94 (271)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.34  E-value=0.039  Score=46.89  Aligned_cols=73  Identities=23%  Similarity=0.415  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-ccHHHH----HHcCCCEE-EeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFV----KELGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-~~~~~~----~~~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||++++|.+++..+... |++++++.++. ++.+.+    ++.+.... +..+-.+..+   .       ..
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALE-GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988887777 99988886543 433322    33454332 2222222211   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       109 ~iD~lvnnAg  118 (271)
T 3v2g_A          109 GLDILVNSAG  118 (271)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7999999987

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.31  E-value=0.03  Score=47.53  Aligned_cols=95  Identities=21%  Similarity=0.325  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC-cccHHH----HHHcCCCEE-EeCCCCChhh---h-------c
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS-TPKVEF----VKELGADKV-IDYRKTKYED---I-------E  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~-~~~~~~----~~~~g~~~v-~~~~~~~~~~---~-------~  210 (327)
                      -.++++||+||++++|.++++.+... |+++++..++ +++.+.    +++.+.... +..+-.+..+   .       .
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRL-GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999988888777 9999887754 333322    233454332 2222222211   1       1


Q ss_pred             cCccEEEeCCCCc----------------------------hhhhhhhcCCCcEEEeeCC
Q 020320          211 EKFDVLYDTIGDC----------------------------KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       211 ~~~d~v~d~~g~~----------------------------~~~~~~l~~~g~~v~~g~~  242 (327)
                      .++|++++++|..                            ...+..+.++|+++.++..
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  154 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN  154 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence            4789999998721                            1233456778999888653

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.30  E-value=0.016  Score=50.33  Aligned_cols=104  Identities=22%  Similarity=0.309  Sum_probs=74.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|.++.|+| .|.+|...++.++.+ |.++++..+++++ +.+.++|++..      ++.+.....|+++.++...    
T Consensus       141 ~g~~vgIiG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~~------~l~ell~~aDvV~l~~p~~~~t~  211 (307)
T 1wwk_A          141 EGKTIGIIG-FGRIGYQVAKIANAL-GMNILLYDPYPNE-ERAKEVNGKFV------DLETLLKESDVVTIHVPLVESTY  211 (307)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCH-HHHHHTTCEEC------CHHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCceEEEEc-cCHHHHHHHHHHHHC-CCEEEEECCCCCh-hhHhhcCcccc------CHHHHHhhCCEEEEecCCChHHh
Confidence            578999999 999999999999988 9999888887766 55677776421      3455567899999887621    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..+++++.++.++....          .+.   ..+.+.+++|.+.
T Consensus       212 ~li~~~~l~~mk~ga~lin~arg~~----------vd~---~aL~~aL~~g~i~  252 (307)
T 1wwk_A          212 HLINEERLKLMKKTAILINTSRGPV----------VDT---NALVKALKEGWIA  252 (307)
T ss_dssp             TCBCHHHHHHSCTTCEEEECSCGGG----------BCH---HHHHHHHHHTSSS
T ss_pred             hhcCHHHHhcCCCCeEEEECCCCcc----------cCH---HHHHHHHHhCCCc
Confidence                245677889988888864221          122   3455667777664

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.29  E-value=0.019  Score=49.09  Aligned_cols=73  Identities=25%  Similarity=0.389  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh---h-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~---~-------~~~~d~  215 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+ ++++.... +..+-.+..+   .       ..++|+
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKN-GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988888777 99999999887765444 45554332 2211122111   1       147999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus       105 lv~nAg  110 (277)
T 4dqx_A          105 LVNNAG  110 (277)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999988

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.27  E-value=0.021  Score=48.19  Aligned_cols=73  Identities=19%  Similarity=0.346  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChh---hh-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYE---DI-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~---~~-------~~~~d~  215 (327)
                      .++++||+||+|++|.++++.+... |+++++..+++++.+.+ ++++.... +..+-.+..   ..       ..++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVRE-GATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988887777 99999998887765444 45554322 221212211   11       137999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        86 lv~~Ag   91 (259)
T 4e6p_A           86 LVNNAA   91 (259)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999988

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.27  E-value=0.015  Score=49.34  Aligned_cols=74  Identities=23%  Similarity=0.391  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh---h-------ccCcc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED---I-------EEKFD  214 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~---~-------~~~~d  214 (327)
                      -.++++||+||+|++|.+++..+... |+++++..+++++.+.+ ++++.... +..+-.+..+   .       ..++|
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  103 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQ-GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID  103 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            35789999999999999988888877 99999988887765444 55665432 2222222211   1       14799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus       104 ~lvnnAg  110 (266)
T 3grp_A          104 ILVNNAG  110 (266)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.25  E-value=0.0062  Score=49.98  Aligned_cols=92  Identities=10%  Similarity=0.039  Sum_probs=58.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-hhcCCcEEEEeCCcc-cHHHHHHcCCC-EEEeCCCC---ChhhhccCccEEEeCCCCc
Q 020320          150 QTIFIVGGAGGVGTLVIQLAK-HFYGASHVVATTSTP-KVEFVKELGAD-KVIDYRKT---KYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~-~~~g~~~v~~~~~~~-~~~~~~~~g~~-~v~~~~~~---~~~~~~~~~d~v~d~~g~~  223 (327)
                      ++++|+||+|.+|.++++.+. .. |.++++..++++ +.+.+...+.. .++..+-.   .+.....++|++++++|..
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYT-DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            469999999999999888777 66 999999998876 55444222222 12222222   2233457899999999852


Q ss_pred             ----hhhhhhhcC--CCcEEEeeCC
Q 020320          224 ----KNSFVVAKD--NAPIVDITWP  242 (327)
Q Consensus       224 ----~~~~~~l~~--~g~~v~~g~~  242 (327)
                          ...+..++.  .++++.++..
T Consensus        85 n~~~~~~~~~~~~~~~~~iv~iSs~  109 (221)
T 3r6d_A           85 GSDMASIVKALSRXNIRRVIGVSMA  109 (221)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred             ChhHHHHHHHHHhcCCCeEEEEeec
Confidence                233333432  3577777543

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.24  E-value=0.017  Score=53.14  Aligned_cols=89  Identities=21%  Similarity=0.255  Sum_probs=68.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      .-.|++|.|+| .|.+|..+++.++.+ |.++++..+++.+...+.+.|.. +     .++.+.+...|+++-+.+..  
T Consensus       254 ~l~GktVgIIG-~G~IG~~vA~~l~~~-G~~Viv~d~~~~~~~~a~~~g~~-~-----~~l~ell~~aDiVi~~~~t~~l  325 (479)
T 1v8b_A          254 LISGKIVVICG-YGDVGKGCASSMKGL-GARVYITEIDPICAIQAVMEGFN-V-----VTLDEIVDKGDFFITCTGNVDV  325 (479)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSCHHHHHHHHTTTCE-E-----CCHHHHTTTCSEEEECCSSSSS
T ss_pred             ccCCCEEEEEe-eCHHHHHHHHHHHhC-cCEEEEEeCChhhHHHHHHcCCE-e-----cCHHHHHhcCCEEEECCChhhh
Confidence            45789999999 999999999999998 99999998887765445555653 2     23556677899999886532  


Q ss_pred             --hhhhhhhcCCCcEEEeeCC
Q 020320          224 --KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       224 --~~~~~~l~~~g~~v~~g~~  242 (327)
                        ...+..|+++..++.++..
T Consensus       326 I~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          326 IKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             BCHHHHTTCCTTCEEEECSST
T ss_pred             cCHHHHhhcCCCcEEEEeCCC
Confidence              3566788999988888643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.23  E-value=0.012  Score=49.64  Aligned_cols=74  Identities=16%  Similarity=0.302  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh----------hccCcc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED----------IEEKFD  214 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~----------~~~~~d  214 (327)
                      -.++++||+||++++|.++++.+... |++++++.+++++.+.+ ++++.... +..+-.+..+          ...++|
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEG-GAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            35789999999999999988888777 99999999888766554 44553322 2222222211          114799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus        85 ~lv~nAg   91 (255)
T 4eso_A           85 LLHINAG   91 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.22  E-value=0.015  Score=53.65  Aligned_cols=89  Identities=19%  Similarity=0.219  Sum_probs=67.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      .-.|++|.|+| .|.+|..+++.++.+ |.++++..+++.+...+...|...      .++.+.+...|+++-+++..  
T Consensus       274 ~L~GktVgIIG-~G~IG~~vA~~l~~~-G~~V~v~d~~~~~~~~a~~~G~~~------~~l~ell~~aDiVi~~~~t~~l  345 (494)
T 3d64_A          274 MIAGKIAVVAG-YGDVGKGCAQSLRGL-GATVWVTEIDPICALQAAMEGYRV------VTMEYAADKADIFVTATGNYHV  345 (494)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSCHHHHHHHHTTTCEE------CCHHHHTTTCSEEEECSSSSCS
T ss_pred             ccCCCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEEeCChHhHHHHHHcCCEe------CCHHHHHhcCCEEEECCCcccc
Confidence            45789999999 999999999999998 999999888876643344455532      13556677899999887632  


Q ss_pred             --hhhhhhhcCCCcEEEeeCC
Q 020320          224 --KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       224 --~~~~~~l~~~g~~v~~g~~  242 (327)
                        ...+..|+++..++.++..
T Consensus       346 I~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          346 INHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             BCHHHHHHCCTTEEEEECSSS
T ss_pred             cCHHHHhhCCCCcEEEEcCCC
Confidence              4567888999888887643

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.22  E-value=0.027  Score=47.17  Aligned_cols=73  Identities=23%  Similarity=0.401  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-ccHH-HHHHcCCCEE-EeCCCCChhh---h-------ccCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVE-FVKELGADKV-IDYRKTKYED---I-------EEKFD  214 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-~~~~-~~~~~g~~~v-~~~~~~~~~~---~-------~~~~d  214 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++ ++.+ .+++.+.... +..+-.+...   .       ..++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999988888877 99999888876 5443 3445554322 2211122111   1       24799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus        85 ~lv~nAg   91 (249)
T 2ew8_A           85 ILVNNAG   91 (249)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.21  E-value=0.022  Score=47.72  Aligned_cols=71  Identities=17%  Similarity=0.331  Sum_probs=49.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCChhhh---ccCccEEEeCCC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTKYEDI---EEKFDVLYDTIG  221 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~---~~~~d~v~d~~g  221 (327)
                      ...++++||+||+|++|.+++..+... |++++++.++++   .+++++....+ |- ..+....   ..++|++++++|
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~---~~~~~~~~~~~~D~-~~~~~~~~~~~~~iD~lv~~Ag   90 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQE-GAEVTICARNEE---LLKRSGHRYVVCDL-RKDLDLLFEKVKEVDILVLNAG   90 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHH---HHHHTCSEEEECCT-TTCHHHHHHHSCCCSEEEECCC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHH---HHHhhCCeEEEeeH-HHHHHHHHHHhcCCCEEEECCC
Confidence            356889999999999999988888877 999998888763   33445522222 21 2222222   237999999987

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.21  E-value=0.014  Score=49.21  Aligned_cols=73  Identities=29%  Similarity=0.346  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EEeCCCCChh---hh-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VIDYRKTKYE---DI-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~---~~-------~~~~d~  215 (327)
                      .++++||+||+|++|.++++.+... |++++++.+++++.+.+ ++++... .+..+-.+..   ..       ..++|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999998888877 99999998887765544 4444322 1211112211   11       137999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        83 lv~nAg   88 (254)
T 1hdc_A           83 LVNNAG   88 (254)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.21  E-value=0.026  Score=47.99  Aligned_cols=73  Identities=21%  Similarity=0.368  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhh---h-------ccCccEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYED---I-------EEKFDVL  216 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~---~-------~~~~d~v  216 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+ +++..-..+..+-.+..+   .       ..++|++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999988888877 99999988887766544 344321222222222211   1       1379999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++|
T Consensus        87 v~nAg   91 (270)
T 1yde_A           87 VNNAG   91 (270)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.20  E-value=0.02  Score=48.92  Aligned_cols=73  Identities=26%  Similarity=0.350  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh----------hccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED----------IEEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~----------~~~~~d~  215 (327)
                      .++++||+||++++|.+++..+... |++++++.+++++.+.+ ++++.... +..+-.+..+          ...++|+
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAE-GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4789999999999999988888877 99999999887766554 44554332 2112122211          1247899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        83 lvnnAg   88 (281)
T 3zv4_A           83 LIPNAG   88 (281)
T ss_dssp             EECCCC
T ss_pred             EEECCC
Confidence            999987

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.20  E-value=0.032  Score=47.57  Aligned_cols=73  Identities=22%  Similarity=0.330  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCE-EEeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADK-VIDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~-v~~~~~~~~~~---~-------~~~  212 (327)
                      .++++||+||++++|.+.++.+... |++++++.+++++.+.+ +   +.+... .+..+-.+..+   .       ..+
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEA-GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988888877 99999999887765443 2   233222 22222222211   1       137


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus       110 iD~lvnnAg  118 (276)
T 3r1i_A          110 IDIAVCNAG  118 (276)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.20  E-value=0.024  Score=47.76  Aligned_cols=73  Identities=25%  Similarity=0.342  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh---h-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~---~-------~~~~d~  215 (327)
                      .++++||+||++++|.++++.+... |.+++++.+++++.+.+ ++++.... +..+-.+..+   .       ..++|+
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKG-GAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4689999999999999988888877 99999999888776554 45554332 2212122211   1       137899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        87 li~~Ag   92 (261)
T 3n74_A           87 LVNNAG   92 (261)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.20  E-value=0.021  Score=46.43  Aligned_cols=99  Identities=20%  Similarity=0.160  Sum_probs=67.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC--CcEEEEeCCcccHHHHHH----cCCCEE--EeCCCCChhhhcc
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG--ASHVVATTSTPKVEFVKE----LGADKV--IDYRKTKYEDIEE  211 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g--~~~v~~~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~~~~  211 (327)
                      .+....+.++++||.+| || .|..+..+++.. +  .+++.++.+++..+.+++    .+.+.+  +..+.........
T Consensus        69 ~~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~  145 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIG-TG-CGYHAAVTAEIV-GEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLA  145 (215)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGC
T ss_pred             HHHhhCCCCCCEEEEEC-CC-ccHHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCC
Confidence            44567788999999999 77 588888999876 5  678888888887777754    343322  1111111111124


Q ss_pred             CccEEEeCCC--C-chhhhhhhcCCCcEEEeeC
Q 020320          212 KFDVLYDTIG--D-CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       212 ~~d~v~d~~g--~-~~~~~~~l~~~g~~v~~g~  241 (327)
                      .+|+++....  . ...+.+.|+++|+++..-.
T Consensus       146 ~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          146 PYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             CEEEEEESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CeeEEEECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence            6899997654  2 2677889999999887644

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.19  E-value=0.016  Score=48.75  Aligned_cols=73  Identities=22%  Similarity=0.263  Sum_probs=45.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EEeCCCCChhh---h-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VIDYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~---~-------~~~~d~  215 (327)
                      .++++||+||++++|.+++..+... |+++++..+++++.+.+ ++++... .+..+-.+..+   .       ..++|+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQE-GATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988888777 99999998877655433 4454322 22211122111   1       137999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        85 lv~nAg   90 (257)
T 3tpc_A           85 LVNCAG   90 (257)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.18  E-value=0.018  Score=50.12  Aligned_cols=97  Identities=18%  Similarity=0.264  Sum_probs=66.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc----CCCEEEeCCCCChhhhccCccEEE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL----GADKVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      ...++.++++||-+| ||. |..+..+++.. +.+++.++.+++..+.+++.    |...-+.....+..+....+|+|+
T Consensus        84 ~~~~~~~~~~vLDiG-cG~-G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~  160 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIG-CGW-GTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIV  160 (318)
T ss_dssp             TTSCCCTTCEEEEES-CTT-SHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEE
T ss_pred             HhcCCCCcCEEEEEc-ccc-hHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEE
Confidence            457788999999999 776 88888999987 88999999999988777653    322111111112222225799998


Q ss_pred             eC-----CCC------chhhhhhhcCCCcEEEeeC
Q 020320          218 DT-----IGD------CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       218 d~-----~g~------~~~~~~~l~~~g~~v~~g~  241 (327)
                      ..     .+.      ...+.+.|+|+|+++....
T Consensus       161 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          161 SIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             EESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             EeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            65     321      1445688999999987653

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.15  E-value=0.02  Score=51.01  Aligned_cols=87  Identities=21%  Similarity=0.247  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  223 (327)
                      .|.+|.|+| .|.+|...++.++.+ |.+ +++..+++.+.+.+.++|+..+     .++.+.+...|+++.++...   
T Consensus       163 ~g~tvgIIG-~G~IG~~vA~~l~~~-G~~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~aDvV~l~~P~t~~t  235 (364)
T 2j6i_A          163 EGKTIATIG-AGRIGYRVLERLVPF-NPKELLYYDYQALPKDAEEKVGARRV-----ENIEELVAQADIVTVNAPLHAGT  235 (364)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-CCSEEEEECSSCCCHHHHHHTTEEEC-----SSHHHHHHTCSEEEECCCCSTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhC-CCcEEEEECCCccchhHHHhcCcEec-----CCHHHHHhcCCEEEECCCCChHH
Confidence            688999999 999999999999998 997 8888887777777777775421     23555667899999887631   


Q ss_pred             -----hhhhhhhcCCCcEEEeeC
Q 020320          224 -----KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       224 -----~~~~~~l~~~g~~v~~g~  241 (327)
                           ...+..|++++.++.++.
T Consensus       236 ~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          236 KGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             TTCBCHHHHTTSCTTEEEEECSC
T ss_pred             HHHhCHHHHhhCCCCCEEEECCC
Confidence                 345677888888887753

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.13  E-value=0.012  Score=49.32  Aligned_cols=73  Identities=21%  Similarity=0.304  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh---h---hccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE---D---IEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~---~~~~~d~v~d~~g  221 (327)
                      .+++++|+||+|++|.+++..+... |.+++++.+++++.+.+.++..-..+..+-.+..   .   ...++|++++++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            4789999999999999988888877 9999998888765543333321112211112211   1   1357999999987

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.12  E-value=0.025  Score=47.03  Aligned_cols=70  Identities=19%  Similarity=0.300  Sum_probs=49.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCChhhh-------ccCccEEEeCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTKYEDI-------EEKFDVLYDTI  220 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~-------~~~~d~v~d~~  220 (327)
                      +++++|+||+|++|.+++..+... |.+++++.+++++  ..++++...+. |-.+.+....       ..++|+++++.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~-G~~V~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A   78 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVAR-GYRVAIASRNPEE--AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA   78 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHH--HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHH--HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence            578999999999999998888877 9999988887765  34455632221 2222222221       24799999998


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        79 g   79 (239)
T 2ekp_A           79 A   79 (239)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.12  E-value=0.03  Score=46.32  Aligned_cols=72  Identities=19%  Similarity=0.296  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H----HcCCCEE-EeCCCCChh---hh-------ccC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K----ELGADKV-IDYRKTKYE---DI-------EEK  212 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~----~~g~~~v-~~~~~~~~~---~~-------~~~  212 (327)
                      ++++||+||+|++|.+.++.+... |++++++.+++++.+.+ +    +.+.... +..+-.+..   ..       ..+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARD-GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999988888877 99999988887765443 2    3343332 211112211   11       137


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        81 id~li~~Ag   89 (235)
T 3l77_A           81 VDVVVANAG   89 (235)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.12  E-value=0.033  Score=46.84  Aligned_cols=73  Identities=27%  Similarity=0.290  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChh---hhc-------cCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYE---DIE-------EKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~---~~~-------~~~d~  215 (327)
                      .+++++|+||+|.+|.+++..+... |.+++++.+++++.+.+ ++++.... +..+-.+..   ...       .++|+
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            5689999999999999988888877 99999999877765443 45554322 221212211   111       37999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        90 li~~Ag   95 (265)
T 2o23_A           90 AVNCAG   95 (265)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.11  E-value=0.024  Score=49.80  Aligned_cols=104  Identities=21%  Similarity=0.253  Sum_probs=75.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..++..+ ..+.++|++.      .++.+.+...|+++.++...    
T Consensus       164 ~g~tvgIIG-lG~IG~~vA~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~------~~l~ell~~aDvV~l~~P~t~~t~  234 (335)
T 2g76_A          164 NGKTLGILG-LGRIGREVATRMQSF-GMKTIGYDPIISP-EVSASFGVQQ------LPLEEIWPLCDFITVHTPLLPSTT  234 (335)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSSCH-HHHHHTTCEE------CCHHHHGGGCSEEEECCCCCTTTT
T ss_pred             CcCEEEEEe-ECHHHHHHHHHHHHC-CCEEEEECCCcch-hhhhhcCcee------CCHHHHHhcCCEEEEecCCCHHHH
Confidence            578999999 999999999999988 9999888876655 4566777642      13556677899999887632    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..+++++.++.++....          .+   -+.+.+.+++|.+.
T Consensus       235 ~li~~~~l~~mk~gailIN~arg~v----------vd---~~aL~~aL~~g~i~  275 (335)
T 2g76_A          235 GLLNDNTFAQCKKGVRVVNCARGGI----------VD---EGALLRALQSGQCA  275 (335)
T ss_dssp             TSBCHHHHTTSCTTEEEEECSCTTS----------BC---HHHHHHHHHHTSEE
T ss_pred             HhhCHHHHhhCCCCcEEEECCCccc----------cC---HHHHHHHHHhCCcc
Confidence                246678889988888864221          11   23456667777764

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.11  E-value=0.014  Score=44.03  Aligned_cols=72  Identities=14%  Similarity=0.268  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh---hh-ccCccEEEeCCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE---DI-EEKFDVLYDTIGD  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~~-~~~~d~v~d~~g~  222 (327)
                      .+++++|+| +|.+|...++.++.. |.+++++++++++.+.+.+.+.. ++..+..+..   +. ..++|+++.+++.
T Consensus         5 ~~~~v~I~G-~G~iG~~~a~~l~~~-g~~v~~~d~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            5 KNKQFAVIG-LGRFGGSIVKELHRM-GHEVLAVDINEEKVNAYASYATH-AVIANATEENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHT-TCCCEEEESCHHHHHTTTTTCSE-EEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhCCE-EEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence            356799999 599999999999988 88888888887776655555543 3322222221   11 4579999999985

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.11  E-value=0.059  Score=45.87  Aligned_cols=94  Identities=18%  Similarity=0.185  Sum_probs=64.7

Q ss_pred             cchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320          130 LPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED  208 (327)
Q Consensus       130 ~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (327)
                      .|++...+...++... .-.|++++|+|+++.+|..++.++... |+++.+.-+..                   .+..+
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-gAtVtv~h~~t-------------------~~L~~  199 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-GATVSVCHIKT-------------------KDLSL  199 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTC-------------------SCHHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCc-------------------hhHHH
Confidence            4544444444555544 358999999997777999999999988 88765543321                   23445


Q ss_pred             hccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          209 IEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       209 ~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      ..+.+|+++.++|..+ -.-..++++..++.+|...
T Consensus       200 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          200 YTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             HHTTCSEEEECSSCTTCBCGGGSCTTEEEEECCCEE
T ss_pred             HhhcCCEEEECCCCCCcCCHHHcCCCeEEEEeccCc
Confidence            5678999999998652 2235578888888888654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.11  E-value=0.018  Score=47.91  Aligned_cols=72  Identities=15%  Similarity=0.110  Sum_probs=49.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EEeCCCCChhh---h-------ccCccEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VIDYRKTKYED---I-------EEKFDVL  216 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~---~-------~~~~d~v  216 (327)
                      ++++||+||+|++|.+.+..+... |++++++.+++++.+.+ ++++... .+..+-.+..+   .       ..++|++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVER-GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            578999999999999988877777 99999999988776554 3343221 12111122111   1       1478999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++|
T Consensus        82 vnnAg   86 (235)
T 3l6e_A           82 LHCAG   86 (235)
T ss_dssp             EEECC
T ss_pred             EECCC
Confidence            99887

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.10  E-value=0.021  Score=49.18  Aligned_cols=73  Identities=25%  Similarity=0.403  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc---CCCEE--EeCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL---GADKV--IDYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~---g~~~v--~~~~~~~~~~----------~~~  211 (327)
                      .++++||+||+|++|.++++.+... |++++++.+++++.+.+ +++   +...+  +..+-.+..+          ...
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARA-GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988888777 99999999887765443 333   21111  2222222211          124


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       119 ~iD~lvnnAg  128 (293)
T 3rih_A          119 ALDVVCANAG  128 (293)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.09  E-value=0.039  Score=45.75  Aligned_cols=73  Identities=16%  Similarity=0.244  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChh---hhc---cCccEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYE---DIE---EKFDVLYDTI  220 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~---~~~---~~~d~v~d~~  220 (327)
                      .+++++|+||+|.+|.+.++.+... |.+++++.+++++.+.+ ++.....++..+-.+..   ...   .++|++++++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A   84 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA   84 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence            5689999999999999998888877 99999888887765444 33322222322222221   122   3589999998


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        85 g   85 (244)
T 1cyd_A           85 A   85 (244)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.09  E-value=0.029  Score=47.29  Aligned_cols=73  Identities=19%  Similarity=0.321  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc----CCCEE-EeCCCCChh---hh-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL----GADKV-IDYRKTKYE---DI-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~----g~~~v-~~~~~~~~~---~~-------~~  211 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+ +++    +.... +..+-.+..   ..       ..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKE-GAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999988888877 99999988887765433 222    43322 211112221   11       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        85 ~id~lv~~Ag   94 (263)
T 3ai3_A           85 GADILVNNAG   94 (263)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.09  E-value=0.0053  Score=50.33  Aligned_cols=68  Identities=16%  Similarity=0.239  Sum_probs=48.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC----hhhhccCccEEEeCCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK----YEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~~~~~~d~v~d~~g~  222 (327)
                      +|+|+||+|.+|..++..+... |.+++++++++++....  .+.. ++..+-.+    +.....++|++|.++|.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~--~~~~-~~~~D~~d~~~~~~~~~~~~d~vi~~ag~   73 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKVEQVPQY--NNVK-AVHFDVDWTPEEMAKQLHGMDAIINVSGS   73 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTS-SCEEEEEESSGGGSCCC--TTEE-EEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCccchhhc--CCce-EEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence            6999999999999999988887 89999999887654322  1222 22222222    33345789999999883

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.08  E-value=0.029  Score=47.56  Aligned_cols=74  Identities=23%  Similarity=0.403  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH----cCCCEE-EeCCCCChhh---h-------c
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE----LGADKV-IDYRKTKYED---I-------E  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~----~g~~~v-~~~~~~~~~~---~-------~  210 (327)
                      -.++++||+||+|++|.+++..+... |++++++.+++++.+.+ ++    .+.... +..+-.+..+   .       .
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999988888877 99999988887665433 22    254322 2111122111   1       1


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus        98 g~iD~lvnnAg  108 (267)
T 1vl8_A           98 GKLDTVVNAAG  108 (267)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.08  E-value=0.01  Score=49.91  Aligned_cols=70  Identities=11%  Similarity=-0.055  Sum_probs=48.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH---HcCCCEEEeCCCCChhhh-------ccCccEEEeC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK---ELGADKVIDYRKTKYEDI-------EEKFDVLYDT  219 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~-------~~~~d~v~d~  219 (327)
                      +++||+||+|++|.++++.+... |++++++.+++++.+.+.   +.+.+.... +..+....       ..++|+++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~~~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEAFAETYPQLKPM-SEQEPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHHHHCTTSEEC-CCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-CHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            47899999999999998888877 999988888777655443   234332221 33333322       1479999998


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      +|
T Consensus        80 Ag   81 (254)
T 1zmt_A           80 DI   81 (254)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.08  E-value=0.0071  Score=48.98  Aligned_cols=130  Identities=16%  Similarity=0.175  Sum_probs=73.3

Q ss_pred             ceeeEEE-eeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe
Q 020320          103 ALAEFIV-VEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT  181 (327)
Q Consensus       103 ~~~~~~~-v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~  181 (327)
                      .|.+|.. .+....+.+++++.+..+.. +.. ......+. ..+.++++||-+| ||. |..+..+++. +..+++.++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~-~~~~~~l~-~~~~~~~~vLDiG-~G~-G~~~~~l~~~-~~~~v~~vD   90 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-QTT-QLAMLGIE-RAMVKPLTVADVG-TGS-GILAIAAHKL-GAKSVLATD   90 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-HHH-HHHHHHHH-HHCSSCCEEEEET-CTT-SHHHHHHHHT-TCSEEEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-ccH-HHHHHHHH-HhccCCCEEEEEC-CCC-CHHHHHHHHC-CCCEEEEEE
Confidence            4556655 55666777777665544321 111 01111222 2256889999998 776 7777777774 244788888


Q ss_pred             CCcccHHHHHH----cCCC--EEEeCCCCChhhhccCccEEEeCCCC------chhhhhhhcCCCcEEEee
Q 020320          182 TSTPKVEFVKE----LGAD--KVIDYRKTKYEDIEEKFDVLYDTIGD------CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       182 ~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~d~v~d~~g~------~~~~~~~l~~~g~~v~~g  240 (327)
                      .++...+.+++    .+..  .++..+-.++  ....+|+++.....      ...+.+.|+++|.++..+
T Consensus        91 ~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  159 (205)
T 3grz_A           91 ISDESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG  159 (205)
T ss_dssp             SCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            88887777754    3433  2222222111  12578999865431      255667889999887743

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.08  E-value=0.017  Score=49.34  Aligned_cols=73  Identities=15%  Similarity=0.239  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EEeCCCCChhh----------hccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VIDYRKTKYED----------IEEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~----------~~~~~d~  215 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+ ++++... .+.-+-.+...          ...++|+
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADE-GCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988887777 99999999887765544 4555332 22222222211          1147999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus       107 lvnnAg  112 (277)
T 3gvc_A          107 LVANAG  112 (277)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.08  E-value=0.021  Score=48.24  Aligned_cols=73  Identities=22%  Similarity=0.389  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cC-CCE-EEeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LG-ADK-VIDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g-~~~-v~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+ ++   .+ ... .+..+-.+..+   .       ..
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARA-GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999988888777 99999999887765443 22   33 121 22222222211   1       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        88 ~id~lvnnAg   97 (262)
T 3pk0_A           88 GIDVVCANAG   97 (262)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.06  E-value=0.064  Score=46.12  Aligned_cols=73  Identities=16%  Similarity=0.214  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc--cHHH----HHHcCCCEEE-eCCCCChhh----------hc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP--KVEF----VKELGADKVI-DYRKTKYED----------IE  210 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~--~~~~----~~~~g~~~v~-~~~~~~~~~----------~~  210 (327)
                      .++++||+||++++|.+.+..+... |+++++..++.+  +.+.    +++.+....+ ..+-.+...          ..
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYARE-GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999988887777 999888876522  2222    2334543322 111122111          11


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|+++++.|
T Consensus       127 g~iD~lv~nAg  137 (294)
T 3r3s_A          127 GGLDILALVAG  137 (294)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.06  E-value=0.031  Score=47.33  Aligned_cols=73  Identities=18%  Similarity=0.256  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc-----CCCEE-EeCCCCChh---hh-------c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL-----GADKV-IDYRKTKYE---DI-------E  210 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~-----g~~~v-~~~~~~~~~---~~-------~  210 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+ +++     +.... +..+-.+..   ..       .
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999988888777 99999998887765433 222     43322 211212211   11       1


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus        91 g~id~lv~nAg  101 (267)
T 1iy8_A           91 GRIDGFFNNAG  101 (267)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37899999987

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.05  E-value=0.023  Score=47.89  Aligned_cols=73  Identities=21%  Similarity=0.354  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-Hc---CCCEE-EeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-EL---GADKV-IDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~---g~~~v-~~~~~~~~~~---~-------~~~  212 (327)
                      .++++||+||++++|.++++.+... |++++++.+++++.+.+. ++   +.... +..+-.+..+   .       ..+
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKE-GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999988888877 999999988887665543 33   32221 2111122111   1       147


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        84 id~lv~nAg   92 (257)
T 3imf_A           84 IDILINNAA   92 (257)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.05  E-value=0.032  Score=48.27  Aligned_cols=74  Identities=22%  Similarity=0.366  Sum_probs=50.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCEE-EeCCCCChhh---h-------cc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      -.++++||+||+|++|.+.+..+... |++++++.+++++.+.+ +   +.+.... +..+-.+...   .       ..
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARR-GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            46789999999999999988888777 99999999887765544 2   2343322 2222222211   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       108 ~id~lvnnAg  117 (301)
T 3tjr_A          108 GVDVVFSNAG  117 (301)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.03  E-value=0.027  Score=47.98  Aligned_cols=74  Identities=20%  Similarity=0.306  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EEeCCCCChhh---h-------ccCcc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VIDYRKTKYED---I-------EEKFD  214 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~---~-------~~~~d  214 (327)
                      ..++++||+||++++|.+++..+... |++++++.+++++.+.+ ++++... .+..+-.+..+   .       ..++|
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGA-GYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            35789999999999999988888777 99999998887765444 4555322 22222222211   1       14799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus       105 ~lVnnAg  111 (272)
T 4dyv_A          105 VLFNNAG  111 (272)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.03  E-value=0.031  Score=46.54  Aligned_cols=43  Identities=26%  Similarity=0.393  Sum_probs=36.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      -.+++++|+||+|++|.+++..+... |++++++.+++++.+.+
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   54 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAH-GASVVLLGRTEASLAEV   54 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEecCHHHHHHH
Confidence            35789999999999999988888777 99999999887765544

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.03  E-value=0.029  Score=46.94  Aligned_cols=73  Identities=21%  Similarity=0.355  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCEE-EeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADKV-IDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~v-~~~~~~~~~~---~-------~~~  212 (327)
                      .+++++|+||+|++|.+++..+... |++++++.+++++.+.+ ++   .+.... +..+-.+..+   .       ..+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAE-GAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999988888877 99999988887765443 22   243322 2212122111   1       147


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        85 id~lv~nAg   93 (247)
T 2jah_A           85 LDILVNNAG   93 (247)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.02  E-value=0.033  Score=47.69  Aligned_cols=73  Identities=16%  Similarity=0.255  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc---CCCEE-EeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL---GADKV-IDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~---g~~~v-~~~~~~~~~~---~-------~~~  212 (327)
                      .++++||+||++++|.+++..+... |++++++.+++++.+.+ +++   +.... +..+-.+..+   .       ..+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAAD-GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999988887777 99999999887765444 333   32222 2222222211   1       147


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus       106 iD~lVnnAg  114 (283)
T 3v8b_A          106 LDIVVANAG  114 (283)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.01  E-value=0.023  Score=47.97  Aligned_cols=72  Identities=11%  Similarity=0.119  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHHcCCCEEEeCCCCChhh---h-------ccCccEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKELGADKVIDYRKTKYED---I-------EEKFDVL  216 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~---~-------~~~~d~v  216 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++. +.+++.+...+. .+-.+...   .       ..++|++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~-~Dv~~~~~v~~~~~~~~~~~g~iD~l  103 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEH-GHRVIISYRTEHASVTELRQAGAVALY-GDFSCETGIMAFIDLLKTQTSSLRAV  103 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESSCCHHHHHHHHHTCEEEE-CCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhcCCeEEE-CCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4688999999999999988888777 99999999877653 444555643322 22222211   1       1479999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++|
T Consensus       104 v~nAg  108 (260)
T 3gem_A          104 VHNAS  108 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.01  E-value=0.05  Score=46.85  Aligned_cols=74  Identities=16%  Similarity=0.163  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEEeCCCCChhh---h-------c
Q 020320          147 KTGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVIDYRKTKYED---I-------E  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~---~-------~  210 (327)
                      -.++++||+||+|  ++|.++++.+... |++++++.++++..+.+    ++.+....+..+-.+..+   .       .
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999999887  9999888877777 99999988887654443    334433333222222211   1       1


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus       107 g~iD~lVnnAG  117 (296)
T 3k31_A          107 GSLDFVVHAVA  117 (296)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.00  E-value=0.077  Score=45.47  Aligned_cols=95  Identities=19%  Similarity=0.175  Sum_probs=66.0

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++.......++..+. -.|.+++|+|++..+|.-++.++... |+++.+..+.                   ..+..
T Consensus       144 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~-------------------t~~L~  203 (301)
T 1a4i_A          144 FIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-NATVTTCHSK-------------------TAHLD  203 (301)
T ss_dssp             CCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTT-------------------CSSHH
T ss_pred             ccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-CCeEEEEECC-------------------cccHH
Confidence            445554444445555443 57899999996557899999999988 8876655322                   23455


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      +..+.+|++|.++|..+ -.-..++++..++.+|.+.
T Consensus       204 ~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          204 EEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             HHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCBC
T ss_pred             HHhccCCEEEECCCCcccCCHHHcCCCcEEEEccCCC
Confidence            56678999999999663 2234578899999998754

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=95.99  E-value=0.03  Score=46.81  Aligned_cols=73  Identities=21%  Similarity=0.289  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE--EEeCCCCChhh---h------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK--VIDYRKTKYED---I------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~--v~~~~~~~~~~---~------~~~~d~  215 (327)
                      .+++++|+||+|.+|.+.+..+... |.+++++.+++++.+.+ ++++...  .+..+-.+...   .      ..++|+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAAS-GARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            5689999999999999988888877 99999998887765443 4444322  22222122211   1      147899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        89 li~~Ag   94 (254)
T 2wsb_A           89 LVNSAG   94 (254)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=95.99  E-value=0.031  Score=47.57  Aligned_cols=73  Identities=21%  Similarity=0.347  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc---CCCE-EEeCCCCChhh---h------ccCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL---GADK-VIDYRKTKYED---I------EEKFD  214 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~---g~~~-v~~~~~~~~~~---~------~~~~d  214 (327)
                      .++++||+||++++|.++++.+... |++++++.+++...+.++++   +... .+..+-.+..+   .      ..++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARA-GAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            5789999999999999988888777 99988888665444444433   3221 12112222211   1      14799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus       109 ~lv~nAg  115 (273)
T 3uf0_A          109 VLVNNAG  115 (273)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=95.98  E-value=0.025  Score=47.96  Aligned_cols=73  Identities=21%  Similarity=0.397  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH----cCCCEE-E--eCCCCCh-hhh-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE----LGADKV-I--DYRKTKY-EDI-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~----~g~~~v-~--~~~~~~~-~~~-------~~  211 (327)
                      .++++||+||++++|.+++..+... |++++++.+++++.+.+ ++    .+.... +  |-.+.+. ...       ..
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAA-GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988888877 99999998887765443 22    343322 2  2222221 111       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        98 ~id~lv~nAg  107 (266)
T 4egf_A           98 GLDVLVNNAG  107 (266)
T ss_dssp             SCSEEEEECC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=95.98  E-value=0.019  Score=49.27  Aligned_cols=74  Identities=20%  Similarity=0.272  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEE-EeCCCCChhh---h---ccCccEEEe
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKV-IDYRKTKYED---I---EEKFDVLYD  218 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~~---~---~~~~d~v~d  218 (327)
                      -.|++++|+||+|++|.+++..+... |++++++.+++++.+.+. +++.... +..+-.+...   .   ..++|++++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~   92 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARR-GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN   92 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            35789999999999999988888877 999999999887766553 4443221 2111122221   1   247899999


Q ss_pred             CCC
Q 020320          219 TIG  221 (327)
Q Consensus       219 ~~g  221 (327)
                      ++|
T Consensus        93 nAg   95 (291)
T 3rd5_A           93 NAG   95 (291)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.97  E-value=0.034  Score=48.59  Aligned_cols=74  Identities=15%  Similarity=0.196  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-----cC--CCEE--EeCCC-CChhhhccCccEE
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-----LG--ADKV--IDYRK-TKYEDIEEKFDVL  216 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-----~g--~~~v--~~~~~-~~~~~~~~~~d~v  216 (327)
                      ..+.+|||+||+|.+|..++..+... |.++++++++.++.+.+.+     .+  ...+  .|-.+ ..+.....++|+|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            45789999999999999998888877 8999988887765543322     12  2222  12222 2233344689999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      |.+++
T Consensus        88 ih~A~   92 (342)
T 1y1p_A           88 AHIAS   92 (342)
T ss_dssp             EECCC
T ss_pred             EEeCC
Confidence            99987

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.97  E-value=0.03  Score=47.36  Aligned_cols=73  Identities=21%  Similarity=0.288  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EEeCCCCChhh---h-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VIDYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~---~-------~~~~d~  215 (327)
                      .+++++|+||+|++|.++++.+... |++++++.+++++.+.+ ++++... .+..+-.+..+   .       ..++|+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            4689999999999999988888877 99999999887766544 4444222 12111122111   1       136899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        84 lvnnAg   89 (263)
T 2a4k_A           84 VAHFAG   89 (263)
T ss_dssp             EEEGGG
T ss_pred             EEECCC
Confidence            999887

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=95.96  E-value=0.034  Score=46.52  Aligned_cols=74  Identities=22%  Similarity=0.265  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCE-EEeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADK-VIDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~-v~~~~~~~~~~---~-------~~~  212 (327)
                      .++++||+||+|++|.++++.+... |++++++.+++++.+.+ ++   .+... .+..+-.+..+   .       ..+
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALARE-GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988888877 99999998887765444 22   23322 22222222211   1       137


Q ss_pred             ccEEEeCCCC
Q 020320          213 FDVLYDTIGD  222 (327)
Q Consensus       213 ~d~v~d~~g~  222 (327)
                      +|++++++|.
T Consensus        87 id~li~~Ag~   96 (253)
T 3qiv_A           87 IDYLVNNAAI   96 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999873

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=95.96  E-value=0.035  Score=49.13  Aligned_cols=39  Identities=31%  Similarity=0.488  Sum_probs=33.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      -.|+++||+||++++|.+++..+... |++++++.+++++
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~   81 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKD-GANIVIAAKTAQP   81 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESCCSC
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHC-CCEEEEEECChhh
Confidence            35789999999999999988888777 9999999887663

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.96  E-value=0.036  Score=45.70  Aligned_cols=72  Identities=15%  Similarity=0.217  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhh---h-------ccCccEEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYED---I-------EEKFDVLY  217 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~---~-------~~~~d~v~  217 (327)
                      +++++|+||+|.+|.+.+..+... |.+++++.+++++.+.+ ++++.-..+..+-.+..+   .       ..++|+++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAK-GYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999999999999988888877 99999888887765544 344322222222222211   1       13789999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      +++|
T Consensus        84 ~~Ag   87 (234)
T 2ehd_A           84 NNAG   87 (234)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=95.94  E-value=0.05  Score=45.85  Aligned_cols=73  Identities=22%  Similarity=0.361  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCC-EEEeCCCCChh---hhc-------cCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGAD-KVIDYRKTKYE---DIE-------EKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~---~~~-------~~~d~  215 (327)
                      .++++||+||+|.+|.+++..+... |++++++.+++++.+.+ +++... ..+..+-.+..   ...       .++|+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKA-GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999988888877 99999988887765544 334321 12221112211   111       37999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        90 lv~~Ag   95 (263)
T 3ak4_A           90 LCANAG   95 (263)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=95.94  E-value=0.024  Score=48.10  Aligned_cols=73  Identities=21%  Similarity=0.358  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCEE-EeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADKV-IDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~v-~~~~~~~~~~---~-------~~~  212 (327)
                      .++++||+||+|++|.+.+..+... |++++++.+++++.+.+ +   +.+.... +..+-.+..+   .       ..+
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVA-GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999988888777 99999998887765444 2   2343222 1111112111   1       147


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        82 iD~lVnnAG   90 (264)
T 3tfo_A           82 IDVLVNNAG   90 (264)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=95.93  E-value=0.026  Score=47.32  Aligned_cols=99  Identities=19%  Similarity=0.143  Sum_probs=66.4

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhhc--cC
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDIE--EK  212 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~--~~  212 (327)
                      .+....+.++++||-.| ||. |..+..+++.++ +.+++.++.+++..+.+++    .|.+..+.....+..+..  ..
T Consensus        85 i~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~  162 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAG-VGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEEN  162 (255)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCS
T ss_pred             HHHhhCCCCCCEEEEec-CCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCC
Confidence            44567889999999998 776 888888888853 4677788888887777754    354321111112222222  35


Q ss_pred             ccEEEeCCCCc----hhhhhhhcCCCcEEEee
Q 020320          213 FDVLYDTIGDC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       213 ~d~v~d~~g~~----~~~~~~l~~~g~~v~~g  240 (327)
                      +|+++......    ..+.+.|+++|+++...
T Consensus       163 ~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          163 VDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             EEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             cCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            89999766533    56678899999988763

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=95.92  E-value=0.02  Score=48.01  Aligned_cols=73  Identities=22%  Similarity=0.369  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EEeCCCCChhh---h-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VIDYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~---~-------~~~~d~  215 (327)
                      .++++||+||++++|.++++.+... |++++++.+++++.+.+ ++++... .+..+-.+..+   .       ..++|+
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAER-GAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988888877 99999999887765544 3443221 12111122111   1       147999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        87 lv~nAg   92 (248)
T 3op4_A           87 LVNNAG   92 (248)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=95.92  E-value=0.041  Score=46.45  Aligned_cols=74  Identities=22%  Similarity=0.281  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCEE-EeCCCCChhh---h-------cc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      -.++++||+||++++|.+++..+... |++++++.+++++.+.+ +   +.+.... +..+-.+..+   .       ..
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQ-GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999988888777 99999999887765443 2   2343322 2212122211   1       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        88 ~id~lv~nAg   97 (264)
T 3ucx_A           88 RVDVVINNAF   97 (264)
T ss_dssp             CCSEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7999999886

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=95.92  E-value=0.037  Score=46.99  Aligned_cols=73  Identities=18%  Similarity=0.321  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCEE-EeCCCCChh---hh-------c-c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADKV-IDYRKTKYE---DI-------E-E  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~v-~~~~~~~~~---~~-------~-~  211 (327)
                      .+++++|+||+|++|.++++.+... |++++++.+++++.+.+ +   +.+.... +..+-.+..   ..       . .
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999998888877 99999988887765433 2   2343322 211111111   11       1 5


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        99 ~id~lv~nAg  108 (273)
T 1ae1_A           99 KLNILVNNAG  108 (273)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7999999987

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=95.92  E-value=0.025  Score=47.78  Aligned_cols=75  Identities=20%  Similarity=0.350  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEE-EeCCCCChhh---h-------cc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      -.++++||+||+|++|.+++..+... |++++++.+++++.+.+.    +.+.... +..+-.+...   .       ..
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSL-GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            45789999999999999988887777 999999988877654442    2343221 2111122111   1       14


Q ss_pred             CccEEEeCCCC
Q 020320          212 KFDVLYDTIGD  222 (327)
Q Consensus       212 ~~d~v~d~~g~  222 (327)
                      ++|++++++|.
T Consensus       106 ~id~lv~~Ag~  116 (262)
T 3rkr_A          106 RCDVLVNNAGV  116 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999999873

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=95.92  E-value=0.029  Score=47.97  Aligned_cols=73  Identities=19%  Similarity=0.309  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc---CC-C-EEEeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL---GA-D-KVIDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~---g~-~-~v~~~~~~~~~~---~-------~~  211 (327)
                      .|+++||+||+|++|.+++..+... |++++++.+++++.+.+ +++   +. . ..+..+-.+..+   .       ..
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAE-GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            6789999999999999988888777 99999999887765443 222   22 2 222222222211   1       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       111 ~iD~lvnnAG  120 (281)
T 4dry_A          111 RLDLLVNNAG  120 (281)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=95.91  E-value=0.033  Score=47.55  Aligned_cols=74  Identities=19%  Similarity=0.227  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCEE-EeCCCCChhh---h-------cc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      ..++++||+||++++|.+++..+... |++++++.+++++.+.+ ++   .+.... +..+-.+..+   .       ..
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAAR-GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999988887777 99999998887765443 22   343322 2111122111   1       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       101 ~id~lv~nAg  110 (279)
T 3sju_A          101 PIGILVNSAG  110 (279)
T ss_dssp             SCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7999999987

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=95.91  E-value=0.038  Score=46.62  Aligned_cols=73  Identities=18%  Similarity=0.243  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCEE-EeCCCCChhh----------hccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADKV-IDYRKTKYED----------IEEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~v-~~~~~~~~~~----------~~~~  212 (327)
                      .+++++|+||+|++|.+++..+... |++++++.+++++.+.+ ++   .+.... +..+-.+..+          ...+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999998888877 99999888887665443 22   243322 2111122211          1147


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        85 id~lv~nAg   93 (262)
T 1zem_A           85 IDFLFNNAG   93 (262)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999886

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=95.91  E-value=0.033  Score=46.86  Aligned_cols=73  Identities=23%  Similarity=0.372  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-EeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-IDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~---~-------~~~  212 (327)
                      .++++||+||++++|.++++.+... |++++++.+++++.+.+    ++.+.... +..+-.+...   .       ..+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKA-GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988887777 99999998887765443    23343322 2212222211   1       147


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        90 id~lv~nAg   98 (256)
T 3gaf_A           90 ITVLVNNAG   98 (256)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.90  E-value=0.038  Score=49.59  Aligned_cols=86  Identities=20%  Similarity=0.133  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..++..+.+.+.++|+...     .++.+.+...|+++.++...    
T Consensus       190 ~gktvGIIG-lG~IG~~vA~~l~a~-G~~V~~~d~~~~~~~~~~~~G~~~~-----~~l~ell~~aDvV~l~~Plt~~t~  262 (393)
T 2nac_A          190 EAMHVGTVA-AGRIGLAVLRRLAPF-DVHLHYTDRHRLPESVEKELNLTWH-----ATREDMYPVCDVVTLNCPLHPETE  262 (393)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-TCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHGGGCSEEEECSCCCTTTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhC-CCEEEEEcCCccchhhHhhcCceec-----CCHHHHHhcCCEEEEecCCchHHH
Confidence            588999999 999999999999998 9999888887766677777776421     23455667899999887521    


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          ...+..|+++..++.++
T Consensus       263 ~li~~~~l~~mk~gailIN~a  283 (393)
T 2nac_A          263 HMINDETLKLFKRGAYIVNTA  283 (393)
T ss_dssp             TCBSHHHHTTSCTTEEEEECS
T ss_pred             HHhhHHHHhhCCCCCEEEECC
Confidence                24556788888777775

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=95.88  E-value=0.03  Score=46.99  Aligned_cols=73  Identities=25%  Similarity=0.396  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh---h-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~---~-------~~~~d~  215 (327)
                      .++++||+||+|++|.+.+..+... |+++++..+++++.+.+ ++++.... +..+-.+..+   .       ..++|+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999988888877 99998888887765443 44553322 2111122111   1       136899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        84 lv~~Ag   89 (253)
T 1hxh_A           84 LVNNAG   89 (253)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=95.88  E-value=0.034  Score=47.36  Aligned_cols=42  Identities=19%  Similarity=0.345  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .++++||+||+|.+|.+++..+... |++++++.+++++.+.+
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   72 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEEL   72 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECChHHHHHH
Confidence            4689999999999999998888877 99999988887665433

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=95.87  E-value=0.045  Score=46.62  Aligned_cols=73  Identities=16%  Similarity=0.253  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCEE-EeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADKV-IDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~v-~~~~~~~~~~---~-------~~~  212 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+ ++   .+.... +..+-.+..+   .       ..+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999998888877 99999988887765433 22   343322 2111122111   1       137


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus       100 iD~lv~~Ag  108 (277)
T 2rhc_B          100 VDVLVNNAG  108 (277)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=95.87  E-value=0.029  Score=47.82  Aligned_cols=73  Identities=18%  Similarity=0.272  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh---h-------ccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~---~-------~~~~d~  215 (327)
                      .++++||+||+|.+|.++++.+... |.+++++.+++++.+.+ ++++.... +..+-.+...   .       ..++|+
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAA-GDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4689999999999999988888877 99999999887765544 44543322 2222122111   1       137999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        83 lv~~Ag   88 (281)
T 3m1a_A           83 LVNNAG   88 (281)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999988

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.86  E-value=0.04  Score=46.51  Aligned_cols=76  Identities=20%  Similarity=0.294  Sum_probs=50.6

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEEEeCCCCChhh---h------
Q 020320          145 GFKTGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKVIDYRKTKYED---I------  209 (327)
Q Consensus       145 ~~~~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~---~------  209 (327)
                      ....++++||+||+  +++|.+.+..+... |++++++.+++...+.++    +.+.-..+..+-.+..+   .      
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHc-CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            34678999999998  99999988887777 999999888765444443    34432223222222211   1      


Q ss_pred             -ccCccEEEeCCC
Q 020320          210 -EEKFDVLYDTIG  221 (327)
Q Consensus       210 -~~~~d~v~d~~g  221 (327)
                       ..++|++++++|
T Consensus        89 ~~g~id~lv~nAg  101 (271)
T 3ek2_A           89 HWDSLDGLVHSIG  101 (271)
T ss_dssp             HCSCEEEEEECCC
T ss_pred             HcCCCCEEEECCc
Confidence             147899999987

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=95.84  E-value=0.041  Score=46.85  Aligned_cols=72  Identities=18%  Similarity=0.373  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHHcCCCEEEeCCCCChhhhc-cCccEEEeCCCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKELGADKVIDYRKTKYEDIE-EKFDVLYDTIGDC  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~-~~~d~v~d~~g~~  223 (327)
                      .+++++|+| +|++|.+++..+... |.++++..+++++. +++++++....++..+  +.... +++|+++++++..
T Consensus       118 ~~k~vlViG-aGg~g~a~a~~L~~~-G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~--~~~~~~~~~DivVn~t~~~  191 (271)
T 1nyt_A          118 PGLRILLIG-AGGASRGVLLPLLSL-DCAVTITNRTVSRAEELAKLFAHTGSIQALS--MDELEGHEFDLIINATSSG  191 (271)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHHTGGGSSEEECC--SGGGTTCCCSEEEECCSCG
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHhhccCCeeEec--HHHhccCCCCEEEECCCCC
Confidence            578999999 589999999998888 78887777887765 4445555310011111  11111 5799999999854

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=95.84  E-value=0.042  Score=47.07  Aligned_cols=37  Identities=30%  Similarity=0.531  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .++++||+||++++|.+++..+... |++++++.++++
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~   44 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAAD-GANVALVAKSAE   44 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTT-TCEEEEEESCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECChh
Confidence            4789999999999999988888877 999999988765

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=95.84  E-value=0.016  Score=48.99  Aligned_cols=92  Identities=10%  Similarity=0.081  Sum_probs=65.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCE-EEeCCCCChhhhccCccEEEeCCC--Cc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK-VIDYRKTKYEDIEEKFDVLYDTIG--DC  223 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~d~v~d~~g--~~  223 (327)
                      .++.+||.+| +|. |..+..+++...+.+++.++.+++..+.+++.+... ++..+..........+|+|+....  ..
T Consensus        84 ~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~l  161 (269)
T 1p91_A           84 DKATAVLDIG-CGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKA  161 (269)
T ss_dssp             TTCCEEEEET-CTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCCCH
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCChhhH
Confidence            6789999999 888 999999998754678888889999988887765432 222222222111246899995433  34


Q ss_pred             hhhhhhhcCCCcEEEee
Q 020320          224 KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ~~~~~~l~~~g~~v~~g  240 (327)
                      ....+.|+|+|.++...
T Consensus       162 ~~~~~~L~pgG~l~~~~  178 (269)
T 1p91_A          162 EELARVVKPGGWVITAT  178 (269)
T ss_dssp             HHHHHHEEEEEEEEEEE
T ss_pred             HHHHHhcCCCcEEEEEE
Confidence            77789999999998774

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=95.83  E-value=0.044  Score=45.95  Aligned_cols=43  Identities=19%  Similarity=0.370  Sum_probs=36.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      -.++++||+||++++|.+++..+... |++++++.+++++.+.+
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   52 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARY-GATVILLGRNEEKLRQV   52 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            35789999999999999988887777 99999999887765443

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=95.82  E-value=0.043  Score=46.03  Aligned_cols=72  Identities=22%  Similarity=0.346  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH---cCCCEE-EeCCCCChh---hhc-------cCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE---LGADKV-IDYRKTKYE---DIE-------EKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~---~g~~~v-~~~~~~~~~---~~~-------~~~  213 (327)
                      .++++||+||+|++|.+++..+... |++++++.++++ .+..++   .+.... +..+-.+..   ...       .++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARA-GANIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV   80 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999988888877 999888887665 333333   343322 211112211   111       379


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus        81 d~lv~~Ag   88 (255)
T 2q2v_A           81 DILVNNAG   88 (255)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=95.82  E-value=0.0089  Score=48.14  Aligned_cols=71  Identities=17%  Similarity=0.156  Sum_probs=48.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCC---ChhhhccCccEEEeCCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKT---KYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~d~v~d~~g~  222 (327)
                      .+++|+||+|.+|..++..+... |.+++++++++++.......+.. ++..+-.   .+....+++|+++.++|.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEGPRPAH-VVVGDVLQAADVDKTVAGQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSSCCCSE-EEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeChhhcccccCCceE-EEEecCCCHHHHHHHHcCCCEEEECccC
Confidence            68999999999999999888887 89999998877654221111222 2222222   233345789999999873

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.81  E-value=0.026  Score=47.78  Aligned_cols=37  Identities=24%  Similarity=0.505  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .|+++||+||++++|.++++.+... |+++++..++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~   46 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLEL-GAQVLTTARARP   46 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHc-CCEEEEEECCch
Confidence            6899999999999999988888877 999999887654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=95.81  E-value=0.035  Score=47.40  Aligned_cols=73  Identities=22%  Similarity=0.359  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-HHH----HHHcCCCEE-EeCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEF----VKELGADKV-IDYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-~~~----~~~~g~~~v-~~~~~~~~~~----------~~~  211 (327)
                      .++++||+||+|++|.+++..+... |+++++..+++++ .+.    +++.+.... +..+-.+..+          ...
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999998888887 9999988876543 222    234454332 2212122111          114


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       107 ~iD~lv~~Ag  116 (283)
T 1g0o_A          107 KLDIVCSNSG  116 (283)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=95.80  E-value=0.047  Score=46.11  Aligned_cols=73  Identities=12%  Similarity=0.176  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH----cCCC-E-EEeCCCCChhh----------hc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE----LGAD-K-VIDYRKTKYED----------IE  210 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~----~g~~-~-v~~~~~~~~~~----------~~  210 (327)
                      .++++||+||++++|.++++.+... |++++++.+++++.+.+ ++    .+.. . .+..+-.+..+          ..
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEA-GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999988888777 99999998887765443 22    3332 2 12112122111          11


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus        86 g~id~lvnnAg   96 (265)
T 3lf2_A           86 GCASILVNNAG   96 (265)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=95.78  E-value=0.039  Score=46.45  Aligned_cols=73  Identities=18%  Similarity=0.308  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCE-EEeCCCCChh---hh-------c-c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADK-VIDYRKTKYE---DI-------E-E  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~-v~~~~~~~~~---~~-------~-~  211 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+ ++   .+... .+..+-.+..   ..       . .
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999988888777 99999988887765433 22   24322 1211112211   11       1 4


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=95.75  E-value=0.028  Score=48.05  Aligned_cols=73  Identities=18%  Similarity=0.281  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc---CCCEEE-eCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL---GADKVI-DYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~---g~~~v~-~~~~~~~~~---~-------~~~  212 (327)
                      .++++||+||++++|.+++..+... |++++++.+++++.+.+ +++   +..... ..+-.+...   .       ..+
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFARE-GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988888777 99988888887765444 333   332221 111111111   1       147


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        86 iD~lvnnAg   94 (280)
T 3tox_A           86 LDTAFNNAG   94 (280)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.75  E-value=0.071  Score=44.87  Aligned_cols=73  Identities=18%  Similarity=0.233  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEEeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVIDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||+  |++|.++++.+... |++++++.++++..+.+    ++.+....+..+-.+..+   .       ..
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999998  99999988888777 99999888876522222    223432233222222211   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        86 ~iD~lv~~Ag   95 (261)
T 2wyu_A           86 GLDYLVHAIA   95 (261)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.74  E-value=0.071  Score=45.71  Aligned_cols=95  Identities=20%  Similarity=0.224  Sum_probs=63.6

Q ss_pred             cchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320          130 LPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED  208 (327)
Q Consensus       130 ~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (327)
                      .|++...+...++... .-.|++++|+|+++.+|..++.++... |+++.+..+....++                 ..+
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~~~~T~~l~-----------------l~~  206 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-NATVTIVHSGTSTED-----------------MID  206 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTSCHHH-----------------HHH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCCCCch-----------------hhh
Confidence            4555444555555443 358999999997777999999999988 887665544222111                 013


Q ss_pred             hccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCC
Q 020320          209 IEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       209 ~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~  242 (327)
                      ..+.+|+++.++|..+ -.-..++++..++.++..
T Consensus       207 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          207 YLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHHTCSEEEECSCCTTCBCGGGSCTTCEEEECCCE
T ss_pred             hhccCCEEEECCCCCCCCcHHhcCCCcEEEEEecc
Confidence            4567899999998652 223457888888888764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=95.74  E-value=0.039  Score=46.48  Aligned_cols=73  Identities=22%  Similarity=0.321  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-HHHH-HHc----CCCEE-EeCCCCChhh---h-------c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFV-KEL----GADKV-IDYRKTKYED---I-------E  210 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-~~~~-~~~----g~~~v-~~~~~~~~~~---~-------~  210 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++ .+.+ +++    +.... +..+-.+..+   .       .
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHc-CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999988888877 9999888887665 4332 222    43322 2111122111   1       1


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus        82 g~iD~lv~~Ag   92 (260)
T 1x1t_A           82 GRIDILVNNAG   92 (260)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999987

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=95.74  E-value=0.013  Score=49.79  Aligned_cols=72  Identities=11%  Similarity=0.161  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---h-------ccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED---I-------EEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~-------~~~~d~v~  217 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+..... ..+..+-.+..+   .       ..++|+++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEE-GHPLLLLARRVERLKALNLPNT-LCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHTTCCTTE-EEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHhhcCCc-eEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4689999999999999988887777 9999999888665543211111 112111122111   1       14799999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      +++|
T Consensus        93 nnAg   96 (266)
T 3p19_A           93 NNAG   96 (266)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9988

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=95.72  E-value=0.046  Score=45.97  Aligned_cols=41  Identities=20%  Similarity=0.287  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~   46 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARN-GARLLLFSRNREKLEA   46 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            4689999999999999988888877 9999998888765543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=95.72  E-value=0.045  Score=46.60  Aligned_cols=73  Identities=18%  Similarity=0.281  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCEE-E--eCCCCC-hhhhc------cCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADKV-I--DYRKTK-YEDIE------EKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~v-~--~~~~~~-~~~~~------~~~  213 (327)
                      .+++++|+||++++|.+++..+... |+++++..+++++.+.+ +   +.+.... +  |-.+.. .....      .++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i  110 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGA-GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV  110 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            5789999999999999988888877 99999998877654333 2   2343322 2  222221 11111      479


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus       111 D~lvnnAg  118 (275)
T 4imr_A          111 DILVINAS  118 (275)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=95.72  E-value=0.041  Score=45.81  Aligned_cols=73  Identities=23%  Similarity=0.305  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-EeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-IDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~---~-------~~~  212 (327)
                      .+++++|+||+|++|.+.+..+... |++++++.+++++.+.+    ++.+.... +..+-.+..+   .       ..+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASK-GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999988888877 99999999887765444    23343322 2212222211   1       136


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        83 id~li~~Ag   91 (247)
T 3lyl_A           83 IDILVNNAG   91 (247)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=95.72  E-value=0.049  Score=44.05  Aligned_cols=98  Identities=11%  Similarity=-0.011  Sum_probs=66.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEE--EeCCCCChhhhccCc
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKV--IDYRKTKYEDIEEKF  213 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~~~~~~  213 (327)
                      .+....++++++||-+| || .|..+..+++.  +.+++.++.+++..+.+++    .+.+.+  +..+..........+
T Consensus        69 ~~~~l~~~~~~~vLdiG-~G-~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~  144 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIG-TG-SGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPF  144 (210)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred             HHHhcCCCCCCEEEEEc-CC-CCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCc
Confidence            34567788999999999 77 48888888886  7889999999888777754    343322  221111111123469


Q ss_pred             cEEEeCCC--C-chhhhhhhcCCCcEEEeeC
Q 020320          214 DVLYDTIG--D-CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       214 d~v~d~~g--~-~~~~~~~l~~~g~~v~~g~  241 (327)
                      |+++....  . .....+.|+++|+++..-.
T Consensus       145 D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          145 DAIIVTAAPPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             EEEEESSBCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             cEEEEccchhhhhHHHHHhcccCcEEEEEEc
Confidence            99997644  2 2567889999999887643

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.71  E-value=0.037  Score=48.18  Aligned_cols=137  Identities=23%  Similarity=0.217  Sum_probs=88.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---  223 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  223 (327)
                      -.|.++.|+| .|.+|...++.++.+ |.++++..+++++. .+.++|+..      .+..+.....|+++.++...   
T Consensus       140 l~g~~vgIIG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~-~~~~~g~~~------~~l~ell~~aDvVvl~~P~~~~t  210 (313)
T 2ekl_A          140 LAGKTIGIVG-FGRIGTKVGIIANAM-GMKVLAYDILDIRE-KAEKINAKA------VSLEELLKNSDVISLHVTVSKDA  210 (313)
T ss_dssp             CTTCEEEEES-CSHHHHHHHHHHHHT-TCEEEEECSSCCHH-HHHHTTCEE------CCHHHHHHHCSEEEECCCCCTTS
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEECCCcchh-HHHhcCcee------cCHHHHHhhCCEEEEeccCChHH
Confidence            3688999999 999999999999988 99998888777654 466777642      13455567899999887621   


Q ss_pred             -----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCcee---eeCCCcccchhhHHHHHHHHH
Q 020320          224 -----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKA---QIDPTGPYKFKDVIEAFRYLE  295 (327)
Q Consensus       224 -----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~~~~~i~~a~~~~~  295 (327)
                           ...+..+++++.++.++....          .+   -+.+.+.+++|.+.-   ..+..+  |+.  +.+...+.
T Consensus       211 ~~li~~~~l~~mk~ga~lIn~arg~~----------vd---~~aL~~aL~~g~i~ga~lDv~~~e--P~~--~~~~~~L~  273 (313)
T 2ekl_A          211 KPIIDYPQFELMKDNVIIVNTSRAVA----------VN---GKALLDYIKKGKVYAYATDVFWNE--PPK--EEWELELL  273 (313)
T ss_dssp             CCSBCHHHHHHSCTTEEEEESSCGGG----------BC---HHHHHHHHHTTCEEEEEESCCSSS--SCC--SHHHHHHH
T ss_pred             HHhhCHHHHhcCCCCCEEEECCCCcc----------cC---HHHHHHHHHcCCCcEEEEecCCCC--CCC--CcccchHh
Confidence                 345677888888877754211          11   245667788888741   122222  322  22222333


Q ss_pred             hCCCCceEEEEeCCCCC
Q 020320          296 TGRARGKVVISAFPYTE  312 (327)
Q Consensus       296 ~~~~~gk~vv~~~~~~~  312 (327)
                      +.   .++++.++....
T Consensus       274 ~~---~nviltPH~~~~  287 (313)
T 2ekl_A          274 KH---ERVIVTTHIGAQ  287 (313)
T ss_dssp             HS---TTEEECCSCTTC
T ss_pred             hC---CCEEECCccCcC
Confidence            22   367888876553

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.71  E-value=0.039  Score=45.80  Aligned_cols=73  Identities=19%  Similarity=0.119  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      .+.+|+|+||+|.+|...+..+...+ |.++++..+++++.+.+ .-+...+. |..+ +.+.....++|++|.++|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~   78 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTS   78 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEecc
Confidence            46789999999999999888887764 57888888876654332 11233222 2221 123334568999999887

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=95.71  E-value=0.033  Score=48.00  Aligned_cols=75  Identities=17%  Similarity=0.224  Sum_probs=49.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc---CCCE--EE--eCCCC-Chhh--------h
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL---GADK--VI--DYRKT-KYED--------I  209 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~---g~~~--v~--~~~~~-~~~~--------~  209 (327)
                      ..++++||+||+|++|.+++..+... |++++++.+++++.+.+ +++   +...  .+  |-.+. ....        .
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSN-GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            35789999999999999988888777 99999999987765433 232   2211  12  22222 1111        1


Q ss_pred             ccCccEEEeCCCC
Q 020320          210 EEKFDVLYDTIGD  222 (327)
Q Consensus       210 ~~~~d~v~d~~g~  222 (327)
                      ..++|++++++|.
T Consensus        89 ~g~iD~lv~nAg~  101 (311)
T 3o26_A           89 FGKLDILVNNAGV  101 (311)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            1479999999983

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=95.70  E-value=0.054  Score=46.15  Aligned_cols=35  Identities=29%  Similarity=0.427  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .++++||+||++++|.++++.+... |++++++.++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~   43 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEA-GADIAICDRC   43 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCC
Confidence            5789999999999999988888877 9999988876

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.70  E-value=0.054  Score=46.01  Aligned_cols=37  Identities=32%  Similarity=0.530  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .++++||+||++++|.+++..+... |++++++.++++
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~   41 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARD-GANVAIAAKSAV   41 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeccch
Confidence            5789999999999999988877777 999999888765

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=95.69  E-value=0.036  Score=45.92  Aligned_cols=99  Identities=19%  Similarity=0.137  Sum_probs=66.9

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhh---hcc
Q 020320          139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYED---IEE  211 (327)
Q Consensus       139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~---~~~  211 (327)
                      ..++...+.++++||-+| || .|..+..+++.. +.+++.++.+++..+.+++    .|.+.+- ....+...   ...
T Consensus        82 ~~~~~l~~~~~~~vLdiG-~G-~G~~~~~la~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~~d~~~~~~~~~  157 (235)
T 1jg1_A           82 IMLEIANLKPGMNILEVG-TG-SGWNAALISEIV-KTDVYTIERIPELVEFAKRNLERAGVKNVH-VILGDGSKGFPPKA  157 (235)
T ss_dssp             HHHHHHTCCTTCCEEEEC-CT-TSHHHHHHHHHH-CSCEEEEESCHHHHHHHHHHHHHTTCCSEE-EEESCGGGCCGGGC
T ss_pred             HHHHhcCCCCCCEEEEEe-CC-cCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcE-EEECCcccCCCCCC
Confidence            344556788999999999 77 788899999987 5788888888887777654    4543321 11111111   112


Q ss_pred             CccEEEeCCC---CchhhhhhhcCCCcEEEeeC
Q 020320          212 KFDVLYDTIG---DCKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       212 ~~d~v~d~~g---~~~~~~~~l~~~g~~v~~g~  241 (327)
                      .+|+++....   -.....+.|+++|+++..-.
T Consensus       158 ~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~  190 (235)
T 1jg1_A          158 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVG  190 (235)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CccEEEECCcHHHHHHHHHHhcCCCcEEEEEEe
Confidence            4899996654   23677889999999877543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.69  E-value=0.019  Score=49.45  Aligned_cols=73  Identities=19%  Similarity=0.310  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-------ccHHHHH---HcCCCEEE-eCCC-CChhhhccCccEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-------PKVEFVK---ELGADKVI-DYRK-TKYEDIEEKFDVL  216 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-------~~~~~~~---~~g~~~v~-~~~~-~~~~~~~~~~d~v  216 (327)
                      +.+|+|+||+|.+|..++..+... |.++++.++++       ++.+.++   ..+...+. |..+ +.+.....++|.|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v   80 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKA-GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIV   80 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHH-TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhC-CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence            457999999999999998888877 88899888875       4433332   34544332 2222 2233445789999


Q ss_pred             EeCCCC
Q 020320          217 YDTIGD  222 (327)
Q Consensus       217 ~d~~g~  222 (327)
                      |.+++.
T Consensus        81 i~~a~~   86 (307)
T 2gas_A           81 ICAAGR   86 (307)
T ss_dssp             EECSSS
T ss_pred             EECCcc
Confidence            999873

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=95.68  E-value=0.042  Score=46.83  Aligned_cols=73  Identities=21%  Similarity=0.363  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCC--CEE-EeCCCCChhh---h-------ccCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGA--DKV-IDYRKTKYED---I-------EEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~--~~v-~~~~~~~~~~---~-------~~~~  213 (327)
                      .+++++|+||+|++|.+++..+... |++++++.+++++.+.+ +++..  ... +..+-.+..+   .       ..++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEA-GARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999988888877 99999888887665433 33321  211 1111112111   1       1379


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus       107 D~lvnnAg  114 (276)
T 2b4q_A          107 DILVNNAG  114 (276)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=95.67  E-value=0.049  Score=46.36  Aligned_cols=74  Identities=20%  Similarity=0.363  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH----cCCCEE-EeCCCCChhh---h-------c
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE----LGADKV-IDYRKTKYED---I-------E  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~----~g~~~v-~~~~~~~~~~---~-------~  210 (327)
                      -.++++||+||++++|.++++.+... |++++++.++.++.+.+ ++    .+.... +..+-.+..+   .       .
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRH-GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999988888877 99999998887654333 22    343322 2111122111   1       1


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus       104 g~id~lv~nAg  114 (277)
T 4fc7_A          104 GRIDILINCAA  114 (277)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999987

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=95.66  E-value=0.052  Score=45.75  Aligned_cols=73  Identities=22%  Similarity=0.302  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCC-EEEeCCCCChh---hhc-------cCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGAD-KVIDYRKTKYE---DIE-------EKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~---~~~-------~~~d~  215 (327)
                      .+++++|+||+|++|.++++.+... |.++++..+++++.+.+ +++... ..+..+-.+..   ...       .++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999988888777 99999988887765443 344321 11211112211   111       37999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        85 lv~~Ag   90 (260)
T 1nff_A           85 LVNNAG   90 (260)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.66  E-value=0.033  Score=47.36  Aligned_cols=73  Identities=21%  Similarity=0.351  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCEEE-eCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADKVI-DYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~v~-~~~~~~~~~---~-------~~~  212 (327)
                      .|+++||+||++++|.+++..+... |+++++..+++++.+.+ +   +.+..... ..+-.+...   .       ..+
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVA-GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            5789999999999999988888777 99988888887765433 2   33443322 111112111   1       137


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus       104 iD~lv~nAg  112 (271)
T 4ibo_A          104 VDILVNNAG  112 (271)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.66  E-value=0.21  Score=44.43  Aligned_cols=104  Identities=12%  Similarity=0.145  Sum_probs=67.1

Q ss_pred             HHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCC----ccc---------HHHHHHcCCCE
Q 020320          133 AVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTS----TPK---------VEFVKELGADK  197 (327)
Q Consensus       133 ~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~----~~~---------~~~~~~~g~~~  197 (327)
                      .+...+.+++..+ --.+.+|+|.| +|..|..++.++..+ |. ++++++++    .+|         ..++++...  
T Consensus       175 ~lAal~~A~~i~g~~l~~~kVVv~G-AGaAG~~iAkll~~~-G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~--  250 (388)
T 1vl6_A          175 VSAAFLNALKLTEKKIEEVKVVVNG-IGAAGYNIVKFLLDL-GVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP--  250 (388)
T ss_dssp             HHHHHHHHHHHHTCCTTTCEEEEEC-CSHHHHHHHHHHHHH-TCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT--
T ss_pred             HHHHHHHHHHHhCCCCCCcEEEEEC-CCHHHHHHHHHHHhC-CCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc--
Confidence            3333455565433 34668999999 899999999999999 87 56677666    444         334443321  


Q ss_pred             EEeCCCCChhhhccCccEEEeCCCC-c--hhhhhhhcCCCcEEEeeCC
Q 020320          198 VIDYRKTKYEDIEEKFDVLYDTIGD-C--KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       198 v~~~~~~~~~~~~~~~d~v~d~~g~-~--~~~~~~l~~~g~~v~~g~~  242 (327)
                        .....++.+.+.++|+++-+++. .  ...++.|+++-.++.+..+
T Consensus       251 --~~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNP  296 (388)
T 1vl6_A          251 --ERLSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANP  296 (388)
T ss_dssp             --TCCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSS
T ss_pred             --cCchhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCC
Confidence              11234566777889999987762 2  5566777776655555443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=95.66  E-value=0.05  Score=45.63  Aligned_cols=72  Identities=17%  Similarity=0.287  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCE-EEeCCCCChh---hh-------ccCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADK-VIDYRKTKYE---DI-------EEKF  213 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~-v~~~~~~~~~---~~-------~~~~  213 (327)
                      +++++|+||+|++|.+++..+... |++++++.+++++.+.+ ++   .+... .+..+-.+..   ..       ..++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999988888877 99999988887655433 22   34332 2221212221   11       1379


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus        81 d~lv~nAg   88 (256)
T 1geg_A           81 DVIVNNAG   88 (256)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=95.66  E-value=0.072  Score=44.70  Aligned_cols=42  Identities=14%  Similarity=0.184  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+++++|+||+|.+|.+.+..+... |.+++++.+++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGE-GATVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHH
Confidence            4689999999999999988888777 89999988887765443

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=95.65  E-value=0.037  Score=46.30  Aligned_cols=118  Identities=13%  Similarity=0.097  Sum_probs=76.4

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHHc-----CCCEEEeCCCCChhhh-c-
Q 020320          139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKEL-----GADKVIDYRKTKYEDI-E-  210 (327)
Q Consensus       139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~~-----g~~~v~~~~~~~~~~~-~-  210 (327)
                      ..+....+.++++||-.| +|. |..+..+++..+ +.+++.++.+++..+.+++.     |.+.+- ....+..+. . 
T Consensus        87 ~~~~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~-~~~~d~~~~~~~  163 (258)
T 2pwy_A           87 AMVTLLDLAPGMRVLEAG-TGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVR-FHLGKLEEAELE  163 (258)
T ss_dssp             HHHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEE-EEESCGGGCCCC
T ss_pred             HHHHHcCCCCCCEEEEEC-CCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEE-EEECchhhcCCC
Confidence            344567889999999999 775 888889998863 46788888888887777553     533221 111122221 1 


Q ss_pred             -cCccEEEeCCCCc----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          211 -EKFDVLYDTIGDC----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       211 -~~~d~v~d~~g~~----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                       ..+|+++......    ..+.+.|+++|+++....              ..+.+.+.++.+++.-+.
T Consensus       164 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~--------------~~~~~~~~~~~l~~~gf~  217 (258)
T 2pwy_A          164 EAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP--------------NITQVLELVRAAEAHPFR  217 (258)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES--------------CHHHHHHHHHHHTTTTEE
T ss_pred             CCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC--------------CHHHHHHHHHHHHHCCCc
Confidence             3589999655433    556788999999887642              123455666666654443

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.64  E-value=0.05  Score=46.20  Aligned_cols=73  Identities=18%  Similarity=0.227  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCE-EEeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADK-VIDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~---~-------~~~  212 (327)
                      .++++||+||++++|.+++..+... |++++++.+++++.+.+    ++.+... .+..+-.+..+   .       ..+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARR-GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988887777 99999999887765433    2334321 22111122111   1       147


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus       106 iD~lvnnAg  114 (270)
T 3ftp_A          106 LNVLVNNAG  114 (270)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=95.64  E-value=0.058  Score=46.49  Aligned_cols=36  Identities=25%  Similarity=0.310  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      -.++++||+||++++|.+++..+... |++++++.++
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~   61 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLARE-GADIIAIDVC   61 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecc
Confidence            35789999999999999988888777 9999988865

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.64  E-value=0.0028  Score=52.80  Aligned_cols=92  Identities=11%  Similarity=0.170  Sum_probs=58.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCCCc--
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      .++|||+||+|.+|.++++.+... | .+++++.+++++...+...+...+. |-.+ +.+.....++|++|.+.|..  
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~  101 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADK-QTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDL  101 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence            368999999999999999988887 7 7888888887654322111222221 2221 22333457899999888742  


Q ss_pred             ----hhhhhhhcC--CCcEEEeeC
Q 020320          224 ----KNSFVVAKD--NAPIVDITW  241 (327)
Q Consensus       224 ----~~~~~~l~~--~g~~v~~g~  241 (327)
                          +..+..++.  .++++.++.
T Consensus       102 ~~~~~~~~~~~~~~~~~~iV~iSS  125 (236)
T 3qvo_A          102 DIQANSVIAAMKACDVKRLIFVLS  125 (236)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             hHHHHHHHHHHHHcCCCEEEEEec
Confidence                233444432  357887764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=95.64  E-value=0.022  Score=49.21  Aligned_cols=91  Identities=19%  Similarity=0.226  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccH-HHHHHcCCC--EEEeCCCCChhhhccCccEEEeCCCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKV-EFVKELGAD--KVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~-~~~~~~g~~--~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      -.+++++|+| +|++|.+++..+... |+ ++++..+++++. +++++++..  .+++.  .+..+...++|+++++++.
T Consensus       139 l~~~~vlVlG-aGg~g~aia~~L~~~-G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~~aDivIn~t~~  214 (297)
T 2egg_A          139 LDGKRILVIG-AGGGARGIYFSLLST-AAERIDMANRTVEKAERLVREGDERRSAYFSL--AEAETRLAEYDIIINTTSV  214 (297)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-TCSEEEEECSSHHHHHHHHHHSCSSSCCEECH--HHHHHTGGGCSEEEECSCT
T ss_pred             CCCCEEEEEC-cHHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhhhccCceeeH--HHHHhhhccCCEEEECCCC
Confidence            3678999999 699999998888888 87 677777887764 455666652  22211  1223345689999999873


Q ss_pred             ch--------hhhhhhcCCCcEEEeeC
Q 020320          223 CK--------NSFVVAKDNAPIVDITW  241 (327)
Q Consensus       223 ~~--------~~~~~l~~~g~~v~~g~  241 (327)
                      ..        .....++++..++.+..
T Consensus       215 ~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          215 GMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             TCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            31        11234555555555543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.64  E-value=0.044  Score=46.63  Aligned_cols=68  Identities=12%  Similarity=0.169  Sum_probs=52.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      .+|||+|+ |-+|...+..+... |.+++++++++.+...+...+.+.+. .+-.++.  ..++|+||.+++.
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~-~D~~d~~--~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQ-GWRIIGTSRNPDQMEAIRASGAEPLL-WPGEEPS--LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGG-TCEEEEEESCGGGHHHHHHTTEEEEE-SSSSCCC--CTTCCEEEECCCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHC-CCEEEEEEcChhhhhhHhhCCCeEEE-ecccccc--cCCCCEEEECCCc
Confidence            58999996 99999999998888 99999999998888777666654433 1222222  6789999999873

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=95.63  E-value=0.058  Score=45.75  Aligned_cols=74  Identities=22%  Similarity=0.276  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCE-EEeCCCCChh---hh-------cc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADK-VIDYRKTKYE---DI-------EE  211 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~---~~-------~~  211 (327)
                      -.+++++|+||+|.+|.+.+..+... |.+++++.+++++.+.+    ++.+... .+..+-.+..   ..       ..
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG  107 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            35789999999999999998888877 99999988887655433    2234332 2221212211   11       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       108 ~iD~li~~Ag  117 (272)
T 1yb1_A          108 DVSILVNNAG  117 (272)
T ss_dssp             CCSEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7999999987

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.62  E-value=0.056  Score=45.60  Aligned_cols=73  Identities=23%  Similarity=0.294  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEEEeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKVIDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||+  |++|.++++.+... |++++++.+++...+.++    +.+....+..+-.+...   .       ..
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999998  99999988888877 999998888763222222    23432333222222211   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        87 ~iD~lv~~Ag   96 (265)
T 1qsg_A           87 KFDGFVHSIG   96 (265)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=95.62  E-value=0.0078  Score=51.54  Aligned_cols=72  Identities=15%  Similarity=0.051  Sum_probs=49.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g~  222 (327)
                      +|||+||+|.+|..++..+....|.++++.++++++...+...+...+. |..+ +.+.....++|.+|.+++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   75 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI   75 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            5899999999999988887765478999999887765433333443322 2222 2233455799999999874

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.61  E-value=0.045  Score=46.99  Aligned_cols=72  Identities=19%  Similarity=0.144  Sum_probs=50.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHH--HHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVE--FVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~--~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      .++|+|+||+|.+|..++..+... | .+++++++++++..  .+...+...+. |..+ +.+.....++|.+|.+.+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   81 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLED-GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN   81 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH-CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhc-CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence            478999999999999998888777 7 88888888776542  23344554332 2222 223334578999999887

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.60  E-value=0.066  Score=45.45  Aligned_cols=73  Identities=19%  Similarity=0.220  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcccH---HHH-HHcCCCEEEeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTPKV---EFV-KELGADKVIDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~~~---~~~-~~~g~~~v~~~~~~~~~~---~-------~~  211 (327)
                      .+++++|+||+  |++|.+++..+... |++++++.++++..   +.+ ++.+....+..+-.+...   .       ..
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999998  99999998888877 99999888876522   222 223422222222222211   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        84 ~id~lv~nAg   93 (275)
T 2pd4_A           84 SLDFIVHSVA   93 (275)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7899999987

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.60  E-value=0.046  Score=45.99  Aligned_cols=73  Identities=16%  Similarity=0.224  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCEE-EeCCCCChh---hh-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADKV-IDYRKTKYE---DI-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~v-~~~~~~~~~---~~-------~~~  212 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+ +   +.+.... +..+-.+..   ..       ..+
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQD-GAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988888877 99999988887655432 2   2343322 211112211   11       137


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        92 iD~lv~~Ag  100 (260)
T 2zat_A           92 VDILVSNAA  100 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.59  E-value=0.027  Score=47.48  Aligned_cols=74  Identities=16%  Similarity=0.379  Sum_probs=48.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcC---CcEEEEeCCcccHHHHHHc---CCCE-EE--eCCC-CChhhhc------
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYG---ASHVVATTSTPKVEFVKEL---GADK-VI--DYRK-TKYEDIE------  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g---~~~v~~~~~~~~~~~~~~~---g~~~-v~--~~~~-~~~~~~~------  210 (327)
                      ..++++||+||+|.+|.+.+..+... |   .+++++.+++++.+.++++   +... .+  |-.+ +......      
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~-G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNL-PQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTS-SSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhc-CCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            45689999999999999988888877 7   8888888877654444332   3222 12  2222 1122211      


Q ss_pred             -c--CccEEEeCCC
Q 020320          211 -E--KFDVLYDTIG  221 (327)
Q Consensus       211 -~--~~d~v~d~~g  221 (327)
                       .  ++|+++.++|
T Consensus        98 ~g~~~id~li~~Ag  111 (267)
T 1sny_A           98 TKDQGLNVLFNNAG  111 (267)
T ss_dssp             HGGGCCSEEEECCC
T ss_pred             cCCCCccEEEECCC
Confidence             2  6999999987

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.59  E-value=0.033  Score=46.23  Aligned_cols=73  Identities=14%  Similarity=0.202  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcC--CcEEEEeCCcccHHHHHHc-CCCE-EEeCCCCChh---hhc-------c--
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYG--ASHVVATTSTPKVEFVKEL-GADK-VIDYRKTKYE---DIE-------E--  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g--~~~v~~~~~~~~~~~~~~~-g~~~-v~~~~~~~~~---~~~-------~--  211 (327)
                      .+++++|+||+|.+|.+++..+... |  .+++++.+++++.+.+.++ +... .+..+-.+..   ...       .  
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~-g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKD-KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTC-TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhc-CCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            3578999999999999988888877 7  8899888887776666554 2221 2211112211   111       2  


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++|.++|
T Consensus        81 ~id~li~~Ag   90 (250)
T 1yo6_A           81 GLSLLINNAG   90 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCc
Confidence            7999999886

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=95.59  E-value=0.057  Score=46.44  Aligned_cols=73  Identities=19%  Similarity=0.346  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc----CCCEE-EeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL----GADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~----g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      .+++++|+||+|.+|.+.+..+... |.+++++.+++++.+.+ +++    +.... +..+-.+...   .       ..
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            5689999999999999988888877 99999988887665433 222    43322 2111122111   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       104 ~id~li~~Ag  113 (302)
T 1w6u_A          104 HPNIVINNAA  113 (302)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=95.58  E-value=0.06  Score=45.74  Aligned_cols=36  Identities=28%  Similarity=0.312  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      -.++++||+||++++|.+++..+... |++++++.++
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~   46 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAAD-GADIIAVDLC   46 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecc
Confidence            35789999999999999988888777 9999988865

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=95.57  E-value=0.045  Score=45.48  Aligned_cols=73  Identities=19%  Similarity=0.371  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-H----cCCCEE-EeCCCCChh---hhc-------c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-E----LGADKV-IDYRKTKYE---DIE-------E  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~----~g~~~v-~~~~~~~~~---~~~-------~  211 (327)
                      .+++++|+||+|.+|.++++.+... |.+++++.+++++.+.+. +    .+.... +..+-.+..   ...       .
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASA-GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999988888777 999999888876554332 2    343322 221112211   111       3


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|+++.++|
T Consensus        85 ~~d~vi~~Ag   94 (248)
T 2pnf_A           85 GIDILVNNAG   94 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=95.57  E-value=0.012  Score=49.22  Aligned_cols=69  Identities=13%  Similarity=0.095  Sum_probs=47.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-e--CCcccHHHH-HHc-CCCEEEeCCCCChhhh-------ccCccEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-T--TSTPKVEFV-KEL-GADKVIDYRKTKYEDI-------EEKFDVL  216 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~--~~~~~~~~~-~~~-g~~~v~~~~~~~~~~~-------~~~~d~v  216 (327)
                      ++++||+||+|++|.++++.+... |++++++ .  +++++.+.+ +++ +.+ +.  +.......       ..++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~--~~~~v~~~~~~~~~~~g~iD~l   76 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQD-GYTVVCHDASFADAAERQRFESENPGTI-AL--AEQKPERLVDATLQHGEAIDTI   76 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHHHHSTTEE-EC--CCCCGGGHHHHHGGGSSCEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCcCCHHHHHHHHHHhCCCc-cc--CHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999998888877 9998888 5  777665544 444 322 22  22222221       2478999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++|
T Consensus        77 v~~Ag   81 (244)
T 1zmo_A           77 VSNDY   81 (244)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=95.54  E-value=0.066  Score=44.84  Aligned_cols=73  Identities=19%  Similarity=0.284  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCE-EEeCCCCChh---hhc-------cC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADK-VIDYRKTKYE---DIE-------EK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~---~~~-------~~  212 (327)
                      .++++||+||+|.+|.+++..+... |.+++++.+++++.+.+    ++.+... .+..+-.+..   ...       .+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEA-GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999988888877 99999988887654332    2234332 2222212221   111       37


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|+++.++|
T Consensus        91 id~vi~~Ag   99 (260)
T 3awd_A           91 VDILVACAG   99 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.54  E-value=0.068  Score=44.89  Aligned_cols=72  Identities=22%  Similarity=0.292  Sum_probs=47.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc--HHHH-HHc---CCCEE-EeCCCCChhh---h-------cc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK--VEFV-KEL---GADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~--~~~~-~~~---g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      +++++|+||+|++|.+++..+... |++++++.+++++  .+.+ +++   +.... +..+-.+..+   .       ..
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAAD-GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999988888777 9999988887665  3322 332   43322 2111122111   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        81 ~iD~lv~nAg   90 (258)
T 3a28_C           81 GFDVLVNNAG   90 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.54  E-value=0.066  Score=45.63  Aligned_cols=35  Identities=20%  Similarity=0.303  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .++++||+||++++|.+++..+... |++++++.++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~~~   43 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEE-GADIILFDIC   43 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCeEEEEccc
Confidence            5789999999999999988888877 9999988865

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.53  E-value=0.041  Score=46.69  Aligned_cols=41  Identities=22%  Similarity=0.195  Sum_probs=33.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~  189 (327)
                      .++++||+||+|++|.+++..+... |++++++.+ ++++.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   51 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEGAAQR   51 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHH
Confidence            4689999999999999988888777 999999888 7665543

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=95.53  E-value=0.5  Score=41.34  Aligned_cols=135  Identities=17%  Similarity=0.197  Sum_probs=77.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-hhcCCcEEEEe-CCcccHH-HHHHcCCCEEEeCCCCChhhhcc--CccEEEeCCCCc-
Q 020320          150 QTIFIVGGAGGVGTLVIQLAK-HFYGASHVVAT-TSTPKVE-FVKELGADKVIDYRKTKYEDIEE--KFDVLYDTIGDC-  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~-~~~g~~~v~~~-~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~--~~d~v~d~~g~~-  223 (327)
                      -+|.|+| +|.+|...+..++ ...+.+++.+. +++++.+ .++++|...+.+    ++.+.+.  ++|+|+.++... 
T Consensus         9 ~~v~iiG-~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~----~~~~~l~~~~~D~V~i~tp~~~   83 (346)
T 3cea_A            9 LRAAIIG-LGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT----NYKDMIDTENIDAIFIVAPTPF   83 (346)
T ss_dssp             EEEEEEC-CSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES----CHHHHHTTSCCSEEEECSCGGG
T ss_pred             ceEEEEc-CCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC----CHHHHhcCCCCCEEEEeCChHh
Confidence            4789999 8999988777766 54366666554 5666654 446678755442    3444443  699999999743 


Q ss_pred             --hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCC-CceeeeCCCcccchh-hHHHHHHHHHhCCC
Q 020320          224 --KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESG-KLKAQIDPTGPYKFK-DVIEAFRYLETGRA  299 (327)
Q Consensus       224 --~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~~~~-~i~~a~~~~~~~~~  299 (327)
                        ..+..+++.| +.+.+..+.          ..+.+..+++.++.++. ....-.  ...+.+. .+..+.+.+.++ .
T Consensus        84 h~~~~~~al~~G-~~v~~eKp~----------~~~~~~~~~l~~~a~~~~~~~~~~--~~~~r~~p~~~~~~~~i~~g-~  149 (346)
T 3cea_A           84 HPEMTIYAMNAG-LNVFCEKPL----------GLDFNEVDEMAKVIKSHPNQIFQS--GFMRRYDDSYRYAKKIVDNG-D  149 (346)
T ss_dssp             HHHHHHHHHHTT-CEEEECSCC----------CSCHHHHHHHHHHHHTCTTSCEEC--CCGGGTCHHHHHHHHHHHTT-T
T ss_pred             HHHHHHHHHHCC-CEEEEcCCC----------CCCHHHHHHHHHHHHhCCCCeEEE--ecccccCHHHHHHHHHHHcC-C
Confidence              4556677765 444444322          13345566677777665 544321  2233332 244444444433 3


Q ss_pred             CceE
Q 020320          300 RGKV  303 (327)
Q Consensus       300 ~gk~  303 (327)
                      .|++
T Consensus       150 iG~i  153 (346)
T 3cea_A          150 IGKI  153 (346)
T ss_dssp             TCSE
T ss_pred             CCCe
Confidence            4444

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.52  E-value=0.027  Score=49.45  Aligned_cols=105  Identities=15%  Similarity=0.203  Sum_probs=75.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..+++.+.+.+.++|....      ++.+.+...|+++-++...    
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~------~l~ell~~aDvV~l~~P~t~~t~  215 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGW-GATLQYHEAKALDTQTEQRLGLRQV------ACSELFASSDFILLALPLNADTL  215 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTS-CCEEEEECSSCCCHHHHHHHTEEEC------CHHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEECCCCCcHhHHHhcCceeC------CHHHHHhhCCEEEEcCCCCHHHH
Confidence            478999999 999999999999988 9999988888766666667775321      3555567799999887521    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..|+++..++.++-...          .+   -+.+.+.+++|.+.
T Consensus       216 ~li~~~~l~~mk~gailIN~arg~~----------vd---~~aL~~aL~~g~i~  256 (330)
T 4e5n_A          216 HLVNAELLALVRPGALLVNPCRGSV----------VD---EAAVLAALERGQLG  256 (330)
T ss_dssp             TCBCHHHHTTSCTTEEEEECSCGGG----------BC---HHHHHHHHHHTSEE
T ss_pred             HHhCHHHHhhCCCCcEEEECCCCch----------hC---HHHHHHHHHhCCcc
Confidence                345677888888888753221          12   23456667777775

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=95.51  E-value=0.066  Score=46.03  Aligned_cols=74  Identities=23%  Similarity=0.221  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcCCch--HHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEEeCCCCChhh---h-------c
Q 020320          147 KTGQTIFIVGGAGG--VGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVIDYRKTKYED---I-------E  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g~--~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~---~-------~  210 (327)
                      -.++++||+||+|.  +|.+++..+... |++++++.++++..+.+    ++.+....+..+-.+..+   .       .
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            46789999999865  999988877777 99998888875533333    233422222222222211   1       1


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus       108 g~iD~lVnnAG  118 (293)
T 3grk_A          108 GKLDFLVHAIG  118 (293)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999987

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=95.51  E-value=0.051  Score=45.28  Aligned_cols=73  Identities=18%  Similarity=0.279  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcC--CC-EEEeCCCCChh---hh-------ccCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELG--AD-KVIDYRKTKYE---DI-------EEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g--~~-~v~~~~~~~~~---~~-------~~~~  213 (327)
                      .+++++|+||+|.+|.+++..+... |.+++++.+++++.+.. +++.  .. ..+..+-.+..   ..       ..++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999988888877 99999888887655443 3332  11 12222212211   11       1369


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus        84 d~li~~Ag   91 (251)
T 1zk4_A           84 STLVNNAG   91 (251)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.51  E-value=0.044  Score=46.47  Aligned_cols=71  Identities=20%  Similarity=0.310  Sum_probs=46.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---h-------ccCcc
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED---I-------EEKFD  214 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~-------~~~~d  214 (327)
                      ....++++||+||++++|.+++..+... |++++++.+++++..     +....+..+-.+..+   .       ..++|
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   83 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRY-GAKVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRID   83 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            3467899999999999999988888777 999998887765431     111122111122111   1       14799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus        84 ~lv~nAg   90 (269)
T 3vtz_A           84 ILVNNAG   90 (269)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.51  E-value=0.074  Score=45.42  Aligned_cols=73  Identities=21%  Similarity=0.262  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEEeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVIDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||+  |++|.+++..+... |++++++.++++..+.+    ++.+....+..+-.+...   .       ..
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHRE-GAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999998  89999988888777 99999888876522222    223422222222122111   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        99 ~iD~lv~~Ag  108 (285)
T 2p91_A           99 SLDIIVHSIA  108 (285)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.50  E-value=0.049  Score=45.42  Aligned_cols=73  Identities=25%  Similarity=0.413  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHH-H---HcCCCEE-EeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFV-K---ELGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~-~---~~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      .+++++|+||+|++|.++++.+... |.++++..+ ++++.+.+ +   +.+.... +..+-.+..+   .       ..
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQ-GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4688999999999999988888877 999998887 66554332 2   2343322 2211122211   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        82 ~id~lv~nAg   91 (246)
T 2uvd_A           82 QVDILVNNAG   91 (246)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.50  E-value=0.052  Score=48.00  Aligned_cols=87  Identities=22%  Similarity=0.311  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-hhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAK-HFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~-~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      -.|.++.|+| .|.+|...++.++ .. |.++++..+++++.+.+.++|...+     .+..+.+...|+++.++...  
T Consensus       161 l~g~~vgIIG-~G~IG~~vA~~l~~~~-G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~aDvVil~vp~~~~  233 (348)
T 2w2k_A          161 PRGHVLGAVG-LGAIQKEIARKAVHGL-GMKLVYYDVAPADAETEKALGAERV-----DSLEELARRSDCVSVSVPYMKL  233 (348)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHHHHCSEEEECCCCSGG
T ss_pred             CCCCEEEEEE-ECHHHHHHHHHHHHhc-CCEEEEECCCCcchhhHhhcCcEEe-----CCHHHHhccCCEEEEeCCCChH
Confidence            4578999999 9999999999999 87 9999888888777666666775421     23445566789999887531  


Q ss_pred             ------hhhhhhhcCCCcEEEee
Q 020320          224 ------KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ------~~~~~~l~~~g~~v~~g  240 (327)
                            ...+..++++..++..+
T Consensus       234 t~~li~~~~l~~mk~gailin~s  256 (348)
T 2w2k_A          234 THHLIDEAFFAAMKPGSRIVNTA  256 (348)
T ss_dssp             GTTCBCHHHHHHSCTTEEEEECS
T ss_pred             HHHHhhHHHHhcCCCCCEEEECC
Confidence                  23456677777776654

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.48  E-value=0.14  Score=43.33  Aligned_cols=96  Identities=14%  Similarity=0.207  Sum_probs=63.6

Q ss_pred             ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh
Q 020320          129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKELGADKVIDYRKTKY  206 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (327)
                      ++|++...+...++..+ --.|++++|+|++..+|..++.++...+ ++++.+.-+                   +..+.
T Consensus       137 ~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~-------------------~t~~L  197 (281)
T 2c2x_A          137 PLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHT-------------------GTRDL  197 (281)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECT-------------------TCSCH
T ss_pred             CCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEEC-------------------chhHH
Confidence            34555444555555544 3578999999965567999888888763 455544322                   22445


Q ss_pred             hhhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCCC
Q 020320          207 EDIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       207 ~~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~~  243 (327)
                      .+..+.+|++|.++|..+. .-..++++..++.+|.+.
T Consensus       198 ~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          198 PALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             HHHHTTCSEEEECSCCTTCBCGGGSCTTCEEEECCEEE
T ss_pred             HHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEccCCC
Confidence            5566789999999996632 224568888888887654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=95.48  E-value=0.041  Score=46.56  Aligned_cols=73  Identities=19%  Similarity=0.277  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cC-CCEE--EeCCCCChh------hhccCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LG-ADKV--IDYRKTKYE------DIEEKFD  214 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g-~~~v--~~~~~~~~~------~~~~~~d  214 (327)
                      .++++||+||++++|.+.++.+... |+++++..+++++.+.+ ++   .+ ...+  +..+-.+..      +...++|
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   87 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAE-GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD   87 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence            5789999999999999988877777 99999999887654333 22   22 1111  111112211      1224799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus        88 ~lv~nAg   94 (267)
T 3t4x_A           88 ILINNLG   94 (267)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=95.48  E-value=0.064  Score=45.27  Aligned_cols=40  Identities=18%  Similarity=0.224  Sum_probs=34.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE  188 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~  188 (327)
                      .+++++|+||+|++|.+.++.+... |.+++++.+++++.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~   45 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGV   45 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEEECCHHHHH
Confidence            5789999999999999998888877 999999888876554

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=95.45  E-value=0.065  Score=46.13  Aligned_cols=98  Identities=15%  Similarity=0.242  Sum_probs=66.5

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhhccCccEE
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~d~v  216 (327)
                      +....++++++||-+| ||. |..+..+++.. +.+++.++.+++..+.+++    .|...-+.....++.+....+|+|
T Consensus        65 ~~~~~~~~~~~vLDiG-cG~-G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v  141 (302)
T 3hem_A           65 LDKLNLEPGMTLLDIG-CGW-GSTMRHAVAEY-DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRI  141 (302)
T ss_dssp             HHTTCCCTTCEEEEET-CTT-SHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEE
T ss_pred             HHHcCCCCcCEEEEee-ccC-cHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEE
Confidence            3567889999999999 775 88889999987 7889999999888777754    343211111111222224578999


Q ss_pred             EeCCC--C----------------chhhhhhhcCCCcEEEeeC
Q 020320          217 YDTIG--D----------------CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       217 ~d~~g--~----------------~~~~~~~l~~~g~~v~~g~  241 (327)
                      +....  .                ...+.+.|+|+|+++....
T Consensus       142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence            85421  1                1345678999999987654

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=95.44  E-value=0.049  Score=45.85  Aligned_cols=73  Identities=15%  Similarity=0.226  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccHHHH-H---HcCCCEE-EeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFV-K---ELGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~~~~-~---~~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||+|++|.+++..+... |+++++. .+++++.+.+ +   +.+.... +..+-.+..+   .       ..
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~-G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAEN-GYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988888877 9998887 5666554333 2   2343322 2222222211   1       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        82 ~id~lv~nAg   91 (258)
T 3oid_A           82 RLDVFVNNAA   91 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.44  E-value=0.06  Score=48.79  Aligned_cols=89  Identities=20%  Similarity=0.255  Sum_probs=65.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh--hhh--ccCccEEEeCCCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY--EDI--EEKFDVLYDTIGDC  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~~--~~~~d~v~d~~g~~  223 (327)
                      .+++|+|+| .|.+|..+++.++.. |..+++++.++++.+.+++.|...+. .+..+.  ...  +.++|+++-+++..
T Consensus         3 ~~~~viIiG-~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~~g~~vi~-GDat~~~~L~~agi~~A~~viv~~~~~   79 (413)
T 3l9w_A            3 HGMRVIIAG-FGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRKFGMKVFY-GDATRMDLLESAGAAKAEVLINAIDDP   79 (413)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHHTTCCCEE-SCTTCHHHHHHTTTTTCSEEEECCSSH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHhCCCeEEE-cCCCCHHHHHhcCCCccCEEEECCCCh
Confidence            456899999 899999999999998 99999999999999999998876443 333322  221  36799999999854


Q ss_pred             ------hhhhhhhcCCCcEEEe
Q 020320          224 ------KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 ------~~~~~~l~~~g~~v~~  239 (327)
                            -...+.+.+..+++..
T Consensus        80 ~~n~~i~~~ar~~~p~~~Iiar  101 (413)
T 3l9w_A           80 QTNLQLTEMVKEHFPHLQIIAR  101 (413)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHHHHHHHHHHHhCCCCeEEEE
Confidence                  1233455666666654

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.42  E-value=0.047  Score=48.31  Aligned_cols=85  Identities=25%  Similarity=0.264  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..++. +.+.+.+.|...+     .++.+.+...|+++-++...    
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~-G~~V~~~d~~~-~~~~~~~~g~~~~-----~~l~ell~~aDiV~l~~Plt~~t~  230 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAF-GMNVLVWGREN-SKERARADGFAVA-----ESKDALFEQSDVLSVHLRLNDETR  230 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSHH-HHHHHHHTTCEEC-----SSHHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhC-CCEEEEECCCC-CHHHHHhcCceEe-----CCHHHHHhhCCEEEEeccCcHHHH
Confidence            478999999 999999999999998 99998888764 3345566776422     23555567789999877521    


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          ...+..|+++..++.++
T Consensus       231 ~li~~~~l~~mk~gailIN~a  251 (352)
T 3gg9_A          231 SIITVADLTRMKPTALFVNTS  251 (352)
T ss_dssp             TCBCHHHHTTSCTTCEEEECS
T ss_pred             HhhCHHHHhhCCCCcEEEECC
Confidence                34567788888888875

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.42  E-value=0.048  Score=46.79  Aligned_cols=42  Identities=19%  Similarity=0.284  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCC---cEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGA---SHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~---~~v~~~~~~~~~~~~  190 (327)
                      .++++||+||++++|.+++..+... |+   ++++..+++++.+.+
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~-G~~~~~V~~~~r~~~~~~~~   76 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEA-SNGDMKLILAARRLEKLEEL   76 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHH-HTTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCCCceEEEEECCHHHHHHH
Confidence            4689999999999999987766555 65   888888887765544

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.42  E-value=0.078  Score=45.59  Aligned_cols=41  Identities=24%  Similarity=0.524  Sum_probs=34.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      .+++++|+||+|.+|.+++..+... |.+++++.+++++.+.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~   57 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKS   57 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            4689999999999999988888777 9999998888765543

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.41  E-value=0.11  Score=44.33  Aligned_cols=95  Identities=16%  Similarity=0.109  Sum_probs=65.6

Q ss_pred             ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      ++|++.......++... --.|.+++|+|++..+|.-++.++... |+++.+..+..                   .+..
T Consensus       138 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~t-------------------~~L~  197 (288)
T 1b0a_A          138 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-GCTTTVTHRFT-------------------KNLR  197 (288)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-TCEEEEECSSC-------------------SCHH
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-CCeEEEEeCCc-------------------hhHH
Confidence            44655544555555544 357899999996667899999999988 88776654322                   3344


Q ss_pred             hhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~~  243 (327)
                      +..+.+|+++.++|..+. .-..++++..++.+|.+.
T Consensus       198 ~~~~~ADIVI~Avg~p~lI~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          198 HHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             HHHHHCSEEEECSCCTTCBCTTTSCTTCEEEECCCEE
T ss_pred             HHhccCCEEEECCCCcCcCCHHHcCCCcEEEEccCCc
Confidence            555678999999996632 224568888888888654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.39  E-value=0.073  Score=45.31  Aligned_cols=35  Identities=26%  Similarity=0.303  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT  182 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~  182 (327)
                      -.++++||+||++++|.++++.+... |++++++.+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~-G~~V~~~~r   47 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAE-GADIIACDI   47 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEec
Confidence            46789999999999999988888777 999998876

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.39  E-value=0.048  Score=47.43  Aligned_cols=80  Identities=20%  Similarity=0.294  Sum_probs=50.0

Q ss_pred             HHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCC---cccHHH-HHHc----CCC-EEEeCCC-CChh
Q 020320          140 GFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTS---TPKVEF-VKEL----GAD-KVIDYRK-TKYE  207 (327)
Q Consensus       140 ~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~---~~~~~~-~~~~----g~~-~v~~~~~-~~~~  207 (327)
                      +++..+. -.+++++|+| +|++|.+++..+... |+ +++++.++   .++.+. ++++    +.. .+++..+ +++.
T Consensus       144 ~L~~~~~~l~gk~~lVlG-aGG~g~aia~~L~~~-Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~  221 (315)
T 3tnl_A          144 ALKEAGHDIIGKKMTICG-AGGAATAICIQAALD-GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLR  221 (315)
T ss_dssp             HHHHTTCCCTTSEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             HHHHcCCCccCCEEEEEC-CChHHHHHHHHHHHC-CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHH
Confidence            3444333 3688999999 699999998888888 87 66677777   444332 2333    221 1233322 1233


Q ss_pred             hhccCccEEEeCCC
Q 020320          208 DIEEKFDVLYDTIG  221 (327)
Q Consensus       208 ~~~~~~d~v~d~~g  221 (327)
                      ..+..+|++++++.
T Consensus       222 ~~l~~aDiIINaTp  235 (315)
T 3tnl_A          222 KEIAESVIFTNATG  235 (315)
T ss_dssp             HHHHTCSEEEECSS
T ss_pred             hhhcCCCEEEECcc
Confidence            34568999999975

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.38  E-value=0.058  Score=45.04  Aligned_cols=74  Identities=20%  Similarity=0.319  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC-cccHHHH-HH---cCCCE-EEeCCCCChhh---hc-------c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS-TPKVEFV-KE---LGADK-VIDYRKTKYED---IE-------E  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~-~~~~~~~-~~---~g~~~-v~~~~~~~~~~---~~-------~  211 (327)
                      .+++++|+||+|.+|.+++..+... |.+++++.++ +++.+.+ ++   .+... .+..+-.+...   ..       .
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARA-GAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999988888877 9999988887 6655433 22   24221 12212122211   11       3


Q ss_pred             CccEEEeCCCC
Q 020320          212 KFDVLYDTIGD  222 (327)
Q Consensus       212 ~~d~v~d~~g~  222 (327)
                      ++|++++++|.
T Consensus        85 ~id~vi~~Ag~   95 (258)
T 3afn_B           85 GIDVLINNAGG   95 (258)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.38  E-value=0.053  Score=47.37  Aligned_cols=86  Identities=14%  Similarity=0.088  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..+ ++++ ..+.++|+.. .    .+..+.....|+++-++...   
T Consensus       145 ~g~~vgIIG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~-~~~~~~g~~~-~----~~l~ell~~aDvVil~~p~~~~t  216 (320)
T 1gdh_A          145 DNKTLGIYG-FGSIGQALAKRAQGF-DMDIDYFDTHRASS-SDEASYQATF-H----DSLDSLLSVSQFFSLNAPSTPET  216 (320)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSCCCH-HHHHHHTCEE-C----SSHHHHHHHCSEEEECCCCCTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCcCh-hhhhhcCcEE-c----CCHHHHHhhCCEEEEeccCchHH
Confidence            578999999 999999999999988 899888888 7665 4556677642 1    13445567899999887621   


Q ss_pred             -----hhhhhhhcCCCcEEEeeC
Q 020320          224 -----KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       224 -----~~~~~~l~~~g~~v~~g~  241 (327)
                           ...+..++++..++.++.
T Consensus       217 ~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          217 RYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             TTCBSHHHHTTSCTTEEEEECSC
T ss_pred             HhhcCHHHHhhCCCCcEEEECCC
Confidence                 234567888888777753

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.38  E-value=0.033  Score=48.15  Aligned_cols=68  Identities=19%  Similarity=0.295  Sum_probs=46.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCChhhhccCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      .+|||+||+|.+|...+..+... |.+++++++++.+.. +.  +...+. |.....+.+...++|+||.+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~   71 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKND-GNTPIILTRSIGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAA   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCC--------CCEEEECCCCHHHHHHHTTTCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCCCCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEccc
Confidence            68999999999999999888887 899999998755544 33  333322 2111222334578999999987

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.37  E-value=0.054  Score=45.21  Aligned_cols=73  Identities=25%  Similarity=0.384  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCEE-EeCCCCChh---hhc-------cC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADKV-IDYRKTKYE---DIE-------EK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~v-~~~~~~~~~---~~~-------~~  212 (327)
                      .++++||+||+|.+|.+++..+... |.+++++.+++++.+.+ +   +.+.... +..+-.+..   ...       .+
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999988888877 89999888887654433 2   2343322 211112211   111       37


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|+++.++|
T Consensus        89 ~d~vi~~Ag   97 (255)
T 1fmc_A           89 VDILVNNAG   97 (255)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.35  E-value=0.023  Score=49.75  Aligned_cols=71  Identities=13%  Similarity=0.183  Sum_probs=47.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      .+|||+||+|.+|...+..+... |.+++++++++.+.+.+.+.+...+. |-.+ ..+.....++|+||.+++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~   86 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAA-GHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG   86 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC-CCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            47999999999999998888877 89999998876654333333443322 2111 123334568999999987

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.35  E-value=0.076  Score=45.30  Aligned_cols=73  Identities=21%  Similarity=0.282  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHH-HHc----CCCEE-EeCCCCChhh---h-------c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFV-KEL----GADKV-IDYRKTKYED---I-------E  210 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~-~~~----g~~~v-~~~~~~~~~~---~-------~  210 (327)
                      .++++||+||++++|.+++..+... |++++++.+ ++++.+.+ +++    +.... +..+-.+..+   .       .
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKA-GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            4689999999999999988888777 999888887 44443333 222    32222 1111112111   1       1


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus       103 g~iD~lv~nAg  113 (281)
T 3v2h_A          103 GGADILVNNAG  113 (281)
T ss_dssp             SSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.34  E-value=0.077  Score=46.51  Aligned_cols=85  Identities=25%  Similarity=0.353  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|.+|.|+| .|.+|...++.++.. |.++++.++++++.+.+.++|....      ++.+.+...|+++.++...    
T Consensus       154 ~g~~vgIIG-~G~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~------~l~e~l~~aDvVi~~vp~~~~t~  225 (330)
T 2gcg_A          154 TQSTVGIIG-LGRIGQAIARRLKPF-GVQRFLYTGRQPRPEEAAEFQAEFV------STPELAAQSDFIVVACSLTPATE  225 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-TCCEEEEESSSCCHHHHHTTTCEEC------CHHHHHHHCSEEEECCCCCTTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCcchhHHHhcCceeC------CHHHHHhhCCEEEEeCCCChHHH
Confidence            477999999 899999999999988 9999988887776666666664321      3445566899999988631    


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          ...+..++++..++..+
T Consensus       226 ~~i~~~~~~~mk~gailIn~s  246 (330)
T 2gcg_A          226 GLCNKDFFQKMKETAVFINIS  246 (330)
T ss_dssp             TCBSHHHHHHSCTTCEEEECS
T ss_pred             HhhCHHHHhcCCCCcEEEECC
Confidence                23456677777666554

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=95.34  E-value=0.08  Score=43.55  Aligned_cols=71  Identities=17%  Similarity=0.204  Sum_probs=47.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCE-EEeCCCCChhh---hc----cCccEEEeCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADK-VIDYRKTKYED---IE----EKFDVLYDTI  220 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~---~~----~~~d~v~d~~  220 (327)
                      +++||+||+|++|.+++..+... |++++++.+++++.+.+. +++... .+..+-.+...   ..    ...|++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAE-GKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            46899999999999988888877 999999999888766553 444221 11111122111   11    2359999998


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        81 g   81 (230)
T 3guy_A           81 G   81 (230)
T ss_dssp             C
T ss_pred             C
Confidence            7

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.34  E-value=0.058  Score=45.42  Aligned_cols=73  Identities=15%  Similarity=0.316  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHh-hcCCcEEEEeCCcccHHHH-HH---cCCC-EEEeCCCCChhh---hc-------c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKH-FYGASHVVATTSTPKVEFV-KE---LGAD-KVIDYRKTKYED---IE-------E  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~-~~g~~~v~~~~~~~~~~~~-~~---~g~~-~v~~~~~~~~~~---~~-------~  211 (327)
                      .++++||+||+|.+|.+++..+.. . |.+++++.++.++.+.+ ++   .+.. ..+..+-.+...   ..       .
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhc-CCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999998887776 6 89999988886654332 22   2422 222222222211   11       3


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        82 ~id~li~~Ag   91 (276)
T 1wma_A           82 GLDVLVNNAG   91 (276)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.33  E-value=0.09  Score=44.57  Aligned_cols=84  Identities=23%  Similarity=0.313  Sum_probs=57.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc-----
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC-----  223 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-----  223 (327)
                      +++++|+| +|+.|.+++..+... |.++.++.++.++.+.+.+++.. +....+      +..+|++++++...     
T Consensus       118 ~k~vlvlG-aGGaaraia~~L~~~-G~~v~V~nRt~~ka~~la~~~~~-~~~~~~------l~~~DiVInaTp~Gm~~~~  188 (269)
T 3phh_A          118 YQNALILG-AGGSAKALACELKKQ-GLQVSVLNRSSRGLDFFQRLGCD-CFMEPP------KSAFDLIINATSASLHNEL  188 (269)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCTTHHHHHHHTCE-EESSCC------SSCCSEEEECCTTCCCCSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCe-EecHHH------hccCCEEEEcccCCCCCCC
Confidence            89999999 799999999888888 77777777888876544477743 222221      12799999997521     


Q ss_pred             ---hhh-hhhhcCCCcEEEeeC
Q 020320          224 ---KNS-FVVAKDNAPIVDITW  241 (327)
Q Consensus       224 ---~~~-~~~l~~~g~~v~~g~  241 (327)
                         ... ...++++..++++-.
T Consensus       189 ~l~~~~l~~~l~~~~~v~D~vY  210 (269)
T 3phh_A          189 PLNKEVLKGYFKEGKLAYDLAY  210 (269)
T ss_dssp             SSCHHHHHHHHHHCSEEEESCC
T ss_pred             CCChHHHHhhCCCCCEEEEeCC
Confidence               111 125667777766643

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.32  E-value=0.066  Score=45.14  Aligned_cols=37  Identities=19%  Similarity=0.251  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .++++||+||++++|.+++..+... |+++++..++..
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~   46 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALE-SVNLVLHYHQAK   46 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTS-SCEEEEEESCGG
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecCcc
Confidence            5789999999999999988888877 999988876543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.32  E-value=0.064  Score=45.47  Aligned_cols=73  Identities=19%  Similarity=0.310  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHH----HHcCCCEE-EeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFV----KELGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~----~~~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||++++|.+++..+... |+++++..+ ++++.+.+    ++.+.... +..+-.+..+   .       ..
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAA-GAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988887777 999988886 44443332    23343322 2222222211   1       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       106 ~id~lv~nAg  115 (269)
T 4dmm_A          106 RLDVLVNNAG  115 (269)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.32  E-value=0.069  Score=45.66  Aligned_cols=39  Identities=13%  Similarity=0.201  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-ccH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKV  187 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-~~~  187 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++ ++.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~   61 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQT-GYRVVIHYHNSAEAA   61 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHH-TCEEEEEESSCHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCeEEEEeCCchHHH
Confidence            4789999999999999988888877 99999988876 544

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=95.32  E-value=0.091  Score=44.64  Aligned_cols=35  Identities=26%  Similarity=0.312  Sum_probs=30.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT  182 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~  182 (327)
                      -.++++||+||++++|.+++..+... |++++++.+
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~-G~~V~~~~r   43 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAE-GADIIAVDI   43 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEec
Confidence            35789999999999999988888877 999998876

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.31  E-value=0.072  Score=45.68  Aligned_cols=41  Identities=15%  Similarity=0.136  Sum_probs=34.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~  189 (327)
                      .++++||+||++++|.+++..+... |++++++. +++++.+.
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~~r~~~~~~~   49 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANA   49 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEcCCCHHHHHH
Confidence            4689999999999999988888877 99999998 88765543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.29  E-value=0.1  Score=44.05  Aligned_cols=38  Identities=13%  Similarity=0.304  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      .++++||+||+|++|.+++..+... |.+++++.+++++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~   44 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDE-GSKVIDLSIHDPG   44 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEecCccc
Confidence            4689999999999999988888877 9999988887655

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.28  E-value=0.045  Score=46.52  Aligned_cols=42  Identities=19%  Similarity=0.305  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   46 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEET   46 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4688999999999999988888777 99999999887765443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.27  E-value=0.07  Score=45.58  Aligned_cols=73  Identities=15%  Similarity=0.327  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCEE-EeCCCCChhh---h-------ccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADKV-IDYRKTKYED---I-------EEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~v-~~~~~~~~~~---~-------~~~  212 (327)
                      .+++++|+||+|.+|.+++..+... |.++++..+++++.+.+ ++   .+.... +..+-.+...   .       ..+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999998888877 89988877776654433 22   243322 2111122111   1       147


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|+++.++|
T Consensus       122 id~li~~Ag  130 (285)
T 2c07_A          122 VDILVNNAG  130 (285)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=95.26  E-value=0.057  Score=45.46  Aligned_cols=73  Identities=18%  Similarity=0.337  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCEE-EeCCCCChh---hhc--------c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADKV-IDYRKTKYE---DIE--------E  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~v-~~~~~~~~~---~~~--------~  211 (327)
                      .++++||+||+|.+|.+++..+... |.+++++.+++++.+.+ +   +.+.... +..+-.+..   ...        .
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5689999999999999998888877 99999888887655433 2   2343321 211212211   111        5


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        92 ~id~li~~Ag  101 (266)
T 1xq1_A           92 KLDILINNLG  101 (266)
T ss_dssp             CCSEEEEECC
T ss_pred             CCcEEEECCC
Confidence            7899999887

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=95.25  E-value=0.041  Score=48.26  Aligned_cols=69  Identities=16%  Similarity=0.215  Sum_probs=46.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      -..+++|||+||+|.+|..++..+... |.+++++++++.+      .+...+. |-.+ ..+.....++|+|+.+++
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   86 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQ-GRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGA   86 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHT-TCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence            356788999999999999999888888 8999999987665      2333332 2211 123334568999999887

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.24  E-value=0.096  Score=44.29  Aligned_cols=73  Identities=27%  Similarity=0.510  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH-HHHcCC--CE-EEeCCCCChhh---hc-------cCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF-VKELGA--DK-VIDYRKTKYED---IE-------EKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~-~~~~g~--~~-v~~~~~~~~~~---~~-------~~~  213 (327)
                      .++++||+||+|.+|.+++..+... |.+++++.+++++.+. .++++.  .. .+..+-.+..+   ..       .++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999988888777 9999988887665433 344432  11 22212122211   11       379


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus        94 d~li~~Ag  101 (278)
T 2bgk_A           94 DIMFGNVG  101 (278)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999887

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.24  E-value=0.095  Score=44.70  Aligned_cols=35  Identities=23%  Similarity=0.330  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .++++||+||++++|.+++..+... |++++++.++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~-G~~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQE-GADIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEecc
Confidence            5789999999999999988888777 9999988765

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.23  E-value=0.084  Score=46.39  Aligned_cols=84  Identities=24%  Similarity=0.342  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .+.++.|+| .|.+|...++.++.. |.++++..+++++ +.+.++|...      .++.+.+...|+++.++...    
T Consensus       149 ~g~~vgIIG-~G~iG~~iA~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~------~~l~~~l~~aDvVil~vp~~~~t~  219 (334)
T 2dbq_A          149 YGKTIGIIG-LGRIGQAIAKRAKGF-NMRILYYSRTRKE-EVERELNAEF------KPLEDLLRESDFVVLAVPLTRETY  219 (334)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCH-HHHHHHCCEE------CCHHHHHHHCSEEEECCCCCTTTT
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhC-CCEEEEECCCcch-hhHhhcCccc------CCHHHHHhhCCEEEECCCCChHHH
Confidence            578999999 899999999999987 9999888887766 5566666531      13445567899999988632    


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          ...+..++++..++..+
T Consensus       220 ~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          220 HLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             TCBCHHHHHHSCTTCEEEECS
T ss_pred             HhhCHHHHhcCCCCcEEEECC
Confidence                13456678887777665

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.23  E-value=0.058  Score=45.10  Aligned_cols=71  Identities=14%  Similarity=0.296  Sum_probs=48.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EEeCCCCChhh---h-------ccCccEEE
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VIDYRKTKYED---I-------EEKFDVLY  217 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~---~-------~~~~d~v~  217 (327)
                      ++++|+||+|++|.+++..+... |++++++.+++++.+.+ ++++... .+..+-.+..+   .       ..++|+++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            46899999999999988888877 99999988887765544 4454322 12111122111   1       13689999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      +++|
T Consensus        80 nnAg   83 (248)
T 3asu_A           80 NNAG   83 (248)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=95.23  E-value=0.068  Score=46.51  Aligned_cols=99  Identities=18%  Similarity=0.213  Sum_probs=65.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cCCCEE--EeCCCCChhhhccC
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LGADKV--IDYRKTKYEDIEEK  212 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~~~~~  212 (327)
                      .+....++++++||-+| ||. |..+..+++... ..+++.++.+++..+.+++    .|.+.+  +..+..+.......
T Consensus        67 l~~~l~~~~~~~VLDiG-cG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~  144 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIG-GGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSP  144 (317)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred             HHHhcCCCCcCEEEEec-CCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCC
Confidence            34567888999999999 777 888888888752 1358888889888777754    354332  22111111112246


Q ss_pred             ccEEEeCCC--C-chhhhhhhcCCCcEEEee
Q 020320          213 FDVLYDTIG--D-CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       213 ~d~v~d~~g--~-~~~~~~~l~~~g~~v~~g  240 (327)
                      +|+|+....  . .....+.|+|+|+++..-
T Consensus       145 fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          145 YDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             EEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             eEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            899986643  2 266778999999988763

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=95.22  E-value=0.15  Score=42.91  Aligned_cols=73  Identities=18%  Similarity=0.204  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCch--HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCC-C-EEE--eCCCCC-hhhh-------
Q 020320          148 TGQTIFIVGGAGG--VGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGA-D-KVI--DYRKTK-YEDI-------  209 (327)
Q Consensus       148 ~~~~vlI~ga~g~--~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~-~-~v~--~~~~~~-~~~~-------  209 (327)
                      .++++||+||+|.  +|.+.+..+... |++++++.++++..+.+++    ++. . ..+  |-.+.. ....       
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            5789999999955  999988877777 9999988887665444433    332 1 122  222211 1111       


Q ss_pred             ccCccEEEeCCC
Q 020320          210 EEKFDVLYDTIG  221 (327)
Q Consensus       210 ~~~~d~v~d~~g  221 (327)
                      ..++|++++++|
T Consensus        85 ~g~id~li~~Ag   96 (266)
T 3oig_A           85 VGVIHGIAHCIA   96 (266)
T ss_dssp             HSCCCEEEECCC
T ss_pred             hCCeeEEEEccc
Confidence            147899999886

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.22  E-value=0.073  Score=45.07  Aligned_cols=73  Identities=19%  Similarity=0.367  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC-cccHHHH----HHcCCCEE-EeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS-TPKVEFV----KELGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~-~~~~~~~----~~~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||+|++|.+++..+... |++++++.++ ++..+.+    ++.+.... +..+-.+..+   .       ..
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASM-GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999988877777 9999988874 3333322    33443322 2222222211   1       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       107 ~id~li~nAg  116 (271)
T 4iin_A          107 GLSYLVNNAG  116 (271)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.21  E-value=0.079  Score=44.24  Aligned_cols=68  Identities=15%  Similarity=0.249  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh---hh-------ccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE---DI-------EEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~~-------~~~~d~v~  217 (327)
                      .++++||+||+|++|.+.+..+... |++++++.++++.    ++.+.. .+..+-.+..   ..       ..++|+++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~----~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEA-GAKVTGFDQAFTQ----EQYPFA-TEVMDVADAAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCCCS----SCCSSE-EEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCchhh----hcCCce-EEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999988888877 9999988887653    123322 2211112211   11       13799999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      +++|
T Consensus        80 ~~Ag   83 (250)
T 2fwm_X           80 NAAG   83 (250)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.21  E-value=0.073  Score=44.84  Aligned_cols=74  Identities=23%  Similarity=0.384  Sum_probs=48.5

Q ss_pred             CCCCEEEEEcCCc-hHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc---C-CCE-EEeCCCCChhh---h-------
Q 020320          147 KTGQTIFIVGGAG-GVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL---G-ADK-VIDYRKTKYED---I-------  209 (327)
Q Consensus       147 ~~~~~vlI~ga~g-~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~---g-~~~-v~~~~~~~~~~---~-------  209 (327)
                      -.++++||+||+| ++|.+++..+... |++++++.+++++.+.+ +++   + ... .+..+-.+..+   .       
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK   98 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            3578999999876 8999988887777 99999998887765443 222   2 121 12111122111   1       


Q ss_pred             ccCccEEEeCCC
Q 020320          210 EEKFDVLYDTIG  221 (327)
Q Consensus       210 ~~~~d~v~d~~g  221 (327)
                      ..++|++++++|
T Consensus        99 ~g~id~li~~Ag  110 (266)
T 3o38_A           99 AGRLDVLVNNAG  110 (266)
T ss_dssp             HSCCCEEEECCC
T ss_pred             hCCCcEEEECCC
Confidence            147899999988

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.21  E-value=0.082  Score=44.32  Aligned_cols=71  Identities=20%  Similarity=0.259  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCCChhh---h------ccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKTKYED---I------EEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~---~------~~~~d~v~  217 (327)
                      .++++||+||++++|.++++.+... |++++++.++.+  +..++++.... +..+-.+..+   .      ..++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDA-GAQVVVLDIRGE--DVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCH--HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCchH--HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            4689999999999999988877777 999998887433  34455554332 2111122111   1      13799999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      +++|
T Consensus        85 ~nAg   88 (257)
T 3tl3_A           85 NCAG   88 (257)
T ss_dssp             ECGG
T ss_pred             ECCC
Confidence            9987

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=95.19  E-value=0.088  Score=44.06  Aligned_cols=98  Identities=14%  Similarity=0.230  Sum_probs=68.0

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCC--E--EEeCCCCChhhhccCccEE
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGAD--K--VIDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~~~~d~v  216 (327)
                      +....+.++.+||-+| || .|..+..+++.. +.+++.++.+++..+.+++....  .  ++..+-.........+|+|
T Consensus        48 ~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v  124 (266)
T 3ujc_A           48 LSDIELNENSKVLDIG-SG-LGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLI  124 (266)
T ss_dssp             TTTCCCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEE
T ss_pred             HHhcCCCCCCEEEEEC-CC-CCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEE
Confidence            4556788999999999 76 788888999987 88999999999999888775432  1  1222211111112468999


Q ss_pred             EeCCC--C---------chhhhhhhcCCCcEEEeeC
Q 020320          217 YDTIG--D---------CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       217 ~d~~g--~---------~~~~~~~l~~~g~~v~~g~  241 (327)
                      +....  .         +..+.+.|+|+|.++....
T Consensus       125 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          125 YSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            86432  1         1455678999999987753

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.17  E-value=0.11  Score=44.30  Aligned_cols=75  Identities=20%  Similarity=0.278  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHH----HHcCCCEE-E--eCCCC-Chhhh-------c
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFV----KELGADKV-I--DYRKT-KYEDI-------E  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~----~~~g~~~v-~--~~~~~-~~~~~-------~  210 (327)
                      ..++++||+||++++|.+++..+... |++++++.+ ++++.+.+    ++.+.... +  |-.+. .....       .
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAAS-GFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999988888877 999988884 55543322    23343322 2  22221 11111       1


Q ss_pred             cCccEEEeCCCC
Q 020320          211 EKFDVLYDTIGD  222 (327)
Q Consensus       211 ~~~d~v~d~~g~  222 (327)
                      .++|++++++|.
T Consensus       106 g~iD~lvnnAg~  117 (280)
T 4da9_A          106 GRIDCLVNNAGI  117 (280)
T ss_dssp             SCCCEEEEECC-
T ss_pred             CCCCEEEECCCc
Confidence            379999998873

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=95.17  E-value=0.16  Score=37.73  Aligned_cols=72  Identities=24%  Similarity=0.201  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCCChhh----hccCccEEEeCCCCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKTKYED----IEEKFDVLYDTIGDC  223 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~----~~~~~d~v~d~~g~~  223 (327)
                      +.+++|+| +|.+|...++.+... |.+++++++++++.+.+. +++... +..+..+...    ...++|+++.+++..
T Consensus         4 ~m~i~IiG-~G~iG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~~~~~~-~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   80 (140)
T 1lss_A            4 GMYIIIAG-IGRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEIDALV-INGDCTKIKTLEDAGIEDADMYIAVTGKE   80 (140)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCSSEE-EESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHhcCcEE-EEcCCCCHHHHHHcCcccCCEEEEeeCCc
Confidence            46799998 799999998888877 888888888887776665 356543 3222222211    145799999998753

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.17  E-value=0.051  Score=46.33  Aligned_cols=42  Identities=24%  Similarity=0.405  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   46 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEET   46 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988888877 99999998887765443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.16  E-value=0.076  Score=46.20  Aligned_cols=36  Identities=28%  Similarity=0.301  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      -.++++||+||++++|.+++..+... |+++++++++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~   79 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQD-GADIVAIDLC   79 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC-CCeEEEEecc
Confidence            35789999999999999988888877 9999988754

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.15  E-value=0.078  Score=47.08  Aligned_cols=84  Identities=21%  Similarity=0.298  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC-----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD-----  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~-----  222 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..++. +.+.+.+.|+..      .++.+.+...|+++-++..     
T Consensus       175 ~gktvGIIG-lG~IG~~vA~~l~~f-G~~V~~~d~~~-~~~~~~~~g~~~------~~l~ell~~aDvV~l~~Plt~~T~  245 (365)
T 4hy3_A          175 AGSEIGIVG-FGDLGKALRRVLSGF-RARIRVFDPWL-PRSMLEENGVEP------ASLEDVLTKSDFIFVVAAVTSENK  245 (365)
T ss_dssp             SSSEEEEEC-CSHHHHHHHHHHTTS-CCEEEEECSSS-CHHHHHHTTCEE------CCHHHHHHSCSEEEECSCSSCC--
T ss_pred             CCCEEEEec-CCcccHHHHHhhhhC-CCEEEEECCCC-CHHHHhhcCeee------CCHHHHHhcCCEEEEcCcCCHHHH
Confidence            378999999 999999999999988 99998888764 445556677542      2355566789999987652     


Q ss_pred             --c-hhhhhhhcCCCcEEEee
Q 020320          223 --C-KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       223 --~-~~~~~~l~~~g~~v~~g  240 (327)
                        + ...+..|++++.++.++
T Consensus       246 ~li~~~~l~~mk~gailIN~a  266 (365)
T 4hy3_A          246 RFLGAEAFSSMRRGAAFILLS  266 (365)
T ss_dssp             -CCCHHHHHTSCTTCEEEECS
T ss_pred             hhcCHHHHhcCCCCcEEEECc
Confidence              1 45667788998888875

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.15  E-value=0.059  Score=46.99  Aligned_cols=36  Identities=25%  Similarity=0.398  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      -.++++||+||++++|.+++..+... |++++++.++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~-G~~Vv~~~r~   60 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIG   60 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCc
Confidence            46789999999999999988877777 9999988765

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.14  E-value=0.038  Score=48.70  Aligned_cols=75  Identities=23%  Similarity=0.267  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHH-HHcC---CCEEE-eCCC-CChhhhccCccEEEeC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFV-KELG---ADKVI-DYRK-TKYEDIEEKFDVLYDT  219 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~-~~~g---~~~v~-~~~~-~~~~~~~~~~d~v~d~  219 (327)
                      -.+++|||+||+|.+|..++..+....|. +++++.+++.+...+ +++.   ...+. |-.+ ..+.....++|+||.+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~   98 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA   98 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence            45789999999999999988776655355 788888887765544 3332   22111 2221 1223345689999999


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      ++
T Consensus        99 Aa  100 (344)
T 2gn4_A           99 AA  100 (344)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.13  E-value=0.022  Score=49.54  Aligned_cols=115  Identities=13%  Similarity=0.136  Sum_probs=70.7

Q ss_pred             cccchHHHHHHHHHHh---------cC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHHcCCC
Q 020320          128 ASLPLAVQTAIEGFKT---------AG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKELGAD  196 (327)
Q Consensus       128 a~~~~~~~ta~~~l~~---------~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~~g~~  196 (327)
                      .++|++...+...++.         .+ --.|.+++|+|++..+|..++.++... |+++.+..++..+. +.+++++..
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~~~~l~~ra~~la~~  224 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-GATVYSVDVNNIQKFTRGESLKLN  224 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSSEEEEEESCCCSSCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCchHHHHhHHHHHhhh
Confidence            3456555555555555         23 347899999995446799999999988 88877776653322 222223321


Q ss_pred             -EEEe----CCCCChhhhccCccEEEeCCCCchh--hhhhhcCCCcEEEeeCCC
Q 020320          197 -KVID----YRKTKYEDIEEKFDVLYDTIGDCKN--SFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       197 -~v~~----~~~~~~~~~~~~~d~v~d~~g~~~~--~~~~l~~~g~~v~~g~~~  243 (327)
                       +...    .+..+..+..+.+|++|.++|..+.  .-..++++..++.++.+.
T Consensus       225 ~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~e~vk~GavVIDVgi~r  278 (320)
T 1edz_A          225 KHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIKEGAVCINFACTK  278 (320)
T ss_dssp             CCEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTTSCTTEEEEECSSSC
T ss_pred             cccccccccccHhHHHHHhccCCEEEECCCCCcceeCHHHcCCCeEEEEcCCCc
Confidence             1110    1112345556789999999997633  224568887888887754

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.12  E-value=0.068  Score=46.06  Aligned_cols=42  Identities=19%  Similarity=0.400  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~   66 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEET   66 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988888877 99999998887765433

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.12  E-value=0.04  Score=47.78  Aligned_cols=72  Identities=25%  Similarity=0.403  Sum_probs=50.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cHHHH---HHcCCCEEE-eCCC-CChhhhccCccEEEeCCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFV---KELGADKVI-DYRK-TKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~~~~---~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g~  222 (327)
                      ++|+|+||+|.+|..++..+... |.+++++++++. +...+   ...+...+. |..+ +.+....+++|.||.+++.
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~   89 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKL-GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF   89 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             CeEEEECCCchHHHHHHHHHHHC-CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence            47999999999999999888887 889998888764 44433   234554332 2222 2233455789999999873

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.09  E-value=0.024  Score=46.44  Aligned_cols=71  Identities=14%  Similarity=0.190  Sum_probs=47.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g~  222 (327)
                      .+|||+||+|.+|..++..+... |.+++++++++++...+. -+...+. |..+ ..+.....++|+||.++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNR-GFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence            58999999999999999988888 899999988876543211 1111111 1111 1233345789999999874

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.08  E-value=0.074  Score=44.24  Aligned_cols=72  Identities=11%  Similarity=0.152  Sum_probs=45.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC------C---ChhhhccCccEEEe
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK------T---KYEDIEEKFDVLYD  218 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~------~---~~~~~~~~~d~v~d  218 (327)
                      .++++||+||+|++|.+.++.+..  |.+++++.+++++.+.+.+...-..+..+-      .   .......++|++++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR--DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            468999999999999998877753  778888888887776665533211121110      0   01111247999999


Q ss_pred             CCC
Q 020320          219 TIG  221 (327)
Q Consensus       219 ~~g  221 (327)
                      ++|
T Consensus        82 ~Ag   84 (245)
T 3e9n_A           82 AAA   84 (245)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            987

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.07  E-value=0.067  Score=45.81  Aligned_cols=73  Identities=22%  Similarity=0.292  Sum_probs=49.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHH-HHHHcCC----CEEEeCCCCChhhhccCccEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVE-FVKELGA----DKVIDYRKTKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~-~~~~~g~----~~v~~~~~~~~~~~~~~~d~v~d~~  220 (327)
                      -.+++++|+| +|++|.+++..+... |+ +++++.++.++.+ ++++++.    ..+.....++..+.+..+|++++++
T Consensus       125 l~~k~vlVlG-aGG~g~aia~~L~~~-G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT  202 (283)
T 3jyo_A          125 AKLDSVVQVG-AGGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT  202 (283)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence            4678999999 699999998888888 88 4666678877654 3344431    1122222234445556899999998


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      .
T Consensus       203 p  203 (283)
T 3jyo_A          203 P  203 (283)
T ss_dssp             S
T ss_pred             C
Confidence            5

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.06  E-value=0.031  Score=48.24  Aligned_cols=72  Identities=22%  Similarity=0.389  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-----ccHHHHHH---cCCCEEE-eCCC-CChhhhccCccEEEe
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-----PKVEFVKE---LGADKVI-DYRK-TKYEDIEEKFDVLYD  218 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-----~~~~~~~~---~g~~~v~-~~~~-~~~~~~~~~~d~v~d  218 (327)
                      ..+|+|+||+|.+|..++..+... |.++++.+++.     ++.+.+++   .+...+. |..+ +.+.....++|.||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   82 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   82 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC-CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEE
Confidence            467999999999999999888877 88898888763     33333332   2433221 2221 223344578999999


Q ss_pred             CCC
Q 020320          219 TIG  221 (327)
Q Consensus       219 ~~g  221 (327)
                      +++
T Consensus        83 ~a~   85 (313)
T 1qyd_A           83 ALA   85 (313)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.06  E-value=0.071  Score=43.76  Aligned_cols=94  Identities=13%  Similarity=0.080  Sum_probs=61.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcC-------CcEEEEeCCcccHHHHHH----cC-----CCE--EEeCCCCCh
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-------ASHVVATTSTPKVEFVKE----LG-----ADK--VIDYRKTKY  206 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-------~~~v~~~~~~~~~~~~~~----~g-----~~~--v~~~~~~~~  206 (327)
                      .++++++||-+| ||. |..+..+++.. +       .+++.++.+++..+.+++    .+     .+.  ++..+....
T Consensus        81 ~~~~~~~VLdiG-~G~-G~~~~~la~~~-~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~  157 (227)
T 1r18_A           81 HLKPGARILDVG-SGS-GYLTACFYRYI-KAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG  157 (227)
T ss_dssp             TCCTTCEEEEES-CTT-SHHHHHHHHHH-HHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC
T ss_pred             hCCCCCEEEEEC-CCc-cHHHHHHHHhc-ccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC
Confidence            578999999999 776 88888888876 4       478888888887766643    22     111  222211111


Q ss_pred             hhhccCccEEEeCCC---CchhhhhhhcCCCcEEEeeC
Q 020320          207 EDIEEKFDVLYDTIG---DCKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       207 ~~~~~~~d~v~d~~g---~~~~~~~~l~~~g~~v~~g~  241 (327)
                      ......+|+++....   -.....+.|+++|+++..-.
T Consensus       158 ~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~  195 (227)
T 1r18_A          158 YPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG  195 (227)
T ss_dssp             CGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEe
Confidence            111246899986654   23677889999999887643

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=95.05  E-value=0.096  Score=44.32  Aligned_cols=74  Identities=18%  Similarity=0.263  Sum_probs=46.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHH----HHcCCCEE-EeCCCCChhh---h-------c
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFV----KELGADKV-IDYRKTKYED---I-------E  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~----~~~g~~~v-~~~~~~~~~~---~-------~  210 (327)
                      ..++++||+||++++|.+++..+... |+++++..+ ++++.+.+    +..+.... +..+-.+..+   .       .
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASD-GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHH-TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999988877777 999988754 44443332    33443322 2111122211   1       1


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus       104 g~iD~lvnnAG  114 (267)
T 3u5t_A          104 GGVDVLVNNAG  114 (267)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.05  E-value=0.066  Score=44.92  Aligned_cols=39  Identities=15%  Similarity=0.335  Sum_probs=33.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV  187 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~  187 (327)
                      .+++++|+||+|++|.+++..+... |.++++..+++++.
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~   58 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADA-GDKVAITYRSGEPP   58 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHhh
Confidence            4689999999999999988888777 99999888876553

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.05  E-value=0.067  Score=46.83  Aligned_cols=42  Identities=14%  Similarity=0.147  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~  190 (327)
                      .++++||+||+|++|.+++..+... |++++++. +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~-G~~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHH
Confidence            5689999999999999998888877 99999998 887665443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.05  E-value=0.078  Score=46.34  Aligned_cols=35  Identities=20%  Similarity=0.333  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .++++||+||+|++|.+++..+... |.+++++.++
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~-G~~V~~~~r~   38 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGA-GHRVYASMRD   38 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEecCc
Confidence            3678999999999999998888887 9999988764

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.05  E-value=0.11  Score=45.54  Aligned_cols=73  Identities=16%  Similarity=0.113  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-HHH---HHHc-------CCCEEEeCCCCC---hhhhccCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEF---VKEL-------GADKVIDYRKTK---YEDIEEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-~~~---~~~~-------g~~~v~~~~~~~---~~~~~~~~  213 (327)
                      .+.+|||+||+|.+|..++..+... |.++++++++... ...   +...       +.. ++..+-.+   +.....++
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKL-NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFC-FIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEE-EEECCTTCHHHHHHHTTTC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCCCchhhhhhhhhccccccCCceE-EEEccCCCHHHHHHHhcCC
Confidence            3579999999999999999888877 8999998875442 222   2222       222 22222222   33345689


Q ss_pred             cEEEeCCCC
Q 020320          214 DVLYDTIGD  222 (327)
Q Consensus       214 d~v~d~~g~  222 (327)
                      |+||.+++.
T Consensus       102 d~Vih~A~~  110 (351)
T 3ruf_A          102 DHVLHQAAL  110 (351)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999873

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.04  E-value=0.081  Score=44.87  Aligned_cols=73  Identities=21%  Similarity=0.305  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCE-EEeCCCCChh---hhc-------cC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADK-VIDYRKTKYE---DIE-------EK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~---~~~-------~~  212 (327)
                      .++++||+||+|.+|.+.+..+... |.+++++.+++++.+.+.    +.+... .+..+-.+..   ...       ..
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQA-GADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHH-TCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999988888777 999999888776554332    234332 2221212211   111       35


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus       112 id~li~~Ag  120 (279)
T 3ctm_A          112 IDVFVANAG  120 (279)
T ss_dssp             CSEEEECGG
T ss_pred             CCEEEECCc
Confidence            899999876

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.04  E-value=0.077  Score=44.03  Aligned_cols=73  Identities=22%  Similarity=0.387  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccHHHH----HHcCCCEE-EeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFV----KELGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||+|.+|.+++..+... |.+++++ .+++++.+.+    ++.+.... +..+-.+...   .       ..
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~-G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNM-GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999988888877 8988888 4555544332    22343322 2222222211   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        83 ~~d~vi~~Ag   92 (247)
T 2hq1_A           83 RIDILVNNAG   92 (247)
T ss_dssp             CCCEEEECC-
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.04  E-value=0.039  Score=47.85  Aligned_cols=73  Identities=15%  Similarity=0.347  Sum_probs=49.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc------ccHHHHH---HcCCCEEE-eCCC-CChhhhccCccEEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST------PKVEFVK---ELGADKVI-DYRK-TKYEDIEEKFDVLY  217 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~------~~~~~~~---~~g~~~v~-~~~~-~~~~~~~~~~d~v~  217 (327)
                      ..+|+|+||+|.+|..++..+... |.+++++++++      ++.+.++   ..+...+. |..+ +.+....+++|.||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSF-SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhC-CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            457999999999999998888877 88999888875      2333322   33444332 2222 22334557899999


Q ss_pred             eCCCC
Q 020320          218 DTIGD  222 (327)
Q Consensus       218 d~~g~  222 (327)
                      .+++.
T Consensus        83 ~~a~~   87 (321)
T 3c1o_A           83 SALPF   87 (321)
T ss_dssp             ECCCG
T ss_pred             ECCCc
Confidence            99873

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=95.04  E-value=0.095  Score=42.90  Aligned_cols=93  Identities=17%  Similarity=0.133  Sum_probs=62.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcC------CcEEEEeCCcccHHHHHH----cC-----CCE--EEeCCCCChh
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYG------ASHVVATTSTPKVEFVKE----LG-----ADK--VIDYRKTKYE  207 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g------~~~v~~~~~~~~~~~~~~----~g-----~~~--v~~~~~~~~~  207 (327)
                      .++++++||-+| ||. |..+..+++.. +      .+++.++.+++..+.+++    .+     .+.  ++..+.....
T Consensus        77 ~~~~~~~VLdiG-~G~-G~~~~~la~~~-~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~  153 (227)
T 2pbf_A           77 VLKPGSRAIDVG-SGS-GYLTVCMAIKM-NVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVN  153 (227)
T ss_dssp             TSCTTCEEEEES-CTT-SHHHHHHHHHT-TTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCC
T ss_pred             hCCCCCEEEEEC-CCC-CHHHHHHHHHh-cccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcc
Confidence            678999999999 776 88888888876 4      478888888887776654    23     222  2222111111


Q ss_pred             ----hhccCccEEEeCCC---CchhhhhhhcCCCcEEEee
Q 020320          208 ----DIEEKFDVLYDTIG---DCKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       208 ----~~~~~~d~v~d~~g---~~~~~~~~l~~~g~~v~~g  240 (327)
                          .....+|+++....   -...+.+.|+++|+++..-
T Consensus       154 ~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~  193 (227)
T 2pbf_A          154 EEEKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPI  193 (227)
T ss_dssp             HHHHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred             cccCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence                12346899986654   2367788999999988764

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=95.04  E-value=0.095  Score=44.63  Aligned_cols=96  Identities=18%  Similarity=0.255  Sum_probs=63.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc----CCCEEEeCCCCChhhhccCccEEE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL----GADKVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      ...++.++.+||-+| ||. |..+..+++.. +.+++.++.+++..+.+++.    |...-+.....++.+....+|+|+
T Consensus        58 ~~~~~~~~~~vLDiG-cG~-G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~  134 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVG-CGW-GATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIV  134 (287)
T ss_dssp             TTTTCCTTCEEEEET-CTT-SHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEE
T ss_pred             HHcCCCCcCEEEEEC-Ccc-cHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEE
Confidence            456788999999998 766 77888888777 88899999998888777552    321111111112222225789998


Q ss_pred             eC-----CC--C----chhhhhhhcCCCcEEEee
Q 020320          218 DT-----IG--D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       218 d~-----~g--~----~~~~~~~l~~~g~~v~~g  240 (327)
                      ..     .+  .    ...+.+.|+|+|.++...
T Consensus       135 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          135 SIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             EESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             EeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence            54     22  1    144568899999988764

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=95.02  E-value=0.063  Score=45.57  Aligned_cols=98  Identities=12%  Similarity=0.106  Sum_probs=64.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHHc-----C--CCEEEeCCCCChhhh--
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKEL-----G--ADKVIDYRKTKYEDI--  209 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~~-----g--~~~v~~~~~~~~~~~--  209 (327)
                      .+....+.++++||-.| || .|..+..+++..+ +.+++.++.+++..+.+++.     |  .+.+- ....+....  
T Consensus        91 i~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~-~~~~d~~~~~~  167 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAG-AG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWR-LVVSDLADSEL  167 (280)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEE-EECSCGGGCCC
T ss_pred             HHHHcCCCCCCEEEEEc-cc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEE-EEECchHhcCC
Confidence            44567889999999998 77 7888888888753 45778888888877777542     4  22221 111122211  


Q ss_pred             -ccCccEEEeCCCCc----hhhhhhhcCCCcEEEee
Q 020320          210 -EEKFDVLYDTIGDC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       210 -~~~~d~v~d~~g~~----~~~~~~l~~~g~~v~~g  240 (327)
                       ...+|+++......    ..+.+.|+++|.++...
T Consensus       168 ~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          168 PDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             CTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence             24689998655433    55667899999988764

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.01  E-value=0.087  Score=46.42  Aligned_cols=104  Identities=16%  Similarity=0.204  Sum_probs=72.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..+++...+...  |...+     .++.+.+...|+++-++...    
T Consensus       172 ~gktvGIIG-lG~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~~~--g~~~~-----~~l~ell~~sDvV~l~~Plt~~T~  242 (345)
T 4g2n_A          172 TGRRLGIFG-MGRIGRAIATRARGF-GLAIHYHNRTRLSHALEE--GAIYH-----DTLDSLLGASDIFLIAAPGRPELK  242 (345)
T ss_dssp             TTCEEEEES-CSHHHHHHHHHHHTT-TCEEEEECSSCCCHHHHT--TCEEC-----SSHHHHHHTCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEE-eChhHHHHHHHHHHC-CCEEEEECCCCcchhhhc--CCeEe-----CCHHHHHhhCCEEEEecCCCHHHH
Confidence            378999999 999999999999988 999999888765544332  43321     24556667899999887621    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..|+++..++.++-...          .+   -+.+.+.+++|++.
T Consensus       243 ~li~~~~l~~mk~gailIN~aRG~~----------vd---e~aL~~aL~~g~i~  283 (345)
T 4g2n_A          243 GFLDHDRIAKIPEGAVVINISRGDL----------IN---DDALIEALRSKHLF  283 (345)
T ss_dssp             TCBCHHHHHHSCTTEEEEECSCGGG----------BC---HHHHHHHHHHTSEE
T ss_pred             HHhCHHHHhhCCCCcEEEECCCCch----------hC---HHHHHHHHHhCCce
Confidence                345677888888888753221          12   23456677778775

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.01  E-value=0.05  Score=46.03  Aligned_cols=73  Identities=19%  Similarity=0.334  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHhhcCCcEEEEeCCccc--HHHHHHcCCCE-EE--eCCCCC-hhhh-------cc-
Q 020320          148 TGQTIFIVGG--AGGVGTLVIQLAKHFYGASHVVATTSTPK--VEFVKELGADK-VI--DYRKTK-YEDI-------EE-  211 (327)
Q Consensus       148 ~~~~vlI~ga--~g~~G~~a~~la~~~~g~~~v~~~~~~~~--~~~~~~~g~~~-v~--~~~~~~-~~~~-------~~-  211 (327)
                      .+++++|+|+  +|++|.++++.+... |++++++.+++++  .+..++++... .+  |-.+.+ ....       .. 
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999998  899999988888877 9999988887654  23334454221 12  222211 1111       13 


Q ss_pred             --CccEEEeCCC
Q 020320          212 --KFDVLYDTIG  221 (327)
Q Consensus       212 --~~d~v~d~~g  221 (327)
                        ++|++++++|
T Consensus        85 ~~~iD~lv~nAg   96 (269)
T 2h7i_A           85 GNKLDGVVHSIG   96 (269)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCceEEEECCc
Confidence              7999999887

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=95.01  E-value=0.05  Score=47.56  Aligned_cols=73  Identities=14%  Similarity=0.218  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH---HcC-----CCEEE-eCC-CCChhhhccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK---ELG-----ADKVI-DYR-KTKYEDIEEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~---~~g-----~~~v~-~~~-~~~~~~~~~~~d~v~  217 (327)
                      .+++|||+||+|.+|..++..+... |.++++++++.+....+.   ++.     ...+. |-. ...+.....++|.||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   82 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLER-GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVF   82 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            4678999999999999988887777 888888888766432222   221     11111 222 233444567899999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .+++
T Consensus        83 h~A~   86 (337)
T 2c29_D           83 HVAT   86 (337)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            8875

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=94.96  E-value=0.14  Score=42.94  Aligned_cols=73  Identities=19%  Similarity=0.216  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHH----HHcCCCE-EEeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFV----KELGADK-VIDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~----~~~g~~~-v~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||++++|.+++..+... |++++++. +++++.+..    ++.+... .+..+-.+..+   .       ..
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQE-GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999988888877 99998885 444433322    2334322 22222222211   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        86 ~id~lv~nAg   95 (259)
T 3edm_A           86 EIHGLVHVAG   95 (259)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999886

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=94.94  E-value=0.064  Score=44.96  Aligned_cols=73  Identities=16%  Similarity=0.238  Sum_probs=46.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh---h-------ccCccE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~---~-------~~~~d~  215 (327)
                      ++++||+||++++|.+++..+...+ +..++...+++++.+.+ ++++.... +..+-.+...   .       ..++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            5789999999999999887666552 36777777887766544 44543222 2111122211   1       147999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        82 lvnnAg   87 (254)
T 3kzv_A           82 LVANAG   87 (254)
T ss_dssp             EEEECC
T ss_pred             EEECCc
Confidence            999887

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=94.94  E-value=0.15  Score=45.71  Aligned_cols=78  Identities=15%  Similarity=0.157  Sum_probs=50.0

Q ss_pred             cCC-CCCCEEEEEcCCchHHHHHHHHHHh-hcCCcEEEEeCCccc----------------HHHHHHcCCCEE-EeCCCC
Q 020320          144 AGF-KTGQTIFIVGGAGGVGTLVIQLAKH-FYGASHVVATTSTPK----------------VEFVKELGADKV-IDYRKT  204 (327)
Q Consensus       144 ~~~-~~~~~vlI~ga~g~~G~~a~~la~~-~~g~~~v~~~~~~~~----------------~~~~~~~g~~~v-~~~~~~  204 (327)
                      ... ..++++||+||++++|++++..+.. . |++++++.++.+.                .+.+++.|.... +..+-.
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~-GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGC-GADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHH-CCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhc-CCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            344 5678889999999999998777776 7 9999888754332                123345564432 222222


Q ss_pred             Chhh----------hccCccEEEeCCCC
Q 020320          205 KYED----------IEEKFDVLYDTIGD  222 (327)
Q Consensus       205 ~~~~----------~~~~~d~v~d~~g~  222 (327)
                      +...          ...++|++++++|.
T Consensus       120 d~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            2211          12479999999875

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=94.93  E-value=0.069  Score=46.57  Aligned_cols=73  Identities=23%  Similarity=0.395  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---------CcccHHHH----HHcCCCEEEeCCCCC-hhh-----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---------STPKVEFV----KELGADKVIDYRKTK-YED-----  208 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---------~~~~~~~~----~~~g~~~v~~~~~~~-~~~-----  208 (327)
                      .++++||+||+|++|.+++..+... |+++++.++         +.++.+.+    +..+...+.|..+.. ...     
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~-Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAER-GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            5789999999999999988888877 998888643         33433222    233433344443322 111     


Q ss_pred             --hccCccEEEeCCC
Q 020320          209 --IEEKFDVLYDTIG  221 (327)
Q Consensus       209 --~~~~~d~v~d~~g  221 (327)
                        ...++|++++++|
T Consensus        87 ~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHTSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence              1247999999987

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=94.93  E-value=0.081  Score=44.33  Aligned_cols=73  Identities=22%  Similarity=0.317  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHH-H---HcCCCE-EEeCCCCChhh---hc-------c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFV-K---ELGADK-VIDYRKTKYED---IE-------E  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~-~---~~g~~~-v~~~~~~~~~~---~~-------~  211 (327)
                      .++++||+||+|.+|.+++..+... |.+++++.+ ++++.+.+ +   +.+... .+..+-.+...   ..       .
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999988888777 999998888 65544332 2   234322 12222222211   11       3


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        85 ~id~li~~Ag   94 (261)
T 1gee_A           85 KLDVMINNAG   94 (261)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=94.93  E-value=0.076  Score=45.11  Aligned_cols=71  Identities=20%  Similarity=0.252  Sum_probs=47.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCC--CE-EEeCCCCChhh---h-------ccCccE
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGA--DK-VIDYRKTKYED---I-------EEKFDV  215 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~--~~-v~~~~~~~~~~---~-------~~~~d~  215 (327)
                      +++||+||+|++|.+++..+... |++++++.+++++.+.+ +++..  .. .+..+-.+..+   .       ..++|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEA-GWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            78999999999999988888877 99999998887765544 33432  11 12111122111   1       136899


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus       101 lvnnAG  106 (272)
T 2nwq_A          101 LINNAG  106 (272)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=94.92  E-value=0.12  Score=43.90  Aligned_cols=74  Identities=16%  Similarity=0.236  Sum_probs=47.6

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCc--ccHHHH-HHcCCCEEEeCCCCChhh---h-------cc
Q 020320          147 KTGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTST--PKVEFV-KELGADKVIDYRKTKYED---I-------EE  211 (327)
Q Consensus       147 ~~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~--~~~~~~-~~~g~~~v~~~~~~~~~~---~-------~~  211 (327)
                      -.++++||+||+  +++|.+.+..+... |++++++.+++  +..+.+ ++.+.-..+..+-.+...   .       ..
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHRE-GAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHT-TCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHc-CCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            457899999988  55999988877777 99998888876  333333 233322233222222211   1       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       103 ~id~li~nAg  112 (280)
T 3nrc_A          103 GLDAIVHSIA  112 (280)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            6899999987

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=94.91  E-value=0.048  Score=45.76  Aligned_cols=73  Identities=14%  Similarity=0.192  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCEE-EeCCCCChhh---hc------cCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADKV-IDYRKTKYED---IE------EKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~v-~~~~~~~~~~---~~------~~~  213 (327)
                      .++++||+||++++|.+.++.+... |++++++.+++++.+.+ ++   .+.... +..+-.+..+   ..      .++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i   84 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAE-GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence            5789999999999999988888877 99999999887765443 22   343221 2111122111   11      478


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus        85 d~lv~nAg   92 (252)
T 3h7a_A           85 EVTIFNVG   92 (252)
T ss_dssp             EEEEECCC
T ss_pred             eEEEECCC
Confidence            99999988

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=94.87  E-value=0.095  Score=45.59  Aligned_cols=85  Identities=15%  Similarity=0.098  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHHHcCCC-EEEeCCCCChhh-hccCccEEEeCCCCc-
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVKELGAD-KVIDYRKTKYED-IEEKFDVLYDTIGDC-  223 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~-~~~~~d~v~d~~g~~-  223 (327)
                      ..+|.|+| +|.+|.+.+..++.. |.  ++++.++++++.+.+.+.|.. ....    +..+ ...++|+||-++... 
T Consensus        33 ~~kI~IIG-~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~----~~~~~~~~~aDvVilavp~~~  106 (314)
T 3ggo_A           33 MQNVLIVG-VGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDLGIIDEGTT----SIAKVEDFSPDFVMLSSPVRT  106 (314)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHTTSCSEEES----CTTGGGGGCCSEEEECSCGGG
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHCCCcchhcC----CHHHHhhccCCEEEEeCCHHH
Confidence            36899999 999999988888877 77  788888898888888888853 2221    2233 456788888887632 


Q ss_pred             -----hhhhhhhcCCCcEEEe
Q 020320          224 -----KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 -----~~~~~~l~~~g~~v~~  239 (327)
                           ......++++..++.+
T Consensus       107 ~~~vl~~l~~~l~~~~iv~d~  127 (314)
T 3ggo_A          107 FREIAKKLSYILSEDATVTDQ  127 (314)
T ss_dssp             HHHHHHHHHHHSCTTCEEEEC
T ss_pred             HHHHHHHHhhccCCCcEEEEC
Confidence                 2223345555555544

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=94.87  E-value=0.12  Score=43.23  Aligned_cols=36  Identities=17%  Similarity=0.237  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTST  184 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~  184 (327)
                      .+++++|+||+|++|.+++..+... |.+ ++++.+++
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~-G~~~v~~~~r~~   40 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKR-NLKNFVILDRVE   40 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-CCSEEEEEESSC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCcEEEEEecCc
Confidence            4689999999999999988888877 886 77777765

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=94.85  E-value=0.11  Score=47.04  Aligned_cols=79  Identities=15%  Similarity=0.178  Sum_probs=51.5

Q ss_pred             hcCC-CCCCEEEEEcCCchHHHHHHHHHHh-hcCCcEEEEeCCcccH----------------HHHHHcCCCEE-EeCCC
Q 020320          143 TAGF-KTGQTIFIVGGAGGVGTLVIQLAKH-FYGASHVVATTSTPKV----------------EFVKELGADKV-IDYRK  203 (327)
Q Consensus       143 ~~~~-~~~~~vlI~ga~g~~G~~a~~la~~-~~g~~~v~~~~~~~~~----------------~~~~~~g~~~v-~~~~~  203 (327)
                      ...+ +.++++||+||++++|++++..+.. . |++++++.++.+..                +.+++.|.... +..+-
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~-GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGF-GADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHH-CCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhC-CCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            3455 4688999999999999998777776 7 99999887654321                34455665432 22222


Q ss_pred             CChh----------hhc-cCccEEEeCCCC
Q 020320          204 TKYE----------DIE-EKFDVLYDTIGD  222 (327)
Q Consensus       204 ~~~~----------~~~-~~~d~v~d~~g~  222 (327)
                      .+..          +.. +++|++++++|.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            2211          123 568999998874

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=94.81  E-value=0.13  Score=43.17  Aligned_cols=89  Identities=15%  Similarity=0.175  Sum_probs=59.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhh--ccCccEEEeC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDI--EEKFDVLYDT  219 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~--~~~~d~v~d~  219 (327)
                      +.++++||-+| ||. |..++.+++ . |.+++.++.++...+.+++    .+.+  +.....+....  ...+|+++..
T Consensus       118 ~~~~~~VLDiG-cG~-G~l~~~la~-~-g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~~~~fD~Vv~n  191 (254)
T 2nxc_A          118 LRPGDKVLDLG-TGS-GVLAIAAEK-L-GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALPFGPFDLLVAN  191 (254)
T ss_dssp             CCTTCEEEEET-CTT-SHHHHHHHH-T-TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGGGCCEEEEEEE
T ss_pred             cCCCCEEEEec-CCC-cHHHHHHHH-h-CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCcCCCCCEEEEC
Confidence            57889999999 777 877777777 4 6688888889888777754    3433  11111222221  2468999854


Q ss_pred             CC--C----chhhhhhhcCCCcEEEee
Q 020320          220 IG--D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       220 ~g--~----~~~~~~~l~~~g~~v~~g  240 (327)
                      .-  .    ...+.+.|+++|.++..+
T Consensus       192 ~~~~~~~~~l~~~~~~LkpgG~lils~  218 (254)
T 2nxc_A          192 LYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             CCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CcHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            32  1    145667899999988765

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=94.79  E-value=0.091  Score=43.51  Aligned_cols=72  Identities=19%  Similarity=0.297  Sum_probs=46.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCC-------cEEEEeCCcccHHHH-HHc---CCCE-EEeCCCCChhh---h----
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGA-------SHVVATTSTPKVEFV-KEL---GADK-VIDYRKTKYED---I----  209 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~-------~~v~~~~~~~~~~~~-~~~---g~~~-v~~~~~~~~~~---~----  209 (327)
                      ++++||+||+|.+|.+.+..+... |.       ++++..+++++.+.+ +++   +... .+..+-.+...   .    
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~-G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHh-cCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            568999999999999988877777 87       788888877665443 222   3221 12212122211   1    


Q ss_pred             ---ccCccEEEeCCC
Q 020320          210 ---EEKFDVLYDTIG  221 (327)
Q Consensus       210 ---~~~~d~v~d~~g  221 (327)
                         ..++|++++++|
T Consensus        81 ~~~~g~id~li~~Ag   95 (244)
T 2bd0_A           81 VERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHHTSCCSEEEECCC
T ss_pred             HHhCCCCCEEEEcCC
Confidence               137999999987

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=94.75  E-value=0.037  Score=46.82  Aligned_cols=69  Identities=14%  Similarity=0.150  Sum_probs=47.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      +++|||+||+|.+|..++..+... |.++++..+++.+..   ..+...+. |-.+ ..+.....++|+++++.|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPM-AEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGG-EEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhc-CCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence            468999999999999998888877 888888888765543   11121111 2111 122334468999999987

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=94.72  E-value=0.061  Score=47.59  Aligned_cols=71  Identities=17%  Similarity=0.212  Sum_probs=48.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH--HHHHHc-CCCEEEeCC-CC---ChhhhccCccEEEeCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV--EFVKEL-GADKVIDYR-KT---KYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~--~~~~~~-g~~~v~~~~-~~---~~~~~~~~~d~v~d~~g  221 (327)
                      +.+|+|+||+|.+|..++..+... |.++++.++++++.  ..+.+. +.. ++..+ -.   .+....+++|.+|.+.+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~l~~~~~v~-~v~~D~l~d~~~l~~~~~~~d~Vi~~a~   82 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGLIAEELQAIPNVT-LFQGPLLNNVPLMDTLFEGAHLAFINTT   82 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSHHHHHHHTSTTEE-EEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCCChhhHHHHhhcCCcE-EEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence            568999999999999998888777 88999988877764  222222 222 22222 11   23334578999997765

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=94.65  E-value=0.057  Score=45.53  Aligned_cols=38  Identities=16%  Similarity=0.283  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      .++++||+||+|++|.+.+..+... |++++++.++.++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~   64 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDR-NYRVVATSRSIKP   64 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhh
Confidence            5689999999999999988888777 9999999887654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=94.65  E-value=0.14  Score=42.59  Aligned_cols=73  Identities=23%  Similarity=0.337  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHH----HHcCCCEE-EeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFV----KELGADKV-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~----~~~g~~~v-~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||+|++|.+++..+... |+++++..+ ++++.+.+    ++.+.+.. +..+-.+..+   .       ..
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEE-GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4688999999999999988888777 999988876 43443332    33444332 2222222211   1       14


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        82 ~id~lv~nAg   91 (246)
T 3osu_A           82 SLDVLVNNAG   91 (246)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=94.64  E-value=0.19  Score=42.63  Aligned_cols=85  Identities=18%  Similarity=0.160  Sum_probs=57.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhcc-CccEEEeCCCCc---
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE-KFDVLYDTIGDC---  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~d~v~d~~g~~---  223 (327)
                      .+|.|+| +|.+|.+.+..++.. |.  ++++..+++++.+.+++.|......   .+..+... ++|+++.++...   
T Consensus         2 ~~I~iIG-~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~aDvVilavp~~~~~   76 (281)
T 2g5c_A            2 QNVLIVG-VGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDLGIIDEGT---TSIAKVEDFSPDFVMLSSPVRTFR   76 (281)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHTTSCSEEE---SCGGGGGGTCCSEEEECSCHHHHH
T ss_pred             cEEEEEe-cCHHHHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHCCCccccc---CCHHHHhcCCCCEEEEcCCHHHHH
Confidence            3689999 899999988888877 76  7777778888888888888642111   12334456 789999888732   


Q ss_pred             ---hhhhhhhcCCCcEEEe
Q 020320          224 ---KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 ---~~~~~~l~~~g~~v~~  239 (327)
                         ......++++..++..
T Consensus        77 ~v~~~l~~~l~~~~iv~~~   95 (281)
T 2g5c_A           77 EIAKKLSYILSEDATVTDQ   95 (281)
T ss_dssp             HHHHHHHHHSCTTCEEEEC
T ss_pred             HHHHHHHhhCCCCcEEEEC
Confidence               2222345555555443

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=94.64  E-value=0.04  Score=47.43  Aligned_cols=73  Identities=19%  Similarity=0.379  Sum_probs=48.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc------cHHHHH---HcCCCEEE-eCCC-CChhhhccCccEEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP------KVEFVK---ELGADKVI-DYRK-TKYEDIEEKFDVLY  217 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~------~~~~~~---~~g~~~v~-~~~~-~~~~~~~~~~d~v~  217 (327)
                      ..+|+|+||+|.+|...+..+... |.++++.+++..      +.+.++   ..+...+. |..+ ..+.....++|.||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   82 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   82 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC-CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEE
Confidence            467999999999999998888877 888888887632      332222   23443321 2221 12333456899999


Q ss_pred             eCCCC
Q 020320          218 DTIGD  222 (327)
Q Consensus       218 d~~g~  222 (327)
                      .+++.
T Consensus        83 ~~a~~   87 (308)
T 1qyc_A           83 STVGS   87 (308)
T ss_dssp             ECCCG
T ss_pred             ECCcc
Confidence            99873

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.63  E-value=0.11  Score=45.60  Aligned_cols=73  Identities=21%  Similarity=0.305  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc----ccHHHHH---HcCCCEEE-eCCC-CChhhhcc--CccEEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST----PKVEFVK---ELGADKVI-DYRK-TKYEDIEE--KFDVLY  217 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~----~~~~~~~---~~g~~~v~-~~~~-~~~~~~~~--~~d~v~  217 (327)
                      ..+|||+||+|.+|..++..+... |.++++.++++    ++...++   ..+...+. |..+ ..+.....  ++|+||
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   88 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDA-HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV   88 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHT-TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHC-CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence            468999999999999999888887 88999998866    3443332   33444332 2221 22333445  899999


Q ss_pred             eCCCC
Q 020320          218 DTIGD  222 (327)
Q Consensus       218 d~~g~  222 (327)
                      .+++.
T Consensus        89 ~~a~~   93 (346)
T 3i6i_A           89 STVGG   93 (346)
T ss_dssp             ECCCG
T ss_pred             ECCch
Confidence            99884

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=94.61  E-value=0.11  Score=45.53  Aligned_cols=83  Identities=19%  Similarity=0.244  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|.+|.|+| .|.+|...++.++.. |.++++.++++++ +.+.++|...      .++.+.+...|+++.++...    
T Consensus       145 ~g~~vgIIG-~G~iG~~vA~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~------~~l~e~l~~aDiVil~vp~~~~t~  215 (333)
T 2d0i_A          145 YGKKVGILG-MGAIGKAIARRLIPF-GVKLYYWSRHRKV-NVEKELKARY------MDIDELLEKSDIVILALPLTRDTY  215 (333)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-TCEEEEECSSCCH-HHHHHHTEEE------CCHHHHHHHCSEEEECCCCCTTTT
T ss_pred             CcCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEECCCcch-hhhhhcCcee------cCHHHHHhhCCEEEEcCCCChHHH
Confidence            578999999 999999999999988 9998888887765 5555666421      13444556789999887632    


Q ss_pred             ---h-hhhhhhcCCCcEEEee
Q 020320          224 ---K-NSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ---~-~~~~~l~~~g~~v~~g  240 (327)
                         + ..+..++++ .++..+
T Consensus       216 ~~i~~~~~~~mk~g-ilin~s  235 (333)
T 2d0i_A          216 HIINEERVKKLEGK-YLVNIG  235 (333)
T ss_dssp             TSBCHHHHHHTBTC-EEEECS
T ss_pred             HHhCHHHHhhCCCC-EEEECC
Confidence               2 345667777 666554

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=94.61  E-value=0.041  Score=47.43  Aligned_cols=70  Identities=19%  Similarity=0.264  Sum_probs=45.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCChhhhccCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      .+|||+||+|.+|...+..+... |.+++++++++++.......+...+. |-.+..+.....+ |++|++++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~   71 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVEL-GYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAA   71 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCC
Confidence            36999999999999999888887 89998888765543222122222221 2222223333445 99999987

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=94.60  E-value=0.15  Score=41.69  Aligned_cols=94  Identities=13%  Similarity=0.060  Sum_probs=61.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcC--CcEEEEeCCcccHHHHHH----cC-----CCE--EEeCCCCChhhhcc
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYG--ASHVVATTSTPKVEFVKE----LG-----ADK--VIDYRKTKYEDIEE  211 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g--~~~v~~~~~~~~~~~~~~----~g-----~~~--v~~~~~~~~~~~~~  211 (327)
                      .++++++||-+| ||. |..+..+++.. +  .+++.++.++...+.+++    .+     .+.  ++..+.........
T Consensus        74 ~~~~~~~vLDiG-~G~-G~~~~~la~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~  150 (226)
T 1i1n_A           74 QLHEGAKALDVG-SGS-GILTACFARMV-GCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEA  150 (226)
T ss_dssp             TSCTTCEEEEET-CTT-SHHHHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGC
T ss_pred             hCCCCCEEEEEc-CCc-CHHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCC
Confidence            478999999998 675 87888888876 4  578888888887776643    22     122  12211111111124


Q ss_pred             CccEEEeCCC---CchhhhhhhcCCCcEEEeeC
Q 020320          212 KFDVLYDTIG---DCKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       212 ~~d~v~d~~g---~~~~~~~~l~~~g~~v~~g~  241 (327)
                      .+|+++....   -...+.+.|+++|+++..-.
T Consensus       151 ~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          151 PYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence            6899986543   23677889999999887644

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=94.58  E-value=0.11  Score=48.57  Aligned_cols=64  Identities=23%  Similarity=0.244  Sum_probs=47.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      +.+|||+||+|.+|..++..+... |.+++++++++.+.+       ....+.. +.......++|+||.+++
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~-G~~V~~l~R~~~~~~-------~v~~d~~-~~~~~~l~~~D~Vih~A~  210 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTG-GHEVIQLVRKEPKPG-------KRFWDPL-NPASDLLDGADVLVHLAG  210 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSSCCTT-------CEECCTT-SCCTTTTTTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCCcc-------ceeeccc-chhHHhcCCCCEEEECCC
Confidence            679999999999999999888887 899999998766531       1111211 223344578999999887

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=94.57  E-value=0.1  Score=46.03  Aligned_cols=49  Identities=35%  Similarity=0.480  Sum_probs=40.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCE
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK  197 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~  197 (327)
                      -.|++|.|.| .|.+|+.+++.++.+ |+++++.+.++.+.+++++++++.
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~-GakVvvsD~~~~~~~~a~~~ga~~  221 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEA-GAQLLVADTDTERVAHAVALGHTA  221 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHhcCCEE
Confidence            5799999999 999999999999998 999997777766666677777653

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=94.56  E-value=0.041  Score=46.72  Aligned_cols=71  Identities=18%  Similarity=0.194  Sum_probs=47.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHhh-cCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHF-YGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~-~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      +|+|+||+|.+|...+..+... .|.++++.++++++...+...+...+. |..+ ..+.....++|.+|.+++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence            4899999999999988777653 267888888877765544444544332 2222 223344578999999887

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=94.54  E-value=0.1  Score=43.95  Aligned_cols=73  Identities=29%  Similarity=0.332  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHH----HHcCCCEE-EeCCCCChh---hhc-------c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFV----KELGADKV-IDYRKTKYE---DIE-------E  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~----~~~g~~~v-~~~~~~~~~---~~~-------~  211 (327)
                      .++++||+||+|.+|.+.+..+... |.+++++.+ ++++.+.+    ++.+.... +..+-.+..   ...       .
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRR-GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988888877 899888887 65544332    23354322 222212211   111       3


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        99 ~~d~vi~~Ag  108 (274)
T 1ja9_A           99 GLDFVMSNSG  108 (274)
T ss_dssp             CEEEEECCCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=94.54  E-value=0.12  Score=43.17  Aligned_cols=76  Identities=24%  Similarity=0.371  Sum_probs=46.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHH-H---HHcCCCE-EEeCCCCChhh---h------
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEF-V---KELGADK-VIDYRKTKYED---I------  209 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~-~---~~~g~~~-v~~~~~~~~~~---~------  209 (327)
                      ...+++++||+||+|++|.+++..+... |+++++.. ++.++... +   ++.+... .+..+-.+..+   .      
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKD-GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHT-TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            3457889999999999999988877777 99988887 55444322 2   3344332 22222222211   1      


Q ss_pred             -ccCccEEEeCCC
Q 020320          210 -EEKFDVLYDTIG  221 (327)
Q Consensus       210 -~~~~d~v~d~~g  221 (327)
                       ..++|++++++|
T Consensus        88 ~~g~id~lv~~Ag  100 (256)
T 3ezl_A           88 EVGEIDVLVNNAG  100 (256)
T ss_dssp             HTCCEEEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence             137899999987

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=94.53  E-value=0.077  Score=44.27  Aligned_cols=96  Identities=20%  Similarity=0.176  Sum_probs=64.3

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC-E--EEeCCCCChhhhccCc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD-K--VIDYRKTKYEDIEEKF  213 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~-~--v~~~~~~~~~~~~~~~  213 (327)
                      +....+.++.+||=+| ||. |..+..+++.. +.+++.++.++...+.+++    .|.. .  .+..+-.+... ...+
T Consensus        29 ~~~~~~~~~~~VLDiG-cG~-G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~f  104 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLG-SGS-GEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKC  104 (256)
T ss_dssp             HHHTCCCTTCEEEEET-CTT-CHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCE
T ss_pred             HHhcCCCCCCEEEEEC-CCC-CHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCC
Confidence            4567788999999998 776 88888999887 8889999999887776643    3432 1  12222222111 3468


Q ss_pred             cEEEeCCC-----C----chhhhhhhcCCCcEEEee
Q 020320          214 DVLYDTIG-----D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       214 d~v~d~~g-----~----~~~~~~~l~~~g~~v~~g  240 (327)
                      |+|+....     .    +..+.++|+|+|.++...
T Consensus       105 D~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          105 DVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             EEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            99985221     1    245567899999988764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=94.51  E-value=0.13  Score=42.97  Aligned_cols=38  Identities=26%  Similarity=0.411  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      .++++||+||+|.+|.+++..+... |.+++++.++.++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~   50 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAAD   50 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCcchh
Confidence            4678999999999999988888777 8999988885554

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=94.49  E-value=0.045  Score=48.86  Aligned_cols=73  Identities=15%  Similarity=0.170  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g  221 (327)
                      ...+|||+||+|.+|..++..+... |.+++++++++.+.......+...+. |-.+ ..+.....++|+||.+++
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~  102 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHE-GHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA  102 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHC-CCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence            3578999999999999998888877 88999888765543221112232221 2111 123334568999999987

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=94.49  E-value=0.11  Score=44.01  Aligned_cols=75  Identities=24%  Similarity=0.346  Sum_probs=47.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHH----HHcCCCEE-EeCCCCChhh---h-------
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFV----KELGADKV-IDYRKTKYED---I-------  209 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~----~~~g~~~v-~~~~~~~~~~---~-------  209 (327)
                      ...++++||+||+|++|.+++..+... |+++++.. +++++.+.+    ++.+.... +..+-.+..+   .       
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQ-GWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            356789999999999999988888777 99987774 555544333    23343222 2212122211   1       


Q ss_pred             ccCccEEEeCCC
Q 020320          210 EEKFDVLYDTIG  221 (327)
Q Consensus       210 ~~~~d~v~d~~g  221 (327)
                      ..++|+++.++|
T Consensus       102 ~g~id~li~nAg  113 (272)
T 4e3z_A          102 FGRLDGLVNNAG  113 (272)
T ss_dssp             HSCCCEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            147899999987

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=94.48  E-value=0.15  Score=43.60  Aligned_cols=75  Identities=23%  Similarity=0.373  Sum_probs=49.7

Q ss_pred             HHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHH-HHHHcCC---CEEEeCCCCChhhhccCcc
Q 020320          141 FKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVE-FVKELGA---DKVIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       141 l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~-~~~~~g~---~~v~~~~~~~~~~~~~~~d  214 (327)
                      ++..+. -.+++++|+| +|++|.+++..+... |+ ++.+..+++++.+ ++++++.   -.+...     .+...++|
T Consensus       117 L~~~~~~l~~k~vlvlG-aGg~g~aia~~L~~~-G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~-----~~l~~~aD  189 (281)
T 3o8q_A          117 LLAQQVLLKGATILLIG-AGGAARGVLKPLLDQ-QPASITVTNRTFAKAEQLAELVAAYGEVKAQAF-----EQLKQSYD  189 (281)
T ss_dssp             HHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHTT-CCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEG-----GGCCSCEE
T ss_pred             HHHhCCCccCCEEEEEC-chHHHHHHHHHHHhc-CCCeEEEEECCHHHHHHHHHHhhccCCeeEeeH-----HHhcCCCC
Confidence            443333 3678999999 699999988888877 86 6777778877644 4455542   122222     12225799


Q ss_pred             EEEeCCCC
Q 020320          215 VLYDTIGD  222 (327)
Q Consensus       215 ~v~d~~g~  222 (327)
                      +++++++.
T Consensus       190 iIInaTp~  197 (281)
T 3o8q_A          190 VIINSTSA  197 (281)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCcC
Confidence            99999863

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=94.47  E-value=0.11  Score=42.51  Aligned_cols=98  Identities=14%  Similarity=0.102  Sum_probs=65.4

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC---C-EEEeCCCCChhhhccCccE
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA---D-KVIDYRKTKYEDIEEKFDV  215 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~---~-~v~~~~~~~~~~~~~~~d~  215 (327)
                      .+....+.++++||-+| ||. |..+..+++.  +.+++.++.+++..+.+++...   . .++..+..........+|+
T Consensus        62 ~~~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~  137 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIG-TGI-GYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDR  137 (231)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEE
T ss_pred             HHHhcCCCCCCEEEEEc-CCC-CHHHHHHHHH--cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccE
Confidence            34566788999999999 776 8888888885  5788888899888888765321   1 1222211110112246899


Q ss_pred             EEeCCC--C-chhhhhhhcCCCcEEEeeC
Q 020320          216 LYDTIG--D-CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       216 v~d~~g--~-~~~~~~~l~~~g~~v~~g~  241 (327)
                      |+....  . ...+.+.|+++|+++..-.
T Consensus       138 v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          138 VVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             EEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             EEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            986543  2 2677889999999887743

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=94.47  E-value=0.052  Score=46.13  Aligned_cols=72  Identities=19%  Similarity=0.243  Sum_probs=49.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhh-cCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHF-YGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~-~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g~  222 (327)
                      +|||+||+|.+|...+..+... .|.++++.++++++...+...+...+. |..+ ..+.....++|.+|.+++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   76 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP   76 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence            6899999999999888777654 267888888877766555444544332 2222 2233445789999999873

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=94.45  E-value=0.11  Score=45.75  Aligned_cols=105  Identities=22%  Similarity=0.274  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|.++.|+| .|.+|...++.++.+ |.++++..++.++ ....++|++.+     .++.+.+...|+++-++...    
T Consensus       167 ~g~tvGIIG-~G~IG~~vA~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~~-----~~l~ell~~aDvV~l~~P~t~~t~  238 (347)
T 1mx3_A          167 RGETLGIIG-LGRVGQAVALRAKAF-GFNVLFYDPYLSD-GVERALGLQRV-----STLQDLLFHSDCVTLHCGLNEHNH  238 (347)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECTTSCT-THHHHHTCEEC-----SSHHHHHHHCSEEEECCCCCTTCT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHC-CCEEEEECCCcch-hhHhhcCCeec-----CCHHHHHhcCCEEEEcCCCCHHHH
Confidence            578999999 999999999999988 9998888766544 23455676322     13445566789999877521    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..++++..++.++....          .+   -+.+.+.+++|.+.
T Consensus       239 ~li~~~~l~~mk~gailIN~arg~~----------vd---~~aL~~aL~~g~i~  279 (347)
T 1mx3_A          239 HLINDFTVKQMRQGAFLVNTARGGL----------VD---EKALAQALKEGRIR  279 (347)
T ss_dssp             TSBSHHHHTTSCTTEEEEECSCTTS----------BC---HHHHHHHHHHTSEE
T ss_pred             HHhHHHHHhcCCCCCEEEECCCChH----------Hh---HHHHHHHHHhCCCc
Confidence                345667888888777753321          11   23455666667654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=94.44  E-value=0.053  Score=46.19  Aligned_cols=71  Identities=21%  Similarity=0.308  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh---h------ccCccEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED---I------EEKFDVL  216 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~---~------~~~~d~v  216 (327)
                      .++++||+||++++|.+.++.+... |++++++.+++++.+.+ ++++.... +.-+-.+...   .      ..++|++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHAD-GLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            5789999999999999988888777 99999999887766544 45654322 2211122111   1      1368999


Q ss_pred             EeC
Q 020320          217 YDT  219 (327)
Q Consensus       217 ~d~  219 (327)
                      +.+
T Consensus       108 v~~  110 (281)
T 3ppi_A          108 VVA  110 (281)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            987

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=94.44  E-value=0.062  Score=47.51  Aligned_cols=37  Identities=35%  Similarity=0.324  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHh--hcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKH--FYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~--~~g~~~v~~~~~~~  185 (327)
                      .+.+|||+||+|.+|...+..+..  . |.+++++++++.
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~-g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHP-KAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCT-TSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCC-CCeEEEEECCCc
Confidence            468999999999999998888887  6 899999987554

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=94.42  E-value=0.063  Score=46.78  Aligned_cols=42  Identities=26%  Similarity=0.479  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .++++||+||+|++|.+++..+... |++++++.+++++.+.+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~-G~~Vv~~~r~~~~~~~~   48 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQ-GCKVAIADIRQDSIDKA   48 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999988888777 99999999988765444

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=94.41  E-value=0.056  Score=48.11  Aligned_cols=89  Identities=19%  Similarity=0.344  Sum_probs=60.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC-CChhhhccCccEEEeCCCCc---hh
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK-TKYEDIEEKFDVLYDTIGDC---KN  225 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~d~v~d~~g~~---~~  225 (327)
                      .+|+|+| +|.+|..+++.+..  ...+.+++.+.++.+.+++......+|..+ +.+...+.+.|+|+++++..   .-
T Consensus        17 mkilvlG-aG~vG~~~~~~L~~--~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v   93 (365)
T 3abi_A           17 MKVLILG-AGNIGRAIAWDLKD--EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKS   93 (365)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHHH
T ss_pred             cEEEEEC-CCHHHHHHHHHHhc--CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccchH
Confidence            4799999 59999998888764  456777788888777765543222233322 22333457899999999853   33


Q ss_pred             hhhhhcCCCcEEEeeC
Q 020320          226 SFVVAKDNAPIVDITW  241 (327)
Q Consensus       226 ~~~~l~~~g~~v~~g~  241 (327)
                      +-.|+..+-.++....
T Consensus        94 ~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           94 IKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             HHHHHHHTCEEEECCC
T ss_pred             HHHHHhcCcceEeeec
Confidence            4467777777777653

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=94.41  E-value=0.15  Score=42.16  Aligned_cols=72  Identities=18%  Similarity=0.234  Sum_probs=46.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccHHHH-H---HcCCCE-E-EeCCCCChhh---h-------cc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFV-K---ELGADK-V-IDYRKTKYED---I-------EE  211 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~~~~-~---~~g~~~-v-~~~~~~~~~~---~-------~~  211 (327)
                      +++++|+||+|.+|...++.+... |.+++++ .+++++.+.+ +   +.+... . +..+-.+...   .       ..
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~-G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAED-GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            368999999999999988888877 8988887 5666654433 2   234321 2 2222222211   1       24


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|+++.++|
T Consensus        80 ~~d~li~~Ag   89 (245)
T 2ph3_A           80 GLDTLVNNAG   89 (245)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=94.34  E-value=0.14  Score=44.87  Aligned_cols=103  Identities=22%  Similarity=0.340  Sum_probs=71.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|.++.|+| .|.+|...++.++.+ |.++++..+++++.  +++. ++.+     .+..+.....|+++.++...    
T Consensus       145 ~g~~vgIiG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~--~~~~-~~~~-----~~l~ell~~aDvV~l~~p~~~~t~  214 (333)
T 1j4a_A          145 RDQVVGVVG-TGHIGQVFMQIMEGF-GAKVITYDIFRNPE--LEKK-GYYV-----DSLDDLYKQADVISLHVPDVPANV  214 (333)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCHH--HHHT-TCBC-----SCHHHHHHHCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEECCCcchh--HHhh-Ceec-----CCHHHHHhhCCEEEEcCCCcHHHH
Confidence            478999999 999999999999988 99998888776654  2333 3211     13455567899999988632    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..+++++.++.++....          .+   -+.+.+.+++|++.
T Consensus       215 ~li~~~~l~~mk~ga~lIn~arg~~----------vd---~~aL~~aL~~g~i~  255 (333)
T 1j4a_A          215 HMINDESIAKMKQDVVIVNVSRGPL----------VD---TDAVIRGLDSGKIF  255 (333)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSCGGG----------BC---HHHHHHHHHHTSEE
T ss_pred             HHHhHHHHhhCCCCcEEEECCCCcc----------cC---HHHHHHHHHhCCce
Confidence                235677888888887754221          11   24566677777775

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=94.31  E-value=0.073  Score=50.92  Aligned_cols=73  Identities=25%  Similarity=0.405  Sum_probs=43.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---------CcccHHHH----HHcCCCEEEeCCCCC-hhhh----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---------STPKVEFV----KELGADKVIDYRKTK-YEDI----  209 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---------~~~~~~~~----~~~g~~~v~~~~~~~-~~~~----  209 (327)
                      .|+++||+||++++|.+.+..+... |+++++.++         +.++.+.+    ++.+...+.+..+.. ....    
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~-Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAER-GAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence            5789999999999999988887777 999998765         44443322    334555444433321 1111    


Q ss_pred             ---ccCccEEEeCCC
Q 020320          210 ---EEKFDVLYDTIG  221 (327)
Q Consensus       210 ---~~~~d~v~d~~g  221 (327)
                         ..++|++++++|
T Consensus        97 ~~~~g~iDiLVnnAG  111 (613)
T 3oml_A           97 IKAFGRVDILVNNAG  111 (613)
T ss_dssp             --------CEECCCC
T ss_pred             HHHCCCCcEEEECCC
Confidence               136899999988

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=94.30  E-value=0.12  Score=44.94  Aligned_cols=72  Identities=19%  Similarity=0.259  Sum_probs=47.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH---HHHHHcC----CCEEE-eCC-CCChhhhccCccEEEeC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV---EFVKELG----ADKVI-DYR-KTKYEDIEEKFDVLYDT  219 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~---~~~~~~g----~~~v~-~~~-~~~~~~~~~~~d~v~d~  219 (327)
                      +++|||+||+|.+|...+..+... |.+++++++++++.   ..+..+.    ...+. |-. ...+.....++|+||.+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   87 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQK-GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV   87 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHT-TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence            688999999999999988888777 88888878765432   2222221    11121 222 23344456789999987


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      ++
T Consensus        88 A~   89 (338)
T 2rh8_A           88 AT   89 (338)
T ss_dssp             SS
T ss_pred             CC
Confidence            65

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=94.28  E-value=0.076  Score=45.91  Aligned_cols=72  Identities=18%  Similarity=0.298  Sum_probs=45.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-Cccc---HHHHHHcCC---C-EEE--eCCC-CChhhhccCccEEE
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPK---VEFVKELGA---D-KVI--DYRK-TKYEDIEEKFDVLY  217 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~---~~~~~~~g~---~-~v~--~~~~-~~~~~~~~~~d~v~  217 (327)
                      |++|||+||+|.+|..++..+... |.++++..+ ++++   ...+.++..   . .++  |-.+ ..+.....++|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLEN-GYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHC-CCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            578999999999999998888777 888888776 5422   222222211   0 111  2111 23334457899999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .+++
T Consensus        80 h~A~   83 (322)
T 2p4h_X           80 HTAS   83 (322)
T ss_dssp             ECCC
T ss_pred             EcCC
Confidence            9875

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=94.25  E-value=0.2  Score=42.22  Aligned_cols=74  Identities=23%  Similarity=0.393  Sum_probs=46.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHH----HHcCCCE-EEeCCCCChhh---h-------c
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFV----KELGADK-VIDYRKTKYED---I-------E  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~----~~~g~~~-v~~~~~~~~~~---~-------~  210 (327)
                      ..+++++|+||++++|.+++..+... |++++++. ++.++.+..    ++.+... .+.-+-.+...   .       .
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDA-GMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999988888777 99988887 444433322    2233222 22222222211   1       1


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus       102 g~id~li~nAg  112 (269)
T 3gk3_A          102 GKVDVLINNAG  112 (269)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=94.23  E-value=0.1  Score=45.25  Aligned_cols=72  Identities=21%  Similarity=0.245  Sum_probs=45.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCC---cccHHH-HHHc----CCCE-EEeCCCC-ChhhhccCccEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTS---TPKVEF-VKEL----GADK-VIDYRKT-KYEDIEEKFDVL  216 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~---~~~~~~-~~~~----g~~~-v~~~~~~-~~~~~~~~~d~v  216 (327)
                      .+++++|+| +|+.|.+++..+... |+ ++.++.++   .++.+. ++++    +... +++..+. ...+.+..+|++
T Consensus       147 ~gk~~lVlG-AGGaaraia~~L~~~-G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI  224 (312)
T 3t4e_A          147 RGKTMVLLG-AGGAATAIGAQAAIE-GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL  224 (312)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHc-CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence            578999999 699999998888888 87 56666677   443332 2333    2221 2222211 013345679999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      +++++
T Consensus       225 INaTp  229 (312)
T 3t4e_A          225 TNGTK  229 (312)
T ss_dssp             EECSS
T ss_pred             EECCc
Confidence            99976

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=94.21  E-value=0.036  Score=45.50  Aligned_cols=37  Identities=19%  Similarity=0.271  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .++++||+||++++|.+.++.+... |.++++..++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~   41 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESE-HTIVHVASRQTG   41 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCST-TEEEEEESGGGT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEecCCcc
Confidence            4678999999999999988888777 888888776543

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=94.21  E-value=0.048  Score=45.00  Aligned_cols=95  Identities=17%  Similarity=0.222  Sum_probs=62.0

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC-EE--EeCCCCCh-hhh--ccCc
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD-KV--IDYRKTKY-EDI--EEKF  213 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~-~v--~~~~~~~~-~~~--~~~~  213 (327)
                      ....++++||-+| || .|..+..+++...+.+++.++.+++..+.+++    .|.. .+  +..+.... ...  ...+
T Consensus        50 ~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~f  127 (233)
T 2gpy_A           50 LKMAAPARILEIG-TA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLF  127 (233)
T ss_dssp             HHHHCCSEEEEEC-CT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCE
T ss_pred             HhccCCCEEEEec-CC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCc
Confidence            3445788999998 67 68888889988645778888888887777754    3542 12  22211121 112  2468


Q ss_pred             cEEEeCCCC------chhhhhhhcCCCcEEEee
Q 020320          214 DVLYDTIGD------CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       214 d~v~d~~g~------~~~~~~~l~~~g~~v~~g  240 (327)
                      |+|+.....      ...+.+.|+++|.++...
T Consensus       128 D~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          128 DVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             EEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             cEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            999855431      155678899999988753

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=94.20  E-value=0.057  Score=46.13  Aligned_cols=42  Identities=24%  Similarity=0.427  Sum_probs=35.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .+++++|+||+|++|.+++..+... |.+++++.+++++.+.+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   68 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKV   68 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            4689999999999999998888877 99999999887765443

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=94.20  E-value=0.098  Score=46.34  Aligned_cols=74  Identities=14%  Similarity=0.061  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEE-eCC-C-CChhhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVI-DYR-K-TKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~-~~~-~-~~~~~~~~~~d~v~d~~g  221 (327)
                      .+.+|||+||+|.+|...+..+...+|.+++++++++++...+.+ .+...+. |-. + ..+.....++|+||.+++
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~  100 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA  100 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence            357899999999999998887776547889999887765443322 2333222 222 1 122234468999999887

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=94.18  E-value=0.15  Score=43.38  Aligned_cols=87  Identities=18%  Similarity=0.278  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHH-HHHHcCC--CEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVE-FVKELGA--DKVIDYRKTKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~-~~~~~g~--~~v~~~~~~~~~~~~~~~d~v~d~~g~~  223 (327)
                      .+++++|+| +|+.|.+++..+... |+ ++.++.++.++.+ ++++++.  -.+....  +...  ..+|++++++...
T Consensus       119 ~~k~~lvlG-aGg~~~aia~~L~~~-G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~--~l~~--~~~DivInaTp~g  192 (272)
T 3pwz_A          119 RNRRVLLLG-AGGAVRGALLPFLQA-GPSELVIANRDMAKALALRNELDHSRLRISRYE--ALEG--QSFDIVVNATSAS  192 (272)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG--GGTT--CCCSEEEECSSGG
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH--Hhcc--cCCCEEEECCCCC
Confidence            688999999 699999988888887 86 6667778877654 4456653  1222211  1111  5799999998632


Q ss_pred             ------hhhhhhhcCCCcEEEee
Q 020320          224 ------KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ------~~~~~~l~~~g~~v~~g  240 (327)
                            ......++++..++++-
T Consensus       193 m~~~~~~i~~~~l~~~~~V~Dlv  215 (272)
T 3pwz_A          193 LTADLPPLPADVLGEAALAYELA  215 (272)
T ss_dssp             GGTCCCCCCGGGGTTCSEEEESS
T ss_pred             CCCCCCCCCHHHhCcCCEEEEee
Confidence                  11224456666555553

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=94.15  E-value=0.16  Score=42.76  Aligned_cols=73  Identities=21%  Similarity=0.325  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcccH--HHHH----HcCCCEEE-eCCCCChhh----------
Q 020320          148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTPKV--EFVK----ELGADKVI-DYRKTKYED----------  208 (327)
Q Consensus       148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~~~--~~~~----~~g~~~v~-~~~~~~~~~----------  208 (327)
                      .+++++|+||+  +++|.+++..+... |++++++.++.++.  +.++    +.+....+ ..+-.+..+          
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEM-GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHT-SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHC-CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            47899999998  89999988887777 99999888665432  2232    33433221 111111111          


Q ss_pred             hccCccEEEeCCC
Q 020320          209 IEEKFDVLYDTIG  221 (327)
Q Consensus       209 ~~~~~d~v~d~~g  221 (327)
                      ...++|++++++|
T Consensus        98 ~~g~id~li~nAg  110 (267)
T 3gdg_A           98 DFGQIDAFIANAG  110 (267)
T ss_dssp             HTSCCSEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence            1147899999987

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=94.14  E-value=0.089  Score=45.86  Aligned_cols=74  Identities=20%  Similarity=0.196  Sum_probs=47.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH-HHHHcCCCEEEeCCCCC---hhhhcc--CccEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE-FVKELGADKVIDYRKTK---YEDIEE--KFDVLYDTI  220 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~-~~~~~g~~~v~~~~~~~---~~~~~~--~~d~v~d~~  220 (327)
                      -.+.+|||+||+|.+|..++..+... |.++++++++..... .++++..-..+..+-.+   +.....  ++|++|.++
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   96 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQ-GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA   96 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGG-TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence            45679999999999999999888887 899998887543321 11122111122211122   223345  899999998


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        97 ~   97 (330)
T 2pzm_A           97 A   97 (330)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=94.14  E-value=0.081  Score=45.06  Aligned_cols=42  Identities=24%  Similarity=0.315  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .++++||+||+|++|.++++.+... |++++++.+++++.+.+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   51 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAA-GASVMIVGRNPDKLAGA   51 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988887777 99999998887765433

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=94.10  E-value=0.098  Score=44.91  Aligned_cols=101  Identities=24%  Similarity=0.275  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..+++++.+.     ..     ...++.+.+...|+++-++...    
T Consensus       121 ~g~tvGIIG-lG~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~-----~~-----~~~~l~ell~~aDiV~l~~P~t~~t~  188 (290)
T 3gvx_A          121 YGKALGILG-YGGIGRRVAHLAKAF-GMRVIAYTRSSVDQNV-----DV-----ISESPADLFRQSDFVLIAIPLTDKTR  188 (290)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSSCCCTTC-----SE-----ECSSHHHHHHHCSEEEECCCCCTTTT
T ss_pred             ecchheeec-cCchhHHHHHHHHhh-CcEEEEEecccccccc-----cc-----ccCChHHHhhccCeEEEEeeccccch
Confidence            478999999 999999999999998 9999999877654321     11     1124555567789999887621    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..|+++..++.++-...          .+   -+.+.+.+++|.+.
T Consensus       189 ~li~~~~l~~mk~gailIN~aRG~~----------vd---~~aL~~aL~~g~i~  229 (290)
T 3gvx_A          189 GMVNSRLLANARKNLTIVNVARADV----------VS---KPDMIGFLKERSDV  229 (290)
T ss_dssp             TCBSHHHHTTCCTTCEEEECSCGGG----------BC---HHHHHHHHHHCTTC
T ss_pred             hhhhHHHHhhhhcCceEEEeehhcc----------cC---Ccchhhhhhhccce
Confidence                345677888888887753221          11   23556667777765

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=94.09  E-value=0.12  Score=42.67  Aligned_cols=72  Identities=18%  Similarity=0.292  Sum_probs=46.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccHHHH----HHcCCCE-EEeCCCCChh---hhc-------cC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFV----KELGADK-VIDYRKTKYE---DIE-------EK  212 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~~~~----~~~g~~~-v~~~~~~~~~---~~~-------~~  212 (327)
                      |++++|+||+|.+|...++.+... |.++++. .+++++.+.+    ++.+... .+..+-.+..   ...       .+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~-G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKA-GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999988888877 8988885 5666554332    2234322 1211112211   111       37


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        80 id~li~~Ag   88 (244)
T 1edo_A           80 IDVVVNNAG   88 (244)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=94.08  E-value=0.18  Score=42.47  Aligned_cols=83  Identities=18%  Similarity=0.276  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCch--
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCK--  224 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--  224 (327)
                      .+ +++|+| +|.+|.+.+..+... |.++.+..+++++. +++++++..  +    .+..+. ..+|+++.+++...  
T Consensus       116 ~~-~v~iiG-~G~~g~~~a~~l~~~-g~~v~v~~r~~~~~~~l~~~~~~~--~----~~~~~~-~~~Divi~~tp~~~~~  185 (263)
T 2d5c_A          116 KG-PALVLG-AGGAGRAVAFALREA-GLEVWVWNRTPQRALALAEEFGLR--A----VPLEKA-REARLLVNATRVGLED  185 (263)
T ss_dssp             CS-CEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHHHTCE--E----CCGGGG-GGCSEEEECSSTTTTC
T ss_pred             CC-eEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccc--h----hhHhhc-cCCCEEEEccCCCCCC
Confidence            45 899999 799999998888887 77777777777664 445667753  2    133344 67999999987431  


Q ss_pred             ---hh--hhhhcCCCcEEEee
Q 020320          225 ---NS--FVVAKDNAPIVDIT  240 (327)
Q Consensus       225 ---~~--~~~l~~~g~~v~~g  240 (327)
                         ..  ...++++..++.++
T Consensus       186 ~~~~~l~~~~l~~g~~viD~~  206 (263)
T 2d5c_A          186 PSASPLPAELFPEEGAAVDLV  206 (263)
T ss_dssp             TTCCSSCGGGSCSSSEEEESC
T ss_pred             CCCCCCCHHHcCCCCEEEEee
Confidence               11  34566666666654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=94.05  E-value=0.15  Score=42.74  Aligned_cols=73  Identities=29%  Similarity=0.304  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cHHHHHH----cCCCE-EEeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKE----LGADK-VIDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~~~~~~----~g~~~-v~~~~~~~~~~---~-------~~  211 (327)
                      .+++++|+||+|++|.+++..+... |++++++.++++ ..+.+.+    .+... .+..+-.+..+   .       ..
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAK-GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999988888777 999988876543 3333332    22221 22112122211   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        85 ~id~lv~~Ag   94 (264)
T 3i4f_A           85 KIDFLINNAG   94 (264)
T ss_dssp             CCCEEECCCC
T ss_pred             CCCEEEECCc
Confidence            7999999988

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=94.04  E-value=0.26  Score=43.13  Aligned_cols=98  Identities=16%  Similarity=0.196  Sum_probs=62.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC--CcEEEEeCCcccHHHHHHc----C-----------CCE--EEe
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG--ASHVVATTSTPKVEFVKEL----G-----------ADK--VID  200 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g--~~~v~~~~~~~~~~~~~~~----g-----------~~~--v~~  200 (327)
                      .+....+.++++||-.| ||. |..+..+++.. |  .+++.++.++...+.+++.    +           .+.  ++.
T Consensus        97 ~l~~l~~~~g~~VLDiG-~G~-G~~~~~la~~~-g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~  173 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAG-SGS-GGMSLFLSKAV-GSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH  173 (336)
T ss_dssp             HHHHHTCCTTCEEEEEC-CTT-SHHHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred             HHHhcCCCCCCEEEEeC-CCc-CHHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence            44556789999999998 777 88888888876 4  6788888888877776542    1           111  122


Q ss_pred             CCCCChh-hh-ccCccEEEeCCCC----chhhhhhhcCCCcEEEee
Q 020320          201 YRKTKYE-DI-EEKFDVLYDTIGD----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       201 ~~~~~~~-~~-~~~~d~v~d~~g~----~~~~~~~l~~~g~~v~~g  240 (327)
                      .+..... .. ...+|+|+-....    ...+.++|+++|.++...
T Consensus       174 ~d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~  219 (336)
T 2b25_A          174 KDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  219 (336)
T ss_dssp             SCTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             CChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            2222111 11 1358999854432    256778999999998653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=94.01  E-value=0.2  Score=42.16  Aligned_cols=73  Identities=11%  Similarity=0.237  Sum_probs=46.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHH-H---HHcCCCE-EEeCCCCChhh---h-------cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEF-V---KELGADK-VIDYRKTKYED---I-------EE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~-~---~~~g~~~-v~~~~~~~~~~---~-------~~  211 (327)
                      .++++||+||+|++|.+++..+... |+++++.. ++.++.+. +   ++.+... .+..+-.+..+   .       ..
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAAD-GFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4679999999999999988888777 99887766 44443322 2   2233332 22222222211   1       13


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus       104 ~id~li~nAg  113 (267)
T 4iiu_A          104 AWYGVVSNAG  113 (267)
T ss_dssp             CCSEEEECCC
T ss_pred             CccEEEECCC
Confidence            7999999987

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=94.01  E-value=0.22  Score=43.34  Aligned_cols=74  Identities=19%  Similarity=0.184  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHH----cCCC-EEEeCCCCC---hhhhcc--CccEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKE----LGAD-KVIDYRKTK---YEDIEE--KFDVL  216 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~----~g~~-~v~~~~~~~---~~~~~~--~~d~v  216 (327)
                      .+.+|||+||+|.+|..+++.+... |.+++++.++.++. +..++    .+.. ..+..+-.+   +.....  ++|++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAH-GYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA   82 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHC-CCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence            4678999999999999998888887 99999888755432 22222    1322 122211122   222233  79999


Q ss_pred             EeCCCC
Q 020320          217 YDTIGD  222 (327)
Q Consensus       217 ~d~~g~  222 (327)
                      ++++|.
T Consensus        83 ih~A~~   88 (341)
T 3enk_A           83 IHFAAL   88 (341)
T ss_dssp             EECCCC
T ss_pred             EECccc
Confidence            999873

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=93.93  E-value=0.16  Score=48.42  Aligned_cols=73  Identities=22%  Similarity=0.330  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc---------ccHHH-H---HHcCCCEEEeCCCC-Chhh-----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST---------PKVEF-V---KELGADKVIDYRKT-KYED-----  208 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~---------~~~~~-~---~~~g~~~v~~~~~~-~~~~-----  208 (327)
                      .++.++|+||++++|.+.+..+... |+++++..++.         ++.+. +   ++.|...+.+..+. +...     
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~-Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKL-GAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETA   85 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHc-CCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHH
Confidence            4788999999999999988888877 99998876543         33322 2   23354444443332 2111     


Q ss_pred             --hccCccEEEeCCC
Q 020320          209 --IEEKFDVLYDTIG  221 (327)
Q Consensus       209 --~~~~~d~v~d~~g  221 (327)
                        ...++|++++++|
T Consensus        86 ~~~~G~iDiLVnNAG  100 (604)
T 2et6_A           86 VKNFGTVHVIINNAG  100 (604)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence              1257999999988

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=93.91  E-value=0.12  Score=41.28  Aligned_cols=33  Identities=21%  Similarity=0.358  Sum_probs=29.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      +++|+||+|.+|.+.+..+. . |.+++++.++++
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~-g~~V~~~~r~~~   37 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-K-KAEVITAGRHSG   37 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-T-TSEEEEEESSSS
T ss_pred             EEEEEcCCcHHHHHHHHHHH-C-CCeEEEEecCcc
Confidence            79999999999999988888 7 999988887654

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=93.82  E-value=0.09  Score=41.94  Aligned_cols=98  Identities=12%  Similarity=0.106  Sum_probs=61.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cCC-CE--EEeCCCCChhhh-ccC
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LGA-DK--VIDYRKTKYEDI-EEK  212 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g~-~~--v~~~~~~~~~~~-~~~  212 (327)
                      ....++++++||-.| ||. |..+..+++..+ ..+++.++.+++..+.+++    .|. +.  ++..+..++... ...
T Consensus        16 ~~~~~~~~~~vLDlG-cG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~   93 (197)
T 3eey_A           16 IKMFVKEGDTVVDAT-CGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCP   93 (197)
T ss_dssp             HHHHCCTTCEEEESC-CTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSC
T ss_pred             HHhcCCCCCEEEEcC-CCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCC
Confidence            345667899999988 676 788888888862 2578888888887777644    333 11  222221222211 246


Q ss_pred             ccEEEeCCCC------------------chhhhhhhcCCCcEEEeeC
Q 020320          213 FDVLYDTIGD------------------CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       213 ~d~v~d~~g~------------------~~~~~~~l~~~g~~v~~g~  241 (327)
                      +|+++...+-                  ...+.+.|+++|+++....
T Consensus        94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            8998854321                  2445678899999887654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=93.79  E-value=0.11  Score=45.28  Aligned_cols=71  Identities=14%  Similarity=0.028  Sum_probs=45.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEE-eCCC-C-ChhhhccCccEEEeCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVI-DYRK-T-KYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~-~~~~-~-~~~~~~~~~d~v~d~~g  221 (327)
                      +|||+||+|.+|..++..+...+|.+++++++++.+.+.+.+ .+...+. |-.+ . .+.....++|+||.+++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~   76 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEccc
Confidence            699999999999998887776536888888887665432211 1222221 2222 1 12334468999999877

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=93.79  E-value=0.078  Score=44.54  Aligned_cols=41  Identities=17%  Similarity=0.280  Sum_probs=34.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF  189 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~  189 (327)
                      .++++||+||+|++|.++++.+... |++++++.+++++.+.
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~   44 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKA-GATVYITGRHLDTLRV   44 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            4689999999999999988888877 9999988888776543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=93.78  E-value=0.18  Score=43.87  Aligned_cols=72  Identities=24%  Similarity=0.243  Sum_probs=46.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH--HHHHHcCC--CE-EEeCCCCC---hhhhcc--CccEEEe
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV--EFVKELGA--DK-VIDYRKTK---YEDIEE--KFDVLYD  218 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~--~~~~~~g~--~~-v~~~~~~~---~~~~~~--~~d~v~d  218 (327)
                      +.+|||+||+|.+|..++..+... |.+++++++++++.  ..+++++.  .. .+..+-.+   +.....  ++|++|.
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEK-GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            578999999999999998888777 89999888776542  23444431  11 11111112   122233  4699999


Q ss_pred             CCC
Q 020320          219 TIG  221 (327)
Q Consensus       219 ~~g  221 (327)
                      ++|
T Consensus        82 ~A~   84 (345)
T 2z1m_A           82 LAA   84 (345)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=93.66  E-value=0.38  Score=43.50  Aligned_cols=41  Identities=22%  Similarity=0.328  Sum_probs=31.4

Q ss_pred             hcCCCCCCEEEEEcCCchHHHH--HHHHHHhhcCCcEEEEeCCc
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTL--VIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~--a~~la~~~~g~~~v~~~~~~  184 (327)
                      +.....++++||+||++++|++  .+..+... |++++++.++.
T Consensus        54 ~~~~~~gK~aLVTGassGIG~A~aia~ala~~-Ga~Vi~~~r~~   96 (418)
T 4eue_A           54 AIGFRGPKKVLIVGASSGFGLATRISVAFGGP-EAHTIGVSYET   96 (418)
T ss_dssp             SCCCCCCSEEEEESCSSHHHHHHHHHHHHSSS-CCEEEEEECCC
T ss_pred             cCcCCCCCEEEEECCCcHHHHHHHHHHHHHhC-CCEEEEEecCc
Confidence            3445789999999999999998  55555444 89998887643

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=93.64  E-value=0.4  Score=41.93  Aligned_cols=71  Identities=13%  Similarity=0.115  Sum_probs=46.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc----cHHHH-HHc------CCCEEEeCCCCC---hhhhccCcc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP----KVEFV-KEL------GADKVIDYRKTK---YEDIEEKFD  214 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~----~~~~~-~~~------g~~~v~~~~~~~---~~~~~~~~d  214 (327)
                      +.+|||+||+|.+|..++..+... |.+++++++++.    +...+ +.+      +.. ++..+-.+   +.....++|
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKL-DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK-FIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEE-EEECCTTSHHHHHHHHTTCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCccchhhHHHHhhhcccccCCceE-EEECCCCCHHHHHHHhcCCC
Confidence            578999999999999998888877 889998887553    22222 111      222 22222122   233456899


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      +||.+++
T Consensus       105 ~vih~A~  111 (352)
T 1sb8_A          105 YVLHQAA  111 (352)
T ss_dssp             EEEECCS
T ss_pred             EEEECCc
Confidence            9999987

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=93.61  E-value=0.12  Score=43.01  Aligned_cols=72  Identities=14%  Similarity=0.137  Sum_probs=47.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc----CCCE-EEeCCCCChh---hhc-------cC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL----GADK-VIDYRKTKYE---DIE-------EK  212 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~----g~~~-v~~~~~~~~~---~~~-------~~  212 (327)
                      +++++|+||+|.+|.+++..+... |.+++++.+++++.+.+ +++    +... .+..+-.+..   ...       .+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLAR-GDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999988888777 89999888887665443 333    2221 1211112211   111       37


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        81 id~li~~Ag   89 (250)
T 2cfc_A           81 IDVLVNNAG   89 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=93.61  E-value=0.18  Score=44.35  Aligned_cols=72  Identities=14%  Similarity=0.214  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH-HHHHc----CCCEEEeCCCCC---hhhhcc--CccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE-FVKEL----GADKVIDYRKTK---YEDIEE--KFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~-~~~~~----g~~~v~~~~~~~---~~~~~~--~~d~v~  217 (327)
                      .+.+|||+||+|.+|..++..+... |.+++++++++.+.. ..+.+    +.. .+..+-.+   +.....  ++|+||
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~d~vi   85 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPTVPSLFETARVADGMQ-SEIGDIRDQNKLLESIREFQPEIVF   85 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCSSSSCHHHHTTTTTTSE-EEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhC-CCeEEEEeCCCcccchhhHhhccCCceE-EEEccccCHHHHHHHHHhcCCCEEE
Confidence            3578999999999999998888877 899999887665432 22222    122 22222122   222233  389999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .++|
T Consensus        86 h~A~   89 (357)
T 1rkx_A           86 HMAA   89 (357)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            9987

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=93.58  E-value=0.42  Score=40.54  Aligned_cols=92  Identities=12%  Similarity=0.140  Sum_probs=58.4

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCccc-HHHHHHcCCCEEEeCCCCChhhhccCccEEEe
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYD  218 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d  218 (327)
                      +...+...+.+++|+| +|+.|.+++..+... |+ ++.++.++.++ .+++++++.+  +...   ..  ...+|++++
T Consensus       111 l~~~~~~~~~~vlvlG-aGgaarav~~~L~~~-G~~~i~v~nRt~~ka~~la~~~~~~--~~~~---~~--~~~~DivIn  181 (271)
T 1npy_A          111 IEKYHLNKNAKVIVHG-SGGMAKAVVAAFKNS-GFEKLKIYARNVKTGQYLAALYGYA--YINS---LE--NQQADILVN  181 (271)
T ss_dssp             HHHTTCCTTSCEEEEC-SSTTHHHHHHHHHHT-TCCCEEEECSCHHHHHHHHHHHTCE--EESC---CT--TCCCSEEEE
T ss_pred             HHHhCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCc--cchh---hh--cccCCEEEE
Confidence            3334444678999999 899999988888888 76 56666687766 4555667652  2111   11  357999999


Q ss_pred             CCCCch----------hhhhhhcCCCcEEEeeC
Q 020320          219 TIGDCK----------NSFVVAKDNAPIVDITW  241 (327)
Q Consensus       219 ~~g~~~----------~~~~~l~~~g~~v~~g~  241 (327)
                      ++....          .....+.++..++.+-.
T Consensus       182 aTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY  214 (271)
T 1npy_A          182 VTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA  214 (271)
T ss_dssp             CSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             CCCCCccCccccCCCCCCHHHcCCCCEEEEeec
Confidence            986321          11245556666666643

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=93.52  E-value=0.2  Score=41.19  Aligned_cols=97  Identities=20%  Similarity=0.158  Sum_probs=62.9

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC--CCEE--EeCCCCCh---hhhccCc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG--ADKV--IDYRKTKY---EDIEEKF  213 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g--~~~v--~~~~~~~~---~~~~~~~  213 (327)
                      +....++++++||-+| ||. |..+..+++..+..+++.++.+++..+.+++.-  .+.+  +..+....   ......+
T Consensus        67 l~~~~~~~~~~VLDlG-cG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~  144 (230)
T 1fbn_A           67 LKVMPIKRDSKILYLG-ASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKV  144 (230)
T ss_dssp             CCCCCCCTTCEEEEES-CCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCE
T ss_pred             ccccCCCCCCEEEEEc-ccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccE
Confidence            4445678899999998 776 888889998863367888888988777765432  1222  12222221   1111468


Q ss_pred             cEEEeCCCCc-------hhhhhhhcCCCcEEEe
Q 020320          214 DVLYDTIGDC-------KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       214 d~v~d~~g~~-------~~~~~~l~~~g~~v~~  239 (327)
                      |+++......       ..+.+.|+|+|.++..
T Consensus       145 D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            9999554422       4456789999998875

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=93.50  E-value=0.18  Score=44.40  Aligned_cols=83  Identities=14%  Similarity=0.181  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC-----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD-----  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~-----  222 (327)
                      .|++|.|+| .|.+|...++.++.+ |.++++..++++..  . +.+...      .++.+.+...|+++-++..     
T Consensus       147 ~gktvgIiG-lG~IG~~vA~~l~~~-G~~V~~~d~~~~~~--~-~~~~~~------~~l~ell~~aDvV~l~~Plt~~t~  215 (343)
T 2yq5_A          147 YNLTVGLIG-VGHIGSAVAEIFSAM-GAKVIAYDVAYNPE--F-EPFLTY------TDFDTVLKEADIVSLHTPLFPSTE  215 (343)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCGG--G-TTTCEE------CCHHHHHHHCSEEEECCCCCTTTT
T ss_pred             CCCeEEEEe-cCHHHHHHHHHHhhC-CCEEEEECCChhhh--h-hccccc------cCHHHHHhcCCEEEEcCCCCHHHH
Confidence            488999999 999999999999998 99999998776541  1 111111      1455566789999988762     


Q ss_pred             --c-hhhhhhhcCCCcEEEeeC
Q 020320          223 --C-KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       223 --~-~~~~~~l~~~g~~v~~g~  241 (327)
                        + ...+..|+++..++.++-
T Consensus       216 ~li~~~~l~~mk~gailIN~aR  237 (343)
T 2yq5_A          216 NMIGEKQLKEMKKSAYLINCAR  237 (343)
T ss_dssp             TCBCHHHHHHSCTTCEEEECSC
T ss_pred             HHhhHHHHhhCCCCcEEEECCC
Confidence              1 345677889988888753

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=93.48  E-value=0.057  Score=46.49  Aligned_cols=72  Identities=17%  Similarity=0.252  Sum_probs=45.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhh-cCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhcc--CccEEEeCCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHF-YGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEE--KFDVLYDTIGD  222 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~-~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~--~~d~v~d~~g~  222 (327)
                      +.+|||+||+|.+|...+..+... +|.+++++++++.+.....  +...+. |-.+ ..+.....  ++|+||.+++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~   78 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN--SGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL   78 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH--SSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC--CCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            367999999999999887766654 3678888887665533222  333322 2221 12222334  79999999874

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=93.42  E-value=0.057  Score=45.19  Aligned_cols=94  Identities=14%  Similarity=0.226  Sum_probs=59.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cCCC-EE--EeCCCCChhhh---ccCc
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LGAD-KV--IDYRKTKYEDI---EEKF  213 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~---~~~~  213 (327)
                      ...++.+||-+| ||. |..+..+++.+. +.+++.++.+++..+.+++    .|.. .+  +..+..+....   ...+
T Consensus        60 ~~~~~~~VLdiG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~f  137 (248)
T 3tfw_A           60 RLTQAKRILEIG-TLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAF  137 (248)
T ss_dssp             HHHTCSEEEEEC-CTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCC
T ss_pred             hhcCCCEEEEec-CCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCe
Confidence            345678999998 664 888889998874 5678888888887777754    3543 12  22111111111   1269


Q ss_pred             cEEEeCCCC------chhhhhhhcCCCcEEEee
Q 020320          214 DVLYDTIGD------CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       214 d~v~d~~g~------~~~~~~~l~~~g~~v~~g  240 (327)
                      |+|+-....      ...+.+.|+++|.++.-.
T Consensus       138 D~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          138 DLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             EEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            999943321      255678999999887654

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=93.40  E-value=0.36  Score=41.13  Aligned_cols=66  Identities=23%  Similarity=0.306  Sum_probs=49.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      .+|.|+| +|.+|...+..+... |.++++..+++++.+.+.+.|....     .+..+.....|++|-++..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~~~~~~aDvvi~~vp~   67 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKA-GCSVTIWNRSPEKAEELAALGAERA-----ATPCEVVESCPVTFAMLAD   67 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHHHHCSEEEECCSS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHCCCeec-----CCHHHHHhcCCEEEEEcCC
Confidence            4789999 899999888888777 8888888899888888777665321     2334445567888888763

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=93.38  E-value=0.3  Score=41.04  Aligned_cols=97  Identities=15%  Similarity=0.179  Sum_probs=63.6

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC---EEEeCCCCChhhhccCc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD---KVIDYRKTKYEDIEEKF  213 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~  213 (327)
                      +....+.++.+||-+| ||. |..+..+++.. +.+++.++.+++..+.+++    .|..   .++..+-.+.......+
T Consensus        54 ~~~~~~~~~~~vLDiG-cG~-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f  130 (273)
T 3bus_A           54 IALLDVRSGDRVLDVG-CGI-GKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASF  130 (273)
T ss_dssp             HHHSCCCTTCEEEEES-CTT-SHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCE
T ss_pred             HHhcCCCCCCEEEEeC-CCC-CHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCc
Confidence            3567788999999998 665 77788888877 8899999999887776654    2321   12222211111112468


Q ss_pred             cEEEeCC--C---Cc----hhhhhhhcCCCcEEEee
Q 020320          214 DVLYDTI--G---DC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       214 d~v~d~~--g---~~----~~~~~~l~~~g~~v~~g  240 (327)
                      |+|+..-  .   ..    ..+.+.|+|+|+++...
T Consensus       131 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          131 DAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             EEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             cEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            9988432  2   11    44567899999988764

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=93.38  E-value=0.35  Score=41.99  Aligned_cols=85  Identities=14%  Similarity=0.207  Sum_probs=59.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---h-
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---K-  224 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~-  224 (327)
                      ..+|.|+| +|.+|...+..+... |.++++..+++++.+.+.+.|+...     .+..+.....|+||-++...   . 
T Consensus        31 ~~~I~iIG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~l~~~g~~~~-----~~~~e~~~~aDvVi~~vp~~~~~~~  103 (320)
T 4dll_A           31 ARKITFLG-TGSMGLPMARRLCEA-GYALQVWNRTPARAASLAALGATIH-----EQARAAARDADIVVSMLENGAVVQD  103 (320)
T ss_dssp             CSEEEEEC-CTTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTTCEEE-----SSHHHHHTTCSEEEECCSSHHHHHH
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHhC-CCeEEEEcCCHHHHHHHHHCCCEee-----CCHHHHHhcCCEEEEECCCHHHHHH
Confidence            46899999 899999888887777 8888888899888887777665322     23444556788999888742   1 


Q ss_pred             -----hhhhhhcCCCcEEEee
Q 020320          225 -----NSFVVAKDNAPIVDIT  240 (327)
Q Consensus       225 -----~~~~~l~~~g~~v~~g  240 (327)
                           .....+.++..++..+
T Consensus       104 v~~~~~~~~~l~~~~~vi~~s  124 (320)
T 4dll_A          104 VLFAQGVAAAMKPGSLFLDMA  124 (320)
T ss_dssp             HHTTTCHHHHCCTTCEEEECS
T ss_pred             HHcchhHHhhCCCCCEEEecC
Confidence                 2233455666665554

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=93.35  E-value=0.87  Score=34.54  Aligned_cols=88  Identities=13%  Similarity=0.076  Sum_probs=56.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC-cccHHHHHH-c--CCCEEEeCCCCChh---h-hccCccEEEeCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS-TPKVEFVKE-L--GADKVIDYRKTKYE---D-IEEKFDVLYDTI  220 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~-~~~~~~~~~-~--g~~~v~~~~~~~~~---~-~~~~~d~v~d~~  220 (327)
                      .++++|.| +|.+|...+..+... |.++++++++ +++.+.+.+ +  |.. ++..+..+..   + .+.++|.++-++
T Consensus         3 ~~~vlI~G-~G~vG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            3 KDHFIVCG-HSILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHC-CCCEEEEECCChHHHHHHHHhhcCCCe-EEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            56799999 799999999988887 8999999886 455544432 2  333 3433333221   2 246899999998


Q ss_pred             CCc--h----hhhhhhcCCCcEEEe
Q 020320          221 GDC--K----NSFVVAKDNAPIVDI  239 (327)
Q Consensus       221 g~~--~----~~~~~l~~~g~~v~~  239 (327)
                      +..  +    ...+.+.+..+++..
T Consensus        80 ~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           80 DNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             CChHHHHHHHHHHHHHCCCCEEEEE
Confidence            853  1    123344455565553

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=93.32  E-value=0.23  Score=44.06  Aligned_cols=49  Identities=29%  Similarity=0.325  Sum_probs=40.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH-HHHHcCCC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE-FVKELGAD  196 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~-~~~~~g~~  196 (327)
                      --.|++|+|.| .|.+|..+++.+... |+++++.+.++++.+ ++++++++
T Consensus       170 ~L~GktV~V~G-~G~VG~~~A~~L~~~-GakVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          170 SLEGLAVSVQG-LGNVAKALCKKLNTE-GAKLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCcCEEEEEC-chHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHcCCE
Confidence            35789999999 899999999999998 999887777777655 55667764

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=93.27  E-value=0.44  Score=41.00  Aligned_cols=67  Identities=18%  Similarity=0.092  Sum_probs=50.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      .+|.|+| +|.+|...+..+... |.++++..+++++.+.+.+.|......    +..+.....|++|-++..
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~~~----~~~e~~~~aDvvi~~vp~   74 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRA-GLSTWGADLNPQACANLLAEGACGAAA----SAREFAGVVDALVILVVN   74 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEEES----SSTTTTTTCSEEEECCSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHcCCccccC----CHHHHHhcCCEEEEECCC
Confidence            5799999 999999888777777 889998889999888888878654221    222334568899988874

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=93.25  E-value=0.23  Score=43.08  Aligned_cols=80  Identities=20%  Similarity=0.236  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|.++.|+| .|.+|...++.++.+ |.++++..++.++..      ..      ..+..+.+...|+++-++...    
T Consensus       143 ~g~~vgIIG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~~------~~------~~~l~ell~~aDvV~l~~p~~~~t~  208 (311)
T 2cuk_A          143 QGLTLGLVG-MGRIGQAVAKRALAF-GMRVVYHARTPKPLP------YP------FLSLEELLKEADVVSLHTPLTPETH  208 (311)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCSSS------SC------BCCHHHHHHHCSEEEECCCCCTTTT
T ss_pred             CCCEEEEEE-ECHHHHHHHHHHHHC-CCEEEEECCCCcccc------cc------cCCHHHHHhhCCEEEEeCCCChHHH
Confidence            578999999 999999999999988 999888887655432      11      123444556788888876421    


Q ss_pred             ----hhhhhhhcCCCcEEEeeC
Q 020320          224 ----KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~  241 (327)
                          ...+..++++..++.++.
T Consensus       209 ~li~~~~l~~mk~ga~lin~sr  230 (311)
T 2cuk_A          209 RLLNRERLFAMKRGAILLNTAR  230 (311)
T ss_dssp             TCBCHHHHTTSCTTCEEEECSC
T ss_pred             hhcCHHHHhhCCCCcEEEECCC
Confidence                235566778777777753

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=93.23  E-value=0.13  Score=44.80  Aligned_cols=73  Identities=16%  Similarity=0.181  Sum_probs=45.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-HHHHHHcCCCEEEeCCCCC---hhhhccC--ccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTK---YEDIEEK--FDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-~~~~~~~g~~~v~~~~~~~---~~~~~~~--~d~v~d~~g  221 (327)
                      .+.+|||+||+|.+|..++..+... |.+++++++++.. .+.+.++..-.++..+-.+   +.....+  +|+||.++|
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~   98 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLER-GDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA   98 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence            4678999999999999998888877 8899988876432 1111111111122221122   2223345  999999987

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=93.23  E-value=1.1  Score=36.59  Aligned_cols=87  Identities=17%  Similarity=0.189  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cH-HHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KV-EFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~-~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      .|.+|||+| +|.+|...+..+... |+++.++..... .. .++++.+... + ..... ...+.++|+||-+++..  
T Consensus        30 ~gk~VLVVG-gG~va~~ka~~Ll~~-GA~VtVvap~~~~~l~~l~~~~~i~~-i-~~~~~-~~dL~~adLVIaAT~d~~~  104 (223)
T 3dfz_A           30 KGRSVLVVG-GGTIATRRIKGFLQE-GAAITVVAPTVSAEINEWEAKGQLRV-K-RKKVG-EEDLLNVFFIVVATNDQAV  104 (223)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHGGG-CCCEEEECSSCCHHHHHHHHTTSCEE-E-CSCCC-GGGSSSCSEEEECCCCTHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHHcCCcEE-E-ECCCC-HhHhCCCCEEEECCCCHHH
Confidence            578899999 799999999998888 898888775332 23 2333322332 2 12211 23457899999998854  


Q ss_pred             hhhhhhhcCCCcEEEe
Q 020320          224 KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 ~~~~~~l~~~g~~v~~  239 (327)
                      +..+...+..|..+..
T Consensus       105 N~~I~~~ak~gi~VNv  120 (223)
T 3dfz_A          105 NKFVKQHIKNDQLVNM  120 (223)
T ss_dssp             HHHHHHHSCTTCEEEC
T ss_pred             HHHHHHHHhCCCEEEE
Confidence            4444444446766655

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=93.22  E-value=0.22  Score=43.06  Aligned_cols=96  Identities=18%  Similarity=0.169  Sum_probs=63.8

Q ss_pred             HhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC---EEEeCCCCChhhhccCc
Q 020320          142 KTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD---KVIDYRKTKYEDIEEKF  213 (327)
Q Consensus       142 ~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~  213 (327)
                      .... +.++++||=+| ||. |..+..+++.. +.+++.++.+++..+.+++    .|..   .++..+-.+.......+
T Consensus       110 ~~l~~~~~~~~vLDiG-cG~-G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f  186 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAG-CGR-GGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAV  186 (312)
T ss_dssp             TTSCCCCTTCEEEEES-CTT-SHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCE
T ss_pred             HHhccCCCCCEEEEec-CCC-CHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCE
Confidence            3444 78999999998 665 78888888887 8899999999887777754    4432   12222222211112468


Q ss_pred             cEEEeCCC----C----chhhhhhhcCCCcEEEee
Q 020320          214 DVLYDTIG----D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       214 d~v~d~~g----~----~~~~~~~l~~~g~~v~~g  240 (327)
                      |+|+..-.    .    +..+.+.|+|+|+++...
T Consensus       187 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~  221 (312)
T 3vc1_A          187 TASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT  221 (312)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            99985322    1    255678999999998775

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=93.21  E-value=0.28  Score=45.29  Aligned_cols=43  Identities=9%  Similarity=0.115  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhc--CCcEEEEeCCcccH
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFY--GASHVVATTSTPKV  187 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~--g~~~v~~~~~~~~~  187 (327)
                      ....+.+|||+||+|.+|..++..+....  |.+++++++++...
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~  113 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE  113 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH
Confidence            34568899999999999998877666553  57888888876643

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=93.16  E-value=0.13  Score=42.97  Aligned_cols=39  Identities=18%  Similarity=0.345  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV  187 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~  187 (327)
                      -++++||+||+|++|.+.+..+... |.+++++.+++++.
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~   59 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSK-SWNTISIDFRENPN   59 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCTT
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCcccc
Confidence            3689999999999999988888877 99999888876643

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=93.15  E-value=0.073  Score=46.50  Aligned_cols=84  Identities=18%  Similarity=0.275  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..++++..+.     .+....  ..++.+.+...|+++-++...    
T Consensus       136 ~gktvGIiG-lG~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~-----~~~~~~--~~~l~ell~~aDvV~l~lPlt~~t~  206 (324)
T 3evt_A          136 TGQQLLIYG-TGQIGQSLAAKASAL-GMHVIGVNTTGHPADH-----FHETVA--FTATADALATANFIVNALPLTPTTH  206 (324)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSCCCCTT-----CSEEEE--GGGCHHHHHHCSEEEECCCCCGGGT
T ss_pred             cCCeEEEEC-cCHHHHHHHHHHHhC-CCEEEEECCCcchhHh-----Hhhccc--cCCHHHHHhhCCEEEEcCCCchHHH
Confidence            488999999 999999999999998 9999998877654321     122211  122334456788888776521    


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          ...+..++++..++.++
T Consensus       207 ~li~~~~l~~mk~gailIN~a  227 (324)
T 3evt_A          207 HLFSTELFQQTKQQPMLINIG  227 (324)
T ss_dssp             TCBSHHHHHTCCSCCEEEECS
T ss_pred             HhcCHHHHhcCCCCCEEEEcC
Confidence                34456677777777765

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=93.12  E-value=1  Score=39.65  Aligned_cols=107  Identities=20%  Similarity=0.174  Sum_probs=68.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHHHHcCCCEEEeCCCCChhhhc--cCccEEEeCCCCc---
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIE--EKFDVLYDTIGDC---  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~--~~~d~v~d~~g~~---  223 (327)
                      -+|.|+| +|.+|..-+..++...+.+++.+. +++++.+.++++|.. +.    .++.+.+  ..+|+|+.++...   
T Consensus         6 ~~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~-~~----~~~~~ll~~~~~D~V~i~tp~~~h~   79 (359)
T 3e18_A            6 YQLVIVG-YGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLK-IY----ESYEAVLADEKVDAVLIATPNDSHK   79 (359)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCC-BC----SCHHHHHHCTTCCEEEECSCGGGHH
T ss_pred             CcEEEEC-cCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCc-ee----CCHHHHhcCCCCCEEEEcCCcHHHH
Confidence            4689999 899998777777666466776554 666777767777763 21    3344444  3799999998743   


Q ss_pred             hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                      ..+..+++.| +-+.+..+.          ..+.+..++++++.++....
T Consensus        80 ~~~~~al~aG-khVl~EKP~----------a~~~~ea~~l~~~a~~~g~~  118 (359)
T 3e18_A           80 ELAISALEAG-KHVVCEKPV----------TMTSEDLLAIMDVAKRVNKH  118 (359)
T ss_dssp             HHHHHHHHTT-CEEEEESSC----------CSSHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHCC-CCEEeeCCC----------cCCHHHHHHHHHHHHHhCCe
Confidence            4556677765 444555433          23445666666666654433

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=93.10  E-value=0.13  Score=42.51  Aligned_cols=39  Identities=13%  Similarity=0.216  Sum_probs=33.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      ..++++||+||+|++|.+++..+... |.+++++.+++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~   43 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRAR-NWWVASIDVVENE   43 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSCCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCChhh
Confidence            35789999999999999998888877 9999988887654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=93.09  E-value=0.12  Score=44.51  Aligned_cols=65  Identities=11%  Similarity=0.102  Sum_probs=37.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCC-CCChhhhcc--CccEEEeCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYR-KTKYEDIEE--KFDVLYDTIG  221 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~-~~~~~~~~~--~~d~v~d~~g  221 (327)
                      +.+|||+||+|.+|..++..+... |.++++++++..+.      + ....|-. ...+.....  ++|+||.++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~------~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~   69 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQN-NWHAVGCGFRRARP------K-FEQVNLLDSNAVHHIIHDFQPHVIVHCAA   69 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEC-------------------------CHHHHHHHCCSEEEECC-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhC-CCeEEEEccCCCCC------C-eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence            468999999999999998888877 88888887654431      1 0011111 122233333  4899998876

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=92.99  E-value=0.33  Score=44.50  Aligned_cols=73  Identities=19%  Similarity=0.375  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH---HHHHHcCCCEEE-eCCCCC-hhhh-------ccC-cc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV---EFVKELGADKVI-DYRKTK-YEDI-------EEK-FD  214 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~---~~~~~~g~~~v~-~~~~~~-~~~~-------~~~-~d  214 (327)
                      +++++||+|++|++|.+++..+... |++++++.+++...   +..++.+...+- |-.+.+ ....       ..+ +|
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~-Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARD-GATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            5789999999999999988887777 99988877654322   233455554322 222222 1111       124 99


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      .++++.|
T Consensus       291 ~lV~nAG  297 (454)
T 3u0b_A          291 ILVNNAG  297 (454)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999988

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=92.98  E-value=1.9  Score=37.23  Aligned_cols=96  Identities=13%  Similarity=0.069  Sum_probs=62.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhhccCccEE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~d~v  216 (327)
                      +....+..++++|+| +|..|...+..++...+.+ +.+..++ ...+++++    +|......    +..+..+++|+|
T Consensus       114 ~~La~~~~~~v~iIG-aG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~----~~~eav~~aDIV  187 (313)
T 3hdj_A          114 GALARPRSSVLGLFG-AGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA----APADIAAQADIV  187 (313)
T ss_dssp             HHHSCTTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC----CHHHHHHHCSEE
T ss_pred             HhhccCCCcEEEEEC-ccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe----CHHHHHhhCCEE
Confidence            333345678999999 8999988777666543554 5555566 55555544    46553322    455566789999


Q ss_pred             EeCCCCchhh--hhhhcCCCcEEEeeCCC
Q 020320          217 YDTIGDCKNS--FVVAKDNAPIVDITWPP  243 (327)
Q Consensus       217 ~d~~g~~~~~--~~~l~~~g~~v~~g~~~  243 (327)
                      +.|+.+....  ...++++..+..+|...
T Consensus       188 i~aT~s~~pvl~~~~l~~G~~V~~vGs~~  216 (313)
T 3hdj_A          188 VTATRSTTPLFAGQALRAGAFVGAIGSSL  216 (313)
T ss_dssp             EECCCCSSCSSCGGGCCTTCEEEECCCSS
T ss_pred             EEccCCCCcccCHHHcCCCcEEEECCCCC
Confidence            9998754222  35688888888888643

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=92.88  E-value=0.51  Score=39.90  Aligned_cols=65  Identities=12%  Similarity=0.063  Sum_probs=47.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCC-EEEeCCCCChhhhccCccEEEeCCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGAD-KVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      +|.|+| +|.+|.+.+..+... |.++++.++++++.+.+.+.|.. .+.    .+..+. .++|+++-++..
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~-~~~D~vi~av~~   67 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRR-GHYLIGVSRQQSTCEKAVERQLVDEAG----QDLSLL-QTAKIIFLCTPI   67 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTSCSEEE----SCGGGG-TTCSEEEECSCH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhCCCCcccc----CCHHHh-CCCCEEEEECCH
Confidence            588999 899999988887777 88888888888888777777753 222    122333 678899988873

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=92.82  E-value=0.4  Score=37.57  Aligned_cols=97  Identities=10%  Similarity=0.077  Sum_probs=62.2

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEE--EeCCCCChhhh-ccCc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKV--IDYRKTKYEDI-EEKF  213 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~~-~~~~  213 (327)
                      +....++++++||=.| ||. |..+..+++.  +.+++.++.+++..+.+++    .+.+.+  +......+... ...+
T Consensus        15 ~l~~~~~~~~~vLDiG-cG~-G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~f   90 (185)
T 3mti_A           15 FLAEVLDDESIVVDAT-MGN-GNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPI   90 (185)
T ss_dssp             HHHTTCCTTCEEEESC-CTT-SHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCE
T ss_pred             HHHHhCCCCCEEEEEc-CCC-CHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCc
Confidence            3455678899999888 665 8788888885  7889999999987777643    343322  22111121111 2458


Q ss_pred             cEEEeCCCC------------------chhhhhhhcCCCcEEEeeC
Q 020320          214 DVLYDTIGD------------------CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       214 d~v~d~~g~------------------~~~~~~~l~~~g~~v~~g~  241 (327)
                      |+++-..+.                  ...+.+.|+|+|+++....
T Consensus        91 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           91 RAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             EEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             CEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            988755321                  1345578899999887754

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=92.80  E-value=0.11  Score=42.76  Aligned_cols=37  Identities=19%  Similarity=0.416  Sum_probs=32.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      ++++||+||+|++|.+++..+... |.+++++.+++++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~   39 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKN-GYTVLNIDLSAND   39 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEecCccc
Confidence            578999999999999998888887 9999988887664

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=92.79  E-value=0.43  Score=41.24  Aligned_cols=67  Identities=16%  Similarity=0.119  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      -.+|.|+| +|.+|...+..+... |.++++..+++++.+.+.+.|....     .+..+.....|++|-++..
T Consensus        21 m~~I~iIG-~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~l~~~g~~~~-----~~~~~~~~~aDvvi~~vp~   87 (310)
T 3doj_A           21 MMEVGFLG-LGIMGKAMSMNLLKN-GFKVTVWNRTLSKCDELVEHGASVC-----ESPAEVIKKCKYTIAMLSD   87 (310)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHHHHCSEEEECCSS
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHCCCeEc-----CCHHHHHHhCCEEEEEcCC
Confidence            46899999 999999888877777 8889888899998888877775321     2334445567888888764

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=92.78  E-value=0.13  Score=45.01  Aligned_cols=34  Identities=12%  Similarity=0.164  Sum_probs=28.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      ++++||+|++|++|.+++..+... |++++.+.++
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~-G~~v~~v~r~   35 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASD-PSQSFKVYAT   35 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTC-TTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCceEEEEee
Confidence            578999999999999988888877 8887776644

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=92.71  E-value=0.14  Score=44.84  Aligned_cols=102  Identities=25%  Similarity=0.325  Sum_probs=71.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..++.++.  +++. ++  .    .++.+.+...|+++.++...    
T Consensus       144 ~g~~vgIiG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~--~~~~-~~--~----~~l~ell~~aDvV~~~~P~~~~t~  212 (333)
T 1dxy_A          144 GQQTVGVMG-TGHIGQVAIKLFKGF-GAKVIAYDPYPMKG--DHPD-FD--Y----VSLEDLFKQSDVIDLHVPGIEQNT  212 (333)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCSS--CCTT-CE--E----CCHHHHHHHCSEEEECCCCCGGGT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCcchh--hHhc-cc--c----CCHHHHHhcCCEEEEcCCCchhHH
Confidence            578999999 999999999999998 99999888765543  1111 11  1    13455567899999887632    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..|++++.++.++....          .+   -+.+.+.+++|++.
T Consensus       213 ~li~~~~l~~mk~ga~lIn~srg~~----------vd---~~aL~~aL~~g~i~  253 (333)
T 1dxy_A          213 HIINEAAFNLMKPGAIVINTARPNL----------ID---TQAMLSNLKSGKLA  253 (333)
T ss_dssp             TSBCHHHHHHSCTTEEEEECSCTTS----------BC---HHHHHHHHHTTSEE
T ss_pred             HHhCHHHHhhCCCCcEEEECCCCcc----------cC---HHHHHHHHHhCCcc
Confidence                345678899988888864321          11   24566677788776

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=92.70  E-value=0.18  Score=45.70  Aligned_cols=39  Identities=10%  Similarity=0.203  Sum_probs=32.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      ..++.+|||+||+|.+|..++..+... |.+++++++++.
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~R~~~  104 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGY-SHRIYCFIRADN  104 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTT-EEEEEEEEECSS
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcC-CCEEEEEECCCC
Confidence            345679999999999999988888666 888998888766

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=92.67  E-value=0.46  Score=41.63  Aligned_cols=83  Identities=20%  Similarity=0.126  Sum_probs=56.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-HHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      +.+|.|+| +|.+|.+.+..++.. |.++++..+++++ .+.+++.|... .     +..+....+|+|+-++...    
T Consensus        16 ~~~I~IIG-~G~mG~alA~~L~~~-G~~V~~~~~~~~~~~~~a~~~G~~~-~-----~~~e~~~~aDvVilavp~~~~~~   87 (338)
T 1np3_A           16 GKKVAIIG-YGSQGHAHACNLKDS-GVDVTVGLRSGSATVAKAEAHGLKV-A-----DVKTAVAAADVVMILTPDEFQGR   87 (338)
T ss_dssp             TSCEEEEC-CSHHHHHHHHHHHHT-TCCEEEECCTTCHHHHHHHHTTCEE-E-----CHHHHHHTCSEEEECSCHHHHHH
T ss_pred             CCEEEEEC-chHHHHHHHHHHHHC-cCEEEEEECChHHHHHHHHHCCCEE-c-----cHHHHHhcCCEEEEeCCcHHHHH
Confidence            35799999 899999998888887 8888887777665 67777788642 1     2334456789999888632    


Q ss_pred             --h-hhhhhhcCCCcEEEe
Q 020320          224 --K-NSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 --~-~~~~~l~~~g~~v~~  239 (327)
                        . .....++++..++..
T Consensus        88 v~~~~i~~~l~~~~ivi~~  106 (338)
T 1np3_A           88 LYKEEIEPNLKKGATLAFA  106 (338)
T ss_dssp             HHHHHTGGGCCTTCEEEES
T ss_pred             HHHHHHHhhCCCCCEEEEc
Confidence              2 222345555555533

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=92.67  E-value=0.11  Score=43.68  Aligned_cols=42  Identities=14%  Similarity=0.213  Sum_probs=34.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHh---hcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKH---FYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~---~~g~~~v~~~~~~~~~~~~  190 (327)
                      .++++||+||+|++|.+++..+..   . |++++++.+++++.+.+
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~-G~~V~~~~r~~~~~~~~   49 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSP-GSVMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCT-TCEEEEEESCHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcC-CCeEEEEeCCHHHHHHH
Confidence            467899999999999998877776   6 89999998887765443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=92.60  E-value=0.22  Score=46.37  Aligned_cols=75  Identities=20%  Similarity=0.359  Sum_probs=47.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcc---c-HHHH---HHcCCCEEE-eCCCCCh---hhhc--c
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTP---K-VEFV---KELGADKVI-DYRKTKY---EDIE--E  211 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~---~-~~~~---~~~g~~~v~-~~~~~~~---~~~~--~  211 (327)
                      ++++.++||+||+|.+|..++..+... |.+ ++.+.++..   + .++.   +..|....+ ..+-.+.   ....  .
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~-G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~  334 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAE-GAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAY  334 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHT-TCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhC-CCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcC
Confidence            567899999999999999988877776 875 666666643   1 2222   334543222 1111222   1222  3


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      .+|.+|++.|
T Consensus       335 ~ld~VVh~AG  344 (511)
T 2z5l_A          335 PPNAVFHTAG  344 (511)
T ss_dssp             CCSEEEECCC
T ss_pred             CCcEEEECCc
Confidence            5999999988

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=92.56  E-value=0.54  Score=38.18  Aligned_cols=70  Identities=17%  Similarity=0.090  Sum_probs=51.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCCChh---h-hccCccEEEeCCCCc
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKTKYE---D-IEEKFDVLYDTIGDC  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~---~-~~~~~d~v~d~~g~~  223 (327)
                      +|+|+| +|.+|...+..+... |..++++++++++.+.+. +.+.. ++..+..+..   . ...++|.++-+++..
T Consensus         2 ~iiIiG-~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIG-GETTAYYLARSMLSR-KYGVVIINKDRELCEEFAKKLKAT-IIHGDGSHKEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEEC-CHHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHHSSSE-EEESCTTSHHHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHcCCe-EEEcCCCCHHHHHhcCcccCCEEEEecCCc
Confidence            589999 799999999988887 999999999988877654 46654 3433333322   1 246899999998854

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=92.56  E-value=0.17  Score=44.37  Aligned_cols=102  Identities=23%  Similarity=0.270  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...++.++.+ |.++++..++.++.  +++. ..  .    .++.+.+...|+++.++...    
T Consensus       145 ~g~~vgIiG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~--~~~~-~~--~----~~l~ell~~aDvV~~~~p~t~~t~  213 (331)
T 1xdw_A          145 RNCTVGVVG-LGRIGRVAAQIFHGM-GATVIGEDVFEIKG--IEDY-CT--Q----VSLDEVLEKSDIITIHAPYIKENG  213 (331)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCCS--CTTT-CE--E----CCHHHHHHHCSEEEECCCCCTTTC
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCccHH--HHhc-cc--c----CCHHHHHhhCCEEEEecCCchHHH
Confidence            477999999 999999999999988 99998888765543  1111 11  1    13455567889999886521    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..|+++..++.++-..          ..+   -+.+.+.+++|++.
T Consensus       214 ~li~~~~l~~mk~ga~lin~srg~----------~vd---~~aL~~aL~~g~i~  254 (331)
T 1xdw_A          214 AVVTRDFLKKMKDGAILVNCARGQ----------LVD---TEAVIEAVESGKLG  254 (331)
T ss_dssp             CSBCHHHHHTSCTTEEEEECSCGG----------GBC---HHHHHHHHHHTSEE
T ss_pred             HHhCHHHHhhCCCCcEEEECCCcc----------ccc---HHHHHHHHHhCCce
Confidence                34667788888888876221          112   24566677788876

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=92.54  E-value=0.28  Score=45.42  Aligned_cols=75  Identities=24%  Similarity=0.413  Sum_probs=47.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcc---c-HH---HHHHcCCCEE-EeCCCCChh---hhc---
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTP---K-VE---FVKELGADKV-IDYRKTKYE---DIE---  210 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~---~-~~---~~~~~g~~~v-~~~~~~~~~---~~~---  210 (327)
                      ++++.++||+||+|++|..++..+... |.+ ++.+.++..   + .+   .+++.|.... +..+-.+..   ...   
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~-G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARR-GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHH-TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHc-CCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            568899999999999999988877777 875 666667653   1 12   2344554322 211212211   111   


Q ss_pred             ---cCccEEEeCCC
Q 020320          211 ---EKFDVLYDTIG  221 (327)
Q Consensus       211 ---~~~d~v~d~~g  221 (327)
                         ..+|.+|.+.|
T Consensus       302 ~~~g~ld~VIh~AG  315 (486)
T 2fr1_A          302 GDDVPLSAVFHAAA  315 (486)
T ss_dssp             CTTSCEEEEEECCC
T ss_pred             HhcCCCcEEEECCc
Confidence               24699999988

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=92.54  E-value=0.42  Score=40.88  Aligned_cols=83  Identities=22%  Similarity=0.263  Sum_probs=56.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---hhh
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---KNS  226 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~~~  226 (327)
                      .+|.|+| +|.+|...+..+... |.++++.++++++.+.+.+.|...     ..+..+...++|+|+.++...   ...
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~~~D~vi~~v~~~~~~~~~   78 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKA-GYSLVVSDRNPEAIADVIAAGAET-----ASTAKAIAEQCDVIITMLPNSPHVKEV   78 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEE-----CSSHHHHHHHCSEEEECCSSHHHHHHH
T ss_pred             ceEEEEC-chHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHCCCee-----cCCHHHHHhCCCEEEEECCCHHHHHHH
Confidence            3799999 899999888877776 888887778888877776666421     122334455789999998742   222


Q ss_pred             h-------hhhcCCCcEEEe
Q 020320          227 F-------VVAKDNAPIVDI  239 (327)
Q Consensus       227 ~-------~~l~~~g~~v~~  239 (327)
                      +       ..++++..++.+
T Consensus        79 ~~~~~~l~~~l~~~~~vv~~   98 (299)
T 1vpd_A           79 ALGENGIIEGAKPGTVLIDM   98 (299)
T ss_dssp             HHSTTCHHHHCCTTCEEEEC
T ss_pred             HhCcchHhhcCCCCCEEEEC
Confidence            2       345666666555

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=92.54  E-value=0.34  Score=41.29  Aligned_cols=93  Identities=16%  Similarity=0.124  Sum_probs=61.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC---EEEeCCCCChhhhccCccEEE
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD---KVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      .+.++.+||-+| || .|..+..+++.. +.+++.++.++...+.+++    .|..   .++..+-.........+|+|+
T Consensus        79 ~~~~~~~vLDiG-cG-~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~  155 (297)
T 2o57_A           79 VLQRQAKGLDLG-AG-YGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIW  155 (297)
T ss_dssp             CCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEE
T ss_pred             CCCCCCEEEEeC-CC-CCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEE
Confidence            788999999998 66 677888888887 8889999999887766644    3321   122221111111123589988


Q ss_pred             eCCC-----C----chhhhhhhcCCCcEEEee
Q 020320          218 DTIG-----D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       218 d~~g-----~----~~~~~~~l~~~g~~v~~g  240 (327)
                      ....     .    +..+.+.|+|+|.++...
T Consensus       156 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  187 (297)
T 2o57_A          156 SQDAFLHSPDKLKVFQECARVLKPRGVMAITD  187 (297)
T ss_dssp             EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            5432     1    245668899999998764

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=92.53  E-value=0.33  Score=38.04  Aligned_cols=95  Identities=14%  Similarity=0.069  Sum_probs=61.4

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCC-CEEEeCCCCChhh---hccC
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGA-DKVIDYRKTKYED---IEEK  212 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~---~~~~  212 (327)
                      +....+.++++||-.| ||. |..+..+++.  +.+++.++.+++..+.+++    .+. +.+ .....+...   ....
T Consensus        26 ~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~  100 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVG-CGT-GGVTLELAGR--VRRVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEGDAPEALCKIPD  100 (192)
T ss_dssp             HHHHCCCTTCEEEEES-CTT-SHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEESCHHHHHTTSCC
T ss_pred             HHhcCCCCCCEEEEEC-CCC-CHHHHHHHHh--cCEEEEEECCHHHHHHHHHHHHHcCCCcce-EEEecCHHHhcccCCC
Confidence            3456788999999999 776 8888888885  4678888888887777754    443 221 111122222   1146


Q ss_pred             ccEEEeCCC--Cc----hhhhhhhcCCCcEEEee
Q 020320          213 FDVLYDTIG--DC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       213 ~d~v~d~~g--~~----~~~~~~l~~~g~~v~~g  240 (327)
                      +|+++....  ..    ..+.+.|+++|.++...
T Consensus       101 ~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A          101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            899985533  22    45567889999887653

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=92.52  E-value=0.4  Score=39.82  Aligned_cols=99  Identities=10%  Similarity=0.040  Sum_probs=65.7

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC-CEEEeCCCCChhhhccCccEEE
Q 020320          139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA-DKVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      ..+......++.+||-+| || .|..+..+++...+.+++.++.++...+.+++... -..+..+...+. ....+|+|+
T Consensus        24 ~l~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~  100 (259)
T 2p35_A           24 DLLAQVPLERVLNGYDLG-CG-PGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLY  100 (259)
T ss_dssp             HHHTTCCCSCCSSEEEET-CT-TTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEE
T ss_pred             HHHHhcCCCCCCEEEEec-Cc-CCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEE
Confidence            344566778889999998 66 57777778877656789999999998888876432 122222222222 234689998


Q ss_pred             eCCC-----C----chhhhhhhcCCCcEEEee
Q 020320          218 DTIG-----D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       218 d~~g-----~----~~~~~~~l~~~g~~v~~g  240 (327)
                      ....     .    +..+.+.|+++|.++...
T Consensus       101 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A          101 ANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             EESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence            6442     1    144568899999988764

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=92.52  E-value=0.24  Score=42.03  Aligned_cols=87  Identities=22%  Similarity=0.338  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCCCCch--
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCK--  224 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--  224 (327)
                      .+.+++|+| +|.+|.+.+..+... |.++.+..+++++.+.+ +++|.+ +.    .+..+....+|+++.+++...  
T Consensus       128 ~~~~v~iiG-aG~~g~aia~~L~~~-g~~V~v~~r~~~~~~~l~~~~g~~-~~----~~~~~~~~~aDiVi~atp~~~~~  200 (275)
T 2hk9_A          128 KEKSILVLG-AGGASRAVIYALVKE-GAKVFLWNRTKEKAIKLAQKFPLE-VV----NSPEEVIDKVQVIVNTTSVGLKD  200 (275)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSSHHHHHHHTTTSCEE-EC----SCGGGTGGGCSEEEECSSTTSST
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHcCCe-ee----hhHHhhhcCCCEEEEeCCCCCCC
Confidence            568999999 799999998888888 77776666777665433 445532 11    133445568999999986321  


Q ss_pred             ---hh--hhhhcCCCcEEEeeC
Q 020320          225 ---NS--FVVAKDNAPIVDITW  241 (327)
Q Consensus       225 ---~~--~~~l~~~g~~v~~g~  241 (327)
                         ..  ...++++..++.+..
T Consensus       201 ~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          201 EDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             TCCCSSCGGGCCTTSEEEESSS
T ss_pred             CCCCCCCHHHcCCCCEEEEcCC
Confidence               11  234566666655543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=92.50  E-value=0.059  Score=46.53  Aligned_cols=69  Identities=25%  Similarity=0.316  Sum_probs=42.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHHHHcCCCEE-EeCCCCChhhhccCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFVKELGADKV-IDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      ++|||+||+|.+|..++..+... | .++++++ ++.+.+.+ ..+...+ .|-.+..+.+...++|.++.+++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~-g-~~v~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~   72 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSES-N-EIVVIDNLSSGNEEFV-NEAARLVKADLAADDIKDYLKGAEEVWHIAA   72 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTT-S-CEEEECCCSSCCGGGS-CTTEEEECCCTTTSCCHHHHTTCSEEEECCC
T ss_pred             CEEEEECCCchHHHHHHHHHHhC-C-CEEEEEcCCCCChhhc-CCCcEEEECcCChHHHHHHhcCCCEEEECCC
Confidence            36999999999999999988887 7 5555553 33332221 1111111 12222444455678999999887

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=92.46  E-value=0.36  Score=41.10  Aligned_cols=65  Identities=18%  Similarity=0.185  Sum_probs=48.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      +|.|+| +|.+|...+..+... |.++++..+++++.+.+.+.|....     .+..+.....|+++-++..
T Consensus         3 ~I~iiG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~~~~~~advvi~~v~~   67 (287)
T 3pdu_A            3 TYGFLG-LGIMGGPMAANLVRA-GFDVTVWNRNPAKCAPLVALGARQA-----SSPAEVCAACDITIAMLAD   67 (287)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHHH-TCCEEEECSSGGGGHHHHHHTCEEC-----SCHHHHHHHCSEEEECCSS
T ss_pred             eEEEEc-cCHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHCCCeec-----CCHHHHHHcCCEEEEEcCC
Confidence            588998 999999887777777 8899999999998887777665321     2334444567888888764

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=92.40  E-value=0.2  Score=43.72  Aligned_cols=71  Identities=23%  Similarity=0.274  Sum_probs=44.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHHc-C-CC-EEEeCCCCChhhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKEL-G-AD-KVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~~-g-~~-~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      .+.+|||+||+|.+|..++..+... |.++++++++.... +.++.+ + .. .++..+-.  .....++|+||.+++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~d~vih~A~  100 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMD-GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV--EPLYIEVDQIYHLAS  100 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTT--SCCCCCCSEEEECCS
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHC-CCEEEEEeCCCccchhhhhhhccCCceEEEeCccC--ChhhcCCCEEEECcc
Confidence            4678999999999999998888877 88888888754321 111111 1 11 12211111  112457999999987

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=92.39  E-value=1.5  Score=38.34  Aligned_cols=108  Identities=6%  Similarity=-0.067  Sum_probs=66.2

Q ss_pred             EEEEEcCCchHHH-HHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC--CEEEeCCCCChhhhc--cCccEEEeCCCCc--
Q 020320          151 TIFIVGGAGGVGT-LVIQLAKHFYGASHVVATTSTPKVEFVKELGA--DKVIDYRKTKYEDIE--EKFDVLYDTIGDC--  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~-~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~--~~~d~v~d~~g~~--  223 (327)
                      +|.|+| +|.+|. ..+..++...+.+++.+.......+++++++.  ..+.    .++.+.+  ..+|+|+.++...  
T Consensus         4 rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~----~~~~~ll~~~~~D~V~i~tp~~~h   78 (349)
T 3i23_A            4 KMGFIG-FGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFT----ADLNELLTDPEIELITICTPAHTH   78 (349)
T ss_dssp             EEEEEC-CSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEE----SCTHHHHSCTTCCEEEECSCGGGH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEE----CCHHHHhcCCCCCEEEEeCCcHHH
Confidence            688999 899997 56665555546777766644455666666532  1222    1234444  3599999998743  


Q ss_pred             -hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCcee
Q 020320          224 -KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKA  274 (327)
Q Consensus       224 -~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~  274 (327)
                       ..+..+++.| +-+.+..+.          ..+.+..++++++.++.....
T Consensus        79 ~~~~~~al~aG-k~Vl~EKP~----------a~~~~e~~~l~~~a~~~g~~~  119 (349)
T 3i23_A           79 YDLAKQAILAG-KSVIVEKPF----------CDTLEHAEELFALGQEKGVVV  119 (349)
T ss_dssp             HHHHHHHHHTT-CEEEECSCS----------CSSHHHHHHHHHHHHHTTCCE
T ss_pred             HHHHHHHHHcC-CEEEEECCC----------cCCHHHHHHHHHHHHHcCCeE
Confidence             4556677765 444554432          234566777777777665544

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=92.34  E-value=0.86  Score=40.48  Aligned_cols=36  Identities=19%  Similarity=0.332  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH-hhcCCcEEEEeCCcc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAK-HFYGASHVVATTSTP  185 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~-~~~g~~~v~~~~~~~  185 (327)
                      +.+|||+||+|.+|..++..+. .. |.++++++++..
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~   38 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDT-NHSVVIVDSLVG   38 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHC-CCEEEEEECCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhC-CCEEEEEecCCc
Confidence            3589999999999999888777 77 888888886543

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=92.31  E-value=3.6  Score=35.49  Aligned_cols=106  Identities=16%  Similarity=0.168  Sum_probs=64.1

Q ss_pred             EEEEEcCCchHHHHH-HHHHHhhcCCcEEEEe-CCcccHH-HHHHcCCCEEEeCCCCChhhhcc--CccEEEeCCCCc--
Q 020320          151 TIFIVGGAGGVGTLV-IQLAKHFYGASHVVAT-TSTPKVE-FVKELGADKVIDYRKTKYEDIEE--KFDVLYDTIGDC--  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a-~~la~~~~g~~~v~~~-~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~--~~d~v~d~~g~~--  223 (327)
                      +|.|+| +|.+|... +..++.. +.+++.+. +++++.+ .++++|...+.    .++.+.+.  ++|+|+.++...  
T Consensus         2 ~vgiiG-~G~~g~~~~~~~l~~~-~~~~vav~d~~~~~~~~~~~~~g~~~~~----~~~~~~l~~~~~D~V~i~tp~~~h   75 (332)
T 2glx_A            2 RWGLIG-ASTIAREWVIGAIRAT-GGEVVSMMSTSAERGAAYATENGIGKSV----TSVEELVGDPDVDAVYVSTTNELH   75 (332)
T ss_dssp             EEEEES-CCHHHHHTHHHHHHHT-TCEEEEEECSCHHHHHHHHHHTTCSCCB----SCHHHHHTCTTCCEEEECSCGGGH
T ss_pred             eEEEEc-ccHHHHHhhhHHhhcC-CCeEEEEECCCHHHHHHHHHHcCCCccc----CCHHHHhcCCCCCEEEEeCChhHh
Confidence            588999 89999875 5444444 88877554 5665554 45667754222    23444443  699999998743  


Q ss_pred             -hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 -KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 -~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                       ..+..+++.+ +-+.+..+.          ..+.+..+++.++.++....
T Consensus        76 ~~~~~~al~~G-k~v~~ekP~----------~~~~~~~~~l~~~a~~~g~~  115 (332)
T 2glx_A           76 REQTLAAIRAG-KHVLCEKPL----------AMTLEDAREMVVAAREAGVV  115 (332)
T ss_dssp             HHHHHHHHHTT-CEEEECSSS----------CSSHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHCC-CeEEEeCCC----------cCCHHHHHHHHHHHHHcCCE
Confidence             4455667765 444443322          23456667777777654443

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=92.26  E-value=1.7  Score=37.19  Aligned_cols=95  Identities=15%  Similarity=0.215  Sum_probs=64.9

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      +.|++....+..++..++ -.|++++|.|.+..+|.=.+.++... ++.+.+.                   .++..+..
T Consensus       158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~-~ATVTi~-------------------Hs~T~dl~  217 (303)
T 4b4u_A          158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQA-NATVTIC-------------------HSRTQNLP  217 (303)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEE-------------------CTTCSSHH
T ss_pred             ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHhc-CCEEEEe-------------------cCCCCCHH
Confidence            345554444445555443 47999999999999998888888876 7755432                   22233444


Q ss_pred             hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320          208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~  243 (327)
                      +..+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus       218 ~~~~~ADIvV~A~G~p~~i~~d~vk~GavVIDVGin~  254 (303)
T 4b4u_A          218 ELVKQADIIVGAVGKAELIQKDWIKQGAVVVDAGFHP  254 (303)
T ss_dssp             HHHHTCSEEEECSCSTTCBCGGGSCTTCEEEECCCBC
T ss_pred             HHhhcCCeEEeccCCCCccccccccCCCEEEEeceec
Confidence            55567899999999663 2345788999999998654

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=92.24  E-value=0.22  Score=43.24  Aligned_cols=85  Identities=13%  Similarity=0.239  Sum_probs=56.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHh-hcCCcEEEEe-CCccc--HHHHHHcCCCEEEeCCCCChhhh-----ccCccEEEeCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKH-FYGASHVVAT-TSTPK--VEFVKELGADKVIDYRKTKYEDI-----EEKFDVLYDTI  220 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~-~~g~~~v~~~-~~~~~--~~~~~~~g~~~v~~~~~~~~~~~-----~~~~d~v~d~~  220 (327)
                      -+|.|+| +|.+|...+..+.. ..+.+++.+. .++++  ...++++|.... .   .+....     ..++|+||+++
T Consensus         5 irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~-~---~~~e~ll~~~~~~~iDvV~~at   79 (312)
T 1nvm_B            5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT-Y---AGVEGLIKLPEFADIDFVFDAT   79 (312)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE-S---SHHHHHHHSGGGGGEEEEEECS
T ss_pred             CEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc-c---CCHHHHHhccCCCCCcEEEECC
Confidence            4789999 89999988887744 4366666555 45555  566778886532 1   122222     14689999999


Q ss_pred             CCc---hhhhhhhcC--CCcEEEe
Q 020320          221 GDC---KNSFVVAKD--NAPIVDI  239 (327)
Q Consensus       221 g~~---~~~~~~l~~--~g~~v~~  239 (327)
                      +..   ..+..+++.  |..++..
T Consensus        80 p~~~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           80 SASAHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             CHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             ChHHHHHHHHHHHHhCCCCEEEEc
Confidence            932   455667776  7776663

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=92.20  E-value=0.68  Score=40.18  Aligned_cols=72  Identities=18%  Similarity=0.260  Sum_probs=44.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc--ccHHHHH---HcCCCEEEeCCCCC---hhhhccC--ccEEEeC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST--PKVEFVK---ELGADKVIDYRKTK---YEDIEEK--FDVLYDT  219 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~--~~~~~~~---~~g~~~v~~~~~~~---~~~~~~~--~d~v~d~  219 (327)
                      .+|||+||+|.+|..++..+... |.++++++++.  .....+.   ..+.-..+..+-.+   +.....+  +|+||.+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhC-CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            37999999999999998888877 88888887642  1112222   22311222222122   2233345  9999999


Q ss_pred             CCC
Q 020320          220 IGD  222 (327)
Q Consensus       220 ~g~  222 (327)
                      ++.
T Consensus        81 A~~   83 (347)
T 1orr_A           81 AGQ   83 (347)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            873

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=92.18  E-value=0.073  Score=46.31  Aligned_cols=84  Identities=15%  Similarity=0.226  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|.++.|+| .|.+|...++.++.+ |.++++..++++..+     +......  ..++.+.+...|+++-++...    
T Consensus       138 ~g~tvGIiG-~G~IG~~vA~~l~~~-G~~V~~~dr~~~~~~-----~~~~~~~--~~~l~ell~~aDiV~l~~Plt~~t~  208 (315)
T 3pp8_A          138 EEFSVGIMG-AGVLGAKVAESLQAW-GFPLRCWSRSRKSWP-----GVESYVG--REELRAFLNQTRVLINLLPNTAQTV  208 (315)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHTT-TCCEEEEESSCCCCT-----TCEEEES--HHHHHHHHHTCSEEEECCCCCGGGT
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEEcCCchhhh-----hhhhhcc--cCCHHHHHhhCCEEEEecCCchhhh
Confidence            488999999 999999999999998 999999987765321     1111110  122344456778888776521    


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          ...+..|+++..++.++
T Consensus       209 ~li~~~~l~~mk~gailIN~a  229 (315)
T 3pp8_A          209 GIINSELLDQLPDGAYVLNLA  229 (315)
T ss_dssp             TCBSHHHHTTSCTTEEEEECS
T ss_pred             hhccHHHHhhCCCCCEEEECC
Confidence                34456677777777665

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=92.16  E-value=0.16  Score=42.31  Aligned_cols=69  Identities=17%  Similarity=0.301  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC-hhhh-------ccCccEEEeC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK-YEDI-------EEKFDVLYDT  219 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~-------~~~~d~v~d~  219 (327)
                      .++++||+||+|++|.+++..+... |.+++++.+++++.+.+.  +  ...|-.+.+ ....       ..++|+++++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~--~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAAD-GHKVAVTHRGSGAPKGLF--G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCTTSE--E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHhc--C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4789999999999999988888877 999998888765433211  1  112222211 1111       1368999998


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      +|
T Consensus        89 Ag   90 (247)
T 1uzm_A           89 AG   90 (247)
T ss_dssp             CS
T ss_pred             CC
Confidence            87

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=92.14  E-value=0.39  Score=40.59  Aligned_cols=96  Identities=14%  Similarity=0.163  Sum_probs=61.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhh-cCCcEEEEeCCcccHHHHHHc-----CCCEE--EeCCCCChhhhccCc
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHF-YGASHVVATTSTPKVEFVKEL-----GADKV--IDYRKTKYEDIEEKF  213 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~-~g~~~v~~~~~~~~~~~~~~~-----g~~~v--~~~~~~~~~~~~~~~  213 (327)
                      ....+.++++||-.| || .|..+..+++.. .+.+++.++.+++..+.+++.     |.+.+  +..+..+. .....+
T Consensus       104 ~~~~~~~~~~VLD~G-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-~~~~~f  180 (275)
T 1yb2_A          104 MRCGLRPGMDILEVG-VG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF-ISDQMY  180 (275)
T ss_dssp             --CCCCTTCEEEEEC-CT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC-CCSCCE
T ss_pred             HHcCCCCcCEEEEec-CC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc-CcCCCc
Confidence            456788999999998 66 577777888863 256788888888887777542     53322  21111110 011358


Q ss_pred             cEEEeCCCCc----hhhhhhhcCCCcEEEee
Q 020320          214 DVLYDTIGDC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       214 d~v~d~~g~~----~~~~~~l~~~g~~v~~g  240 (327)
                      |+++......    ..+.+.|+++|.++...
T Consensus       181 D~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          181 DAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             EEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             cEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            9999655432    55677899999988764

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=92.14  E-value=0.73  Score=40.09  Aligned_cols=73  Identities=18%  Similarity=0.242  Sum_probs=45.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc----------cHHHHHH-cCCC-EEEeCCCCC---hhhhcc--
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP----------KVEFVKE-LGAD-KVIDYRKTK---YEDIEE--  211 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~----------~~~~~~~-~g~~-~v~~~~~~~---~~~~~~--  211 (327)
                      +++|||+||+|.+|..++..+... |.++++++++..          ..+.+++ .+.. ..+..+-.+   +.....  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEA-GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHT-TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence            468999999999999988888777 889998876432          2222222 2321 222222122   222334  


Q ss_pred             CccEEEeCCCC
Q 020320          212 KFDVLYDTIGD  222 (327)
Q Consensus       212 ~~d~v~d~~g~  222 (327)
                      ++|+||.+++.
T Consensus        81 ~~d~vih~A~~   91 (348)
T 1ek6_A           81 SFMAVIHFAGL   91 (348)
T ss_dssp             CEEEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=92.13  E-value=0.54  Score=39.97  Aligned_cols=65  Identities=12%  Similarity=0.178  Sum_probs=47.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      .+|.|+|++|.+|...+..+... |.++++..+++++.+.+.+.|.+.  .    +..+....+|++|.++.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~g~~~--~----~~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDS-AHHLAAIEIAPEGRDRLQGMGIPL--T----DGDGWIDEADVVVLALP   76 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSHHHHHHHHHTTCCC--C----CSSGGGGTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHhcCCCc--C----CHHHHhcCCCEEEEcCC
Confidence            47999993399999988887776 888888888888877777776432  1    22234457888888876

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=92.12  E-value=0.36  Score=39.76  Aligned_cols=98  Identities=15%  Similarity=0.219  Sum_probs=63.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCE--EEeCCCCChhhhccCc
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADK--VIDYRKTKYEDIEEKF  213 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~  213 (327)
                      .+...+++++.+||=+| ||. |..+..+++.  +.+++.++.++...+.+++    .+...  ++..+...+......+
T Consensus        13 ~~~~~~~~~~~~vLDiG-cG~-G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~f   88 (239)
T 1xxl_A           13 MIKTAECRAEHRVLDIG-AGA-GHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSF   88 (239)
T ss_dssp             HHHHHTCCTTCEEEEES-CTT-SHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCE
T ss_pred             HHHHhCcCCCCEEEEEc-cCc-CHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcE
Confidence            44667888999999998 666 7777777775  5588888888887766643    34322  1222212111112468


Q ss_pred             cEEEeCCC-----C----chhhhhhhcCCCcEEEeeC
Q 020320          214 DVLYDTIG-----D----CKNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       214 d~v~d~~g-----~----~~~~~~~l~~~g~~v~~g~  241 (327)
                      |+|+....     .    +..+.+.|+++|.++....
T Consensus        89 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  125 (239)
T 1xxl_A           89 DIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  125 (239)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            99985532     1    1456688999999988653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=92.12  E-value=0.26  Score=39.39  Aligned_cols=68  Identities=19%  Similarity=0.352  Sum_probs=42.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChh---hhcc---CccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYE---DIEE---KFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~---~~~~---~~d~v~d~~g  221 (327)
                      ++++|+||+|.+|...+..+..  . +++++.+++++.+.+ ++++. ..+..+-.+..   ....   ++|+++.++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~--~-~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   75 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKG--H-DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVG   75 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTT--S-EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHh--C-CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            3689999999999987776654  2 677777877665544 33433 33222222222   2223   7999999987

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=92.07  E-value=0.26  Score=43.87  Aligned_cols=105  Identities=14%  Similarity=0.169  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCc-------c-----cHHHHHHcCCCEE
Q 020320          133 AVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTST-------P-----KVEFVKELGADKV  198 (327)
Q Consensus       133 ~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~-------~-----~~~~~~~~g~~~v  198 (327)
                      .+..-+.+++..+ --..-+|+|.| +|..|..++.++..+ |+ ++++.+++-       +     +..++++-.    
T Consensus       171 ~lAall~al~l~g~~l~d~kVVi~G-AGaAG~~iA~ll~~~-Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~----  244 (398)
T 2a9f_A          171 VLAAIFNSLKLLKKSLDEVSIVVNG-GGSAGLSITRKLLAA-GATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTN----  244 (398)
T ss_dssp             HHHHHHHHHHTTTCCTTSCEEEEEC-CSHHHHHHHHHHHHH-TCCEEEEEETTEECCTTCCCSCCC---CHHHHHS----
T ss_pred             HHHHHHHHHHHhCCCCCccEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEECCCcccCCccccchHHHHHHhhccC----
Confidence            3333455565433 33456889999 899999999999999 88 677776541       1     122222211    


Q ss_pred             EeCCCCChhhhccCccEEEeCCC-Cc--hhhhhhhcCCCcEEEeeCCC
Q 020320          199 IDYRKTKYEDIEEKFDVLYDTIG-DC--KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       199 ~~~~~~~~~~~~~~~d~v~d~~g-~~--~~~~~~l~~~g~~v~~g~~~  243 (327)
                      .......+.+.++++|+++-+++ ..  ...++.|+++-.++.+..+.
T Consensus       245 ~~~~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt  292 (398)
T 2a9f_A          245 REFKSGTLEDALEGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPI  292 (398)
T ss_dssp             CTTCCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSS
T ss_pred             cccchhhHHHHhccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCC
Confidence            01122345556678899997765 22  66778888877777776543

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=92.05  E-value=0.31  Score=39.63  Aligned_cols=67  Identities=13%  Similarity=0.110  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      ...+|.|+| +|.+|.+.+..+... |.++++..+++++.+.+.+.|....      +..+...++|+++.++..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~g~~~~------~~~~~~~~~DvVi~av~~   93 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGS-GFKVVVGSRNPKRTARLFPSAAQVT------FQEEAVSSPEVIFVAVFR   93 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESSHHHHHHHSBTTSEEE------EHHHHTTSCSEEEECSCG
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcee------cHHHHHhCCCEEEECCCh
Confidence            346799999 999999988877777 8888888888777665544443321      244455789999999873

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=92.03  E-value=0.4  Score=38.49  Aligned_cols=93  Identities=13%  Similarity=0.026  Sum_probs=58.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc-CC---------------C--EEEeCCC
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL-GA---------------D--KVIDYRK  203 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~-g~---------------~--~v~~~~~  203 (327)
                      ....+.++.+||-.| ||. |..+..+++.  |.+++.++.+++..+.+++. +.               .  ..+..+-
T Consensus        16 ~~l~~~~~~~vLD~G-CG~-G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~   91 (203)
T 1pjz_A           16 SSLNVVPGARVLVPL-CGK-SQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   91 (203)
T ss_dssp             HHHCCCTTCEEEETT-TCC-SHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HhcccCCCCEEEEeC-CCC-cHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence            445667889999998 665 5666777774  88999999999988887542 21               1  1121121


Q ss_pred             CChhhh-ccCccEEEeCCC--Cc---------hhhhhhhcCCCcEEE
Q 020320          204 TKYEDI-EEKFDVLYDTIG--DC---------KNSFVVAKDNAPIVD  238 (327)
Q Consensus       204 ~~~~~~-~~~~d~v~d~~g--~~---------~~~~~~l~~~g~~v~  238 (327)
                      .++... ...+|+|++...  ..         ..+.+.|+|+|+++.
T Consensus        92 ~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l  138 (203)
T 1pjz_A           92 FALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL  138 (203)
T ss_dssp             SSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred             ccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence            222211 146999997432  11         335678999998433

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=92.01  E-value=0.43  Score=39.97  Aligned_cols=98  Identities=12%  Similarity=0.065  Sum_probs=63.5

Q ss_pred             HHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC---EEEeCCCCChhhhcc
Q 020320          140 GFKTA-GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD---KVIDYRKTKYEDIEE  211 (327)
Q Consensus       140 ~l~~~-~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~  211 (327)
                      .+... .+.++.+||=+| ||. |..+..+++. ++.+++.++.++...+.+++    .|..   .++..+-.++.....
T Consensus        37 ~l~~l~~~~~~~~vLDiG-cG~-G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~  113 (267)
T 3kkz_A           37 ALSFIDNLTEKSLIADIG-CGT-GGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNE  113 (267)
T ss_dssp             HHTTCCCCCTTCEEEEET-CTT-CHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred             HHHhcccCCCCCEEEEeC-CCC-CHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCC
Confidence            44433 478899999998 664 8888888887 37789999999887777644    3432   122222222211124


Q ss_pred             CccEEEeCCC----C----chhhhhhhcCCCcEEEee
Q 020320          212 KFDVLYDTIG----D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       212 ~~d~v~d~~g----~----~~~~~~~l~~~g~~v~~g  240 (327)
                      .+|+|+....    .    ...+.+.|+|+|.++...
T Consensus       114 ~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  150 (267)
T 3kkz_A          114 ELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE  150 (267)
T ss_dssp             CEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence            6899985432    1    145668899999988764

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=91.98  E-value=0.45  Score=39.79  Aligned_cols=90  Identities=12%  Similarity=0.056  Sum_probs=58.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCC---------------------C-EEEeCC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGA---------------------D-KVIDYR  202 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~---------------------~-~v~~~~  202 (327)
                      ..++.+||..| ||. |..+..+++.  |.+++.++.++...+.+++ .+.                     . ..+..+
T Consensus        66 ~~~~~~vLD~G-CG~-G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  141 (252)
T 2gb4_A           66 GQSGLRVFFPL-CGK-AIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS  141 (252)
T ss_dssp             TCCSCEEEETT-CTT-CTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred             CCCCCeEEEeC-CCC-cHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence            46788999998 765 7777778874  8899999999998888753 321                     1 112222


Q ss_pred             CCChhhh-ccCccEEEeCCC--Cc---------hhhhhhhcCCCcEEEe
Q 020320          203 KTKYEDI-EEKFDVLYDTIG--DC---------KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       203 ~~~~~~~-~~~~d~v~d~~g--~~---------~~~~~~l~~~g~~v~~  239 (327)
                      -.++... ...+|+|++..-  .+         ..+.+.|+|+|+++..
T Consensus       142 ~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          142 IFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             TTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            2222222 156999997532  11         2355789999998644

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=91.96  E-value=0.2  Score=41.40  Aligned_cols=94  Identities=9%  Similarity=0.066  Sum_probs=60.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cCCCE-E--EeCCCCChhhhc------
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LGADK-V--IDYRKTKYEDIE------  210 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g~~~-v--~~~~~~~~~~~~------  210 (327)
                      ...++++||-+| || .|..+..+++... +.+++.++.+++..+.+++    .|.+. +  +..+........      
T Consensus        57 ~~~~~~~VLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~  134 (239)
T 2hnk_A           57 KISGAKRIIEIG-TF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSA  134 (239)
T ss_dssp             HHHTCSEEEEEC-CT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSC
T ss_pred             HhhCcCEEEEEe-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccc
Confidence            345788999998 66 5888889998763 4678888888887777654    35432 1  221111111111      


Q ss_pred             -----------cCccEEEeCCCCc------hhhhhhhcCCCcEEEee
Q 020320          211 -----------EKFDVLYDTIGDC------KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       211 -----------~~~d~v~d~~g~~------~~~~~~l~~~g~~v~~g  240 (327)
                                 ..+|+++...+..      ..+.+.|+++|.++...
T Consensus       135 ~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          135 PSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             CGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                       4689999665421      55678899999988753

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=91.96  E-value=0.26  Score=41.11  Aligned_cols=95  Identities=14%  Similarity=0.217  Sum_probs=61.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCE--EEeCCCCChhhhccCccE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADK--VIDYRKTKYEDIEEKFDV  215 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~d~  215 (327)
                      ......++.+||-+| || .|..+..+++.  +.+++.++.+++..+.+++    .+...  .+..+...+......+|+
T Consensus        31 ~~l~~~~~~~vLDiG-cG-~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~  106 (260)
T 1vl5_A           31 QIAALKGNEEVLDVA-TG-GGHVANAFAPF--VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHI  106 (260)
T ss_dssp             HHHTCCSCCEEEEET-CT-TCHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEE
T ss_pred             HHhCCCCCCEEEEEe-CC-CCHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEE
Confidence            345667899999998 76 67777777775  4588888889887777654    23222  122221211111246899


Q ss_pred             EEeCCCC---------chhhhhhhcCCCcEEEee
Q 020320          216 LYDTIGD---------CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       216 v~d~~g~---------~~~~~~~l~~~g~~v~~g  240 (327)
                      |+....-         +..+.+.|+|+|.++...
T Consensus       107 V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~  140 (260)
T 1vl5_A          107 VTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  140 (260)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            9865431         145678899999998764

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=91.94  E-value=0.16  Score=44.23  Aligned_cols=84  Identities=23%  Similarity=0.408  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|.++.|+| .|.+|...+..++.+ |.++++..++++...     ..+...  ...++.+.+...|+++-++...    
T Consensus       139 ~g~tvGIIG-lG~IG~~vA~~l~~~-G~~V~~~dr~~~~~~-----~~~~~~--~~~~l~ell~~aDvV~l~lPlt~~T~  209 (324)
T 3hg7_A          139 KGRTLLILG-TGSIGQHIAHTGKHF-GMKVLGVSRSGRERA-----GFDQVY--QLPALNKMLAQADVIVSVLPATRETH  209 (324)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCCCT-----TCSEEE--CGGGHHHHHHTCSEEEECCCCCSSST
T ss_pred             ccceEEEEE-ECHHHHHHHHHHHhC-CCEEEEEcCChHHhh-----hhhccc--ccCCHHHHHhhCCEEEEeCCCCHHHH
Confidence            478999999 999999999999998 999998887654321     122221  1123444556788888776521    


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          ...+..|+++..++.++
T Consensus       210 ~li~~~~l~~mk~gailIN~a  230 (324)
T 3hg7_A          210 HLFTASRFEHCKPGAILFNVG  230 (324)
T ss_dssp             TSBCTTTTTCSCTTCEEEECS
T ss_pred             HHhHHHHHhcCCCCcEEEECC
Confidence                33456677777777765

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=91.90  E-value=0.22  Score=41.46  Aligned_cols=36  Identities=22%  Similarity=0.278  Sum_probs=30.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      +++||+||+|.+|.+++..+... |.+++++.+++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~   37 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAA-GHQIVGIDIRDAE   37 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCchh
Confidence            47999999999999998888877 9999988887654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=91.89  E-value=0.29  Score=43.47  Aligned_cols=73  Identities=16%  Similarity=0.286  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccH-HHHHHcCCC-EEEeCCCCC---hhhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKV-EFVKELGAD-KVIDYRKTK---YEDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~-~~~~~~g~~-~v~~~~~~~---~~~~~~~~d~v~d~~g  221 (327)
                      .+.+|||+||+|.+|..++..+... | .+++++++++.+. +.+.. ... .++..+-.+   +.....++|+||.+++
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~l~~-~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~  108 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLEL-GVNQVHVVDNLLSAEKINVPD-HPAVRFSETSITDDALLASLQDEYDYVFHLAT  108 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCSEEEEECCCTTCCGGGSCC-CTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHc-CCceEEEEECCCCCchhhccC-CCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence            3578999999999999998888877 8 8888888765432 11110 111 112111112   2233468999999987


Q ss_pred             C
Q 020320          222 D  222 (327)
Q Consensus       222 ~  222 (327)
                      .
T Consensus       109 ~  109 (377)
T 2q1s_A          109 Y  109 (377)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=91.85  E-value=0.32  Score=41.56  Aligned_cols=88  Identities=16%  Similarity=0.211  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH-HHHcCC----CE--EEeCCCCChhhhccCccEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF-VKELGA----DK--VIDYRKTKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~-~~~~g~----~~--v~~~~~~~~~~~~~~~d~v~d~~  220 (327)
                      .+++++|+| +|++|.+++..+... | ++++..++.++.+. +++++.    ..  .++..  ++.+...++|++++++
T Consensus       127 ~~k~vlV~G-aGgiG~aia~~L~~~-G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~--~~~~~~~~~DilVn~a  201 (287)
T 1nvt_A          127 KDKNIVIYG-AGGAARAVAFELAKD-N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFS--GLDVDLDGVDIIINAT  201 (287)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHTSS-S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEE--CTTCCCTTCCEEEECS
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHC-C-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEe--eHHHhhCCCCEEEECC
Confidence            578999999 579999998888888 7 77777777665433 333321    00  01111  1123346799999998


Q ss_pred             CCchh---------hhhhhcCCCcEEEee
Q 020320          221 GDCKN---------SFVVAKDNAPIVDIT  240 (327)
Q Consensus       221 g~~~~---------~~~~l~~~g~~v~~g  240 (327)
                      |....         ....++++..++.+.
T Consensus       202 g~~~~~~~~~~~~~~~~~l~~~~~v~Dv~  230 (287)
T 1nvt_A          202 PIGMYPNIDVEPIVKAEKLREDMVVMDLI  230 (287)
T ss_dssp             CTTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred             CCCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            73211         123455555555554

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=91.85  E-value=0.081  Score=43.87  Aligned_cols=91  Identities=12%  Similarity=0.108  Sum_probs=58.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC----CE-EEeCCCCChhhhc--cCccEEE-
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA----DK-VIDYRKTKYEDIE--EKFDVLY-  217 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~----~~-v~~~~~~~~~~~~--~~~d~v~-  217 (327)
                      ..+|.+||=+| +| .|..+..+++.. +.++++++.+++..+.+++...    .. ++..+........  ..+|.++ 
T Consensus        58 ~~~G~rVLdiG-~G-~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~  134 (236)
T 3orh_A           58 SSKGGRVLEVG-FG-MAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY  134 (236)
T ss_dssp             TTTCEEEEEEC-CT-TSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred             ccCCCeEEEEC-CC-ccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEE
Confidence            46889999999 66 488888888865 6678888889988888876431    11 2221111111111  3478774 


Q ss_pred             eCCCCc-------------hhhhhhhcCCCcEEEe
Q 020320          218 DTIGDC-------------KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       218 d~~g~~-------------~~~~~~l~~~g~~v~~  239 (327)
                      |++...             ..+.++|+|||+++.+
T Consensus       135 D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~  169 (236)
T 3orh_A          135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  169 (236)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             eeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence            765421             3466899999998765

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=91.83  E-value=0.24  Score=40.67  Aligned_cols=36  Identities=25%  Similarity=0.337  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      ++++||+||+|.+|.+.+..+... |.+++++.++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~   37 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKAR-GYRVVVLDLRRE   37 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEccCcc
Confidence            578999999999999988888777 999998887654

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=91.83  E-value=0.47  Score=40.69  Aligned_cols=65  Identities=17%  Similarity=0.193  Sum_probs=49.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      .+|.|+| .|.+|...+..+... |.++++.++++++.+.+.+.|+..     ..+..+... .|++|-++..
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~-----~~~~~~~~~-aDvvi~~vp~   80 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEW-PGGVTVYDIRIEAMTPLAEAGATL-----ADSVADVAA-ADLIHITVLD   80 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTS-TTCEEEECSSTTTSHHHHHTTCEE-----CSSHHHHTT-SSEEEECCSS
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHCCCEE-----cCCHHHHHh-CCEEEEECCC
Confidence            5799999 899999888877777 889999999998888887776532     123444455 8888888764

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=91.82  E-value=0.29  Score=43.00  Aligned_cols=65  Identities=14%  Similarity=0.106  Sum_probs=49.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc----cCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE----EKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----~~~d~v~d~~g  221 (327)
                      .+|.|+| .|.+|.+.+..++.. |.++++.++++++.+.+.++|....     .+..+..    .+.|+||-++.
T Consensus         9 ~kIgIIG-~G~mG~slA~~L~~~-G~~V~~~dr~~~~~~~a~~~G~~~~-----~~~~e~~~~a~~~aDlVilavP   77 (341)
T 3ktd_A            9 RPVCILG-LGLIGGSLLRDLHAA-NHSVFGYNRSRSGAKSAVDEGFDVS-----ADLEATLQRAAAEDALIVLAVP   77 (341)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSCHHHHHHHHHTTCCEE-----SCHHHHHHHHHHTTCEEEECSC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeee-----CCHHHHHHhcccCCCEEEEeCC
Confidence            5689999 899999988888887 8899999999988888888887432     1222222    24688887776

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=91.80  E-value=0.32  Score=40.63  Aligned_cols=34  Identities=26%  Similarity=0.455  Sum_probs=26.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEE-EEeCCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHV-VATTST  184 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v-~~~~~~  184 (327)
                      +.+|+|.| +|++|..++..+... |...+ +++.+.
T Consensus        31 ~~~VlVvG-~Gg~G~~va~~La~~-Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVG-LGGLGCAASQYLASA-GVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence            46899999 899999998888888 87544 455544

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=91.77  E-value=3.7  Score=35.51  Aligned_cols=105  Identities=15%  Similarity=0.145  Sum_probs=64.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHH-HHHHcCCCEEEeCCCCChhhhcc--CccEEEeCCCCc---
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVE-FVKELGADKVIDYRKTKYEDIEE--KFDVLYDTIGDC---  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~--~~d~v~d~~g~~---  223 (327)
                      +|.|+| +|.+|...+..++...+.+++.+. +++++.+ +++++|..  .    .++.+.+.  .+|+|+.++...   
T Consensus         5 ~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~----~~~~~~l~~~~~D~V~i~tp~~~h~   77 (331)
T 4hkt_A            5 RFGLLG-AGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE--V----RTIDAIEAAADIDAVVICTPTDTHA   77 (331)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE--E----CCHHHHHHCTTCCEEEECSCGGGHH
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC--c----CCHHHHhcCCCCCEEEEeCCchhHH
Confidence            688999 899998777666655466776544 5666544 44667754  2    23444443  799999998743   


Q ss_pred             hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                      ..+..++..+ +-+.+..+.          ..+.+..+++.++.++....
T Consensus        78 ~~~~~al~~g-k~v~~EKP~----------~~~~~~~~~l~~~a~~~g~~  116 (331)
T 4hkt_A           78 DLIERFARAG-KAIFCEKPI----------DLDAERVRACLKVVSDTKAK  116 (331)
T ss_dssp             HHHHHHHHTT-CEEEECSCS----------CSSHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHcC-CcEEEecCC----------CCCHHHHHHHHHHHHHcCCe
Confidence            4455666665 444554432          23445566666666655443

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=91.73  E-value=0.22  Score=43.17  Aligned_cols=76  Identities=12%  Similarity=0.040  Sum_probs=46.1

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc--HHHHHHc----CCCEEEeCCCCC---hhhhcc--C
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK--VEFVKEL----GADKVIDYRKTK---YEDIEE--K  212 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~--~~~~~~~----g~~~v~~~~~~~---~~~~~~--~  212 (327)
                      -..+++.+|||+||+|.+|..++..+... |.+++++++++.+  ...++.+    +.. ++..+-.+   +.....  +
T Consensus         9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~   86 (335)
T 1rpn_A            9 HHGSMTRSALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLRELGIEGDIQ-YEDGDMADACSVQRAVIKAQ   86 (335)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCHHHHHTTCGGGEE-EEECCTTCHHHHHHHHHHHC
T ss_pred             cccccCCeEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCccccccchhhccccCceE-EEECCCCCHHHHHHHHHHcC
Confidence            34578999999999999999998888877 8899988876553  1233333    122 22221122   222233  4


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|+||.+++
T Consensus        87 ~d~Vih~A~   95 (335)
T 1rpn_A           87 PQEVYNLAA   95 (335)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEECcc
Confidence            799999987

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=91.72  E-value=3.4  Score=35.78  Aligned_cols=136  Identities=13%  Similarity=0.094  Sum_probs=77.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccH-HHHHHcCCCEEEeCCCCChhhhcc--CccEEEeCCCCc--
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKV-EFVKELGADKVIDYRKTKYEDIEE--KFDVLYDTIGDC--  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~--~~d~v~d~~g~~--  223 (327)
                      -++.|+| +|.+|...+..++...+.+++.+. +++++. ..++++|...+.    .++.+.+.  .+|+|+.++...  
T Consensus         6 ~~igiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~----~~~~~ll~~~~~D~V~i~tp~~~h   80 (330)
T 3e9m_A            6 IRYGIMS-TAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAY----GSYEELCKDETIDIIYIPTYNQGH   80 (330)
T ss_dssp             EEEEECS-CCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCB----SSHHHHHHCTTCSEEEECCCGGGH
T ss_pred             EEEEEEC-chHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCcee----CCHHHHhcCCCCCEEEEcCCCHHH
Confidence            4788999 899998877777765466666554 555554 445667764332    23444443  799999998743  


Q ss_pred             -hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCce
Q 020320          224 -KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGK  302 (327)
Q Consensus       224 -~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk  302 (327)
                       ..+..++..+.. +.+..+.          ..+.+..+++.++.++.....-.  ...+.+...-+.++.+.+....|+
T Consensus        81 ~~~~~~al~~gk~-vl~EKP~----------~~~~~e~~~l~~~a~~~g~~~~v--~~~~r~~p~~~~~k~~i~~g~iG~  147 (330)
T 3e9m_A           81 YSAAKLALSQGKP-VLLEKPF----------TLNAAEAEELFAIAQEQGVFLME--AQKSVFLPITQKVKATIQEGGLGE  147 (330)
T ss_dssp             HHHHHHHHHTTCC-EEECSSC----------CSSHHHHHHHHHHHHHTTCCEEE--CCSGGGCHHHHHHHHHHHTTTTCS
T ss_pred             HHHHHHHHHCCCe-EEEeCCC----------CCCHHHHHHHHHHHHHcCCeEEE--EEhhhhCHHHHHHHHHHhCCCCCC
Confidence             445666766644 4444332          23445666777777665544322  223333333333433333334444


Q ss_pred             E
Q 020320          303 V  303 (327)
Q Consensus       303 ~  303 (327)
                      +
T Consensus       148 i  148 (330)
T 3e9m_A          148 I  148 (330)
T ss_dssp             E
T ss_pred             e
Confidence            4

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=91.67  E-value=0.34  Score=45.28  Aligned_cols=70  Identities=23%  Similarity=0.333  Sum_probs=44.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH-HHHcCCCEEEeCCCCChhh-hccCccEEEeCCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF-VKELGADKVIDYRKTKYED-IEEKFDVLYDTIGD  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~-~~~~~d~v~d~~g~  222 (327)
                      .+++++|+|+ |++|.+++..+... |++++++.++.++.+. +++++.. ++...  +... ....+|++++++|.
T Consensus       363 ~~k~vlV~Ga-GGig~aia~~L~~~-G~~V~i~~R~~~~a~~la~~~~~~-~~~~~--dl~~~~~~~~DilVN~agv  434 (523)
T 2o7s_A          363 ASKTVVVIGA-GGAGKALAYGAKEK-GAKVVIANRTYERALELAEAIGGK-ALSLT--DLDNYHPEDGMVLANTTSM  434 (523)
T ss_dssp             ---CEEEECC-SHHHHHHHHHHHHH-CC-CEEEESSHHHHHHHHHHTTC--CEETT--TTTTC--CCSEEEEECSST
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCc-eeeHH--HhhhccccCceEEEECCCC
Confidence            4678999995 89999998888888 8888888888776544 4556543 22222  1211 12358999999873

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=91.66  E-value=0.44  Score=43.83  Aligned_cols=91  Identities=15%  Similarity=0.214  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEE-EeCCC-CChhhhccCccEEEeCCCCc-
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKV-IDYRK-TKYEDIEEKFDVLYDTIGDC-  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v-~~~~~-~~~~~~~~~~d~v~d~~g~~-  223 (327)
                      .+.+|+|+| +|.+|.+++..+...++.++.++.+++++.+.+. +.+...+ ++..+ ..+...+.++|+|+++++.. 
T Consensus        22 ~~k~VlIiG-AGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~  100 (467)
T 2axq_A           22 MGKNVLLLG-SGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTF  100 (467)
T ss_dssp             -CEEEEEEC-CSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGG
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhh
Confidence            356899999 5999999888777664567777778877765443 3343222 22221 12333456899999999843 


Q ss_pred             --hhhhhhhcCCCcEEEe
Q 020320          224 --KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 --~~~~~~l~~~g~~v~~  239 (327)
                        .....+++.+..++..
T Consensus       101 ~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A          101 HPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             HHHHHHHHHHHTCEEEEC
T ss_pred             hHHHHHHHHhcCCEEEEe
Confidence              1233455665555554

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=91.66  E-value=0.77  Score=42.03  Aligned_cols=96  Identities=16%  Similarity=0.189  Sum_probs=61.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCC---cEEEEeCCcccHHHHHHcCCCEEE-eCCCCChh----hhccCccEE
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA---SHVVATTSTPKVEFVKELGADKVI-DYRKTKYE----DIEEKFDVL  216 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~---~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~----~~~~~~d~v  216 (327)
                      ++....+|+|+| +|++|..++.++......   .+++++..+.+.+..+..|...+. .-+..+..    ..+++.|+|
T Consensus         9 ~~~~~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvV   87 (480)
T 2ph5_A            9 KILFKNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFL   87 (480)
T ss_dssp             CBCCCSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred             eecCCCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEE
Confidence            455667899999 999999999888776455   677777666655666666753321 22223222    233445999


Q ss_pred             EeCCCCc---hhhhhhhcCCCcEEEeeC
Q 020320          217 YDTIGDC---KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       217 ~d~~g~~---~~~~~~l~~~g~~v~~g~  241 (327)
                      ++++-..   ..+-.|++.|-.++....
T Consensus        88 IN~s~~~~~l~Im~acleaGv~YlDTa~  115 (480)
T 2ph5_A           88 IDVSIGISSLALIILCNQKGALYINAAT  115 (480)
T ss_dssp             EECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred             EECCccccCHHHHHHHHHcCCCEEECCC
Confidence            9866422   334467777777777754

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=91.65  E-value=0.95  Score=40.33  Aligned_cols=76  Identities=24%  Similarity=0.257  Sum_probs=48.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHH-HHHHhhcCCcEEEEeCCcc----c------------HHHHHHcCCCEE-EeCCCCChh
Q 020320          146 FKTGQTIFIVGGAGGVGTLVI-QLAKHFYGASHVVATTSTP----K------------VEFVKELGADKV-IDYRKTKYE  207 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~-~la~~~~g~~~v~~~~~~~----~------------~~~~~~~g~~~v-~~~~~~~~~  207 (327)
                      ...++++||+|+++++|+++. .+|... |+.++++....+    +            .+.+++.|.... ++-+-.+..
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~-GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGY-GAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHH-CCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhC-CCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence            356789999999999999854 555455 888888874322    1            134566675443 333332221


Q ss_pred             h----------hccCccEEEeCCCC
Q 020320          208 D----------IEEKFDVLYDTIGD  222 (327)
Q Consensus       208 ~----------~~~~~d~v~d~~g~  222 (327)
                      .          ..+++|+++.+++.
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLAS  150 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEeccc
Confidence            1          12579999999874

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=91.62  E-value=0.71  Score=40.48  Aligned_cols=82  Identities=20%  Similarity=0.214  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|.+.+..++.. |.++++..+++++     ..+...     ..+..+.+...|+++-++...    
T Consensus       170 ~gktiGIIG-lG~IG~~vA~~l~~~-G~~V~~~dr~~~~-----~~~~~~-----~~sl~ell~~aDvVil~vP~t~~t~  237 (340)
T 4dgs_A          170 KGKRIGVLG-LGQIGRALASRAEAF-GMSVRYWNRSTLS-----GVDWIA-----HQSPVDLARDSDVLAVCVAASAATQ  237 (340)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSCCT-----TSCCEE-----CSSHHHHHHTCSEEEECC-------
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCccc-----ccCcee-----cCCHHHHHhcCCEEEEeCCCCHHHH
Confidence            378999999 999999999999988 9998888876654     122211     124555667899999887521    


Q ss_pred             ----hhhhhhhcCCCcEEEeeC
Q 020320          224 ----KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~  241 (327)
                          ...+..++++..++.++-
T Consensus       238 ~li~~~~l~~mk~gailIN~aR  259 (340)
T 4dgs_A          238 NIVDASLLQALGPEGIVVNVAR  259 (340)
T ss_dssp             ---CHHHHHHTTTTCEEEECSC
T ss_pred             HHhhHHHHhcCCCCCEEEECCC
Confidence                345677888888887753

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=91.62  E-value=0.46  Score=43.46  Aligned_cols=88  Identities=13%  Similarity=0.149  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCC---ChhhhccCccEEEeCCCCc-
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKT---KYEDIEEKFDVLYDTIGDC-  223 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~---~~~~~~~~~d~v~d~~g~~-  223 (327)
                      +++|+|+| +|.+|.+.+..+... |.+++++.+++++.+.+ ++++....+..+-.   +....+.++|+|+++++.. 
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~-G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~   80 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF   80 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTT-TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--C
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC-cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcccc
Confidence            57899998 899999988888777 88877777877655433 22331112211212   2233456899999999843 


Q ss_pred             h--hhhhhhcCCCcEEE
Q 020320          224 K--NSFVVAKDNAPIVD  238 (327)
Q Consensus       224 ~--~~~~~l~~~g~~v~  238 (327)
                      .  ....++.++..++.
T Consensus        81 ~~~i~~a~l~~g~~vvd   97 (450)
T 1ff9_A           81 HATVIKSAIRQKKHVVT   97 (450)
T ss_dssp             HHHHHHHHHHHTCEEEE
T ss_pred             chHHHHHHHhCCCeEEE
Confidence            2  23344555444443

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=91.58  E-value=0.11  Score=45.36  Aligned_cols=72  Identities=22%  Similarity=0.281  Sum_probs=45.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcC-------CcEEEEeCCcccHHHHHHcC--CCEE-EeCCC-CChhhhc-cCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYG-------ASHVVATTSTPKVEFVKELG--ADKV-IDYRK-TKYEDIE-EKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g-------~~~v~~~~~~~~~~~~~~~g--~~~v-~~~~~-~~~~~~~-~~~d~  215 (327)
                      .+.+|||+||+|.+|..++..+... |       .+++++++++.+...  ..+  ...+ .|-.+ ..+.... .++|+
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~-g~~~~r~~~~V~~~~r~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~   89 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKD-GSLGGKPVEKFTLIDVFQPEAPA--GFSGAVDARAADLSAPGEAEKLVEARPDV   89 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHH-CEETTEEEEEEEEEESSCCCCCT--TCCSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhc-CCcccCCCceEEEEEccCCcccc--ccCCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence            4578999999999999998888777 7       678888776543211  111  1111 12222 2223334 48999


Q ss_pred             EEeCCCC
Q 020320          216 LYDTIGD  222 (327)
Q Consensus       216 v~d~~g~  222 (327)
                      ||.++|.
T Consensus        90 vih~A~~   96 (342)
T 2hrz_A           90 IFHLAAI   96 (342)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999873

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=91.55  E-value=0.38  Score=45.85  Aligned_cols=73  Identities=23%  Similarity=0.368  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-c-HHHHHHcCCCEEEeCCCC--Chhh-------hccCccEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-K-VEFVKELGADKVIDYRKT--KYED-------IEEKFDVL  216 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~-~~~~~~~g~~~v~~~~~~--~~~~-------~~~~~d~v  216 (327)
                      .|+.++|+||++++|.+.++.+... |+++++..+... + .+.+++.|...+....+-  +...       ...++|++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~-Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL  399 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKY-GAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL  399 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHC-CCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence            4788999999999999988888877 999888764322 1 222334454333221111  1111       12479999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++|
T Consensus       400 VnNAG  404 (604)
T 2et6_A          400 VNNAG  404 (604)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=91.54  E-value=0.11  Score=45.74  Aligned_cols=38  Identities=24%  Similarity=0.452  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCccc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPK  186 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~  186 (327)
                      .+.+|||+||+|.+|..++..+... | .+++++.+++..
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~   83 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDG   83 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHT-TCCCEEEEECCSSG
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCcEEEEEecCCCc
Confidence            3568999999999999998888877 7 888888876543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=91.51  E-value=0.74  Score=42.67  Aligned_cols=74  Identities=20%  Similarity=0.396  Sum_probs=45.0

Q ss_pred             CCC--CEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcc---c-HH---HHHHcCCCEEE-eCCCCChhh---hc--
Q 020320          147 KTG--QTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTP---K-VE---FVKELGADKVI-DYRKTKYED---IE--  210 (327)
Q Consensus       147 ~~~--~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~---~-~~---~~~~~g~~~v~-~~~~~~~~~---~~--  210 (327)
                      +++  .++||+||+|++|..++..+... |. +++.+.++..   . .+   .+++.|....+ .-+-.+...   ..  
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~-Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQ-GAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHT-TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHC-CCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            445  89999999999999988877777 87 4555555422   1 22   23445654322 111122111   11  


Q ss_pred             ----cCccEEEeCCC
Q 020320          211 ----EKFDVLYDTIG  221 (327)
Q Consensus       211 ----~~~d~v~d~~g  221 (327)
                          .++|.+|++.|
T Consensus       314 i~~~g~ld~vVh~AG  328 (496)
T 3mje_A          314 LPEDAPLTAVFHSAG  328 (496)
T ss_dssp             CCTTSCEEEEEECCC
T ss_pred             HHHhCCCeEEEECCc
Confidence                36899999987

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=91.46  E-value=3.7  Score=35.75  Aligned_cols=86  Identities=19%  Similarity=0.221  Sum_probs=54.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHH-HHHHcCCCEEEeCCCCChhhhcc--CccEEEeCCCCc---
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVE-FVKELGADKVIDYRKTKYEDIEE--KFDVLYDTIGDC---  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~--~~d~v~d~~g~~---  223 (327)
                      +|.|+| +|.+|...+..++...+.+++.+. +++++.+ .++++|...+..    ++.+.+.  .+|+|+.++...   
T Consensus         4 rvgiIG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~----~~~~ll~~~~~D~V~i~tp~~~h~   78 (344)
T 3ezy_A            4 RIGVIG-LGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYK----DPHELIEDPNVDAVLVCSSTNTHS   78 (344)
T ss_dssp             EEEEEC-CSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEES----SHHHHHHCTTCCEEEECSCGGGHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeC----CHHHHhcCCCCCEEEEcCCCcchH
Confidence            688999 899998766666555466666554 5666544 456777654442    3444443  799999998743   


Q ss_pred             hhhhhhhcCCCcEEEeeCC
Q 020320          224 KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       224 ~~~~~~l~~~g~~v~~g~~  242 (327)
                      ..+..++..+.. +.+..+
T Consensus        79 ~~~~~al~~gk~-v~~EKP   96 (344)
T 3ezy_A           79 ELVIACAKAKKH-VFCEKP   96 (344)
T ss_dssp             HHHHHHHHTTCE-EEEESC
T ss_pred             HHHHHHHhcCCe-EEEECC
Confidence            445566666544 445543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=91.46  E-value=0.47  Score=44.33  Aligned_cols=36  Identities=14%  Similarity=0.235  Sum_probs=28.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT  181 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~  181 (327)
                      .++++.++||+||+|++|..++..+... |.++++.+
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~-G~~~vvl~  282 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARD-GAGHLLLH  282 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHc-CCCEEEEE
Confidence            3567899999999999999988877777 88755443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	327
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	1e-23
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	2e-21
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	5e-20
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	9e-20
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-17
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	2e-17
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	2e-17
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	5e-17
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	5e-15
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	3e-14
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	5e-14
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	6e-14
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	9e-14
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	1e-13
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	2e-13
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	3e-13
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	3e-13
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	5e-13
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	6e-13
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	9e-13
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	2e-12
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	1e-11
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	1e-11
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-11
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	4e-11
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	6e-11
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	8e-11
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	8e-11
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	1e-10
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	1e-10
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	2e-10
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-10
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	9e-10
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	1e-09
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	1e-09
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	1e-09
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-09
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	4e-09
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	5e-09
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	5e-09
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	9e-09
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	1e-08
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	2e-08
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	3e-08
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	7e-08
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	1e-07
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-07
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	6e-07
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	9e-06
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-05
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	1e-05
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	2e-05
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	6e-04
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	0.001

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 93.0 bits (230), Expect = 1e-23
 Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 8/168 (4%)

Query: 1   MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAV 60
           +  A   E+      + +          D +L++V  + +N  D    +           
Sbjct: 3   LFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVRE--- 59

Query: 61  PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
               +   + A GT V+  +        +   + E  + + G L+E+  V    +   P+
Sbjct: 60  --YPLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQ 117

Query: 121 NISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           N+S +EA    L      E          + I      G V   +++L
Sbjct: 118 NLSLKEAMVDQLLTIVDREVSLEETPGALKDILQNRIQGRV---IVKL 162

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 86.9 bits (214), Expect = 2e-21
 Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 8/154 (5%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSK-RRQRPLFPSDFPAVPG 62
           A+   +   +    +    +       +LV+V  +++N  D             +P VPG
Sbjct: 6   AFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPG 65

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNI 122
            D+AG+VV+      +F  GDEV     +      +   G  +E+  +    +   PK +
Sbjct: 66  IDLAGVVVSSQH--PRFREGDEVIATGYEIG----VTHFGGYSEYARLHGEWLVPLPKGL 119

Query: 123 SFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVG 156
               A  + LA           G   G+T+  + 
Sbjct: 120 ER-IAQEISLAELPQALKRILRGELRGRTVVRLA 152

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 83.9 bits (206), Expect = 5e-20
 Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 22/169 (13%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQR---PLFPSDFPAVPGCDMA 66
           Y     L+L   P+P P+ D++L+Q+    +   D    +      F    P V G + +
Sbjct: 8   YKQ-NDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEAS 66

Query: 67  GIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGA------------------LAEFI 108
           G VV  G +V     GD V           +  + G                   LA + 
Sbjct: 67  GTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYY 126

Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGG 157
           V       K P N + ++  +    ++  ++ F+ A  K   TI ++  
Sbjct: 127 VHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 175

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (205), Expect = 9e-20
 Identities = 35/172 (20%), Positives = 60/172 (34%), Gaps = 24/172 (13%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQR---PLFPSDFPAVPGCDMA 66
           +GP   L+L ++P+P P  +++L+++ +  +   D    +      F    P V G + +
Sbjct: 14  HGP-GDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEAS 72

Query: 67  GIVVAKGTSVTKFNTGDEVYGN------------IQDFNAEGKLKQLG------ALAEFI 108
           G V   G+SV     GD V               +  +N    +           L  F 
Sbjct: 73  GTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFY 132

Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGG 160
               +   K P N+        PL    A+E F+T     G  I +      
Sbjct: 133 KHNAAFCYKLPDNVKPLVTHRFPLE--KALEAFETFKKGLGLKIMLKCDPSD 182

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 1e-17
 Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 39/185 (21%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +   + L + +  +  P+  ++ +++ A A+   D+           FP + G   AGIV
Sbjct: 13  WEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIV 72

Query: 70  VAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLG--------------------------- 102
            + G  VTK   GD V         E K                                
Sbjct: 73  ESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCK 132

Query: 103 -----------ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGF-KTGQ 150
                        +E+ VV +  +AK    I  +E  +  L+     + F+     K+ +
Sbjct: 133 GKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIR 192

Query: 151 TIFIV 155
           T+  +
Sbjct: 193 TVVKI 197

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 76.1 bits (186), Expect = 2e-17
 Identities = 25/135 (18%), Positives = 42/135 (31%), Gaps = 7/135 (5%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSK-RRQRPLFPSDFPAVPG 62
           A   E+   K +  +            + V V  ++LN  D+     +     +FP +PG
Sbjct: 3   ALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPG 62

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNI 122
            D AG V               + G     N        G LAE   V+   +   P+  
Sbjct: 63  IDFAGTVRTSEDPRFHAGQEVLLTGWGVGEN------HWGGLAEQARVKGDWLVAMPQGQ 116

Query: 123 SFEEAASLPLAVQTA 137
           + +E +         
Sbjct: 117 AAKEISLSEAPNFAE 131

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 76.5 bits (187), Expect = 2e-17
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 22/171 (12%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FPSDFPAVPG 62
           A     YG    L++ +  +P P   Q+LV++ A+ +   D    +         P +PG
Sbjct: 8   AAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPG 65

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYG------------------NIQDFNAEGKLKQLGAL 104
            +  G V A G+ VT+   GD V                     + +          G  
Sbjct: 66  HEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGY 125

Query: 105 AEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIV 155
           AE+++ + + +   PKN+           +   ++  + AG   G+ +  +
Sbjct: 126 AEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQMR-AGQIEGRIVLEM 175

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 76.1 bits (186), Expect = 5e-17
 Identities = 27/185 (14%), Positives = 62/185 (33%), Gaps = 39/185 (21%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +   + L + +  +  P  +++ +++ A  +   D            FP V G + AGIV
Sbjct: 15  WEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIV 74

Query: 70  VAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQ----------------------------- 100
            + G  VT+F  G++V         E +  Q                             
Sbjct: 75  ESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCK 134

Query: 101 ---------LGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAG-FKTGQ 150
                        +++ VV +  +AK   ++  +E  +  + +++  +        K  +
Sbjct: 135 GRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIR 194

Query: 151 TIFIV 155
           T+  +
Sbjct: 195 TVLSL 199

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (168), Expect = 5e-15
 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 23/170 (13%)

Query: 1   MQNAWYYEEYGPKEVLKL-GDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFPSDFP 58
           +  A    E+G  EVLKL  D  +P P+  Q+L++V A  +NP+++  R          P
Sbjct: 2   LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLP 61

Query: 59  AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
             PG D+AG++ A G + + F  GD V+ +             G  AE+ +  +  + K 
Sbjct: 62  YTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTIS---------GGYAEYALAADHTVYKL 112

Query: 119 PKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
           P+ +     +  PL                     I  G+G  G +++ L
Sbjct: 113 PEKLKPVIGSQYPL-----------EKVAEAHENIIH-GSGATGKMILLL 150

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 66.8 bits (162), Expect = 3e-14
 Identities = 28/151 (18%), Positives = 43/151 (28%), Gaps = 23/151 (15%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGC 63
           AW  +  G    L+L D P P  +  +++++V A  LN  D   R         P     
Sbjct: 3   AWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPG 60

Query: 64  DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNIS 123
                       V     G               L   G LAE + V +  +   P+   
Sbjct: 61  ME----------VVGVVEGRRYAA----------LVPQGGLAERVAVPKGALLPLPEGRP 100

Query: 124 FEEAASLPLAVQTAIEGFKTAGFKTGQTIFI 154
                      + A       G  TG+ +  
Sbjct: 101 VVGPVFPFAEAEAAFRALLDRG-HTGKVVVR 130

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 67.3 bits (163), Expect = 5e-14
 Identities = 26/191 (13%), Positives = 56/191 (29%), Gaps = 43/191 (22%)

Query: 122 ISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVG-TLVIQLAKHFYGASHVV 179
           ++  + A++ +   TA            G+  FI  G          Q+ K      + +
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN--FNSI 58

Query: 180 ATTSTP-----KVEFVKELGADKVIDYRKTKYEDIEEKF-----------DVLYDTIGDC 223
           +           V  +KELGA +VI   +    +                 +  + +G  
Sbjct: 59  SVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK 118

Query: 224 ---KNSFVVAKD--NAPIVDITWPP---SHPRAIYSSLTVSG---------------EIL 260
                +  +  +        +++ P        I+ + T +G                 L
Sbjct: 119 SSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTL 178

Query: 261 EKLRPFIESGK 271
            ++  + E GK
Sbjct: 179 NQIIAWYEEGK 189

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 66.9 bits (162), Expect = 6e-14
 Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 29/177 (16%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ--------RPLFPS 55
           A    E G  + L L +  +P P+  Q+L++V AA +   D   RQ              
Sbjct: 3   AVRLVEIG--KPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGV 60

Query: 56  DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGK-----------------L 98
             P   G ++AG +   G  V  ++ GD V  N                          +
Sbjct: 61  KLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI 120

Query: 99  KQLGALAEFIVVEESLIAKKPKNISFEEAASLPL-AVQTAIEGFKTAGFKTGQTIFI 154
              GA AE+++V       K + +      ++ L     AI+  +      G+ + I
Sbjct: 121 NFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFK-AIGRQVLI 176

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 66.9 bits (162), Expect = 9e-14
 Identities = 32/211 (15%), Positives = 56/211 (26%), Gaps = 66/211 (31%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
                  +L    +  PQ D++LV+V A  +   D   R +  +P   PAV G + +GI+
Sbjct: 10  PCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQK-YPVPLPAVLGHEGSGII 68

Query: 70  VAKGTSVTKFNTGDEVYGNIQ-----DFNAEGK--------------------------- 97
            A G +VT+   GD V  +            G                            
Sbjct: 69  EAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHD 128

Query: 98  -------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQ 150
                       + A + +  E+   K  K+  F++                        
Sbjct: 129 QGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLV---------------------- 166

Query: 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
                     +    I   K       ++  
Sbjct: 167 ---KFYAFDEINQAAIDSRKGI-TLKPIIKI 193

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.4 bits (161), Expect = 1e-13
 Identities = 23/175 (13%), Positives = 44/175 (25%), Gaps = 26/175 (14%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGC 63
               + +   +  K   +         + +++ A  +   D             P V G 
Sbjct: 9   GIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGH 68

Query: 64  DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGK-------------------------- 97
           ++ G VV  G          +  G      +  +                          
Sbjct: 69  EIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDG 128

Query: 98  LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTI 152
               G  A ++ V E  +   P+NI  E        V  A E  +    +   T+
Sbjct: 129 YVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFTL 183

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 65.7 bits (159), Expect = 2e-13
 Identities = 29/189 (15%), Positives = 57/189 (30%), Gaps = 45/189 (23%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +     L + +  +  P+  ++ +QV A  + P D               V G + AGIV
Sbjct: 15  WKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPV-VLGHECAGIV 73

Query: 70  VAKGTSVTKFNTGDEVYGNIQDFNAEGK-------------------------------- 97
            + G  VT F  GD+V           K                                
Sbjct: 74  ESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSR 133

Query: 98  ----------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFK 147
                        + + +++ VV E+ +A+       +   +  L  ++  +       K
Sbjct: 134 FTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAIDLM--K 191

Query: 148 TGQTIFIVG 156
            G++I  + 
Sbjct: 192 EGKSIRTIL 200

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 65.0 bits (157), Expect = 3e-13
 Identities = 33/174 (18%), Positives = 54/174 (31%), Gaps = 28/174 (16%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKR-RQRPLFPSDFPAVPG 62
           A   E++   E LK+ +   PT  + ++LV+++A  +   D              P +PG
Sbjct: 3   AAVVEQFK--EPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPG 60

Query: 63  CDMAGIVVAKGTSVTKFNTGDEVYG------------------NIQDFNAEGKLKQLGAL 104
            +  GIV   G  VT    GD V                     + +          G  
Sbjct: 61  HEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGY 120

Query: 105 AEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA--GFKTGQTIFIVG 156
           AE+       + K P N   E      +        F     G   G+ +  + 
Sbjct: 121 AEYCRAAADYVVKIPDNTIIEVQPLEKINE-----VFDRMLKGQINGRVVLTLE 169

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 64.3 bits (155), Expect = 3e-13
 Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 11/150 (7%)

Query: 7   YEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMA 66
           + ++G  EVL+  +F    P  +++ V+ +A  +N ID+  R     P   P+  G + A
Sbjct: 6   FHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAA 65

Query: 67  GIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFE- 125
           GIV   G+ V     GD V                 A +    +     A  P  I  + 
Sbjct: 66  GIVSKVGSGVKHIKAGDRVVYAQSALG---------AYSSVHNIIADKAAILPAAIKVDV 116

Query: 126 -EAASLPLAVQTAIEGFKTAGFKTGQTIFI 154
            E    PL           +    G ++ I
Sbjct: 117 AEQQKYPLKDAQRAHEILESRATQGSSLLI 146

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 61.5 bits (149), Expect = 5e-13
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 7/79 (8%)

Query: 122 ISFEEAASLPLAVQTAIEGFKTAGFK----TGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           +   +A  +  A  TA+                 I + G +GGVG+  + L         
Sbjct: 1   LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY--Q 58

Query: 178 VVATTSTP-KVEFVKELGA 195
           VVA +      E++K LGA
Sbjct: 59  VVAVSGRESTHEYLKSLGA 77

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 64.5 bits (156), Expect = 6e-13
 Identities = 28/204 (13%), Positives = 47/204 (23%), Gaps = 38/204 (18%)

Query: 4   AWYYEEYGPKEVLKLGD----FPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP----- 54
              Y   G  EV K+       P        ++++V +  +   D    +          
Sbjct: 4   GVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGLV 63

Query: 55  ------------SDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLG 102
                                     V          +  +   G     N        G
Sbjct: 64  LGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYG 123

Query: 103 ---------ALAEFIVV--EESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQT 151
                      AE+++V   +  + K P      E  ++   V   +     A    G+ 
Sbjct: 124 YVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAPRGYGEF 183

Query: 152 IFIVGGAGGVGTLVIQLAKHFYGA 175
                 AG     VI   K F  A
Sbjct: 184 -----DAGVPKKFVIDPHKTF-SA 201

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 64.1 bits (155), Expect = 9e-13
 Identities = 30/194 (15%), Positives = 57/194 (29%), Gaps = 49/194 (25%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           + P + L L    +  P+  ++ +++ A+ +   DS   +    PS FP + G +  G+V
Sbjct: 15  WEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEI-IPSKFPVILGHEAVGVV 73

Query: 70  VAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLG--------------------------- 102
            + G  VT    GD+V           +  +                             
Sbjct: 74  ESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCR 133

Query: 103 -----------ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQT 151
                         E+ VV +  +AK    I+     S  L +                 
Sbjct: 134 GKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTL---------DQINKAFE 184

Query: 152 IFIVGGAGGVGTLV 165
           +    G G    ++
Sbjct: 185 LLSS-GQGVRSIMI 197

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 62.9 bits (152), Expect = 2e-12
 Identities = 27/185 (14%), Positives = 62/185 (33%), Gaps = 41/185 (22%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           +  K+   + +  +  P+  ++ +++ A  +   D          +  P + G + AGIV
Sbjct: 15  WEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGT-LVTPLPVIAGHEAAGIV 73

Query: 70  VAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQ----------------------------- 100
            + G  VT    GD+V         + ++ +                             
Sbjct: 74  ESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCR 133

Query: 101 ---------LGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQT 151
                        +++ VV+E  +AK     + +   +  L  +   EGF     ++G++
Sbjct: 134 GKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINEGF--DLLRSGES 191

Query: 152 IFIVG 156
           I  + 
Sbjct: 192 IRTIL 196

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 60.5 bits (145), Expect = 1e-11
 Identities = 32/170 (18%), Positives = 53/170 (31%), Gaps = 20/170 (11%)

Query: 122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
           ++  EAA L  +  T     + A     +T+ +VG  GG+GT+ +Q+AK   GA+ +   
Sbjct: 1   LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 60

Query: 182 TSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDI-- 239
                VE  K  GAD VI+           +             +      +     +  
Sbjct: 61  VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK 120

Query: 240 ------------TWPPSHPRAIYSSLTVSG------EILEKLRPFIESGK 271
                             P    S +   G           +    E+GK
Sbjct: 121 QGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 170

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 60.3 bits (145), Expect = 1e-11
 Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 26/175 (14%)

Query: 122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
           +  E A  +   + T   G + A  + G ++ ++ G G VG + I  AK       +   
Sbjct: 1   MPLENAVMITDMMTTGFHGAELADIEMGSSVVVI-GIGAVGLMGIAGAKLRGAGRIIGVG 59

Query: 182 TSTPKVEFVKELGADKVIDYRKTKYED------IEEKFDVLYDTIG---DCKNSFVVAKD 232
           +    VE  K  GA  +++Y+    ED        +  D +    G       +  + K 
Sbjct: 60  SRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119

Query: 233 NAPIV---------DITWPPSHPRAIYSSLTVSG-------EILEKLRPFIESGK 271
              I           +  P        +  T+ G          E+LR  +   +
Sbjct: 120 GGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDMVVYNR 174

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 60.0 bits (144), Expect = 2e-11
 Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 9/107 (8%)

Query: 124 FEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
            ++   L   + T       TA  + G    + G  G     VI   K    +  +    
Sbjct: 3   LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGL-AVIMGCKVAGASRIIGVDI 61

Query: 183 STPKVEFVKELGADKVIDYRKTKY-------EDIEEKFDVLYDTIGD 222
           +  K    KE GA + I+ +           E  +   D  ++ IG+
Sbjct: 62  NKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGN 108

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.5 bits (140), Expect = 4e-11
 Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 26/173 (15%)

Query: 122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
           I    AA L     T        G   G+ + IV G GG+G++   ++K     ++V+ +
Sbjct: 1   IPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIV-GLGGIGSMGTLISKAMGAETYVI-S 58

Query: 182 TSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAP------ 235
            S+ K E   ++GAD  I     +  D  EK+   +D I  C +S      N        
Sbjct: 59  RSSRKREDAMKMGADHYIATL--EEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKV 116

Query: 236 --------IVDITWPPSHPRAIYSSLTVSG-------EILEKLRPFIESGKLK 273
                   I +     S       ++++S        E+ + L+  +    +K
Sbjct: 117 GGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLK-LVSEKDIK 168

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 58.5 bits (140), Expect = 6e-11
 Identities = 42/182 (23%), Positives = 60/182 (32%), Gaps = 37/182 (20%)

Query: 122 ISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           ISFE+AA+  L   T      KT   K  +       AGGVG +  Q AK   GA  +  
Sbjct: 1   ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKA-LGAKLIGT 59

Query: 181 TTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAP----- 235
             +  K +   + GA +VI+YR+   ED+ E+   +            V +D        
Sbjct: 60  VGTAQKAQSALKAGAWQVINYRE---EDLVERLKEITGGKKVRVVYDSVGRDTWERSLDC 116

Query: 236 -------------IVDITWPPSHPRAIYSSLTVSG--------------EILEKLRPFIE 268
                           +T           SL V+               E   +L   I 
Sbjct: 117 LQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIA 176

Query: 269 SG 270
           SG
Sbjct: 177 SG 178

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 57.9 bits (138), Expect = 8e-11
 Identities = 25/179 (13%), Positives = 53/179 (29%), Gaps = 19/179 (10%)

Query: 1   MQNAWYYEEYG-PKEVLKL--GDFPLPTPQHDQLLVQVRAAALNPIDSKRR------QRP 51
              A  Y ++G PK+VL     +        ++++V+   + +NP D  +       +  
Sbjct: 3   TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPA 62

Query: 52  LFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVE 111
                    P        + +   V    +  E    +   +      +        +  
Sbjct: 63  KTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWR-----THALGN 117

Query: 112 ESLIAKKPKNISFEEAASLPLAVQTAIEGFKT--AGFKTGQTIFIVGGA-GGVGTLVIQ 167
           +    K P     +  A+      T  +  +T   G K    ++  G A    G  +I 
Sbjct: 118 DDDFIKLPNPAQSK--ANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 8e-11
 Identities = 35/173 (20%), Positives = 62/173 (35%), Gaps = 25/173 (14%)

Query: 122 ISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           ++FEE A + PL+V   I   +  G   G  + + G AG +G + + +AK    A  VV 
Sbjct: 1   VTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVT 57

Query: 181 TTSTPKVEFVKELGADKVIDYRKTKYEDIE--------EKFDVLYDTIG---DCKNSFVV 229
             S  ++   KE+GAD V+   K   ++I          K +V  +  G     +     
Sbjct: 58  DLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYA 117

Query: 230 AKDNAPIVDITWPP-----SHPRAIYSSLTVSG-----EILEKLRPFIESGKL 272
            +    +V +             A    + + G              + S  +
Sbjct: 118 TRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSV 170

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 57.9 bits (139), Expect = 1e-10
 Identities = 27/183 (14%), Positives = 54/183 (29%), Gaps = 40/183 (21%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGC 63
           A   E++   + L   +F +       +LV++ +A +   D    +        P + G 
Sbjct: 7   AMVLEKFN--QPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGH 64

Query: 64  DMAGIVVAKGTSVTKFNTGDEVYGNIQ-----------DFNAEGKLKQL----------- 101
           + AG VV         N      G++             +    K   L           
Sbjct: 65  EGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINR 124

Query: 102 ---------GALAEFIVV-EESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQT 151
                    G  +  IV+  E+ + K  + I+       PL    A +  +    +    
Sbjct: 125 GCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL----PLK--EANKALELMESREALK 178

Query: 152 IFI 154
           + +
Sbjct: 179 VIL 181

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 57.7 bits (138), Expect = 1e-10
 Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)

Query: 124 FEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
            E+   +     T      K A    G T  +  G GGVG  VI   K    A  +    
Sbjct: 3   LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVF-GLGGVGLSVIMGCKAAGAARIIGVDI 61

Query: 183 STPKVEFVKELGADKVIDYRKTK-------YEDIEEKFDVLYDTIG 221
           +  K    KE+GA + ++ +  K        E      D  ++ IG
Sbjct: 62  NKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 107

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 57.2 bits (137), Expect = 2e-10
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 122 ISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           +  E    L   +QT               +  +  GAG VG   +  AK    +  +  
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSF-VTWGAGAVGLSALLAAKVCGASIIIAV 59

Query: 181 TTSTPKVEFVKELGADKVIDYRKTKY-EDIEEKFDVLYDTIGDCKNSFVVAKDN------ 233
                ++E  K+LGA  VI+ +       I+E  D   +   +   S  + K        
Sbjct: 60  DIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGI 119

Query: 234 --------APIVDITWPPSHPRAIYSSLTVSG---------EILEKLRPFIESGK 271
                   AP +  T        +    T+ G         + + +L    + GK
Sbjct: 120 LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 57.0 bits (136), Expect = 2e-10
 Identities = 15/92 (16%), Positives = 22/92 (23%), Gaps = 2/92 (2%)

Query: 124 FEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
            +    L   V T       TA  + G T  + G        V+            V   
Sbjct: 3   LDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLN 62

Query: 183 STPKVEFVKELGADKVIDYRKTKYEDIEEKFD 214
              K E  K  GA   ++         +    
Sbjct: 63  PD-KFEKAKVFGATDFVNPNDHSEPISQVLSK 93

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 55.0 bits (131), Expect = 9e-10
 Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 27/158 (17%)

Query: 10  YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
           Y  K+ L+  D     P  + + +++    +   D  + +     + +P VPG ++ G V
Sbjct: 7   YSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRV 66

Query: 70  VAKGTSVTKFNTGDEV--------------------------YGNIQDFNAEGKLKQLGA 103
           VA G  V K+  GD V                           G       +     LG 
Sbjct: 67  VAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGG 126

Query: 104 LAEFIVVEESLIAKKP-KNISFEEAASLPLAVQTAIEG 140
            ++ IVV E  + +    +I    A  +  A +  + G
Sbjct: 127 YSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRG 164

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 54.6 bits (130), Expect = 1e-09
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 28/174 (16%)

Query: 122 ISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
           +S EE A L PL+V   +   + AG + G T+ ++G  G +G + +  AK +     V  
Sbjct: 1   VSLEEGALLEPLSV--GVHACRRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGA-FVVCT 56

Query: 181 TTSTPKVEFVKELGADKVIDYRKTKY----------EDIEEKFDVLYDTIG---DCKNSF 227
             S  ++E  K  GAD  +     K             I +  +V  D  G         
Sbjct: 57  ARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGI 116

Query: 228 VVAKDNAPIVDITWPPSHP-----RAIYSSLTVSG-----EILEKLRPFIESGK 271
            + +    ++ +             A    + +                + SG+
Sbjct: 117 NITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGR 170

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 54.7 bits (130), Expect = 1e-09
 Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 24/172 (13%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQ-HDQLLVQVRAAALNPIDSKRRQ---RPLFPSDFPA 59
           A    EY   + L++ D   P  +    ++V++  A +   D    Q     L     P 
Sbjct: 2   AARLHEYN--KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPY 59

Query: 60  VPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-----------------G 102
             G +  G +      V     GD V  +    +      +                  G
Sbjct: 60  TLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDG 119

Query: 103 ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFI 154
             AEF+      + K PK++  E        +   +E  +      G+ + I
Sbjct: 120 GFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEKGE-VLGRAVLI 170

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 54.5 bits (130), Expect = 1e-09
 Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 11/138 (7%)

Query: 122 ISFEEAASLPLAVQTAIEG----FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           ++ +EA ++  A  TA        +         + + G  GGVG+L + +     G + 
Sbjct: 1   LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAK-RGYTV 59

Query: 178 VVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE----KFDVLYDTIGD--CKNSFVVAK 231
             +T    + ++++ LGA +V+       E I      ++    D +G           +
Sbjct: 60  EASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMR 119

Query: 232 DNAPIVDITWPPSHPRAI 249
               +             
Sbjct: 120 YGGAVAVSGLTGGAEVPT 137

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 54.5 bits (130), Expect = 1e-09
 Identities = 19/80 (23%), Positives = 28/80 (35%), Gaps = 2/80 (2%)

Query: 126 EAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184
           E+  +     T       TA    G T  + G  GGVG   I   K    +  +   T  
Sbjct: 4   ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHK 62

Query: 185 PKVEFVKELGADKVIDYRKT 204
            K     ELGA + ++ +  
Sbjct: 63  DKFPKAIELGATECLNPKDY 82

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 53.3 bits (127), Expect = 4e-09
 Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 4/97 (4%)

Query: 125 EEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184
            +   L   + T   G  TAG   G T+++  GAG VG      A+    A  +V   + 
Sbjct: 2   RDLTCLSDILPTGYHGAVTAGVGPGSTVYVA-GAGPVGLAAAASARLLGAAVVIVGDLNP 60

Query: 185 PKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221
            ++   K  G +            + E+   L     
Sbjct: 61  ARLAHAKAQGFEIADLSLD---TPLHEQIAALLGEPE 94

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 52.6 bits (125), Expect = 5e-09
 Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 21/169 (12%)

Query: 123 SFEEAASLPLAVQTAIEGFKTAG--FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
              E A L  A  TA    K A      G  +  + G GG+G + +QL K    A+ +  
Sbjct: 5   KLVEMAPLADAGITAYRAVKKAARTLYPGAYV-AIVGVGGLGHIAVQLLKVMTPATVIAL 63

Query: 181 TTSTPKVEFVKELGADKVIDYRK-----TKYEDIEEKFDVLYDTIG---DCKNSFVVAKD 232
                K++  + LGAD V+D R+               +V  D +G       +  +   
Sbjct: 64  DVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGR 123

Query: 233 NAPIV----DITWPPSHPRAIYSSLTVSGEI------LEKLRPFIESGK 271
              ++             R I S ++  G +      L +L      GK
Sbjct: 124 MGRLIIVGYGGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 172

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 52.4 bits (124), Expect = 5e-09
 Identities = 37/170 (21%), Positives = 57/170 (33%), Gaps = 20/170 (11%)

Query: 122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
           +SFEEAA +  A  T  +  K  G K G+ + I G  G     V        G + V   
Sbjct: 1   LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYA--KAMGLNVVAVD 58

Query: 182 TSTPKVEFVKELGADKVIDYRKTKYEDIEEKF--------------DVLYDTIGDCKNSF 227
               K+E  KELGAD V++  K       ++                         +   
Sbjct: 59  IGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGG 118

Query: 228 VVAKDNAPIVDITWPPSHP----RAIYSSLTVSGEILEKLRPFIESGKLK 273
                  P  ++  P          I  S+  + + L++   F   GK+K
Sbjct: 119 ACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVK 168

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 51.9 bits (123), Expect = 9e-09
 Identities = 25/188 (13%), Positives = 50/188 (26%), Gaps = 36/188 (19%)

Query: 4   AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGC 63
            +          L   +   P       +V+  A +    D               + G 
Sbjct: 3   GFAMLGINK---LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGH 59

Query: 64  DMAGIVVAKGTSVTKFNTGD--------------------EVYGNIQDFNAEGKLKQLGA 103
           +  G VV  G+ V  F  GD                    + + N      +    + G 
Sbjct: 60  EAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGV 119

Query: 104 LAEFIVV--EESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVG-GAGG 160
             E+  V   +  +A  PK++   +  +          GF        + + ++      
Sbjct: 120 FGEYFHVNDADMNLAILPKDVDLSKLVT------HVYHGFDHI----EEALLLMKDKPKD 169

Query: 161 VGTLVIQL 168
           +   V+ L
Sbjct: 170 LIKAVVIL 177

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 51.5 bits (122), Expect = 1e-08
 Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 6/141 (4%)

Query: 123 SFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
                A L  A  T     +      G+ + +V G GG+G + I+   H  GA  V  TT
Sbjct: 5   QLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVV-GIGGLGHMGIK-LAHAMGAHVVAFTT 62

Query: 183 STPKVEFVKELGADKVIDYRKT-KYEDIEEKFDVLYDTIGD---CKNSFVVAKDNAPIVD 238
           S  K E  K LGAD+V++ R   +     + FD + +T+       +   + K +  +  
Sbjct: 63  SEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTL 122

Query: 239 ITWPPSHPRAIYSSLTVSGEI 259
           +  P +  ++      +    
Sbjct: 123 VGAPATPHKSPEVFNLIMKRR 143

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 50.4 bits (119), Expect = 2e-08
 Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 20/167 (11%)

Query: 122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
           + F E A +  A  T  +G K    + GQ +  + G GG+G + +Q A+   G       
Sbjct: 1   VEFAEIAPILCAGVTVYKGLKQTNARPGQWV-AISGIGGLGHVAVQYARA-MGLHVAAID 58

Query: 182 TSTPKVEFVKELGADKVIDYRKTKYEDIEEK-------FDVLYDTIGDCKNSFVVAKDNA 234
               K+E  ++LGA   ++ R+    +  ++         V   +      +  +A+   
Sbjct: 59  IDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGG 118

Query: 235 PIVDITWPP-----SHPRAIYSSLTVSGEI------LEKLRPFIESG 270
            I  +  PP          +   L ++G I      L++   F   G
Sbjct: 119 TIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEG 165

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 50.8 bits (120), Expect = 3e-08
 Identities = 27/178 (15%), Positives = 56/178 (31%), Gaps = 29/178 (16%)

Query: 125 EEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS 183
            EAA+  +A  TA     +      G+ + I    GGVG   + +AK      +  A + 
Sbjct: 1   NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 60

Query: 184 TPKVEFVKELGADKVIDYRKTKYEDIEEK-----FDVLYDTIGD-------------CKN 225
             +    +               ++I E       DV+ +++                + 
Sbjct: 61  AKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRF 120

Query: 226 SFVVAKDNAPIVDITWPPSHPRAIYSSLTVSG----------EILEKLRPFIESGKLK 273
             +  KD      +        A +S + +            ++L+ +   +  GKL+
Sbjct: 121 IELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLE 178

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 49.5 bits (117), Expect = 7e-08
 Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 2/82 (2%)

Query: 124 FEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
            E    +     +       TA    G T  + G  G VG   I   K    +  +    
Sbjct: 3   LERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDI 61

Query: 183 STPKVEFVKELGADKVIDYRKT 204
           +  K    K LGA   ++ R+ 
Sbjct: 62  NGEKFPKAKALGATDCLNPREL 83

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.2 bits (116), Expect = 1e-07
 Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 40/189 (21%)

Query: 121 NISFEEAASLPLAVQTAIEG-FKTAGFKTG--QTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           ++S+   A + +   T++ G  +      G  QT+ + G AG  G+L  Q+     G S 
Sbjct: 1   HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLL-GCSR 58

Query: 178 VVATTSTPKVEF--VKELGADKVIDYRKTKYEDIEEK-----FDVLYDTIG--------- 221
           VV    T +       ELG D  ++Y+     +   +      DV +D +G         
Sbjct: 59  VVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVIS 118

Query: 222 ---DCKNSFVVAKDNAPIVDITWPPSHPRAIYS-----SLTVSG-----------EILEK 262
              +  +  +  + +    D+ +PP  P A+ +     ++T                + +
Sbjct: 119 QMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQ 178

Query: 263 LRPFIESGK 271
           L  + + GK
Sbjct: 179 LSQWFKEGK 187

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 2e-07
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 124 FEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
            E+   +     T      KT   K G T  + G  GGVG  VI   K   GAS ++   
Sbjct: 4   PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKS-AGASRIIGID 61

Query: 183 STP-KVEFVKELGADKVIDYRKTK 205
               K E    +GA + I  + + 
Sbjct: 62  LNKDKFEKAMAVGATECISPKDST 85

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 46.6 bits (109), Expect = 6e-07
 Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 21/170 (12%)

Query: 122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
           +S EEAA+ P++  TA    K A  + G+ + +   AG +GT  +Q+A+         A+
Sbjct: 1   LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS 60

Query: 182 TSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC-KNSFVVAKDNAPIVDI- 239
                   +     +        +        D++ +  G   + S  +      +V I 
Sbjct: 61  RPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIG 120

Query: 240 -----TWPPSHPRAIYSSLTVSG--------------EILEKLRPFIESG 270
                  P    R +  +L V G              E L  L P +   
Sbjct: 121 AAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRE 170

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 43.3 bits (101), Expect = 9e-06
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 122 ISFEEAASLPLAVQTAIEGF----KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
           +   +A  +  A  TA+                 I + G +GGVG+  + L     G   
Sbjct: 1   LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHK-LGYQV 59

Query: 178 VVATTSTPKVEFVKELGADKVIDYRKTKYEDI--EEKFDVLYDTIGD 222
           V  +      E++K LGA +V+   +        ++ +    DT+GD
Sbjct: 60  VAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGD 106

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 43.4 bits (101), Expect = 1e-05
 Identities = 29/174 (16%), Positives = 66/174 (37%), Gaps = 24/174 (13%)

Query: 124 FEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
            +  A    +  TA     +      G+T+ I G AG +G   + +A+     + +V   
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG 61

Query: 183 STPKVEFVKELGADKVIDYRKTKYEDIEEK---------FDVLYDTIGDCKN-------- 225
           S  +++  +E+GAD  ++ R+T  E+  +           D + +  GD +         
Sbjct: 62  SPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELL 121

Query: 226 ----SFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQ 275
                + VA    P   + +   +   +  + T  G  +     F+++  + ++
Sbjct: 122 RRGGFYSVAGVAVPQDPVPFKV-YEWLVLKNATFKGIWVSDTSHFVKTVSITSR 174

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 42.7 bits (99), Expect = 1e-05
 Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 136 TAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG 194
            ++   +  G      ++ + G  GGVG + + +     G   V +T +    +++K+LG
Sbjct: 10  LSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNK-RGYDVVASTGNREAADYLKQLG 68

Query: 195 ADKVIDYR----KTKYEDIEEKFDVLYDTIG 221
           A +VI        T     ++++    D +G
Sbjct: 69  ASEVISREDVYDGTLKALSKQQWQGAVDPVG 99

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 2e-05
 Identities = 7/34 (20%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 122 ISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFI 154
           + F++ A++ +   TA      +A  K G+++ +
Sbjct: 1   LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLV 34

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 38.1 bits (87), Expect = 6e-04
 Identities = 36/177 (20%), Positives = 65/177 (36%), Gaps = 34/177 (19%)

Query: 127 AASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP 185
             ++ +   TA  G  +  G K G+T+ +   AG VG++V Q+AK   G   V A  S  
Sbjct: 7   LGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKL-KGCKVVGAAGSDE 65

Query: 186 KVEFVKELGADKVIDYR------KTKYEDIEEKFDVLYDTIGD--------------CKN 225
           K+ ++K++G D   +Y+      +   +   + +D  +D +G                  
Sbjct: 66  KIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIA 125

Query: 226 SFVVAKDNAPIVDITWPPSHPRAIYSSLTVSG------------EILEKLRPFIESG 270
                     +  +   PS    IY  L + G            + L  L  ++  G
Sbjct: 126 ICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEG 182

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 146 FKTGQTIFIVGGAGGVG-TLVIQLAKHFYGASHVVATT-STPKVEFVKELGAD 196
           +K   T+ + GG GGVG  +   LA+   GA H++  + S P  +   EL A+
Sbjct: 6   WKPTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAE 56

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	327
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.97
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.97
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.96
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.96
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.96
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.96
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.96
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.96
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.94
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.94
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.93
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.93
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.93
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.93
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.87
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.87
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.86
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.86
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.86
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.85
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.85
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.84
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.84
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.84
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.84
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.83
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.82
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.82
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.82
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.81
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.81
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.81
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.8
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.8
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.79
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.77
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.77
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.76
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.75
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.74
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.73
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.7
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.68
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.65
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.47
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.8
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.76
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.52
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.29
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.23
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.17
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.1
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.1
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.08
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.04
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.01
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.95
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.93
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.91
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.85
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.84
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.83
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	96.82
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.8
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.8
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.78
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.77
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.75
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.71
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.7
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.67
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.66
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.66
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.63
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.63
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.6
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.58
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.57
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.57
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.56
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.55
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.54
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.53
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	96.51
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.47
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.45
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.45
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.45
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.44
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.44
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.42
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.41
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.36
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.33
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.3
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.29
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.26
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.2
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.16
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.11
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.06
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.05
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	95.87
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.85
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	95.83
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	95.82
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.81
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.77
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	95.77
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	95.74
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.66
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.63
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.62
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	95.58
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	95.54
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	95.53
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.52
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.44
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	95.44
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	95.37
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.25
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.14
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.11
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.02
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.0
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	94.81
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	94.71
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.64
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.59
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.58
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	94.51
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.47
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.44
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	94.42
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	94.38
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	94.32
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	94.3
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.25
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.19
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	94.17
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.14
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.12
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.1
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.08
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	94.05
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	93.99
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.9
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	93.86
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	93.8
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	93.77
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.76
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	93.73
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.48
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.4
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.21
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	93.06
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	92.96
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	92.73
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	92.71
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	92.59
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	92.56
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.38
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	92.26
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	92.22
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	92.16
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.09
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.08
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	92.03
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	91.95
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	91.93
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.66
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	91.65
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	91.58
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	91.55
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	91.37
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	91.32
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	91.2
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	91.18
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	90.89
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	90.81
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	90.8
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	90.71
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	90.55
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.45
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	90.35
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	90.29
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.26
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.26
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	90.21
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.15
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	90.11
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	89.84
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.62
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	89.2
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.09
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.08
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	88.94
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	88.81
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	88.66
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	88.59
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	88.59
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	88.21
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	88.06
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	87.93
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	87.84
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	87.68
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	87.63
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	87.32
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.21
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	87.11
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	86.99
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	86.98
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	86.9
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	86.67
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	86.61
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	86.49
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	86.49
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	86.05
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	85.96
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	85.9
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	85.87
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	85.86
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	85.81
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	85.78
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.74
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	85.63
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	85.47
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	85.47
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	85.45
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	85.18
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	85.13
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	84.97
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	84.97
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	84.92
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.86
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	84.77
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	84.35
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	84.17
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	83.91
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	83.71
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	83.5
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	83.36
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	83.24
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	83.18
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	82.96
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.86
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	82.73
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	82.68
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	82.63
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.47
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	82.41
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	82.33
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	82.32
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	82.3
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	82.3
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.25
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	82.22
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	82.12
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	81.95
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	81.93
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	81.76
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	81.73
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	81.68
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.49
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	81.38
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	81.23
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	81.07
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	80.97
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	80.85
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	80.85
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	80.75
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	80.61
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	80.43
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	80.25
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	80.08
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	80.03

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.1e-31  Score=206.38  Aligned_cols=146  Identities=27%  Similarity=0.464  Sum_probs=133.2

Q ss_pred             CceeEEecccCCCcceEEe-eccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLG-DFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~-~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      +||+++++++|+++.+++. +.|.|.+++|||||||.+++||++|++.++|.++ ...+|.++|||++|+|+++|+++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            4999999999998889986 6899999999999999999999999999988774 3567899999999999999999999


Q ss_pred             CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEE
Q 020320           79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIV  155 (327)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~  155 (327)
                      |++||||++...         ..|+|+||++++++.++++|+++++++|+.++++..|+|+++ ..+....|+++||+
T Consensus        82 ~~vGdrV~~~~~---------~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          82 FKKGDRVFTSST---------ISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             CCTTCEEEESCC---------SSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             cccCcccccccc---------ccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            999999998653         469999999999999999999999999999999999999987 46888999999874

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.97  E-value=2.5e-31  Score=214.68  Aligned_cols=155  Identities=23%  Similarity=0.324  Sum_probs=131.8

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      +|+++ +..+++   |+++++|.|+++++|||||+.+++||++|++.+.+..   ....+|.++|||++|+|+++|++++
T Consensus         2 ~maAV-l~g~~~---l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~   77 (178)
T d1e3ja1           2 NLSAV-LYKQND---LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK   77 (178)
T ss_dssp             CEEEE-EEETTE---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred             ceEEE-EEcCCc---EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccC
Confidence            35555 445555   9999999999999999999999999999999887643   2345789999999999999999999


Q ss_pred             CCCCCCEEEEecc------------ccccc------CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHH
Q 020320           78 KFNTGDEVYGNIQ------------DFNAE------GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIE  139 (327)
Q Consensus        78 ~~~~Gd~V~~~~~------------~~~~~------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~  139 (327)
                      ++++||||+....            ..+.|      +....+|+|+||+.+++++++++|++++++++++++.++.|+|+
T Consensus        78 ~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~  157 (178)
T d1e3ja1          78 HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD  157 (178)
T ss_dssp             SCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHH
T ss_pred             CCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHH
Confidence            9999999986432            12222      23356799999999999999999999999999999888899999


Q ss_pred             HHHhcCCCCCCEEEEEcCCc
Q 020320          140 GFKTAGFKTGQTIFIVGGAG  159 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g  159 (327)
                      +++.+++++|++|+|+|||.
T Consensus       158 a~~~~~~~~g~~VlVig~C~  177 (178)
T d1e3ja1         158 AFEAARKKADNTIKVMISCR  177 (178)
T ss_dssp             HHHHHHHCCTTCSEEEEECC
T ss_pred             HHHHhCCCCCCEEEEEcccc
Confidence            99999999999999999774

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.1e-29  Score=198.27  Aligned_cols=143  Identities=24%  Similarity=0.340  Sum_probs=129.4

Q ss_pred             eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTG   82 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   82 (327)
                      +++.|+++|.++.|++++.+.|.+++|||+||+.+++||++|++.++|.++...+|.++|||++|+|+++|++++++++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG   81 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG   81 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence            57899999999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             CEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhh--cccchHHHHHHHHHHhcCCCCCCEEEE
Q 020320           83 DEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEA--ASLPLAVQTAIEGFKTAGFKTGQTIFI  154 (327)
Q Consensus        83 d~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a--a~~~~~~~ta~~~l~~~~~~~~~~vlI  154 (327)
                      |||+....         ..|+|+||++++.+.++++|++++++.+  +.++....++++++...++++|++|||
T Consensus        82 drV~~~~~---------~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~~~~~~G~~VLI  146 (147)
T d1qora1          82 DRVVYAQS---------ALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI  146 (147)
T ss_dssp             CEEEESCC---------SSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEE
T ss_pred             ceeeeecc---------ccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEe
Confidence            99976432         4689999999999999999999987644  445777778888887788999999998

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.1e-29  Score=206.41  Aligned_cols=156  Identities=15%  Similarity=0.122  Sum_probs=135.2

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCC-CCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSV-TKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v-~~~   79 (327)
                      |||++++..+++...+++.+.+.++++++|||||+.+++||++|++.+.|.++...+|+++|||++|+|+++|+++ +.+
T Consensus         6 ~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v~~~~   85 (192)
T d1piwa1           6 KFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGL   85 (192)
T ss_dssp             CEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCCSSC
T ss_pred             eeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccccccccc
Confidence            7999999999988778888888788899999999999999999999999988878899999999999999999987 679


Q ss_pred             CCCCEEEEec-------------ccccccC------------cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHH
Q 020320           80 NTGDEVYGNI-------------QDFNAEG------------KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAV  134 (327)
Q Consensus        80 ~~Gd~V~~~~-------------~~~~~~~------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~  134 (327)
                      ++||||....             +..+.|.            +...+|+|+||+++++.+++++|++++++.|+++..++
T Consensus        86 k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~~~~  165 (192)
T d1piwa1          86 KVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGV  165 (192)
T ss_dssp             CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSHHHH
T ss_pred             CCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHHHHHH
Confidence            9999996332             1223332            34467999999999999999999999998887766667


Q ss_pred             HHHHHHHHhcCCCCCCEEEEEc
Q 020320          135 QTAIEGFKTAGFKTGQTIFIVG  156 (327)
Q Consensus       135 ~ta~~~l~~~~~~~~~~vlI~g  156 (327)
                      .|||+++++++++++++|+|..
T Consensus       166 ~ta~~~l~~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         166 HEAFERMEKGDVRYRFTLVGYD  187 (192)
T ss_dssp             HHHHHHHHHTCCSSEEEEECCH
T ss_pred             HHHHHHHHHhCCCCCCEEEEEC
Confidence            8999999999999999999863

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=2.4e-29  Score=202.52  Aligned_cols=152  Identities=20%  Similarity=0.298  Sum_probs=131.1

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||+++++++|++  ++++++|.|.+++||||||+.+++||++|++.++|.++ ...+|.++|||++|+|+++|++++++
T Consensus         5 tMkA~v~~~~g~p--l~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~~   82 (175)
T d1llua1           5 TMKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRV   82 (175)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSC
T ss_pred             hcEEEEEEeCCCC--CEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCcccc
Confidence            6999999999876  99999999999999999999999999999999999874 45789999999999999999999999


Q ss_pred             CCCCEEEEecc-------------ccccc-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320           80 NTGDEVYGNIQ-------------DFNAE-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF  141 (327)
Q Consensus        80 ~~Gd~V~~~~~-------------~~~~~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  141 (327)
                      ++||||+....             ..+.|     .+...+|+|+||+.+++++++++|++++++.++.+..++.++++++
T Consensus        83 ~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~~  162 (175)
T d1llua1          83 KEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM  162 (175)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHHH
T ss_pred             ccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHHH
Confidence            99999975321             12222     2345678999999999999999999999988888888888999888


Q ss_pred             HhcCCCCCCEEEEE
Q 020320          142 KTAGFKTGQTIFIV  155 (327)
Q Consensus       142 ~~~~~~~~~~vlI~  155 (327)
                      +... .+|++|||+
T Consensus       163 ~~g~-~~G~~VLVl  175 (175)
T d1llua1         163 RAGQ-IEGRIVLEM  175 (175)
T ss_dssp             HTTC-CSSEEEEEC
T ss_pred             HhCC-CCCCEEEeC
Confidence            6554 479999984

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=1.1e-28  Score=197.94  Aligned_cols=150  Identities=20%  Similarity=0.286  Sum_probs=125.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC-CCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++++++++  |+++++|.|.+++||||||+++++||++|++.+++.. ....+|.++|||++|+|+++|+++++++
T Consensus         1 MkA~v~~~~g~p--l~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~   78 (171)
T d1rjwa1           1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (171)
T ss_dssp             CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEecCCCC--cEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCce
Confidence            999999998865  9999999999999999999999999999999887654 4567899999999999999999999999


Q ss_pred             CCCEEEEecc-------------ccccc-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH
Q 020320           81 TGDEVYGNIQ-------------DFNAE-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK  142 (327)
Q Consensus        81 ~Gd~V~~~~~-------------~~~~~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~  142 (327)
                      +||||.....             ..+.|     .+...+|+|+||+++++++++++|++++++.|++.  .+.++++++.
T Consensus        79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~l~--~~~~~~~~~~  156 (171)
T d1rjwa1          79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLE--KINEVFDRML  156 (171)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEEGG--GHHHHHHHHH
T ss_pred             eeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHHHH--HHHHHHHHHH
Confidence            9999975321             11112     23456799999999999999999999998766543  3456888876


Q ss_pred             hcCCCCCCEEEEEc
Q 020320          143 TAGFKTGQTIFIVG  156 (327)
Q Consensus       143 ~~~~~~~~~vlI~g  156 (327)
                      .+.+ +|++|||+|
T Consensus       157 ~~~~-~G~tVlViG  169 (171)
T d1rjwa1         157 KGQI-NGRVVLTLE  169 (171)
T ss_dssp             TTCC-SSEEEEECC
T ss_pred             hcCC-CCCEEEEeC
Confidence            6665 599999988

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.96  E-value=8.2e-29  Score=198.15  Aligned_cols=149  Identities=19%  Similarity=0.244  Sum_probs=130.3

Q ss_pred             eeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320            3 NAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK   78 (327)
Q Consensus         3 ~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   78 (327)
                      |++++.++|.+  |++++++.|.+ ++||||||+.+++||++|++.+.|.++   ...+|.++|||++|+|+++|+++++
T Consensus         1 kA~~~~~~g~p--l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~   78 (171)
T d1h2ba1           1 KAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEG   78 (171)
T ss_dssp             CEEEESSTTSC--CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred             CEEEEEeCCCC--CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCc
Confidence            78999999976  99999999986 689999999999999999999988762   3467999999999999999999999


Q ss_pred             CCCCCEEEEeccc------------cccc-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320           79 FNTGDEVYGNIQD------------FNAE-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF  141 (327)
Q Consensus        79 ~~~Gd~V~~~~~~------------~~~~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  141 (327)
                      +++||||+.....            .+.|     .+...+|+|+||+.+++++++++|++++++.+++++.++.|+|+++
T Consensus        79 ~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al  158 (171)
T d1h2ba1          79 LEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL  158 (171)
T ss_dssp             CCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHH
T ss_pred             CCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHH
Confidence            9999999875431            2223     2345679999999999999999999999988888888899999999


Q ss_pred             HhcCCCCCCEEEE
Q 020320          142 KTAGFKTGQTIFI  154 (327)
Q Consensus       142 ~~~~~~~~~~vlI  154 (327)
                      +.+.+ .|++|||
T Consensus       159 ~~~~~-~G~~VlI  170 (171)
T d1h2ba1         159 EKGEV-LGRAVLI  170 (171)
T ss_dssp             HTTCC-SSEEEEE
T ss_pred             HhcCC-CCCEEEe
Confidence            88888 8999998

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.96  E-value=4.2e-29  Score=204.81  Aligned_cols=153  Identities=19%  Similarity=0.240  Sum_probs=133.1

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |+|++++.+++.+  |+++|++.|.|++||||||+.+++||++|++.+.+......+|.++|||++|+|+++|+++++++
T Consensus         8 ~~kAav~~~~~~p--l~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~~~   85 (199)
T d1cdoa1           8 KCKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQ   85 (199)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEEecCCCC--cEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCceec
Confidence            4679999888765  99999999999999999999999999999999999877778999999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCc--------------------------CCCCCceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGK--------------------------LKQLGALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~--------------------------~~~~g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||||+....            ..+.|..                          ....|+|+||+++++.+++++|+++
T Consensus        86 ~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~  165 (199)
T d1cdoa1          86 PGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSV  165 (199)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECCCCC
Confidence            9999986532            1222311                          0124999999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEE
Q 020320          123 SFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIV  155 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~  155 (327)
                      ++++++++..++.|+++++.. .+.+.|++|||+
T Consensus       166 ~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         166 KLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             CCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999998888999999964 678899999984

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.2e-29  Score=201.55  Aligned_cols=153  Identities=23%  Similarity=0.336  Sum_probs=128.3

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      +|.++|++.+++   |+++++|.|+++++||||||.+++||++|++.+++..   ....+|.++|||++|+|+++|++++
T Consensus         7 ~~~a~V~~gp~~---l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~   83 (185)
T d1pl8a1           7 NNLSLVVHGPGD---LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (185)
T ss_dssp             CCEEEEEEETTE---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             CCEEEEEeCCCe---EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEecccee
Confidence            468999998876   9999999999999999999999999999999987543   2346789999999999999999999


Q ss_pred             CCCCCCEEEEecc------------ccccc------CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHH
Q 020320           78 KFNTGDEVYGNIQ------------DFNAE------GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIE  139 (327)
Q Consensus        78 ~~~~Gd~V~~~~~------------~~~~~------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~  139 (327)
                      ++++||||+....            .++.|      +....+|+|+||+++++++++++|++++++++++++++  ++++
T Consensus        84 ~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~pl~--~a~~  161 (185)
T d1pl8a1          84 HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLE--KALE  161 (185)
T ss_dssp             SCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEEGG--GHHH
T ss_pred             eecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHHHH--HHHH
Confidence            9999999986432            12222      23346789999999999999999999999999877654  4778


Q ss_pred             HHHhcCCCCCCEEEEEcCCch
Q 020320          140 GFKTAGFKTGQTIFIVGGAGG  160 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~  160 (327)
                      +++..++++|++|+| | +|+
T Consensus       162 a~~~~~~~~G~~VlI-g-~GP  180 (185)
T d1pl8a1         162 AFETFKKGLGLKIML-K-CDP  180 (185)
T ss_dssp             HHHHHHTTCCSEEEE-E-CCT
T ss_pred             HHHHhCCCCCCEEEE-E-eCC
Confidence            888888899999998 5 554

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=8.1e-29  Score=202.41  Aligned_cols=153  Identities=23%  Similarity=0.232  Sum_probs=131.6

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||||+++.++|.+  |+++++|.|+|+++||||||.+++||++|++.+.|.+....+|.++|||++|+|+++|++++.++
T Consensus         6 ~~kAav~~~~g~~--l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~~   83 (197)
T d2fzwa1           6 KCKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLK   83 (197)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             EEEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceecC
Confidence            6899999999886  99999999999999999999999999999999999887778999999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCc--------------------------CCCCCceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGK--------------------------LKQLGALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~--------------------------~~~~g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||||+....            ..+.|..                          ....|+|+||+++++..++++|+++
T Consensus        84 ~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~l  163 (197)
T d2fzwa1          84 AGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLI  163 (197)
T ss_dssp             TTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCCCC
Confidence            9999986432            1122210                          1124899999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEE
Q 020320          123 SFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIV  155 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~  155 (327)
                      ++++++.+++++.+++.++.. ..-+.+++|||+
T Consensus       164 ~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         164 KVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             CSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999999899999999854 334678888873

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=2.1e-28  Score=201.39  Aligned_cols=151  Identities=24%  Similarity=0.324  Sum_probs=127.8

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++.+++.+  |+++|+|.|.|+++||||||.+++||++|++.++|.++ ..+|.++|||++|+|+++|+++++++
T Consensus         8 ~~KAaV~~~~g~p--l~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V~~~~   84 (202)
T d1e3ia1           8 KCKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVTNFK   84 (202)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             EEEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCceecc
Confidence            6899999999876  99999999999999999999999999999999988764 46799999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCcC------------------------------CCCCceeeEEEeeccceecC
Q 020320           81 TGDEVYGNIQ------------DFNAEGKL------------------------------KQLGALAEFIVVEESLIAKK  118 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~~------------------------------~~~g~~~~~~~v~~~~~~~~  118 (327)
                      +||||+....            ..+.|...                              ...|+|+||+++++..++++
T Consensus        85 ~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~~l  164 (202)
T d1e3ia1          85 PGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARV  164 (202)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhEEEC
Confidence            9999986532            12333211                              12489999999999999999


Q ss_pred             CCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEc
Q 020320          119 PKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVG  156 (327)
Q Consensus       119 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~g  156 (327)
                      |++++++.++++.+++.++++++..  +++|++|.|..
T Consensus       165 P~~~~~~~~~~~~~~~~~~~~a~~~--~k~G~~V~vi~  200 (202)
T d1e3ia1         165 DDEFDLDLLVTHALPFESINDAIDL--MKEGKSIRTIL  200 (202)
T ss_dssp             CTTSCGGGGEEEEEEGGGHHHHHHH--HHTTCCSEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEEE
Confidence            9999999888887777778888754  35788887764

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.95  E-value=1.1e-27  Score=195.02  Aligned_cols=152  Identities=21%  Similarity=0.246  Sum_probs=126.3

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      +|+++++...+.+  |+++++|.|+|++||||||+.+++||++|++.+.|.++ .++|.++|||++|+|+++|+++++++
T Consensus         3 ~~~Aav~~~~g~~--l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~~   79 (194)
T d1f8fa1           3 DIIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   79 (194)
T ss_dssp             EEEEEEBCSTTCC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             eeEEEEEcCCCCC--cEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeEc
Confidence            5889999988866  99999999999999999999999999999999998865 46899999999999999999999999


Q ss_pred             CCCEEEEecc-----------cccccCc----------------------------CCCCCceeeEEEeeccceecCCCC
Q 020320           81 TGDEVYGNIQ-----------DFNAEGK----------------------------LKQLGALAEFIVVEESLIAKKPKN  121 (327)
Q Consensus        81 ~Gd~V~~~~~-----------~~~~~~~----------------------------~~~~g~~~~~~~v~~~~~~~~p~~  121 (327)
                      +||||+....           .++.|..                            ....|+|+||.+++..+++++|++
T Consensus        80 vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~  159 (194)
T d1f8fa1          80 VGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD  159 (194)
T ss_dssp             TTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred             cCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC
Confidence            9999975322           1222211                            012378999999999999999998


Q ss_pred             CCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe
Q 020320          122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT  181 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~  181 (327)
                      +++++++                        ++.| +|++|++++|+++.+ +.+.++++
T Consensus       160 i~~~~~~------------------------~i~g-~g~~g~~aiq~a~~~-g~~~iiaV  193 (194)
T d1f8fa1         160 FPFDQLV------------------------KFYA-FDEINQAAIDSRKGI-TLKPIIKI  193 (194)
T ss_dssp             CCGGGGE------------------------EEEE-GGGHHHHHHHHHHTS-CSEEEEEC
T ss_pred             CCcccEE------------------------EEeC-cHHHHHHHHHHHHHc-CCCEEEEe
Confidence            8866543                        3445 899999999999999 87776654

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=7.5e-28  Score=188.84  Aligned_cols=148  Identities=20%  Similarity=0.296  Sum_probs=126.7

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      |||++++++++++..+++++++.|++++|||||||.+++||++|++.+.+.++ ...+|.++|||++|+|++  .+++.+
T Consensus         3 ~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~   80 (152)
T d1xa0a1           3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRF   80 (152)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSC
T ss_pred             ceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCcc
Confidence            68999999999887788999999999999999999999999999988887764 456899999999999998  556789


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEc
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVG  156 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~g  156 (327)
                      ++||+|++.....    +...+|+|+||++++++.++++|++++ .+|+.++++.+|+|.++ .+.+++ |++|||+|
T Consensus        81 ~~g~~v~~~~~~~----~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          81 REGDEVIATGYEI----GVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             CTTCEEEEESTTB----TTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             ccCCEEEEecCcc----ccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            9999999875432    223579999999999999999999997 46777888877888777 467775 99999975

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=2e-27  Score=180.68  Aligned_cols=130  Identities=23%  Similarity=0.380  Sum_probs=117.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||+++++++|++  +++++++.|.+++|||+||+.+++||++|++...|.++ ...+|+++|||++|+|           
T Consensus         1 MkA~~~~~~G~~--l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------   67 (131)
T ss_dssp             CEEEEECSTTSC--EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------
T ss_pred             CcEEEEccCCCC--CEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------
Confidence            999999999876  99999999999999999999999999999999998874 3578999999999999           


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEE
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIV  155 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~  155 (327)
                      +||+|+++.          .+|+|+||+++++++++++|+++++++|++++.++.|||+++.+.. +.|++||++
T Consensus        68 vGd~V~~~~----------~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g-~~g~tvl~l  131 (131)
T d1iz0a1          68 EGRRYAALV----------PQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG-HTGKVVVRL  131 (131)
T ss_dssp             TTEEEEEEC----------SSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT-CCBEEEEEC
T ss_pred             ccceEEEEe----------ccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc-cCCCEEEEC
Confidence            399999886          4799999999999999999999999999999999999999995422 568988863

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=1.7e-27  Score=191.67  Aligned_cols=148  Identities=18%  Similarity=0.192  Sum_probs=124.2

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCC---
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVT---   77 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~---   77 (327)
                      |||++++++++.+  |++++++.|.++++||||||.+++||++|++.++|.++...+|.++|||++|+|+++|++++   
T Consensus         4 k~kA~v~~~~~~p--l~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~   81 (184)
T d1vj0a1           4 KAHAMVLEKFNQP--LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLN   81 (184)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTT
T ss_pred             eEEEEEEecCCCC--cEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEeccccccc
Confidence            5899999999876  99999999999999999999999999999999999887778999999999999999999986   


Q ss_pred             --CCCCCCEEEEecc------------c-ccccC-------------cCCCCCceeeEEEee-ccceecCCCCCCHHhhc
Q 020320           78 --KFNTGDEVYGNIQ------------D-FNAEG-------------KLKQLGALAEFIVVE-ESLIAKKPKNISFEEAA  128 (327)
Q Consensus        78 --~~~~Gd~V~~~~~------------~-~~~~~-------------~~~~~g~~~~~~~v~-~~~~~~~p~~~~~~~aa  128 (327)
                        .+++||+|+....            . .+.|.             ....+|+|+||+.++ +.+++++|++++.++  
T Consensus        82 ~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~--  159 (184)
T d1vj0a1          82 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL--  159 (184)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEE--
T ss_pred             cccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHHH--
Confidence              4689999986432            1 12221             113479999999995 578999999998653  


Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEEc
Q 020320          129 SLPLAVQTAIEGFKTAGFKTGQTIFIVG  156 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~~~~~~~vlI~g  156 (327)
                        |+  .+|+++++.+++++|++|+|+.
T Consensus       160 --pl--~~A~~a~~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         160 --PL--KEANKALELMESREALKVILYP  183 (184)
T ss_dssp             --EG--GGHHHHHHHHHHTSCSCEEEEC
T ss_pred             --HH--HHHHHHHHHhCCCcCCEEEEee
Confidence              22  3488899999999999999984

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=7.2e-27  Score=188.19  Aligned_cols=150  Identities=23%  Similarity=0.286  Sum_probs=122.1

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC--------CCCCCCcccccccEEEEEeC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF--------PSDFPAVPGCDMAGIVVAKG   73 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~--------~~~~p~~~G~e~~G~V~~vG   73 (327)
                      |||++++++|++  |+++++|.|++++|||+||+.+++||++|++.++|.++        ...+|+++|||++|+|+++|
T Consensus         1 MKA~~~~~~G~p--l~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g   78 (177)
T d1jvba1           1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG   78 (177)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred             CeEEEEEeCCCC--CEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeec
Confidence            999999999876  99999999999999999999999999999999988652        34689999999999999999


Q ss_pred             CCCCCCCCCCEEEEecc------------cccccC-----cCCCCCceeeEEEeeccc-eecCCCCCCHHhhcccchHHH
Q 020320           74 TSVTKFNTGDEVYGNIQ------------DFNAEG-----KLKQLGALAEFIVVEESL-IAKKPKNISFEEAASLPLAVQ  135 (327)
Q Consensus        74 ~~v~~~~~Gd~V~~~~~------------~~~~~~-----~~~~~g~~~~~~~v~~~~-~~~~p~~~~~~~aa~~~~~~~  135 (327)
                      ++++++++||||+....            .++.|.     +...+|+|+||+++++.. ++++|+..+.+.|+....++.
T Consensus        79 ~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~  158 (177)
T d1jvba1          79 DEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEAN  158 (177)
T ss_dssp             TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHH
T ss_pred             cCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHH
Confidence            99999999999986532            122332     234679999999997654 556655545444444456778


Q ss_pred             HHHHHHHhcCCCCCCEEEE
Q 020320          136 TAIEGFKTAGFKTGQTIFI  154 (327)
Q Consensus       136 ta~~~l~~~~~~~~~~vlI  154 (327)
                      ++++++...+. .|++|||
T Consensus       159 ~a~~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         159 EAIDNLENFKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHHHTTCC-CSEEEEE
T ss_pred             HHHHHHHhhcc-cCCceEC
Confidence            89999988887 5899987

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.94  E-value=9.4e-29  Score=198.16  Aligned_cols=126  Identities=17%  Similarity=0.157  Sum_probs=107.5

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      ||++++..+++   +++.|.|.|.++++|||||+.+++||++|++.+.+.....++|+++|||++|+|+++|++++++++
T Consensus         1 MKa~v~~~~~~---l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~v   77 (177)
T d1jqba1           1 MKGFAMLGINK---LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKP   77 (177)
T ss_dssp             CEEEEEEETTE---EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEeCCC---eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecC
Confidence            99999999887   999999999999999999999999999999887666666678999999999999999999999999


Q ss_pred             CCEEEEecc------------cccccC--------cCCCCCceeeEEEeec--cceecCCCCCCHHhhccc
Q 020320           82 GDEVYGNIQ------------DFNAEG--------KLKQLGALAEFIVVEE--SLIAKKPKNISFEEAASL  130 (327)
Q Consensus        82 Gd~V~~~~~------------~~~~~~--------~~~~~g~~~~~~~v~~--~~~~~~p~~~~~~~aa~~  130 (327)
                      ||||+....            ..+.|.        +...+|+|+||+++|.  .+++++|+++++++++..
T Consensus        78 GdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~  148 (177)
T d1jqba1          78 GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTH  148 (177)
T ss_dssp             TCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEE
T ss_pred             CCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHH
Confidence            999985321            122231        2246799999999985  479999999999887654

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.94  E-value=2.8e-29  Score=205.40  Aligned_cols=164  Identities=20%  Similarity=0.209  Sum_probs=131.4

Q ss_pred             ceeEEecccCCCcceEEeeccCCCC-------CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTP-------QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGT   74 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~-------~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~   74 (327)
                      +|+++++.+++   ++++|+|.|.+       ++|||+||+.+++||++|++.++|.++ ..+|.++|||++|+|+++|+
T Consensus         2 ~kA~v~~~~~~---le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~   77 (201)
T d1kola1           2 NRGVVYLGSGK---VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGR   77 (201)
T ss_dssp             EEEEEEEETTE---EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECT
T ss_pred             cEEEEEeCCCc---eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeecccc
Confidence            69999999886   99999999875       469999999999999999999998764 57899999999999999999


Q ss_pred             CCCCCCCCCEEEEecc------------cccccC---------------cCCCCCceeeEEEeec--cceecCCCCCCHH
Q 020320           75 SVTKFNTGDEVYGNIQ------------DFNAEG---------------KLKQLGALAEFIVVEE--SLIAKKPKNISFE  125 (327)
Q Consensus        75 ~v~~~~~Gd~V~~~~~------------~~~~~~---------------~~~~~g~~~~~~~v~~--~~~~~~p~~~~~~  125 (327)
                      +++++++||||.....            ..+.|.               ....+|+|+||+++|.  .+++++|++..+.
T Consensus        78 ~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~  157 (201)
T d1kola1          78 DVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAM  157 (201)
T ss_dssp             TCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHH
T ss_pred             ccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChH
Confidence            9999999999974321            112221               1134689999999975  3799999987777


Q ss_pred             hhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC
Q 020320          126 EAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA  175 (327)
Q Consensus       126 ~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~  175 (327)
                      +++++...+.++++++...+.+.++    +| +|++|+.++|+||.+ |+
T Consensus       158 ~~~~~~~~~~~~~~a~~~~~~~~g~----~g-~G~vG~~~i~~ak~~-GA  201 (201)
T d1kola1         158 EKINIAEVVGVQVISLDDAPRGYGE----FD-AGVPKKFVIDPHKTF-SA  201 (201)
T ss_dssp             HTCCHHHHHTEEEECGGGHHHHHHH----HH-HTCSCEEEECTTCSS-CC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeE----Ee-eCHHHHHHHHHHHHc-CC
Confidence            7777766666677777655544443    46 899999999999987 64

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.93  E-value=7.9e-27  Score=190.67  Aligned_cols=150  Identities=22%  Similarity=0.250  Sum_probs=120.8

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++..++++  |+++|+|.|+|+++||||||.+++||+||++.+.|.++ ..+|.++|||++|+|+++|+++++++
T Consensus         8 ~~KAav~~~~g~~--l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~-~~~P~i~GHE~~G~Vv~~G~~v~~~~   84 (198)
T d1p0fa1           8 TCKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTCVK   84 (198)
T ss_dssp             EEEEEEBSSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc-cccccccceeeeeeeeecCcccccCc
Confidence            7999999998765  99999999999999999999999999999999998765 46899999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCc--------------------------CCCCCceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGK--------------------------LKQLGALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~--------------------------~~~~g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||||+....            ..+.|..                          ....|+|+||..+++..++++|+++
T Consensus        85 ~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~~  164 (198)
T d1p0fa1          85 PGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKI  164 (198)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTS
T ss_pred             CCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCCC
Confidence            9999986432            2233310                          1124789999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHH
Q 020320          123 SFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGT  163 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~  163 (327)
                      +++.++...+++.+...         ++.|+|.| +|++|+
T Consensus       165 ~~~~~~~~~~~~~~v~~---------~~~vlv~G-~G~iGl  195 (198)
T d1p0fa1         165 NVNFLVSTKLTLDQINK---------AFELLSSG-QGVRSI  195 (198)
T ss_dssp             CGGGGEEEEECGGGHHH---------HHHHTTTS-SCSEEE
T ss_pred             CHHHHHHhhcchhhcCC---------CCEEEEEC-CCcceE
Confidence            98877655554433332         23466767 777765

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.4e-25  Score=173.89  Aligned_cols=134  Identities=20%  Similarity=0.181  Sum_probs=115.0

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      ||++++++++.+..+++++++.|++++|||+|||.+++||++|+....|.++ ...+|.++|+|++|+|+++|.+  .++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~~--~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDP--RFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECST--TCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeeccC--Ccc
Confidence            9999999999988899999999999999999999999999999998888764 3568999999999999998764  699


Q ss_pred             CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320           81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF  141 (327)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  141 (327)
                      +||+|++.....    +...+|+|+||+++++++++++|+++++++||+++++..||+..+
T Consensus        79 ~g~~v~~~~~~~----g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          79 AGQEVLLTGWGV----GENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             TTCEEEEECTTB----TTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             ceeeEEeecccc----eecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999865322    223579999999999999999999999999999998877775444

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=2e-25  Score=179.03  Aligned_cols=142  Identities=20%  Similarity=0.158  Sum_probs=115.6

Q ss_pred             ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320            2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT   81 (327)
Q Consensus         2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   81 (327)
                      |||++...++++  |+++|+|.|+|++||||||+.+++||++|++.+.|..+...+|.++|||++|+|+++|++|+++++
T Consensus         1 m~a~~~~~~~~p--l~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~v   78 (179)
T d1uufa1           1 IKAVGAYSAKQP--LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAP   78 (179)
T ss_dssp             CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEccCCCC--CEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCC
Confidence            899999888776  999999999999999999999999999999999998877889999999999999999999999999


Q ss_pred             CCEEEEecc-------------cccccCc-------------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHH
Q 020320           82 GDEVYGNIQ-------------DFNAEGK-------------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQ  135 (327)
Q Consensus        82 Gd~V~~~~~-------------~~~~~~~-------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  135 (327)
                      ||+|.....             ..+.|..             ....|+|+||+++++++++++|+.....   .+...+.
T Consensus        79 GdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~---~~a~~l~  155 (179)
T d1uufa1          79 GDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEM---IRADQIN  155 (179)
T ss_dssp             TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEE---ECGGGHH
T ss_pred             CCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcCh---hHhchhH
Confidence            999964321             1223311             1245899999999999999998654322   1223456


Q ss_pred             HHHHHHHhcCCCC
Q 020320          136 TAIEGFKTAGFKT  148 (327)
Q Consensus       136 ta~~~l~~~~~~~  148 (327)
                      ++++++.++.++-
T Consensus       156 ~a~~a~~~a~v~~  168 (179)
T d1uufa1         156 EAYERMLRGDVKY  168 (179)
T ss_dssp             HHHHHHHTTCSSS
T ss_pred             HHHHHHHHhCccc
Confidence            7899887776543

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=3.4e-28  Score=192.88  Aligned_cols=154  Identities=21%  Similarity=0.232  Sum_probs=132.7

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF   79 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   79 (327)
                      +||+++++++++...|++++++.|.+++|||||||+|++||++|++.+.+.++ ...+|.++|+|++|+|++  +.+.++
T Consensus         3 ~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~~   80 (162)
T d1tt7a1           3 LFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPRF   80 (162)
T ss_dssp             EEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTTC
T ss_pred             cEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--cccccc
Confidence            58999999999988999999999999999999999999999999999988875 346788999999999998  556789


Q ss_pred             CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCc
Q 020320           80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG  159 (327)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g  159 (327)
                      ++||+|++.....    +...+|+|+||+++|+++++++|+++++++|++++...+|+|.++....+..+++|||+|++|
T Consensus        81 ~~g~~v~~~~~~~----g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~~~~~~~~Vli~ga~G  156 (162)
T d1tt7a1          81 AEGDEVIATSYEL----GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLEETPGALKDILQNRIQG  156 (162)
T ss_dssp             CTTCEEEEESTTB----TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECSTTHHHHHHHTTTTCCSS
T ss_pred             ccceeeEeeeccc----eeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCcc
Confidence            9999999875322    223579999999999999999999999999999999888998776555555667788888766


Q ss_pred             h
Q 020320          160 G  160 (327)
Q Consensus       160 ~  160 (327)
                      .
T Consensus       157 ~  157 (162)
T d1tt7a1         157 R  157 (162)
T ss_dssp             E
T ss_pred             e
Confidence            5

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=7.5e-26  Score=185.29  Aligned_cols=151  Identities=21%  Similarity=0.283  Sum_probs=119.6

Q ss_pred             CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320            1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN   80 (327)
Q Consensus         1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   80 (327)
                      |||++++..++++  |++++++.|+|+++||||||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|+++++++
T Consensus         8 k~KAavl~~~~~~--l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~-~~~P~i~GHE~~G~Vv~vG~~v~~~~   84 (198)
T d2jhfa1           8 KCKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAGIVESIGEGVTTVR   84 (198)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC-CCSSBCCCCSEEEEEEEECTTCCSCC
T ss_pred             EEEEEEEecCCCC--CEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc-cccceecccceeEEEEecCccccCcC
Confidence            6899999888765  99999999999999999999999999999999999765 45899999999999999999999999


Q ss_pred             CCCEEEEecc------------cccccCc--------------------------CCCCCceeeEEEeeccceecCCCCC
Q 020320           81 TGDEVYGNIQ------------DFNAEGK--------------------------LKQLGALAEFIVVEESLIAKKPKNI  122 (327)
Q Consensus        81 ~Gd~V~~~~~------------~~~~~~~--------------------------~~~~g~~~~~~~v~~~~~~~~p~~~  122 (327)
                      +||||+....            ..+.|..                          ....|+|+||+++++.+++++|+.+
T Consensus        85 vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~~  164 (198)
T d2jhfa1          85 PGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAF  164 (198)
T ss_dssp             TTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCCCC
Confidence            9999976432            1111210                          1124899999999999999999999


Q ss_pred             CHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEc
Q 020320          123 SFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVG  156 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~g  156 (327)
                      +++.++....++.+...+.  ..+++|++|.|..
T Consensus       165 ~~e~l~~~~~~~~~v~~g~--~~l~~G~~VaVi~  196 (198)
T d2jhfa1         165 ALDPLITHVLPFEKINEGF--DLLRSGESIRTIL  196 (198)
T ss_dssp             CCGGGEEEEEEGGGHHHHH--HHHHTTCCSEEEE
T ss_pred             CHHHHHHHHHHHHhhhhCC--ceeeCCCEEEEEE
Confidence            8877665544332222221  2346788887764

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=2.5e-27  Score=190.81  Aligned_cols=156  Identities=17%  Similarity=0.174  Sum_probs=129.8

Q ss_pred             CceeEEecccCCC-cceE--EeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC----------CCCCCCcccccccE
Q 020320            1 MQNAWYYEEYGPK-EVLK--LGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF----------PSDFPAVPGCDMAG   67 (327)
Q Consensus         1 ~~~~~v~~~~~~~-~~l~--~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~----------~~~~p~~~G~e~~G   67 (327)
                      |||+++++++|++ +.++  ..++|.|+++++||||||.+++||++|++.++|.++          ...+|.++|+|++|
T Consensus         3 t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g   82 (175)
T d1gu7a1           3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLF   82 (175)
T ss_dssp             EEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEE
T ss_pred             eeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccccc
Confidence            6899999999987 4444  457888899999999999999999999999887652          23577889999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH--hcC
Q 020320           68 IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK--TAG  145 (327)
Q Consensus        68 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~--~~~  145 (327)
                      +|+++|.++..++.||+|.....         ..|+|+||+.+++++++++|++++...++  ++..+|+|+++.  ..+
T Consensus        83 ~V~~~~~~~~~~~~g~~v~~~~~---------~~g~~aey~~v~~~~~~~iP~~~~~~~a~--~~~~~ta~~~l~~~~~~  151 (175)
T d1gu7a1          83 EVIKVGSNVSSLEAGDWVIPSHV---------NFGTWRTHALGNDDDFIKLPNPAQSKANG--KPNGLTDAKSIETLYDG  151 (175)
T ss_dssp             EEEEECTTCCSCCTTCEEEESSS---------CCCCSBSEEEEEGGGEEEECCHHHHHHTT--CSCCCCCCCCEEEECCS
T ss_pred             ccccccccccccccccceecccc---------ccccccceeeehhhhccCCCccchhhhhc--cchHHHHHHHHHHHhcC
Confidence            99999999999999999987542         46889999999999999999987655544  345567888874  367


Q ss_pred             CCCCCEEEEEc-CCchHHHHHHH
Q 020320          146 FKTGQTIFIVG-GAGGVGTLVIQ  167 (327)
Q Consensus       146 ~~~~~~vlI~g-a~g~~G~~a~~  167 (327)
                      +++|++|||.| |+|++|++++|
T Consensus       152 ~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         152 TKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             SSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             CCCCCEEEEECccchhhhheEEe
Confidence            99999999998 45789987765

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=1e-21  Score=156.36  Aligned_cols=150  Identities=25%  Similarity=0.279  Sum_probs=121.4

Q ss_pred             CCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      ++++.||.+.++..|+|+++++.++++|++|+|+| +|++|++++|++|.+ |+++++++.+++|+++++++|+++++++
T Consensus         1 lp~e~AApl~cag~Ta~~al~~~~~~~g~~vlI~G-aG~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~a~~lGa~~~i~~   78 (168)
T d1piwa2           1 IPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVG-LGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGADHYIAT   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEEC-CSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEC-CCCcchhHHHHhhhc-cccccccccchhHHHHhhccCCcEEeec
Confidence            35678888999999999999999999999999999 699999999999998 9999999999999999999999999986


Q ss_pred             CCC-Chhhh-ccCccEEEeCCCCc-----hhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHH
Q 020320          202 RKT-KYEDI-EEKFDVLYDTIGDC-----KNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKL  263 (327)
Q Consensus       202 ~~~-~~~~~-~~~~d~v~d~~g~~-----~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~  263 (327)
                      .++ ++.+. .+++|.++|++++.     ..++.+++++|+++.+|.+.....           .+..+.....++++++
T Consensus        79 ~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~e~  158 (168)
T d1piwa2          79 LEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQL  158 (168)
T ss_dssp             GGTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHH
T ss_pred             cchHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCHHHHHHH
Confidence            543 33333 36899999998742     578899999999999986552221           1122223356788888


Q ss_pred             HhHHHCCCce
Q 020320          264 RPFIESGKLK  273 (327)
Q Consensus       264 ~~l~~~g~~~  273 (327)
                      ++|+++|+++
T Consensus       159 l~li~~gkIk  168 (168)
T d1piwa2         159 LKLVSEKDIK  168 (168)
T ss_dssp             HHHHHHTTCC
T ss_pred             HHHHHhCCCC
Confidence            8888888764

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.87  E-value=2.8e-22  Score=162.07  Aligned_cols=150  Identities=22%  Similarity=0.345  Sum_probs=123.8

Q ss_pred             HhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC
Q 020320          125 EEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK  203 (327)
Q Consensus       125 ~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~  203 (327)
                      ++||++|++++|||+++. .+++++|++|||+||+|++|++++|+|+.+ |++++++++++++.++++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~-g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccc-cccceeeecccccccccccccccccccCCc
Confidence            478899999999999984 678999999999999999999999999999 999999999999999999999999999888


Q ss_pred             CChhhhc------cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCCCCcee-----------eEEeec---------
Q 020320          204 TKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPSHPRAI-----------YSSLTV---------  255 (327)
Q Consensus       204 ~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~~~~~-----------~~~~~~---------  255 (327)
                      .++.+..      +++|++||++|+.  +.++++++++|+++.+|.....+...           +....+         
T Consensus        80 ~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (183)
T d1pqwa_          80 VDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPA  159 (183)
T ss_dssp             STHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHHCHH
T ss_pred             cCHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceeccCHH
Confidence            8876643      5799999999853  77889999999999997543211110           111111         


Q ss_pred             -CHHHHHHHHhHHHCCCceee
Q 020320          256 -SGEILEKLRPFIESGKLKAQ  275 (327)
Q Consensus       256 -~~~~~~~~~~l~~~g~~~~~  275 (327)
                       ..+.++++++++++|++++.
T Consensus       160 ~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         160 RYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHHHHHHHHHHCCCCcee
Confidence             13668889999999999874

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.86  E-value=2.2e-21  Score=154.81  Aligned_cols=150  Identities=23%  Similarity=0.230  Sum_probs=120.3

Q ss_pred             CCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      +++.+||.+++++.|||+++++.+++++++|+|+|++|++|+++++++++++..+++++..+++|++.++++|++++++.
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~   80 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA   80 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeecc
Confidence            57899999999999999999999999999999999889999999999999933577777789999999999999999998


Q ss_pred             CCCChhhhc------cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHH
Q 020320          202 RKTKYEDIE------EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILE  261 (327)
Q Consensus       202 ~~~~~~~~~------~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~  261 (327)
                      ++.++.+..      .++|+++|++|+.   +.++.+++++|+++.+|.+...-.           .+..+.....++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~~d~~  160 (170)
T d1jvba2          81 SMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFL  160 (170)
T ss_dssp             TTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCHHHHH
T ss_pred             CCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCHHHHH
Confidence            887765543      4699999999963   778999999999999986542111           11222233455666


Q ss_pred             HHHhHHHCCC
Q 020320          262 KLRPFIESGK  271 (327)
Q Consensus       262 ~~~~l~~~g~  271 (327)
                      ++++++++|+
T Consensus       161 ~~l~lv~~GK  170 (170)
T d1jvba2         161 GIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHTTS
T ss_pred             HHHHHHHcCC
Confidence            6666666654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.1e-21  Score=157.08  Aligned_cols=121  Identities=19%  Similarity=0.382  Sum_probs=109.2

Q ss_pred             CCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          122 ISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      +++++||++++++.|||+++. ..++++|++|||+|++|++|++++|+||.+ |++++++++++++.+.++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~-G~~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEecccccccccccccccc-CcccccccccccccccccccCcccccc
Confidence            578999999999999999985 689999999999998899999999999999 999999999999999999999999999


Q ss_pred             CCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCC
Q 020320          201 YRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       201 ~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~  243 (327)
                      +++.++.+.+      +++|+++|++|+.  +.++.+++++|+++.+|...
T Consensus        80 ~~~~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~  130 (174)
T d1yb5a2          80 HREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG  130 (174)
T ss_dssp             TTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS
T ss_pred             cccccHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCC
Confidence            9888876643      4799999999853  77889999999999998543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=3.2e-21  Score=153.49  Aligned_cols=121  Identities=27%  Similarity=0.346  Sum_probs=105.6

Q ss_pred             CCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          121 NISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       121 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      +.+++.+|.++++..|+|+++++.++++|++|+|+| +|++|++++|+||.+ |+++|+++.+++++++++++|++++++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~G-aG~vG~~a~qlak~~-Ga~~i~~~~~~~~~~~a~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVG-IGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEec-cchHHHHHHHHhhcc-cccchhhccchhHHHHHhccCCcEEEE
Confidence            456677888888889999999999999999999998 799999999999998 999999999999999999999999998


Q ss_pred             CCCCChhh-hccCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCC
Q 020320          201 YRKTKYED-IEEKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       201 ~~~~~~~~-~~~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~  243 (327)
                      +.+.+... ..+++|.+||++|.   ...++.+++++|+++.+|.+.
T Consensus        81 ~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  127 (168)
T d1uufa2          81 SRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPA  127 (168)
T ss_dssp             TTCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-
T ss_pred             CchhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCC
Confidence            87755443 33689999999984   377899999999999998654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.85  E-value=2.8e-21  Score=154.32  Aligned_cols=120  Identities=23%  Similarity=0.327  Sum_probs=107.0

Q ss_pred             CCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      +|+++|++++.++.|+|++++++++++|++|+|+| +|++|++++|+||.+ |+ ++++++.+++|+++++++|++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~G-aG~vGl~~~q~ak~~-Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIG-IGAVGLMGIAGAKLR-GAGRIIGVGSRPICVEAAKFYGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTT-TCSCEEEECCCHHHHHHHHHHTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEc-CCcchhhhhhhhhcc-cccccccccchhhhHHHHHhhCcccccc
Confidence            47899999999999999999999999999999998 799999999999998 76 6777778999999999999999998


Q ss_pred             CCCCChhhhc------cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          201 YRKTKYEDIE------EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       201 ~~~~~~~~~~------~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ++++++.+..      .++|++||++|+.   +.++.+++++|+++.+|.+.
T Consensus        79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~  130 (174)
T d1jqba2          79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHG  130 (174)
T ss_dssp             GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCC
T ss_pred             ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecC
Confidence            8877766543      4699999999853   77899999999999998754

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.85  E-value=8.6e-21  Score=150.72  Aligned_cols=120  Identities=23%  Similarity=0.344  Sum_probs=105.7

Q ss_pred             CCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      +++++||.+++++.|||++++++++++|++|+|.| +|++|+++++++|.+ |+++++++++++|++.++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~G-aG~vG~~~~~~ak~~-G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISG-IGGLGHVAVQYARAM-GLHVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEee-ccccHHHHHHHHHHc-CCccceecchhhHHHhhhccCccccccc
Confidence            47899999999999999999999999999999998 799999999999999 8999999999999999999999999998


Q ss_pred             CCCChhhhc----cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          202 RKTKYEDIE----EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       202 ~~~~~~~~~----~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      .+.+..+..    .+.+.++++++..   +.++++++++|+++.+|.+.
T Consensus        79 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~  127 (166)
T d1llua2          79 RQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPP  127 (166)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCS
T ss_pred             cchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecC
Confidence            887766543    4667777776643   77889999999999998654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.84  E-value=5.9e-21  Score=151.98  Aligned_cols=121  Identities=17%  Similarity=0.284  Sum_probs=103.5

Q ss_pred             CCHHhhcccchHHHHHHHHHH----hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCE
Q 020320          122 ISFEEAASLPLAVQTAIEGFK----TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK  197 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~----~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~  197 (327)
                      +++++||++|.+++|||++++    ....++|++|||+||+|++|.+++|+||.+ |++++++++++++.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~-Ga~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHc-CCceEEecCchHHHHHHHhcccce
Confidence            589999999999999997764    477889999999999999999999999999 999999999999999999999999


Q ss_pred             EEeCCCCChhhh----ccCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCC
Q 020320          198 VIDYRKTKYEDI----EEKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       198 v~~~~~~~~~~~----~~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ++++++......    .+++|++||++|..  ...+.+|+++|+++.+|...
T Consensus        80 vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~  131 (176)
T d1xa0a2          80 VLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTG  131 (176)
T ss_dssp             EEECC---------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCS
T ss_pred             eeecchhHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeeccc
Confidence            998765432221    25899999999843  88999999999999998653

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=3.7e-21  Score=154.79  Aligned_cols=121  Identities=28%  Similarity=0.353  Sum_probs=109.7

Q ss_pred             CCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          122 ISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      +++++||+++++++|||+++. ..++++|++|+|+||+|++|++++|+||.. |++++++++++++.++++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~-Ga~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHh-CCeEeecccchHHHHHHHhcCCeEEEE
Confidence            578999999999999999996 578999999999999999999999999998 999999999999999999999999999


Q ss_pred             CCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCC
Q 020320          201 YRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       201 ~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~  243 (327)
                      +++.++.+.+      .++|+++|++|..  ..++.+++++|+++.++...
T Consensus        80 ~~~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  130 (179)
T d1qora2          80 YREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS  130 (179)
T ss_dssp             TTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTT
T ss_pred             CCCCCHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeeccccc
Confidence            9888887654      4799999999843  77889999999999987544

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=2.1e-21  Score=154.79  Aligned_cols=121  Identities=24%  Similarity=0.364  Sum_probs=104.7

Q ss_pred             CCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      +++++||.+++++.|||++++++++++|++|+|+|++|++|++++|+||++ |++++++++++++.+.++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~-G~~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhhhhccc-ccccccccccccccccccccccceeeeh
Confidence            578999999999999999999899999999999999999999999999999 9999999999999999999999999987


Q ss_pred             CCCC-hhhhccCccEEEeCCCCc-hhhhhhhcCCCcEEEeeCCC
Q 020320          202 RKTK-YEDIEEKFDVLYDTIGDC-KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       202 ~~~~-~~~~~~~~d~v~d~~g~~-~~~~~~l~~~g~~v~~g~~~  243 (327)
                      .+.. .....+++|++||++|.. ..++.+++++|+++.+|...
T Consensus        80 ~~~~~~~~~~~g~D~v~d~~G~~~~~~~~~l~~~G~~v~~G~~~  123 (171)
T d1iz0a2          80 AEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIGAAE  123 (171)
T ss_dssp             GGHHHHHHHTTSEEEEEECSCTTHHHHHTTEEEEEEEEEC----
T ss_pred             hhhhhhhhccccccccccccchhHHHHHHHHhcCCcEEEEeCCC
Confidence            5422 122346899999999844 78899999999999998643

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.84  E-value=1.8e-20  Score=149.12  Aligned_cols=120  Identities=30%  Similarity=0.406  Sum_probs=105.0

Q ss_pred             CCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      +++++||.++++++|||+++++.++++|++|+|+| +|++|++++++++.. |+++++++.+++|+++++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G-~G~iG~~a~~~a~~~-g~~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYG-IGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEee-cccchhhhhHHHhcC-CCeEeccCCCHHHhhhhhhcCcceeccc
Confidence            57899999999999999999999999999999998 799999999999998 9999999999999999999999999998


Q ss_pred             CCCChhhhc----cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCC
Q 020320          202 RKTKYEDIE----EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       202 ~~~~~~~~~----~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~  243 (327)
                      .+.++...+    .+.+.++++.++   .+.++.+++++|+++.+|.+.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~  127 (168)
T d1rjwa2          79 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPP  127 (168)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCS
T ss_pred             ccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEeccccc
Confidence            887766543    455666666553   378899999999999998654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7.3e-20  Score=145.93  Aligned_cols=119  Identities=25%  Similarity=0.430  Sum_probs=102.5

Q ss_pred             CCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      +++++||++ .++.+|||+++++++++|++|+|+| +|++|++++++++++ |+ ++++++.+++|+++++++|++++++
T Consensus         1 vS~e~Aal~-epla~a~~a~~~~~~~~gd~VlI~G-~G~iG~~~~~~a~~~-G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGALI-EPLSVGIHACRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGADLVLQ   77 (171)
T ss_dssp             SCHHHHHHH-HHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHH-HHHHHHHHHHHHhCCCCCCEEEEEC-CCccHHHHHHHHHHc-CCceEEeccCCHHHHHHHHHhCCccccc
Confidence            468888866 3455699999999999999999998 799999999999999 77 6778889999999999999999998


Q ss_pred             CCCCChhhhc--------cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          201 YRKTKYEDIE--------EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       201 ~~~~~~~~~~--------~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ..+.+.....        .++|++||++|..   +.++.+++++|+++.+|.+.
T Consensus        78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~  131 (171)
T d1pl8a2          78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS  131 (171)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC
T ss_pred             ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCC
Confidence            8777654422        4799999999964   78899999999999998755

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.82  E-value=9.5e-20  Score=145.59  Aligned_cols=120  Identities=21%  Similarity=0.251  Sum_probs=103.5

Q ss_pred             CCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEE-EeCCcccHHHHHHcCCCEEE
Q 020320          122 ISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVV-ATTSTPKVEFVKELGADKVI  199 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~-~~~~~~~~~~~~~~g~~~v~  199 (327)
                      ++++.|+.+++++.|||+++ +.+++++|++|+|+| +|++|++++|+||.+ |+++++ ++.+++|+++++++|+++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G-~G~iG~~~~~~ak~~-g~~~v~~~~~~~~k~~~a~~~Ga~~~i   78 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQLGATHVI   78 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHHTCSEEE
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeC-CCHHHhhhhhccccc-ccceeeeeccHHHHHHHHHHcCCeEEE
Confidence            35678899999999999997 568999999999999 699999999999999 776654 55788999999999999999


Q ss_pred             eCCCCChhhhc-----cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          200 DYRKTKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       200 ~~~~~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ++++.++.+.+     .++|++|||+|+.   +.++.+++++|+++.+|.+.
T Consensus        79 ~~~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~  130 (174)
T d1f8fa2          79 NSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQ  130 (174)
T ss_dssp             ETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCS
T ss_pred             eCCCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecC
Confidence            98887776643     4799999999964   67789999999999998644

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.82  E-value=1.1e-19  Score=144.91  Aligned_cols=120  Identities=25%  Similarity=0.350  Sum_probs=100.6

Q ss_pred             CHHhhcccchHHHHHHHHHHhc--CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGFKTA--GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      .+.++|.++++++|||+++.+.  .+++|++|+|.| +|++|++++++++++++.++++++.+++|+++++++|++++++
T Consensus         5 ~l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~   83 (172)
T d1h2ba2           5 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVD   83 (172)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             hHHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeec
Confidence            3567888999999999999753  589999999999 7999999999999993345566668899999999999999999


Q ss_pred             CCCCChhhhc-----cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          201 YRKTKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       201 ~~~~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ++++......     .++|++||++|..   +.++.+++++|+++.+|...
T Consensus        84 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~  134 (172)
T d1h2ba2          84 ARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG  134 (172)
T ss_dssp             TTSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS
T ss_pred             CcccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc
Confidence            8776554432     4799999999953   78899999999999998643

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.82  E-value=2e-19  Score=143.34  Aligned_cols=119  Identities=21%  Similarity=0.208  Sum_probs=100.7

Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      +++.||++++++.|+|+++ +.+++++|++|+|+| +|++|++++|++|.+ |++ +++++.+++|++.++++|++++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G-~G~iGl~a~~~ak~~-Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~   79 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKALGATDCLN   79 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCSEEEC
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CChHHHHHHHHHHHh-CCceeeeeccchHHHHHHHHhCCCcccC
Confidence            4688999999999999998 579999999999998 899999999999999 775 556668999999999999999997


Q ss_pred             CCCCC--hhhh-----ccCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCC
Q 020320          201 YRKTK--YEDI-----EEKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPP  243 (327)
Q Consensus       201 ~~~~~--~~~~-----~~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~  243 (327)
                      ....+  ....     ..++|++|||+|..   +.++.+++++ |+++.+|.+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~  133 (174)
T d1e3ia2          80 PRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV  133 (174)
T ss_dssp             GGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS
T ss_pred             CccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCC
Confidence            65432  2221     25899999999964   7888999996 9999998754

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.81  E-value=1.7e-19  Score=145.33  Aligned_cols=119  Identities=22%  Similarity=0.297  Sum_probs=102.4

Q ss_pred             CHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      +++.+|.+.++..|||+++. ..++++|++|+|+| +|++|++++|+|+++ |+ ++++++++++|+++++++|++++++
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~G-aG~iG~~~~~~ak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~   79 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGADLTLN   79 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEEC-CCccchhheeccccc-ccccccccccccccccccccccceEEEe
Confidence            35667788899999999995 57899999999999 699999999999998 87 6788889999999999999999999


Q ss_pred             CCCCChhhh---------ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          201 YRKTKYEDI---------EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       201 ~~~~~~~~~---------~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ..+.+..+.         ..++|++||++|..   ..++.+++++|+++.+|...
T Consensus        80 ~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~  134 (182)
T d1vj0a2          80 RRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAV  134 (182)
T ss_dssp             TTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCS
T ss_pred             ccccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecC
Confidence            888765432         13799999999853   67899999999999998643

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.81  E-value=2.5e-19  Score=142.92  Aligned_cols=118  Identities=21%  Similarity=0.185  Sum_probs=97.3

Q ss_pred             HHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          124 FEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       124 ~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      +.+||++.+++.|+|+++ +.+++++|++|+|+| +|++|++++|++|++ |+ ++++++.+++|+++++++|+++++|+
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~G-aGgvGl~a~~~ak~~-G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~   79 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIELGATECLNP   79 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHc-CCceeeccCChHHHHHHHHHcCCcEEEcC
Confidence            456899999999999997 579999999999999 799999999999999 75 56666689999999999999999987


Q ss_pred             CCCC--hhhhc-----cCccEEEeCCCCc---hhhhhhhcC-CCcEEEeeCCC
Q 020320          202 RKTK--YEDIE-----EKFDVLYDTIGDC---KNSFVVAKD-NAPIVDITWPP  243 (327)
Q Consensus       202 ~~~~--~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~-~g~~v~~g~~~  243 (327)
                      ++.+  .....     +++|++||++|..   ...+..+++ +|+++.+|.+.
T Consensus        80 ~~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~  132 (174)
T d1p0fa2          80 KDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLAS  132 (174)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCC
T ss_pred             CCchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEec
Confidence            6544  22221     5899999999965   456666655 58999998755

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.81  E-value=4.8e-19  Score=141.01  Aligned_cols=119  Identities=23%  Similarity=0.358  Sum_probs=99.6

Q ss_pred             CCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      +++++|+++ .++.+||+++++.++++|++|+|+| +|++|++++|++|.+ |+++++++++++|+++++++|++..+..
T Consensus         1 VS~e~Aal~-ePla~a~~a~~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~-Ga~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALL-EPLSVGVHACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTH-HHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHH-HHHHHHHHHHHHhCCCCCCEEEEEc-ccccchhhHhhHhhh-cccccccchHHHHHHHHHHcCCcEEEec
Confidence            478888876 2345699999999999999999998 899999999999998 8999999999999999999999987654


Q ss_pred             CC--CChhh---h-----ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          202 RK--TKYED---I-----EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       202 ~~--~~~~~---~-----~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      +.  .+...   .     ..++|++||++|+.   +.++++++++|+++.+|.+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~  132 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS  132 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCC
Confidence            33  22221   1     14799999999964   77889999999999998654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.80  E-value=1.7e-19  Score=145.30  Aligned_cols=113  Identities=27%  Similarity=0.412  Sum_probs=100.9

Q ss_pred             cccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh
Q 020320          128 ASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY  206 (327)
Q Consensus       128 a~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (327)
                      ++++++++|||+++. ..++++|++|||+||+|++|++++|+||.+ |+++|++++++++.++++++|+++++++++.++
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~   86 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNS   86 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSC
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHcc-CCEEEEeCCCHHHHHHHHhhhhhhhcccccccH
Confidence            356788999999995 689999999999999999999999999998 999999999999999999999999999887766


Q ss_pred             hhhc------cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeC
Q 020320          207 EDIE------EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       207 ~~~~------~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~  241 (327)
                      .+..      +++|++||++|..  ...+.+++++|+++.+|.
T Consensus        87 ~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~  129 (182)
T d1v3va2          87 LEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGA  129 (182)
T ss_dssp             HHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCC
T ss_pred             HHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecc
Confidence            5432      5799999999843  788999999999999984

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.80  E-value=1.1e-18  Score=139.77  Aligned_cols=118  Identities=21%  Similarity=0.289  Sum_probs=97.0

Q ss_pred             CHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEe
Q 020320          123 SFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVID  200 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~  200 (327)
                      |+++||++++++.|+|+++. .+++++|++|+|+| +|++|++++|+++++ |++ +++++++++|+++++++|++++++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~G-aGGvG~~aiq~ak~~-G~~~vi~~~~~~~k~~~ak~lGa~~~i~   79 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATECIN   79 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEec-chhHHHHHHHHHHHH-hcCceEEEcccHHHHHHHHHhCCcEEEe
Confidence            57889999999999999984 68999999999999 689999999999999 754 555557888999999999999997


Q ss_pred             CCC--CChhhhc-----cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCC
Q 020320          201 YRK--TKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       201 ~~~--~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~  242 (327)
                      +.+  +......     .++|++||++|..   ..+..+++++|.++.++..
T Consensus        80 ~~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~  131 (176)
T d2fzwa2          80 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGV  131 (176)
T ss_dssp             GGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred             CCchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEee
Confidence            754  2332222     5899999999964   5677888888888776543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.79  E-value=1.4e-19  Score=146.54  Aligned_cols=121  Identities=19%  Similarity=0.288  Sum_probs=100.1

Q ss_pred             CCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEE-cCCchHHHHHHHHHHhhcCCcEEEEeCCccc----HHHHHHcCC
Q 020320          122 ISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIV-GGAGGVGTLVIQLAKHFYGASHVVATTSTPK----VEFVKELGA  195 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~-ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~----~~~~~~~g~  195 (327)
                      +++++||+++++++|||+++. ..++++|++++|+ ||+|++|++++|+||.+ |+++|++++++++    .+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~-Ga~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhc-CCeEEEEEecccccchHHhhhhhccc
Confidence            578999999999999999996 5899999998887 77899999999999999 9999999866543    456789999


Q ss_pred             CEEEeCCCCC---hhhh--------ccCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCC
Q 020320          196 DKVIDYRKTK---YEDI--------EEKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       196 ~~v~~~~~~~---~~~~--------~~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~  243 (327)
                      +++++++..+   +...        .+++|++||++|..  ...+.+|+++|+++.+|...
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~  140 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMS  140 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCS
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCcc
Confidence            9999764322   2111        14699999999843  77889999999999998654

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.77  E-value=3.2e-18  Score=136.80  Aligned_cols=119  Identities=16%  Similarity=0.169  Sum_probs=96.6

Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      |+++||++++++.|+|+++ +.+++++|++|+|+| +|++|++++++++..++.++++++++++|++.++++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEe-cCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcC
Confidence            5789999999999999998 578999999999999 79999999999999845567777789999999999999999987


Q ss_pred             CCCCh-hhh------ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCC
Q 020320          202 RKTKY-EDI------EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       202 ~~~~~-~~~------~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~  242 (327)
                      .+.+. ...      .+++|+++|++|..   +.++.+++++|.++.++..
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~  131 (175)
T d1cdoa2          81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW  131 (175)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred             CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEe
Confidence            65432 221      15899999999964   5667777777666554433

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.77  E-value=6.6e-18  Score=135.06  Aligned_cols=118  Identities=21%  Similarity=0.248  Sum_probs=96.2

Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      |+++||++++++.|+|+++ +.+++++|++|+|+| +|++|++++++++.+++.++++++.+++|+++++++|+++++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~G-aGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEEC-CCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEec
Confidence            5788999999999999998 578999999999999 68999999999999944677777789999999999999999876


Q ss_pred             CC-CChhh-h-----ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeC
Q 020320          202 RK-TKYED-I-----EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       202 ~~-~~~~~-~-----~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~  241 (327)
                      .+ ++... .     ..++|++||++|..   ..++..++++|..+.++.
T Consensus        81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~  130 (176)
T d2jhfa2          81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVG  130 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECS
T ss_pred             CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEec
Confidence            44 22222 1     15899999999964   567788888765555544

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.76  E-value=9.3e-18  Score=133.86  Aligned_cols=121  Identities=21%  Similarity=0.254  Sum_probs=100.2

Q ss_pred             CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      +++.||++++++.|+|+++ +.+++++|++|+|+| +|++|++++++++.++..++|+++.+++|+++++++|+++++++
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~   81 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECc
Confidence            5899999999999999998 568999999999999 89999999999999933567788899999999999999999987


Q ss_pred             CCCCh-hhh------ccCccEEEeCCCCc---hhhhhhhc-CCCcEEEeeCCCC
Q 020320          202 RKTKY-EDI------EEKFDVLYDTIGDC---KNSFVVAK-DNAPIVDITWPPS  244 (327)
Q Consensus       202 ~~~~~-~~~------~~~~d~v~d~~g~~---~~~~~~l~-~~g~~v~~g~~~~  244 (327)
                      ++.+. .+.      ..++|+++|++|..   ..++..+. .+|+++.+|.+..
T Consensus        82 ~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~  135 (176)
T d1d1ta2          82 KDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPS  135 (176)
T ss_dssp             GGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCT
T ss_pred             cccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcccc
Confidence            66443 221      15899999999965   44555554 4599999987653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.75  E-value=5.9e-18  Score=137.19  Aligned_cols=118  Identities=20%  Similarity=0.200  Sum_probs=101.6

Q ss_pred             HhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCC
Q 020320          125 EEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKT  204 (327)
Q Consensus       125 ~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~  204 (327)
                      ++.++++..+.|||++++++++++|++|+|+| +|++|++++++++.+++.++++++.+++|++.++++|+++++++.+.
T Consensus         2 ~d~~~l~d~~~ta~~a~~~a~v~~G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~   80 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAVTAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDT   80 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSS
T ss_pred             chHHhcccHHHHHHHHHHHhCCCCCCEEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCc
Confidence            46677888999999999999999999999998 79999999999999834467777789999999999999999988877


Q ss_pred             Chhhhc------cCccEEEeCCCC------------------chhhhhhhcCCCcEEEeeCCC
Q 020320          205 KYEDIE------EKFDVLYDTIGD------------------CKNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       205 ~~~~~~------~~~d~v~d~~g~------------------~~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ++.+..      .++|++||++|.                  .+.++.+++++|+++.+|.+.
T Consensus        81 ~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~  143 (195)
T d1kola2          81 PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYV  143 (195)
T ss_dssp             CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCC
T ss_pred             CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecC
Confidence            776543      479999999982                  256788999999999998754

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=2.3e-18  Score=139.03  Aligned_cols=118  Identities=25%  Similarity=0.395  Sum_probs=95.1

Q ss_pred             CHHhhcccchHHHHHHHHHH-hcCCCCC--CEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCccc-HHHHHHcCCCE
Q 020320          123 SFEEAASLPLAVQTAIEGFK-TAGFKTG--QTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPK-VEFVKELGADK  197 (327)
Q Consensus       123 ~~~~aa~~~~~~~ta~~~l~-~~~~~~~--~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~-~~~~~~~g~~~  197 (327)
                      ++...+ ++++.+|||+++. ..++++|  ++|||+||+|++|++++|+||.+ |++++++ +.++++ ..+++++|+++
T Consensus         3 ~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~-Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           3 SYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLL-GCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHT-TCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             cHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHc-CCcceecccchHHHHhhhhhcccceE
Confidence            344443 6778999999995 6788887  88999999999999999999999 8876654 556554 45557899999


Q ss_pred             EEeCCCCChhhhc-----cCccEEEeCCCC--chhhhhhhcCCCcEEEeeCC
Q 020320          198 VIDYRKTKYEDIE-----EKFDVLYDTIGD--CKNSFVVAKDNAPIVDITWP  242 (327)
Q Consensus       198 v~~~~~~~~~~~~-----~~~d~v~d~~g~--~~~~~~~l~~~g~~v~~g~~  242 (327)
                      ++|+.++++.+.+     +++|++||++|.  .+..+.+++++|+++.+|..
T Consensus        81 vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~  132 (187)
T d1vj1a2          81 AVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQI  132 (187)
T ss_dssp             EEETTSSCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC---
T ss_pred             EeeccchhHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccc
Confidence            9999998887754     479999999985  37889999999999999853

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=3.1e-18  Score=136.40  Aligned_cols=121  Identities=21%  Similarity=0.261  Sum_probs=104.3

Q ss_pred             CCHHhhcccchHHHHHHHHH---HhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCE
Q 020320          122 ISFEEAASLPLAVQTAIEGF---KTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK  197 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l---~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~  197 (327)
                      +++.+|+.++++.+|||+++   ...+ ...+++|||+||+|++|++++|+||.+ |+++|++++++++.+.++++|+|+
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~-Ga~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHc-CCCeEEEecchhHHHHHHhhcccc
Confidence            57899999999999999876   3344 445569999999999999999999999 999999999999999999999999


Q ss_pred             EEeCCCCChhhhc--cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCC
Q 020320          198 VIDYRKTKYEDIE--EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       198 v~~~~~~~~~~~~--~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~  243 (327)
                      ++++++.++...+  ...|.++|++|..  ...+.+++++|+++.+|...
T Consensus        80 vi~~~~~~~~~~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~  129 (177)
T d1o89a2          80 VLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAG  129 (177)
T ss_dssp             EEEGGGSSSCCSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTT
T ss_pred             ccccccHHHHHHHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccC
Confidence            9998776665544  3579999999854  78899999999999998654

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.68  E-value=3.9e-16  Score=119.70  Aligned_cols=133  Identities=15%  Similarity=0.187  Sum_probs=100.0

Q ss_pred             ceeEEeccc--CCC--cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCC
Q 020320            2 QNAWYYEEY--GPK--EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVT   77 (327)
Q Consensus         2 ~~~~v~~~~--~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   77 (327)
                      .|+|++.++  |.+  +.|++++.++|.+++||||||++|.+++|..+...... .   ..-.+..+.+|+|++  |+++
T Consensus         4 ~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~~-~---~g~~~~g~~vg~Vv~--S~~~   77 (147)
T d1v3va1           4 AKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKRL-K---EGAVMMGQQVARVVE--SKNS   77 (147)
T ss_dssp             EEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGGS-C---TTSBCCCCEEEEEEE--ESCT
T ss_pred             cEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEccccccccccc-c---cCCccccceEEEEEE--eCCC
Confidence            478998887  544  56999999999999999999999999999887655322 1   112345578888886  7788


Q ss_pred             CCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHH-----hhcccchHHHH-HHHHHHhcCCCCCCE
Q 020320           78 KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFE-----EAASLPLAVQT-AIEGFKTAGFKTGQT  151 (327)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~-----~aa~~~~~~~t-a~~~l~~~~~~~~~~  151 (327)
                      +|++||+|++.             ++|+||.+.++..+.++|++.+..     ..+++....+| ||.++ ....+.|++
T Consensus        78 ~f~~GD~V~g~-------------~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl-~~~~k~Get  143 (147)
T d1v3va1          78 AFPAGSIVLAQ-------------SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEM-LNGANLGKA  143 (147)
T ss_dssp             TSCTTCEEEEC-------------CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHH-HTTCCSSEE
T ss_pred             cccCCCEEEEc-------------cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHh-hCCCCCCCE
Confidence            99999999974             679999999999999998765433     23344444445 55465 344577999


Q ss_pred             EEE
Q 020320          152 IFI  154 (327)
Q Consensus       152 vlI  154 (327)
                      |++
T Consensus       144 vv~  146 (147)
T d1v3va1         144 VVT  146 (147)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            986

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.65  E-value=1.2e-16  Score=125.75  Aligned_cols=111  Identities=17%  Similarity=0.255  Sum_probs=90.6

Q ss_pred             HHHHHH---HHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320          133 AVQTAI---EGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED  208 (327)
Q Consensus       133 ~~~ta~---~~l~~-~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (327)
                      +..|||   +++.. ....++++|||+||+|++|++++|+||.+ |+++|.+++++++.++++++|+++++++++.....
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~   82 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEVISREDVYDGT   82 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSC
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHc-CCceEEEecCHHHHHHHHhhcccceEeccchhchh
Confidence            345565   44543 55667889999999999999999999999 99999999999999999999999999764322111


Q ss_pred             ----hccCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCC
Q 020320          209 ----IEEKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPS  244 (327)
Q Consensus       209 ----~~~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~  244 (327)
                          ..+++|+++|++|..  ...+.+++++|+++.+|....
T Consensus        83 ~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g  124 (167)
T d1tt7a2          83 LKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG  124 (167)
T ss_dssp             CCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC
T ss_pred             hhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCC
Confidence                125799999999854  789999999999999987653

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=5.3e-14  Score=94.41  Aligned_cols=73  Identities=25%  Similarity=0.333  Sum_probs=66.9

Q ss_pred             CCHHhhcccchHHHHHHHHHH----hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC
Q 020320          122 ISFEEAASLPLAVQTAIEGFK----TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA  195 (327)
Q Consensus       122 ~~~~~aa~~~~~~~ta~~~l~----~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~  195 (327)
                      +++++|+.++.+..|||.++.    ....+++++|+|+|++|++|.+++|++|.+ |++++++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~-G~~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHHCCC
Confidence            578999999999999998763    366789999999999999999999999999 9999999999999999999985

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.80  E-value=3.1e-05  Score=58.65  Aligned_cols=92  Identities=18%  Similarity=0.278  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC--CEEEeCCCCChhhhccCccEEEeCC---CC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA--DKVIDYRKTKYEDIEEKFDVLYDTI---GD  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~d~v~d~~---g~  222 (327)
                      +.-+|+|+| +|..|+.++..|+.+ |+.+.+.+.+.++++.+++...  ...+..+.....+.+..+|+++.++   |.
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~l-GA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~  108 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR  108 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhC-CCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCc
Confidence            457899999 899999999999999 9999999999999988876542  2223333344555667899999886   32


Q ss_pred             --c----hhhhhhhcCCCcEEEeeC
Q 020320          223 --C----KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       223 --~----~~~~~~l~~~g~~v~~g~  241 (327)
                        +    ...++.|+++..++++..
T Consensus       109 ~aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         109 RAPILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             SCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             ccCeeecHHHHhhcCCCcEEEEeec
Confidence              1    678899999999999853

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.76  E-value=7.1e-05  Score=57.46  Aligned_cols=91  Identities=21%  Similarity=0.241  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEe--CCCCC--------------------
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID--YRKTK--------------------  205 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~--~~~~~--------------------  205 (327)
                      +.-+|+|+| +|..|+.|+..|+.+ |+.+.+.+.++++++.+++++...+-.  .....                    
T Consensus        28 ~pa~VvViG-aGvaG~~Aa~~A~~l-GA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          28 PPARVLVFG-VGVAGLQAIATAKRL-GAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHHc-CCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            356899999 899999999999999 999999999999999999998655411  00000                    


Q ss_pred             --hhhhccCccEEEeCC---CC--c----hhhhhhhcCCCcEEEee
Q 020320          206 --YEDIEEKFDVLYDTI---GD--C----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       206 --~~~~~~~~d~v~d~~---g~--~----~~~~~~l~~~g~~v~~g  240 (327)
                        +.+.+..+|+++-++   |.  +    ...++.|++|..++++.
T Consensus       106 ~~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDva  151 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA  151 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred             HHHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEe
Confidence              111235799999875   32  1    67889999999999984

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.52  E-value=0.00011  Score=57.61  Aligned_cols=75  Identities=13%  Similarity=0.153  Sum_probs=55.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-Hc----CC-CEEEeCCC-CChhhhccCccEEEe
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-EL----GA-DKVIDYRK-TKYEDIEEKFDVLYD  218 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~----g~-~~v~~~~~-~~~~~~~~~~d~v~d  218 (327)
                      --.|++++|+||+|++|.+++..+... |++++++.+++++.+.+. ++    .. ....+..+ ....+...++|++|+
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin   98 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT   98 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhh-ccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence            457899999999999999998888888 999999999988765553 22    22 22233322 333445678999999


Q ss_pred             CCC
Q 020320          219 TIG  221 (327)
Q Consensus       219 ~~g  221 (327)
                      +.|
T Consensus        99 ~Ag  101 (191)
T d1luaa1          99 AGA  101 (191)
T ss_dssp             CCC
T ss_pred             cCc
Confidence            987

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.29  E-value=0.00039  Score=56.66  Aligned_cols=73  Identities=19%  Similarity=0.280  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh----------hccCccEE
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED----------IEEKFDVL  216 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----------~~~~~d~v  216 (327)
                      -.|+++||+||++++|.+.++.+... |+++++..+++++.+.+++.+...+- -+-.+..+          ...++|++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~-~Dv~~~~~v~~~~~~~~~~~G~iDiL   80 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEGKEVAEAIGGAFFQ-VDLEDERERVRFVEEAAYALGRVDVL   80 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTHHHHHHHHTCEEEE-CCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCeEEE-EeCCCHHHHHHHHHHHHHhcCCCCeE
Confidence            46899999999999999988888777 99999999998888888888765432 11122211          12579999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++|
T Consensus        81 VnnAG   85 (248)
T d2d1ya1          81 VNNAA   85 (248)
T ss_dssp             EECCC
T ss_pred             EEeCc
Confidence            99987

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00093  Score=54.19  Aligned_cols=73  Identities=16%  Similarity=0.288  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhh------hccCccEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYED------IEEKFDVLYDTI  220 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~------~~~~~d~v~d~~  220 (327)
                      .|+++||+||++++|.+.++.+... |+++++..+++++++.+ ++++....+.-+-.+...      ...++|++++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA   84 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence            6899999999999999998888877 99999999988876554 455533322222122111      235799999998


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        85 g   85 (244)
T d1pr9a_          85 A   85 (244)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.17  E-value=0.0013  Score=53.95  Aligned_cols=119  Identities=13%  Similarity=0.150  Sum_probs=77.8

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cCC-CEEEeCCCCChhhh-
Q 020320          137 AIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LGA-DKVIDYRKTKYEDI-  209 (327)
Q Consensus       137 a~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~-  209 (327)
                      +.+.+...+++||++||=.| ||. |..+..+|+..+ +.+++.++.+++..+.+++    +|. +.+.. ...+.... 
T Consensus        92 ~~~Ii~~l~i~pG~~VLDiG-~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~-~~~d~~~~~  168 (266)
T d1o54a_          92 SSFIAMMLDVKEGDRIIDTG-VGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTI-KVRDISEGF  168 (266)
T ss_dssp             HHHHHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEE-ECCCGGGCC
T ss_pred             HHHHHHhhCCCCCCEEEECC-CCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEE-Eeccccccc
Confidence            44456789999999999998 565 667778888762 3578888889888777743    553 22221 11222221 


Q ss_pred             -ccCccEEEeCCCCc----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCc
Q 020320          210 -EEKFDVLYDTIGDC----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKL  272 (327)
Q Consensus       210 -~~~~d~v~d~~g~~----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~  272 (327)
                       ...+|.++--...+    ..+.++|+|||+++.+.              .+-+.++++++.+++..+
T Consensus       169 ~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~--------------P~~~Qv~~~~~~l~~~gF  222 (266)
T d1o54a_         169 DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC--------------PTTNQVQETLKKLQELPF  222 (266)
T ss_dssp             SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE--------------SSHHHHHHHHHHHHHSSE
T ss_pred             cccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe--------------CcccHHHHHHHHHHHCCc
Confidence             23578877555433    67789999999998753              223556667777766544

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.10  E-value=0.0015  Score=52.85  Aligned_cols=73  Identities=22%  Similarity=0.332  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEE-eCCCCC-hhh-------hccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVI-DYRKTK-YED-------IEEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~-~~~~~~-~~~-------~~~~~d~v~  217 (327)
                      .|+++||+||++++|.++++.+... |+++++..+++++.+.+ +++++..+. |-.+.+ ...       ...++|+++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   82 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            5799999999999999998888887 99999999988877655 456654432 222211 111       124799999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      +++|
T Consensus        83 nnAG   86 (242)
T d1ulsa_          83 HYAG   86 (242)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9987

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.10  E-value=0.0015  Score=52.85  Aligned_cols=73  Identities=16%  Similarity=0.224  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhh------hccCccEEEeCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYED------IEEKFDVLYDTI  220 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~------~~~~~d~v~d~~  220 (327)
                      .|+++||+||++++|.++++.+... |+++++..+++++.+.+ ++++.-..+.-+-.+...      ...++|++++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnA   82 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA   82 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECC
Confidence            5899999999999999988888777 99999999988776544 455433222221122111      225799999998


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        83 g   83 (242)
T d1cyda_          83 A   83 (242)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.08  E-value=0.0012  Score=52.40  Aligned_cols=99  Identities=19%  Similarity=0.214  Sum_probs=66.3

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cCCCEEEeCCCC--Chhhhcc
Q 020320          139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LGADKVIDYRKT--KYEDIEE  211 (327)
Q Consensus       139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~--~~~~~~~  211 (327)
                      ..++..++++|++||-+| ||. |..++.+++..+ ..+++.+..+++..+.+++    .+.+.+.....+  .......
T Consensus        66 ~~l~~l~l~~g~~VLdiG-~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~  143 (213)
T d1dl5a1          66 LFMEWVGLDKGMRVLEIG-GGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFS  143 (213)
T ss_dssp             HHHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred             HHHHhhhccccceEEEec-Ccc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcccccc
Confidence            356788999999999999 665 778888888872 2357777788887766643    454443321111  1111224


Q ss_pred             CccEEEeCCC--C-chhhhhhhcCCCcEEEe
Q 020320          212 KFDVLYDTIG--D-CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       212 ~~d~v~d~~g--~-~~~~~~~l~~~g~~v~~  239 (327)
                      .+|+++...+  . +...++.|+|||+++..
T Consensus       144 ~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         144 PYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             CEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             chhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            5899997654  2 36678899999999774

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.0015  Score=53.06  Aligned_cols=73  Identities=19%  Similarity=0.334  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhh----------hccCccEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVIDYRKTKYED----------IEEKFDVL  216 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~----------~~~~~d~v  216 (327)
                      .|+++||+||++++|.+.++.+... |+++++..+++++.+.+.+ ++....+.-+-.+..+          ...++|++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899999999999999988888777 9999999999888776654 4432222222122211          12479999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++|
T Consensus        84 VnnAG   88 (250)
T d1ydea1          84 VNNAG   88 (250)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99987

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.0048  Score=46.11  Aligned_cols=99  Identities=21%  Similarity=0.282  Sum_probs=75.3

Q ss_pred             HHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320          137 AIEGFKT--AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       137 a~~~l~~--~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d  214 (327)
                      .+.++.+  .-.-.|++++|.| .|-+|..+++.++.+ |++++++...+-+.-.+..-|.. +.     .+.+.....|
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~-G~~V~v~e~dp~~al~A~~dG~~-v~-----~~~~a~~~ad   81 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGF-GARVIITEIDPINALQAAMEGYE-VT-----TMDEACQEGN   81 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHHTTTCS
T ss_pred             HHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhC-CCeeEeeecccchhHHhhcCceE-ee-----ehhhhhhhcc
Confidence            4445532  4467899999999 999999999999998 99999999887665555544543 21     2445566789


Q ss_pred             EEEeCCCCc----hhhhhhhcCCCcEEEeeCCC
Q 020320          215 VLYDTIGDC----KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       215 ~v~d~~g~~----~~~~~~l~~~g~~v~~g~~~  243 (327)
                      +++-+.|..    ...+..|+++..+...|...
T Consensus        82 ivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd  114 (163)
T d1li4a1          82 IFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFD  114 (163)
T ss_dssp             EEEECSSCSCSBCHHHHTTCCTTEEEEECSSST
T ss_pred             EEEecCCCccchhHHHHHhccCCeEEEEecccc
Confidence            999999853    67788999999988887544

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.95  E-value=0.0021  Score=51.69  Aligned_cols=70  Identities=16%  Similarity=0.267  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh---hhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY---EDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~~~d~v~d~~g  221 (327)
                      +|+++||+||++++|.++++.+... |+++++..+++++   +++.+...+...-....   .+...++|++++++|
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~-Ga~V~~~~r~~~~---l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG   75 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQE-GAEVTICARNEEL---LKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAG   75 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHH---HHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHH---HHhcCCcEEEcchHHHHHHHHHHhCCCcEEEeccc
Confidence            5789999999999999998888877 9999999887654   44555544332222222   223468999999987

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.93  E-value=0.0013  Score=53.68  Aligned_cols=73  Identities=21%  Similarity=0.267  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH-HHHcCCCEEE-eCCCCChhh----------hccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF-VKELGADKVI-DYRKTKYED----------IEEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~-~~~~g~~~v~-~~~~~~~~~----------~~~~~d~  215 (327)
                      .|++++|+||++++|.++++.+... |+++++..+++++.+. ++++|..... .-+-.+..+          ...++|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVRE-GARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHT-TEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            5789999999999999988888877 9999999988776644 4677755432 111111111          1247999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        83 lVnnAg   88 (256)
T d1k2wa_          83 LVNNAA   88 (256)
T ss_dssp             EEECCC
T ss_pred             EEeecc
Confidence            999988

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00026  Score=55.90  Aligned_cols=73  Identities=18%  Similarity=0.191  Sum_probs=52.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g~  222 (327)
                      .++|+|+||+|.+|..++..+... |.++.+.++++++.......+.+.+. |..+ +.+.+.+.+.|.|+.++|.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~   77 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT   77 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEecc
Confidence            478999999999999998877777 89999999988876543334444332 2211 2233456799999999873

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.85  E-value=0.0018  Score=52.76  Aligned_cols=73  Identities=25%  Similarity=0.351  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeC-CCCChhh----------hccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDY-RKTKYED----------IEEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~-~~~~~~~----------~~~~~d~  215 (327)
                      .|+++||+||++++|.+.++.+... |+++++..+++++.+.+ ++++....... +-.+..+          ...++|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            6799999999999999988887777 99999998888776544 66775543321 1122211          1247999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        84 lVnnAG   89 (253)
T d1hxha_          84 LVNNAG   89 (253)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999988

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.84  E-value=0.002  Score=52.20  Aligned_cols=74  Identities=22%  Similarity=0.309  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-E--eCCCCC-hhh-------hccCcc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-I--DYRKTK-YED-------IEEKFD  214 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~--~~~~~~-~~~-------~~~~~d  214 (327)
                      -.|+++||+||++++|.++++.+... |+++++..+++++.+.+ ++++.... +  |-.+.+ ...       ...++|
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence            46899999999999999988877777 99999999988876554 55653222 2  221111 111       124799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus        83 ilinnAG   89 (244)
T d1nffa_          83 VLVNNAG   89 (244)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999988

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.83  E-value=0.0018  Score=52.84  Aligned_cols=73  Identities=27%  Similarity=0.351  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-E--eCCCC-Chhh-------hccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-I--DYRKT-KYED-------IEEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~--~~~~~-~~~~-------~~~~~d~  215 (327)
                      .|+++||+||++++|.+.++.+... |+++++..+++++.+.+ ++++.... +  |-.+. +...       ...++|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            5899999999999999988888777 99999999888776554 55664322 2  22111 1111       1247999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        83 lVnnAg   88 (254)
T d1hdca_          83 LVNNAG   88 (254)
T ss_dssp             EEECCC
T ss_pred             EEecCc
Confidence            999987

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=96.82  E-value=0.0022  Score=50.68  Aligned_cols=98  Identities=18%  Similarity=0.155  Sum_probs=67.7

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEEeCCCCChh--hhccC
Q 020320          139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVIDYRKTKYE--DIEEK  212 (327)
Q Consensus       139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~--~~~~~  212 (327)
                      ..++..++++|++||.+|  ++.|..++.+++.. |.+++.+..+++-.+.+    +++|.+.+.....+...  .....
T Consensus        69 ~ml~~L~l~~g~~VLeIG--sGsGY~taila~l~-g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~p  145 (215)
T d1jg1a_          69 IMLEIANLKPGMNILEVG--TGSGWNAALISEIV-KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAP  145 (215)
T ss_dssp             HHHHHHTCCTTCCEEEEC--CTTSHHHHHHHHHH-CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred             HHHHhhccCccceEEEec--CCCChhHHHHHHhh-CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCc
Confidence            456778999999999998  44577777888877 77788888877644444    55776665432222211  22356


Q ss_pred             ccEEEeCCC--C-chhhhhhhcCCCcEEEe
Q 020320          213 FDVLYDTIG--D-CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       213 ~d~v~d~~g--~-~~~~~~~l~~~g~~v~~  239 (327)
                      +|.++-+.+  . +...+..|++||+++..
T Consensus       146 fD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         146 YDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             EEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            899986654  2 36777899999999875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.80  E-value=0.0018  Score=53.52  Aligned_cols=73  Identities=25%  Similarity=0.372  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEE---eCCCCC-hhh-------hccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVI---DYRKTK-YED-------IEEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~---~~~~~~-~~~-------~~~~~d~  215 (327)
                      .|+++||+||++++|.++++.+... |+++++..+++++++.+ ++++.....   |-.+.+ ...       ...++|+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAE-GAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            5899999999999999988888877 99999999988876544 556643322   222211 111       1247999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        83 lvnnAG   88 (276)
T d1bdba_          83 LIPNAG   88 (276)
T ss_dssp             EECCCC
T ss_pred             cccccc
Confidence            999887

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.0022  Score=52.87  Aligned_cols=72  Identities=18%  Similarity=0.374  Sum_probs=47.4

Q ss_pred             CCEE-EEEcCCchHHHHHHH-HHHhhcCCcEEEEeCCcccHHHH-H---HcCCCE-EEeCCCCChhh----------hcc
Q 020320          149 GQTI-FIVGGAGGVGTLVIQ-LAKHFYGASHVVATTSTPKVEFV-K---ELGADK-VIDYRKTKYED----------IEE  211 (327)
Q Consensus       149 ~~~v-lI~ga~g~~G~~a~~-la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~-v~~~~~~~~~~----------~~~  211 (327)
                      |++| ||+||++++|++++. +++.. |.+++++.+++++.+.+ +   +.+... .+.-+-.+..+          ...
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            6777 899999999998775 55544 88999999998876544 2   234322 22111122211          125


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        81 ~iDiLVnNAG   90 (275)
T d1wmaa1          81 GLDVLVNNAG   90 (275)
T ss_dssp             SEEEEEECCC
T ss_pred             CcEEEEEcCC
Confidence            7999999988

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.78  E-value=0.003  Score=51.25  Aligned_cols=73  Identities=23%  Similarity=0.386  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-----HHcCCCEEE-eCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-----KELGADKVI-DYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-----~~~g~~~v~-~~~~~~~~~----------~~~  211 (327)
                      .|+++||+||++++|.+.++.+... |+++++..+++++.+.+     ++.|..... ..+-.+..+          ...
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999988888877 99999999887765332     345654322 111111111          124


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        83 ~iDiLVnnAG   92 (251)
T d1vl8a_          83 KLDTVVNAAG   92 (251)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.0013  Score=53.27  Aligned_cols=74  Identities=24%  Similarity=0.394  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc-CCCEEE-eCCCCChhh----hccCccEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL-GADKVI-DYRKTKYED----IEEKFDVLYDTI  220 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~-g~~~v~-~~~~~~~~~----~~~~~d~v~d~~  220 (327)
                      -.|+++||+||++++|.+.++.+... |++++++.+++++++.+.+. +..... +....+..+    ...++|.++++.
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~-G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~a   82 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA   82 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecc
Confidence            46899999999999999998888888 99999999998877666543 322222 222111111    225799999998


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      |
T Consensus        83 g   83 (245)
T d2ag5a1          83 G   83 (245)
T ss_dssp             C
T ss_pred             c
Confidence            8

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.75  E-value=0.011  Score=43.92  Aligned_cols=92  Identities=21%  Similarity=0.236  Sum_probs=72.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  223 (327)
                      .-+-.|++++|.| -|-+|..+++-+|.+ |++++++..+|-+.-.+..-|.. +.     ...+..+..|+++-++|..
T Consensus        18 ~~~laGk~vvV~G-YG~vGrG~A~~~rg~-Ga~V~V~E~DPi~alqA~mdGf~-v~-----~~~~a~~~aDi~vTaTGn~   89 (163)
T d1v8ba1          18 DFLISGKIVVICG-YGDVGKGCASSMKGL-GARVYITEIDPICAIQAVMEGFN-VV-----TLDEIVDKGDFFITCTGNV   89 (163)
T ss_dssp             CCCCTTSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSCHHHHHHHHTTTCE-EC-----CHHHHTTTCSEEEECCSSS
T ss_pred             CceecCCEEEEec-ccccchhHHHHHHhC-CCEEEEEecCchhhHHHHhcCCc-cC-----chhHccccCcEEEEcCCCC
Confidence            4467899999999 999999999999999 99999999888654444333332 32     3455677899999999953


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCC
Q 020320          224 ----KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~  243 (327)
                          ...+..|+++..+...|...
T Consensus        90 ~vI~~~h~~~MKdgaIl~N~GHfd  113 (163)
T d1v8ba1          90 DVIKLEHLLKMKNNAVVGNIGHFD  113 (163)
T ss_dssp             SSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             ccccHHHHHHhhCCeEEEeccccc
Confidence                56788999999998888654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.71  E-value=0.0033  Score=51.27  Aligned_cols=73  Identities=18%  Similarity=0.279  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-E--eCCCC-Chhh-------hccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-I--DYRKT-KYED-------IEEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~--~~~~~-~~~~-------~~~~  212 (327)
                      .|+++||+||++++|.+++..+... |+++++..+++++.+.+    ++.|.+.. +  |-.+. +...       ...+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999988877777 99999999988876544    23454332 1  21111 1111       1257


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        83 iDilVnnaG   91 (260)
T d1zema1          83 IDFLFNNAG   91 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCeehhhhc
Confidence            999999887

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.0027  Score=51.75  Aligned_cols=73  Identities=25%  Similarity=0.369  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEE-eCCCCChhh----------hccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVI-DYRKTKYED----------IEEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~-~~~~~~~~~----------~~~~  212 (327)
                      .|+++||+||++++|.+.++.+... |+++++..+++++.+.+    ++.|..... ..+-.+..+          ...+
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999988888877 99999999888765544    345544322 211122111          1257


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        89 iDilvnnAG   97 (255)
T d1fmca_          89 VDILVNNAG   97 (255)
T ss_dssp             CCEEEECCC
T ss_pred             CCEeeeCCc
Confidence            999999987

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.67  E-value=0.0044  Score=50.78  Aligned_cols=73  Identities=29%  Similarity=0.534  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCC---EEEeCCCCChhh----------hccCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGAD---KVIDYRKTKYED----------IEEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~---~v~~~~~~~~~~----------~~~~~  213 (327)
                      .|+++||+||++++|.+.++.+... |++++++.+++++.+.+ ++++..   ..+.-+-.+..+          ...++
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            6899999999999999988888777 99999999988876555 445421   112111112111          12479


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus        84 D~lVnnAG   91 (268)
T d2bgka1          84 DIMFGNVG   91 (268)
T ss_dssp             CEEEECCC
T ss_pred             ceeccccc
Confidence            99999987

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.66  E-value=0.0021  Score=51.95  Aligned_cols=73  Identities=21%  Similarity=0.343  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE---EeCCCCC-hhh-------hccCccE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV---IDYRKTK-YED-------IEEKFDV  215 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v---~~~~~~~-~~~-------~~~~~d~  215 (327)
                      .|++++|+||++++|.+.++.+... |+++++..+++++.+.+ ++++....   .|-.+.+ ...       ...++|+
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAAR-GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            5889999999999999988888877 99999999988876554 55654321   2222211 111       1247999


Q ss_pred             EEeCCC
Q 020320          216 LYDTIG  221 (327)
Q Consensus       216 v~d~~g  221 (327)
                      +++++|
T Consensus        82 lVnnAg   87 (243)
T d1q7ba_          82 LVNNAG   87 (243)
T ss_dssp             EEECCC
T ss_pred             ehhhhh
Confidence            999987

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.0046  Score=49.89  Aligned_cols=73  Identities=23%  Similarity=0.294  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-EeCCCCChhh----------hccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-IDYRKTKYED----------IEEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~----------~~~~  212 (327)
                      .|+.++|+||++++|.+.+..+... |+++++..+++++++.+    ++.|.... +..+-.+..+          ...+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~-G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999877777667 99999999998876544    34554322 2222222221          1247


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        85 idilinnag   93 (244)
T d1yb1a_          85 VSILVNNAG   93 (244)
T ss_dssp             CSEEEECCC
T ss_pred             CceeEeecc
Confidence            999999988

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.63  E-value=0.0068  Score=49.67  Aligned_cols=73  Identities=23%  Similarity=0.328  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC-cccHH----HHHHcCCCEEEe-CCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS-TPKVE----FVKELGADKVID-YRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~-~~~~~----~~~~~g~~~v~~-~~~~~~~~----------~~~  211 (327)
                      .|+++||+||++++|.+.++.+... |+++++..++ ++..+    .+++.+.+.... .+-.+..+          ...
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999998888888 9999988765 33332    234556544321 12222111          124


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|+++++.|
T Consensus        96 ~idilV~nag  105 (272)
T d1g0oa_          96 KLDIVCSNSG  105 (272)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCccccccc
Confidence            7899999887

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.63  E-value=0.0034  Score=51.02  Aligned_cols=74  Identities=15%  Similarity=0.177  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEE----eCCCC--Chhhh-------c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVI----DYRKT--KYEDI-------E  210 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~----~~~~~--~~~~~-------~  210 (327)
                      .|+++||+||++++|.+++..+... |+++++..++.++.+.+++    .+...+.    |...+  ...+.       .
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~-G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKR-NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999988777777 9999988876665544433    2322221    22111  11111       1


Q ss_pred             cCccEEEeCCCC
Q 020320          211 EKFDVLYDTIGD  222 (327)
Q Consensus       211 ~~~d~v~d~~g~  222 (327)
                      .++|++++++|.
T Consensus        83 g~iDilvnnAG~   94 (254)
T d1sbya1          83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEeCCCC
Confidence            479999999983

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.60  E-value=0.0066  Score=45.84  Aligned_cols=73  Identities=14%  Similarity=0.228  Sum_probs=51.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEE
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      .++..+..++++|+|+| +|+.+.+++..++.. |+ ++.++.++.++.+.+ +.++... ++..      ....+|+++
T Consensus         8 ~l~~~~~~~~~~vlIlG-aGGaarai~~aL~~~-g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~------~~~~~DliI   78 (167)
T d1npya1           8 LIEKYHLNKNAKVIVHG-SGGMAKAVVAAFKNS-GFEKLKIYARNVKTGQYLAALYGYAY-INSL------ENQQADILV   78 (167)
T ss_dssp             HHHHTTCCTTSCEEEEC-SSTTHHHHHHHHHHT-TCCCEEEECSCHHHHHHHHHHHTCEE-ESCC------TTCCCSEEE
T ss_pred             HHHHcCCCCCCeEEEEC-CCHHHHHHHHHHHHC-CCCEEEEecccHHHHHHHHHhhhhhh-hhcc------cccchhhhe
Confidence            45667777889999999 899999999999988 76 556666888766555 4555433 2211      123589999


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      +|+.
T Consensus        79 NaTp   82 (167)
T d1npya1          79 NVTS   82 (167)
T ss_dssp             ECSS
T ss_pred             eccc
Confidence            9864

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.58  E-value=0.0054  Score=49.91  Aligned_cols=73  Identities=21%  Similarity=0.378  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEE---eCCCCChhh--------hc-c
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVI---DYRKTKYED--------IE-E  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~---~~~~~~~~~--------~~-~  211 (327)
                      .|+++||+||++++|.+.++.+... |++++++.+++++.+.+    ++.+.....   |-.+.+..+        .. .
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~-G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999998777777 99999999988775544    334544322   222211111        11 2


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ..|++++++|
T Consensus        84 ~idilinnag   93 (258)
T d1ae1a_          84 KLNILVNNAG   93 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CcEEEecccc
Confidence            4899999887

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.57  E-value=0.0039  Score=50.26  Aligned_cols=74  Identities=23%  Similarity=0.304  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEE---eCCCC-Chhh-------hccCcc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVI---DYRKT-KYED-------IEEKFD  214 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~---~~~~~-~~~~-------~~~~~d  214 (327)
                      -.|+++||+||++++|.+.++-+... |+++++..+++++.+.+ ++++.+...   |-.+. +..+       ...++|
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            36899999999999999988888877 99999999888866444 567754332   22111 1111       114799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus        82 iLinnAg   88 (241)
T d2a4ka1          82 GVAHFAG   88 (241)
T ss_dssp             EEEEGGG
T ss_pred             Eeccccc
Confidence            9999876

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.0032  Score=51.16  Aligned_cols=42  Identities=17%  Similarity=0.193  Sum_probs=36.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .|+++||+||++++|.++++.+... |++++++.+++++.+.+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~   43 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQC   43 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5899999999999999998888877 99999999988876544

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.56  E-value=0.0055  Score=49.83  Aligned_cols=72  Identities=19%  Similarity=0.276  Sum_probs=49.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEE---eCCCCC-hhh-------hccCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVI---DYRKTK-YED-------IEEKF  213 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~---~~~~~~-~~~-------~~~~~  213 (327)
                      |+.+||+||++++|.+.+..+... |+++++..+++++.+.+    ++.|.....   |-.+.+ ...       ...++
T Consensus         2 gKValITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            678899999999999988877777 99999999988766544    345544322   222211 111       12479


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus        81 DilVnnAG   88 (257)
T d2rhca1          81 DVLVNNAG   88 (257)
T ss_dssp             SEEEECCC
T ss_pred             CEEEeccc
Confidence            99999988

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.55  E-value=0.0049  Score=51.12  Aligned_cols=73  Identities=19%  Similarity=0.339  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-----HHcCCCEE-EeCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-----KELGADKV-IDYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-----~~~g~~~v-~~~~~~~~~~----------~~~  211 (327)
                      .|+++||+||++++|.+++..+... |+++++..+++++.+.+     .+.|.... +..+-.+...          ...
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~-Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            5799999999999999988877777 99999999887765332     23454332 2222222111          125


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|+++++.|
T Consensus       103 ~iDilvnnAg  112 (294)
T d1w6ua_         103 HPNIVINNAA  112 (294)
T ss_dssp             SCSEEEECCC
T ss_pred             ccchhhhhhh
Confidence            7999999987

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.54  E-value=0.0071  Score=48.82  Aligned_cols=73  Identities=21%  Similarity=0.310  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc--HHHHHHcCCCEEE-eCCCCChhh----------hccCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK--VEFVKELGADKVI-DYRKTKYED----------IEEKFD  214 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~--~~~~~~~g~~~v~-~~~~~~~~~----------~~~~~d  214 (327)
                      .|+.+||+||++++|.++++.+... |+++++..+++++  ...++++|..... .-+-.+..+          ...++|
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999988888777 9999998876543  2444667754332 111112111          124799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus        83 ilVnnAG   89 (247)
T d2ew8a1          83 ILVNNAG   89 (247)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.53  E-value=0.0042  Score=50.65  Aligned_cols=73  Identities=22%  Similarity=0.254  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-----HHcCCCEEE-eCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-----KELGADKVI-DYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-----~~~g~~~v~-~~~~~~~~~----------~~~  211 (327)
                      .|+++||+||++++|.++++.+... |++++++.+++++...+     ++.|..... .-+-.+..+          ...
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999988888877 99999999887765332     345644322 111111111          124


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|+++++.|
T Consensus        87 ~iDilVnnAg   96 (260)
T d1h5qa_          87 PISGLIANAG   96 (260)
T ss_dssp             SEEEEEECCC
T ss_pred             CCcEeccccc
Confidence            7999999987

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=96.51  E-value=0.0055  Score=48.65  Aligned_cols=96  Identities=14%  Similarity=0.142  Sum_probs=63.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC--CCEE--EeCCCCChhhhccCccE
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG--ADKV--IDYRKTKYEDIEEKFDV  215 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g--~~~v--~~~~~~~~~~~~~~~d~  215 (327)
                      .++...+++|++||-+| +| .|..++.+++ + +.+++.+..+++..+.+++.-  ...+  +..+..........+|.
T Consensus        62 ml~~L~l~~g~~VLdIG-~G-sGy~ta~La~-l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~~~~pfD~  137 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIG-TG-IGYYTALIAE-I-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDR  137 (224)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHH-H-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEE
T ss_pred             HHHHhhhcccceEEEec-CC-CCHHHHHHHH-H-hcccccccccHHHHHHHHHHHhcccccccccCchhhcchhhhhHHH
Confidence            56778999999999999 45 5666777777 4 678888888888777776531  2222  22111111112245899


Q ss_pred             EEeCCC--C-chhhhhhhcCCCcEEEe
Q 020320          216 LYDTIG--D-CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       216 v~d~~g--~-~~~~~~~l~~~g~~v~~  239 (327)
                      ++-+.+  . +...+..|++||+++..
T Consensus       138 Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         138 VVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             EEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             HHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence            885543  2 25667899999999875

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0037  Score=50.91  Aligned_cols=73  Identities=19%  Similarity=0.323  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCC-CEEE----eCCCC-Chhh-------hc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGA-DKVI----DYRKT-KYED-------IE  210 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~-~~v~----~~~~~-~~~~-------~~  210 (327)
                      +|+++||+||++++|.+++..+... |++++++.+++++.+.+    ++.+. ..++    |-.+. +...       ..
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~-G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999988888877 99999999988876554    22332 2222    22221 1111       12


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus        88 g~iD~lVnnAg   98 (257)
T d1xg5a_          88 SGVDICINNAG   98 (257)
T ss_dssp             CCCSEEEECCC
T ss_pred             CCCCEEEeccc
Confidence            57999999987

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.45  E-value=0.0052  Score=49.99  Aligned_cols=75  Identities=25%  Similarity=0.260  Sum_probs=50.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC-cccHH----HHHHcCCCEEE-eCCCCChhh----------h
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS-TPKVE----FVKELGADKVI-DYRKTKYED----------I  209 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~-~~~~~----~~~~~g~~~v~-~~~~~~~~~----------~  209 (327)
                      +-.|+++||+||++++|.+.++.+... |+++++..++ ++..+    .+++.|.+... ..+-.+..+          .
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~-G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRR-GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            456899999999999999988888777 9999887654 33333    33456655432 222222221          1


Q ss_pred             ccCccEEEeCCC
Q 020320          210 EEKFDVLYDTIG  221 (327)
Q Consensus       210 ~~~~d~v~d~~g  221 (327)
                      ..++|++++++|
T Consensus        82 ~g~idilinnag   93 (259)
T d1ja9a_          82 FGGLDFVMSNSG   93 (259)
T ss_dssp             HSCEEEEECCCC
T ss_pred             cCCCcEEEeccc
Confidence            247999999988

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.45  E-value=0.0053  Score=49.73  Aligned_cols=73  Identities=18%  Similarity=0.249  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCC--CE-EEeCCCCChhh----------hccCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGA--DK-VIDYRKTKYED----------IEEKF  213 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~--~~-v~~~~~~~~~~----------~~~~~  213 (327)
                      .|+++||+||++++|.+.++.+... |+++++..+++++.+.+ ++++.  .. .+..+-.+..+          ...++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            5899999999999999988887777 99999999988876655 34432  11 12111122111          12579


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus        84 DiLVnnAg   91 (251)
T d1zk4a1          84 STLVNNAG   91 (251)
T ss_dssp             CEEEECCC
T ss_pred             eEEEeccc
Confidence            99999987

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.45  E-value=0.0048  Score=46.78  Aligned_cols=80  Identities=16%  Similarity=0.272  Sum_probs=51.0

Q ss_pred             HHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEE
Q 020320          139 EGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       139 ~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v  216 (327)
                      ++++..+ ..+|++|+|+| +|+.+.+++..+..+ |.++.++-|+.++.+.+ +.+.....+..... .......+|++
T Consensus         7 ~~l~~~~~~~~~k~vlIlG-aGGaarai~~al~~~-g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~-~~~~~~~~dli   83 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIG-AGGASRGVLLPLLSL-DCAVTITNRTVSRAEELAKLFAHTGSIQALSM-DELEGHEFDLI   83 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHHTGGGSSEEECCS-GGGTTCCCSEE
T ss_pred             HHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHhccc-ceEEEeccchHHHHHHHHHHHhhccccccccc-cccccccccee
Confidence            3454433 45789999999 899999999988888 88877777887776554 33331111111110 11123468999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++|+.
T Consensus        84 IN~Tp   88 (170)
T d1nyta1          84 INATS   88 (170)
T ss_dssp             EECCS
T ss_pred             ecccc
Confidence            99975

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.44  E-value=0.01  Score=48.03  Aligned_cols=73  Identities=18%  Similarity=0.223  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEEEeCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKVIDYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~----------~~~  211 (327)
                      .|+++||+||+|  ++|.+.++.+... |+++++..++++..+.++    ..+....+..+-.+..+          ...
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~-Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            589999999877  7999988777777 999988888776554443    23433334322222221          124


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        86 ~iDilVnnag   95 (256)
T d1ulua_          86 GLDYLVHAIA   95 (256)
T ss_dssp             SEEEEEECCC
T ss_pred             CceEEEeccc
Confidence            7999999886

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.44  E-value=0.0064  Score=49.91  Aligned_cols=73  Identities=21%  Similarity=0.358  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCC--CEE--EeCCCCChhh----------h
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGA--DKV--IDYRKTKYED----------I  209 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~--~~v--~~~~~~~~~~----------~  209 (327)
                      .|++++|+||++++|.++++.+... |+++++..+++++++.+    ++.+.  ..+  +..+-.+..+          .
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5899999999999999988888777 99999999988876544    23332  122  2111122111          1


Q ss_pred             ccCccEEEeCCC
Q 020320          210 EEKFDVLYDTIG  221 (327)
Q Consensus       210 ~~~~d~v~d~~g  221 (327)
                      ..++|++++++|
T Consensus        82 ~G~iDilVnnAG   93 (274)
T d1xhla_          82 FGKIDILVNNAG   93 (274)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCceEEEeecc
Confidence            147999999987

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.42  E-value=0.0051  Score=50.07  Aligned_cols=42  Identities=24%  Similarity=0.338  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .|+++||+||++++|.++++.+... |+++++..+++++.+.+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~   44 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEAS   44 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999988888877 99999999988876544

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.41  E-value=0.0056  Score=49.59  Aligned_cols=73  Identities=15%  Similarity=0.280  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEE-eCCCCChhh----------hccC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVI-DYRKTKYED----------IEEK  212 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~-~~~~~~~~~----------~~~~  212 (327)
                      .++.+||+||++++|.+++..+... |+++++..+++++.+.+    ++.|..... ..+-.+..+          ...+
T Consensus         9 enKvalITGas~GIG~a~a~~la~~-Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4788999999999999988888777 99999999988776544    334543322 111111111          1257


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|+++++.|
T Consensus        88 iDilvnnag   96 (251)
T d2c07a1          88 VDILVNNAG   96 (251)
T ss_dssp             CCEEEECCC
T ss_pred             ceeeeeccc
Confidence            999999887

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.36  E-value=0.0072  Score=49.17  Aligned_cols=73  Identities=19%  Similarity=0.333  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-E--eCCCCC-hhh-------hcc-
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-I--DYRKTK-YED-------IEE-  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~--~~~~~~-~~~-------~~~-  211 (327)
                      .|+++||+||++++|.++++.+... |+++++..+++++.+.+    ++.+.... +  |-.+.+ ...       ... 
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999988888777 99999999988776544    23343222 2  222211 111       113 


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        86 ~idilvnnAG   95 (259)
T d2ae2a_          86 KLNILVNNAG   95 (259)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            5899999988

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.33  E-value=0.0072  Score=49.52  Aligned_cols=42  Identities=24%  Similarity=0.405  Sum_probs=36.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .|+++||+||++++|.+.+..+... |+++++..+++++++.+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~l~~r~~~~l~~~   45 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEET   45 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999988888777 99999999988876554

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.30  E-value=0.0063  Score=49.61  Aligned_cols=73  Identities=23%  Similarity=0.293  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cHH----HHHHcCCCEEE-eCCCCChhh----------hcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVE----FVKELGADKVI-DYRKTKYED----------IEE  211 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~~----~~~~~g~~~v~-~~~~~~~~~----------~~~  211 (327)
                      .|++++|+||++++|.+.++.+... |+++++..++.+ +.+    .+++.|.+... .-+-.+..+          ...
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999988777777 999999887654 332    23445543322 111122111          124


Q ss_pred             CccEEEeCCC
Q 020320          212 KFDVLYDTIG  221 (327)
Q Consensus       212 ~~d~v~d~~g  221 (327)
                      ++|++++++|
T Consensus        85 ~iDiLVnnAG   94 (261)
T d1geea_          85 KLDVMINNAG   94 (261)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEeeccce
Confidence            7999999987

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0096  Score=49.44  Aligned_cols=44  Identities=23%  Similarity=0.488  Sum_probs=37.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .-.|+++||+||++++|.++++.+... |+++++..+++++.+.+
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~-Ga~Vvi~~r~~~~l~~~   52 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSA   52 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            347899999999999999988887777 99999999988776443

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.26  E-value=0.0094  Score=48.55  Aligned_cols=42  Identities=19%  Similarity=0.305  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .|+.+||+||++++|.+.++.+... |+++++..+++++++.+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~   45 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEET   45 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999988877777 99999999988876544

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.20  E-value=0.012  Score=47.67  Aligned_cols=71  Identities=17%  Similarity=0.312  Sum_probs=48.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-EeCCCCChhh----------hccCcc
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-IDYRKTKYED----------IEEKFD  214 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~----------~~~~~d  214 (327)
                      +.+||+||++++|.+.+..+... |+++++..+++++.+.+    ++.|.+.. +.-+-.+..+          ...++|
T Consensus         2 KValITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            45699999999999988777777 99999999988876544    34454432 2111122211          124799


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      ++++++|
T Consensus        81 ilVnnAG   87 (255)
T d1gega_          81 VIVNNAG   87 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999987

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.16  E-value=0.0081  Score=48.85  Aligned_cols=42  Identities=19%  Similarity=0.404  Sum_probs=36.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      .|+++||+||++++|.+++..+... |+++++..+++++.+.+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~l~~~   48 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNEC   48 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5899999999999999988888877 99999999988776544

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.11  E-value=0.017  Score=43.07  Aligned_cols=77  Identities=21%  Similarity=0.383  Sum_probs=54.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccH-HHHHHcCCCEEEeCCCCChhhhccCccEEEeC
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKV-EFVKELGADKVIDYRKTKYEDIEEKFDVLYDT  219 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~  219 (327)
                      +..+--.+.+++|+| +|.+|.+++..+... |++.+.+. ++.++. +++++++.. +.+.  +++...+..+|++|.|
T Consensus        17 ~~~~~l~~~~ilviG-aG~~g~~v~~~L~~~-g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~--~~~~~~l~~~Divi~a   91 (159)
T d1gpja2          17 RELGSLHDKTVLVVG-AGEMGKTVAKSLVDR-GVRAVLVANRTYERAVELARDLGGE-AVRF--DELVDHLARSDVVVSA   91 (159)
T ss_dssp             HHHSCCTTCEEEEES-CCHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHHHHHTCE-ECCG--GGHHHHHHTCSEEEEC
T ss_pred             HHhCCcccCeEEEEC-CCHHHHHHHHHHHhc-CCcEEEEEcCcHHHHHHHHHhhhcc-cccc--hhHHHHhccCCEEEEe
Confidence            344445778999999 699999999988888 88655444 676654 566778754 2222  2344456789999999


Q ss_pred             CCCc
Q 020320          220 IGDC  223 (327)
Q Consensus       220 ~g~~  223 (327)
                      +++.
T Consensus        92 tss~   95 (159)
T d1gpja2          92 TAAP   95 (159)
T ss_dssp             CSSS
T ss_pred             cCCC
Confidence            9853

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.06  E-value=0.0059  Score=49.35  Aligned_cols=97  Identities=14%  Similarity=0.201  Sum_probs=61.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cC-CCEEEeCCCCChhhhc--c
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LG-ADKVIDYRKTKYEDIE--E  211 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g-~~~v~~~~~~~~~~~~--~  211 (327)
                      .+...+++||++||=.| +|. |.++..+|+..+ +.+++.++.+++..+.+++    ++ .+.+-.. ..+..+..  .
T Consensus        77 Ii~~l~i~pG~rVLEiG-~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~-~~Di~~~~~~~  153 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVG-VGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTS-RSDIADFISDQ  153 (250)
T ss_dssp             ----CCCCTTCEEEEEC-CTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEE-CSCTTTCCCSC
T ss_pred             HHHHcCCCCcCEEEEee-eeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEE-Eeeeecccccc
Confidence            34678999999999998 554 667777888762 2467788888888877754    22 3332211 11222222  3


Q ss_pred             CccEEEeCCCC----chhhhhhhcCCCcEEEe
Q 020320          212 KFDVLYDTIGD----CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       212 ~~d~v~d~~g~----~~~~~~~l~~~g~~v~~  239 (327)
                      .+|.++--...    +..+.+.|+|||+++.+
T Consensus       154 ~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~  185 (250)
T d1yb2a1         154 MYDAVIADIPDPWNHVQKIASMMKPGSVATFY  185 (250)
T ss_dssp             CEEEEEECCSCGGGSHHHHHHTEEEEEEEEEE
T ss_pred             eeeeeeecCCchHHHHHHHHHhcCCCceEEEE
Confidence            58988844442    36778999999999875

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.05  E-value=0.008  Score=49.61  Aligned_cols=97  Identities=16%  Similarity=0.239  Sum_probs=64.8

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhhccCccEE
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~d~v  216 (327)
                      ++.+++++|++||=+| || .|..++.+|+.. |+++..++.|+++.+++++    .|...-+.....++......+|.+
T Consensus        55 ~~~l~l~~G~~VLDiG-CG-~G~~a~~~a~~~-g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~fD~i  131 (285)
T d1kpga_          55 LGKLGLQPGMTLLDVG-CG-WGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRI  131 (285)
T ss_dssp             HTTTTCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEE
T ss_pred             HHHcCCCCCCEEEEec-Cc-chHHHHHHHhcC-CcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhcccccccce
Confidence            3678999999999998 65 466788899988 9999999999998887754    332111111122333333457776


Q ss_pred             Ee-----CCCCc------hhhhhhhcCCCcEEEee
Q 020320          217 YD-----TIGDC------KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       217 ~d-----~~g~~------~~~~~~l~~~g~~v~~g  240 (327)
                      +.     .+|..      ..+.++|+|+|+++.-.
T Consensus       132 ~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         132 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             eeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence            53     23321      34567899999998643

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.00  E-value=0.012  Score=47.75  Aligned_cols=73  Identities=22%  Similarity=0.327  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-ccHHHH-----HHcCCCEEEe-CCCCChhh----------hc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFV-----KELGADKVID-YRKTKYED----------IE  210 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-~~~~~~-----~~~g~~~v~~-~~~~~~~~----------~~  210 (327)
                      .|+++||+||++++|.+.+..+... |+++++..+++ ++.+.+     ++.|...... -+-.+..+          ..
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6889999999999999988777777 99999888764 333332     2345443321 11122111          11


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      .++|++++++|
T Consensus        82 G~iDiLVnnAG   92 (260)
T d1x1ta1          82 GRIDILVNNAG   92 (260)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCcEEEeecc
Confidence            47999999988

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0046  Score=50.66  Aligned_cols=43  Identities=23%  Similarity=0.401  Sum_probs=37.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      -.|+++||+||++++|.+++..+... |++++++.+++++++.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~-G~~Vil~~r~~~~l~~~   54 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKV   54 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            46899999999999999988888777 99999999998877655

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.85  E-value=0.021  Score=45.79  Aligned_cols=71  Identities=20%  Similarity=0.294  Sum_probs=46.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHH----HHcCCCEE-EeCCCCChhh----------hccCc
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFV----KELGADKV-IDYRKTKYED----------IEEKF  213 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~----~~~g~~~v-~~~~~~~~~~----------~~~~~  213 (327)
                      +.+||+||++++|.+.++.+... |+++++.+ +++++.+.+    ++.|.... +.-+-.+..+          ...++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~-Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKA-GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999988877777 99998876 455544433    34554322 2111122111          12479


Q ss_pred             cEEEeCCC
Q 020320          214 DVLYDTIG  221 (327)
Q Consensus       214 d~v~d~~g  221 (327)
                      |++++++|
T Consensus        81 DiLVnnAg   88 (244)
T d1edoa_          81 DVVVNNAG   88 (244)
T ss_dssp             SEEEECCC
T ss_pred             Cccccccc
Confidence            99999987

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.83  E-value=0.014  Score=48.50  Aligned_cols=73  Identities=25%  Similarity=0.395  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc---------cH-HHHHH---cCCCEEEeCCCCC-hhh-----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP---------KV-EFVKE---LGADKVIDYRKTK-YED-----  208 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~---------~~-~~~~~---~g~~~v~~~~~~~-~~~-----  208 (327)
                      .|+++||+||++++|.+.+..+... |+++++.+++.+         .. +..++   .+.....+..+.+ ..+     
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~-Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAER-GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            5899999999999999988877777 999988865332         12 22222   2333334433322 111     


Q ss_pred             --hccCccEEEeCCC
Q 020320          209 --IEEKFDVLYDTIG  221 (327)
Q Consensus       209 --~~~~~d~v~d~~g  221 (327)
                        ...++|++++++|
T Consensus        85 ~~~~G~iDiLVnNAG   99 (302)
T d1gz6a_          85 LDTFGRIDVVVNNAG   99 (302)
T ss_dssp             HHHTSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCc
Confidence              1257999999988

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.82  E-value=0.012  Score=46.85  Aligned_cols=37  Identities=19%  Similarity=0.416  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      +.+|||+||++++|.+.++.+... |++++.+.+++++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~-G~~V~~~~~~~~~   38 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKN-GYTVLNIDLSAND   38 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCchh
Confidence            357899999999999998888888 9999998877553

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0087  Score=48.19  Aligned_cols=48  Identities=31%  Similarity=0.386  Sum_probs=39.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGAD  196 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~  196 (327)
                      +|+.+||+||++++|.+.++.+... |+++++..+++++.+.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCC
Confidence            6899999999999999988888877 99999999887766544 567644

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.77  E-value=0.038  Score=41.73  Aligned_cols=87  Identities=14%  Similarity=0.104  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-------eC---CCCChhhhccCccEEEe
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-------DY---RKTKYEDIEEKFDVLYD  218 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-------~~---~~~~~~~~~~~~d~v~d  218 (327)
                      .+++.|+| +|.+|++.+..+... |..+.+.++++++.+.+++.+.....       ..   ...+..+.+..+|++|-
T Consensus         1 sk~iaIiG-aG~~G~~~A~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii   78 (184)
T d1bg6a2           1 SKTYAVLG-LGNGGHAFAAYLALK-GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI   78 (184)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence            36899999 899999998888887 99999999999888888765532111       00   01234445678999999


Q ss_pred             CCCCc------hhhhhhhcCCCcEE
Q 020320          219 TIGDC------KNSFVVAKDNAPIV  237 (327)
Q Consensus       219 ~~g~~------~~~~~~l~~~g~~v  237 (327)
                      ++...      ......+.++..++
T Consensus        79 ~v~~~~~~~~~~~i~~~l~~~~~iv  103 (184)
T d1bg6a2          79 VVPAIHHASIAANIASYISEGQLII  103 (184)
T ss_dssp             CSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred             EEchhHHHHHHHHhhhccCCCCEEE
Confidence            98743      22334455555443

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.77  E-value=0.017  Score=46.43  Aligned_cols=72  Identities=14%  Similarity=0.216  Sum_probs=47.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHHHcCCCE--EEeCCCCChhh------hc------cC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVKELGADK--VIDYRKTKYED------IE------EK  212 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~------~~------~~  212 (327)
                      .++|||+||++++|.++++.+... |+  .++...+++++.+.+++.....  ++.-+-.+..+      .+      .+
T Consensus         3 ~KtilITGassGIG~a~a~~la~~-G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKD-KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTC-TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC-CCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence            478999999999999988776666 64  5666778888877776643222  22211122211      11      24


Q ss_pred             ccEEEeCCC
Q 020320          213 FDVLYDTIG  221 (327)
Q Consensus       213 ~d~v~d~~g  221 (327)
                      +|++++++|
T Consensus        82 idilinnAG   90 (250)
T d1yo6a1          82 LSLLINNAG   90 (250)
T ss_dssp             CCEEEECCC
T ss_pred             eEEEEEcCc
Confidence            899999988

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.74  E-value=0.014  Score=48.31  Aligned_cols=97  Identities=15%  Similarity=0.253  Sum_probs=64.7

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEEeCCCCChhhhccCccEE
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVIDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~d~v  216 (327)
                      ++.+++++|++||=+| ||-=| .+..+|+.. |++++.++.++++.+.+    ++.|....+.....++......+|.|
T Consensus        54 ~~~l~l~~G~~VLDiG-CG~G~-~~~~~a~~~-g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~fD~i  130 (291)
T d1kpia_          54 LDKLNLEPGMTLLDIG-CGWGS-TMRHAVAEY-DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRI  130 (291)
T ss_dssp             HHTTCCCTTCEEEEET-CTTSH-HHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEE
T ss_pred             HHhcCCCCCCEEEEec-CcchH-HHHHHHHhc-CcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcccccccccceE
Confidence            3679999999999999 77544 567888887 99999999998876655    44564332222222333333468887


Q ss_pred             Ee-----CCCC-------------chhhhhhhcCCCcEEEee
Q 020320          217 YD-----TIGD-------------CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       217 ~d-----~~g~-------------~~~~~~~l~~~g~~v~~g  240 (327)
                      +.     .++.             ...+.++|+|+|+++.-.
T Consensus       131 ~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         131 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             EEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             eechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            63     2222             133568999999998653

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.66  E-value=0.036  Score=45.02  Aligned_cols=74  Identities=19%  Similarity=0.179  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhh----------hc
Q 020320          147 KTGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYED----------IE  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~----------~~  210 (327)
                      -.|+++||+||+|  ++|.+++..+... |++++++.++++..+.+++    .+...+...+..+...          ..
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~-Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            3589999999876  7999988888887 9999999988764444432    2222222222221111          12


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      ..+|+++.+.|
T Consensus        82 g~id~lV~nag   92 (274)
T d2pd4a1          82 GSLDFIVHSVA   92 (274)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCCCeEEeecc
Confidence            47899998887

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.63  E-value=0.013  Score=42.11  Aligned_cols=71  Identities=15%  Similarity=0.246  Sum_probs=53.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCChhhh--ccCccEEEeCCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTKYEDI--EEKFDVLYDTIGD  222 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~--~~~~d~v~d~~g~  222 (327)
                      ++++|+| .|.+|..+++.+... |..+++++.++++.+.+.+.+...++ +..+.+....  +..+|.++-+++.
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~-g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~   74 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRM-GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA   74 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHT-TCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHC-CCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCc
Confidence            3588888 899999999999988 99999999999999888887765443 2222222222  3578888877764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.62  E-value=0.033  Score=44.74  Aligned_cols=74  Identities=26%  Similarity=0.317  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhh----------c
Q 020320          147 KTGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDI----------E  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~----------~  210 (327)
                      -.|+++||+||++  ++|.+++..+... |+++++..++++..+.+++    .+.......+..+..+.          .
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~-G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            4689999999888  7888877777766 9999988888776555433    44444433333322221          1


Q ss_pred             cCccEEEeCCC
Q 020320          211 EKFDVLYDTIG  221 (327)
Q Consensus       211 ~~~d~v~d~~g  221 (327)
                      ...|.++++++
T Consensus        82 ~~~d~~v~~a~   92 (258)
T d1qsga_          82 PKFDGFVHSIG   92 (258)
T ss_dssp             SSEEEEEECCC
T ss_pred             cccceEEEeec
Confidence            46789998865

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.026  Score=44.61  Aligned_cols=100  Identities=12%  Similarity=0.028  Sum_probs=62.2

Q ss_pred             HHHHhc--CCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHH----HcC-----CCEE--EeCCCC
Q 020320          139 EGFKTA--GFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVK----ELG-----ADKV--IDYRKT  204 (327)
Q Consensus       139 ~~l~~~--~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~----~~g-----~~~v--~~~~~~  204 (327)
                      ..++..  .+++|++||-.| || .|..++.+++..+ ..+++.+..+++..+.++    +.+     .+.+  ...+..
T Consensus        65 ~~le~L~~~l~~g~~VLdiG-~G-sGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~  142 (224)
T d1i1na_          65 YALELLFDQLHEGAKALDVG-SG-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR  142 (224)
T ss_dssp             HHHHHTTTTSCTTCEEEEET-CT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG
T ss_pred             HHHHHHhhccCCCCeEEEec-CC-CCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecc
Confidence            455543  789999999998 43 4667777777762 246777778877665553    222     1222  111111


Q ss_pred             ChhhhccCccEEEeCCC--C-chhhhhhhcCCCcEEEee
Q 020320          205 KYEDIEEKFDVLYDTIG--D-CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       205 ~~~~~~~~~d~v~d~~g--~-~~~~~~~l~~~g~~v~~g  240 (327)
                      ........+|+++-+..  . +...++.|++||+++..-
T Consensus       143 ~~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~pv  181 (224)
T d1i1na_         143 MGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  181 (224)
T ss_dssp             GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cccchhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEEE
Confidence            11112246899986654  2 367789999999998753

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.54  E-value=0.019  Score=47.18  Aligned_cols=97  Identities=15%  Similarity=0.232  Sum_probs=64.5

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhhccCccEE
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~d~v  216 (327)
                      ++..++++|++||=+| ||.=| .+..+++.. |++++.++.++++.+.+++    .|....+.....++......+|.+
T Consensus        45 ~~~l~l~~g~~VLDiG-CG~G~-~a~~~a~~~-g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~~~~~fD~i  121 (280)
T d2fk8a1          45 LDKLDLKPGMTLLDIG-CGWGT-TMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRI  121 (280)
T ss_dssp             HTTSCCCTTCEEEEES-CTTSH-HHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEE
T ss_pred             HHHcCCCCCCEEEEec-CCchH-HHHHHHHhC-ceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhhhhccchhhh
Confidence            3578999999999999 77545 456788877 9999999999998877754    343222211222333334568887


Q ss_pred             EeC-----CCCc------hhhhhhhcCCCcEEEee
Q 020320          217 YDT-----IGDC------KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       217 ~d~-----~g~~------~~~~~~l~~~g~~v~~g  240 (327)
                      +..     ++..      ....++|+|+|+++.-.
T Consensus       122 ~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         122 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             hHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence            632     2211      34568899999998743

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.53  E-value=0.004  Score=50.03  Aligned_cols=69  Identities=16%  Similarity=0.259  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC-hhh-------hccCccEEEeC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK-YED-------IEEKFDVLYDT  219 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~-------~~~~~d~v~d~  219 (327)
                      .|+++||+||++++|.++++.+... |+++++..+++++.+.+..    ...|-.+.+ ...       ...++|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~----~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAAD-GHKVAVTHRGSGAPKGLFG----VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCTTSEE----EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCcchhcCceE----EEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            6899999999999999998888877 9999999987665432211    112222211 111       12479999998


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      +|
T Consensus        81 AG   82 (237)
T d1uzma1          81 AG   82 (237)
T ss_dssp             CS
T ss_pred             ec
Confidence            87

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.52  E-value=0.0081  Score=48.60  Aligned_cols=68  Identities=12%  Similarity=-0.012  Sum_probs=47.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC----CCEEEeCCCCChhhh-------ccCccEEEeC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG----ADKVIDYRKTKYEDI-------EEKFDVLYDT  219 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~-------~~~~d~v~d~  219 (327)
                      +.||+||++++|++++..+... |+++++..++.++.+.++..+    ...+  .+..+....       ..++|+++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv--~~~~~~~~~~~~~~~~~G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEAFAETYPQLKP--MSEQEPAELIEAVTSAYGQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHHHHCTTSEE--CCCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhhhCcEEEecc--CCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            6899999999999988777777 999998888888776665433    2112  222332221       2579999987


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      .|
T Consensus        79 Ag   80 (252)
T d1zmta1          79 DI   80 (252)
T ss_dssp             CC
T ss_pred             Cc
Confidence            65

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.44  E-value=0.052  Score=40.34  Aligned_cols=82  Identities=13%  Similarity=0.088  Sum_probs=57.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC-CEEEeCCCCChhhhccCccEEEeCCCC--c----
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA-DKVIDYRKTKYEDIEEKFDVLYDTIGD--C----  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~d~v~d~~g~--~----  223 (327)
                      +|.|.| +|.+|...+..++.. |.++++.++++++.+.+++.|. +...+.     .+.....|++|-++..  .    
T Consensus         2 kI~iIG-~G~mG~~lA~~l~~~-g~~V~~~d~~~~~~~~a~~~~~~~~~~~~-----~~~~~~~DiIilavp~~~~~~vl   74 (165)
T d2f1ka2           2 KIGVVG-LGLIGASLAGDLRRR-GHYLIGVSRQQSTCEKAVERQLVDEAGQD-----LSLLQTAKIIFLCTPIQLILPTL   74 (165)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTSCSEEESC-----GGGGTTCSEEEECSCHHHHHHHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHhhccceeeee-----cccccccccccccCcHhhhhhhh
Confidence            588998 899999888777777 9999998899888888888884 433221     2345689999988752  1    


Q ss_pred             hhhhhhhcCCCcEEEe
Q 020320          224 KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 ~~~~~~l~~~g~~v~~  239 (327)
                      +.....++++..++..
T Consensus        75 ~~l~~~l~~~~iv~~~   90 (165)
T d2f1ka2          75 EKLIPHLSPTAIVTDV   90 (165)
T ss_dssp             HHHGGGSCTTCEEEEC
T ss_pred             hhhhhhcccccceeec
Confidence            3333444555555444

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=95.44  E-value=0.011  Score=47.06  Aligned_cols=90  Identities=16%  Similarity=0.212  Sum_probs=64.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC----
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG----  221 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g----  221 (327)
                      ..++.+||=.| || .|..+..+++ . |.+++.++.++...+.+++-+....+..+..++......+|+|+....    
T Consensus        40 ~~~~~~vLDiG-cG-~G~~~~~l~~-~-~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~~~~~~fD~ii~~~~~~~~  115 (246)
T d2avna1          40 LKNPCRVLDLG-GG-TGKWSLFLQE-R-GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSY  115 (246)
T ss_dssp             CCSCCEEEEET-CT-TCHHHHHHHT-T-TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHH
T ss_pred             cCCCCEEEEEC-CC-Cchhcccccc-c-ceEEEEeecccccccccccccccccccccccccccccccccceeeecchhhh
Confidence            45778888887 77 6888888887 4 889999999999999998877665655444443222356898886543    


Q ss_pred             --Cc----hhhhhhhcCCCcEEEe
Q 020320          222 --DC----KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       222 --~~----~~~~~~l~~~g~~v~~  239 (327)
                        ..    ....++|+|||.++..
T Consensus       116 ~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         116 VENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhHHHHHHHHHhhcCcCcEEEEE
Confidence              11    3456789999988654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.37  E-value=0.058  Score=38.49  Aligned_cols=69  Identities=25%  Similarity=0.238  Sum_probs=51.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCCChh--hh--ccCccEEEeCCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKTKYE--DI--EEKFDVLYDTIGD  222 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~--~~--~~~~d~v~d~~g~  222 (327)
                      +|+|.| .|.+|...++.+... |..+++++.++++.+.+. +++.. ++..+..+..  ..  ++.+|.++.+++.
T Consensus         2 ~IvI~G-~G~~G~~la~~L~~~-g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~   75 (132)
T d1lssa_           2 YIIIAG-IGRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEIDAL-VINGDCTKIKTLEDAGIEDADMYIAVTGK   75 (132)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred             EEEEEC-CCHHHHHHHHHHHHC-CCCcceecCChhhhhhhhhhhhhh-hccCcccchhhhhhcChhhhhhhcccCCc
Confidence            689999 799999999999888 999999999999887775 45654 4443333322  22  3578999988775

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.25  E-value=0.012  Score=46.48  Aligned_cols=69  Identities=20%  Similarity=0.134  Sum_probs=44.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCc--EEEEeCCcccHHHHHHcCCCEEEeCCCC---ChhhhccCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGAS--HVVATTSTPKVEFVKELGADKVIDYRKT---KYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~--~v~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~d~v~d~~g  221 (327)
                      .+|||+||+|.+|..++..+... |.+  ++...+++++..... -+.+.+. .+-.   .+....+++|.++.+++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~-g~~v~v~~~~R~~~~~~~~~-~~~~~~~-~d~~~~~~~~~~~~~~d~vi~~a~   77 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEG-SDKFVAKGLVRSAQGKEKIG-GEADVFI-GDITDADSINPAFQGIDALVILTS   77 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHT-TTTCEEEEEESCHHHHHHTT-CCTTEEE-CCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHC-CCcEEEEEEcCCHHHHHhcc-CCcEEEE-eeeccccccccccccceeeEEEEe
Confidence            58999999999999999888877 654  444556665544321 1233322 2222   22334578999998876

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.14  E-value=0.023  Score=45.84  Aligned_cols=89  Identities=15%  Similarity=0.198  Sum_probs=59.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCE-EEeCCCCChhhh--ccCccEEE
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADK-VIDYRKTKYEDI--EEKFDVLY  217 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~--~~~~d~v~  217 (327)
                      ..++|++||=.| ||. |..++.+++ + |.+++.++.++...+.+++    .+... ++..   +....  ...+|+++
T Consensus       117 ~~~~g~~VLDiG-cGs-G~l~i~aa~-~-g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~---d~~~~~~~~~fD~V~  189 (254)
T d2nxca1         117 HLRPGDKVLDLG-TGS-GVLAIAAEK-L-GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG---SLEAALPFGPFDLLV  189 (254)
T ss_dssp             HCCTTCEEEEET-CTT-SHHHHHHHH-T-TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES---CHHHHGGGCCEEEEE
T ss_pred             hcCccCEEEEcc-cch-hHHHHHHHh-c-CCEEEEEECChHHHHHHHHHHHHcCCceeEEec---cccccccccccchhh
Confidence            357899999998 775 767776665 5 8899998899998877753    44332 2222   12222  24699998


Q ss_pred             eCCC-C-----chhhhhhhcCCCcEEEee
Q 020320          218 DTIG-D-----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       218 d~~g-~-----~~~~~~~l~~~g~~v~~g  240 (327)
                      .... .     .....+.|+|+|+++..|
T Consensus       190 ani~~~~l~~l~~~~~~~LkpGG~lilSg  218 (254)
T d2nxca1         190 ANLYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             EECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence            6543 1     145668899999998754

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.11  E-value=0.034  Score=42.27  Aligned_cols=99  Identities=16%  Similarity=0.267  Sum_probs=58.6

Q ss_pred             HHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEE-EEeCCcccHHHH----HHcC--C-CE--EEeCCC-CChh
Q 020320          140 GFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV-VATTSTPKVEFV----KELG--A-DK--VIDYRK-TKYE  207 (327)
Q Consensus       140 ~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v-~~~~~~~~~~~~----~~~g--~-~~--v~~~~~-~~~~  207 (327)
                      +++..+. -.+++|+|+| +|+.+.+++..+... |.+.+ ++.+++++.+.+    ++++  . ..  +.+..+ ..+.
T Consensus         8 ~l~~~~~~l~~k~vlIlG-aGGaarai~~al~~~-g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   85 (182)
T d1vi2a1           8 AIKESGFDIKGKTMVLLG-AGGASTAIGAQGAIE-GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA   85 (182)
T ss_dssp             HHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             HHHHcCCCcCCCEEEEEC-CcHHHHHHHHHHhhc-CCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchh
Confidence            4544333 3678999999 899999998888888 76544 555776655433    3332  1 11  122221 2233


Q ss_pred             hhccCccEEEeCCC-Cc----h----hhhhhhcCCCcEEEee
Q 020320          208 DIEEKFDVLYDTIG-DC----K----NSFVVAKDNAPIVDIT  240 (327)
Q Consensus       208 ~~~~~~d~v~d~~g-~~----~----~~~~~l~~~g~~v~~g  240 (327)
                      .....+|++++|+. +.    .    .-...++++..++.+-
T Consensus        86 ~~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~  127 (182)
T d1vi2a1          86 EALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV  127 (182)
T ss_dssp             HHHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred             hhhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence            34568999999975 11    1    1234566666666664

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.016  Score=45.94  Aligned_cols=74  Identities=15%  Similarity=0.294  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHHHcCCCEEE-eCC-CCChhhhccCccEEEeCCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVKELGADKVI-DYR-KTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~~~g~~~v~-~~~-~~~~~~~~~~~d~v~d~~g~  222 (327)
                      .+++|||+||+|-+|...++.+... |.  ++++..+++.+...-..-.....+ |.. .+++.....++|.++.++|.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~-g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~   90 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   90 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC-CCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccc
Confidence            3468999999999999988888777 53  677777755432211111122222 221 12344455789999999884

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.00  E-value=0.027  Score=45.12  Aligned_cols=42  Identities=12%  Similarity=0.164  Sum_probs=32.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHh--hcCCcEEEEeCCcccHHHHH
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKH--FYGASHVVATTSTPKVEFVK  191 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~--~~g~~~v~~~~~~~~~~~~~  191 (327)
                      ++|||+||++++|.++++.+..  ..|+++++..+++++.+.++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~   46 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE   46 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            5799999999999998765432  22788999999888765554

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=94.81  E-value=0.0094  Score=45.16  Aligned_cols=90  Identities=14%  Similarity=0.216  Sum_probs=56.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcC---CCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELG---ADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g---~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      ..++++|+|+| +|+.+.+++..+... +.++.++-|+.++.+.+ +.++   .-..+..+.    .....+|++++|+.
T Consensus        15 ~~~~k~vlIlG-aGGaarai~~aL~~~-~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~----~~~~~~diiIN~tp   88 (171)
T d1p77a1          15 LRPNQHVLILG-AGGATKGVLLPLLQA-QQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS----IPLQTYDLVINATS   88 (171)
T ss_dssp             CCTTCEEEEEC-CSHHHHTTHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG----CCCSCCSEEEECCC
T ss_pred             CCCCCEEEEEC-CcHHHHHHHHHHccc-CceeeeccchHHHHHHHHHHHhhccccchhhhcc----ccccccceeeeccc
Confidence            45788999999 899999988887765 77777777888775544 4443   111222111    12357899999986


Q ss_pred             Cc------hhhhhhhcCCCcEEEeeC
Q 020320          222 DC------KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       222 ~~------~~~~~~l~~~g~~v~~g~  241 (327)
                      ..      ......++++..++.+-.
T Consensus        89 ~g~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          89 AGLSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             C-------CCCHHHHHHCSCEEESCC
T ss_pred             ccccccccchhhhhhcccceeeeeec
Confidence            21      122344555666665543

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=94.71  E-value=0.026  Score=44.47  Aligned_cols=96  Identities=15%  Similarity=0.234  Sum_probs=63.6

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEE--EeCCCCChhhhccCcc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKV--IDYRKTKYEDIEEKFD  214 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~~~~~~d  214 (327)
                      ++.++++++++||=+| || .|..+..+++.  +.+++.++.+++..+.+++    .+.+.+  +..+..++......+|
T Consensus         8 l~~~~l~~~~rVLDiG-cG-~G~~~~~l~~~--~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~~~~~fD   83 (231)
T d1vl5a_           8 MQIAALKGNEEVLDVA-TG-GGHVANAFAPF--VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFH   83 (231)
T ss_dssp             HHHHTCCSCCEEEEET-CT-TCHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEE
T ss_pred             HHhcCCCCcCEEEEec-cc-CcHHHHHHHHh--CCEEEEEECCHHHHhhhhhcccccccccccccccccccccccccccc
Confidence            4678999999999999 66 67777777764  7788888888887766643    454332  2222222211124588


Q ss_pred             EEEeCCC-----Cc----hhhhhhhcCCCcEEEee
Q 020320          215 VLYDTIG-----DC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       215 ~v~d~~g-----~~----~~~~~~l~~~g~~v~~g  240 (327)
                      +|+..-.     ..    ....++|+|||+++...
T Consensus        84 ~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          84 IVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            8885432     11    45678999999988754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.64  E-value=0.25  Score=36.69  Aligned_cols=95  Identities=20%  Similarity=0.196  Sum_probs=65.5

Q ss_pred             cccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh
Q 020320          128 ASLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY  206 (327)
Q Consensus       128 a~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (327)
                      +++|++....+..++..++ -.|++++|.|.+..+|.-.+.++... |+.+.+.....                   .+.
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~-gatVt~~~~~t-------------------~~l   76 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-NATVTTCHSKT-------------------AHL   76 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTC-------------------SSH
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhc-cCceEEEeccc-------------------ccH
Confidence            4556666566666665543 47999999998899999988888887 88776544322                   222


Q ss_pred             hhhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCC
Q 020320          207 EDIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWP  242 (327)
Q Consensus       207 ~~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~  242 (327)
                      .+..+.+|+++-++|..+. .-..++++-.++..|..
T Consensus        77 ~~~~~~aDivi~a~G~~~~i~~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          77 DEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             HHHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCB
T ss_pred             HHHHhhccchhhccccccccccccccCCCeEeccCcc
Confidence            3344567888888886532 33567788888888754

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.59  E-value=0.039  Score=42.58  Aligned_cols=103  Identities=22%  Similarity=0.328  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC-----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD-----  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~-----  222 (327)
                      .|++|.|+| .|.+|..++++++.+ |.++++.+.......  ...+.      ...++.+.+...|+++-++..     
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~f-g~~V~~~d~~~~~~~--~~~~~------~~~~l~~~l~~sDii~~~~plt~~T~  111 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGF-GAKVITYDIFRNPEL--EKKGY------YVDSLDDLYKQADVISLHVPDVPANV  111 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCHHH--HHTTC------BCSCHHHHHHHCSEEEECSCCCGGGT
T ss_pred             cCCeEEEec-ccccchhHHHhHhhh-cccccccCccccccc--cccee------eeccccccccccccccccCCcccccc
Confidence            488999999 999999999999998 999998876543322  12221      112345556678999877652     


Q ss_pred             --c-hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          223 --C-KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       223 --~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                        + ...+..|+++..++..+-...          ++   -+.+++.+.+|++.
T Consensus       112 ~li~~~~l~~mk~~a~lIN~sRG~i----------vd---e~aL~~aL~~~~i~  152 (197)
T d1j4aa1         112 HMINDESIAKMKQDVVIVNVSRGPL----------VD---TDAVIRGLDSGKIF  152 (197)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSCGGG----------BC---HHHHHHHHHHTSEE
T ss_pred             ccccHHHHhhhCCccEEEecCchhh----------hh---hHHHHHHHhcccch
Confidence              1 456788888888887753221          12   24567788888875

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.58  E-value=0.046  Score=41.54  Aligned_cols=94  Identities=13%  Similarity=-0.002  Sum_probs=60.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC-CC-E----------------EEeCCC
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG-AD-K----------------VIDYRK  203 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g-~~-~----------------v~~~~~  203 (327)
                      ....+.+|.+||..| ||. |..+..+|+ . |.++++++-|+...+.+++.. .. .                .+..+-
T Consensus        14 ~~l~~~~~~rvLd~G-CG~-G~~a~~la~-~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          14 SSLNVVPGARVLVPL-CGK-SQDMSWLSG-Q-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHCCCTTCEEEETT-TCC-SHHHHHHHH-H-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHcCCCCCCEEEEec-CcC-CHHHHHHHH-c-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            456788999999999 665 567778887 4 999999999999988886531 11 0                111111


Q ss_pred             CChh-hhccCccEEEeCCC--Cc---------hhhhhhhcCCCcEEEe
Q 020320          204 TKYE-DIEEKFDVLYDTIG--DC---------KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       204 ~~~~-~~~~~~d~v~d~~g--~~---------~~~~~~l~~~g~~v~~  239 (327)
                      .... .....+|.+++...  ..         ..+.+.|+++|.++..
T Consensus        90 ~~l~~~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~  137 (201)
T d1pjza_          90 FALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  137 (201)
T ss_dssp             SSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             cccccccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEE
Confidence            1111 11235788887543  11         3456789999987654

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.51  E-value=0.052  Score=42.72  Aligned_cols=98  Identities=14%  Similarity=0.124  Sum_probs=57.1

Q ss_pred             HHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHhhc--C----CcEEEEeCCcccHHHHHH---------cCCCEEE--e
Q 020320          140 GFKT--AGFKTGQTIFIVGGAGGVGTLVIQLAKHFY--G----ASHVVATTSTPKVEFVKE---------LGADKVI--D  200 (327)
Q Consensus       140 ~l~~--~~~~~~~~vlI~ga~g~~G~~a~~la~~~~--g----~~~v~~~~~~~~~~~~~~---------~g~~~v~--~  200 (327)
                      .++.  ..++++++||..|..  .|..++.+++..+  |    .+++.+...++-.+.+++         .+...+.  .
T Consensus        70 ~l~~L~~~l~~g~~VLeIGtG--sGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~  147 (223)
T d1r18a_          70 ALEYLRDHLKPGARILDVGSG--SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE  147 (223)
T ss_dssp             HHHHTTTTCCTTCEEEEESCT--TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             HHHHHhhccCCCCeEEEecCC--CCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe
Confidence            4444  378999999999943  3444444444431  3    367777777765554422         2222332  2


Q ss_pred             CCCCChhhhccCccEEEeCCC--C-chhhhhhhcCCCcEEEe
Q 020320          201 YRKTKYEDIEEKFDVLYDTIG--D-CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       201 ~~~~~~~~~~~~~d~v~d~~g--~-~~~~~~~l~~~g~~v~~  239 (327)
                      .+..........+|.++-+.+  . +...+..|++||+++..
T Consensus       148 ~d~~~~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         148 GDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             SCGGGCCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cccccccccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            221111122346899886654  2 36677899999999875

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.47  E-value=0.11  Score=39.03  Aligned_cols=92  Identities=20%  Similarity=0.131  Sum_probs=58.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-C-CcccHHHHHHcCCCEEEeCCC-------------CChhhhccCccE
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-T-STPKVEFVKELGADKVIDYRK-------------TKYEDIEEKFDV  215 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~-~~~~~~~~~~~g~~~v~~~~~-------------~~~~~~~~~~d~  215 (327)
                      +|.|.| .|.+|......+......+++.+- . .......+.+.+.+......+             ..+.....++|+
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDv   82 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI   82 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCE
Confidence            688999 999999888887665345555444 2 333455666776554321111             011112247999


Q ss_pred             EEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          216 LYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       216 v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      |+||+|..   ..+-..+..|-+.+..+.+.
T Consensus        83 ViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          83 IVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             EEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             EEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            99999965   44556778888888887654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.44  E-value=0.13  Score=39.11  Aligned_cols=106  Identities=20%  Similarity=0.153  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .+.++.|+| .|.+|...+..++.+ |.+++..++...........+....     .+..+.....|+++-+....    
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~~~~~~~~-----~~l~~~l~~sD~v~~~~plt~~T~  115 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPF-DVHLHYTDRHRLPESVEKELNLTWH-----ATREDMYPVCDVVTLNCPLHPETE  115 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-TCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHGGGCSEEEECSCCCTTTT
T ss_pred             cccceeecc-ccccchhhhhhhhcc-CceEEEEeecccccccccccccccc-----CCHHHHHHhccchhhcccccccch
Confidence            578999999 999999999999998 9999999877666665555553221     23445567789998766521    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..|+++..++.++-...          ++   -+.+++.+++|++.
T Consensus       116 ~li~~~~l~~mk~ga~lIN~aRG~i----------vd---~~aL~~aL~~g~i~  156 (188)
T d2naca1         116 HMINDETLKLFKRGAYIVNTARGKL----------CD---RDAVARALESGRLA  156 (188)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSCGGG----------BC---HHHHHHHHHTTSEE
T ss_pred             hhhHHHHHHhCCCCCEEEecCchhh----------hh---HHHHHHHHhCCCce
Confidence                456778888887777753221          22   24567888888886

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=94.42  E-value=0.068  Score=42.54  Aligned_cols=70  Identities=19%  Similarity=0.258  Sum_probs=45.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCc-------EEEEeCCcccHHHHH----HcCCCEE-EeCCCCChhh----------
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGAS-------HVVATTSTPKVEFVK----ELGADKV-IDYRKTKYED----------  208 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~-------~v~~~~~~~~~~~~~----~~g~~~v-~~~~~~~~~~----------  208 (327)
                      .+||+||++++|.+.+..+... |++       ++...+++++.+.+.    +.|.... +.-+-.+..+          
T Consensus         3 VvlITGas~GIG~aia~~la~~-G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHh-CccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3699999999999988777666 887       667778877665442    2343221 2111122211          


Q ss_pred             hccCccEEEeCCC
Q 020320          209 IEEKFDVLYDTIG  221 (327)
Q Consensus       209 ~~~~~d~v~d~~g  221 (327)
                      ...++|+++++.|
T Consensus        82 ~~g~iDilvnnAg   94 (240)
T d2bd0a1          82 RYGHIDCLVNNAG   94 (240)
T ss_dssp             HTSCCSEEEECCC
T ss_pred             HcCCcceeecccc
Confidence            1247999999988

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.38  E-value=0.28  Score=33.66  Aligned_cols=88  Identities=15%  Similarity=0.115  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc--ccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST--PKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~--~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      .|++|+|.| .|.+|..-+..+... |++++++....  +...++++-.... +. .... ...+.++++++.+.+..  
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~-ga~v~v~~~~~~~~~~~~~~~~~i~~-~~-~~~~-~~dl~~~~lv~~at~d~~~   85 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEA-GARLTVNALTFIPQFTVWANEGMLTL-VE-GPFD-ETLLDSCWLAIAATDDDTV   85 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHT-TBEEEEEESSCCHHHHHHHTTTSCEE-EE-SSCC-GGGGTTCSEEEECCSCHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEeccCChHHHHHHhcCCcee-ec-cCCC-HHHhCCCcEEeecCCCHHH
Confidence            478999999 899999999998887 99888777432  2333333322222 21 1111 22356789999888754  


Q ss_pred             -hhhhhhhcCCCcEEEee
Q 020320          224 -KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 -~~~~~~l~~~g~~v~~g  240 (327)
                       .......++.|..+...
T Consensus        86 n~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          86 NQRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             HHHHHHHHHHTTCEEEET
T ss_pred             HHHHHHHHHHcCCEEEeC
Confidence             34556677778777654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.32  E-value=0.029  Score=44.65  Aligned_cols=37  Identities=14%  Similarity=0.227  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .|++|||+||++++|.+.++.+... |++++.+..++.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~-G~~V~~~~~~~~   37 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRAR-NWWVASIDVVEN   37 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence            4799999999999999999999888 999988876544

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=94.30  E-value=0.027  Score=45.44  Aligned_cols=38  Identities=29%  Similarity=0.550  Sum_probs=30.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCC
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTS  183 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~  183 (327)
                      .++|+.++||+||++++|++.+..+... |++ ++++.++
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~-Ga~~vvl~~R~   43 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARR-GAPHLLLVSRS   43 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHH-TCSEEEEEESS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence            5789999999999999999988777777 876 4444454

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.25  E-value=0.1  Score=39.91  Aligned_cols=105  Identities=16%  Similarity=0.126  Sum_probs=72.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC------
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD------  222 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~------  222 (327)
                      |.++.|+| .|.+|...+++++.+ |.+++..+............+...     ..++.+.+...|+++-+...      
T Consensus        47 g~tvgIiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~~~~~~~-----~~~l~~ll~~sD~v~l~~plt~~T~~  119 (191)
T d1gdha1          47 NKTLGIYG-FGSIGQALAKRAQGF-DMDIDYFDTHRASSSDEASYQATF-----HDSLDSLLSVSQFFSLNAPSTPETRY  119 (191)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSCCCHHHHHHHTCEE-----CSSHHHHHHHCSEEEECCCCCTTTTT
T ss_pred             ccceEEee-cccchHHHHHHHHhh-ccccccccccccccchhhcccccc-----cCCHHHHHhhCCeEEecCCCCchHhh
Confidence            79999999 999999999999998 999998887655444333333211     12345556678999876642      


Q ss_pred             -c-hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          223 -C-KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       223 -~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                       + ...+..|+++..++..+-...          ++   -+.+++.+++|++.
T Consensus       120 li~~~~l~~mk~~a~lIN~sRG~i----------vd---e~aL~~aL~~g~i~  159 (191)
T d1gdha1         120 FFNKATIKSLPQGAIVVNTARGDL----------VD---NELVVAALEAGRLA  159 (191)
T ss_dssp             CBSHHHHTTSCTTEEEEECSCGGG----------BC---HHHHHHHHHHTSEE
T ss_pred             eecHHHhhCcCCccEEEecCCccc----------hh---hHHHHHHHHcCCce
Confidence             1 456778888888887753221          12   24567888888886

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.19  E-value=0.03  Score=37.43  Aligned_cols=68  Identities=16%  Similarity=0.254  Sum_probs=45.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc--cHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP--KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      .|++|+|+| .|..|+++++++... |+++++.+.++.  ..+.+++ +....+....   .....++|.++-+-|
T Consensus         4 ~~K~v~ViG-lG~sG~s~a~~L~~~-g~~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~d~vi~SPG   73 (93)
T d2jfga1           4 QGKNVVIIG-LGLTGLSCVDFFLAR-GVTPRVMDTRMTPPGLDKLPE-AVERHTGSLN---DEWLMAADLIVASPG   73 (93)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHHT-TCCCEEEESSSSCTTGGGSCT-TSCEEESBCC---HHHHHHCSEEEECTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHC-CCEEEEeeCCcCchhHHHHhh-ccceeecccc---hhhhccCCEEEECCC
Confidence            478899999 899999999999998 999999996433  2222222 2222222211   223457899998777

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=94.17  E-value=0.11  Score=38.61  Aligned_cols=89  Identities=12%  Similarity=0.141  Sum_probs=55.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEEeCCCCCh---hhhccCccEEEeCCCCc-
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVIDYRKTKY---EDIEEKFDVLYDTIGDC-  223 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~---~~~~~~~d~v~d~~g~~-  223 (327)
                      +++|+|+| +|.+|..+++.+... |.+++++.++.++...+.+ ++...+........   ...+...|.++.+.... 
T Consensus         2 ~K~IliiG-aG~~G~~~a~~L~~~-g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~   79 (182)
T d1e5qa1           2 TKSVLMLG-SGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF   79 (182)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTT-TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGG
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchh
Confidence            68999999 799999988888877 8899999999888776654 44322222222221   12235678888776532 


Q ss_pred             --hhhhhhhcCCCcEEEe
Q 020320          224 --KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 --~~~~~~l~~~g~~v~~  239 (327)
                        .....+.+.+..++..
T Consensus        80 ~~~~~~~~~~~~~~~~~~   97 (182)
T d1e5qa1          80 HATVIKSAIRQKKHVVTT   97 (182)
T ss_dssp             HHHHHHHHHHHTCEEECS
T ss_pred             hhHHHHHHHhhccceeec
Confidence              2233444444444443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.14  E-value=0.25  Score=36.55  Aligned_cols=94  Identities=16%  Similarity=0.113  Sum_probs=64.1

Q ss_pred             ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320          129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE  207 (327)
Q Consensus       129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (327)
                      .+|++....+..++..+ .-.|++++|.|.+..+|.-...++... |+++.+.-...                   .+..
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~-gatVt~~h~~t-------------------~~l~   75 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-GCTTTVTHRFT-------------------KNLR   75 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-TCEEEEECSSC-------------------SCHH
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHh-hcccccccccc-------------------chhH
Confidence            45666555555666544 346999999999899999998888887 88765443222                   2233


Q ss_pred             hhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCC
Q 020320          208 DIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWP  242 (327)
Q Consensus       208 ~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~  242 (327)
                      ...+.+|+++-++|..+. .-..++++..++..|..
T Consensus        76 ~~~~~ADivI~a~G~p~~i~~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          76 HHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             HHHHHCSEEEECSCCTTCBCTTTSCTTCEEEECCCE
T ss_pred             HHHhhhhHhhhhccCcccccccccCCCcEEEecCce
Confidence            334567888988886532 23566788888888764

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.12  E-value=0.037  Score=46.52  Aligned_cols=76  Identities=13%  Similarity=0.204  Sum_probs=51.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC-----CC--EEE--eC-CCCChhhhccCcc
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG-----AD--KVI--DY-RKTKYEDIEEKFD  214 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g-----~~--~v~--~~-~~~~~~~~~~~~d  214 (327)
                      -+.+|++|||+||+|-+|...+..+... |.++++++++..+...+++..     ..  ..+  |- +...+.....++|
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~-G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   85 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA   85 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccch
Confidence            3567999999999999999988877777 999999898877655543311     11  112  11 2223344556889


Q ss_pred             EEEeCCC
Q 020320          215 VLYDTIG  221 (327)
Q Consensus       215 ~v~d~~g  221 (327)
                      .++.+.+
T Consensus        86 ~v~~~a~   92 (342)
T d1y1pa1          86 GVAHIAS   92 (342)
T ss_dssp             EEEECCC
T ss_pred             hhhhhcc
Confidence            9987765

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.10  E-value=0.081  Score=42.42  Aligned_cols=36  Identities=22%  Similarity=0.251  Sum_probs=30.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      ...||+||++++|.+.+..+... |+++++..++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~-G~~Vvi~~r~~~~   37 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEG   37 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCchH
Confidence            35799999999999988888877 9999999977554

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.08  E-value=0.087  Score=40.36  Aligned_cols=105  Identities=22%  Similarity=0.266  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|+++.|+| .|.+|...+++++.+ |.++++.++..... .....+...+     .++.+.+...|+++-+....    
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~-~~~~~~~~~~-----~~l~~ll~~sD~i~~~~plt~~T~  119 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAF-GFNVLFYDPYLSDG-VERALGLQRV-----STLQDLLFHSDCVTLHCGLNEHNH  119 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECTTSCTT-HHHHHTCEEC-----SSHHHHHHHCSEEEECCCCCTTCT
T ss_pred             eCceEEEec-cccccccceeeeecc-ccceeeccCccccc-chhhhccccc-----cchhhccccCCEEEEeecccccch
Confidence            578999999 999999999999998 99999988654432 2223333211     23445556788888766411    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                          ...+..|+++..++..+-...          ++   -+.+++.+++|++.
T Consensus       120 ~li~~~~l~~mk~~a~lIN~sRG~i----------vd---e~aL~~aL~~~~i~  160 (193)
T d1mx3a1         120 HLINDFTVKQMRQGAFLVNTARGGL----------VD---EKALAQALKEGRIR  160 (193)
T ss_dssp             TSBSHHHHTTSCTTEEEEECSCTTS----------BC---HHHHHHHHHHTSEE
T ss_pred             hhhhHHHHhccCCCCeEEecCCceE----------Ec---HHHHHHHHHcCCce
Confidence                456678888888888764331          12   24567788888875

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=94.05  E-value=0.082  Score=42.98  Aligned_cols=96  Identities=17%  Similarity=0.121  Sum_probs=63.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC-E--EEeCCCCChhhhccCcc
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD-K--VIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~-~--v~~~~~~~~~~~~~~~d  214 (327)
                      ....+.++.+||=+| || .|..+..+++.. +++++.++.++...+.+++    .|.. .  ++..+..++......+|
T Consensus        61 ~~~~l~~~~~vLDiG-cG-~G~~~~~la~~~-~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD  137 (282)
T d2o57a1          61 MTGVLQRQAKGLDLG-AG-YGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYD  137 (282)
T ss_dssp             HTTCCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEE
T ss_pred             HhcCCCCCCEEEEeC-CC-CcHHHhhhhccC-CcEEEEEeccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            357889999999998 66 466777888876 8899999989887766654    3432 1  22222222221224588


Q ss_pred             EEEeCCC-----Cc----hhhhhhhcCCCcEEEee
Q 020320          215 VLYDTIG-----DC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       215 ~v~d~~g-----~~----~~~~~~l~~~g~~v~~g  240 (327)
                      +|+..-.     ..    ..+.++|+|+|+++...
T Consensus       138 ~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         138 FIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence            8874322     11    45668999999988764

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.99  E-value=0.13  Score=42.87  Aligned_cols=98  Identities=16%  Similarity=0.220  Sum_probs=62.3

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHHH----cC-----------CCEE--E
Q 020320          139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVKE----LG-----------ADKV--I  199 (327)
Q Consensus       139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~~----~g-----------~~~v--~  199 (327)
                      +.+...+++||++||=.| +|. |.++..+|+.. |.  +++....+++..+.+++    ++           .+.+  .
T Consensus        89 ~Il~~l~i~pG~rVLE~G-tGs-G~lt~~LAr~v-g~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~  165 (324)
T d2b25a1          89 MILSMMDINPGDTVLEAG-SGS-GGMSLFLSKAV-GSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI  165 (324)
T ss_dssp             HHHHHHTCCTTCEEEEEC-CTT-SHHHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred             HHHHHhCCCCCCEEEEec-ccc-cHHHHHHHHHh-CCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEE
Confidence            345678999999999888 554 88889999988 53  68888888887777643    11           1222  1


Q ss_pred             eCCCCChhh--hccCccEEE-eCCC---CchhhhhhhcCCCcEEEe
Q 020320          200 DYRKTKYED--IEEKFDVLY-DTIG---DCKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       200 ~~~~~~~~~--~~~~~d~v~-d~~g---~~~~~~~~l~~~g~~v~~  239 (327)
                      ..+-.+...  ....+|.|| |.-.   .+..+.+.|+|||+++.+
T Consensus       166 ~~di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~  211 (324)
T d2b25a1         166 HKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVY  211 (324)
T ss_dssp             ESCTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEE
T ss_pred             ecchhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEE
Confidence            111111111  113478777 4432   236788999999999877

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.90  E-value=0.12  Score=39.18  Aligned_cols=100  Identities=11%  Similarity=0.143  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC-----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD-----  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~-----  222 (327)
                      .|+++.|+| .|.+|...+++++.+ |.++++..+++...       ....    ..++.+.+...|+++-++..     
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~-g~~v~~~d~~~~~~-------~~~~----~~~l~ell~~sDiv~~~~pl~~~t~  107 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAAL-GAQVRGFSRTPKEG-------PWRF----TNSLEEALREARAAVCALPLNKHTR  107 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHT-TCEEEEECSSCCCS-------SSCC----BSCSHHHHTTCSEEEECCCCSTTTT
T ss_pred             cCceEEEec-cccccccceeeeecc-cccccccccccccc-------ceee----eechhhhhhccchhhcccccccccc
Confidence            588999999 999999999999998 99999888764321       1111    12345566789999987652     


Q ss_pred             --c-hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          223 --C-KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       223 --~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                        + ...+..|+++..++..+-...          ++   -+.+++.+.++++.
T Consensus       108 ~li~~~~l~~mk~~ailIN~~RG~i----------vd---~~aL~~aL~~~~i~  148 (181)
T d1qp8a1         108 GLVKYQHLALMAEDAVFVNVGRAEV----------LD---RDGVLRILKERPQF  148 (181)
T ss_dssp             TCBCHHHHTTSCTTCEEEECSCGGG----------BC---HHHHHHHHHHCTTC
T ss_pred             cccccceeeeccccceEEecccccc----------cc---chhhhhhcccCcEE
Confidence              1 456788899888888763221          22   23556777777765

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.86  E-value=0.083  Score=42.64  Aligned_cols=97  Identities=12%  Similarity=0.106  Sum_probs=63.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----c-C--CCEEEeCCCCChhhh--
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----L-G--ADKVIDYRKTKYEDI--  209 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~-g--~~~v~~~~~~~~~~~--  209 (327)
                      .+...+++||++||=.| || .|.++..+|+..+ ..+++..+.+++..+.+++    + +  .+.+-... .+..+.  
T Consensus        88 Ii~~l~i~PG~~VLE~G-~G-sG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~-~d~~~~~~  164 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAG-AG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV-SDLADSEL  164 (264)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC-SCGGGCCC
T ss_pred             HHHHhCCCCCCEEEecC-cC-CcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEe-cccccccc
Confidence            45689999999999988 44 4778888999883 2367777788888777754    2 1  23221111 112111  


Q ss_pred             -ccCccEEEeCCCC----chhhhhhhcCCCcEEEe
Q 020320          210 -EEKFDVLYDTIGD----CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       210 -~~~~d~v~d~~g~----~~~~~~~l~~~g~~v~~  239 (327)
                       ...+|.||--+..    +..+.++|+|+|+++.+
T Consensus       165 ~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~  199 (264)
T d1i9ga_         165 PDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVY  199 (264)
T ss_dssp             CTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEE
T ss_pred             cCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEE
Confidence             2358887743443    26678899999998876

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=93.80  E-value=0.048  Score=42.15  Aligned_cols=66  Identities=33%  Similarity=0.438  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-cCccEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-EKFDVLYDTI  220 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-~~~d~v~d~~  220 (327)
                      -.|.+|+|.| .|.+|..+++++... |+++++.+.+.++......+|.+.+ ..     .+.. ...|+++=|.
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~-Gakvvv~d~d~~~~~~~~~~g~~~~-~~-----~~~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEA-GAQLLVADTDTERVAHAVALGHTAV-AL-----EDVLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEEC-CG-----GGGGGCCCSEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEecchHHHHHHHHhhccccc-Cc-----cccccccceeeeccc
Confidence            4789999999 999999999999998 9999988888888888888887543 11     1112 3577777554

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.77  E-value=0.043  Score=43.44  Aligned_cols=37  Identities=24%  Similarity=0.318  Sum_probs=31.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK  186 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~  186 (327)
                      ++++||+||++++|.+.++.+... |++++++.++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~-Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKAR-GYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCccc
Confidence            368899999999999988888878 9999999877654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.76  E-value=0.21  Score=35.66  Aligned_cols=33  Identities=12%  Similarity=0.207  Sum_probs=25.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      +|.|.|++|-+|.+.+.......+.+++.....
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~   33 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDA   33 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            588999999999998888776646677666543

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=93.73  E-value=0.022  Score=45.55  Aligned_cols=95  Identities=20%  Similarity=0.193  Sum_probs=62.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCE---EEeCCCCChhhhccCcc
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADK---VIDYRKTKYEDIEEKFD  214 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~---v~~~~~~~~~~~~~~~d  214 (327)
                      ...+++||++||=+| ||. |..+..+++.. +++++.++.++...+.+++    .|...   .+..+-.+. .....+|
T Consensus        27 ~~~~l~pg~~VLDiG-CG~-G~~~~~la~~~-~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-~~~~~fD  102 (245)
T d1nkva_          27 RVLRMKPGTRILDLG-SGS-GEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VANEKCD  102 (245)
T ss_dssp             HHTCCCTTCEEEEET-CTT-CHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-CCSSCEE
T ss_pred             HHcCCCCCCEEEEEc-CCC-CHHHHHHHHhc-CCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc-cccCcee
Confidence            578999999999888 655 45566788876 8899999999887776644    45322   122222221 1224688


Q ss_pred             EEEeCCC-----Cc----hhhhhhhcCCCcEEEee
Q 020320          215 VLYDTIG-----DC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       215 ~v~d~~g-----~~----~~~~~~l~~~g~~v~~g  240 (327)
                      +|+..-.     ..    ..+.+.|+|||+++...
T Consensus       103 ~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_         103 VAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             EEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             EEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            8874322     11    44668899999988753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.48  E-value=0.14  Score=38.80  Aligned_cols=105  Identities=24%  Similarity=0.305  Sum_probs=73.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC----
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD----  222 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~----  222 (327)
                      -.+.++.|.| .|.+|...+.+++.+ |.++++.++...+.. ..+.+...      .++.+.+...|+++-++..    
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~f-g~~v~~~d~~~~~~~-~~~~~~~~------~~l~ell~~sDiv~~~~Plt~~T  112 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAF-GAYVVAYDPYVSPAR-AAQLGIEL------LSLDDLLARADFISVHLPKTPET  112 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECTTSCHHH-HHHHTCEE------CCHHHHHHHCSEEEECCCCSTTT
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhc-cceEEeecCCCChhH-HhhcCcee------ccHHHHHhhCCEEEEcCCCCchh
Confidence            3578999999 999999999999998 999998886544433 23333321      2345556778999877652    


Q ss_pred             --c--hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          223 --C--KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       223 --~--~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                        .  ...+..|+++..++.++-...          ++   -+.+.+.+.+|++.
T Consensus       113 ~~lin~~~l~~mk~~a~lIN~sRG~i----------Vd---e~aL~~aL~~~~i~  154 (184)
T d1ygya1         113 AGLIDKEALAKTKPGVIIVNAARGGL----------VD---EAALADAITGGHVR  154 (184)
T ss_dssp             TTCBCHHHHTTSCTTEEEEECSCTTS----------BC---HHHHHHHHHTSSEE
T ss_pred             hhhhhHHHHhhhCCCceEEEecchhh----------hh---hHHHHHHHhcCcEe
Confidence              1  456788899888888764331          22   24567888999886

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.40  E-value=0.23  Score=36.74  Aligned_cols=85  Identities=15%  Similarity=0.125  Sum_probs=56.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcC--CcEEEEeCCcccHHHHHHcCC-CEEEeCCCCChhhhccCccEEEeCCCC--c--
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYG--ASHVVATTSTPKVEFVKELGA-DKVIDYRKTKYEDIEEKFDVLYDTIGD--C--  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g--~~~v~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~d~v~d~~g~--~--  223 (327)
                      +|+|.| +|.+|...+..++.. |  .++++.+++++..+.+++.+. +...... .  .......|+++-|+..  .  
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~-g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~-~--~~~~~~~dlIila~p~~~~~~   77 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDLGIIDEGTTSI-A--KVEDFSPDFVMLSSPVRTFRE   77 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHTTSCSEEESCG-G--GGGGTCCSEEEECSCHHHHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhc-CCCeEEEEEECChHHHHHHHHhhcchhhhhhh-h--hhhccccccccccCCchhhhh
Confidence            689999 899999888888776 5  367778899999999999884 4443221 1  1122367888887762  1  


Q ss_pred             --hhhhhhhcCCCcEEEee
Q 020320          224 --KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 --~~~~~~l~~~g~~v~~g  240 (327)
                        ......++++..++..+
T Consensus        78 vl~~l~~~~~~~~ii~d~~   96 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQG   96 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECC
T ss_pred             hhhhhhccccccccccccc
Confidence              33344556666655554

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.21  E-value=0.26  Score=36.75  Aligned_cols=92  Identities=15%  Similarity=0.130  Sum_probs=57.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CC-cccHHHHHHcCCCEEEeCCCC-------------ChhhhccCccE
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TS-TPKVEFVKELGADKVIDYRKT-------------KYEDIEEKFDV  215 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~-~~~~~~~~~~g~~~v~~~~~~-------------~~~~~~~~~d~  215 (327)
                      +|.|.| .|.+|..+.+++......+++.+- .+ .....++..++.+......+.             .......++|+
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv   81 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI   81 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence            688998 999999999988766344555443 22 334456666665543221110             11111247999


Q ss_pred             EEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          216 LYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       216 v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      |+||+|..   ..+-..+..+.+++..+.+.
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~  112 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK  112 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             EEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            99999965   44556677777777665443

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.06  E-value=0.045  Score=45.33  Aligned_cols=69  Identities=23%  Similarity=0.267  Sum_probs=43.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHHHHcCC-C--EEEeCCCCChhhhccCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFVKELGA-D--KVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~~~~g~-~--~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      ++|||+||+|-+|...+..+... |.+++++++ +..+.+....+-. .  .+.+.+  .......++|+||.+++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~d~VihlAa   74 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMD-GHEVTVVDNFFTGRKRNVEHWIGHENFELINHD--VVEPLYIEVDQIYHLAS   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECC--TTSCCCCCCSEEEECCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCCcCCHHHHHHhcCCCceEEEehH--HHHHHHcCCCEEEECcc
Confidence            68999999999999988888777 999988874 3333322222211 1  122221  12223347999998875

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.96  E-value=0.046  Score=43.09  Aligned_cols=46  Identities=20%  Similarity=0.065  Sum_probs=38.1

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH
Q 020320          143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE  192 (327)
Q Consensus       143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~  192 (327)
                      ...+.++.+||..| ||. |..+..+|+ . |.+++.++.|+...+.+++
T Consensus        40 ~l~~~~~~rvLd~G-CG~-G~~a~~LA~-~-G~~V~gvD~S~~ai~~a~~   85 (229)
T d2bzga1          40 FLKGKSGLRVFFPL-CGK-AVEMKWFAD-R-GHSVVGVEISELGIQEFFT   85 (229)
T ss_dssp             HHTTCCSCEEEETT-CTT-CTHHHHHHH-T-TCEEEEECSCHHHHHHHHH
T ss_pred             hcCCCCCCEEEEeC-CCC-cHHHHHHHh-C-CCcEEEEeCCHHHHHHHHH
Confidence            35667889999998 887 788888888 4 9999999999988877754

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.73  E-value=0.13  Score=39.80  Aligned_cols=90  Identities=17%  Similarity=0.147  Sum_probs=58.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC-EEEeCCCCChhhhccCccEEEeCC
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD-KVIDYRKTKYEDIEEKFDVLYDTI  220 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~d~v~d~~  220 (327)
                      +.++.+||=+| ||. |..+..+++ . +.++++++.|++..+.+++    .+.. ..+..+..++......+|+|+...
T Consensus        35 l~~~~~ILDiG-cG~-G~~~~~la~-~-~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~~~~~fD~I~~~~  110 (226)
T d1ve3a1          35 MKKRGKVLDLA-CGV-GGFSFLLED-Y-GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFID  110 (226)
T ss_dssp             CCSCCEEEEET-CTT-SHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEES
T ss_pred             cCCCCEEEEEC-CCc-chhhhhHhh-h-hcccccccccccchhhhhhhhccccccccccccccccccccCcCceEEEEec
Confidence            56888999998 666 667788887 4 8899999999888877754    3322 222222222222224688887543


Q ss_pred             C--C---------chhhhhhhcCCCcEEEe
Q 020320          221 G--D---------CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       221 g--~---------~~~~~~~l~~~g~~v~~  239 (327)
                      .  .         +..+.+.|+|||+++..
T Consensus       111 ~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         111 SIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             CGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             chhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            2  1         13456789999998754

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=92.71  E-value=0.073  Score=42.52  Aligned_cols=35  Identities=23%  Similarity=0.275  Sum_probs=29.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      +.|||+||++++|.++++.+... |++++++.++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~-Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAA-GHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECChH
Confidence            45799999999999988888887 999998886543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.59  E-value=0.041  Score=41.59  Aligned_cols=73  Identities=19%  Similarity=0.260  Sum_probs=44.6

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc----CCCEE--EeCCCCChhhhccCccEE
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL----GADKV--IDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~----g~~~v--~~~~~~~~~~~~~~~d~v  216 (327)
                      ..--.+++|+|+| +|+.+.+++..+... + ++.++-++.++.+.+ .++    .....  ++.  .+.......+|++
T Consensus        13 ~~~~~~k~vlIlG-aGG~arai~~aL~~~-~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dli   87 (177)
T d1nvta1          13 IGRVKDKNIVIYG-AGGAARAVAFELAKD-N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF--SGLDVDLDGVDII   87 (177)
T ss_dssp             HCCCCSCEEEEEC-CSHHHHHHHHHHTSS-S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE--ECTTCCCTTCCEE
T ss_pred             CCCcCCCEEEEEC-CcHHHHHHHHHHccc-c-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhh--hhhhhccchhhhh
Confidence            3335778999999 899999888777654 4 666666887765443 222    22110  111  1122233468999


Q ss_pred             EeCCC
Q 020320          217 YDTIG  221 (327)
Q Consensus       217 ~d~~g  221 (327)
                      ++++.
T Consensus        88 In~tp   92 (177)
T d1nvta1          88 INATP   92 (177)
T ss_dssp             EECSC
T ss_pred             ccCCc
Confidence            99875

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.56  E-value=0.24  Score=38.24  Aligned_cols=97  Identities=21%  Similarity=0.216  Sum_probs=60.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEEEeCCCCChhh---hccCcc
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKVIDYRKTKYED---IEEKFD  214 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~---~~~~~d  214 (327)
                      ....++||++||=+| ||+ |..+..+++..+..++++++-+++..+.++    +.+....+..+..+...   ....+|
T Consensus        50 ~~l~lkpg~~VLDlG-cG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd  127 (209)
T d1nt2a_          50 HRLKLRGDERVLYLG-AAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVD  127 (209)
T ss_dssp             CCCCCCSSCEEEEET-CTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEE
T ss_pred             ccCCCCCCCEEEEeC-CcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEE
Confidence            357899999999998 443 457777888773456777888888776653    33322222222221111   124577


Q ss_pred             EEEeCCCC-------chhhhhhhcCCCcEEEee
Q 020320          215 VLYDTIGD-------CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       215 ~v~d~~g~-------~~~~~~~l~~~g~~v~~g  240 (327)
                      +++.....       ...+.+.|+++|.++...
T Consensus       128 ~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         128 LIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             EEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            77765432       144568899999987763

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.38  E-value=0.29  Score=36.74  Aligned_cols=90  Identities=13%  Similarity=0.073  Sum_probs=53.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-Ccc-cHHHHHHcCCCEEEeCCC------------CChhhhccCccEE
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STP-KVEFVKELGADKVIDYRK------------TKYEDIEEKFDVL  216 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~-~~~~~~~~g~~~v~~~~~------------~~~~~~~~~~d~v  216 (327)
                      +|.|.| .|.+|....+.+......+++.+.. ++. ....+...+.......+.            ........++|+|
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiV   81 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV   81 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEE
Confidence            578999 9999999999988774556665543 333 333334444322211100            1111222479999


Q ss_pred             EeCCCCc---hhhhhhhcCCCcEEEeeC
Q 020320          217 YDTIGDC---KNSFVVAKDNAPIVDITW  241 (327)
Q Consensus       217 ~d~~g~~---~~~~~~l~~~g~~v~~g~  241 (327)
                      +||+|..   +.+-..++.+-+++..+.
T Consensus        82 iecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          82 VDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             EECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             EECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence            9999964   455566777766666543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=92.26  E-value=0.098  Score=42.60  Aligned_cols=73  Identities=22%  Similarity=0.401  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-----HHHH---HHcCCCEEE-eCCC-CChhhhccCccEEE
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-----VEFV---KELGADKVI-DYRK-TKYEDIEEKFDVLY  217 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-----~~~~---~~~g~~~v~-~~~~-~~~~~~~~~~d~v~  217 (327)
                      ...+|||+||+|-+|...+..+... |.+++++++++..     ...+   ...+++.+. |..+ ........+.+.++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~   80 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI   80 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhh
Confidence            3467999999999999999888878 8899888875432     2222   223444332 1111 12223446788888


Q ss_pred             eCCC
Q 020320          218 DTIG  221 (327)
Q Consensus       218 d~~g  221 (327)
                      .+.+
T Consensus        81 ~~~~   84 (312)
T d1qyda_          81 SALA   84 (312)
T ss_dssp             ECCC
T ss_pred             hhhh
Confidence            8765

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.22  E-value=0.25  Score=36.25  Aligned_cols=66  Identities=21%  Similarity=0.273  Sum_probs=50.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  223 (327)
                      +|-|+| .|.+|...+.-+... |.++++.++++++.+.+.+.++...     ....+.....|++|-|+...
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~~-----~~~~e~~~~~d~ii~~v~~~   67 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKA-GYSLVVSDRNPEAIADVIAAGAETA-----STAKAIAEQCDVIITMLPNS   67 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEEC-----SSHHHHHHHCSEEEECCSSH
T ss_pred             EEEEEe-hhHHHHHHHHHHHHC-CCeEEEEeCCcchhHHHHHhhhhhc-----ccHHHHHhCCCeEEEEcCCH
Confidence            477888 999998877666556 9999999999999888888776422     22344556789999998643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.16  E-value=0.063  Score=43.18  Aligned_cols=42  Identities=19%  Similarity=0.290  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCchHHHHHHH-HHHh--hcCCcEEEEeCCcccHHHH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQ-LAKH--FYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~-la~~--~~g~~~v~~~~~~~~~~~~  190 (327)
                      .|+.++|+||++++|.++++ +|+.  . |++++++.+++++++.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~-G~~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSP-GSVMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccC-CCEEEEEECCHHHHHHH
Confidence            57888999999999998765 4542  4 88999999998877655

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.09  E-value=0.33  Score=35.29  Aligned_cols=82  Identities=16%  Similarity=0.245  Sum_probs=55.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCCCC--chhhh
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTIGD--CKNSF  227 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~--~~~~~  227 (327)
                      ++.+.| +|.+|.+.+.-+... +.++++..+++++.+.+ +++|....     .+..+.....|++|-++-.  ....+
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~-~~~i~v~~r~~~~~~~l~~~~g~~~~-----~~~~~~~~~~dvIilavkp~~~~~vl   74 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQT-PHELIISGSSLERSKEIAEQLALPYA-----MSHQDLIDQVDLVILGIKPQLFETVL   74 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTS-SCEEEEECSSHHHHHHHHHHHTCCBC-----SSHHHHHHTCSEEEECSCGGGHHHHH
T ss_pred             EEEEEe-ccHHHHHHHHHHHhC-CCeEEEEcChHHhHHhhccccceeee-----chhhhhhhccceeeeecchHhHHHHh
Confidence            578888 999999877755555 77888888887776554 67776532     2344455689999988742  24455


Q ss_pred             hhhcCCCcEEEe
Q 020320          228 VVAKDNAPIVDI  239 (327)
Q Consensus       228 ~~l~~~g~~v~~  239 (327)
                      ..++++..++.+
T Consensus        75 ~~l~~~~~iis~   86 (152)
T d2ahra2          75 KPLHFKQPIISM   86 (152)
T ss_dssp             TTSCCCSCEEEC
T ss_pred             hhcccceeEecc
Confidence            556665555544

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.08  E-value=0.61  Score=33.77  Aligned_cols=90  Identities=16%  Similarity=0.247  Sum_probs=58.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcc---cHHHHHHcCCCEEEeCCCCChhhh----------------
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTP---KVEFVKELGADKVIDYRKTKYEDI----------------  209 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~---~~~~~~~~g~~~v~~~~~~~~~~~----------------  209 (327)
                      ++|.|+|++|.+|.-+..+.+... ..+++.......   -.+.++++.+..+.-.++......                
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~   82 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD   82 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence            789999999999999999998753 356666653322   235557788877754433322110                


Q ss_pred             ------ccCccEEEeCC-C--CchhhhhhhcCCCcEEEe
Q 020320          210 ------EEKFDVLYDTI-G--DCKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       210 ------~~~~d~v~d~~-g--~~~~~~~~l~~~g~~v~~  239 (327)
                            ...+|+++.+. |  ++..++.+++.+-++...
T Consensus        83 ~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          83 ALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             HHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             chheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence                  12578888875 5  346777777777665443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.03  E-value=0.11  Score=39.19  Aligned_cols=39  Identities=23%  Similarity=0.359  Sum_probs=33.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      +|.|+||+|.+|.+.++.+... |.++++..+++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~-G~~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATL-GHEIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5788877999999988888887 99999999988876544

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.95  E-value=0.16  Score=43.60  Aligned_cols=101  Identities=19%  Similarity=0.276  Sum_probs=66.0

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHc-----------C--CCE-EEeC
Q 020320          137 AIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKEL-----------G--ADK-VIDY  201 (327)
Q Consensus       137 a~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~-----------g--~~~-v~~~  201 (327)
                      ..+.++..++++|++++=+| | +.|..+.++|+.. ++ +++.++.++...+.+++.           |  ... .+..
T Consensus       205 i~~Il~~l~Lkpgd~fLDLG-C-G~G~~vl~aA~~~-g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~  281 (406)
T d1u2za_         205 LSDVYQQCQLKKGDTFMDLG-S-GVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL  281 (406)
T ss_dssp             HHHHHHHTTCCTTCEEEEES-C-TTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred             HHHHHHHhCCCCCCEEEeCC-C-CCcHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeee
Confidence            66677889999999888777 4 4688899999988 65 678888888877666431           1  111 1111


Q ss_pred             CCC----C-hhhhccCccEEEeCCC----C----chhhhhhhcCCCcEEEee
Q 020320          202 RKT----K-YEDIEEKFDVLYDTIG----D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       202 ~~~----~-~~~~~~~~d~v~d~~g----~----~~~~~~~l~~~g~~v~~g  240 (327)
                      ...    . +......+|+++-..-    .    +....+.|+|||+++...
T Consensus       282 ~~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         282 KKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             eechhhccccccccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            111    1 1123357888884322    1    145667899999998864

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.93  E-value=0.2  Score=37.88  Aligned_cols=94  Identities=14%  Similarity=0.043  Sum_probs=59.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCC-CEE--EeCCCCChhhhccCcc
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGA-DKV--IDYRKTKYEDIEEKFD  214 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~-~~v--~~~~~~~~~~~~~~~d  214 (327)
                      ...++++|++||=+| ||. |..++.+|+.  +.+++.++.+++..+.+++    .|. +.+  +..+..+.......+|
T Consensus        27 ~~l~~~~g~~VLDiG-cGs-G~~s~~lA~~--~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D  102 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVG-CGT-GGVTLELAGR--VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDID  102 (186)
T ss_dssp             HHHCCCTTCEEEEES-CTT-SHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEE
T ss_pred             HhcCCCCCCEEEEEE-CCe-Eccccccccc--ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcC
Confidence            567889999998887 443 4445566764  6688888899887777743    553 232  2222111222235789


Q ss_pred             EEEeCCC--Cc----hhhhhhhcCCCcEEEe
Q 020320          215 VLYDTIG--DC----KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       215 ~v~d~~g--~~----~~~~~~l~~~g~~v~~  239 (327)
                      .++...+  ..    ..+.+.|+++|+++..
T Consensus       103 ~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_         103 IAVVGGSGGELQEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             EEEESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEEeCccccchHHHHHHHHHhCcCCEEEEE
Confidence            8885543  22    4566789999988754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.66  E-value=0.17  Score=38.89  Aligned_cols=103  Identities=24%  Similarity=0.344  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC----  223 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  223 (327)
                      .|++|.|+| .|.+|..++.+++.+ |.++++.++...+..   ....    .  ..++.+.....|++.-++...    
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~---~~~~----~--~~~l~~l~~~~D~v~~~~plt~~T~  112 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGF-GAKVIAYDPYPMKGD---HPDF----D--YVSLEDLFKQSDVIDLHVPGIEQNT  112 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCSSC---CTTC----E--ECCHHHHHHHCSEEEECCCCCGGGT
T ss_pred             cceeeeeee-ccccccccccccccc-ceeeeccCCccchhh---hcch----h--HHHHHHHHHhcccceeeeccccccc
Confidence            478999999 999999999999998 999999886543211   0001    1  123444556688888766421    


Q ss_pred             ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCcee
Q 020320          224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKA  274 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~  274 (327)
                          ...+..|+++..++..+-...          ++   -+.+++.+++|++.-
T Consensus       113 ~li~~~~l~~mk~~a~lIN~aRG~v----------vd---e~aL~~aL~~g~i~g  154 (199)
T d1dxya1         113 HIINEAAFNLMKPGAIVINTARPNL----------ID---TQAMLSNLKSGKLAG  154 (199)
T ss_dssp             TSBCHHHHHHSCTTEEEEECSCTTS----------BC---HHHHHHHHHTTSEEE
T ss_pred             ccccHHHhhccCCceEEEecccHhh----------hh---hHHHHHHHhcCCcce
Confidence                456788889988888764331          12   345678888999874

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.65  E-value=0.12  Score=43.55  Aligned_cols=73  Identities=14%  Similarity=0.142  Sum_probs=46.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC---hhhhccCccEEEeCCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK---YEDIEEKFDVLYDTIG  221 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~~d~v~d~~g  221 (327)
                      ..+.+|||+||+|-+|..++..+... |.+++++++...... ............+-.+   +.....++|.|+.+++
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~-g~~V~~~d~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHE-GHYVIASDWKKNEHM-TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA   88 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSSS-CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEeCCCccch-hhhcccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence            45789999999999999998888888 888888875332211 1112222222122222   2223468999998875

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.58  E-value=0.25  Score=38.95  Aligned_cols=92  Identities=11%  Similarity=0.137  Sum_probs=60.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC-EEEeCCCCChhhhccCccEE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD-KVIDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~d~v  216 (327)
                      ......+.++||=+| ||. |..+..+++.  |.+++.++.+++..+.+++    .+.. ..+..+-.++. ....+|+|
T Consensus        35 ~~~~~~~~~~iLDiG-cGt-G~~~~~l~~~--~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-~~~~fD~I  109 (251)
T d1wzna1          35 KEDAKREVRRVLDLA-CGT-GIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-FKNEFDAV  109 (251)
T ss_dssp             HHTCSSCCCEEEEET-CTT-CHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-CCSCEEEE
T ss_pred             HHhcCCCCCEEEEeC-CCC-Cccchhhccc--ceEEEEEeeccccccccccccccccccchheehhhhhcc-cccccchH
Confidence            345667778999998 776 8888888884  7899999999988877754    2322 12222211111 12468988


Q ss_pred             EeCCCCc------------hhhhhhhcCCCcEEE
Q 020320          217 YDTIGDC------------KNSFVVAKDNAPIVD  238 (327)
Q Consensus       217 ~d~~g~~------------~~~~~~l~~~g~~v~  238 (327)
                      +...+..            ..+.++|+|+|.++.
T Consensus       110 ~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         110 TMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             EECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             hhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            8654321            345688999998875

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.55  E-value=0.17  Score=34.88  Aligned_cols=35  Identities=14%  Similarity=0.357  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      +.+|.|+| +|.+|.+.++.|+.+ |.++++.+.+++
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~l-G~~v~v~d~~~~   45 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRL-GVEVIAVDRYAD   45 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTT-TCEEEEEESSTT
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHC-CCEEEEEcCCCC
Confidence            35699999 899999999999999 999999986544

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.37  E-value=0.11  Score=33.19  Aligned_cols=33  Identities=15%  Similarity=0.349  Sum_probs=29.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      ++|.|+| +|.+|.|.++.++.+ |.++++.+.++
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~L-G~~v~vldp~~   34 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEPL-GIAVWPVGLDA   34 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGGG-TEEEEEECTTS
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHc-CCEEEEEcCCC
Confidence            4789999 899999999999999 99999888543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=91.32  E-value=0.13  Score=42.93  Aligned_cols=37  Identities=22%  Similarity=0.379  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .+++|||+||+|-+|..+++.+... |..|++++++..
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~-g~~V~~~~r~~~   43 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAP   43 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCC
Confidence            5799999999999999999999988 999998887554

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=91.20  E-value=0.08  Score=39.07  Aligned_cols=87  Identities=17%  Similarity=0.117  Sum_probs=51.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCE--EEeCCCCChhhhccCccEEEeCCCCc--hh-
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK--VIDYRKTKYEDIEEKFDVLYDTIGDC--KN-  225 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~d~v~d~~g~~--~~-  225 (327)
                      +|+|+| +|.+|.+.+..+... |..+....+++++.......+.+.  ...............+|++|-++-+.  .. 
T Consensus         2 kI~IiG-aG~iG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~~~~~~   79 (167)
T d1ks9a2           2 KITVLG-CGALGQLWLTALCKQ-GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDA   79 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHH
T ss_pred             EEEEEC-cCHHHHHHHHHHHHC-CCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeecccchHHH
Confidence            689999 799998877776666 888888888766443222222111  11000111223346799999988643  22 


Q ss_pred             ---hhhhhcCCCcEEEe
Q 020320          226 ---SFVVAKDNAPIVDI  239 (327)
Q Consensus       226 ---~~~~l~~~g~~v~~  239 (327)
                         ....++++..++.+
T Consensus        80 ~~~l~~~~~~~~~Iv~~   96 (167)
T d1ks9a2          80 VKSLASTLPVTTPILLI   96 (167)
T ss_dssp             HHHHHTTSCTTSCEEEE
T ss_pred             HHhhccccCcccEEeec
Confidence               33445556666655

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.18  E-value=0.36  Score=37.82  Aligned_cols=98  Identities=18%  Similarity=0.099  Sum_probs=61.4

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC----CCEEEeCCCCCh---hhhccCc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG----ADKVIDYRKTKY---EDIEEKF  213 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g----~~~v~~~~~~~~---~~~~~~~  213 (327)
                      +....++||++||=+|+ | .|..+..+++...+..+++++-++...+.+++.-    ....+.......   ......+
T Consensus        67 l~~l~ikpG~~VLDlGc-G-sG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v  144 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGA-S-AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKV  144 (230)
T ss_dssp             CCCCCCCTTCEEEEESC-C-SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCE
T ss_pred             HHhCCCCCCCEEEEeCE-E-cCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccccccccee
Confidence            46678999999999993 3 3667777887643457888888988877775532    112222222221   1122346


Q ss_pred             cEEEeCCCCc-------hhhhhhhcCCCcEEEee
Q 020320          214 DVLYDTIGDC-------KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       214 d~v~d~~g~~-------~~~~~~l~~~g~~v~~g  240 (327)
                      |+++...-..       ..+.+.|+|+|.++..-
T Consensus       145 ~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            6666555421       44567899999987763

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=90.89  E-value=0.2  Score=37.72  Aligned_cols=38  Identities=18%  Similarity=0.162  Sum_probs=32.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      ....+++|+|.| +|+.|+.|+..+..+ |.++.+...++
T Consensus        39 ~~~~~k~V~IIG-aGPAGL~AA~~la~~-G~~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVG-AGPAGLAFAINAAAR-GHQVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred             CCCCCcEEEEEC-ccHHHHHHHHHHHhh-ccceEEEeccC
Confidence            345678999999 899999999999988 99999888654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=90.81  E-value=1.4  Score=29.00  Aligned_cols=70  Identities=17%  Similarity=0.153  Sum_probs=49.2

Q ss_pred             CCCCCEEEEEcCCchHHHHH-HHHHHhhcCCcEEEEeCC-cccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          146 FKTGQTIFIVGGAGGVGTLV-IQLAKHFYGASHVVATTS-TPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a-~~la~~~~g~~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      ++..+++.+.| -|++|+.+ +++++.. |..|-..+.. ....+.+++.|.......+ .   ....++|+++-+.+
T Consensus         5 ~~~~~~ihfiG-igG~GMs~LA~~L~~~-G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~-~---~~i~~~d~vV~S~A   76 (96)
T d1p3da1           5 MRRVQQIHFIG-IGGAGMSGIAEILLNE-GYQISGSDIADGVVTQRLAQAGAKIYIGHA-E---EHIEGASVVVVSSA   76 (96)
T ss_dssp             CTTCCEEEEET-TTSTTHHHHHHHHHHH-TCEEEEEESCCSHHHHHHHHTTCEEEESCC-G---GGGTTCSEEEECTT
T ss_pred             chhCCEEEEEE-ECHHHHHHHHHHHHhC-CCEEEEEeCCCChhhhHHHHCCCeEEECCc-c---ccCCCCCEEEECCC
Confidence            46678899998 78888776 7888888 9999999864 3355666778876333222 2   23456888886655

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=90.80  E-value=0.18  Score=39.51  Aligned_cols=95  Identities=17%  Similarity=0.249  Sum_probs=61.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEE--EeCCCCChhhhccCccE
Q 020320          142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKV--IDYRKTKYEDIEEKFDV  215 (327)
Q Consensus       142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~~~~~~d~  215 (327)
                      +.+.+++|++||=+| ||. |..+..+++.  +.+++.++.|+...+.+++    .+.+.+  +..+..++.-....+|+
T Consensus        10 ~~~~~~~~~rILDiG-cGt-G~~~~~la~~--~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~   85 (234)
T d1xxla_          10 KTAECRAEHRVLDIG-AGA-GHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDI   85 (234)
T ss_dssp             HHHTCCTTCEEEEES-CTT-SHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEE
T ss_pred             HHhCCCCCCEEEEeC-CcC-cHHHHHHHHh--CCeEEEEeCChhhhhhhhhhhcccccccccccccccccccccccccce
Confidence            678999999999998 554 6667777774  6788888899887766643    443322  22221211111235898


Q ss_pred             EEeCCC-----C----chhhhhhhcCCCcEEEee
Q 020320          216 LYDTIG-----D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       216 v~d~~g-----~----~~~~~~~l~~~g~~v~~g  240 (327)
                      |+.+-.     .    .....+.|+|+|+++...
T Consensus        86 v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          86 ITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            885432     1    145668999999987754

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=90.71  E-value=0.4  Score=39.24  Aligned_cols=70  Identities=17%  Similarity=0.272  Sum_probs=43.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC--Cccc---HHHHHHcCCCEEEeCCCCC---hhhhcc--CccEEEeCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATT--STPK---VEFVKELGADKVIDYRKTK---YEDIEE--KFDVLYDTI  220 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~--~~~~---~~~~~~~g~~~v~~~~~~~---~~~~~~--~~d~v~d~~  220 (327)
                      +|||+||+|-+|...+..+... |.+++++++  ...+   ...+...+.-..+..+-.+   +.....  ++|.|+.++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~-g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            6999999999999998888777 898888763  2222   2233333322223222222   222222  479999987


Q ss_pred             C
Q 020320          221 G  221 (327)
Q Consensus       221 g  221 (327)
                      +
T Consensus        81 a   81 (338)
T d1orra_          81 G   81 (338)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=90.55  E-value=0.17  Score=40.53  Aligned_cols=50  Identities=20%  Similarity=0.339  Sum_probs=36.0

Q ss_pred             CCCCCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCcccH-H-HHHHcCC
Q 020320          145 GFKTGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTSTPKV-E-FVKELGA  195 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~~~~-~-~~~~~g~  195 (327)
                      ++-.|+++||+||+|  ++|.++++-+... |++++...++.++. + ..++++.
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~-Ga~Vil~~~~~~~~~~~~~~~~~~   55 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDRLPA   55 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTTSSS
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHc-CCEEEEEeCChHHHHHHHHHHcCC
Confidence            345789999999654  5999887766666 99999888776654 2 3344553

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.45  E-value=0.14  Score=41.26  Aligned_cols=33  Identities=21%  Similarity=0.259  Sum_probs=28.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      +++|+|+| +|..|++|+..++.. |.++.+...+
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~-G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIH-GLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTT-SCEEEEECSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhC-CCCEEEEeCC
Confidence            57899999 899999999988887 9998888754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=90.35  E-value=0.14  Score=41.70  Aligned_cols=37  Identities=32%  Similarity=0.347  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .|+++||+||+|  ++|.+.++.+... |+++++..+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~-Ga~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAA-GAEILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHT-TCEEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEeCchh
Confidence            688999999776  8999988888887 999998887654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=90.29  E-value=0.24  Score=41.24  Aligned_cols=39  Identities=26%  Similarity=0.348  Sum_probs=34.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV  187 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~  187 (327)
                      ..++|+|+||+|-+|..++..+... |.++++.++++.+.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~   40 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGL   40 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhC-CCeEEEEECCcchh
Confidence            4688999999999999999988888 99999999876654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.26  E-value=0.16  Score=38.36  Aligned_cols=35  Identities=17%  Similarity=0.221  Sum_probs=28.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTP  185 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~  185 (327)
                      +++|+|.| +|+.|+.++..++.. |.+ +.+..+++.
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~-G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARL-GYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHT-TCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHC-CCCeEEEEEecCc
Confidence            57899999 899999999999988 874 667776543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.21  E-value=0.53  Score=33.83  Aligned_cols=70  Identities=17%  Similarity=0.206  Sum_probs=41.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHHHHcC-CCEEE----eCCCCChhhhccCccEEEeCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELG-ADKVI----DYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~~~~g-~~~v~----~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      +|.|.||+|.+|..++.++...+-+..++.. .++. ...+.++. ++...    .....+..+..++.|+++-+.|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~-~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag   77 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT-PGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAG   77 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH-HHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc-chhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCC
Confidence            6899997799999999888877334555444 4433 33344432 11111    1122344455678888886666

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.15  E-value=0.46  Score=32.76  Aligned_cols=43  Identities=16%  Similarity=0.290  Sum_probs=35.0

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      ++.....++++++|.| +|.+|+-.+..++.+ |.++.++.+.+.
T Consensus        14 ~~~l~~~~~~~vvVvG-gG~ig~E~A~~l~~~-g~~vt~i~~~~~   56 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVG-GSKTAVEYGCFFNAT-GRRTVMLVRTEP   56 (121)
T ss_dssp             HHHCCSCCCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred             HHHHhhCCCCEEEEEC-CCHHHHHHHHHHHhc-chhheEeeccch
Confidence            3456677899999999 899999999999888 888888776543

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.11  E-value=0.44  Score=39.50  Aligned_cols=101  Identities=15%  Similarity=0.213  Sum_probs=63.6

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHH-----------cCC--CE--EEe
Q 020320          137 AIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKE-----------LGA--DK--VID  200 (327)
Q Consensus       137 a~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~-----------~g~--~~--v~~  200 (327)
                      ..+.++..+++++++|+=+| || .|..+.++|+.. ++ +++.++.++...+.+++           +|.  ..  .+.
T Consensus       140 ~~~~~~~~~l~~~~~vlD~G-cG-~G~~~~~~a~~~-~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~  216 (328)
T d1nw3a_         140 VAQMIDEIKMTDDDLFVDLG-SG-VGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER  216 (328)
T ss_dssp             HHHHHHHSCCCTTCEEEEET-CT-TSHHHHHHHHHC-CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEE
T ss_pred             HHHHHHHcCCCCCCEEEEcC-CC-CCHHHHHHHHHh-CCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEE
Confidence            34456788999999998888 44 577888888877 65 57788888877666543           221  11  122


Q ss_pred             CCC--CChhhhccCccEEEeCCC----C----chhhhhhhcCCCcEEEee
Q 020320          201 YRK--TKYEDIEEKFDVLYDTIG----D----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       201 ~~~--~~~~~~~~~~d~v~d~~g----~----~~~~~~~l~~~g~~v~~g  240 (327)
                      .+-  ..+.+....+|+++-..-    .    +....+.|+|||+++...
T Consensus       217 gd~~~~~~~~~~~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         217 GDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             CCTTSHHHHHHHHHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             CcccccccccccCcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            211  122233345788884322    1    144567899999998764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=89.84  E-value=1.2  Score=32.00  Aligned_cols=77  Identities=21%  Similarity=0.239  Sum_probs=47.3

Q ss_pred             EEEEEcCCchHHHHHHH-HHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCCChhhhccCccEEEeCCCC--chhh
Q 020320          151 TIFIVGGAGGVGTLVIQ-LAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKTKYEDIEEKFDVLYDTIGD--CKNS  226 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~-la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~--~~~~  226 (327)
                      +|.+.| +|.+|.+.+. +++ .++.++++..+++++.+.+. ++|.. +.+.. .    .....|++|=++-.  ....
T Consensus         2 kI~fIG-~G~MG~ai~~~l~~-~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~-~----~v~~~Div~lavkP~~~~~v   73 (152)
T d1yqga2           2 NVYFLG-GGNMAAAVAGGLVK-QGGYRIYIANRGAEKRERLEKELGVE-TSATL-P----ELHSDDVLILAVKPQDMEAA   73 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHH-HCSCEEEEECSSHHHHHHHHHHTCCE-EESSC-C----CCCTTSEEEECSCHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHH-CCCCcEEEEeCChhHHHHhhhhcccc-ccccc-c----cccccceEEEecCHHHHHHh
Confidence            578888 8999998766 555 42478888888888776664 56654 22221 1    23457899877752  2333


Q ss_pred             hhhhcCCCc
Q 020320          227 FVVAKDNAP  235 (327)
Q Consensus       227 ~~~l~~~g~  235 (327)
                      +.-+++.+.
T Consensus        74 ~~~l~~~~~   82 (152)
T d1yqga2          74 CKNIRTNGA   82 (152)
T ss_dssp             HTTCCCTTC
T ss_pred             HHHHhhccc
Confidence            334444443

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.62  E-value=0.21  Score=39.47  Aligned_cols=34  Identities=21%  Similarity=0.192  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .++|+|+| +|+.|++++..++.. |.++++..+++
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~-G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDA-GVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence            57899999 899999999988888 99999888643

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=89.20  E-value=0.65  Score=33.49  Aligned_cols=89  Identities=11%  Similarity=0.002  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHH---cCCCEEEeCCCCChhh----hccCccEEEeC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKE---LGADKVIDYRKTKYED----IEEKFDVLYDT  219 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~---~g~~~v~~~~~~~~~~----~~~~~d~v~d~  219 (327)
                      ..++++|+| .|.+|..+++.++.. |..+++++.++++. +.+++   .|.. ++..+..+...    .+..++.++-+
T Consensus         2 ~knHiII~G-~g~~g~~l~~~L~~~-~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~d~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           2 RKDHFIVCG-HSILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEeccchhHHHHHHHhhcCCcE-EEEccCcchHHHHHhccccCCEEEEc
Confidence            346899999 899999999999988 89999888776542 33333   3443 44444333221    13578999988


Q ss_pred             CCCc------hhhhhhhcCCCcEEEe
Q 020320          220 IGDC------KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       220 ~g~~------~~~~~~l~~~g~~v~~  239 (327)
                      .+.-      -...+.+.+..+++..
T Consensus        79 ~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          79 SDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             cccHHHHHHHHHHHHHhCCCCceEEE
Confidence            8743      1122344556555544

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=89.09  E-value=1  Score=36.32  Aligned_cols=61  Identities=16%  Similarity=0.239  Sum_probs=45.2

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---CcccHHHHHHcCCCEEEeCCC
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---STPKVEFVKELGADKVIDYRK  203 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---~~~~~~~~~~~g~~~v~~~~~  203 (327)
                      .+.....++.+|+... +|..|++++..++.+ |.+.+++..   ++.+.+..+.+|++.++...+
T Consensus        52 ~~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~-G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~  115 (292)
T d2bhsa1          52 EKRGEIKPGDVLIEAT-SGNTGIALAMIAALK-GYRMKLLMPDNMSQERRAAMRAYGAELILVTKE  115 (292)
T ss_dssp             HHTTSCCTTSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEEEESCCCHHHHHHHHHTTCEEEEECTT
T ss_pred             HHhCCcCCCceeeeec-ccchhHHHHHHHHhc-CcceEeeeccCchhhhhHHHHHhCCCcceeecc
Confidence            3455566666555544 999999999999999 988777773   566788889999986654433

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.08  E-value=0.45  Score=38.97  Aligned_cols=90  Identities=19%  Similarity=0.182  Sum_probs=51.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHH---HHHHcCC-CE--EEeCCCCChhhhccCccEE
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVE---FVKELGA-DK--VIDYRKTKYEDIEEKFDVL  216 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~---~~~~~g~-~~--v~~~~~~~~~~~~~~~d~v  216 (327)
                      ....++++||-+| || .|..++.+|++  |+ +++++..++....   ..++.+. +.  ++..+..++......+|++
T Consensus        31 ~~~~~~~~VLDiG-cG-~G~lsl~aa~~--Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~D~I  106 (311)
T d2fyta1          31 PHIFKDKVVLDVG-CG-TGILSMFAAKA--GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVI  106 (311)
T ss_dssp             GGGTTTCEEEEET-CT-TSHHHHHHHHT--TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEE
T ss_pred             cccCCcCEEEEEC-CC-CCHHHHHHHHc--CCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcCccccceEE
Confidence            4567899999998 66 66677777774  55 5666666665332   2233332 22  2333333332233578999


Q ss_pred             Ee-CCCC------c-hh----hhhhhcCCCcEE
Q 020320          217 YD-TIGD------C-KN----SFVVAKDNAPIV  237 (327)
Q Consensus       217 ~d-~~g~------~-~~----~~~~l~~~g~~v  237 (327)
                      +. ..+.      . ..    .-+.|+|+|+++
T Consensus       107 vse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         107 ISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             EECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             EEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            84 3332      1 11    235789999876

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.94  E-value=0.31  Score=37.05  Aligned_cols=39  Identities=18%  Similarity=0.296  Sum_probs=32.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      ++|.|+| +|.+|...++++... |.++++.+.+++.++.+
T Consensus         5 kkvaViG-aG~mG~~iA~~~a~~-G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIG-GGLMGAGIAQVAAAT-GHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHH
T ss_pred             EEEEEEC-cCHHHHHHHHHHHhC-CCcEEEEECChHHHHHH
Confidence            5799999 799999988888877 99999999988765444

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.81  E-value=1.2  Score=32.44  Aligned_cols=66  Identities=18%  Similarity=0.162  Sum_probs=48.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      ++|-+.| .|.+|...+.-+... |..+.+..+++++.+.+.+.++...     ....+.....|+++-++..
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~-g~~v~~~d~~~~~~~~~~~~~~~~~-----~~~~e~~~~~diii~~v~~   67 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKA-GYLLNVFDLVQSAVDGLVAAGASAA-----RSARDAVQGADVVISMLPA   67 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHTTCEEC-----SSHHHHHTSCSEEEECCSC
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHC-CCeEEEEECchhhhhhhhhhhcccc-----chhhhhccccCeeeecccc
Confidence            3688888 999998766655555 8999999999888888888775432     2234455677888888764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=88.66  E-value=0.29  Score=39.06  Aligned_cols=49  Identities=20%  Similarity=0.294  Sum_probs=35.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-------HHHHHHcCCCEEEe
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-------VEFVKELGADKVID  200 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-------~~~~~~~g~~~v~~  200 (327)
                      +|||+||+|-+|...+..++.. |.+++...+++-.       .+.+++...|.|++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~-g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih   58 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGK-NVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVIN   58 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTS-SEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhC-CCEEEEeechhccCCCHHHHHHHHHHcCCCEEEe
Confidence            6999999999999999999887 8888888765321       12334445666654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.59  E-value=0.28  Score=40.11  Aligned_cols=45  Identities=18%  Similarity=0.187  Sum_probs=34.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc--cHHHHHHcCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP--KVEFVKELGA  195 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~--~~~~~~~~g~  195 (327)
                      ++|||+||+|-+|..++..+... |.+|+++++...  ....+++++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCCCcccHHHHHHhcc
Confidence            58999999999999999988777 999998886432  3455555553

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=88.59  E-value=0.2  Score=40.24  Aligned_cols=36  Identities=17%  Similarity=0.384  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .++|||+||+|-+|..++..+... |.++++.+++..
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~-G~~V~~l~R~~~   38 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDL-GHPTFLLVREST   38 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEECCCc
Confidence            467999999999999998888887 899999887544

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=88.21  E-value=3.4  Score=29.82  Aligned_cols=88  Identities=9%  Similarity=0.058  Sum_probs=52.7

Q ss_pred             EEEEEcCCchHHHH-HHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---hh
Q 020320          151 TIFIVGGAGGVGTL-VIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---KN  225 (327)
Q Consensus       151 ~vlI~ga~g~~G~~-a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~~  225 (327)
                      ++.|.| +|.+|.. ....++...+..+++.+.++++.+.+ ++++...+.++- .++.+  ..+|+|+-++...   ..
T Consensus         3 rvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~ll~--~~iD~V~I~tp~~~H~~~   78 (167)
T d1xeaa1           3 KIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDY-RDVLQ--YGVDAVMIHAATDVHSTL   78 (167)
T ss_dssp             EEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSST-TGGGG--GCCSEEEECSCGGGHHHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccH-HHhcc--cccceecccccccccccc
Confidence            578999 8999864 45566655455666555666655444 667765443221 11211  3689999888643   45


Q ss_pred             hhhhhcCCCcEEEeeCCC
Q 020320          226 SFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       226 ~~~~l~~~g~~v~~g~~~  243 (327)
                      +..+++.+-. +.+..|.
T Consensus        79 ~~~al~~gk~-V~~EKP~   95 (167)
T d1xeaa1          79 AAFFLHLGIP-TFVDKPL   95 (167)
T ss_dssp             HHHHHHTTCC-EEEESCS
T ss_pred             cccccccccc-cccCCCC
Confidence            6667776544 4555443

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.06  E-value=0.6  Score=35.17  Aligned_cols=102  Identities=16%  Similarity=0.184  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC-----
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD-----  222 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~-----  222 (327)
                      .+.++.|+| .|.+|...+++++.+ |.++++.++......       ......  ..+.+.++..|+++-+...     
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~-------~~~~~~--~~l~ell~~sDii~i~~plt~~T~  111 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESL-GMYVYFYDIENKLPL-------GNATQV--QHLSDLLNMSDVVSLHVPENPSTK  111 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCCCC-------TTCEEC--SCHHHHHHHCSEEEECCCSSTTTT
T ss_pred             cceEEEEee-cccchhhhhhhcccc-cceEeeccccccchh-------hhhhhh--hhHHHHHhhccceeecccCCcchh
Confidence            578999999 999999999999998 999999986433110       001111  2345555678888877652     


Q ss_pred             -c--hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320          223 -C--KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK  273 (327)
Q Consensus       223 -~--~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  273 (327)
                       .  ...+..++++..++..+-....          +   .+++++.+.++++.
T Consensus       112 ~li~~~~l~~mk~~a~lIN~aRG~lv----------d---e~aL~~aL~~~~~~  152 (188)
T d1sc6a1         112 NMMGAKEISLMKPGSLLINASRGTVV----------D---IPALADALASKHLA  152 (188)
T ss_dssp             TCBCHHHHHHSCTTEEEEECSCSSSB----------C---HHHHHHHHHTTSEE
T ss_pred             hhccHHHHhhCCCCCEEEEcCcHHhh----------h---hHHHHHHHHcCCce
Confidence             1  5667888998888887643311          1   34567778888876

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.93  E-value=0.8  Score=36.94  Aligned_cols=30  Identities=13%  Similarity=0.194  Sum_probs=23.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEE
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVA  180 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~  180 (327)
                      +.+||+||++++|.+++..+... |++++.+
T Consensus         3 kVvlITGassGIG~a~A~~la~~-Ga~v~~v   32 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASD-PSQSFKV   32 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTC-TTCCEEE
T ss_pred             CEEEEccCCCHHHHHHHHHHHHC-CCCeEEE
Confidence            34688999999999988877777 8775544

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=87.84  E-value=1.4  Score=31.67  Aligned_cols=89  Identities=16%  Similarity=0.218  Sum_probs=56.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCC--ccc-HHHHHHcCCCEEEeCCCCChhh-----------------
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTS--TPK-VEFVKELGADKVIDYRKTKYED-----------------  208 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~--~~~-~~~~~~~g~~~v~~~~~~~~~~-----------------  208 (327)
                      ++|.|+|++|.+|.-+..+.+.... .+++.....  -+. .+.+.++....++-.++.....                 
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            3689999999999999999988632 456655532  222 3445678887766443322111                 


Q ss_pred             --------hccCccEEEeCC-C--CchhhhhhhcCCCcEEE
Q 020320          209 --------IEEKFDVLYDTI-G--DCKNSFVVAKDNAPIVD  238 (327)
Q Consensus       209 --------~~~~~d~v~d~~-g--~~~~~~~~l~~~g~~v~  238 (327)
                              ....+|+++.+. |  ++..++.+++.+-++..
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence                    002578888776 4  34667777777665443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=87.68  E-value=0.49  Score=39.08  Aligned_cols=70  Identities=19%  Similarity=0.335  Sum_probs=43.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC----CcccHHHHHHcC---CCEEE-eCCC-CChhhhcc--CccEEEeC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATT----STPKVEFVKELG---ADKVI-DYRK-TKYEDIEE--KFDVLYDT  219 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~----~~~~~~~~~~~g---~~~v~-~~~~-~~~~~~~~--~~d~v~d~  219 (327)
                      +|||+||+|-+|...+..+... |.+++++++    ........+.+.   ...+- |-.+ ..+....+  ++|+||.+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            6999999999999998888888 888888874    222233333332   33221 1111 11222233  79999998


Q ss_pred             CC
Q 020320          220 IG  221 (327)
Q Consensus       220 ~g  221 (327)
                      ++
T Consensus        81 Aa   82 (338)
T d1udca_          81 AG   82 (338)
T ss_dssp             CS
T ss_pred             CC
Confidence            75

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.63  E-value=0.56  Score=35.73  Aligned_cols=64  Identities=9%  Similarity=0.226  Sum_probs=38.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh----ccCccEEEeCCCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI----EEKFDVLYDTIGD  222 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~----~~~~d~v~d~~g~  222 (327)
                      ++|||+||+|-+|..++..+... +.  +++...+++...       ... +.....++.+.    ....|.++.++|.
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~-~~~~~v~~~~r~~~~~-------~~~-~~~~~~d~~~~~~~~~~~~d~vi~~~g~   72 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKALAE-------HPR-LDNPVGPLAELLPQLDGSIDTAFCCLGT   72 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHC-TTCCEEECCBSSCCCC-------CTT-EECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEEEEeCCchhh-------ccc-ccccccchhhhhhccccchheeeeeeee
Confidence            78999999999999999887777 54  344443432210       000 11111222221    2468999999874

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.32  E-value=0.86  Score=35.46  Aligned_cols=97  Identities=18%  Similarity=0.158  Sum_probs=62.5

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHHc----CCCEEEeCCCCC---hhhhccC
Q 020320          141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKEL----GADKVIDYRKTK---YEDIEEK  212 (327)
Q Consensus       141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~~----g~~~v~~~~~~~---~~~~~~~  212 (327)
                      +....++||++||=+| || .|..+..+++..+ .-++++++.++...+.+++.    +....+..+...   +......
T Consensus        66 l~~l~i~pG~~VLDlG-aG-sG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~  143 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLG-IA-SGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPK  143 (227)
T ss_dssp             CCCCCCCTTCEEEEET-TT-STTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCC
T ss_pred             ccccccCCCCEEEEec-cC-CCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccc
Confidence            4667899999999998 33 4777888998873 24688888898877766442    222222222221   1122356


Q ss_pred             ccEEEeCCCC-------chhhhhhhcCCCcEEEe
Q 020320          213 FDVLYDTIGD-------CKNSFVVAKDNAPIVDI  239 (327)
Q Consensus       213 ~d~v~d~~g~-------~~~~~~~l~~~g~~v~~  239 (327)
                      +|.++..+..       ...+...|+++|.++..
T Consensus       144 vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            8888855432       24556789999998765

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.21  E-value=0.41  Score=38.95  Aligned_cols=38  Identities=24%  Similarity=0.242  Sum_probs=31.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .....++|+|+| +|..|+.++..++.. |.++.+...++
T Consensus        26 ~~~~pkkV~IIG-aG~aGLsaA~~L~~~-G~~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVG-AGMAGLSAAYVLAGA-GHQVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEEC-CBHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred             CCCCCCeEEEEC-CCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence            345567999999 899999999988888 99888887643

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=87.11  E-value=0.33  Score=38.18  Aligned_cols=87  Identities=14%  Similarity=0.106  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCE-EEeCCCCChhhhccCccEEEeCCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADK-VIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      .++++||=+| || .|..+..+++.  |.+++.++.|++.++.+++    .+... ++..+-.++. ..+.+|+|+...+
T Consensus        36 ~~~~~vLDiG-CG-~G~~~~~l~~~--g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~i~~~~~  110 (246)
T d1y8ca_          36 LVFDDYLDLA-CG-TGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-INRKFDLITCCLD  110 (246)
T ss_dssp             CCTTEEEEET-CT-TSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-CSCCEEEEEECTT
T ss_pred             CCCCeEEEEe-Cc-CCHHHHHHHHh--CCccEeeccchhhhhhccccccccCccceeeccchhhhc-ccccccccceeee
Confidence            3457899888 66 56777788774  7889999999988777744    34321 2221111111 1246899986433


Q ss_pred             Cc-------------hhhhhhhcCCCcEEE
Q 020320          222 DC-------------KNSFVVAKDNAPIVD  238 (327)
Q Consensus       222 ~~-------------~~~~~~l~~~g~~v~  238 (327)
                      ..             ..+.+.|+|+|.++.
T Consensus       111 ~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             GGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            21             345678899998774

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=86.99  E-value=0.46  Score=39.23  Aligned_cols=71  Identities=13%  Similarity=0.080  Sum_probs=42.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEE-eCCC-CChhh-hccCccEEEeCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVI-DYRK-TKYED-IEEKFDVLYDTIG  221 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~-~~~~-~~~~~-~~~~~d~v~d~~g  221 (327)
                      +|||+||+|-+|...++.+...+..++++.+....+.... +....+.+. |-.. ....+ ...++|.|+.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence            6999999999999988777666235777776543332222 222223222 1111 22222 3457999999876

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=86.98  E-value=0.59  Score=32.16  Aligned_cols=38  Identities=24%  Similarity=0.389  Sum_probs=31.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .++..++++|.| +|.+|+-++..++.+ |.++.++.+.+
T Consensus        18 ~l~~p~~v~IiG-gG~iG~E~A~~l~~~-g~~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVG-SGYIAVELINVIKRL-GIDSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSS
T ss_pred             ccCCCCEEEEEC-CchHHHHHHHHHHhc-cccceeeehhc
Confidence            344568999999 899999999999988 99988888654

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.90  E-value=0.25  Score=38.62  Aligned_cols=90  Identities=14%  Similarity=0.156  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC---CEE--EeCCCCChhhhc--cCccEEE-e
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA---DKV--IDYRKTKYEDIE--EKFDVLY-D  218 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~---~~v--~~~~~~~~~~~~--~~~d~v~-d  218 (327)
                      .+|.+||=+| || .|..+..+++.. +.++++++.++...+.+++...   ..+  +...........  ..+|.++ |
T Consensus        52 ~~g~~VLdIG-cG-~G~~a~~~a~~~-~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD  128 (229)
T d1zx0a1          52 SKGGRVLEVG-FG-MAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYD  128 (229)
T ss_dssp             TTCEEEEEEC-CT-TSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred             cCCCeEEEee-cc-chHHHHHHHHcC-CCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeec
Confidence            5788999998 44 466778888865 6678888889998888866431   111  111111111111  3577774 7


Q ss_pred             CCCCc-------------hhhhhhhcCCCcEEEe
Q 020320          219 TIGDC-------------KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       219 ~~g~~-------------~~~~~~l~~~g~~v~~  239 (327)
                      .+...             ..+.+.|+|||+++..
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         129 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             ccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            65421             3356789999998753

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.67  E-value=1.4  Score=36.66  Aligned_cols=58  Identities=26%  Similarity=0.338  Sum_probs=44.8

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---CcccHHHHHHcCCCEEE
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---STPKVEFVKELGADKVI  199 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---~~~~~~~~~~~g~~~v~  199 (327)
                      +.+...+++++.|+... +|..|.+++.+|+.+ |.+.+++..   ++++.+.++.+|++.+.
T Consensus        88 a~~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~-Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~  148 (355)
T d1jbqa_          88 AERDGTLKPGDTIIEPT-SGNTGIGLALAAAVR-GYRCIIVMPEKMSSEKVDVLRALGAEIVR  148 (355)
T ss_dssp             HHHHTCSCTTCEEEEEC-SSHHHHHHHHHHHHH-TCEEEEEECSCCCHHHHHHHHHTTCEEEE
T ss_pred             HHHcCCcccCceEEEec-ccchhhHHHHHHHhc-cCCeEEEeeccchHHHHHHHHhcCCeEEE
Confidence            34456667766655554 999999999999998 998887773   56688888999998665

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=86.61  E-value=0.75  Score=35.87  Aligned_cols=48  Identities=27%  Similarity=0.328  Sum_probs=39.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGAD  196 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~  196 (327)
                      -.|.+|+|.| .|.+|..+++++... |+++++++.+..+...+ .+.|.+
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~-Gakvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTE-GAKLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEeecccHHHHHHHHHhcCCc
Confidence            4789999999 999999999999998 99999888877776555 445554

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=86.49  E-value=0.73  Score=34.53  Aligned_cols=90  Identities=14%  Similarity=0.129  Sum_probs=51.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc---cHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP---KVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~---~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--  223 (327)
                      =+|.|+||+|-+|+-.++++..+...++..+..+..   +...+ ..+...... ...........+.|++|-+.+..  
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dvvf~alp~~~s   84 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLP-NLVAVKDADFSNVDAVFCCLPHGTT   84 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCC-CCBCGGGCCGGGCSEEEECCSSSHH
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccc-cchhhhhhhhcccceeeeccccchH
Confidence            367999999999999999999886666555543222   22211 111111000 00011111235799999998743  


Q ss_pred             hhhhhhhcCCCcEEEee
Q 020320          224 KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ~~~~~~l~~~g~~v~~g  240 (327)
                      ......+...+.++...
T Consensus        85 ~~~~~~l~~~~~~v~~~  101 (183)
T d2cvoa1          85 QEIIKGLPQELKIVDLS  101 (183)
T ss_dssp             HHHHHTSCSSCEEEECS
T ss_pred             HHHHHHHHhcCcccccc
Confidence            34445566677766553

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.49  E-value=0.47  Score=36.95  Aligned_cols=38  Identities=24%  Similarity=0.338  Sum_probs=31.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .+.+++|+|+| +|+.|+.++..++.. |.++.++..+++
T Consensus        46 ~~~~k~VvIIG-aGpAGl~aA~~l~~~-G~~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVG-AGPSGSEAARVLMES-GYTVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred             ccCCceEEEEc-ccHHHHHHHHHHHHh-ccceeeEeeccc
Confidence            35789999999 899999999988888 998888875543

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=86.05  E-value=1  Score=35.87  Aligned_cols=94  Identities=10%  Similarity=0.048  Sum_probs=60.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCCChhhhccCccEEEeCCC--
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKTKYEDIEEKFDVLYDTIG--  221 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~d~v~d~~g--  221 (327)
                      ...++.+||=+| ||. |..+..+++...+.+++.++.++...+.+++-..... +..+..+..-....+|+|+....  
T Consensus        81 ~~~~~~~iLDiG-cG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~  158 (268)
T d1p91a_          81 LDDKATAVLDIG-CGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPC  158 (268)
T ss_dssp             SCTTCCEEEEET-CTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCC
T ss_pred             cCCCCCEEEEeC-CCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhccCCCCCEEEEeecCCHH
Confidence            345677888887 554 5666677776546788888999998888876443221 22222222112245888885543  


Q ss_pred             CchhhhhhhcCCCcEEEee
Q 020320          222 DCKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       222 ~~~~~~~~l~~~g~~v~~g  240 (327)
                      ......+.|+|+|.++...
T Consensus       159 ~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         159 KAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             CHHHHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHHhCCCcEEEEEe
Confidence            3367789999999998764

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.96  E-value=0.75  Score=31.46  Aligned_cols=35  Identities=14%  Similarity=0.322  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      .++++|.| +|.+|+-+++.+..+ |.++.++.+.+.
T Consensus        22 p~~v~IiG-gG~ig~E~A~~l~~~-G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIG-GGYIGIELGTAYANF-GTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred             CCeEEEEC-CCccceeeeeeeccc-ccEEEEEEecce
Confidence            47899999 899999999999998 999888876554

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.90  E-value=0.89  Score=37.24  Aligned_cols=90  Identities=21%  Similarity=0.185  Sum_probs=50.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccH---HHHHHcCC-CE--EEeCCCCChhhhccCccEEE
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKV---EFVKELGA-DK--VIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~---~~~~~~g~-~~--v~~~~~~~~~~~~~~~d~v~  217 (327)
                      .+.+|++||-+| ||. |..+..+|+ . |+ ++++++.++...   +.++..+. +.  ++..+..+.......+|+++
T Consensus        30 ~~~~~~~VLDiG-cG~-G~ls~~aa~-~-Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~~~~~~D~iv  105 (316)
T d1oria_          30 HLFKDKVVLDVG-SGT-GILCMFAAK-A-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIII  105 (316)
T ss_dssp             HHHTTCEEEEET-CTT-SHHHHHHHH-T-TCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEE
T ss_pred             ccCCcCEEEEEe-cCC-cHHHHHHHH-h-CCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcccccceeEEEe
Confidence            356889999998 665 777777777 4 65 566666665422   22233342 22  22333232222235688887


Q ss_pred             eC-CCC-------c----hhhhhhhcCCCcEEE
Q 020320          218 DT-IGD-------C----KNSFVVAKDNAPIVD  238 (327)
Q Consensus       218 d~-~g~-------~----~~~~~~l~~~g~~v~  238 (327)
                      .. .+.       .    ...-+.|+|+|+++.
T Consensus       106 s~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~iiP  138 (316)
T d1oria_         106 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP  138 (316)
T ss_dssp             ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred             eeeeeeeeccHHHHHHHHHHHHhcCCCCeEEEe
Confidence            43 331       1    223478999998763

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=85.87  E-value=1.2  Score=34.66  Aligned_cols=93  Identities=17%  Similarity=0.175  Sum_probs=58.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHH----HcCCCEEEeCCCCChh---hh-------c
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVK----ELGADKVIDYRKTKYE---DI-------E  210 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~---~~-------~  210 (327)
                      ....++||-+|  ...|..++.+|+++. +.+++.+..+++..+.++    +.|.+.-+.....+..   +.       .
T Consensus        57 ~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~  134 (227)
T d1susa1          57 LINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNH  134 (227)
T ss_dssp             HHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGT
T ss_pred             hcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccC
Confidence            34567899998  667888888888773 356777778888766664    4564332221111221   11       1


Q ss_pred             cCccEEE-eCCCC-----chhhhhhhcCCCcEEEee
Q 020320          211 EKFDVLY-DTIGD-----CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       211 ~~~d~v~-d~~g~-----~~~~~~~l~~~g~~v~~g  240 (327)
                      ..+|.+| |+--.     ...++..|++||.++.=.
T Consensus       135 ~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN  170 (227)
T d1susa1         135 GSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  170 (227)
T ss_dssp             TCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred             CceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence            3599998 55422     156788999999987643

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=85.86  E-value=1.3  Score=30.76  Aligned_cols=85  Identities=13%  Similarity=0.061  Sum_probs=54.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh----hccCccEEEeCCCCc--
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED----IEEKFDVLYDTIGDC--  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~~~~~d~v~d~~g~~--  223 (327)
                      ++++|+| .|.+|..++..++   +..+++++.++++.+.+...|...+ ..+..+...    .+..++.++-+...-  
T Consensus         1 kHivI~G-~g~~g~~l~~~L~---~~~i~vi~~d~~~~~~~~~~~~~~i-~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~   75 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR---GSEVFVLAEDENVRKKVLRSGANFV-HGDPTRVSDLEKANVRGARAVIVNLESDSE   75 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC---GGGEEEEESCTTHHHHHHHTTCEEE-ESCTTSHHHHHHTTCTTCSEEEECCSSHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHc---CCCCEEEEcchHHHHHHHhcCcccc-ccccCCHHHHHHhhhhcCcEEEEeccchhh
Confidence            4689999 8999997777664   4567777888888888888876544 333333221    135788888777642  


Q ss_pred             ----hhhhhhhcCCCcEEEe
Q 020320          224 ----KNSFVVAKDNAPIVDI  239 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~  239 (327)
                          -...+.+.|..+++..
T Consensus        76 n~~~~~~~r~~~~~~~iia~   95 (129)
T d2fy8a1          76 TIHCILGIRKIDESVRIIAE   95 (129)
T ss_dssp             HHHHHHHHHHHCSSSCEEEE
T ss_pred             hHHHHHHHHHHCCCceEEEE
Confidence                2233455666665554

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=85.81  E-value=0.64  Score=33.93  Aligned_cols=90  Identities=16%  Similarity=0.225  Sum_probs=53.5

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHhhcCCcEEEEeC-Ccc--cHHHHHHcCCCEEEeCCCCChhh--hccCccEEEeCCCCc
Q 020320          150 QTIFIVGGAGGVGT-LVIQLAKHFYGASHVVATT-STP--KVEFVKELGADKVIDYRKTKYED--IEEKFDVLYDTIGDC  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~-~a~~la~~~~g~~~v~~~~-~~~--~~~~~~~~g~~~v~~~~~~~~~~--~~~~~d~v~d~~g~~  223 (327)
                      -++.|+| +|.+|. ...++++.....+.+.+.. +++  ...+++++|...... .-+.+.+  ...++|+||+++...
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~-~~d~l~~~~~~~~iDiVf~ATpag   82 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA-GVEGLIKLPEFADIDFVFDATSAS   82 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS-HHHHHHHSGGGGGEEEEEECSCHH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc-ceeeeeecccccccCEEEEcCCch
Confidence            4789999 999986 4567777664556666653 433  346678888653321 1111222  124799999987632


Q ss_pred             ---h--hhhhhhcCCCcEEEeeC
Q 020320          224 ---K--NSFVVAKDNAPIVDITW  241 (327)
Q Consensus       224 ---~--~~~~~l~~~g~~v~~g~  241 (327)
                         .  ...+.++.|-.++....
T Consensus        83 ~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          83 AHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             HHHHHHHHHHHHCTTCEEEECST
T ss_pred             hHHHhHHHHHHHHcCCEEEEccc
Confidence               2  23444666666666543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=85.78  E-value=0.84  Score=31.54  Aligned_cols=38  Identities=21%  Similarity=0.363  Sum_probs=31.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      ++++++++|.| +|.+|.-++..++.+ |.++.++.+++.
T Consensus        27 ~~~~~~vvIIG-gG~iG~E~A~~l~~~-g~~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVG-GGVIGLELAATARTA-GVHVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred             hhcCCeEEEEC-cchhHHHHHHHhhcc-cceEEEEeeccc
Confidence            45679999999 899999999988888 998888876543

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=85.74  E-value=1.7  Score=36.51  Aligned_cols=56  Identities=16%  Similarity=0.184  Sum_probs=43.2

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---CcccHHHHHHcCCCEEEeC
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---STPKVEFVKELGADKVIDY  201 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---~~~~~~~~~~~g~~~v~~~  201 (327)
                      .+++++.+ +|...+|..|.+++.+++.+ |.+.+++..   ++.+...++.+|++.+...
T Consensus       139 ~~~~~g~~-VVeaSSGN~GiAlA~~aa~l-Gik~~Iv~P~~~~~~K~~~ira~GAeVi~~~  197 (382)
T d1wkva1         139 RRVEKGSL-VADATSSNFGVALSAVARLY-GYRARVYLPGAAEEFGKLLPRLLGAQVIVDP  197 (382)
T ss_dssp             TTSCTTCE-EEEECCHHHHHHHHHHHHHT-TCEEEEEEETTSCHHHHHHHHHTTCEEEEET
T ss_pred             hccCCCCE-EEEeCCcHHHHHHHHHHHHc-CCCEEEEeeccccccccccccccCcceeecC
Confidence            34667765 45555899999999999998 998877773   5567788899999877654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=85.63  E-value=1.8  Score=31.84  Aligned_cols=89  Identities=12%  Similarity=0.003  Sum_probs=55.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCE---EEeCCCCChhhhccCccEEEeCCCCc---
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK---VIDYRKTKYEDIEEKFDVLYDTIGDC---  223 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~d~v~d~~g~~---  223 (327)
                      .+|-++| .|.+|...+.-+... |.++++..+++++.+.+.+.++..   .......+..+.....|.++-++...   
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v   80 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDH-GFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAV   80 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHH
Confidence            4588999 999998766666556 899999999999888776655321   11111122333446678888776532   


Q ss_pred             ----hhhhhhhcCCCcEEEee
Q 020320          224 ----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       224 ----~~~~~~l~~~g~~v~~g  240 (327)
                          +.....++++..++.++
T Consensus        81 ~~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          81 DNFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             HHHHHHHHHHCCTTCEEEECS
T ss_pred             HHHHHHHHhccccCcEEEecC
Confidence                23344556665555554

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=85.47  E-value=3.2  Score=26.73  Aligned_cols=66  Identities=17%  Similarity=0.200  Sum_probs=45.6

Q ss_pred             CEEEEEcCCchHHHHH-HHHHHhhcCCcEEEEeCCc-ccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320          150 QTIFIVGGAGGVGTLV-IQLAKHFYGASHVVATTST-PKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG  221 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a-~~la~~~~g~~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g  221 (327)
                      .+|-++| -|++|+.+ +++++.. |..|-..+..+ +..+.++++|.......+..    .+.++|+++-+.+
T Consensus         2 ~~ihfiG-IgG~GMs~LA~~L~~~-G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~----~i~~~d~vV~SsA   69 (89)
T d1j6ua1           2 MKIHFVG-IGGIGMSAVALHEFSN-GNDVYGSNIEETERTAYLRKLGIPIFVPHSAD----NWYDPDLVIKTPA   69 (89)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHTTCCEESSCCTT----SCCCCSEEEECTT
T ss_pred             cEEEEEe-ECHHHHHHHHHHHHhC-CCeEEEEeCCCChhHHHHHHCCCeEEeeeccc----ccCCCCEEEEecC
Confidence            3577778 78888865 6888888 99999998654 45677889998743332222    2356888886654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=85.47  E-value=0.45  Score=38.19  Aligned_cols=32  Identities=13%  Similarity=0.150  Sum_probs=27.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .+||+||++++|.++++.+... |+++++..++
T Consensus         4 VAlITGas~GIG~aiA~~la~~-Ga~V~i~~~~   35 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHR   35 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCC
Confidence            4689999999999988887777 9999887754

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.45  E-value=0.89  Score=37.45  Aligned_cols=90  Identities=20%  Similarity=0.201  Sum_probs=48.9

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHH----HHcCC-CE--EEeCCCCChhhhccCccE
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFV----KELGA-DK--VIDYRKTKYEDIEEKFDV  215 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~----~~~g~-~~--v~~~~~~~~~~~~~~~d~  215 (327)
                      ....+|++||-+| ||. |..+..+++ . |+ +++++..++ ....+    ++.+. +.  ++..+..+.......+|+
T Consensus        34 ~~~~~~~~VLDlG-cGt-G~ls~~aa~-~-Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~~~~~D~  108 (328)
T d1g6q1_          34 KDLFKDKIVLDVG-CGT-GILSMFAAK-H-GAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDI  108 (328)
T ss_dssp             HHHHTTCEEEEET-CTT-SHHHHHHHH-T-CCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEE
T ss_pred             cccCCcCEEEEeC-CCC-CHHHHHHHH-h-CCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccCcccceeE
Confidence            3446789999998 664 666666666 4 65 555555554 33333    33442 22  233222222212246898


Q ss_pred             EEeC-CCC-------c----hhhhhhhcCCCcEEE
Q 020320          216 LYDT-IGD-------C----KNSFVVAKDNAPIVD  238 (327)
Q Consensus       216 v~d~-~g~-------~----~~~~~~l~~~g~~v~  238 (327)
                      ++.. .+.       .    ...-+.|+|+|+++.
T Consensus       109 i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~iiP  143 (328)
T d1g6q1_         109 IISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP  143 (328)
T ss_dssp             EEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred             EEEEecceeeccchhHHHHHHHHHhccCCCeEEEe
Confidence            8753 331       1    122367899998753

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=85.18  E-value=0.67  Score=36.05  Aligned_cols=35  Identities=14%  Similarity=0.271  Sum_probs=29.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      +..++|+|+| +|..|++++..+... |.++.++.+.
T Consensus         4 ~~~~kVvVIG-aGiaGl~~A~~L~~~-G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLG-SGVIGLSSALILARK-GYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred             CCCCcEEEEC-ccHHHHHHHHHHHHC-CCCEEEEeCC
Confidence            4456899999 899999999888888 8898888764

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=85.13  E-value=0.46  Score=35.78  Aligned_cols=39  Identities=15%  Similarity=0.177  Sum_probs=31.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV  190 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~  190 (327)
                      ++|.|+| +|.+|...+.++... |.++++.+.+++.++.+
T Consensus         5 ~~vaViG-aG~mG~~iA~~~a~~-G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLG-AGIMGGGIAYQSASK-GTPILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEEC-CHHHHHHHHHHHHHT-TCCEEEECSSHHHHHHH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhC-CCeEEEEECCHHHHhhh
Confidence            5689999 799999887777766 99999999988765444

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.97  E-value=0.48  Score=40.02  Aligned_cols=32  Identities=16%  Similarity=0.277  Sum_probs=27.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT  181 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~  181 (327)
                      |.+|||+||+|-+|..++..+... |.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~-g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKK-NYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEe
Confidence            689999999999999988888877 88888875

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.97  E-value=1.3  Score=33.16  Aligned_cols=89  Identities=15%  Similarity=0.152  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEE-EeCCCCChhhhccCccEEEeCC--
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKV-IDYRKTKYEDIEEKFDVLYDTI--  220 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v-~~~~~~~~~~~~~~~d~v~d~~--  220 (327)
                      ++.+||=+| || .|..+..+++.  |.++++++.+++..+.++    +.+.+.+ +...+.........+|+|+...  
T Consensus        30 ~~grvLDiG-cG-~G~~~~~la~~--g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~fD~I~~~~~~  105 (198)
T d2i6ga1          30 APGRTLDLG-CG-NGRNSLYLAAN--GYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTFDGEYDFILSTVVM  105 (198)
T ss_dssp             CSCEEEEET-CT-TSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCCCCCEEEEEEESCG
T ss_pred             CCCcEEEEC-CC-CCHHHHHHHHH--hhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccccccccEEEEeeee
Confidence            334899998 76 78888888874  889999999988777654    3454432 1111110011124688888532  


Q ss_pred             CC---------chhhhhhhcCCCcEEEee
Q 020320          221 GD---------CKNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       221 g~---------~~~~~~~l~~~g~~v~~g  240 (327)
                      ..         +..+.++|+++|.++...
T Consensus       106 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1         106 MFLEAQTIPGLIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             GGSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ecCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            11         134556799999988764

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=84.92  E-value=1.9  Score=31.06  Aligned_cols=73  Identities=15%  Similarity=0.124  Sum_probs=43.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccH-HHHHHc-------CCCEEEeCCCCChhhhccCccEEE
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKV-EFVKEL-------GADKVIDYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~-~~~~~~-------g~~~v~~~~~~~~~~~~~~~d~v~  217 (327)
                      +...+|.|.| +|.+|..++.++... +. +++..+.++++. ..+.++       +....+ ....+.....++.|+++
T Consensus         5 ~k~~KI~IIG-aG~VG~~lA~~l~~~-~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~-~~~~~~~~~~~~adiVv   81 (154)
T d1pzga1           5 QRRKKVAMIG-SGMIGGTMGYLCALR-ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSV-RAEYSYEAALTGADCVI   81 (154)
T ss_dssp             SCCCEEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCE-EEECSHHHHHTTCSEEE
T ss_pred             cCCCcEEEEC-CCHHHHHHHHHHHhC-CCceEEEEEeccccchhHHHHHhhhccccCCeeEE-eccCchhhhhcCCCeEE
Confidence            5567899999 699998888777776 64 555555565532 222221       211111 11233344567899999


Q ss_pred             eCCCC
Q 020320          218 DTIGD  222 (327)
Q Consensus       218 d~~g~  222 (327)
                      -+.|.
T Consensus        82 itag~   86 (154)
T d1pzga1          82 VTAGL   86 (154)
T ss_dssp             ECCSC
T ss_pred             Eeccc
Confidence            87764

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=84.86  E-value=5.4  Score=29.03  Aligned_cols=91  Identities=18%  Similarity=0.226  Sum_probs=53.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC--CcccHHHHHHcC-----CCEEEeC---------------CCCChhh
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATT--STPKVEFVKELG-----ADKVIDY---------------RKTKYED  208 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~--~~~~~~~~~~~g-----~~~v~~~---------------~~~~~~~  208 (327)
                      +|.|.| .|-+|.++.+++... +.+++++-.  +.+...++-++.     ...-+..               ...+..+
T Consensus         2 kigING-fGRIGR~~~R~l~~~-~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~   79 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSR-GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE   79 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhcC-CCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHH
Confidence            578898 999999999988877 777665543  233344443332     0000100               1111111


Q ss_pred             h---ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          209 I---EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       209 ~---~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      .   ..++|+|+||+|..   ..+...+..+.+-|.+..+.
T Consensus        80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             CcccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence            1   13799999999954   55666777776666665543

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.77  E-value=1.7  Score=35.48  Aligned_cols=60  Identities=20%  Similarity=0.260  Sum_probs=47.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe---CCcccHHHHHHcCCCEEEe
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT---TSTPKVEFVKELGADKVID  200 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~---~~~~~~~~~~~~g~~~v~~  200 (327)
                      +.+...++++...+|...+|..|.+++.+++.+ |.+.+++.   .++.+.+.++.+|++.++.
T Consensus        55 a~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~-g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~  117 (320)
T d1z7wa1          55 AEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAK-GYKLIITMPASMSTERRIILLAFGVELVLT  117 (320)
T ss_dssp             HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHH-TCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             HHHcCCCCCCCceEEeeCCchHHHHHHHHHHhh-ccceEEeehhhhhhhhhhhhhccCcceEEe
Confidence            345566777777777777999999999999999 98877776   3566888889999876653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=84.35  E-value=0.99  Score=31.00  Aligned_cols=35  Identities=20%  Similarity=0.246  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      ..++++|+| +|.+|+-.++.++.+ |.++.++.+++
T Consensus        21 ~p~~i~IiG-~G~ig~E~A~~l~~~-G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIG-AGVIGLELGSVWARL-GAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred             CCCeEEEEC-CChHHHHHHHHHHHc-CCceEEEEeec
Confidence            348899999 899999999999998 99988888654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.17  E-value=0.48  Score=38.01  Aligned_cols=32  Identities=34%  Similarity=0.491  Sum_probs=28.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .|+|+| +|+.|++++..++.. |.++.++.+.+
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~-G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKA-GIDNVILERQT   35 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHH-TCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence            589999 899999999999988 99999998654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=83.91  E-value=2.4  Score=30.16  Aligned_cols=33  Identities=21%  Similarity=0.237  Sum_probs=24.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTS  183 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~  183 (327)
                      +|.|.||+|.+|..++.++...+-+..++. +..
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~   35 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGRE   35 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccch
Confidence            588999889999999888887722444444 444

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.71  E-value=1.8  Score=35.54  Aligned_cols=32  Identities=28%  Similarity=0.446  Sum_probs=27.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT  182 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~  182 (327)
                      +.|||+||+|-+|...+..+... |.+++++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~-g~~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIEN-GYDCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC-cCeEEEEEC
Confidence            57899999999999888887777 888888764

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=83.50  E-value=2.4  Score=29.04  Aligned_cols=39  Identities=13%  Similarity=0.135  Sum_probs=31.6

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      ..-..+++++|.| +|.+|+-++..+..+ |.++.++.+.+
T Consensus        25 ~~~~~~k~vvViG-gG~iG~E~A~~l~~~-g~~Vtlie~~~   63 (123)
T d1nhpa2          25 TVDPEVNNVVVIG-SGYIGIEAAEAFAKA-GKKVTVIDILD   63 (123)
T ss_dssp             HTCTTCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred             hhccCCCEEEEEC-ChHHHHHHHHHhhcc-ceEEEEEEecC
Confidence            3445678999999 899999999999988 99888776543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.36  E-value=3  Score=29.65  Aligned_cols=71  Identities=20%  Similarity=0.222  Sum_probs=38.4

Q ss_pred             EEEEEcCCchHHHHHHHHHH-hhc-CCcEEEEeCCcccHHHHHHcC-C---CEE-EeCCCCChhhhccCccEEEeCCCC
Q 020320          151 TIFIVGGAGGVGTLVIQLAK-HFY-GASHVVATTSTPKVEFVKELG-A---DKV-IDYRKTKYEDIEEKFDVLYDTIGD  222 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~-~~~-g~~~v~~~~~~~~~~~~~~~g-~---~~v-~~~~~~~~~~~~~~~d~v~d~~g~  222 (327)
                      +|.|+|++|.+|..++.+++ ..+ ..+.+..+..+.....+.++. +   ... ......+ .....+.|+++-+.|.
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~-~~~~~~aDvvvitaG~   79 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDA-TPALEGADVVLISAGV   79 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCC-HHHHTTCSEEEECCSC
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCC-ccccCCCCEEEECCCc
Confidence            58899988999988777554 322 334444444433333333332 1   111 1111222 3356788999877763

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=83.24  E-value=2.9  Score=31.97  Aligned_cols=89  Identities=19%  Similarity=0.221  Sum_probs=52.7

Q ss_pred             EEEEEcCCchHHH-HHHHHHHhhcCCcEEEEe-CCcccH-HHHHHcCCCE--EEeCCCCChhhhc--cCccEEEeCCCCc
Q 020320          151 TIFIVGGAGGVGT-LVIQLAKHFYGASHVVAT-TSTPKV-EFVKELGADK--VIDYRKTKYEDIE--EKFDVLYDTIGDC  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~-~a~~la~~~~g~~~v~~~-~~~~~~-~~~~~~g~~~--v~~~~~~~~~~~~--~~~d~v~d~~g~~  223 (327)
                      +|.|+| +|.+|. ..+...+...+.+++.++ +++++. ..+++++.+.  +..+  .++.+.+  ..+|+|+-++...
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~--~d~~ell~~~~iD~V~I~tp~~  111 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDY--SNFDKIAKDPKIDAVYIILPNS  111 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECS--SSGGGGGGCTTCCEEEECSCGG
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhcccccccccc--Cchhhhcccccceeeeeccchh
Confidence            678999 899986 344444544467777665 566654 4446777532  2222  2233333  4689999888743


Q ss_pred             ---hhhhhhhcCCCcEEEeeCCC
Q 020320          224 ---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       224 ---~~~~~~l~~~g~~v~~g~~~  243 (327)
                         ..+..++..+ +-+.+..+.
T Consensus       112 ~H~~~~~~al~~g-k~v~~EKPl  133 (221)
T d1h6da1         112 LHAEFAIRAFKAG-KHVMCEKPM  133 (221)
T ss_dssp             GHHHHHHHHHHTT-CEEEECSSC
T ss_pred             hhhhHHHHhhhcc-hhhhcCCCc
Confidence               4566677655 445555443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=83.18  E-value=1.5  Score=31.32  Aligned_cols=51  Identities=27%  Similarity=0.251  Sum_probs=39.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      ++|.|+|+.|.+|...+..++.. |..+.+.++++.........+++.++..
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~v~~~   60 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRAS-GYPISILDREDWAVAESILANADVVIVS   60 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTCGGGHHHHHTTCSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHc-CCCcEecccccccccchhhhhccccccc
Confidence            57999998899999988888877 9999999887665554444556665543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.96  E-value=0.97  Score=31.24  Aligned_cols=33  Identities=21%  Similarity=0.178  Sum_probs=28.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      .++++|+| +|.+|+-.+++++.+ |.++.++.++
T Consensus        20 P~~vvIIG-gG~iG~E~A~~l~~l-G~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVG-ASYVALECAGFLAGI-GLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred             CCeEEEEC-CCccHHHHHHHHhhc-CCeEEEEEec
Confidence            46899999 899999999999999 9988888754

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=82.86  E-value=6.8  Score=28.41  Aligned_cols=92  Identities=17%  Similarity=0.209  Sum_probs=52.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC--CcccHHHHHHc----C---CCEE-------EeC------CCCChhh
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATT--STPKVEFVKEL----G---ADKV-------IDY------RKTKYED  208 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~--~~~~~~~~~~~----g---~~~v-------~~~------~~~~~~~  208 (327)
                      +|.|.| .|-+|.++..++......+++++-.  +.+...++-++    |   .+.-       ++.      +..+..+
T Consensus         3 kigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~   81 (166)
T d1gado1           3 KVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN   81 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence            578888 9999999999887763344443333  22233344332    1   1111       110      0111111


Q ss_pred             h---ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          209 I---EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       209 ~---~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      .   ..++|+|+||+|..   ..+...+..+.+-|.+..+.
T Consensus        82 i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          82 LKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             GCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             CCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence            1   12799999999954   55667777787777776554

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.73  E-value=0.84  Score=36.68  Aligned_cols=91  Identities=14%  Similarity=0.197  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC-C------------C---EEEeCCCCChhhhc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG-A------------D---KVIDYRKTKYEDIE  210 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g-~------------~---~v~~~~~~~~~~~~  210 (327)
                      ...++|||+|+.  .|..+-++++.- ..++.++.-+++-.+.++++- .            +   .++..+...+.+..
T Consensus        71 ~~p~~vLiiG~G--~G~~~~~~l~~~-~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~  147 (276)
T d1mjfa_          71 PKPKRVLVIGGG--DGGTVREVLQHD-VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNN  147 (276)
T ss_dssp             SCCCEEEEEECT--TSHHHHHHTTSC-CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHC
T ss_pred             CCCceEEEecCC--chHHHHHHHHhC-CceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhcc
Confidence            345789999843  334445556643 455666667777777776532 1            1   12322222233334


Q ss_pred             cCccEEE-eCCCCc------------hhhhhhhcCCCcEEEee
Q 020320          211 EKFDVLY-DTIGDC------------KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       211 ~~~d~v~-d~~g~~------------~~~~~~l~~~g~~v~~g  240 (327)
                      +++|+++ |.....            ..+.++|+++|.++.-.
T Consensus       148 ~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         148 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            6799998 665321            34567899999887643

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=82.68  E-value=1.8  Score=33.90  Aligned_cols=34  Identities=26%  Similarity=0.438  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT  182 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~  182 (327)
                      -.|.+|+|.| .|.+|..+++++..+ |++++.+..
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~-Gakvv~vsD   62 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKM-GAKVIAVSD   62 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEEC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEeec
Confidence            4789999999 999999999999998 999987774

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=82.63  E-value=1.2  Score=31.15  Aligned_cols=38  Identities=16%  Similarity=0.234  Sum_probs=31.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .++++++++|.| +|.+|+-++..++.+ |.++.++.+.+
T Consensus        31 ~~~~~k~v~VIG-gG~iG~E~A~~l~~~-g~~Vtvie~~~   68 (133)
T d1q1ra2          31 QLIADNRLVVIG-GGYIGLEVAATAIKA-NMHVTLLDTAA   68 (133)
T ss_dssp             TCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             hhccCCEEEEEC-CchHHHHHHHHHHhh-Ccceeeeeecc
Confidence            345678999999 899999999999988 99888887543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.47  E-value=1.2  Score=30.95  Aligned_cols=36  Identities=17%  Similarity=0.261  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      +..++++|.| +|.+|+=+++.++.+ |.++.++.+.+
T Consensus        24 ~~p~~vvIiG-gG~IG~E~A~~~~~~-G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIG-GGIIGLEMGTVYSTL-GSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEES-CSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred             ccCCeEEEEC-CCHHHHHHHHHhhcC-CCEEEEEEeec
Confidence            3458999999 899999999999998 99988887644

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=82.41  E-value=0.87  Score=37.26  Aligned_cols=34  Identities=24%  Similarity=0.314  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .++|+|+| +|..|+.++..+... |.++.+...++
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~-G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEK-GHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhC-CCCEEEEECCC
Confidence            57899999 899999999998887 88888887654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.33  E-value=0.73  Score=37.93  Aligned_cols=33  Identities=15%  Similarity=0.196  Sum_probs=28.6

Q ss_pred             EE-EEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          151 TI-FIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       151 ~v-lI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      +| ||+||+|-+|..++..+... |.+++++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~-g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEK-GYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHC-cCEEEEEECCC
Confidence            57 99999999999998888888 99999998643

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.32  E-value=0.83  Score=36.98  Aligned_cols=35  Identities=20%  Similarity=0.365  Sum_probs=29.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      +...+|+|+| +|..|+.|+..++.. |.+|.+...+
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~~-G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQSF-GMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhC-CCCEEEEeCC
Confidence            4556799999 899999999998888 8888877654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.30  E-value=1.2  Score=30.75  Aligned_cols=34  Identities=18%  Similarity=0.287  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .++++|+| +|.+|+-+++++..+ |.++-++.+.+
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~l-G~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRL-GSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhh-CcceeEEEecc
Confidence            37899999 899999999999998 99988887644

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.30  E-value=1  Score=30.76  Aligned_cols=34  Identities=21%  Similarity=0.268  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .++++|.| +|.+|+-+++.++.+ |.++.++.+.+
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~-G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGL-GAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhcc-ccEEEEEeecc
Confidence            47899999 899999999999988 99887777654

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=82.25  E-value=2.4  Score=34.29  Aligned_cols=59  Identities=19%  Similarity=0.250  Sum_probs=43.4

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---CcccHHHHHHcCCCEEEe
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---STPKVEFVKELGADKVID  200 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---~~~~~~~~~~~g~~~v~~  200 (327)
                      +.+...+.+++.|+.. .+|.-|++++..++.+ |.+.+++..   ++.+....+.+|++.+..
T Consensus        52 a~~~g~~~~~~~vv~~-SsGN~g~a~A~~a~~~-G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~  113 (310)
T d1y7la1          52 AEKDGTLTKGKEIVDA-TSGNTGIALAYVAAAR-GYKITLTMPETMSLERKRLLCGLGVNLVLT  113 (310)
T ss_dssp             HHHTTSSCTTCEEEES-CCSHHHHHHHHHHHHH-TCCEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             HHHcCCCCCCceeeee-cCCCchHHHHHHHHHh-hccccccchhhhhhhhhhhHHHhCCceEec
Confidence            3344556777665554 4999999999999998 988777763   455777778899877653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.22  E-value=0.78  Score=37.54  Aligned_cols=33  Identities=15%  Similarity=0.119  Sum_probs=29.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      +++||+||+|-+|...+..+... |.+|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~-g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGK-GYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHC-cCEEEEEECC
Confidence            67999999999999998888888 9999999863

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=82.12  E-value=6.8  Score=27.94  Aligned_cols=105  Identities=13%  Similarity=0.082  Sum_probs=62.0

Q ss_pred             EEEEEcCCchHHHH-HHHHHHhhcCCcEEEEe-CCcccH-HHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---h
Q 020320          151 TIFIVGGAGGVGTL-VIQLAKHFYGASHVVAT-TSTPKV-EFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---K  224 (327)
Q Consensus       151 ~vlI~ga~g~~G~~-a~~la~~~~g~~~v~~~-~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~  224 (327)
                      +|.|.| +|.+|.- .....+...+.+++.+. .++++. ..+++++... .    +.+......+|+|+-++...   .
T Consensus         3 ri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~----~~~~~l~~~~D~V~I~tp~~~h~~   76 (164)
T d1tlta1           3 RIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-A----DSLSSLAASCDAVFVHSSTASHFD   76 (164)
T ss_dssp             EEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-C----SSHHHHHTTCSEEEECSCTTHHHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-c----ccchhhhhhcccccccccchhccc
Confidence            578999 8999864 45666655466777665 455554 4456777642 1    22334446799999887633   4


Q ss_pred             hhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCc
Q 020320          225 NSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKL  272 (327)
Q Consensus       225 ~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~  272 (327)
                      .+..++..+ +-+.+..|..          .+.+..++++++.++...
T Consensus        77 ~~~~al~~g-k~V~~EKPla----------~~~~e~~~l~~~a~~~~~  113 (164)
T d1tlta1          77 VVSTLLNAG-VHVCVDKPLA----------ENLRDAERLVELAARKKL  113 (164)
T ss_dssp             HHHHHHHTT-CEEEEESSSC----------SSHHHHHHHHHHHHHTTC
T ss_pred             ccccccccc-ceeecccccc----------CCHHHHHHHHHHHHHcCC
Confidence            455666665 4455655442          223445555555555443

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.95  E-value=0.85  Score=35.90  Aligned_cols=32  Identities=25%  Similarity=0.266  Sum_probs=26.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCc
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTST  184 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~  184 (327)
                      .|+|+| +|+.|++++..++.. |. ++.+..+++
T Consensus         3 ~V~IvG-aG~aGl~~A~~L~~~-Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAG-AGIGGLSCALALHQA-GIGKVTLLESSS   35 (288)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESSS
T ss_pred             EEEEEC-cCHHHHHHHHHHHhC-CCCeEEEEeCCC
Confidence            589999 899999999999988 86 666666543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.93  E-value=0.81  Score=37.64  Aligned_cols=34  Identities=18%  Similarity=0.209  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT  182 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~  182 (327)
                      .-+++||+||+|-+|...+..+... |.+++++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~-g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKL-DQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEEC
Confidence            3468999999999999999988888 999998874

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.76  E-value=1.2  Score=30.72  Aligned_cols=34  Identities=18%  Similarity=0.243  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .++++|.| +|.+|+-++..++.+ |.++.++.+++
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~-G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSAL-GSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcC-CcEEEEEeecc
Confidence            37899999 899999999999998 99988887654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.73  E-value=2.2  Score=30.46  Aligned_cols=73  Identities=18%  Similarity=0.142  Sum_probs=42.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccH-HHHHHcC------CCEEEeCCCCChhhhccCccEEEe
Q 020320          147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKV-EFVKELG------ADKVIDYRKTKYEDIEEKFDVLYD  218 (327)
Q Consensus       147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~-~~~~~~g------~~~v~~~~~~~~~~~~~~~d~v~d  218 (327)
                      ..+.+|.|.| +|.+|..+++.+...+-+ +++..+.++++. ..+.++.      ...+.... .+ .+...+.|+++-
T Consensus         4 ~~~~KI~IiG-aG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~-~d-~~~l~daDvvvi   80 (148)
T d1ldna1           4 NGGARVVVIG-AGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-GD-YDDCRDADLVVI   80 (148)
T ss_dssp             TTSCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-CC-GGGTTTCSEEEE
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEE-CC-HHHhccceeEEE
Confidence            4567899999 699999988888776223 455555565542 2222221      11111111 12 245678899998


Q ss_pred             CCCC
Q 020320          219 TIGD  222 (327)
Q Consensus       219 ~~g~  222 (327)
                      +.|.
T Consensus        81 tag~   84 (148)
T d1ldna1          81 CAGA   84 (148)
T ss_dssp             CCSC
T ss_pred             eccc
Confidence            8774

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=81.68  E-value=1.7  Score=32.20  Aligned_cols=71  Identities=20%  Similarity=0.263  Sum_probs=42.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc---cHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP---KVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC  223 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~---~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  223 (327)
                      +|.|+||+|-+|.-.++++..+...++..+..+..   +.... ..+-.+..+.  ..+......+.|++|-+.+..
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~--~~~~~~~~~~~dvvf~a~p~~   77 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILS--EFDPEKVSKNCDVLFTALPAG   77 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCB--CCCHHHHHHHCSEEEECCSTT
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhcccccc--ccCHhHhccccceEEEccccH
Confidence            58899999999999999988775566665553322   22221 1121221121  122233335799999888743

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=81.49  E-value=7.8  Score=28.17  Aligned_cols=91  Identities=23%  Similarity=0.266  Sum_probs=55.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC---cccHHHHHHcC-------CCEEE-------eC------CCCChh
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS---TPKVEFVKELG-------ADKVI-------DY------RKTKYE  207 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~---~~~~~~~~~~g-------~~~v~-------~~------~~~~~~  207 (327)
                      +|.|.| .|-+|.++...+... +.+++.+-..   .+...++-++.       .+...       +.      +..+..
T Consensus         2 kIgING-fGRIGR~~~R~~~~~-~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~   79 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEM-GAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPE   79 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhC-CCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChH
Confidence            578898 999999999988887 7766655432   23444444432       11111       10      001111


Q ss_pred             hh---ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320          208 DI---EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP  243 (327)
Q Consensus       208 ~~---~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~  243 (327)
                      +.   ..++|+|+||+|..   ..+...+..+.+-|.+..+.
T Consensus        80 ~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          80 NIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             GCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             HCCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence            11   12799999999954   55666777777777776554

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=81.38  E-value=1.4  Score=29.94  Aligned_cols=34  Identities=24%  Similarity=0.322  Sum_probs=28.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      .++++|.| +|.+|+-+++.++.+ |.++.++.+.+
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~-g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKL-GAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhc-ccceEEEeeec
Confidence            37899999 899999999999998 99887776543

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=81.23  E-value=1.1  Score=32.50  Aligned_cols=35  Identities=20%  Similarity=0.341  Sum_probs=26.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTST  184 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~  184 (327)
                      .|++|+|+| +|..|+.++..++.+ +.  ++.++...+
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~-~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLA-DPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHH-CTTSEEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHc-CCCCcEEEEECCC
Confidence            478999999 899999998888887 53  455554443

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.07  E-value=1.4  Score=30.76  Aligned_cols=30  Identities=23%  Similarity=0.275  Sum_probs=25.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEe
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVAT  181 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~  181 (327)
                      +|.|+|++|-+|++..++++.. +.+.+...
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~-~~~l~~~i   31 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEK-GHELVLKV   31 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcC-CCeEEEEE
Confidence            5899998999999999998887 77766554

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=80.97  E-value=0.97  Score=34.36  Aligned_cols=31  Identities=19%  Similarity=0.304  Sum_probs=26.8

Q ss_pred             EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320          152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTST  184 (327)
Q Consensus       152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~  184 (327)
                      |+|+| +|+.|+.++..+..+ |.+++++...+
T Consensus         6 vvVIG-gGpaGl~aA~~aa~~-G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIG-GGPGGYVAAIKAAQL-GFKTTCIEKRG   36 (221)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHH-TCCEEEEECSS
T ss_pred             EEEEC-CCHHHHHHHHHHHHC-CCcEEEEEecC
Confidence            78888 899999999999988 99999987643

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=80.85  E-value=1  Score=31.12  Aligned_cols=36  Identities=17%  Similarity=0.288  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      ..++++|.| +|.+|+-++++++.+ |.++-++.+++.
T Consensus        24 ~p~~~viiG-~G~iglE~A~~~~~~-G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIG-AGYIGLEMGSVWGRI-GSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESC-CSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred             cCCeEEEEc-cchHHHHHHHHHHhc-CCeEEEEEEccc
Confidence            457899999 899999999999999 998888876543

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=80.85  E-value=3.6  Score=28.39  Aligned_cols=61  Identities=21%  Similarity=0.342  Sum_probs=45.2

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320          140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDY  201 (327)
Q Consensus       140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~  201 (327)
                      .++.++++.-+.+++.-..-..-+.+++++|.+ +. ++++.+.+++..+.++++|++.++++
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~-~~~~iI~~~~~~~~~~~l~~~G~d~vi~p  118 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSY-GINKTIARISEIEYKDVFERLGVDVVVSP  118 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHT-TCCCEEEECSSTTHHHHHHHTTCSEEECH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHc-CCceEEEEecCHHHHHHHHHCCCCEEECH
Confidence            356778877777766543455567888899988 65 56666678888889999999998864

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=80.75  E-value=1.1  Score=35.89  Aligned_cols=94  Identities=16%  Similarity=0.146  Sum_probs=60.2

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cCCCEEE-eCCCCChhhhccCccEEE
Q 020320          144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LGADKVI-DYRKTKYEDIEEKFDVLY  217 (327)
Q Consensus       144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g~~~v~-~~~~~~~~~~~~~~d~v~  217 (327)
                      .++..+.+||=+| || .|..+..+++... +.+++.++.++...+.+++    .+.+..+ ..+...+ .....+|+|+
T Consensus        23 ~~~~~~~~ILDiG-cG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~-~~~~~fD~v~   99 (281)
T d2gh1a1          23 WKITKPVHIVDYG-CG-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAI   99 (281)
T ss_dssp             SCCCSCCEEEEET-CT-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC-CCSSCEEEEE
T ss_pred             hccCCcCEEEEec-Cc-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc-cccCCceEEE
Confidence            3567778898888 76 4888888888652 4678888889887777754    3332212 1111111 1124689988


Q ss_pred             eCCC-----Cc----hhhhhhhcCCCcEEEee
Q 020320          218 DTIG-----DC----KNSFVVAKDNAPIVDIT  240 (327)
Q Consensus       218 d~~g-----~~----~~~~~~l~~~g~~v~~g  240 (327)
                      ..-.     ..    ..+.+.|+|||.++...
T Consensus       100 ~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1         100 CHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             EESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            5432     11    45678899999988765

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=80.61  E-value=0.88  Score=35.70  Aligned_cols=33  Identities=24%  Similarity=0.355  Sum_probs=27.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      -|+|+| +|+.|++++..+... |.++.++.+++.
T Consensus         6 DViIIG-aG~aGl~aA~~la~~-G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIG-AGAAGLFCAAQLAKL-GKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred             cEEEEC-cCHHHHHHHHHHHHC-CCcEEEEecCCC
Confidence            378999 899999988888877 999998887654

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.43  E-value=4  Score=32.60  Aligned_cols=60  Identities=22%  Similarity=0.278  Sum_probs=43.9

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---CcccHHHHHHcCCCEEE
Q 020320          138 IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---STPKVEFVKELGADKVI  199 (327)
Q Consensus       138 ~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---~~~~~~~~~~~g~~~v~  199 (327)
                      +++++....+++..++..+ +|..|.+++..++.+ |.+.+++..   ++.+...++.+|++.+.
T Consensus        50 ~~a~~~g~~~~~~~vv~as-sGn~g~a~A~~a~~~-g~~~~i~~p~~~~~~k~~~~~~~ga~v~~  112 (302)
T d1fcja_          50 WDAEKRGVLKPGVELVEPT-NGNTGIALAYVAAAR-GYKLTLTMPETMSIERRKLLKALGANLVL  112 (302)
T ss_dssp             HHHHHHTCCCTTCEEEEEC-SSHHHHHHHHHHHHH-TCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             HHHHHcCCCCCCceEEEec-cccchhHHHHHHHHh-ccCCceEEeecCcHHHHHHHHHhccceEE
Confidence            3445566777777655554 999999999999998 888777763   55577777888876543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=80.25  E-value=0.95  Score=37.61  Aligned_cols=33  Identities=15%  Similarity=0.165  Sum_probs=28.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320          150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS  183 (327)
Q Consensus       150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~  183 (327)
                      +.+||+||+|-+|..++..+... |.+|+++++.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~-g~~V~~~~r~   34 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEK-GYEVHGIKRR   34 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECC-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence            67899999999999988888887 8999988864

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=80.08  E-value=0.94  Score=35.21  Aligned_cols=32  Identities=19%  Similarity=0.332  Sum_probs=26.7

Q ss_pred             EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320          152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP  185 (327)
Q Consensus       152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~  185 (327)
                      |+|+| +|+.|++++..+... |.+++++.+++.
T Consensus         5 ViIIG-aG~aGl~aA~~la~~-G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEE-GANVLLLDKGNK   36 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHC-CCcEEEEeCCCC
Confidence            78999 899999888777777 999999986543

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=80.03  E-value=1.4  Score=32.31  Aligned_cols=80  Identities=21%  Similarity=0.189  Sum_probs=50.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---hhh
Q 020320          151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---KNS  226 (327)
Q Consensus       151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~~~  226 (327)
                      +|.|+| +|.+|...+..++...+.+++.+. +++++.      ....+...  .+.......+|+++.+++..   ..+
T Consensus         5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------~~~~~~~~--~~~~~~~~~~D~Vvi~tp~~~h~~~a   75 (170)
T d1f06a1           5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------TKTPVFDV--ADVDKHADDVDVLFLCMGSATDIPEQ   75 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------SSSCEEEG--GGGGGTTTTCSEEEECSCTTTHHHHH
T ss_pred             eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccc------cccccccc--hhhhhhccccceEEEeCCCcccHHHH
Confidence            688999 999999888888876566666555 343321      11122221  12333446799999998743   566


Q ss_pred             hhhhcCCCcEEEe
Q 020320          227 FVVAKDNAPIVDI  239 (327)
Q Consensus       227 ~~~l~~~g~~v~~  239 (327)
                      ..+++.|..++..
T Consensus        76 ~~aL~aG~~vv~~   88 (170)
T d1f06a1          76 APKFAQFACTVDT   88 (170)
T ss_dssp             HHHHTTTSEEECC
T ss_pred             HHHHHCCCcEEEe
Confidence            7788887776543